K04M3_38240 33d63b588afdf4a52e4e25ca3404598d 497 SUPERFAMILY SSF53720 2 484 2.62E-145 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_38240 33d63b588afdf4a52e4e25ca3404598d 497 Gene3D G3DSA:3.40.605.10 24 458 3.6E-144 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_38240 33d63b588afdf4a52e4e25ca3404598d 497 Gene3D G3DSA:3.40.309.10 250 450 3.6E-144 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_38240 33d63b588afdf4a52e4e25ca3404598d 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_38240 33d63b588afdf4a52e4e25ca3404598d 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 5.4E-138 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_38240 33d63b588afdf4a52e4e25ca3404598d 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 1.3E-240 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 K04M3_36740 267136263bd0b0baacdab6f8176f61ae 423 Gene3D G3DSA:3.20.20.10 54 284 9.9E-135 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_36740 267136263bd0b0baacdab6f8176f61ae 423 Pfam PF01168 Alanine racemase, N-terminal domain 51 259 3.0E-15 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_36740 267136263bd0b0baacdab6f8176f61ae 423 Pfam PF14031 Putative serine dehydratase domain 314 408 1.1E-13 T 12-10-2018 IPR026956 D-serine dehydratase-like domain K04M3_36740 267136263bd0b0baacdab6f8176f61ae 423 SUPERFAMILY SSF51419 52 283 3.11E-31 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_36740 267136263bd0b0baacdab6f8176f61ae 423 SMART SM01119 314 410 3.6E-29 T 12-10-2018 IPR026956 D-serine dehydratase-like domain K04M3_36740 267136263bd0b0baacdab6f8176f61ae 423 Gene3D G3DSA:2.40.37.20 38 423 9.9E-135 T 12-10-2018 K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 8.7E-19 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 Gene3D G3DSA:3.30.70.920 54 150 1.0E-18 T 12-10-2018 K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 SMART SM00344 3 112 2.1E-36 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 SUPERFAMILY SSF54909 66 147 1.18E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 SUPERFAMILY SSF46785 2 59 2.24E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 Gene3D G3DSA:1.10.10.10 4 53 5.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46210 04adcb8a195f0a47bf31a9895d6a00fb 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.9E-18 T 12-10-2018 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Gene3D G3DSA:1.10.260.30 328 453 8.0E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Gene3D G3DSA:3.40.50.300 90 285 1.7E-122 T 12-10-2018 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.3E-73 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 SMART SM00962 100 296 1.4E-114 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 SUPERFAMILY SSF52540 42 353 6.11E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 3.5E-179 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.126 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 8.2E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Pfam PF02978 Signal peptide binding domain 329 427 3.7E-33 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 Gene3D G3DSA:1.20.120.140 4 305 1.7E-122 T 12-10-2018 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 SMART SM00382 99 247 9.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 SMART SM00963 1 86 2.2E-35 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_26380 8429eceedb4e3eb8ed1e1b3e33fdade0 460 SUPERFAMILY SSF47446 329 430 7.52E-38 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.8E-45 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 5 233 1.1E-179 T 12-10-2018 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 103 372 1.1E-179 T 12-10-2018 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 PIRSF PIRSF000497 1 381 1.1E-174 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 11 270 1.1E-179 T 12-10-2018 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 2.8E-197 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.7E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 233 382 1.45E-70 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.024 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 111 232 2.12E-51 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_27170 1ca178101fb0640c53393799a4e57026 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 K04M3_14270 b9217ecd67e357fb04a3133aabf6e6ab 529 Pfam PF07508 Recombinase 194 285 8.4E-13 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 K04M3_14270 b9217ecd67e357fb04a3133aabf6e6ab 529 Gene3D G3DSA:3.40.50.1390 1 171 3.3E-26 T 12-10-2018 K04M3_14270 b9217ecd67e357fb04a3133aabf6e6ab 529 Pfam PF00239 Resolvase, N terminal domain 4 160 8.3E-17 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_14270 b9217ecd67e357fb04a3133aabf6e6ab 529 SUPERFAMILY SSF53041 3 159 6.28E-13 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 K04M3_14270 b9217ecd67e357fb04a3133aabf6e6ab 529 SMART SM00857 4 165 1.5E-16 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_35410 2f2946a995dd03ed14286ffd4a803739 318 Gene3D G3DSA:3.40.50.300 17 183 1.1E-46 T 12-10-2018 K04M3_35410 2f2946a995dd03ed14286ffd4a803739 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-62 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 K04M3_35410 2f2946a995dd03ed14286ffd4a803739 318 SUPERFAMILY SSF52540 6 290 2.78E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35410 2f2946a995dd03ed14286ffd4a803739 318 PIRSF PIRSF002849 1 318 6.6E-129 T 12-10-2018 K04M3_35410 2f2946a995dd03ed14286ffd4a803739 318 Gene3D G3DSA:1.10.8.300 199 315 1.5E-39 T 12-10-2018 K04M3_36120 de42dd1ad85cec23fae602f5620211d9 260 Pfam PF00005 ABC transporter 21 170 3.7E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_36120 de42dd1ad85cec23fae602f5620211d9 260 Gene3D G3DSA:3.40.50.300 1 259 3.0E-63 T 12-10-2018 K04M3_36120 de42dd1ad85cec23fae602f5620211d9 260 SMART SM00382 30 219 5.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_36120 de42dd1ad85cec23fae602f5620211d9 260 SUPERFAMILY SSF52540 5 233 2.06E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 Gene3D G3DSA:1.20.5.570 584 617 4.5E-15 T 12-10-2018 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 SUPERFAMILY SSF143968 323 461 4.32E-52 T 12-10-2018 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 SUPERFAMILY SSF50475 3 322 2.2E-122 T 12-10-2018 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 1.1E-164 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 Gene3D G3DSA:3.40.1670.10 337 453 7.1E-46 T 12-10-2018 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 Gene3D G3DSA:3.40.1670.10 479 583 5.3E-26 T 12-10-2018 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.8E-161 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 567 4.5E-22 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 K04M3_31440 0ea634a3d16ced19afd423c0475b90c5 617 SUPERFAMILY SSF143968 473 615 1.03E-36 T 12-10-2018 K04M3_09710 2764a847415b16bb93a8845e10e2747b 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 6.7E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_09710 2764a847415b16bb93a8845e10e2747b 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 4.6E-158 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 K04M3_09710 2764a847415b16bb93a8845e10e2747b 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 4.6E-216 T 12-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 K04M3_09710 2764a847415b16bb93a8845e10e2747b 414 Pfam PF02687 FtsX-like permease family 301 407 1.2E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 SUPERFAMILY SSF56059 98 288 4.6E-51 T 12-10-2018 K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.7E-67 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.396 T 12-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 Gene3D G3DSA:3.40.50.20 1 114 8.6E-41 T 12-10-2018 K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 Gene3D G3DSA:3.30.1490.20 115 181 1.9E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 5.2E-85 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 K04M3_48090 632b9d84533b6bfd22d65c66f7b46768 301 Gene3D G3DSA:3.30.470.80 182 299 7.4E-43 T 12-10-2018 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-130 T 12-10-2018 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.647 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 SUPERFAMILY SSF47917 383 511 2.07E-45 T 12-10-2018 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 7.0E-251 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 SUPERFAMILY SSF52540 96 381 1.26E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Gene3D G3DSA:2.40.30.20 1 93 5.3E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Gene3D G3DSA:1.20.150.20 383 513 7.0E-48 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 3.4E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32250 430c1b9e5c17ab35bf8a1aa6f12c7ad8 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.0E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 6.7E-25 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 1.6E-49 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 Gene3D G3DSA:3.40.50.970 363 554 1.7E-55 T 12-10-2018 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 2.0E-40 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 Gene3D G3DSA:3.40.50.1220 187 350 1.5E-32 T 12-10-2018 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 Gene3D G3DSA:3.40.50.970 2 181 1.9E-63 T 12-10-2018 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 547 1.8E-262 T 12-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 SUPERFAMILY SSF52518 8 182 5.89E-47 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 SUPERFAMILY SSF52467 188 341 4.78E-32 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_43980 2cb13c71e8d3a2b8e99baf7112863927 567 SUPERFAMILY SSF52518 367 554 2.75E-51 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_39690 0839663e81d158ee7fee476f3856518b 118 Pfam PF08291 Peptidase M15 6 104 4.1E-14 T 12-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 K04M3_39690 0839663e81d158ee7fee476f3856518b 118 Gene3D G3DSA:3.30.1380.10 13 116 8.3E-13 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_39690 0839663e81d158ee7fee476f3856518b 118 SUPERFAMILY SSF55166 7 109 1.86E-18 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 SMART SM00387 321 430 3.9E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 Gene3D G3DSA:1.10.287.130 167 277 2.6E-23 T 12-10-2018 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 SMART SM00388 222 282 8.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 SMART SM00304 169 221 1.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 Gene3D G3DSA:3.30.565.10 284 430 3.3E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 SUPERFAMILY SSF55874 284 429 7.2E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 428 7.1E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_01410 036dba40edf1713fdf36f3ef4d357e86 430 Pfam PF00672 HAMP domain 169 217 1.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_38810 75372040c4a05c2bb6f871290dd5a047 317 SUPERFAMILY SSF52418 73 311 1.73E-42 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_38810 75372040c4a05c2bb6f871290dd5a047 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 7.0E-11 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_38810 75372040c4a05c2bb6f871290dd5a047 317 Gene3D G3DSA:3.40.1030.10 72 312 2.4E-41 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_38810 75372040c4a05c2bb6f871290dd5a047 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 253 6.1E-5 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_38810 75372040c4a05c2bb6f871290dd5a047 317 SUPERFAMILY SSF47648 8 72 6.41E-15 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_38810 75372040c4a05c2bb6f871290dd5a047 317 Gene3D G3DSA:1.20.970.10 3 71 9.2E-16 T 12-10-2018 K04M3_32710 abe7f5877a9bed77861a7d2159a30bf0 177 Gene3D G3DSA:3.40.630.30 1 175 1.8E-40 T 12-10-2018 K04M3_32710 abe7f5877a9bed77861a7d2159a30bf0 177 SUPERFAMILY SSF55729 2 174 2.32E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_32710 abe7f5877a9bed77861a7d2159a30bf0 177 Pfam PF13302 Acetyltransferase (GNAT) domain 5 149 4.5E-22 T 12-10-2018 IPR000182 GNAT domain K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.81 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 9.8E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 Gene3D G3DSA:3.30.70.20 138 223 3.8E-10 T 12-10-2018 K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 6.3E-78 T 12-10-2018 IPR004494 MauM/NapG ferredoxin-type protein K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 SUPERFAMILY SSF54862 63 209 3.24E-24 T 12-10-2018 K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 Gene3D G3DSA:3.30.70.20 60 136 6.3E-10 T 12-10-2018 K04M3_35060 32ed9e7a0219606d402b562d31ff9844 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 0.0012 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_00670 5fe2033b4abed51cad6c34ab4f2442d6 175 Pfam PF00210 Ferritin-like domain 8 143 4.3E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 K04M3_00670 5fe2033b4abed51cad6c34ab4f2442d6 175 Gene3D G3DSA:1.20.1260.10 1 175 1.2E-53 T 12-10-2018 IPR012347 Ferritin-like K04M3_00670 5fe2033b4abed51cad6c34ab4f2442d6 175 SUPERFAMILY SSF47240 1 160 1.18E-58 T 12-10-2018 IPR009078 Ferritin-like superfamily K04M3_04490 704472841a258799647b41a944e49e0f 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 4.1E-102 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_04490 704472841a258799647b41a944e49e0f 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.8E-48 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 K04M3_04490 704472841a258799647b41a944e49e0f 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.863 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_04490 704472841a258799647b41a944e49e0f 231 SUPERFAMILY SSF53167 1 229 8.51E-74 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 K04M3_04490 704472841a258799647b41a944e49e0f 231 Gene3D G3DSA:3.40.50.1580 1 231 3.7E-71 T 12-10-2018 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 SUPERFAMILY SSF52172 456 572 5.12E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 SUPERFAMILY SSF55874 268 436 1.24E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 Pfam PF00072 Response regulator receiver domain 459 570 6.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 2.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 4.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 4.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 4.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 4.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 Gene3D G3DSA:3.30.565.10 278 439 1.7E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 Gene3D G3DSA:1.10.287.130 180 277 5.9E-27 T 12-10-2018 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 2.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 SMART SM00388 214 279 6.5E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 SMART SM00448 456 569 9.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 SMART SM00387 326 437 4.9E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 Gene3D G3DSA:3.40.50.2300 440 573 3.0E-40 T 12-10-2018 K04M3_16200 cc5d97a6a7e3c02b3732d73cb0cf4654 573 SUPERFAMILY SSF47384 200 280 2.75E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_15680 8ee61f5167edc1a2e74196d6fb8c6356 137 Gene3D G3DSA:3.90.79.10 3 131 1.2E-12 T 12-10-2018 K04M3_15680 8ee61f5167edc1a2e74196d6fb8c6356 137 SUPERFAMILY SSF55811 8 112 5.28E-16 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_15680 8ee61f5167edc1a2e74196d6fb8c6356 137 Pfam PF00293 NUDIX domain 8 111 9.2E-9 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SUPERFAMILY SSF52540 229 486 1.53E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 Pfam PF01381 Helix-turn-helix 15 73 5.1E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00028 686 719 190.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00028 726 759 430.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00028 649 682 0.003 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00028 766 799 0.15 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00028 886 919 100.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00028 613 646 480.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SUPERFAMILY SSF47413 13 75 3.1E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 Gene3D G3DSA:1.10.260.40 12 77 1.1E-9 T 12-10-2018 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SMART SM00530 14 73 2.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 Gene3D G3DSA:1.25.40.10 612 725 7.4E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SUPERFAMILY SSF48452 696 912 1.59E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 SUPERFAMILY SSF48452 620 755 5.04E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_44680 e3aed20f1e9c627c1080e7e7e3c99ccb 1057 Pfam PF13191 AAA ATPase domain 237 412 2.9E-12 T 12-10-2018 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 PIRSF PIRSF004486 1 316 1.7E-101 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 Gene3D G3DSA:3.40.50.150 10 315 1.4E-101 T 12-10-2018 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 SUPERFAMILY SSF81799 113 216 6.41E-31 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.086 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 Pfam PF01795 MraW methylase family 5 315 6.9E-111 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 Gene3D G3DSA:1.10.150.170 112 218 1.4E-101 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 SUPERFAMILY SSF53335 7 316 1.81E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_04220 5a0063fd883be2c593d1d2d3a59526cf 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 1.9E-119 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 454 7.0E-163 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 SUPERFAMILY SSF81891 182 419 3.14E-48 T 12-10-2018 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 SUPERFAMILY SSF81301 26 181 3.16E-40 T 12-10-2018 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 Pfam PF01743 Poly A polymerase head domain 54 184 5.7E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 447 2.9E-38 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 272 2.5E-21 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 Gene3D G3DSA:3.30.460.10 20 180 1.2E-63 T 12-10-2018 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 10 454 37.715 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 K04M3_26100 5fc95db3f706f1088c04be982a60d86a 455 Gene3D G3DSA:1.10.3090.10 182 432 6.3E-94 T 12-10-2018 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 Gene3D G3DSA:3.40.50.970 1 182 1.0E-73 T 12-10-2018 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 SUPERFAMILY SSF52518 373 567 9.13E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 Gene3D G3DSA:3.40.50.1220 192 362 1.9E-59 T 12-10-2018 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 SUPERFAMILY SSF52467 191 364 1.56E-63 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 1.4E-46 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 2.4E-50 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 3.9E-272 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 9.9E-60 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 SUPERFAMILY SSF52518 2 181 4.12E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_03550 d2a00dc6b828bc38a822c0d3a02df90b 574 Gene3D G3DSA:3.40.50.970 365 574 3.0E-65 T 12-10-2018 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Gene3D G3DSA:1.10.10.650 2 109 9.3E-42 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Gene3D G3DSA:1.10.150.310 499 630 8.9E-50 T 12-10-2018 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 4.6E-56 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Gene3D G3DSA:3.30.420.140 325 451 1.3E-157 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SUPERFAMILY SSF47781 560 632 6.23E-19 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Gene3D G3DSA:1.10.3500.10 112 498 1.3E-157 T 12-10-2018 IPR023323 Tex-like domain superfamily K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 1.7E-71 T 12-10-2018 IPR018974 Tex-like protein, N-terminal K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SUPERFAMILY SSF53098 322 469 5.39E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SUPERFAMILY SSF50249 638 723 1.79E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SUPERFAMILY SSF158832 3 321 9.68E-121 T 12-10-2018 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Gene3D G3DSA:2.40.50.140 631 726 1.3E-29 T 12-10-2018 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SMART SM00316 649 720 5.4E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Pfam PF00575 S1 RNA binding domain 649 720 4.5E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 12-10-2018 K04M3_01360 5ecbf06a821160781741c1d1eb62b18e 773 SMART SM00732 326 424 1.0E-37 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 K04M3_47300 828d481a2875aed950f48524975d62a9 291 Gene3D G3DSA:3.40.190.10 168 259 5.6E-15 T 12-10-2018 K04M3_47300 828d481a2875aed950f48524975d62a9 291 Gene3D G3DSA:1.10.10.10 1 84 1.6E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_47300 828d481a2875aed950f48524975d62a9 291 SUPERFAMILY SSF53850 87 288 1.45E-18 T 12-10-2018 K04M3_47300 828d481a2875aed950f48524975d62a9 291 SUPERFAMILY SSF46785 3 82 5.26E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_47300 828d481a2875aed950f48524975d62a9 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 4.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47300 828d481a2875aed950f48524975d62a9 291 Gene3D G3DSA:3.40.190.10 87 285 5.6E-15 T 12-10-2018 K04M3_47300 828d481a2875aed950f48524975d62a9 291 Pfam PF03466 LysR substrate binding domain 94 288 1.8E-12 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 SUPERFAMILY SSF50494 25 269 6.28E-70 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 SMART SM00020 33 266 8.7E-72 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 Pfam PF00089 Trypsin 34 261 8.4E-60 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 Gene3D G3DSA:2.60.40.10 272 368 2.3E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 Gene3D G3DSA:2.40.10.10 26 271 2.2E-66 T 12-10-2018 K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 4.9E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 4.9E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_08580 8e7b5d698b8f57aca8cca074e63d125b 539 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 122 136 4.9E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.807 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 3.3E-125 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 SMART SM01400 4 121 2.0E-77 T 12-10-2018 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 Gene3D G3DSA:3.40.50.2020 7 302 9.3E-136 T 12-10-2018 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 SUPERFAMILY SSF53271 69 306 2.91E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_07330 516c39be56632c74104053a9d6b7e106 314 Gene3D G3DSA:3.40.50.2020 148 290 9.3E-136 T 12-10-2018 K04M3_07330 516c39be56632c74104053a9d6b7e106 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 Gene3D G3DSA:3.10.310.10 5 272 5.6E-107 T 12-10-2018 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.59 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 Gene3D G3DSA:3.10.310.10 117 263 5.6E-107 T 12-10-2018 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.3E-101 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 SUPERFAMILY SSF54506 2 274 1.26E-53 T 12-10-2018 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 Pfam PF01678 Diaminopimelate epimerase 154 268 5.0E-31 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 K04M3_31270 a6ded8c71c6af2d4306ae123b9c01cdb 276 Pfam PF01678 Diaminopimelate epimerase 5 125 5.8E-34 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 K04M3_29700 8878de42d4173d9ed6c38f05d57aeb8b 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.891 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 K04M3_29700 8878de42d4173d9ed6c38f05d57aeb8b 181 SUPERFAMILY SSF53098 1 180 6.17E-50 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_29700 8878de42d4173d9ed6c38f05d57aeb8b 181 SMART SM00479 7 180 9.9E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_29700 8878de42d4173d9ed6c38f05d57aeb8b 181 Pfam PF00929 Exonuclease 9 170 1.2E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_29700 8878de42d4173d9ed6c38f05d57aeb8b 181 Gene3D G3DSA:3.30.420.10 1 181 1.8E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_06520 a5ec8c828b8c481892e21f16b6ab0f78 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.133 T 12-10-2018 IPR010520 UPF0255 family K04M3_06520 a5ec8c828b8c481892e21f16b6ab0f78 415 SUPERFAMILY SSF53474 47 411 2.34E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_06520 a5ec8c828b8c481892e21f16b6ab0f78 415 Gene3D G3DSA:3.40.50.1820 18 414 1.9E-110 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_06520 a5ec8c828b8c481892e21f16b6ab0f78 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 6.0E-229 T 12-10-2018 IPR010520 UPF0255 family K04M3_15880 45d90aa9bdc7b64feee05601b4ac72f2 208 Gene3D G3DSA:1.10.3480.10 1 195 4.7E-41 T 12-10-2018 K04M3_15880 45d90aa9bdc7b64feee05601b4ac72f2 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 1.0E-30 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone K04M3_15880 45d90aa9bdc7b64feee05601b4ac72f2 208 SUPERFAMILY SSF89155 4 188 1.05E-52 T 12-10-2018 IPR036411 TorD-like superfamily K04M3_14060 b238f521d3030120b2db55774dd39ffb 288 Gene3D G3DSA:3.60.110.10 1 286 5.4E-108 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_14060 b238f521d3030120b2db55774dd39ffb 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 7.2E-144 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 K04M3_14060 b238f521d3030120b2db55774dd39ffb 288 SUPERFAMILY SSF56317 4 281 2.88E-84 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_14060 b238f521d3030120b2db55774dd39ffb 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 2.3E-59 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 K04M3_13700 b238f521d3030120b2db55774dd39ffb 288 Gene3D G3DSA:3.60.110.10 1 286 5.4E-108 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_13700 b238f521d3030120b2db55774dd39ffb 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 7.2E-144 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 K04M3_13700 b238f521d3030120b2db55774dd39ffb 288 SUPERFAMILY SSF56317 4 281 2.88E-84 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_13700 b238f521d3030120b2db55774dd39ffb 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 2.3E-59 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Gene3D G3DSA:3.30.830.10 470 852 3.5E-109 T 12-10-2018 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Gene3D G3DSA:3.30.830.10 1 228 1.6E-86 T 12-10-2018 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 7.5E-26 T 12-10-2018 IPR007863 Peptidase M16, C-terminal K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 2.9E-8 T 12-10-2018 IPR007863 Peptidase M16, C-terminal K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Gene3D G3DSA:3.30.830.10 618 877 3.5E-109 T 12-10-2018 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 SUPERFAMILY SSF63411 232 468 4.15E-81 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 SUPERFAMILY SSF63411 470 693 7.67E-61 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 SUPERFAMILY SSF63411 4 226 3.84E-58 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 SUPERFAMILY SSF63411 703 909 7.51E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 2.4E-82 T 12-10-2018 IPR032632 Peptidase M16, middle/third domain K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.6E-39 T 12-10-2018 IPR011765 Peptidase M16, N-terminal K04M3_22430 bb3d1f72352d7ad4950c3b12b8242298 925 Gene3D G3DSA:3.30.830.10 239 468 8.2E-73 T 12-10-2018 K04M3_30380 6863284abc04c99aaace43f37c131ddb 447 PIRSF PIRSF006060 1 445 6.7E-49 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_30380 6863284abc04c99aaace43f37c131ddb 447 Gene3D G3DSA:1.20.1740.10 1 441 1.0E-57 T 12-10-2018 K04M3_30380 6863284abc04c99aaace43f37c131ddb 447 Pfam PF13520 Amino acid permease 8 421 1.6E-37 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_22570 6d05e574d042da6db7f99dad2be8650a 161 SUPERFAMILY SSF82093 30 142 4.05E-38 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 K04M3_22570 6d05e574d042da6db7f99dad2be8650a 161 Gene3D G3DSA:2.40.50.140 30 142 2.6E-39 T 12-10-2018 K04M3_22570 6d05e574d042da6db7f99dad2be8650a 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.157 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 K04M3_22570 6d05e574d042da6db7f99dad2be8650a 161 Pfam PF03100 CcmE 4 136 2.6E-44 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 SUPERFAMILY SSF54782 221 310 8.89E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 SUPERFAMILY SSF53850 6 220 3.04E-85 T 12-10-2018 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 Gene3D G3DSA:3.40.190.10 7 211 2.5E-84 T 12-10-2018 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 Gene3D G3DSA:3.30.160.40 222 307 2.8E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 PIRSF PIRSF001438 1 312 1.9E-121 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 Gene3D G3DSA:3.40.190.10 104 203 2.5E-84 T 12-10-2018 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 5.1E-114 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.4E-19 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.03 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 5.2E-79 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31310 f5539b32c7f20b499dce7550c181855f 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_00830 b6d3b43245a6e063d42bb8926a469f88 301 SUPERFAMILY SSF103481 65 144 7.98E-11 T 12-10-2018 K04M3_00830 b6d3b43245a6e063d42bb8926a469f88 301 Pfam PF00892 EamA-like transporter family 9 141 9.2E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_00830 b6d3b43245a6e063d42bb8926a469f88 301 Pfam PF00892 EamA-like transporter family 155 286 4.2E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_00830 b6d3b43245a6e063d42bb8926a469f88 301 SUPERFAMILY SSF103481 189 291 1.7E-9 T 12-10-2018 K04M3_47020 8c4923a38ef27af20ec8b1e69e5d61ac 116 Pfam PF00581 Rhodanese-like domain 29 113 1.4E-15 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_47020 8c4923a38ef27af20ec8b1e69e5d61ac 116 SUPERFAMILY SSF52821 27 111 4.58E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_47020 8c4923a38ef27af20ec8b1e69e5d61ac 116 Gene3D G3DSA:3.40.250.10 22 116 1.8E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_47020 8c4923a38ef27af20ec8b1e69e5d61ac 116 SMART SM00450 25 116 2.9E-21 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_04130 c82cd0eb1478dab2bc730cd62fbeca6c 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_04130 c82cd0eb1478dab2bc730cd62fbeca6c 211 Gene3D G3DSA:1.20.1050.10 89 193 6.7E-79 T 12-10-2018 K04M3_04130 c82cd0eb1478dab2bc730cd62fbeca6c 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_04130 c82cd0eb1478dab2bc730cd62fbeca6c 211 Gene3D G3DSA:3.40.30.10 11 202 6.7E-79 T 12-10-2018 K04M3_04130 c82cd0eb1478dab2bc730cd62fbeca6c 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 9.1E-9 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal K04M3_04130 c82cd0eb1478dab2bc730cd62fbeca6c 211 SUPERFAMILY SSF47616 82 208 1.25E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 Gene3D G3DSA:3.40.50.150 1 157 1.5E-49 T 12-10-2018 K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 SUPERFAMILY SSF53335 113 324 1.12E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 1.6E-56 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.532 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 Pfam PF05175 Methyltransferase small domain 172 336 2.7E-61 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 K04M3_25850 b92c6066b8b05292dda11637e55376a5 341 Gene3D G3DSA:3.40.50.150 158 341 7.7E-42 T 12-10-2018 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 Gene3D G3DSA:1.10.287.380 878 950 4.2E-19 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 SUPERFAMILY SSF52374 1 641 7.58E-136 T 12-10-2018 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 SUPERFAMILY SSF47323 642 899 8.41E-65 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 1.3E-39 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 SUPERFAMILY SSF50677 191 365 2.88E-58 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.03 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_27780 8a135e05437d7e152a9bd62df4f5e3b8 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 6.6E-226 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 1.7E-6 T 12-10-2018 IPR000160 GGDEF domain K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 Pfam PF00563 EAL domain 598 824 4.2E-56 T 12-10-2018 IPR001633 EAL domain K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 SUPERFAMILY SSF55073 419 524 4.63E-8 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 Gene3D G3DSA:3.30.70.270 399 567 1.2E-14 T 12-10-2018 K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 SMART SM00897 27 214 1.1E-25 T 12-10-2018 IPR013702 FIST domain, N-terminal K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 SMART SM01204 215 341 3.2E-18 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 Gene3D G3DSA:3.20.20.450 594 827 8.3E-58 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 Pfam PF08495 FIST N domain 31 212 7.8E-19 T 12-10-2018 IPR013702 FIST domain, N-terminal K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 Pfam PF10442 FIST C domain 215 338 3.7E-12 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 SUPERFAMILY SSF141868 598 825 4.45E-56 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_31230 c3642681efd8848ddb6a0e215248ed41 828 SMART SM00052 590 828 2.6E-31 T 12-10-2018 IPR001633 EAL domain K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 Pfam PF00226 DnaJ domain 218 278 2.9E-12 T 12-10-2018 IPR001623 DnaJ domain K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF46565 215 278 4.34E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.444 T 12-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 238 253 3.3E-9 T 12-10-2018 IPR001623 DnaJ domain K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 262 282 3.3E-9 T 12-10-2018 IPR001623 DnaJ domain K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 220 238 3.3E-9 T 12-10-2018 IPR001623 DnaJ domain K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 Gene3D G3DSA:1.10.3680.10 45 191 1.2E-26 T 12-10-2018 IPR029024 TerB-like K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF158682 5 231 9.68E-32 T 12-10-2018 IPR029024 TerB-like K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 Gene3D G3DSA:1.10.287.110 195 282 1.6E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 SMART SM00271 217 282 4.1E-18 T 12-10-2018 IPR001623 DnaJ domain K04M3_03440 7158549b84d46569e9071bcead5eaff1 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 8.7E-18 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.3E-146 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 SUPERFAMILY SSF53732 17 598 2.88E-189 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 SUPERFAMILY SSF52016 602 860 2.94E-67 T 12-10-2018 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 Gene3D G3DSA:3.30.499.20 10 361 5.6E-132 T 12-10-2018 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 Gene3D G3DSA:3.30.499.10 362 565 5.5E-78 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 Gene3D G3DSA:3.20.19.10 623 861 8.1E-83 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 Pfam PF00694 Aconitase C-terminal domain 660 791 2.3E-30 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 Gene3D G3DSA:1.10.1440.20 566 622 6.0E-10 T 12-10-2018 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 209 224 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 271 284 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 468 481 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 142 155 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 166 174 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 195 208 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 285 298 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 406 417 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 PRINTS PR00415 Aconitase family signature 364 378 1.6E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_17050 e465add1f14e23f11c0a38f69828a666 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 33 859 1.1E-290 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 K04M3_23910 fa22181b1bf431e5a5f456108153f366 188 SUPERFAMILY SSF111384 45 188 2.35E-31 T 12-10-2018 K04M3_23910 fa22181b1bf431e5a5f456108153f366 188 Gene3D G3DSA:3.30.910.20 44 188 2.0E-34 T 12-10-2018 IPR024930 Skp domain superfamily K04M3_23910 fa22181b1bf431e5a5f456108153f366 188 Pfam PF03938 Outer membrane protein (OmpH-like) 32 187 1.1E-26 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 K04M3_23910 fa22181b1bf431e5a5f456108153f366 188 SMART SM00935 34 188 9.3E-43 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 K04M3_23910 fa22181b1bf431e5a5f456108153f366 188 PIRSF PIRSF002094 20 188 3.5E-40 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 K04M3_45000 cff34560e2b4f82197f44b8bbead6bc9 154 SUPERFAMILY SSF53927 8 142 3.81E-31 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_45000 cff34560e2b4f82197f44b8bbead6bc9 154 Gene3D G3DSA:3.40.140.10 2 152 4.1E-40 T 12-10-2018 K04M3_45000 cff34560e2b4f82197f44b8bbead6bc9 154 PIRSF PIRSF006019 1 147 1.8E-43 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 K04M3_45000 cff34560e2b4f82197f44b8bbead6bc9 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 K04M3_45000 cff34560e2b4f82197f44b8bbead6bc9 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 7.0E-25 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 SUPERFAMILY SSF46689 49 99 1.52E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 SUPERFAMILY SSF55136 127 275 4.71E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 65 80 3.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 96 3.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 Gene3D G3DSA:3.20.80.10 127 276 3.1E-27 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 Pfam PF12833 Helix-turn-helix domain 18 97 7.5E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 SMART SM00342 12 96 3.4E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 SUPERFAMILY SSF46689 2 46 9.86E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 Pfam PF06445 GyrI-like small molecule binding domain 127 275 2.5E-27 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 SMART SM00871 126 276 1.4E-17 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 49 92 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 Gene3D G3DSA:1.10.10.60 46 101 2.3E-17 T 12-10-2018 K04M3_46030 55e5c0cccdea064185c3f8f22b5054a6 278 Gene3D G3DSA:1.10.10.60 1 45 1.1E-13 T 12-10-2018 K04M3_17950 758ca2a6596db042f40835d4efd94ada 117 Gene3D G3DSA:3.30.70.100 1 117 4.7E-45 T 12-10-2018 K04M3_17950 758ca2a6596db042f40835d4efd94ada 117 SUPERFAMILY SSF54909 1 116 1.93E-50 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_17950 758ca2a6596db042f40835d4efd94ada 117 PIRSF PIRSF007028 1 117 1.0E-46 T 12-10-2018 IPR009874 Protein of unknown function DUF1428 K04M3_17950 758ca2a6596db042f40835d4efd94ada 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 1.1E-43 T 12-10-2018 IPR009874 Protein of unknown function DUF1428 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 9.6E-41 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 PIRSF PIRSF002599 1 72 1.0E-22 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 SUPERFAMILY SSF50249 1 67 6.0E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 SMART SM00357 3 67 4.3E-25 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_10030 4a1fab5c7d11511cfcd9541fd6426540 72 Gene3D G3DSA:2.40.50.140 1 65 8.4E-26 T 12-10-2018 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Gene3D G3DSA:3.30.450.20 39 172 4.7E-40 T 12-10-2018 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Pfam PF17203 Single cache domain 3 47 173 1.1E-17 T 12-10-2018 IPR033463 Single cache domain 3 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 1.9E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 1.9E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 1.9E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 SUPERFAMILY SSF103190 46 172 1.92E-31 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 544 2.5E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Gene3D G3DSA:3.30.450.20 208 326 9.8E-15 T 12-10-2018 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Gene3D G3DSA:3.30.565.10 397 548 5.5E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 SUPERFAMILY SSF55785 215 324 1.29E-8 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 SMART SM00091 221 289 3.0E-4 T 12-10-2018 IPR000014 PAS domain K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 SMART SM00387 433 545 2.0E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 SUPERFAMILY SSF55890 338 393 1.11E-8 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Pfam PF00989 PAS fold 227 278 2.3E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 SUPERFAMILY SSF55874 410 542 6.16E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_02420 a86ee1f23f29b301dd580854f9cc3457 551 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 335 382 4.0E-7 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain K04M3_21350 b738c4ce0c177fdbc0c09a2e3aa34a0e 264 SMART SM00382 31 226 8.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_21350 b738c4ce0c177fdbc0c09a2e3aa34a0e 264 SUPERFAMILY SSF52540 2 231 4.42E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21350 b738c4ce0c177fdbc0c09a2e3aa34a0e 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_21350 b738c4ce0c177fdbc0c09a2e3aa34a0e 264 Pfam PF00005 ABC transporter 22 177 5.3E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_21350 b738c4ce0c177fdbc0c09a2e3aa34a0e 264 Gene3D G3DSA:3.40.50.300 1 254 5.3E-53 T 12-10-2018 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 Pfam PF00920 Dehydratase family 34 604 3.2E-223 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 Gene3D G3DSA:3.50.30.80 421 573 3.1E-56 T 12-10-2018 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.461 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 SUPERFAMILY SSF52016 421 608 6.36E-62 T 12-10-2018 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 3.3E-269 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_32140 4dc5401b5151bdfc9a54434463072f12 613 SUPERFAMILY SSF143975 3 420 5.62E-138 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 344 500 3.2E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 244 5.0E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 SUPERFAMILY SSF161098 271 509 4.58E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 506 7.9E-161 T 12-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 Gene3D G3DSA:1.10.3720.10 1 249 4.7E-42 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 Gene3D G3DSA:1.10.3720.10 271 515 1.2E-29 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_03210 efbf9dddeb1cb20899e3f073d72bc3b0 516 SUPERFAMILY SSF161098 24 245 4.71E-41 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 Hamap MF_00970 Ribonuclease E [rne]. 1 1011 35.965 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 Pfam PF10150 Ribonuclease E/G family 121 390 2.2E-94 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 SUPERFAMILY SSF50249 40 124 3.73E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 Gene3D G3DSA:3.40.1260.20 400 508 1.7E-38 T 12-10-2018 K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 Gene3D G3DSA:2.40.50.140 32 125 3.9E-32 T 12-10-2018 K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 SMART SM00316 37 119 1.1E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_21170 43fff804797310eaf6c6537f74564d73 1024 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 7.5E-171 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 Gene3D G3DSA:2.40.128.20 12 173 1.4E-51 T 12-10-2018 IPR012674 Calycin K04M3_39210 0cf08222ee8e1330f591d92203445998 177 SUPERFAMILY SSF50814 7 172 4.99E-49 T 12-10-2018 IPR012674 Calycin K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PIRSF PIRSF036893 1 177 5.3E-46 T 12-10-2018 IPR022271 Lipocalin, ApoD type K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PRINTS PR01171 Bacterial lipocalin signature 48 64 1.0E-33 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PRINTS PR01171 Bacterial lipocalin signature 101 115 1.0E-33 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PRINTS PR01171 Bacterial lipocalin signature 133 144 1.0E-33 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PRINTS PR01171 Bacterial lipocalin signature 160 170 1.0E-33 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PRINTS PR01171 Bacterial lipocalin signature 31 45 1.0E-33 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 PRINTS PR01171 Bacterial lipocalin signature 67 76 1.0E-33 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 K04M3_39210 0cf08222ee8e1330f591d92203445998 177 Pfam PF08212 Lipocalin-like domain 31 171 1.2E-38 T 12-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 SUPERFAMILY SSF51569 1 291 1.07E-100 T 12-10-2018 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 SUPERFAMILY SSF110921 391 498 2.88E-21 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 Gene3D G3DSA:1.10.238.260 280 393 5.3E-32 T 12-10-2018 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.1E-238 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 SMART SM00917 369 499 5.9E-28 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 Gene3D G3DSA:3.20.20.70 1 277 7.4E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.456 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 Gene3D G3DSA:3.30.160.270 394 500 4.1E-7 T 12-10-2018 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 Pfam PF00682 HMGL-like 4 273 2.6E-101 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 K04M3_03490 3bd1cc82c841bc64088e3eaa11c0731f 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 5.8E-30 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 K04M3_37250 848a38985c975cdb869939336f89bd62 543 Gene3D G3DSA:1.20.210.10 25 543 1.3E-218 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 5.2E-151 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 541 4.7E-213 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 2.6E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37250 848a38985c975cdb869939336f89bd62 543 SUPERFAMILY SSF81442 34 542 1.57E-193 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 33 707 1.6E-266 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 Gene3D G3DSA:3.40.30.60 376 519 6.5E-54 T 12-10-2018 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 Pfam PF00771 FHIPEP family 43 700 4.7E-270 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PIRSF PIRSF005419 21 710 3.0E-253 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 202 219 4.1E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 86 105 4.1E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 172 190 4.1E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 49 62 4.1E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 169 4.1E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 253 267 4.1E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 158 181 - T 12-10-2018 IPR025505 FHIPEP conserved site K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 Gene3D G3DSA:1.10.490.80 611 708 4.9E-15 T 12-10-2018 K04M3_22730 7bdd84b1b85d12cfaec7ceccfa773f27 710 Gene3D G3DSA:1.10.8.540 520 607 1.0E-22 T 12-10-2018 K04M3_04920 b4014c00da50fa0da35fe71dce504492 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 2.6E-90 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 K04M3_04920 b4014c00da50fa0da35fe71dce504492 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 6.5E-83 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 K04M3_04920 b4014c00da50fa0da35fe71dce504492 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.097 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 K04M3_04920 b4014c00da50fa0da35fe71dce504492 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Gene3D G3DSA:2.10.230.10 142 212 1.4E-25 T 12-10-2018 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 SUPERFAMILY SSF49493 117 259 2.09E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 SUPERFAMILY SSF46565 1 114 1.96E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Gene3D G3DSA:1.10.287.110 1 117 6.4E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Pfam PF00684 DnaJ central domain 150 210 3.3E-15 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 43.063 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 SMART SM00271 4 62 1.5E-31 T 12-10-2018 IPR001623 DnaJ domain K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 8.5E-141 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Pfam PF00226 DnaJ domain 5 67 4.2E-27 T 12-10-2018 IPR001623 DnaJ domain K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 PRINTS PR00625 DnaJ domain signature 62 81 1.4E-32 T 12-10-2018 IPR001623 DnaJ domain K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 PRINTS PR00625 DnaJ domain signature 25 40 1.4E-32 T 12-10-2018 IPR001623 DnaJ domain K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 PRINTS PR00625 DnaJ domain signature 42 62 1.4E-32 T 12-10-2018 IPR001623 DnaJ domain K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 PRINTS PR00625 DnaJ domain signature 7 25 1.4E-32 T 12-10-2018 IPR001623 DnaJ domain K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 SUPERFAMILY SSF49493 262 347 7.46E-23 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Gene3D G3DSA:2.60.260.20 258 366 5.6E-29 T 12-10-2018 K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 SUPERFAMILY SSF57938 137 213 1.96E-23 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily K04M3_06340 cb54373a7d702cc2045daac8e68c404f 382 Pfam PF01556 DnaJ C terminal domain 124 336 8.5E-46 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 Gene3D G3DSA:3.40.50.11040 3 167 3.9E-18 T 12-10-2018 K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 671 41.584 T 12-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 Gene3D G3DSA:3.40.50.12320 174 333 4.3E-45 T 12-10-2018 K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 Gene3D G3DSA:3.40.630.30 336 540 2.3E-69 T 12-10-2018 K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 SUPERFAMILY SSF52540 144 286 1.66E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 Pfam PF13718 GNAT acetyltransferase 2 378 493 4.5E-20 T 12-10-2018 IPR000182 GNAT domain K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 Pfam PF05127 Helicase 176 343 6.0E-57 T 12-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 K04M3_32450 36ff933de6d3c0faad6857febc5d987b 675 SUPERFAMILY SSF55729 356 540 2.62E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_12440 10c13978ce8ff87fc3c369735a460c65 792 Gene3D G3DSA:1.20.1640.10 189 399 1.4E-11 T 12-10-2018 K04M3_12440 10c13978ce8ff87fc3c369735a460c65 792 SUPERFAMILY SSF82866 616 767 3.27E-34 T 12-10-2018 K04M3_12440 10c13978ce8ff87fc3c369735a460c65 792 Gene3D G3DSA:1.20.1640.10 590 778 5.4E-17 T 12-10-2018 K04M3_12440 10c13978ce8ff87fc3c369735a460c65 792 SUPERFAMILY SSF82866 158 382 1.83E-30 T 12-10-2018 K04M3_12440 10c13978ce8ff87fc3c369735a460c65 792 Pfam PF03176 MMPL family 556 766 1.4E-16 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 K04M3_12440 10c13978ce8ff87fc3c369735a460c65 792 Pfam PF03176 MMPL family 103 382 5.4E-21 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 K04M3_33550 cdfc3ea9eb85f916d6f1f32ece8de8e2 423 Gene3D G3DSA:2.40.170.10 23 423 6.2E-136 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 K04M3_33550 cdfc3ea9eb85f916d6f1f32ece8de8e2 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 418 0.0 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 K04M3_33550 cdfc3ea9eb85f916d6f1f32ece8de8e2 423 Hamap MF_01301 Maltoporin [lamB]. 1 423 46.993 T 12-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 K04M3_33550 cdfc3ea9eb85f916d6f1f32ece8de8e2 423 SUPERFAMILY SSF56935 23 423 1.6E-131 T 12-10-2018 K04M3_33550 cdfc3ea9eb85f916d6f1f32ece8de8e2 423 Pfam PF02264 LamB porin 25 423 4.7E-125 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 K04M3_33340 85daead64fc3ed4e440c12ebc4ca432a 394 Gene3D G3DSA:1.20.1720.10 9 382 4.5E-80 T 12-10-2018 K04M3_33340 85daead64fc3ed4e440c12ebc4ca432a 394 SUPERFAMILY SSF103473 3 380 1.96E-54 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_33340 85daead64fc3ed4e440c12ebc4ca432a 394 Pfam PF07690 Major Facilitator Superfamily 15 348 6.2E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_33340 85daead64fc3ed4e440c12ebc4ca432a 394 PRINTS PR01035 Tetracycline resistance protein signature 135 157 1.2E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_33340 85daead64fc3ed4e440c12ebc4ca432a 394 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.2E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_33340 85daead64fc3ed4e440c12ebc4ca432a 394 PRINTS PR01035 Tetracycline resistance protein signature 303 323 1.2E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Gene3D G3DSA:1.20.120.1080 382 477 3.6E-8 T 12-10-2018 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 SMART SM00847 398 488 2.1E-7 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Pfam PF04408 Helicase associated domain (HA2) 399 458 2.4E-9 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 SMART SM00487 5 206 6.9E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 15 829 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Gene3D G3DSA:3.40.50.300 191 355 1.2E-50 T 12-10-2018 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Gene3D G3DSA:3.40.50.300 12 190 6.0E-52 T 12-10-2018 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 SUPERFAMILY SSF52540 23 441 5.65E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Pfam PF08482 ATP-dependent helicase C-terminal 685 817 2.4E-52 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Pfam PF00271 Helicase conserved C-terminal domain 216 337 1.5E-14 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 Pfam PF00270 DEAD/DEAH box helicase 23 174 4.2E-9 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 SMART SM00490 237 338 1.9E-18 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_26060 f3e40f302c0deb0f0965d531c670dbb4 833 PIRSF PIRSF005496 11 831 0.0 T 12-10-2018 K04M3_04880 2801c151cf936196e15c9c35a1e2dbe9 226 Gene3D G3DSA:3.40.600.10 1 222 1.8E-54 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 K04M3_04880 2801c151cf936196e15c9c35a1e2dbe9 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.3E-33 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 K04M3_04880 2801c151cf936196e15c9c35a1e2dbe9 226 SUPERFAMILY SSF52980 2 220 2.84E-79 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_04880 2801c151cf936196e15c9c35a1e2dbe9 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 146.407 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 K04M3_04880 2801c151cf936196e15c9c35a1e2dbe9 226 SMART SM00927 53 151 9.9E-64 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 K04M3_04880 2801c151cf936196e15c9c35a1e2dbe9 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 7.3E-100 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 K04M3_38900 e6d998211a330aac3578b6edfa7d3dc1 191 Gene3D G3DSA:1.10.10.60 1 66 4.4E-21 T 12-10-2018 K04M3_38900 e6d998211a330aac3578b6edfa7d3dc1 191 SUPERFAMILY SSF46689 2 65 2.82E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_38900 e6d998211a330aac3578b6edfa7d3dc1 191 Gene3D G3DSA:1.10.357.10 72 189 2.9E-14 T 12-10-2018 K04M3_38900 e6d998211a330aac3578b6edfa7d3dc1 191 SUPERFAMILY SSF48498 81 189 9.27E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_38900 e6d998211a330aac3578b6edfa7d3dc1 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 Gene3D G3DSA:1.10.800.10 1 264 8.4E-96 T 12-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 SUPERFAMILY SSF56534 3 234 1.96E-97 T 12-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 11 229 4.3E-46 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 14 238 3.1E-94 T 12-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.2E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.2E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.2E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 K04M3_37640 e028ac653b2bcb0706c2f0e240c55d94 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 12-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 Gene3D G3DSA:2.60.40.1180 522 606 1.2E-12 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 SUPERFAMILY SSF51445 114 527 1.58E-96 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 SUPERFAMILY SSF51011 527 607 8.16E-13 T 12-10-2018 K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 SUPERFAMILY SSF81296 1 109 5.04E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 SMART SM00642 126 518 4.5E-86 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 1.9E-77 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 Gene3D G3DSA:3.20.20.80 114 520 7.1E-137 T 12-10-2018 K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 PIRSF PIRSF036918 1 608 8.5E-264 T 12-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 Gene3D G3DSA:2.60.40.10 6 112 1.6E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_21340 0153a3f9fd56361c1d9245776d6a280d 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 103 9.3E-9 T 12-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 K04M3_28040 a68f900556782ae01341d61618b185e1 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_28040 a68f900556782ae01341d61618b185e1 148 Gene3D G3DSA:3.40.930.10 1 148 1.0E-52 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_28040 a68f900556782ae01341d61618b185e1 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 1.1E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_28040 a68f900556782ae01341d61618b185e1 148 SUPERFAMILY SSF55804 1 145 7.85E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_28040 a68f900556782ae01341d61618b185e1 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 1.3E-51 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.5E-25 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 SUPERFAMILY SSF63867 512 590 6.41E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 195 353 1.7E-38 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.8E-48 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 SMART SM00852 366 503 9.3E-40 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 PIRSF PIRSF036618 1 592 0.0 T 12-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 SUPERFAMILY SSF63882 192 362 2.22E-46 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Gene3D G3DSA:3.40.980.10 361 512 3.6E-135 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 SUPERFAMILY SSF52540 7 169 1.93E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Gene3D G3DSA:3.40.50.300 10 165 2.3E-56 T 12-10-2018 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 7.1E-43 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Gene3D G3DSA:3.90.105.10 213 360 3.6E-135 T 12-10-2018 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Gene3D G3DSA:2.20.25.120 53 85 2.3E-56 T 12-10-2018 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Gene3D G3DSA:2.40.340.10 513 583 3.6E-135 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Gene3D G3DSA:2.170.190.11 236 327 3.6E-135 T 12-10-2018 K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 2.4E-31 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 SUPERFAMILY SSF53218 363 508 2.22E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_15750 a2d7bdfca2405946c87ee9f643e526f9 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 4.6E-20 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Pfam PF02817 e3 binding domain 325 359 3.3E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 SUPERFAMILY SSF51230 1 94 6.15E-24 T 12-10-2018 IPR011053 Single hybrid motif K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 401 631 7.0E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Gene3D G3DSA:4.10.320.10 324 369 1.1E-20 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 632 1.1E-208 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Gene3D G3DSA:2.40.50.100 1 80 8.5E-22 T 12-10-2018 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Gene3D G3DSA:2.40.50.100 202 280 1.6E-20 T 12-10-2018 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Gene3D G3DSA:2.40.50.100 104 181 6.3E-21 T 12-10-2018 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 SUPERFAMILY SSF51230 203 295 1.26E-23 T 12-10-2018 IPR011053 Single hybrid motif K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Gene3D G3DSA:3.30.559.10 385 632 8.9E-97 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 SUPERFAMILY SSF51230 104 196 2.36E-23 T 12-10-2018 IPR011053 Single hybrid motif K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 SUPERFAMILY SSF47005 319 363 1.26E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Pfam PF00364 Biotin-requiring enzyme 4 73 4.5E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Pfam PF00364 Biotin-requiring enzyme 204 274 2.3E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 Pfam PF00364 Biotin-requiring enzyme 105 175 6.4E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_26220 c1eb86a283b3168242bcb82da0db1bd8 632 SUPERFAMILY SSF52777 390 631 2.8E-81 T 12-10-2018 K04M3_45860 729fc43aed6ab644a056776550497438 389 SUPERFAMILY SSF56601 8 280 4.64E-83 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_45860 729fc43aed6ab644a056776550497438 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 7.9E-23 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_45860 729fc43aed6ab644a056776550497438 389 SUPERFAMILY SSF69189 280 372 3.14E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_45860 729fc43aed6ab644a056776550497438 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 1.3E-83 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 K04M3_45860 729fc43aed6ab644a056776550497438 389 SMART SM00936 280 370 1.7E-30 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_45860 729fc43aed6ab644a056776550497438 389 Gene3D G3DSA:2.60.410.10 280 370 2.6E-28 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_45860 729fc43aed6ab644a056776550497438 389 Gene3D G3DSA:3.40.710.10 17 278 7.0E-89 T 12-10-2018 K04M3_45860 729fc43aed6ab644a056776550497438 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 5.5E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_45860 729fc43aed6ab644a056776550497438 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 5.5E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_45860 729fc43aed6ab644a056776550497438 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 5.5E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 PIRSF PIRSF006809 3 423 1.2E-151 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 SUPERFAMILY SSF52540 197 372 1.39E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.327 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.1E-31 T 12-10-2018 IPR025121 GTPase HflX, N-terminal K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 Gene3D G3DSA:3.40.50.11060 18 138 2.8E-37 T 12-10-2018 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 7.2E-157 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 Gene3D G3DSA:3.40.50.300 197 371 2.8E-43 T 12-10-2018 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 SUPERFAMILY SSF54980 364 428 1.87E-19 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.6E-28 T 12-10-2018 IPR032305 GTP-binding protein, middle domain K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_29500 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Gene3D G3DSA:1.10.8.60 301 379 1.4E-30 T 12-10-2018 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Gene3D G3DSA:1.10.10.60 400 466 3.4E-10 T 12-10-2018 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Pfam PF00158 Sigma-54 interaction domain 133 295 1.7E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 SUPERFAMILY SSF52540 134 370 1.45E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 SUPERFAMILY SSF46689 342 460 1.16E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Pfam PF00072 Response regulator receiver domain 6 115 9.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 SUPERFAMILY SSF52172 3 173 2.42E-39 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Gene3D G3DSA:3.40.50.300 120 300 3.0E-64 T 12-10-2018 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 2.7E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 SMART SM00448 4 115 3.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 SMART SM00382 149 296 1.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_22900 7a9a1a3e088bbfa4c5a7dc77ba31b6d3 469 Gene3D G3DSA:3.40.50.2300 1 119 2.4E-33 T 12-10-2018 K04M3_00990 0c9eb5ce912ba672fe0a8b488e55154a 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 7.2E-45 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 K04M3_00990 0c9eb5ce912ba672fe0a8b488e55154a 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.502 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 45 1326 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 SMART SM00382 123 414 3.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Gene3D G3DSA:3.40.50.300 59 283 1.2E-78 T 12-10-2018 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Pfam PF00271 Helicase conserved C-terminal domain 319 433 2.4E-11 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Pfam PF00270 DEAD/DEAH box helicase 118 264 4.1E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 652 728 6.8E-23 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 SMART SM00490 334 434 8.4E-15 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 SMART SM00847 494 589 3.2E-36 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Gene3D G3DSA:1.20.120.1080 478 578 3.0E-18 T 12-10-2018 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Gene3D G3DSA:3.40.50.300 284 451 1.7E-55 T 12-10-2018 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Pfam PF04408 Helicase associated domain (HA2) 496 587 4.3E-18 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 SMART SM00487 106 290 2.3E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 SUPERFAMILY SSF52540 105 631 2.94E-117 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15340 e04a0aaef3eaf224054b38cdf4cce42e 1328 Pfam PF11898 Domain of unknown function (DUF3418) 742 1326 7.6E-232 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 41 341 8.8E-96 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 362 455 2.6E-12 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 25 455 4.0E-187 T 12-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 Gene3D G3DSA:2.60.120.560 351 458 2.5E-115 T 12-10-2018 K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 SUPERFAMILY SSF75005 33 341 1.32E-99 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 Gene3D G3DSA:2.115.10.20 38 350 2.5E-115 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 41 54 - T 12-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 SMART SM00640 41 444 1.1E-140 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 K04M3_45890 be21ab2aead76f6b10073478e54840a9 484 SUPERFAMILY SSF49899 343 460 8.7E-19 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.0E-27 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 3.0E-27 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 3.0E-27 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 3.0E-27 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 3.0E-27 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 3.0E-27 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Gene3D G3DSA:3.30.70.100 72 136 1.7E-12 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Gene3D G3DSA:3.40.1110.10 474 591 8.8E-83 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 2.6E-35 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 2.2E-175 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Pfam PF00403 Heavy-metal-associated domain 77 127 1.1E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 SUPERFAMILY SSF81665 215 745 7.72E-20 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Gene3D G3DSA:3.40.50.1000 444 709 8.8E-83 T 12-10-2018 IPR023214 HAD superfamily K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 1.1E-7 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 1.1E-7 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 1.1E-7 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Gene3D G3DSA:2.70.150.20 262 367 7.0E-31 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 Pfam PF00122 E1-E2 ATPase 263 443 3.7E-48 T 12-10-2018 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 SUPERFAMILY SSF56784 462 757 9.35E-51 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 SUPERFAMILY SSF55008 75 141 1.7E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 735 7.9E-83 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 K04M3_09540 e4a20b1480554e60d5167fffc0f5dbd2 768 SUPERFAMILY SSF81653 266 362 1.15E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 3.1E-16 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 SUPERFAMILY SSF52402 14 233 2.65E-59 T 12-10-2018 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 Pfam PF01171 PP-loop family 21 199 2.5E-54 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 Gene3D G3DSA:1.20.59.20 234 319 7.9E-26 T 12-10-2018 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 Gene3D G3DSA:3.40.50.620 13 233 2.1E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 SUPERFAMILY SSF82829 235 319 3.92E-24 T 12-10-2018 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 22.126 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 3.9E-51 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 Pfam PF11734 TilS substrate C-terminal domain 365 435 2.0E-24 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 SMART SM00977 365 434 1.7E-23 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 SUPERFAMILY SSF56037 322 435 3.14E-28 T 12-10-2018 K04M3_23830 9ee5b441e66b5164d86c24637a257a5d 436 Pfam PF09179 TilS substrate binding domain 248 315 2.9E-18 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 ProSitePatterns PS00455 Putative AMP-binding domain signature. 290 301 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 Pfam PF00501 AMP-binding enzyme 110 545 1.2E-45 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 Gene3D G3DSA:3.30.300.30 545 670 2.7E-15 T 12-10-2018 K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 665 3.6E-228 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 Gene3D G3DSA:3.40.50.12780 82 541 1.7E-54 T 12-10-2018 K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 Pfam PF13193 AMP-binding enzyme C-terminal domain 559 633 1.5E-5 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_44110 f5e8076444b9d1ae21c9124d5ff3c69e 676 SUPERFAMILY SSF56801 38 663 8.9E-114 T 12-10-2018 K04M3_17760 c76904f3efe3a2ebf695eda1019889d2 302 SUPERFAMILY SSF53850 95 278 8.14E-16 T 12-10-2018 K04M3_17760 c76904f3efe3a2ebf695eda1019889d2 302 Gene3D G3DSA:3.40.190.290 94 268 5.0E-18 T 12-10-2018 K04M3_17760 c76904f3efe3a2ebf695eda1019889d2 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_17760 c76904f3efe3a2ebf695eda1019889d2 302 Gene3D G3DSA:1.10.10.10 1 85 1.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_17760 c76904f3efe3a2ebf695eda1019889d2 302 SUPERFAMILY SSF46785 4 81 8.71E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_17760 c76904f3efe3a2ebf695eda1019889d2 302 Pfam PF03466 LysR substrate binding domain 95 259 7.3E-16 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_49530 97f208635ad18022402b81143138e714 632 SMART SM00448 503 617 5.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_49530 97f208635ad18022402b81143138e714 632 SUPERFAMILY SSF47384 229 309 1.43E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_49530 97f208635ad18022402b81143138e714 632 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 4.1E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_49530 97f208635ad18022402b81143138e714 632 Gene3D G3DSA:3.30.565.10 307 475 2.6E-54 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_49530 97f208635ad18022402b81143138e714 632 Pfam PF00072 Response regulator receiver domain 505 616 2.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_49530 97f208635ad18022402b81143138e714 632 SUPERFAMILY SSF55874 297 473 4.98E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_49530 97f208635ad18022402b81143138e714 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 5.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_49530 97f208635ad18022402b81143138e714 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 5.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_49530 97f208635ad18022402b81143138e714 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 5.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_49530 97f208635ad18022402b81143138e714 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 5.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_49530 97f208635ad18022402b81143138e714 632 SMART SM00388 243 308 7.1E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_49530 97f208635ad18022402b81143138e714 632 SMART SM00387 355 471 2.8E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_49530 97f208635ad18022402b81143138e714 632 Gene3D G3DSA:1.10.287.130 209 306 1.8E-30 T 12-10-2018 K04M3_49530 97f208635ad18022402b81143138e714 632 SUPERFAMILY SSF52172 502 623 6.12E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_49530 97f208635ad18022402b81143138e714 632 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 42 145 1.9E-15 T 12-10-2018 IPR033414 Periplasmic sensor domain K04M3_49530 97f208635ad18022402b81143138e714 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 469 4.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_49530 97f208635ad18022402b81143138e714 632 Gene3D G3DSA:3.40.50.2300 488 623 7.3E-41 T 12-10-2018 K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.5E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.5E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.5E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.5E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.5E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.5E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 Gene3D G3DSA:3.40.50.720 1 241 1.3E-65 T 12-10-2018 K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 SUPERFAMILY SSF51735 3 240 9.09E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_33460 229dace57170dd47f773f6bfc8c5f866 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 2.3E-51 T 12-10-2018 K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 Gene3D G3DSA:3.40.1410.10 85 240 3.5E-32 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 SUPERFAMILY SSF64288 63 238 1.35E-37 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 Gene3D G3DSA:1.10.10.10 13 80 2.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 SMART SM00866 96 235 8.4E-23 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 75 1.7E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 SMART SM00345 16 75 5.8E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 SUPERFAMILY SSF46785 15 89 1.0E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 Pfam PF07702 UTRA domain 97 234 2.3E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_46400 162eeac0e1760bdb283f34d2866bb5ae 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 Gene3D G3DSA:2.40.10.10 30 284 1.6E-53 T 12-10-2018 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 SMART SM00020 37 278 2.6E-48 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 SUPERFAMILY SSF50494 1 282 4.76E-60 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 134 148 7.3E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 226 238 7.3E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 70 85 7.3E-13 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 227 238 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 K04M3_34650 7833c373e85d5de23b2e87d503960b48 352 Pfam PF00089 Trypsin 38 278 1.9E-41 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 306 319 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Pfam PF00158 Sigma-54 interaction domain 286 449 2.7E-61 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 SMART SM00382 302 446 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 567 587 1.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 550 567 1.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Pfam PF02954 Bacterial regulatory protein, Fis family 557 582 9.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Gene3D G3DSA:1.10.10.60 542 587 1.2E-9 T 12-10-2018 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 SUPERFAMILY SSF46689 491 586 1.69E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Gene3D G3DSA:3.40.50.300 267 454 2.2E-57 T 12-10-2018 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Pfam PF01590 GAF domain 83 186 1.6E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Gene3D G3DSA:3.30.450.40 4 188 5.0E-46 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 369 384 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 SUPERFAMILY SSF52540 285 515 2.71E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_17610 a76deffb04b7bcc4f2b94ef7b7d5d909 588 Gene3D G3DSA:1.10.8.60 458 531 3.4E-10 T 12-10-2018 K04M3_32470 51fc65c6d8bb49d4936c0e17b7630e03 219 SUPERFAMILY SSF51161 65 213 1.94E-37 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_32470 51fc65c6d8bb49d4936c0e17b7630e03 219 Gene3D G3DSA:2.160.10.10 1 218 8.8E-64 T 12-10-2018 K04M3_32470 51fc65c6d8bb49d4936c0e17b7630e03 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_32470 51fc65c6d8bb49d4936c0e17b7630e03 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 1.2E-9 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.3E-28 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 Gene3D G3DSA:3.40.980.10 1 171 3.0E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 101.959 T 12-10-2018 IPR008135 Competence-induced protein CinA K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 404 1.9E-75 T 12-10-2018 IPR008135 Competence-induced protein CinA K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 SUPERFAMILY SSF53218 2 204 5.89E-34 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 SMART SM00852 4 171 3.6E-30 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 PIRSF PIRSF006728 1 391 4.8E-112 T 12-10-2018 IPR008135 Competence-induced protein CinA K04M3_19960 7910f5d2014aa71eacfd4f544babd5a2 410 SUPERFAMILY SSF142433 252 386 1.96E-8 T 12-10-2018 IPR036653 CinA-like, C-terminal K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 SMART SM00387 372 479 7.1E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 SUPERFAMILY SSF47384 258 326 1.08E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 SUPERFAMILY SSF55874 316 478 2.23E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 SUPERFAMILY SSF103190 99 183 4.32E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 Gene3D G3DSA:3.30.450.20 69 173 1.5E-6 T 12-10-2018 K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 326 5.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 Gene3D G3DSA:3.30.565.10 325 479 1.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 SMART SM00388 262 327 1.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 Gene3D G3DSA:1.10.287.130 256 324 1.1E-14 T 12-10-2018 K04M3_34270 b50080c3ab8b1857dec8f05990f48403 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 479 2.5E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 Gene3D G3DSA:1.10.287.950 187 519 1.4E-71 T 12-10-2018 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 SUPERFAMILY SSF103190 30 164 2.41E-23 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 Pfam PF00672 HAMP domain 190 236 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 SMART SM00283 257 518 1.7E-73 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 Gene3D G3DSA:3.30.450.20 25 157 2.0E-5 T 12-10-2018 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 302 483 3.6E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 SMART SM00304 188 242 1.7E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 Pfam PF17203 Single cache domain 3 56 164 7.1E-12 T 12-10-2018 IPR033463 Single cache domain 3 K04M3_36380 7520bf7e33303a2e4982c348ee9e4b8f 519 SUPERFAMILY SSF58104 210 519 1.03E-75 T 12-10-2018 K04M3_11800 ca21a0c746552306fe9d3a1d2d7682b2 483 SUPERFAMILY SSF51735 1 295 3.43E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_11800 ca21a0c746552306fe9d3a1d2d7682b2 483 Pfam PF13460 NAD(P)H-binding 8 150 1.8E-14 T 12-10-2018 IPR016040 NAD(P)-binding domain K04M3_11800 ca21a0c746552306fe9d3a1d2d7682b2 483 Gene3D G3DSA:3.40.50.720 2 264 4.3E-34 T 12-10-2018 K04M3_11800 ca21a0c746552306fe9d3a1d2d7682b2 483 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 1.1E-12 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 SMART SM01134 67 227 2.4E-46 T 12-10-2018 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 Gene3D G3DSA:1.10.10.10 1 52 1.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 SMART SM00420 4 56 5.7E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 SUPERFAMILY SSF100950 70 227 1.05E-23 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 SUPERFAMILY SSF46785 2 59 3.33E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 K04M3_46870 eeff44c93633aacb2d75fdad34bffadf 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 6.5E-41 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Pfam PF01568 Molydopterin dinucleotide binding domain 692 803 1.5E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 114 4.6E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Gene3D G3DSA:3.40.50.740 51 324 2.3E-81 T 12-10-2018 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Gene3D G3DSA:3.40.50.740 416 624 1.7E-54 T 12-10-2018 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 SMART SM00926 54 114 2.1E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Pfam PF00384 Molybdopterin oxidoreductase 117 574 2.6E-100 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Gene3D G3DSA:2.40.40.20 667 814 2.7E-42 T 12-10-2018 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 Gene3D G3DSA:3.40.228.10 344 415 8.6E-18 T 12-10-2018 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 13 810 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 SUPERFAMILY SSF53706 55 694 2.22E-175 T 12-10-2018 K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 46 2.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 SUPERFAMILY SSF50692 638 809 2.15E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_18690 1d154c84005f183a19fa1c32d26c876a 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 728 755 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 K04M3_33060 74fd3a17a00a8f5df220362b2ce5e5db 374 Pfam PF07143 CrtC N-terminal lipocalin domain 72 247 1.1E-55 T 12-10-2018 IPR010791 AttH domain K04M3_33060 74fd3a17a00a8f5df220362b2ce5e5db 374 Gene3D G3DSA:2.40.370.10 60 250 9.9E-67 T 12-10-2018 IPR023374 AttH-like domain superfamily K04M3_33060 74fd3a17a00a8f5df220362b2ce5e5db 374 SUPERFAMILY SSF159245 49 374 1.57E-103 T 12-10-2018 K04M3_33060 74fd3a17a00a8f5df220362b2ce5e5db 374 Gene3D G3DSA:2.40.370.10 252 374 8.0E-31 T 12-10-2018 IPR023374 AttH-like domain superfamily K04M3_33060 74fd3a17a00a8f5df220362b2ce5e5db 374 Pfam PF17186 Lipocalin-like domain 252 374 6.3E-40 T 12-10-2018 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Gene3D G3DSA:3.40.50.2300 813 876 1.8E-17 T 12-10-2018 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 546 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Gene3D G3DSA:1.10.287.130 344 441 9.7E-29 T 12-10-2018 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 379 443 1.1E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 605 1.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 SUPERFAMILY SSF52172 753 873 5.41E-35 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 SMART SM00387 490 607 1.9E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Gene3D G3DSA:3.30.565.10 442 608 1.6E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 SUPERFAMILY SSF47384 363 444 5.3E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Pfam PF00072 Response regulator receiver domain 757 870 2.2E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 SUPERFAMILY SSF55874 432 603 5.37E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 Gene3D G3DSA:3.40.50.12330 746 812 3.1E-20 T 12-10-2018 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 SMART SM00388 378 443 1.5E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45370 0c82b7b7a9f082c368e2307b4cf70eb0 878 SMART SM00448 755 872 3.8E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SUPERFAMILY SSF49299 596 689 1.26E-6 T 12-10-2018 IPR035986 PKD domain superfamily K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SMART SM00636 159 575 1.6E-159 T 12-10-2018 IPR011583 Chitinase II GO:0008061 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SUPERFAMILY SSF54556 461 546 6.87E-17 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SMART SM00495 797 842 4.1E-15 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Gene3D G3DSA:3.20.20.80 162 577 6.1E-175 T 12-10-2018 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Gene3D G3DSA:2.10.10.20 796 840 1.9E-18 T 12-10-2018 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Pfam PF02010 REJ domain 613 782 3.7E-5 T 12-10-2018 IPR002859 PKD/REJ-like domain K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Gene3D G3DSA:2.60.40.10 22 132 3.1E-44 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SMART SM00089 600 690 0.0016 T 12-10-2018 IPR022409 PKD/Chitinase domain K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SMART SM00089 62 134 6.5 T 12-10-2018 IPR022409 PKD/Chitinase domain K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SMART SM00089 701 787 1.8 T 12-10-2018 IPR022409 PKD/Chitinase domain K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Gene3D G3DSA:2.60.40.10 597 692 1.1E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Pfam PF02839 Carbohydrate binding domain 814 839 3.2E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Gene3D G3DSA:3.10.50.10 466 551 6.1E-175 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Gene3D G3DSA:2.60.40.10 694 785 4.9E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SUPERFAMILY SSF81296 21 133 3.78E-32 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Pfam PF08329 Chitinase A, N-terminal domain 21 156 1.6E-54 T 12-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SUPERFAMILY SSF51445 135 588 9.28E-91 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 Pfam PF00704 Glycosyl hydrolases family 18 162 575 5.0E-87 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 K04M3_49140 44ea37a3382311d76c9500a2fb4e2a57 848 SUPERFAMILY SSF51055 783 843 6.67E-15 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_16460 ea3b5dba8503dc62c7b18bed3e3a05e0 352 Pfam PF00793 DAHP synthetase I family 44 338 1.1E-98 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 K04M3_16460 ea3b5dba8503dc62c7b18bed3e3a05e0 352 Gene3D G3DSA:3.20.20.70 1 351 1.2E-152 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_16460 ea3b5dba8503dc62c7b18bed3e3a05e0 352 PIRSF PIRSF001361 1 352 4.3E-155 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 K04M3_16460 ea3b5dba8503dc62c7b18bed3e3a05e0 352 SUPERFAMILY SSF51569 8 349 1.2E-130 T 12-10-2018 K04M3_16460 ea3b5dba8503dc62c7b18bed3e3a05e0 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.2E-159 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 K04M3_41270 96cde23b8be087004f3fbfbe9bff925f 295 Pfam PF03466 LysR substrate binding domain 122 291 6.1E-15 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_41270 96cde23b8be087004f3fbfbe9bff925f 295 SUPERFAMILY SSF53850 97 289 6.52E-20 T 12-10-2018 K04M3_41270 96cde23b8be087004f3fbfbe9bff925f 295 SUPERFAMILY SSF46785 6 86 1.22E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_41270 96cde23b8be087004f3fbfbe9bff925f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_41270 96cde23b8be087004f3fbfbe9bff925f 295 Gene3D G3DSA:1.10.10.10 5 90 7.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_41270 96cde23b8be087004f3fbfbe9bff925f 295 Gene3D G3DSA:3.40.190.290 96 281 2.2E-10 T 12-10-2018 K04M3_41620 96cde23b8be087004f3fbfbe9bff925f 295 Pfam PF03466 LysR substrate binding domain 122 291 6.1E-15 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_41620 96cde23b8be087004f3fbfbe9bff925f 295 SUPERFAMILY SSF53850 97 289 6.52E-20 T 12-10-2018 K04M3_41620 96cde23b8be087004f3fbfbe9bff925f 295 SUPERFAMILY SSF46785 6 86 1.22E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_41620 96cde23b8be087004f3fbfbe9bff925f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_41620 96cde23b8be087004f3fbfbe9bff925f 295 Gene3D G3DSA:1.10.10.10 5 90 7.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_41620 96cde23b8be087004f3fbfbe9bff925f 295 Gene3D G3DSA:3.40.190.290 96 281 2.2E-10 T 12-10-2018 K04M3_40040 d6e55dca628e0d1128b258fb759ceab8 107 Gene3D G3DSA:2.102.10.10 1 107 1.9E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_40040 d6e55dca628e0d1128b258fb759ceab8 107 SUPERFAMILY SSF50022 1 106 1.63E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_40040 d6e55dca628e0d1128b258fb759ceab8 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.2E-39 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 K04M3_40040 d6e55dca628e0d1128b258fb759ceab8 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 5.1E-34 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.3E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 2.1E-114 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 Gene3D G3DSA:3.20.70.20 78 742 9.8E-156 T 12-10-2018 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 3.2E-175 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 Pfam PF03477 ATP cone domain 6 92 1.2E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 SUPERFAMILY SSF48168 10 221 3.14E-74 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19930 6ba15ee86b64452c4e09766119780cf8 760 SUPERFAMILY SSF51998 222 739 8.24E-165 T 12-10-2018 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Pfam PF08206 Ribonuclease B OB domain 91 151 6.7E-22 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Gene3D G3DSA:2.40.50.140 77 155 1.8E-11 T 12-10-2018 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.6E-276 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SUPERFAMILY SSF50249 651 742 3.43E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SMART SM00316 650 733 1.0E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.5E-11 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SUPERFAMILY SSF50249 227 650 1.09E-144 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SUPERFAMILY SSF50249 71 154 1.8E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Gene3D G3DSA:2.40.50.140 653 763 3.5E-27 T 12-10-2018 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SMART SM00357 90 152 6.0E-14 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Pfam PF00575 S1 RNA binding domain 650 731 2.9E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 4.8E-257 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Pfam PF00773 RNB domain 267 594 1.5E-109 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.523 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SUPERFAMILY SSF50249 145 244 1.63E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29420 599a452187e281075f9d0c48cd74d5aa 835 SMART SM00955 267 595 2.1E-186 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 K04M3_33380 412bee150b24ea71082dd76af6f56522 331 Gene3D G3DSA:3.10.450.50 3 145 1.5E-18 T 12-10-2018 K04M3_33380 412bee150b24ea71082dd76af6f56522 331 SUPERFAMILY SSF54427 174 321 1.24E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_33380 412bee150b24ea71082dd76af6f56522 331 Gene3D G3DSA:3.10.450.50 175 323 4.3E-30 T 12-10-2018 K04M3_33380 412bee150b24ea71082dd76af6f56522 331 Pfam PF07366 SnoaL-like polyketide cyclase 198 313 8.1E-14 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 K04M3_33380 412bee150b24ea71082dd76af6f56522 331 Pfam PF07366 SnoaL-like polyketide cyclase 7 137 7.5E-9 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 K04M3_33380 412bee150b24ea71082dd76af6f56522 331 SUPERFAMILY SSF54427 5 147 1.03E-19 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 Gene3D G3DSA:1.25.40.10 14 161 1.7E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 3.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 3.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 3.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 3.0E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 2.4E-44 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 PIRSF PIRSF003165 1 161 3.9E-59 T 12-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 Pfam PF07720 Tetratricopeptide repeat 39 70 2.9E-7 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 K04M3_17180 4a1a0084411129df47ff2a83e461c321 161 SUPERFAMILY SSF48452 27 145 2.39E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Pfam PF07196 Flagellin hook IN motif 194 243 1.5E-9 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:2.170.280.10 276 286 1.3E-40 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:2.170.280.10 178 196 2.5E-77 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 2.0E-24 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.2E-44 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:2.30.220.10 197 230 2.5E-77 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 PRINTS PR00207 Flagellin signature 111 134 4.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 PRINTS PR00207 Flagellin signature 76 95 4.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 PRINTS PR00207 Flagellin signature 37 54 4.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:1.20.1330.10 45 177 2.5E-77 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:1.20.1330.10 287 338 1.3E-40 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 SUPERFAMILY SSF64518 5 378 1.24E-95 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:1.20.58.1830 344 378 1.3E-40 T 12-10-2018 K04M3_22990 edba7c0810832492d03ab0ff90ad7998 379 Gene3D G3DSA:1.20.58.1830 5 33 2.5E-77 T 12-10-2018 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 SMART SM00382 167 310 5.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Gene3D G3DSA:1.10.10.60 413 457 9.1E-10 T 12-10-2018 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Pfam PF00158 Sigma-54 interaction domain 148 313 3.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Pfam PF00072 Response regulator receiver domain 14 122 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Gene3D G3DSA:1.10.8.60 319 397 2.5E-23 T 12-10-2018 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 SUPERFAMILY SSF46689 360 458 2.04E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Gene3D G3DSA:3.40.50.300 138 318 2.3E-65 T 12-10-2018 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 SMART SM00448 11 122 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Gene3D G3DSA:3.40.50.2300 4 137 1.5E-32 T 12-10-2018 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 Pfam PF02954 Bacterial regulatory protein, Fis family 419 459 4.8E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 SUPERFAMILY SSF52172 11 191 1.18E-41 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_21550 6bfd68e601c9e4fb157612c6d50fbf49 468 SUPERFAMILY SSF52540 147 390 7.85E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36280 6d7601edd7c9631b384ddff2a5df70cd 570 SUPERFAMILY SSF161098 99 292 2.29E-8 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_36280 6d7601edd7c9631b384ddff2a5df70cd 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 402 568 2.5E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_36280 6d7601edd7c9631b384ddff2a5df70cd 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 304 2.3E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_36280 6d7601edd7c9631b384ddff2a5df70cd 570 Gene3D G3DSA:1.10.3720.10 90 304 6.9E-11 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_36280 6d7601edd7c9631b384ddff2a5df70cd 570 Gene3D G3DSA:1.10.3720.10 380 569 2.0E-11 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_36280 6d7601edd7c9631b384ddff2a5df70cd 570 SUPERFAMILY SSF161098 383 546 1.96E-15 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_31020 20ddf5c69983250983c979dc1c424b49 224 SMART SM00382 27 215 4.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_31020 20ddf5c69983250983c979dc1c424b49 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_31020 20ddf5c69983250983c979dc1c424b49 224 SUPERFAMILY SSF52540 1 220 3.59E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31020 20ddf5c69983250983c979dc1c424b49 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.6E-90 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 K04M3_31020 20ddf5c69983250983c979dc1c424b49 224 Gene3D G3DSA:3.40.50.300 1 223 3.0E-61 T 12-10-2018 K04M3_31020 20ddf5c69983250983c979dc1c424b49 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:3.40.50.140 1 170 1.4E-66 T 12-10-2018 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:2.20.25.10 813 871 3.2E-28 T 12-10-2018 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Pfam PF01751 Toprim domain 5 149 5.3E-32 T 12-10-2018 IPR006171 TOPRIM domain K04M3_10120 4822069bad20ad13a1aed1951304c309 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 7.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 7.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 7.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 7.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 7.2E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 4.2E-18 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SUPERFAMILY SSF56712 3 615 8.89E-199 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SMART SM00437 279 533 1.0E-117 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SMART SM00493 3 139 4.3E-33 T 12-10-2018 IPR006171 TOPRIM domain K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SMART SM00436 140 228 2.5E-47 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SUPERFAMILY SSF57783 749 812 2.21E-19 T 12-10-2018 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:1.10.290.10 287 411 2.6E-161 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.8E-5 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Pfam PF01131 DNA topoisomerase 164 571 7.2E-128 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 12-10-2018 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.247 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 1.7E-248 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:2.70.20.10 220 479 2.6E-161 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 SUPERFAMILY SSF57783 814 870 1.31E-21 T 12-10-2018 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:1.10.460.10 172 577 2.6E-161 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:3.30.65.10 702 749 2.7E-6 T 12-10-2018 K04M3_10120 4822069bad20ad13a1aed1951304c309 876 Gene3D G3DSA:3.30.65.10 750 812 7.3E-32 T 12-10-2018 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 Gene3D G3DSA:3.40.50.1980 191 297 1.4E-20 T 12-10-2018 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00691 Adhesin B signature 72 91 3.8E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00691 Adhesin B signature 28 49 3.8E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00691 Adhesin B signature 128 147 3.8E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00691 Adhesin B signature 53 71 3.8E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00691 Adhesin B signature 235 252 3.8E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00690 Adhesin family signature 239 257 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00690 Adhesin family signature 72 89 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00690 Adhesin family signature 59 72 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 PRINTS PR00690 Adhesin family signature 186 207 1.3E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 SUPERFAMILY SSF53807 22 297 1.57E-62 T 12-10-2018 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 Gene3D G3DSA:3.40.50.1980 31 180 4.0E-32 T 12-10-2018 K04M3_48200 e4b4e5690525c179b38b5c1da2cd60a0 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 295 1.1E-45 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 K04M3_26150 80030feb2cabf26d148839ba492dbe12 256 PIRSF PIRSF006648 6 253 1.7E-26 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_26150 80030feb2cabf26d148839ba492dbe12 256 Pfam PF01061 ABC-2 type transporter 8 218 1.4E-37 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 K04M3_26150 80030feb2cabf26d148839ba492dbe12 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_26150 80030feb2cabf26d148839ba492dbe12 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_26150 80030feb2cabf26d148839ba492dbe12 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 3.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_26150 80030feb2cabf26d148839ba492dbe12 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_24770 5c3471bf71c5da5e9f0946c5c1580a2a 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 6.8E-76 T 12-10-2018 IPR012807 Anti-sigma factor ChrR, putative K04M3_24770 5c3471bf71c5da5e9f0946c5c1580a2a 219 Gene3D G3DSA:2.60.120.10 108 197 1.2E-23 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_24770 5c3471bf71c5da5e9f0946c5c1580a2a 219 Gene3D G3DSA:1.10.10.1320 1 105 5.0E-15 T 12-10-2018 K04M3_24770 5c3471bf71c5da5e9f0946c5c1580a2a 219 SUPERFAMILY SSF51182 113 203 3.47E-11 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_24770 5c3471bf71c5da5e9f0946c5c1580a2a 219 Pfam PF12973 ChrR Cupin-like domain 127 193 1.1E-12 T 12-10-2018 IPR025979 ChrR-like cupin domain K04M3_43210 95943946604875876f422c78f147cfb4 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 5.5E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_43210 95943946604875876f422c78f147cfb4 987 Gene3D G3DSA:1.20.120.160 871 987 6.8E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_43210 95943946604875876f422c78f147cfb4 987 Gene3D G3DSA:3.40.50.2300 707 842 1.0E-32 T 12-10-2018 K04M3_43210 95943946604875876f422c78f147cfb4 987 SUPERFAMILY SSF47384 457 535 6.28E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_43210 95943946604875876f422c78f147cfb4 987 SUPERFAMILY SSF47226 876 985 3.14E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_43210 95943946604875876f422c78f147cfb4 987 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.4E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_43210 95943946604875876f422c78f147cfb4 987 Gene3D G3DSA:1.10.287.130 402 532 7.9E-26 T 12-10-2018 K04M3_43210 95943946604875876f422c78f147cfb4 987 Gene3D G3DSA:3.30.565.10 533 697 2.8E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_43210 95943946604875876f422c78f147cfb4 987 PIRSF PIRSF036437 1 987 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 K04M3_43210 95943946604875876f422c78f147cfb4 987 Pfam PF01627 Hpt domain 900 981 7.8E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_43210 95943946604875876f422c78f147cfb4 987 SUPERFAMILY SSF52172 712 844 1.57E-32 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_43210 95943946604875876f422c78f147cfb4 987 SMART SM00387 581 694 1.9E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_43210 95943946604875876f422c78f147cfb4 987 SMART SM00073 888 985 5.1E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_43210 95943946604875876f422c78f147cfb4 987 Pfam PF00072 Response regulator receiver domain 714 832 7.2E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_43210 95943946604875876f422c78f147cfb4 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43210 95943946604875876f422c78f147cfb4 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43210 95943946604875876f422c78f147cfb4 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43210 95943946604875876f422c78f147cfb4 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 2.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43210 95943946604875876f422c78f147cfb4 987 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 983 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 K04M3_43210 95943946604875876f422c78f147cfb4 987 SMART SM00448 712 832 1.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_43210 95943946604875876f422c78f147cfb4 987 SMART SM00388 469 534 1.2E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_43210 95943946604875876f422c78f147cfb4 987 SUPERFAMILY SSF55874 523 696 8.64E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_43210 95943946604875876f422c78f147cfb4 987 Gene3D G3DSA:1.20.58.920 47 181 5.9E-48 T 12-10-2018 IPR038188 TorS, sensor domain superfamily K04M3_43210 95943946604875876f422c78f147cfb4 987 Gene3D G3DSA:1.20.58.920 182 322 6.4E-53 T 12-10-2018 IPR038188 TorS, sensor domain superfamily K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 864 0.0 T 12-10-2018 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:3.30.1360.40 236 332 8.0E-237 T 12-10-2018 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 3.2E-158 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:3.90.199.10 33 520 8.0E-237 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 SMART SM00434 11 498 5.7E-303 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 713 0.034 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 812 2.4E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.1E-6 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 8.7E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.3E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 8.0E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.2E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:2.120.10.90 534 865 1.4E-122 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 SUPERFAMILY SSF56719 30 520 1.44E-187 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.667 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 Gene3D G3DSA:1.10.268.10 369 492 8.0E-237 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 K04M3_19910 920c7d798ae28f3892901f5717099a2a 906 SUPERFAMILY SSF101904 532 874 2.22E-106 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal K04M3_04830 77678063820b75febf1037e663e082c1 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_04830 77678063820b75febf1037e663e082c1 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_04830 77678063820b75febf1037e663e082c1 444 SMART SM00382 166 306 0.0065 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_04830 77678063820b75febf1037e663e082c1 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_04830 77678063820b75febf1037e663e082c1 444 SUPERFAMILY SSF52172 27 190 2.19E-7 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_04830 77678063820b75febf1037e663e082c1 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 12-10-2018 K04M3_04830 77678063820b75febf1037e663e082c1 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_04830 77678063820b75febf1037e663e082c1 444 Pfam PF00158 Sigma-54 interaction domain 146 305 9.1E-37 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_04830 77678063820b75febf1037e663e082c1 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_04830 77678063820b75febf1037e663e082c1 444 SUPERFAMILY SSF52540 146 380 6.88E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_04830 77678063820b75febf1037e663e082c1 444 Gene3D G3DSA:1.10.8.60 310 386 1.9E-22 T 12-10-2018 K04M3_04830 77678063820b75febf1037e663e082c1 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_04830 77678063820b75febf1037e663e082c1 444 Gene3D G3DSA:3.40.50.300 145 309 1.8E-39 T 12-10-2018 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF81301 180 393 1.63E-59 T 12-10-2018 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 12-10-2018 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 8.9E-271 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 12-10-2018 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:3.30.70.260 627 706 1.0E-12 T 12-10-2018 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF55021 631 703 7.91E-7 T 12-10-2018 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 SMART SM00471 41 153 4.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF13291 ACT domain 627 703 2.3E-14 T 12-10-2018 IPR002912 ACT domain K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 SMART SM00954 235 345 6.9E-59 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 K04M3_01450 906270b6f696a78feac9dbd7d69004ba 706 Gene3D G3DSA:3.30.460.10 193 325 2.1E-46 T 12-10-2018 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 3.8E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 3.8E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 3.8E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 3.8E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 3.8E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 6.8E-113 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 3.0E-134 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 SUPERFAMILY SSF160544 238 345 1.31E-32 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal K04M3_17350 c42fc5a5bae302567f1f61711abfadc1 349 Gene3D G3DSA:3.40.1690.10 211 349 2.0E-54 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 SUPERFAMILY SSF46785 6 85 9.87E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 Gene3D G3DSA:1.10.10.10 1 90 2.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 Gene3D G3DSA:3.40.190.10 180 279 9.9E-27 T 12-10-2018 K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 Gene3D G3DSA:3.40.190.10 98 310 9.9E-27 T 12-10-2018 K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 Pfam PF03466 LysR substrate binding domain 99 312 2.0E-10 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 SUPERFAMILY SSF53850 98 314 6.88E-24 T 12-10-2018 K04M3_34210 76fc2a337cf7c666f507ea0af3e32761 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.2E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 3.7E-30 T 12-10-2018 IPR000160 GGDEF domain K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 SMART SM00267 244 404 1.6E-37 T 12-10-2018 IPR000160 GGDEF domain K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 SUPERFAMILY SSF55073 260 402 1.8E-35 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 SMART SM00448 3 115 3.4E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 SMART SM00448 124 238 3.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 SUPERFAMILY SSF52172 4 122 3.13E-18 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 SUPERFAMILY SSF52172 123 260 6.69E-32 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 Pfam PF00072 Response regulator receiver domain 127 235 2.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 Pfam PF00072 Response regulator receiver domain 5 104 6.5E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 402 3.1E-37 T 12-10-2018 IPR000160 GGDEF domain K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 Gene3D G3DSA:3.40.50.2300 1 119 9.1E-17 T 12-10-2018 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 Gene3D G3DSA:3.40.50.2300 120 246 2.7E-30 T 12-10-2018 K04M3_24630 be7007a0bb314769e7bb2589b861e39d 405 Gene3D G3DSA:3.30.70.270 247 403 5.2E-40 T 12-10-2018 K04M3_21060 3490fd98afd51c7532dbe07a7e0622f9 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 K04M3_21060 3490fd98afd51c7532dbe07a7e0622f9 271 SUPERFAMILY SSF56752 1 266 5.76E-66 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 K04M3_21060 3490fd98afd51c7532dbe07a7e0622f9 271 Pfam PF01063 Amino-transferase class IV 26 247 2.9E-45 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 K04M3_21060 3490fd98afd51c7532dbe07a7e0622f9 271 Gene3D G3DSA:3.30.470.10 1 106 1.5E-23 T 12-10-2018 K04M3_21060 3490fd98afd51c7532dbe07a7e0622f9 271 Gene3D G3DSA:3.20.10.10 112 271 9.4E-51 T 12-10-2018 K04M3_21060 3490fd98afd51c7532dbe07a7e0622f9 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 266 3.4E-101 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 SUPERFAMILY SSF51011 457 535 1.66E-8 T 12-10-2018 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 Gene3D G3DSA:3.20.20.80 52 182 4.7E-38 T 12-10-2018 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 Gene3D G3DSA:3.20.20.80 193 425 9.2E-31 T 12-10-2018 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 SMART SM00642 62 448 3.6E-32 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 Pfam PF00128 Alpha amylase, catalytic domain 206 391 9.9E-15 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 Pfam PF00128 Alpha amylase, catalytic domain 88 175 2.9E-26 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 Gene3D G3DSA:2.60.40.1180 451 534 1.2E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_33580 17d8f259597e45057ef7ce85998611ae 537 SUPERFAMILY SSF51445 56 458 1.88E-67 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 9.2E-75 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 Pfam PF01895 PhoU domain 128 210 1.2E-16 T 12-10-2018 IPR026022 PhoU domain K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 Pfam PF01895 PhoU domain 23 108 1.8E-22 T 12-10-2018 IPR026022 PhoU domain K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 SUPERFAMILY SSF109755 10 225 1.36E-68 T 12-10-2018 K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 Gene3D G3DSA:1.20.58.220 118 230 1.6E-34 T 12-10-2018 IPR038078 PhoU-like domain superfamily K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 Gene3D G3DSA:1.20.58.220 2 117 3.7E-40 T 12-10-2018 IPR038078 PhoU-like domain superfamily K04M3_05520 7ed3df8cfc3b582ff9eee20d7b05d4ff 232 PIRSF PIRSF003107 4 223 6.8E-70 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 Gene3D G3DSA:3.30.9.50 80 270 5.9E-124 T 12-10-2018 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 5.7E-138 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 Pfam PF01494 FAD binding domain 5 347 2.0E-29 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 SUPERFAMILY SSF51905 5 385 2.59E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 12-10-2018 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 12-10-2018 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 12-10-2018 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 12-10-2018 K04M3_26990 f657800e1b553f12bfb59fd9535ceacf 402 Gene3D G3DSA:3.50.50.60 6 339 5.9E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 5.0E-18 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.40.120.10 33 184 1.1E-46 T 12-10-2018 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 5.1E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 5.1E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 5.1E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 478 531 3.0E-8 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF55957 432 555 9.94E-16 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.40.120.10 203 321 4.0E-21 T 12-10-2018 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF53738 203 311 2.75E-21 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 309 2.2E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF53738 301 443 1.84E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 SUPERFAMILY SSF53738 28 231 3.81E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.40.120.10 322 441 2.1E-29 T 12-10-2018 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 8.8E-42 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_37230 434a383a52630d326a52df10c8dff6ea 564 Gene3D G3DSA:3.30.310.50 448 556 3.9E-8 T 12-10-2018 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 ProSitePatterns PS01176 Initiation factor 2 signature. 853 875 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.40.50.300 399 573 6.0E-70 T 12-10-2018 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 406 560 2.5E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.3E-16 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF00009 Elongation factor Tu GTP binding domain 406 562 4.7E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 900 17.644 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF50447 576 657 1.02E-22 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF52540 401 567 4.39E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 320 902 1.7E-284 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.30.56.50 2 50 2.2E-23 T 12-10-2018 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF11987 Translation-initiation factor 2 687 792 2.0E-37 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-8 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 328 377 5.8E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:2.40.30.10 574 692 3.5E-40 T 12-10-2018 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF46955 3 50 1.76E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF50447 804 900 8.44E-35 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 SUPERFAMILY SSF52156 680 809 8.76E-39 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:2.40.30.10 804 901 1.2E-34 T 12-10-2018 K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Gene3D G3DSA:3.40.50.10050 697 803 5.5E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily K04M3_25630 fd517a6643e9217c734d97c2e1b949f1 903 Pfam PF03144 Elongation factor Tu domain 2 823 889 3.2E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_19470 81e665ac4888163da18478d48cb717b2 199 Pfam PF00293 NUDIX domain 45 160 4.8E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_19470 81e665ac4888163da18478d48cb717b2 199 Gene3D G3DSA:3.90.79.10 16 195 7.5E-49 T 12-10-2018 K04M3_19470 81e665ac4888163da18478d48cb717b2 199 SUPERFAMILY SSF55811 11 192 8.94E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_01590 c2c22cc0c95118612d28ba21298899b5 279 Gene3D G3DSA:3.40.50.300 3 279 6.6E-89 T 12-10-2018 K04M3_01590 c2c22cc0c95118612d28ba21298899b5 279 SMART SM00382 40 232 3.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_01590 c2c22cc0c95118612d28ba21298899b5 279 SUPERFAMILY SSF52540 6 254 4.14E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01590 c2c22cc0c95118612d28ba21298899b5 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_01590 c2c22cc0c95118612d28ba21298899b5 279 Pfam PF00005 ABC transporter 32 181 5.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_25120 937d323086fc021a250e487af9f0db8c 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_25120 937d323086fc021a250e487af9f0db8c 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 K04M3_25120 937d323086fc021a250e487af9f0db8c 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 9.8E-180 T 12-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 K04M3_25120 937d323086fc021a250e487af9f0db8c 343 Gene3D G3DSA:3.30.60.70 131 171 1.0E-20 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 K04M3_25120 937d323086fc021a250e487af9f0db8c 343 SUPERFAMILY SSF51161 91 324 1.14E-34 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_25120 937d323086fc021a250e487af9f0db8c 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 12-10-2018 K04M3_25120 937d323086fc021a250e487af9f0db8c 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.957 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 K04M3_25120 937d323086fc021a250e487af9f0db8c 343 Gene3D G3DSA:3.30.70.2010 1 130 9.6E-39 T 12-10-2018 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 Gene3D G3DSA:3.30.930.10 1 215 3.2E-110 T 12-10-2018 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 SUPERFAMILY SSF55681 8 293 6.96E-133 T 12-10-2018 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 Gene3D G3DSA:1.20.58.180 216 298 7.0E-34 T 12-10-2018 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 1.5E-148 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.4E-169 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00110 2af9c38956da91008b313253d82c9bd7 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.592 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 Gene3D G3DSA:2.40.50.100 291 359 4.2E-13 T 12-10-2018 K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 SMART SM00382 24 206 3.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 Pfam PF00005 ABC transporter 17 157 7.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 Gene3D G3DSA:3.40.50.300 4 234 1.2E-53 T 12-10-2018 K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 1.9E-137 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 SUPERFAMILY SSF50331 235 358 5.1E-17 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 SUPERFAMILY SSF52540 13 235 1.51E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_40490 5bb3b91b35809c82334161ccb7d40d0d 368 Pfam PF03459 TOBE domain 292 358 1.6E-12 T 12-10-2018 IPR005116 Transport-associated OB, type 1 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 SMART SM00278 104 123 540.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 SMART SM00278 139 158 0.071 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Gene3D G3DSA:1.10.150.20 98 174 3.2E-25 T 12-10-2018 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 SUPERFAMILY SSF46929 188 233 1.05E-12 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Gene3D G3DSA:2.40.50.140 32 96 6.3E-28 T 12-10-2018 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Pfam PF14520 Helix-hairpin-helix domain 103 161 2.0E-13 T 12-10-2018 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 32 234 31.571 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Pfam PF01330 RuvA N terminal domain 33 93 5.7E-21 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 32 233 1.0E-64 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Gene3D G3DSA:1.10.8.10 187 234 2.7E-24 T 12-10-2018 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 SUPERFAMILY SSF47781 97 167 3.34E-19 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 Pfam PF07499 RuvA, C-terminal domain 190 233 1.1E-16 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 K04M3_10370 15c188d9bfccd097488600a7d5c8d2c4 234 SUPERFAMILY SSF50249 33 94 3.77E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 Gene3D G3DSA:3.40.50.1100 12 306 7.3E-126 T 12-10-2018 K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 SUPERFAMILY SSF53686 3 313 1.57E-96 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 Gene3D G3DSA:3.40.50.1100 43 145 7.3E-126 T 12-10-2018 K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.0E-68 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.1E-142 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 K04M3_07860 a9f2049d181ab3789a07a66b6b9322bf 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.5E-135 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 K04M3_47450 a225df748a476f8eaff500d79cb94766 459 SUPERFAMILY SSF53383 57 450 9.76E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_47450 a225df748a476f8eaff500d79cb94766 459 Pfam PF00202 Aminotransferase class-III 57 449 5.0E-86 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_47450 a225df748a476f8eaff500d79cb94766 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_47450 a225df748a476f8eaff500d79cb94766 459 Gene3D G3DSA:3.40.640.10 89 348 3.4E-119 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_47450 a225df748a476f8eaff500d79cb94766 459 Gene3D G3DSA:3.90.1150.10 61 444 3.4E-119 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_47450 a225df748a476f8eaff500d79cb94766 459 PIRSF PIRSF000521 5 158 6.6E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_47450 a225df748a476f8eaff500d79cb94766 459 PIRSF PIRSF000521 151 452 1.5E-19 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 Gene3D G3DSA:2.40.50.940 226 355 1.9E-16 T 12-10-2018 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 6.5E-163 T 12-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 Pfam PF08402 TOBE domain 279 354 1.2E-4 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 Pfam PF00005 ABC transporter 23 165 2.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 Gene3D G3DSA:3.40.50.300 7 225 1.6E-68 T 12-10-2018 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 SMART SM00382 32 215 6.2E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 SUPERFAMILY SSF52540 8 247 4.66E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 SUPERFAMILY SSF50331 240 357 1.36E-11 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_47410 fc399bdb0994e618293bef83740c85dd 368 Gene3D G3DSA:2.40.50.140 286 349 1.9E-16 T 12-10-2018 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 PIRSF PIRSF000006 1 322 1.8E-111 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.0E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.1E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 239 320 1.34E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 2.4E-60 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.10.760.10 209 295 5.2E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.20.58.1490 1 94 1.3E-34 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 55 238 1.16E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 3.3E-23 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal K04M3_16140 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.10.760.10 131 318 5.2E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_42380 8514d9138b26cee2174fc12def7be7d8 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.1E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_42380 8514d9138b26cee2174fc12def7be7d8 133 Gene3D G3DSA:3.10.180.10 6 133 3.9E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_42380 8514d9138b26cee2174fc12def7be7d8 133 SUPERFAMILY SSF54593 8 132 6.31E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Gene3D G3DSA:1.25.50.10 545 867 8.9E-116 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Gene3D G3DSA:2.60.40.1840 443 544 9.7E-37 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Gene3D G3DSA:2.60.40.1730 15 193 6.3E-70 T 12-10-2018 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Gene3D G3DSA:1.10.390.10 279 442 3.3E-64 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 SUPERFAMILY SSF55486 202 449 9.52E-75 T 12-10-2018 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 6.1E-34 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 SUPERFAMILY SSF63737 7 192 7.19E-45 T 12-10-2018 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Gene3D G3DSA:1.10.1740.60 194 278 1.9E-40 T 12-10-2018 K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 6.2E-114 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal K04M3_16340 ef1c285fb619c89757e926e7320fffca 868 Pfam PF01433 Peptidase family M1 domain 208 435 3.5E-57 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 SUPERFAMILY SSF52096 2 304 1.1E-64 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.0E-58 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 4.9E-6 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 5.4E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Gene3D G3DSA:3.40.50.720 314 497 7.0E-65 T 12-10-2018 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Gene3D G3DSA:1.10.1040.50 498 710 1.9E-73 T 12-10-2018 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Gene3D G3DSA:3.90.226.10 1 312 7.1E-90 T 12-10-2018 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.276 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 205 9.7E-39 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 SUPERFAMILY SSF51735 315 496 1.09E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 SUPERFAMILY SSF48179 496 605 5.87E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_00190 7cf97ff16debb03ac55623da7f8b1860 723 SUPERFAMILY SSF48179 624 715 4.93E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.361 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 Gene3D G3DSA:3.30.300.30 519 650 5.5E-31 T 12-10-2018 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 Pfam PF00501 AMP-binding enzyme 83 523 2.3E-91 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 Gene3D G3DSA:3.40.50.12780 50 516 3.2E-103 T 12-10-2018 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 SUPERFAMILY SSF56801 9 644 2.49E-181 T 12-10-2018 K04M3_30190 7541c93ab0ead292fc4dbb75d1f68bc8 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.8E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_01820 94e8d413db5759f452eb4843f9dfa4cb 139 Gene3D G3DSA:2.60.120.10 1 137 1.2E-51 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_01820 94e8d413db5759f452eb4843f9dfa4cb 139 SUPERFAMILY SSF51182 4 130 4.56E-42 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_01820 94e8d413db5759f452eb4843f9dfa4cb 139 Pfam PF05523 WxcM-like, C-terminal 3 131 4.2E-51 T 12-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 K04M3_06330 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:3.90.640.10 228 315 3.0E-165 T 12-10-2018 K04M3_06330 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF100920 383 539 4.05E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 2.1E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF53067 186 381 4.2E-65 T 12-10-2018 K04M3_06330 48a33f65768c75615baea13001110efc 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 5.8E-284 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 K04M3_06330 48a33f65768c75615baea13001110efc 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.053 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 K04M3_06330 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF100934 534 606 1.8E-5 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:2.60.34.10 382 522 8.6E-65 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:1.20.1270.10 523 602 5.1E-27 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 Pfam PF00012 Hsp70 protein 4 601 9.8E-261 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 SUPERFAMILY SSF53067 1 182 9.46E-65 T 12-10-2018 K04M3_06330 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:3.30.420.40 5 378 3.0E-165 T 12-10-2018 K04M3_06330 48a33f65768c75615baea13001110efc 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_06330 48a33f65768c75615baea13001110efc 637 Gene3D G3DSA:3.30.420.40 179 365 3.0E-165 T 12-10-2018 K04M3_06330 48a33f65768c75615baea13001110efc 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_22650 5a4b8da24a34e0d988c4668c125380fa 259 SUPERFAMILY SSF52540 1 252 1.19E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_22650 5a4b8da24a34e0d988c4668c125380fa 259 Gene3D G3DSA:3.40.50.300 1 254 3.0E-65 T 12-10-2018 K04M3_22650 5a4b8da24a34e0d988c4668c125380fa 259 Pfam PF13614 AAA domain 4 174 5.7E-50 T 12-10-2018 IPR025669 AAA domain K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 Gene3D G3DSA:3.40.50.2300 3 146 4.6E-25 T 12-10-2018 K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 Pfam PF12431 Transcriptional regulator 133 161 4.1E-9 T 12-10-2018 IPR028141 Transcriptional regulator K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 Pfam PF00072 Response regulator receiver domain 6 117 8.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 SMART SM00448 4 117 1.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 SUPERFAMILY SSF52172 5 142 1.02E-30 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 PIRSF PIRSF006171 2 226 2.7E-79 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 K04M3_02410 2b63995ee5fa7b449e2d959119a1c45e 226 SUPERFAMILY SSF46785 164 219 7.32E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 Pfam PF08281 Sigma-70, region 4 123 175 5.8E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 SUPERFAMILY SSF88659 119 180 2.24E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 SUPERFAMILY SSF88946 27 108 6.67E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 3.4E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 Gene3D G3DSA:1.10.1740.10 13 95 1.4E-18 T 12-10-2018 K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 Gene3D G3DSA:1.10.10.10 117 181 1.3E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_22480 ff3a4f07325dd37672434b0ad58aa28a 191 Pfam PF04542 Sigma-70 region 2 33 99 4.2E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_44350 9af2b53b29c0ad23ba09ae923ec6f93d 497 SMART SM00240 29 80 5.4E-8 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 K04M3_44350 9af2b53b29c0ad23ba09ae923ec6f93d 497 Gene3D G3DSA:2.60.200.20 4 109 4.4E-22 T 12-10-2018 K04M3_44350 9af2b53b29c0ad23ba09ae923ec6f93d 497 Pfam PF00498 FHA domain 31 97 9.9E-17 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 K04M3_44350 9af2b53b29c0ad23ba09ae923ec6f93d 497 SUPERFAMILY SSF49879 21 106 1.57E-24 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 Gene3D G3DSA:2.102.10.10 43 190 7.2E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 4.3E-11 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.0E-13 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.2E-74 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 SUPERFAMILY SSF50022 30 189 6.75E-43 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 K04M3_04100 d7e276221f6f2f8d3631636f445b643e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 K04M3_08920 bb7387e3eb0145ca56ea6cf075992090 255 SUPERFAMILY SSF69593 70 249 2.09E-23 T 12-10-2018 K04M3_08920 bb7387e3eb0145ca56ea6cf075992090 255 Pfam PF01553 Acyltransferase 76 189 3.3E-14 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_08920 bb7387e3eb0145ca56ea6cf075992090 255 SMART SM00563 86 196 1.9E-12 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_23250 949594b194be88daa41d93caa8e107af 391 Gene3D G3DSA:3.90.550.10 26 259 4.6E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_23250 949594b194be88daa41d93caa8e107af 391 SUPERFAMILY SSF53448 37 307 7.59E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_23250 949594b194be88daa41d93caa8e107af 391 Pfam PF13641 Glycosyltransferase like family 2 40 271 7.6E-21 T 12-10-2018 K04M3_18910 2c2f7b0d08c2b0b172256a471d4d1ad7 214 Gene3D G3DSA:2.60.40.10 19 156 1.4E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 Gene3D G3DSA:3.40.50.300 143 275 7.8E-8 T 12-10-2018 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 SUPERFAMILY SSF46689 349 401 7.17E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 Gene3D G3DSA:1.10.8.60 277 345 6.9E-11 T 12-10-2018 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 Gene3D G3DSA:1.10.10.60 346 403 4.8E-7 T 12-10-2018 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 Pfam PF02954 Bacterial regulatory protein, Fis family 361 398 2.3E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 SUPERFAMILY SSF52172 5 187 7.83E-39 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 SUPERFAMILY SSF52540 144 334 8.39E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 SMART SM00448 3 114 1.3E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 Pfam PF00072 Response regulator receiver domain 5 114 1.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_32630 8969eecee00067d2fe02abe5530e356f 407 Gene3D G3DSA:3.40.50.2300 4 122 5.6E-35 T 12-10-2018 K04M3_07450 d837f7933407b723473e8c73a42f2df2 193 SMART SM00463 92 175 2.5E-14 T 12-10-2018 IPR002625 Smr domain K04M3_07450 d837f7933407b723473e8c73a42f2df2 193 Pfam PF01713 Smr domain 95 175 1.3E-21 T 12-10-2018 IPR002625 Smr domain K04M3_07450 d837f7933407b723473e8c73a42f2df2 193 Gene3D G3DSA:3.30.1370.110 48 181 3.7E-43 T 12-10-2018 K04M3_07450 d837f7933407b723473e8c73a42f2df2 193 SUPERFAMILY SSF160443 93 175 4.32E-14 T 12-10-2018 IPR036063 Smr domain superfamily K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 Gene3D G3DSA:3.30.420.150 114 291 8.5E-82 T 12-10-2018 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 1.1E-87 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.987 T 12-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 PIRSF PIRSF001267 1 497 2.2E-178 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 Gene3D G3DSA:1.10.3210.10 306 497 1.7E-47 T 12-10-2018 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 Gene3D G3DSA:3.30.420.40 11 299 8.5E-82 T 12-10-2018 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 SUPERFAMILY SSF53067 9 129 2.91E-35 T 12-10-2018 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 SUPERFAMILY SSF53067 134 304 4.19E-42 T 12-10-2018 K04M3_31490 92abe088f7cbadec55c81a992f9b7f21 497 SUPERFAMILY SSF109604 309 495 1.88E-43 T 12-10-2018 K04M3_34950 b582021b49bad2ecc818d862783ed7c6 299 Pfam PF03466 LysR substrate binding domain 88 291 8.5E-42 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_34950 b582021b49bad2ecc818d862783ed7c6 299 SUPERFAMILY SSF53850 88 292 2.53E-42 T 12-10-2018 K04M3_34950 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:1.10.10.10 1 85 6.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_34950 b582021b49bad2ecc818d862783ed7c6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34950 b582021b49bad2ecc818d862783ed7c6 299 SUPERFAMILY SSF46785 1 87 1.72E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_34950 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:3.40.190.290 90 291 1.6E-60 T 12-10-2018 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 Gene3D G3DSA:3.40.30.60 369 514 1.1E-42 T 12-10-2018 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 Gene3D G3DSA:1.10.8.540 515 603 2.7E-32 T 12-10-2018 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 Pfam PF00771 FHIPEP family 26 695 4.2E-237 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 Gene3D G3DSA:1.10.490.80 605 703 6.0E-34 T 12-10-2018 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 703 1.5E-298 T 12-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 PIRSF PIRSF005419 1 705 1.3E-263 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_17220 f208e885dc5b07e8768e8954c7527c34 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 12-10-2018 IPR025505 FHIPEP conserved site K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 1.1E-85 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 SUPERFAMILY SSF82866 73 293 4.71E-41 T 12-10-2018 K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 4.5E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 Pfam PF02355 Protein export membrane protein 113 292 3.7E-70 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.945 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 Gene3D G3DSA:1.20.1640.10 105 300 2.1E-12 T 12-10-2018 K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_05650 06253b4668056cac5035ba7e2ac82028 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.114 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 Gene3D G3DSA:3.40.50.170 81 277 2.0E-67 T 12-10-2018 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 12-10-2018 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 Pfam PF00551 Formyl transferase 82 259 4.6E-49 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.9E-122 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 Gene3D G3DSA:3.30.70.260 1 77 4.0E-15 T 12-10-2018 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PIRSF PIRSF036480 1 277 3.8E-112 T 12-10-2018 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 SUPERFAMILY SSF53328 82 276 1.83E-60 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.3E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.3E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.3E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.3E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.3E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.3E-65 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 K04M3_08590 f646f8cb3bab327b6c24e28b66c5a598 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 12-10-2018 IPR002912 ACT domain K04M3_34430 972f248c583192e3401b7d76cc8d4ce1 357 Gene3D G3DSA:3.30.750.140 215 329 2.2E-22 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily K04M3_34430 972f248c583192e3401b7d76cc8d4ce1 357 Pfam PF02120 Flagellar hook-length control protein FliK 238 317 1.4E-20 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal K04M3_35660 5d01b61d13e87404399f52a03d6cc132 150 SUPERFAMILY SSF49503 23 148 2.29E-46 T 12-10-2018 IPR008972 Cupredoxin K04M3_35660 5d01b61d13e87404399f52a03d6cc132 150 TIGRFAM TIGR02695 azurin: azurin 25 149 1.4E-61 T 12-10-2018 IPR014068 Azurin K04M3_35660 5d01b61d13e87404399f52a03d6cc132 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 149 2.6E-25 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 K04M3_35660 5d01b61d13e87404399f52a03d6cc132 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 3.0E-64 T 12-10-2018 K04M3_35660 5d01b61d13e87404399f52a03d6cc132 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site K04M3_35660 5d01b61d13e87404399f52a03d6cc132 150 Gene3D G3DSA:2.60.40.420 23 149 9.1E-46 T 12-10-2018 IPR008972 Cupredoxin K04M3_32520 969e7115f005561bebffd2d3b0112055 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 K04M3_32520 969e7115f005561bebffd2d3b0112055 300 Gene3D G3DSA:3.40.50.10490 1 220 6.5E-83 T 12-10-2018 K04M3_32520 969e7115f005561bebffd2d3b0112055 300 Gene3D G3DSA:1.10.8.1080 221 299 5.8E-29 T 12-10-2018 K04M3_32520 969e7115f005561bebffd2d3b0112055 300 Pfam PF01380 SIS domain 129 212 2.3E-7 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_32520 969e7115f005561bebffd2d3b0112055 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 9.1E-136 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 K04M3_32520 969e7115f005561bebffd2d3b0112055 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.604 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 K04M3_32520 969e7115f005561bebffd2d3b0112055 300 SUPERFAMILY SSF53697 8 250 6.67E-72 T 12-10-2018 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 SUPERFAMILY SSF46785 3 71 6.34E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 Gene3D G3DSA:1.10.10.10 1 67 3.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 SUPERFAMILY SSF64288 56 232 2.2E-47 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 9.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 9.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 SMART SM00345 8 67 5.8E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 Pfam PF07702 UTRA domain 89 226 2.6E-38 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 SMART SM00866 88 227 1.9E-34 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_44140 a27ba26fe8521128e7aced54fde1df43 235 Gene3D G3DSA:3.40.1410.10 69 234 1.1E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_27620 799eaa2c0f544e2b046fc65ab405ad77 417 Gene3D G3DSA:1.10.3210.10 21 330 9.2E-56 T 12-10-2018 K04M3_27620 799eaa2c0f544e2b046fc65ab405ad77 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 8.9E-30 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 K04M3_27620 799eaa2c0f544e2b046fc65ab405ad77 417 TIGRFAM TIGR00277 HDIG: HDIG domain 166 258 1.2E-7 T 12-10-2018 IPR006675 HDIG domain K04M3_27620 799eaa2c0f544e2b046fc65ab405ad77 417 SUPERFAMILY SSF109604 160 330 5.14E-26 T 12-10-2018 K04M3_27620 799eaa2c0f544e2b046fc65ab405ad77 417 Pfam PF01966 HD domain 170 290 2.3E-15 T 12-10-2018 IPR006674 HD domain K04M3_27620 799eaa2c0f544e2b046fc65ab405ad77 417 SMART SM00471 164 300 8.2E-6 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_22050 52a7d1c450e975be5db0599d1aa86f4b 315 Gene3D G3DSA:3.40.50.11550 44 268 1.4E-28 T 12-10-2018 K04M3_22050 52a7d1c450e975be5db0599d1aa86f4b 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 56 255 8.3E-61 T 12-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN K04M3_22050 52a7d1c450e975be5db0599d1aa86f4b 315 PIRSF PIRSF020419 1 299 1.1E-80 T 12-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted K04M3_22050 52a7d1c450e975be5db0599d1aa86f4b 315 Gene3D G3DSA:1.10.8.760 155 219 1.4E-28 T 12-10-2018 K04M3_22050 52a7d1c450e975be5db0599d1aa86f4b 315 SUPERFAMILY SSF159501 33 282 8.89E-75 T 12-10-2018 K04M3_47180 1a14a16dc29a43b14ae46e54ba733bde 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_47180 1a14a16dc29a43b14ae46e54ba733bde 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 140 6.1E-8 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_47180 1a14a16dc29a43b14ae46e54ba733bde 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 2.7E-40 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 2.0E-18 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 Gene3D G3DSA:3.40.930.10 502 647 3.7E-51 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 8.1E-169 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 Gene3D G3DSA:3.40.50.2300 372 476 2.9E-36 T 12-10-2018 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 6.8E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 SUPERFAMILY SSF52794 385 472 2.75E-25 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 1.0E-33 T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_03690 c06f7c175ae87852bee91421dccf3a4f 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_35110 c410e160a520559b3f3265b573a1adda 579 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_35110 c410e160a520559b3f3265b573a1adda 579 SMART SM00382 324 510 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35110 c410e160a520559b3f3265b573a1adda 579 SMART SM00382 29 221 2.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35110 c410e160a520559b3f3265b573a1adda 579 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 4.8E-20 T 12-10-2018 IPR022216 Putative ABC cobalt transporter K04M3_35110 c410e160a520559b3f3265b573a1adda 579 Pfam PF00005 ABC transporter 315 461 2.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35110 c410e160a520559b3f3265b573a1adda 579 SUPERFAMILY SSF52540 288 527 3.26E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35110 c410e160a520559b3f3265b573a1adda 579 SUPERFAMILY SSF52540 2 235 5.19E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35110 c410e160a520559b3f3265b573a1adda 579 Gene3D G3DSA:3.40.50.300 1 253 3.6E-68 T 12-10-2018 K04M3_35110 c410e160a520559b3f3265b573a1adda 579 Pfam PF00005 ABC transporter 20 170 1.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35110 c410e160a520559b3f3265b573a1adda 579 Gene3D G3DSA:3.40.50.300 296 577 9.4E-65 T 12-10-2018 K04M3_35110 c410e160a520559b3f3265b573a1adda 579 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_19530 aec7854d18724750be9964bf319bb287 541 SUPERFAMILY SSF90123 6 255 9.81E-5 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_19530 aec7854d18724750be9964bf319bb287 541 SUPERFAMILY SSF58104 224 533 9.42E-61 T 12-10-2018 K04M3_19530 aec7854d18724750be9964bf319bb287 541 SMART SM00304 203 256 5.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_19530 aec7854d18724750be9964bf319bb287 541 Gene3D G3DSA:1.10.287.950 203 534 1.4E-63 T 12-10-2018 K04M3_19530 aec7854d18724750be9964bf319bb287 541 SMART SM00283 271 532 2.5E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_19530 aec7854d18724750be9964bf319bb287 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_19530 aec7854d18724750be9964bf319bb287 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 1.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_19530 aec7854d18724750be9964bf319bb287 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_19530 aec7854d18724750be9964bf319bb287 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 495 4.3E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Pfam PF13519 von Willebrand factor type A domain 5824 5941 7.2E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 PRINTS PR00313 NodO calcium binding signature 6166 6174 2.0E-6 T 12-10-2018 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 PRINTS PR00313 NodO calcium binding signature 6094 6105 2.0E-6 T 12-10-2018 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 PRINTS PR00313 NodO calcium binding signature 6193 6201 2.0E-6 T 12-10-2018 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 PRINTS PR00313 NodO calcium binding signature 6202 6211 2.0E-6 T 12-10-2018 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF141072 4613 4721 3.27E-14 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6171 6189 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.150.10.10 6158 6282 1.8E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 3318 3413 0.0065 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 715 810 0.0064 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 1653 1745 0.22 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 437 532 0.024 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 1271 1366 0.028 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 3040 3135 0.0063 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 3874 3969 0.0064 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 3596 3691 0.063 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 1928 2023 0.016 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 2762 2857 0.0078 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 993 1088 0.026 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 2206 2301 0.0071 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00736 2484 2579 0.032 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF53300 5783 6060 2.86E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF141072 4726 4834 5.49E-14 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6180 6198 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00237 4606 4700 8.8E-5 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00237 4715 4812 0.067 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF141072 4495 4613 2.35E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 3036 3130 8.0E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 711 804 5.2E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 2202 2295 2.3E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 989 1082 2.6E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 433 526 1.5E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 1924 2017 2.7E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 1649 1739 7.0E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 3592 3685 6.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 2758 2851 2.3E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 3870 3963 5.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 3314 3407 3.8E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 1267 1360 1.8E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.10 2480 2573 3.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00327 5821 5995 8.2E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF49313 4859 4943 1.13E-11 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SMART SM00112 4875 4952 1.4E-7 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.60 4852 4949 1.3E-13 T 12-10-2018 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.2030 4616 4723 2.9E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Gene3D G3DSA:2.60.40.2030 4726 4837 2.9E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF141072 4377 4490 1.11E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 Pfam PF00028 Cadherin domain 4860 4942 1.8E-9 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 K04M3_16630 9ba9320b544061d92dd31b35a883798f 6314 SUPERFAMILY SSF51120 6090 6260 2.22E-23 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_33350 611bbc1e34f7e8fa8d8ad09079d3d283 214 Gene3D G3DSA:3.40.50.1390 3 125 4.8E-15 T 12-10-2018 K04M3_33350 611bbc1e34f7e8fa8d8ad09079d3d283 214 Pfam PF02796 Helix-turn-helix domain of resolvase 149 190 1.0E-6 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 K04M3_33350 611bbc1e34f7e8fa8d8ad09079d3d283 214 SMART SM00857 3 134 2.7E-10 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_33350 611bbc1e34f7e8fa8d8ad09079d3d283 214 SUPERFAMILY SSF53041 1 139 4.58E-19 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 K04M3_33350 611bbc1e34f7e8fa8d8ad09079d3d283 214 Pfam PF00239 Resolvase, N terminal domain 4 139 4.3E-16 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_42480 4b8e3d227e084b12f4bb48f93c48fe99 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 186 2.0E-29 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_42480 4b8e3d227e084b12f4bb48f93c48fe99 204 Pfam PF00929 Exonuclease 8 163 5.7E-31 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_42480 4b8e3d227e084b12f4bb48f93c48fe99 204 Gene3D G3DSA:3.30.420.10 2 175 1.0E-48 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_42480 4b8e3d227e084b12f4bb48f93c48fe99 204 SUPERFAMILY SSF53098 4 176 2.07E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_42480 4b8e3d227e084b12f4bb48f93c48fe99 204 SMART SM00479 6 173 2.1E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_11940 ec4fa4f27a8ac1fc11ad0f5f5ea773e3 548 SUPERFAMILY SSF53383 29 530 2.85E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_11940 ec4fa4f27a8ac1fc11ad0f5f5ea773e3 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 3.4E-299 T 12-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 K04M3_11940 ec4fa4f27a8ac1fc11ad0f5f5ea773e3 548 Gene3D G3DSA:3.90.1150.170 51 524 7.1E-115 T 12-10-2018 K04M3_11940 ec4fa4f27a8ac1fc11ad0f5f5ea773e3 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 8.5E-57 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 K04M3_11940 ec4fa4f27a8ac1fc11ad0f5f5ea773e3 548 Gene3D G3DSA:3.40.640.10 122 387 7.1E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_33590 4a17a3b607ed72a4195189f07c0e1282 538 Pfam PF04231 Endonuclease I 294 530 4.2E-103 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 K04M3_33590 4a17a3b607ed72a4195189f07c0e1282 538 SUPERFAMILY SSF49785 22 164 2.75E-21 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_33590 4a17a3b607ed72a4195189f07c0e1282 538 Pfam PF02018 Carbohydrate binding domain 22 143 1.9E-7 T 12-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 K04M3_33590 4a17a3b607ed72a4195189f07c0e1282 538 Gene3D G3DSA:2.60.120.260 22 177 4.9E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_33590 4a17a3b607ed72a4195189f07c0e1282 538 SUPERFAMILY SSF54060 291 530 2.47E-52 T 12-10-2018 K04M3_36510 28d5d6b01ccf42077379c93830e3fbdd 141 PIRSF PIRSF006276 1 141 2.4E-44 T 12-10-2018 IPR006015 Universal stress protein A K04M3_36510 28d5d6b01ccf42077379c93830e3fbdd 141 SUPERFAMILY SSF52402 3 139 4.1E-25 T 12-10-2018 K04M3_36510 28d5d6b01ccf42077379c93830e3fbdd 141 Pfam PF00582 Universal stress protein family 3 138 2.1E-13 T 12-10-2018 IPR006016 UspA K04M3_36510 28d5d6b01ccf42077379c93830e3fbdd 141 Gene3D G3DSA:3.40.50.620 2 141 5.6E-36 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 Gene3D G3DSA:3.30.450.20 182 328 8.7E-12 T 12-10-2018 K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 324 6.8E-66 T 12-10-2018 IPR033462 Cache 3/Cache 2 fusion domain K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 644 8.7E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 Gene3D G3DSA:1.10.287.950 348 678 1.9E-66 T 12-10-2018 K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 SUPERFAMILY SSF58104 378 677 2.75E-63 T 12-10-2018 K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 SUPERFAMILY SSF103190 115 212 2.83E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 SMART SM00304 347 402 0.0026 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_22030 80eabed6de228235821b4b3fbaf10a1f 678 SMART SM00283 417 678 8.1E-68 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 Pfam PF00691 OmpA family 216 308 4.0E-18 T 12-10-2018 IPR006665 OmpA-like domain K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 SUPERFAMILY SSF103088 201 314 7.06E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 SUPERFAMILY SSF56925 23 181 5.49E-34 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 PRINTS PR01021 OMPA domain signature 259 275 5.3E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 PRINTS PR01021 OMPA domain signature 244 259 5.3E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 Gene3D G3DSA:2.40.160.20 13 201 1.6E-43 T 12-10-2018 K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 Pfam PF01389 OmpA-like transmembrane domain 23 180 8.1E-22 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 K04M3_47320 e273aa8b3b94cfb2ab20791ad3096682 326 Gene3D G3DSA:3.30.1330.60 202 315 4.0E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 SMART SM00448 2 115 1.4E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 Gene3D G3DSA:1.10.10.10 129 194 2.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 4.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 SUPERFAMILY SSF52172 3 128 2.56E-20 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 SMART SM00421 135 192 8.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 Pfam PF00072 Response regulator receiver domain 4 115 1.6E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 Gene3D G3DSA:3.40.50.2300 3 128 4.5E-19 T 12-10-2018 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 SUPERFAMILY SSF46894 130 192 4.76E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 5.2E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 5.2E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42870 3dba07cd9afbfe3e41631f92bc24645c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 5.2E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_12090 24fd8a3d9162d6f65df27c35a9b22ddb 218 Gene3D G3DSA:2.60.120.620 1 215 3.8E-54 T 12-10-2018 K04M3_12090 24fd8a3d9162d6f65df27c35a9b22ddb 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 3.6E-54 T 12-10-2018 IPR018724 2OG-Fe dioxygenase K04M3_14960 897e081ad86eabf98a57951e1335bda4 405 SMART SM00471 163 299 2.0E-9 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_14960 897e081ad86eabf98a57951e1335bda4 405 SUPERFAMILY SSF109604 158 329 2.03E-30 T 12-10-2018 K04M3_14960 897e081ad86eabf98a57951e1335bda4 405 Pfam PF01966 HD domain 168 289 1.3E-13 T 12-10-2018 IPR006674 HD domain K04M3_14960 897e081ad86eabf98a57951e1335bda4 405 Pfam PF11871 Domain of unknown function (DUF3391) 9 136 1.3E-16 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 K04M3_14960 897e081ad86eabf98a57951e1335bda4 405 Gene3D G3DSA:1.10.3210.10 13 329 4.2E-69 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82866 299 500 4.05E-48 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82693 39 132 9.42E-26 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82866 808 1035 5.1E-44 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82693 136 332 5.76E-22 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82714 184 273 1.05E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82693 565 674 2.14E-22 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 12-10-2018 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_44980 a559ceeb935731295dba3f9211f3281f 1050 SUPERFAMILY SSF82714 725 810 1.96E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SUPERFAMILY SSF52540 170 425 3.5E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 12-10-2018 IPR004176 Clp, N-terminal K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:1.10.8.60 655 755 2.0E-30 T 12-10-2018 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:1.10.8.60 353 440 5.2E-35 T 12-10-2018 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 1.4E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SUPERFAMILY SSF52540 439 742 1.22E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:1.10.1780.10 1 143 8.7E-43 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SMART SM01086 655 744 2.8E-35 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:3.40.50.300 158 352 1.5E-62 T 12-10-2018 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Gene3D G3DSA:3.40.50.300 441 654 6.9E-76 T 12-10-2018 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 6.7E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 2.1E-47 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SUPERFAMILY SSF81923 1 142 9.16E-59 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SMART SM00382 208 353 2.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_10050 bd6bf72e29a8f98a858e4a6ed11ef6fb 755 SMART SM00382 489 656 5.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_39440 332b38a98ec3a2ce0c06e4f03b5f5047 234 Gene3D G3DSA:2.40.50.140 149 225 1.1E-7 T 12-10-2018 K04M3_39440 332b38a98ec3a2ce0c06e4f03b5f5047 234 SUPERFAMILY SSF50249 143 224 2.86E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_39440 332b38a98ec3a2ce0c06e4f03b5f5047 234 SUPERFAMILY SSF56091 14 140 4.89E-10 T 12-10-2018 K04M3_39440 332b38a98ec3a2ce0c06e4f03b5f5047 234 Pfam PF14743 DNA ligase OB-like domain 155 221 4.1E-13 T 12-10-2018 IPR029319 DNA ligase, OB-like domain K04M3_11320 0079ad21dd1a0e313f89c2a2536d047c 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.1E-25 T 12-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE K04M3_11320 0079ad21dd1a0e313f89c2a2536d047c 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 3.7E-29 T 12-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE K04M3_48590 f74dc1066278d441d9d282e33ba49c1c 232 SUPERFAMILY SSF48317 19 215 1.44E-20 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily K04M3_48590 f74dc1066278d441d9d282e33ba49c1c 232 Gene3D G3DSA:1.20.144.10 1 226 4.1E-46 T 12-10-2018 K04M3_48590 f74dc1066278d441d9d282e33ba49c1c 232 SMART SM00014 68 216 6.5E-12 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase K04M3_48590 f74dc1066278d441d9d282e33ba49c1c 232 Pfam PF01569 PAP2 superfamily 74 218 7.8E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.4E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 SMART SM01134 73 233 5.8E-62 T 12-10-2018 K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 SMART SM00420 6 58 9.8E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 Pfam PF00455 DeoR C terminal sensor domain 75 232 9.8E-48 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 SUPERFAMILY SSF46785 5 58 4.37E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 SUPERFAMILY SSF100950 75 233 2.93E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_36290 cbf68c97f04864dc7a4186c6c93bb7bc 252 Gene3D G3DSA:1.10.10.10 1 60 6.4E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.4E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 Gene3D G3DSA:3.40.190.10 44 353 1.8E-134 T 12-10-2018 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 Gene3D G3DSA:3.40.190.10 134 384 1.8E-134 T 12-10-2018 K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 4.9E-44 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_35910 2949b7ce99341cd27febf860a35b8ba0 392 SUPERFAMILY SSF53850 24 391 1.55E-89 T 12-10-2018 K04M3_02680 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02680 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02680 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.8E-40 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 K04M3_02680 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_02680 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 110 1.5E-48 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_02680 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.1E-48 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SMART SM00889 485 603 5.5E-76 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SMART SM00838 605 693 4.8E-57 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF50447 271 409 2.65E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.994 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.30.230.10 489 693 3.1E-92 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.0E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF54211 484 604 7.08E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 7.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 7.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 7.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 7.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.30.70.870 410 485 3.6E-32 T 12-10-2018 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF00009 Elongation factor Tu GTP binding domain 10 288 1.2E-65 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 187 5.8E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.40.50.300 1 298 2.8E-114 T 12-10-2018 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF54980 608 695 2.45E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:3.30.70.240 609 680 3.1E-92 T 12-10-2018 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF00679 Elongation factor G C-terminus 605 692 1.0E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Pfam PF14492 Elongation Factor G, domain II 409 483 5.7E-33 T 12-10-2018 K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 SUPERFAMILY SSF52540 6 288 4.35E-105 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29110 ce39ca9ea0908f9f231da8ce2afb3063 699 Gene3D G3DSA:2.40.30.10 299 405 4.2E-48 T 12-10-2018 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.4E-86 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 Gene3D G3DSA:2.30.130.10 249 312 2.9E-23 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 SUPERFAMILY SSF55120 9 247 5.18E-84 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.024 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 8.5E-57 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 Gene3D G3DSA:3.30.2350.10 1 248 7.1E-95 T 12-10-2018 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 5.0E-19 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 SUPERFAMILY SSF88697 250 310 1.09E-14 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_25610 c55774d17f9517562e57e7c403b9b77f 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.8E-24 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 2492 2603 9.68E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1074 1200 7.59E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 2106 2232 2.49E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 2352 2452 0.038 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 178 258 0.11 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1190 1291 0.033 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 2223 2323 0.038 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1963 2065 0.007 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 2094 2194 0.038 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 416 517 0.04 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1577 1678 0.036 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1835 1936 0.021 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 545 646 0.04 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 674 775 0.04 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 931 1033 0.018 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 286 388 0.0027 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1318 1420 0.024 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 2481 2581 0.12 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 802 904 0.007 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1063 1162 0.093 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1506 1549 0.11 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF03160 Calx-beta domain 1706 1807 0.077 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF53300 3228 3387 4.26E-19 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1590 1716 3.4E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 816 942 3.14E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SMART SM00327 3227 3386 3.2E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1461 1587 4.32E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:3.40.50.410 3230 3398 2.8E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1332 1458 1.18E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1977 2103 2.09E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 687 813 6.93E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1203 1329 6.54E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 421 537 1.7E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 1715 1827 5.0E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 1969 2085 2.4E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 550 666 1.7E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 808 924 2.4E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 1584 1698 2.6E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 1844 1956 3.1E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 295 408 1.3E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 2493 2602 1.8E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 153 279 2.5E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 1196 1311 2.5E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Gene3D G3DSA:2.60.40.2030 679 795 1.7E-5 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 2364 2490 2.22E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 945 1071 3.66E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1848 1974 6.8E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 299 426 6.02E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 1719 1845 4.71E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 Pfam PF13519 von Willebrand factor type A domain 3232 3339 6.8E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 558 684 7.59E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 429 555 9.29E-13 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 150 278 4.45E-11 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_16600 c50cdf309c1cf4ccff21eb684773a782 3671 SUPERFAMILY SSF141072 2235 2361 1.7E-12 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_09630 cf6e223c01908cf7bc0af00c577269c4 180 SUPERFAMILY SSF53474 2 168 6.7E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_09630 cf6e223c01908cf7bc0af00c577269c4 180 Gene3D G3DSA:3.40.50.1820 1 179 4.3E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_09630 cf6e223c01908cf7bc0af00c577269c4 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.7E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA K04M3_09630 cf6e223c01908cf7bc0af00c577269c4 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.234 T 12-10-2018 IPR022987 Uncharacterised protein family UPF0227 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 SUPERFAMILY SSF89000 297 462 1.22E-52 T 12-10-2018 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 Pfam PF00364 Biotin-requiring enzyme 528 592 1.2E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 Gene3D G3DSA:2.40.50.100 520 594 4.6E-23 T 12-10-2018 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 Pfam PF02436 Conserved carboxylase domain 292 493 7.3E-60 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 3.3E-268 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 Gene3D G3DSA:3.20.20.70 1 464 1.3E-174 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 SUPERFAMILY SSF51230 519 593 2.09E-20 T 12-10-2018 IPR011053 Single hybrid motif K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 Pfam PF00682 HMGL-like 6 270 7.9E-60 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 K04M3_26480 3b90ffd9e9f13da73f28987d5d8a4d03 594 SUPERFAMILY SSF51569 1 300 7.14E-90 T 12-10-2018 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 Gene3D G3DSA:1.10.287.1050 1 79 2.0E-20 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 SUPERFAMILY SSF81273 87 125 8.24E-9 T 12-10-2018 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 SMART SM00528 82 124 5.0E-16 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 Gene3D G3DSA:4.10.430.10 86 126 9.9E-18 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 SUPERFAMILY SSF81273 2 54 7.46E-13 T 12-10-2018 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 PIRSF PIRSF002096 1 124 5.5E-41 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_19090 39ad40e340ca358d3c76b946dd39e4a2 126 Pfam PF00816 H-NS histone family 28 115 1.8E-15 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_35370 8697341f4e2539221adda6f85c7b0849 603 Pfam PF13519 von Willebrand factor type A domain 88 194 3.2E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_35370 8697341f4e2539221adda6f85c7b0849 603 SUPERFAMILY SSF48452 350 446 4.52E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_35370 8697341f4e2539221adda6f85c7b0849 603 Gene3D G3DSA:1.25.40.10 340 458 2.8E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_35370 8697341f4e2539221adda6f85c7b0849 603 Gene3D G3DSA:3.40.50.410 84 283 4.4E-31 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_35370 8697341f4e2539221adda6f85c7b0849 603 SMART SM00327 84 284 4.0E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_35370 8697341f4e2539221adda6f85c7b0849 603 SUPERFAMILY SSF53300 87 270 1.7E-18 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 384 4.2E-42 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 396 1.9E-163 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 Gene3D G3DSA:3.40.50.1100 17 212 2.4E-166 T 12-10-2018 K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 SUPERFAMILY SSF53686 10 395 3.54E-132 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 Gene3D G3DSA:3.40.50.1100 61 390 2.4E-166 T 12-10-2018 K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 PIRSF PIRSF001413 1 403 8.3E-172 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_37760 4c51165d2044d97ed3e1a5a962666a39 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 48.341 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_01810 95b1d5280bc9a0734668169c0ced38cb 288 SUPERFAMILY SSF53448 1 287 9.91E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01810 95b1d5280bc9a0734668169c0ced38cb 288 Gene3D G3DSA:3.90.550.10 1 288 2.6E-86 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01810 95b1d5280bc9a0734668169c0ced38cb 288 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 6.6E-158 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 K04M3_01810 95b1d5280bc9a0734668169c0ced38cb 288 Pfam PF00483 Nucleotidyl transferase 2 238 2.9E-74 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 K04M3_49270 a8cf78ed65b7cc27aac18870f35fefb5 231 Pfam PF02678 Pirin 12 119 1.3E-33 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 K04M3_49270 a8cf78ed65b7cc27aac18870f35fefb5 231 Gene3D G3DSA:2.60.120.10 7 231 2.4E-83 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_49270 a8cf78ed65b7cc27aac18870f35fefb5 231 PIRSF PIRSF006232 1 230 5.4E-55 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 K04M3_49270 a8cf78ed65b7cc27aac18870f35fefb5 231 SUPERFAMILY SSF51182 1 230 3.2E-72 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_49270 a8cf78ed65b7cc27aac18870f35fefb5 231 Gene3D G3DSA:2.60.120.10 11 135 2.4E-83 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 297 893 4.5E-184 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 797 4.5E-48 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 SUPERFAMILY SSF55008 1 62 1.57E-7 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 316 892 2.5E-183 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 SUPERFAMILY SSF56784 583 889 2.57E-60 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 856 870 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 204 224 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 174 188 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 506 520 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 568 583 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 301 320 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 373 391 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00943 Copper-transporting ATPase signature 760 777 8.3E-14 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 587 593 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Gene3D G3DSA:3.30.70.100 64 127 3.4E-5 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 SUPERFAMILY SSF81665 349 849 9.42E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 SUPERFAMILY SSF81653 386 483 1.44E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Gene3D G3DSA:3.40.50.1000 566 835 2.8E-95 T 12-10-2018 IPR023214 HAD superfamily K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 719 1.2E-27 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 783 802 1.2E-27 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 806 818 1.2E-27 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 1.2E-27 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 599 1.2E-27 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 740 1.2E-27 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Pfam PF00122 E1-E2 ATPase 384 564 3.3E-48 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 355 861 6.0E-92 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Gene3D G3DSA:3.40.1110.10 596 715 2.8E-95 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 ProSitePatterns PS01047 Heavy-metal-associated domain. 164 193 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Pfam PF00403 Heavy-metal-associated domain 6 61 9.6E-6 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Pfam PF00403 Heavy-metal-associated domain 164 223 2.4E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Gene3D G3DSA:2.70.150.20 371 487 5.1E-36 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Gene3D G3DSA:3.30.70.100 6 63 1.5E-6 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 SUPERFAMILY SSF55008 65 126 1.44E-6 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 Gene3D G3DSA:3.30.70.100 145 235 2.2E-19 T 12-10-2018 K04M3_07530 7e52eb069547c711953f32855ba1bdac 898 SUPERFAMILY SSF55008 159 228 3.93E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 K04M3_09280 15632a3c29946e38dfdabe132668f765 475 Pfam PF00501 AMP-binding enzyme 16 377 1.7E-45 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_09280 15632a3c29946e38dfdabe132668f765 475 Gene3D G3DSA:3.40.50.12780 9 372 5.1E-59 T 12-10-2018 K04M3_09280 15632a3c29946e38dfdabe132668f765 475 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 465 6.3E-127 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 K04M3_09280 15632a3c29946e38dfdabe132668f765 475 SUPERFAMILY SSF56801 13 470 2.49E-80 T 12-10-2018 K04M3_09280 15632a3c29946e38dfdabe132668f765 475 Pfam PF13193 AMP-binding enzyme C-terminal domain 386 451 2.3E-5 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_09280 15632a3c29946e38dfdabe132668f765 475 Gene3D G3DSA:3.30.300.30 373 472 1.2E-15 T 12-10-2018 K04M3_09280 15632a3c29946e38dfdabe132668f765 475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 Gene3D G3DSA:1.25.40.10 183 283 2.0E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 Pfam PF08238 Sel1 repeat 212 242 2.0E-5 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 Pfam PF08238 Sel1 repeat 143 169 26.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 Pfam PF08238 Sel1 repeat 194 206 15.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 Pfam PF08238 Sel1 repeat 79 97 0.049 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 SUPERFAMILY SSF81901 77 281 1.9E-27 T 12-10-2018 K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 SMART SM00671 135 170 29.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 SMART SM00671 243 276 150.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 SMART SM00671 207 242 1.2E-4 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 SMART SM00671 171 206 120.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 SMART SM00671 67 97 270.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_33610 4569a2e4b7cc40609deebe9d72e7a2a4 398 Gene3D G3DSA:1.25.40.10 24 182 6.6E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Gene3D G3DSA:1.10.460.10 131 556 4.1E-124 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 SMART SM00437 254 520 8.7E-86 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Gene3D G3DSA:2.70.20.10 179 467 4.1E-124 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Pfam PF01751 Toprim domain 3 109 8.5E-30 T 12-10-2018 IPR006171 TOPRIM domain K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 657 42.238 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 SMART SM00436 100 187 4.7E-35 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 291 305 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 SUPERFAMILY SSF56712 1 591 7.19E-158 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Gene3D G3DSA:1.10.290.10 262 392 4.1E-124 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 SMART SM00493 1 99 2.2E-26 T 12-10-2018 IPR006171 TOPRIM domain K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Gene3D G3DSA:3.40.50.140 1 130 5.2E-47 T 12-10-2018 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 157 175 1.6E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 377 393 1.6E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 296 305 1.6E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 73 86 1.6E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 483 497 1.6E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 583 7.5E-167 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 K04M3_51040 1cd599b54bc1f1b3ee48fca703924552 1074 Pfam PF01131 DNA topoisomerase 124 556 8.3E-106 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.4E-10 T 12-10-2018 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.4E-10 T 12-10-2018 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.4E-10 T 12-10-2018 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.4E-10 T 12-10-2018 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 5.3E-123 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 Gene3D G3DSA:3.50.50.60 5 336 8.4E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 Pfam PF01494 FAD binding domain 4 335 5.0E-21 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 Gene3D G3DSA:3.30.9.50 81 270 8.4E-97 T 12-10-2018 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 1.5E-146 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 K04M3_27000 0ded9fb27214c318a3acf24dac89ffd1 392 SUPERFAMILY SSF51905 3 382 1.1E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_11220 196d9122c20780868ed55c11b42ba596 460 SMART SM00840 341 402 1.2E-27 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.244 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 SUPERFAMILY SSF47323 316 459 2.48E-40 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 Gene3D G3DSA:1.20.120.640 306 460 1.7E-51 T 12-10-2018 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.9E-191 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.5E-141 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 SUPERFAMILY SSF52374 1 313 1.05E-103 T 12-10-2018 K04M3_11220 196d9122c20780868ed55c11b42ba596 460 Gene3D G3DSA:3.40.50.620 1 305 4.5E-138 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_11220 196d9122c20780868ed55c11b42ba596 460 Pfam PF09190 DALR domain 341 402 1.1E-24 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.2E-152 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 Gene3D G3DSA:3.80.30.20 145 377 5.4E-84 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 Pfam PF01938 TRAM domain 379 440 4.2E-17 T 12-10-2018 IPR002792 TRAM domain K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 Gene3D G3DSA:3.40.50.12160 3 138 2.0E-34 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.081 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 SMART SM00729 147 367 5.5E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 SUPERFAMILY SSF102114 123 374 8.11E-62 T 12-10-2018 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.8E-30 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 K04M3_07090 ce2dc8d1484bdab4460aae1ed1942b79 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 4.3E-199 T 12-10-2018 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 Gene3D G3DSA:3.20.20.60 2 420 6.7E-183 T 12-10-2018 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 Pfam PF00463 Isocitrate lyase family 259 437 4.3E-53 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 Pfam PF00463 Isocitrate lyase family 15 258 1.4E-62 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 3.0E-90 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 7.0E-115 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 SUPERFAMILY SSF51621 6 437 3.36E-153 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_05580 e4598b22b4f57cd0d200cb927e18b479 437 PIRSF PIRSF001362 1 437 2.4E-224 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 22.698 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 SUPERFAMILY SSF48295 2 94 1.88E-27 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 Pfam PF01371 Trp repressor protein 8 92 3.0E-30 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 2.0E-30 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 PIRSF PIRSF003196 1 99 8.7E-38 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 91 3.8E-25 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 K04M3_05200 cc1815bcc21c08f407bf1e59b5cf1a36 102 Gene3D G3DSA:1.10.1270.10 1 98 2.8E-31 T 12-10-2018 IPR038116 TrpR-like superfamily K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 Gene3D G3DSA:3.40.190.10 163 263 1.4E-72 T 12-10-2018 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 Gene3D G3DSA:3.40.190.10 92 289 1.4E-72 T 12-10-2018 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.0E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 SUPERFAMILY SSF53850 89 294 4.65E-51 T 12-10-2018 K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 Pfam PF03466 LysR substrate binding domain 88 292 4.3E-50 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 SUPERFAMILY SSF46785 6 88 4.41E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_47650 3038d1a4e3ce32208d7f32646839ac94 307 Gene3D G3DSA:1.10.10.10 3 91 2.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_01180 4f4262183d2acabec0a4734fc2c0d9fd 308 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 246 272 - T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 K04M3_01180 4f4262183d2acabec0a4734fc2c0d9fd 308 Pfam PF11356 Type II secretion system protein C 37 177 3.8E-44 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal K04M3_01180 4f4262183d2acabec0a4734fc2c0d9fd 308 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 308 7.9E-75 T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 K04M3_01180 4f4262183d2acabec0a4734fc2c0d9fd 308 SUPERFAMILY SSF50156 212 308 1.71E-19 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_01180 4f4262183d2acabec0a4734fc2c0d9fd 308 Gene3D G3DSA:2.30.42.10 205 308 6.7E-27 T 12-10-2018 K04M3_01180 4f4262183d2acabec0a4734fc2c0d9fd 308 Gene3D G3DSA:2.30.30.830 111 177 2.4E-28 T 12-10-2018 K04M3_09310 41eec6a9969f44b5ac0b8b1ac1edc5a7 624 SMART SM00563 456 570 3.9E-35 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_09310 41eec6a9969f44b5ac0b8b1ac1edc5a7 624 SUPERFAMILY SSF69593 405 605 2.35E-29 T 12-10-2018 K04M3_09310 41eec6a9969f44b5ac0b8b1ac1edc5a7 624 SUPERFAMILY SSF103473 12 424 2.62E-26 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_09310 41eec6a9969f44b5ac0b8b1ac1edc5a7 624 Pfam PF07690 Major Facilitator Superfamily 20 315 1.3E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_09310 41eec6a9969f44b5ac0b8b1ac1edc5a7 624 Gene3D G3DSA:1.20.1250.20 11 421 1.0E-25 T 12-10-2018 K04M3_09310 41eec6a9969f44b5ac0b8b1ac1edc5a7 624 Pfam PF01553 Acyltransferase 442 567 1.1E-24 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 Gene3D G3DSA:3.30.450.20 59 174 1.5E-11 T 12-10-2018 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 SUPERFAMILY SSF55874 530 684 6.16E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_48010 56f588257961e7839a3cebeca55c5980 686 Pfam PF13426 PAS domain 324 427 6.9E-6 T 12-10-2018 IPR000014 PAS domain K04M3_48010 56f588257961e7839a3cebeca55c5980 686 Gene3D G3DSA:3.30.450.20 311 445 2.1E-13 T 12-10-2018 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 684 4.5E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_48010 56f588257961e7839a3cebeca55c5980 686 Gene3D G3DSA:1.10.287.130 446 532 2.2E-13 T 12-10-2018 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 PIRSF PIRSF036431 316 686 5.1E-103 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) K04M3_48010 56f588257961e7839a3cebeca55c5980 686 PIRSF PIRSF036431 1 334 2.4E-41 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) K04M3_48010 56f588257961e7839a3cebeca55c5980 686 SUPERFAMILY SSF47384 457 532 1.14E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 3.7E-14 T 12-10-2018 IPR000014 PAS domain K04M3_48010 56f588257961e7839a3cebeca55c5980 686 SMART SM00086 389 429 4.9E-5 T 12-10-2018 IPR001610 PAC motif K04M3_48010 56f588257961e7839a3cebeca55c5980 686 SUPERFAMILY SSF55785 325 438 8.05E-13 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_48010 56f588257961e7839a3cebeca55c5980 686 Gene3D G3DSA:3.30.565.10 537 686 6.9E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_48010 56f588257961e7839a3cebeca55c5980 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 6.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 6.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 6.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_48010 56f588257961e7839a3cebeca55c5980 686 SMART SM00387 577 685 5.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 1.8E-108 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 Pfam PF00551 Formyl transferase 6 182 1.7E-47 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.901 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 SUPERFAMILY SSF53328 5 210 3.92E-67 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 SUPERFAMILY SSF50486 208 310 4.32E-33 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 Gene3D G3DSA:3.40.50.170 1 209 2.0E-87 T 12-10-2018 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 Gene3D G3DSA:3.10.25.10 210 314 3.2E-37 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_31960 79fd5c8ffbd8728692ae3f24774c5d53 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.9E-29 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 161 8.0E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Pfam PF16193 AAA C-terminal domain 192 270 1.7E-21 T 12-10-2018 IPR032423 AAA C-terminal domain K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 SUPERFAMILY SSF52540 13 238 1.22E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Gene3D G3DSA:1.10.3710.10 349 450 1.2E-36 T 12-10-2018 K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Pfam PF12002 MgsA AAA+ ATPase C terminal 271 437 2.7E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Gene3D G3DSA:1.20.272.10 244 348 1.3E-43 T 12-10-2018 K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 SUPERFAMILY SSF48019 255 437 3.8E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Gene3D G3DSA:1.10.8.60 168 243 1.4E-23 T 12-10-2018 K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 SMART SM00382 52 168 1.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_10830 f81d4cb7ba645a6ff8f128827f0d5d29 451 Gene3D G3DSA:3.40.50.300 5 167 1.4E-48 T 12-10-2018 K04M3_40930 f9fd61105eda8c2175ad01c15f2f9cc2 154 Pfam PF12472 Phage related protein 63 119 1.0E-19 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 K04M3_23770 49592d0168379ff388fc8c08647affe3 252 PIRSF PIRSF005457 1 252 4.6E-98 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 K04M3_23770 49592d0168379ff388fc8c08647affe3 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.506 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 K04M3_23770 49592d0168379ff388fc8c08647affe3 252 SMART SM00849 12 166 1.1E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_23770 49592d0168379ff388fc8c08647affe3 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.2E-26 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 K04M3_23770 49592d0168379ff388fc8c08647affe3 252 SUPERFAMILY SSF56281 2 252 2.75E-68 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_23770 49592d0168379ff388fc8c08647affe3 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.6E-103 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 K04M3_23770 49592d0168379ff388fc8c08647affe3 252 Gene3D G3DSA:3.60.15.10 1 252 3.6E-92 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 SUPERFAMILY SSF48179 610 703 2.98E-26 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 SUPERFAMILY SSF51735 310 491 3.2E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 9.0E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 3.2E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 SUPERFAMILY SSF52096 3 304 3.1E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Gene3D G3DSA:3.40.50.720 311 496 1.0E-57 T 12-10-2018 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 218 2.7E-40 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.039 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Gene3D G3DSA:3.90.226.10 1 307 7.3E-98 T 12-10-2018 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 SUPERFAMILY SSF48179 494 593 3.06E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 7.5E-54 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 K04M3_22450 65e6fa351cf98b89c5c26f832e66d481 703 Gene3D G3DSA:1.10.1040.50 497 698 4.2E-71 T 12-10-2018 K04M3_40390 70293cf04df2d731fd1fbb6bc8f929bf 156 SUPERFAMILY SSF102114 23 117 3.14E-8 T 12-10-2018 K04M3_40390 70293cf04df2d731fd1fbb6bc8f929bf 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 K04M3_40390 70293cf04df2d731fd1fbb6bc8f929bf 156 Gene3D G3DSA:3.20.20.70 2 156 8.3E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_40390 70293cf04df2d731fd1fbb6bc8f929bf 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 6.6E-53 T 12-10-2018 K04M3_40390 70293cf04df2d731fd1fbb6bc8f929bf 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 1.3E-62 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 K04M3_40390 70293cf04df2d731fd1fbb6bc8f929bf 156 PIRSF PIRSF000368 1 156 4.4E-61 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-101 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.30.499.10 683 865 2.4E-72 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 PIRSF PIRSF036687 1 859 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.40.1060.10 385 681 7.1E-150 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 5.6E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.30.499.10 402 529 7.1E-150 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 SUPERFAMILY SSF52016 162 372 2.35E-72 T 12-10-2018 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.7E-67 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 SUPERFAMILY SSF74778 2 160 5.75E-68 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 SUPERFAMILY SSF53732 379 861 6.28E-148 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:1.25.40.310 1 161 4.8E-72 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 K04M3_26030 7b5e2c1340e2fcedb39e467406456d4a 865 Gene3D G3DSA:3.20.19.10 162 361 1.6E-81 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 Gene3D G3DSA:3.40.50.300 116 295 4.2E-66 T 12-10-2018 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 Pfam PF00158 Sigma-54 interaction domain 126 291 3.9E-70 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 SUPERFAMILY SSF52172 1 170 4.7E-19 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 Gene3D G3DSA:1.10.8.60 296 371 2.4E-23 T 12-10-2018 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 Gene3D G3DSA:1.10.10.60 376 436 2.0E-11 T 12-10-2018 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 SUPERFAMILY SSF52540 129 364 1.77E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 SUPERFAMILY SSF46689 335 426 8.51E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 211 226 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 149 162 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 394 411 6.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 431 6.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 SMART SM00382 145 288 2.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 Gene3D G3DSA:3.40.50.2300 1 115 5.0E-10 T 12-10-2018 K04M3_34580 78e9b9ede848aa87b6b22b9e8c5a33aa 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 426 2.0E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.3E-151 T 12-10-2018 IPR020823 Cell division protein FtsA K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Pfam PF14450 Cell division protein FtsA 207 381 6.1E-24 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 SMART SM00842 10 196 4.3E-95 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 PIRSF PIRSF003101 1 420 3.1E-147 T 12-10-2018 IPR020823 Cell division protein FtsA K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.30.1490.110 87 169 7.5E-112 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.25 T 12-10-2018 IPR020823 Cell division protein FtsA K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Pfam PF14450 Cell division protein FtsA 11 182 1.1E-7 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 SUPERFAMILY SSF53067 198 384 2.52E-45 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.30.420.40 197 359 7.5E-112 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.30.420.40 13 379 7.5E-112 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 SUPERFAMILY SSF53067 8 221 7.25E-60 T 12-10-2018 K04M3_04330 24c5c831e9f73961221c871c669bf461 420 Gene3D G3DSA:3.90.640.10 235 300 7.5E-112 T 12-10-2018 K04M3_11330 9a0ec4f181dd68123ec052ef43994aa6 394 SUPERFAMILY SSF48695 12 187 7.69E-60 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_11330 9a0ec4f181dd68123ec052ef43994aa6 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 1.4E-71 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal K04M3_11330 9a0ec4f181dd68123ec052ef43994aa6 394 PIRSF PIRSF000014 1 394 1.9E-159 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 K04M3_11330 9a0ec4f181dd68123ec052ef43994aa6 394 Gene3D G3DSA:1.10.3820.10 15 192 2.9E-38 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily K04M3_11330 9a0ec4f181dd68123ec052ef43994aa6 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.2E-186 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 Pfam PF02311 AraC-like ligand binding domain 33 144 2.9E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 SUPERFAMILY SSF46689 174 225 2.29E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 SUPERFAMILY SSF51215 27 162 1.44E-19 T 12-10-2018 IPR037923 Transcription regulator HTH-like K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 Pfam PF12833 Helix-turn-helix domain 198 275 3.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 SMART SM00342 191 274 1.4E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 Gene3D G3DSA:1.10.10.60 170 280 4.2E-26 T 12-10-2018 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 Gene3D G3DSA:2.60.120.280 30 141 3.2E-8 T 12-10-2018 K04M3_40410 88d9d406800d6061b4cd3ebc34058677 285 SUPERFAMILY SSF46689 227 278 8.06E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 Pfam PF05235 CHAD domain 236 427 3.1E-8 T 12-10-2018 IPR007899 CHAD domain K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 Gene3D G3DSA:1.40.20.10 215 444 1.7E-10 T 12-10-2018 IPR038186 CHAD domain superfamily K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 SMART SM00880 234 502 1.5E-22 T 12-10-2018 IPR007899 CHAD domain K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 SUPERFAMILY SSF55154 1 218 3.6E-51 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 SMART SM01118 2 208 9.6E-43 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 Pfam PF01928 CYTH domain 3 202 2.5E-31 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 K04M3_03920 c46f5c44bb53c85522483dd69d19f91d 510 Gene3D G3DSA:2.40.320.10 1 204 5.3E-35 T 12-10-2018 K04M3_05700 b1ba6a472ebb5025db32f762b2590a97 158 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 158 46.151 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 K04M3_05700 b1ba6a472ebb5025db32f762b2590a97 158 Pfam PF02082 Transcriptional regulator 1 73 3.8E-22 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type K04M3_05700 b1ba6a472ebb5025db32f762b2590a97 158 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 120 8.7E-42 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type K04M3_05700 b1ba6a472ebb5025db32f762b2590a97 158 SUPERFAMILY SSF46785 1 123 1.2E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_05700 b1ba6a472ebb5025db32f762b2590a97 158 Gene3D G3DSA:1.10.10.10 1 134 7.1E-48 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_05700 b1ba6a472ebb5025db32f762b2590a97 158 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 39 57 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 SUPERFAMILY SSF51120 10 206 1.12E-27 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Gene3D G3DSA:2.150.10.10 88 231 4.3E-14 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 37 50 2.2 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 58.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.024 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 70 86 0.0051 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 51 67 0.0051 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 Gene3D G3DSA:2.150.10.10 29 87 6.5E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 PRINTS PR00313 NodO calcium binding signature 88 96 1.2E-11 T 12-10-2018 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 PRINTS PR00313 NodO calcium binding signature 106 114 1.2E-11 T 12-10-2018 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 PRINTS PR00313 NodO calcium binding signature 124 133 1.2E-11 T 12-10-2018 K04M3_20140 8979094d5a8bfdbec548e28485bf2820 236 PRINTS PR00313 NodO calcium binding signature 76 87 1.2E-11 T 12-10-2018 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 222 6.1E-48 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 SUPERFAMILY SSF53790 6 250 1.13E-78 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 Gene3D G3DSA:3.40.1010.10 10 126 3.8E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 Gene3D G3DSA:3.30.950.10 127 252 1.0E-44 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 K04M3_40060 0b54ec418aa9d9058588fa99dc6c60d2 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 1.8E-93 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_31240 f828b550855321b62aae8213d79a0b88 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 9.6E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_31240 f828b550855321b62aae8213d79a0b88 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 9.6E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_31240 f828b550855321b62aae8213d79a0b88 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 9.6E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_31240 f828b550855321b62aae8213d79a0b88 238 SUPERFAMILY SSF56784 9 238 9.67E-41 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_31240 f828b550855321b62aae8213d79a0b88 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 201 3.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_31240 f828b550855321b62aae8213d79a0b88 238 Gene3D G3DSA:3.40.50.1000 11 231 6.9E-61 T 12-10-2018 IPR023214 HAD superfamily K04M3_31240 f828b550855321b62aae8213d79a0b88 238 Gene3D G3DSA:1.20.120.1600 24 110 6.9E-61 T 12-10-2018 K04M3_31240 f828b550855321b62aae8213d79a0b88 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 3.1E-13 T 12-10-2018 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SMART SM00267 473 644 5.4E-58 T 12-10-2018 IPR000160 GGDEF domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Pfam PF00672 HAMP domain 180 228 3.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SMART SM00304 180 233 6.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SUPERFAMILY SSF55785 347 455 1.77E-13 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SUPERFAMILY SSF55785 234 349 6.47E-9 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Gene3D G3DSA:3.30.450.20 357 476 1.8E-12 T 12-10-2018 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Gene3D G3DSA:3.30.70.270 477 646 1.2E-55 T 12-10-2018 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 1.8E-46 T 12-10-2018 IPR000160 GGDEF domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SMART SM00091 247 313 0.0047 T 12-10-2018 IPR000014 PAS domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SMART SM00091 359 425 3.8E-9 T 12-10-2018 IPR000014 PAS domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Gene3D G3DSA:1.20.1480.50 142 237 4.4E-9 T 12-10-2018 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Pfam PF13426 PAS domain 259 350 9.5E-5 T 12-10-2018 IPR000014 PAS domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Pfam PF17152 Periplasmic sensor domain 37 142 4.3E-9 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Gene3D G3DSA:3.30.450.20 238 356 2.5E-10 T 12-10-2018 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SUPERFAMILY SSF158472 180 228 1.57E-7 T 12-10-2018 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 Pfam PF00989 PAS fold 363 408 3.6E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 3.6E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 SUPERFAMILY SSF55073 489 642 2.35E-45 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 247 354 5.3E-6 T 12-10-2018 IPR000014 PAS domain K04M3_41650 739876d872dcbb234f983adfc79e59fe 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 2.8E-11 T 12-10-2018 IPR000014 PAS domain K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Pfam PF01627 Hpt domain 839 918 2.0E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Gene3D G3DSA:3.40.50.2300 669 793 9.3E-40 T 12-10-2018 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 5.4E-53 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SMART SM00448 668 781 5.4E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SUPERFAMILY SSF55874 344 516 3.67E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SMART SM00387 402 518 1.4E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SMART SM00388 290 355 2.9E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SMART SM00073 829 927 6.4E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Gene3D G3DSA:1.20.1480.50 164 270 1.6E-7 T 12-10-2018 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Pfam PF00072 Response regulator receiver domain 670 780 1.6E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SMART SM00304 198 250 3.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 12-10-2018 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SUPERFAMILY SSF52172 533 644 1.76E-7 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 12-10-2018 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Gene3D G3DSA:1.20.120.160 818 932 3.0E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 Gene3D G3DSA:3.30.565.10 357 521 3.8E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 4.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SUPERFAMILY SSF52172 667 784 1.24E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_26810 0e72c2ff174f7c4fc40f2a8af3c2a8ed 932 SUPERFAMILY SSF47226 764 919 1.03E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Hamap MF_01113 DNA polymerase IV [dinB]. 7 310 32.476 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 SUPERFAMILY SSF100879 247 304 2.55E-12 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Pfam PF11798 IMS family HHH motif 172 202 2.0E-5 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Gene3D G3DSA:3.30.70.270 10 170 8.9E-66 T 12-10-2018 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Gene3D G3DSA:2.30.40.20 27 79 8.9E-66 T 12-10-2018 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Gene3D G3DSA:3.30.1490.100 243 306 6.6E-13 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Pfam PF00817 impB/mucB/samB family 13 160 7.9E-48 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 Gene3D G3DSA:1.10.150.20 172 234 6.5E-16 T 12-10-2018 K04M3_24610 9bcf85c7cb7641a72390b58ff8b43264 310 SUPERFAMILY SSF56672 5 240 4.09E-92 T 12-10-2018 K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 SUPERFAMILY SSF51735 4 166 1.77E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 SUPERFAMILY SSF48179 167 290 6.69E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 3.8E-48 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 PIRSF PIRSF000103 1 292 3.0E-78 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Gene3D G3DSA:3.40.50.720 1 166 8.4E-51 T 12-10-2018 K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.3E-31 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 K04M3_35730 d0a3e2b352668e4ff9c7e9aa8560eac7 292 Gene3D G3DSA:1.10.1040.10 167 292 1.3E-37 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.5E-70 T 12-10-2018 K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.6E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 7.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 7.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 SUPERFAMILY SSF51735 5 244 5.31E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_43990 9e635a1b1d476fc6fe632d0fda9d41f4 252 Gene3D G3DSA:3.40.50.720 1 248 8.5E-83 T 12-10-2018 K04M3_16010 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_16010 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16010 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_01150 b03778092373190f34e68a419910c51b 542 Gene3D G3DSA:3.90.228.20 236 526 2.1E-237 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 K04M3_01150 b03778092373190f34e68a419910c51b 542 Gene3D G3DSA:3.40.449.10 25 235 2.1E-237 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 K04M3_01150 b03778092373190f34e68a419910c51b 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.155 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 K04M3_01150 b03778092373190f34e68a419910c51b 542 SUPERFAMILY SSF53795 230 541 9.94E-128 T 12-10-2018 K04M3_01150 b03778092373190f34e68a419910c51b 542 Gene3D G3DSA:2.170.8.10 49 351 2.1E-237 T 12-10-2018 K04M3_01150 b03778092373190f34e68a419910c51b 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 4.0E-212 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 K04M3_01150 b03778092373190f34e68a419910c51b 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-277 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 K04M3_01150 b03778092373190f34e68a419910c51b 542 SUPERFAMILY SSF68923 11 228 2.09E-89 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 K04M3_01150 b03778092373190f34e68a419910c51b 542 PIRSF PIRSF006294 4 541 1.0E-227 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 K04M3_01150 b03778092373190f34e68a419910c51b 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 K04M3_08870 f433caf603866ce9fca6a3db1984f801 122 PIRSF PIRSF030962 1 122 4.1E-49 T 12-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_08870 f433caf603866ce9fca6a3db1984f801 122 SUPERFAMILY SSF54637 12 108 1.84E-15 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_08870 f433caf603866ce9fca6a3db1984f801 122 Gene3D G3DSA:3.10.129.10 3 122 1.0E-33 T 12-10-2018 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 SUPERFAMILY SSF53822 53 317 1.81E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_33430 9b940b6fafa810e380c005234534a75f 318 Gene3D G3DSA:3.40.50.2300 149 276 5.7E-58 T 12-10-2018 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 Gene3D G3DSA:3.40.50.2300 52 296 5.7E-58 T 12-10-2018 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 SMART SM00354 1 62 3.5E-9 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 39 5.5E-9 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 SUPERFAMILY SSF47413 2 50 1.03E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 Gene3D G3DSA:1.10.260.40 1 49 3.1E-15 T 12-10-2018 K04M3_33430 9b940b6fafa810e380c005234534a75f 318 Pfam PF13377 Periplasmic binding protein-like domain 157 317 1.4E-31 T 12-10-2018 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 SMART SM01209 103 296 1.4E-142 T 12-10-2018 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Gene3D G3DSA:3.30.470.20 191 329 2.5E-62 T 12-10-2018 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.1E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.3E-186 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 SMART SM01210 330 423 3.4E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.402 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 SUPERFAMILY SSF52440 1 103 4.6E-37 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Gene3D G3DSA:3.90.600.10 330 429 9.5E-35 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Gene3D G3DSA:3.30.1490.20 121 190 2.9E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Gene3D G3DSA:3.40.50.20 2 95 6.1E-38 T 12-10-2018 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 SUPERFAMILY SSF51246 329 424 3.3E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.2E-29 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 SUPERFAMILY SSF56059 104 319 1.52E-68 T 12-10-2018 K04M3_30420 a5d0676ca19d3cb873c0eb27b254754e 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.7E-83 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_17410 ef1d1f420ddeede095e1833d5a814146 148 Gene3D G3DSA:3.30.1460.10 3 145 4.1E-14 T 12-10-2018 K04M3_17410 ef1d1f420ddeede095e1833d5a814146 148 SUPERFAMILY SSF69635 5 131 9.42E-10 T 12-10-2018 K04M3_17410 ef1d1f420ddeede095e1833d5a814146 148 Pfam PF05932 Tir chaperone protein (CesT) family 9 124 1.2E-8 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 K04M3_34760 f9538caf7ebe04b806aad68e39ee311f 231 Gene3D G3DSA:2.60.40.2130 31 176 6.1E-13 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 K04M3_34760 f9538caf7ebe04b806aad68e39ee311f 231 Pfam PF06468 Spondin_N 45 164 1.4E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 K04M3_09440 cf31f5623996b4944f187b4b36504ac7 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 1.2E-41 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_09440 cf31f5623996b4944f187b4b36504ac7 364 Gene3D G3DSA:3.40.50.1100 51 157 2.8E-68 T 12-10-2018 K04M3_09440 cf31f5623996b4944f187b4b36504ac7 364 Gene3D G3DSA:3.40.50.1100 25 324 2.8E-68 T 12-10-2018 K04M3_09440 cf31f5623996b4944f187b4b36504ac7 364 SUPERFAMILY SSF53686 5 334 8.91E-71 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_29160 c916fd0836f8dea493e3876d8702c7f2 131 SUPERFAMILY SSF75169 6 131 3.53E-39 T 12-10-2018 IPR027396 DsrEFH-like K04M3_29160 c916fd0836f8dea493e3876d8702c7f2 131 Pfam PF02635 DsrE/DsrF-like family 6 131 8.7E-30 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein K04M3_29160 c916fd0836f8dea493e3876d8702c7f2 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 1.8E-55 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 K04M3_29160 c916fd0836f8dea493e3876d8702c7f2 131 Gene3D G3DSA:3.40.1260.10 1 131 4.2E-54 T 12-10-2018 IPR027396 DsrEFH-like K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SUPERFAMILY SSF46689 144 191 6.72E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Pfam PF12833 Helix-turn-helix domain 112 190 1.5E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Pfam PF02805 Metal binding domain of Ada 14 77 6.7E-30 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SMART SM00342 106 189 2.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Gene3D G3DSA:3.30.310.20 200 312 3.7E-24 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Pfam PF06029 AlkA N-terminal domain 201 312 7.9E-33 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Gene3D G3DSA:3.40.10.10 4 79 9.3E-30 T 12-10-2018 IPR035451 Ada-like domain superfamily K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SUPERFAMILY SSF55945 201 293 6.75E-26 T 12-10-2018 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Gene3D G3DSA:1.10.340.30 313 413 6.4E-19 T 12-10-2018 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SUPERFAMILY SSF48150 304 452 2.27E-29 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SMART SM01009 200 312 1.2E-30 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Gene3D G3DSA:1.10.10.60 86 194 1.7E-24 T 12-10-2018 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SUPERFAMILY SSF46689 92 139 1.66E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 318 437 2.1E-5 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 SUPERFAMILY SSF57884 7 91 2.35E-34 T 12-10-2018 IPR035451 Ada-like domain superfamily K04M3_49240 1a5f89d8a655d46e209c8bc7b31c7638 455 Gene3D G3DSA:1.10.1670.10 415 455 6.0E-6 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 Gene3D G3DSA:1.20.1280.70 357 418 3.2E-29 T 12-10-2018 K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 Pfam PF00929 Exonuclease 11 190 1.2E-24 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 PIRSF PIRSF000977 1 473 9.4E-198 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 SUPERFAMILY SSF53098 7 471 1.52E-139 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.9E-103 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 Gene3D G3DSA:3.30.420.10 1 199 3.6E-72 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 Gene3D G3DSA:2.30.30.450 212 350 3.5E-56 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily K04M3_12570 dda3cb46a9b08038872f9ce229e7e88a 473 SMART SM00479 8 201 0.002 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 SMART SM00448 5 117 1.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 Gene3D G3DSA:3.40.50.2300 2 139 1.7E-32 T 12-10-2018 K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 Pfam PF04397 LytTr DNA-binding domain 165 262 7.9E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 SMART SM00850 164 263 4.0E-19 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 Gene3D G3DSA:2.40.50.40 156 228 7.1E-9 T 12-10-2018 K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 Pfam PF00072 Response regulator receiver domain 8 116 9.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_49430 a81cfb5399f0d710d3dadea8f15d1222 263 SUPERFAMILY SSF52172 4 156 4.7E-31 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 Gene3D G3DSA:3.20.20.10 35 277 1.7E-153 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 Gene3D G3DSA:2.40.37.10 17 404 1.7E-153 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.0E-71 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 7.7E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 7.7E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 7.7E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 7.7E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 SUPERFAMILY SSF51419 27 284 1.45E-83 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.456 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.3E-26 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 SUPERFAMILY SSF50621 261 414 1.03E-52 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site K04M3_31280 4c7dc31becd7a5017dd6316dc0ca5b85 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 3.2E-168 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_20420 719adf98cd9c73d5e73b28a7567e48aa 159 Pfam PF04138 GtrA-like protein 37 156 6.9E-22 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 144 173 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 180 202 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 84 108 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 405 421 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 264 280 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 295 311 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PRINTS PR00072 Malic enzyme signature 239 257 2.6E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.039 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 Gene3D G3DSA:3.40.50.10380 13 265 2.4E-115 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 SMART SM01274 78 258 6.6E-108 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 Gene3D G3DSA:3.40.50.720 266 562 1.0E-109 T 12-10-2018 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 12-10-2018 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 5.6E-78 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 PIRSF PIRSF000106 2 560 1.9E-225 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 SMART SM00919 268 528 2.8E-133 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 SUPERFAMILY SSF51735 268 559 2.25E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_12150 4e6cd8bc469bbc8732df23b0a0882016 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.4E-103 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 K04M3_52100 814b5970780ab760f9c8bdd7665cd327 312 SMART SM00244 39 199 1.5E-7 T 12-10-2018 IPR001107 Band 7 domain K04M3_52100 814b5970780ab760f9c8bdd7665cd327 312 TIGRFAM TIGR01933 hflK: HflK protein 42 297 6.2E-60 T 12-10-2018 IPR010201 HflK GO:0016021 K04M3_52100 814b5970780ab760f9c8bdd7665cd327 312 Gene3D G3DSA:3.30.479.30 78 201 1.5E-8 T 12-10-2018 K04M3_52100 814b5970780ab760f9c8bdd7665cd327 312 Pfam PF01145 SPFH domain / Band 7 family 44 213 1.7E-16 T 12-10-2018 IPR001107 Band 7 domain K04M3_52100 814b5970780ab760f9c8bdd7665cd327 312 SUPERFAMILY SSF117892 84 205 8.11E-11 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 Pfam PF00072 Response regulator receiver domain 186 303 2.1E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 SMART SM00260 17 158 7.7E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 SUPERFAMILY SSF52172 183 311 2.85E-21 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 Gene3D G3DSA:3.40.50.2300 183 313 3.9E-21 T 12-10-2018 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 PIRSF PIRSF002867 1 313 1.5E-106 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 SMART SM00448 184 305 3.7E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 Gene3D G3DSA:2.30.30.40 24 152 2.7E-27 T 12-10-2018 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 Gene3D G3DSA:2.40.50.180 39 158 2.7E-27 T 12-10-2018 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 SUPERFAMILY SSF50341 16 163 9.81E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_20920 9648d1f60920c242bdcb67c69cde1c08 317 Pfam PF01584 CheW-like domain 21 160 3.3E-33 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 Pfam PF01145 SPFH domain / Band 7 family 93 264 8.1E-29 T 12-10-2018 IPR001107 Band 7 domain K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 Gene3D G3DSA:3.30.479.30 119 251 1.4E-21 T 12-10-2018 K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 SMART SM00244 89 249 2.1E-51 T 12-10-2018 IPR001107 Band 7 domain K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 TIGRFAM TIGR01933 hflK: HflK protein 91 351 6.3E-121 T 12-10-2018 IPR010201 HflK GO:0016021 K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 SUPERFAMILY SSF117892 126 254 1.23E-21 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.9E-14 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 PRINTS PR00721 Stomatin signature 143 164 2.2E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 PRINTS PR00721 Stomatin signature 96 118 2.2E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_29490 7d1abb16f1f57351fa7a3100c8aaa96c 401 PRINTS PR00721 Stomatin signature 199 222 2.2E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Gene3D G3DSA:2.160.10.10 225 453 3.3E-71 T 12-10-2018 K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 3.8E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 SUPERFAMILY SSF51161 252 434 1.72E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 3.2E-6 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 9.0E-4 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 SUPERFAMILY SSF53448 1 249 4.73E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 3.4E-205 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Gene3D G3DSA:3.90.550.10 1 224 3.7E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_32200 1b08226f19ac82e61ac93971e3d2c149 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.619 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 K04M3_08700 8f5fad70fc8179828ee334faf45281eb 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-35 T 12-10-2018 IPR027354 YcgL domain K04M3_08700 8f5fad70fc8179828ee334faf45281eb 93 Gene3D G3DSA:3.10.510.20 1 73 3.6E-30 T 12-10-2018 IPR038068 YcgL-like superfamily K04M3_08700 8f5fad70fc8179828ee334faf45281eb 93 SUPERFAMILY SSF160191 1 91 1.57E-37 T 12-10-2018 IPR038068 YcgL-like superfamily K04M3_08700 8f5fad70fc8179828ee334faf45281eb 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.365 T 12-10-2018 IPR027354 YcgL domain K04M3_08700 8f5fad70fc8179828ee334faf45281eb 93 Pfam PF05166 YcgL domain 3 74 3.9E-32 T 12-10-2018 IPR027354 YcgL domain K04M3_34530 798eb6c03b9dd00637698d509e58ebb3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.0E-29 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 K04M3_34530 798eb6c03b9dd00637698d509e58ebb3 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.7E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_34530 798eb6c03b9dd00637698d509e58ebb3 89 PIRSF PIRSF004669 1 89 4.6E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_34530 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_34530 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_34530 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.8E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SUPERFAMILY SSF48452 208 398 1.55E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 Gene3D G3DSA:1.25.40.10 50 185 1.4E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 Gene3D G3DSA:1.25.40.10 190 382 1.2E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 541 677 1.7E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 Pfam PF00990 Diguanylate cyclase, GGDEF domain 543 674 4.1E-38 T 12-10-2018 IPR000160 GGDEF domain K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SUPERFAMILY SSF55073 544 676 1.8E-41 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 Pfam PF13181 Tetratricopeptide repeat 237 262 0.0063 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SMART SM00267 517 679 2.8E-40 T 12-10-2018 IPR000160 GGDEF domain K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SUPERFAMILY SSF48452 74 227 8.34E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SMART SM00028 74 107 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SMART SM00028 232 265 12.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_43720 308c3577867ba00ee4bac7c135d4ebf7 682 SMART SM00028 152 185 53.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 7.2E-34 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.2E-205 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.4E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 6.6E-18 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 Gene3D G3DSA:3.30.1360.60 3 78 2.2E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_06860 f0296d868211ebf07e15df1a007ca1e3 474 SUPERFAMILY SSF55604 9 82 3.79E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 SMART SM00382 29 214 1.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 SUPERFAMILY SSF50331 265 342 1.59E-8 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 Gene3D G3DSA:3.40.50.300 1 240 4.1E-76 T 12-10-2018 K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 Pfam PF08402 TOBE domain 276 341 4.6E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 Pfam PF00005 ABC transporter 20 164 2.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_25970 da97459a1e556b73bbda975ee5bc90a3 343 SUPERFAMILY SSF52540 5 243 9.58E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35400 df94712e24cf3420a14cc3d3875ce6da 308 Pfam PF01882 Protein of unknown function DUF58 54 138 9.3E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 SMART SM00382 28 230 6.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 SMART SM00382 344 514 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Gene3D G3DSA:1.10.287.380 555 638 5.3E-29 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Pfam PF00005 ABC transporter 336 469 2.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Gene3D G3DSA:3.40.50.300 281 551 8.6E-69 T 12-10-2018 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 SUPERFAMILY SSF52540 310 518 1.52E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Pfam PF12848 ABC transporter 224 297 3.9E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Gene3D G3DSA:3.40.50.300 4 279 9.9E-69 T 12-10-2018 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Pfam PF00005 ABC transporter 19 185 4.3E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 SUPERFAMILY SSF52540 3 245 9.31E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16280 85be15499683b8a77fe965b97cc8dc29 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 7.9E-22 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 K04M3_14850 ecbd0b0a774aa3a1f56594b9a14582f6 257 Pfam PF00455 DeoR C terminal sensor domain 75 234 2.7E-37 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain K04M3_14850 ecbd0b0a774aa3a1f56594b9a14582f6 257 SMART SM00420 6 58 1.4E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_14850 ecbd0b0a774aa3a1f56594b9a14582f6 257 SUPERFAMILY SSF100950 75 235 7.62E-20 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_14850 ecbd0b0a774aa3a1f56594b9a14582f6 257 Pfam PF08220 DeoR-like helix-turn-helix domain 9 57 8.7E-11 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_14850 ecbd0b0a774aa3a1f56594b9a14582f6 257 SUPERFAMILY SSF46785 4 71 2.09E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_14850 ecbd0b0a774aa3a1f56594b9a14582f6 257 SMART SM01134 71 235 5.0E-45 T 12-10-2018 K04M3_04180 d3d910d833113b5c66aa23ac3ab32788 196 Pfam PF13580 SIS domain 9 144 1.9E-34 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_04180 d3d910d833113b5c66aa23ac3ab32788 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.331 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 K04M3_04180 d3d910d833113b5c66aa23ac3ab32788 196 Gene3D G3DSA:3.40.50.10490 1 195 2.7E-72 T 12-10-2018 K04M3_04180 d3d910d833113b5c66aa23ac3ab32788 196 SUPERFAMILY SSF53697 1 191 1.44E-56 T 12-10-2018 K04M3_15200 1b6ab7752bd47e3a406560a4681307cd 228 Pfam PF03352 Methyladenine glycosylase 42 137 8.9E-16 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 K04M3_15200 1b6ab7752bd47e3a406560a4681307cd 228 Gene3D G3DSA:1.10.340.30 37 164 4.6E-19 T 12-10-2018 K04M3_15200 1b6ab7752bd47e3a406560a4681307cd 228 SUPERFAMILY SSF48150 39 184 1.21E-40 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 K04M3_24010 c9e277294468ec4e21bcb255150716cc 292 SUPERFAMILY SSF55920 3 282 1.83E-81 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like K04M3_24010 c9e277294468ec4e21bcb255150716cc 292 Pfam PF00557 Metallopeptidase family M24 12 271 6.2E-46 T 12-10-2018 IPR000994 Peptidase M24 K04M3_24010 c9e277294468ec4e21bcb255150716cc 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 5.1E-83 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 K04M3_24010 c9e277294468ec4e21bcb255150716cc 292 Gene3D G3DSA:3.90.230.10 1 290 5.1E-104 T 12-10-2018 K04M3_24010 c9e277294468ec4e21bcb255150716cc 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 K04M3_24010 c9e277294468ec4e21bcb255150716cc 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.558 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 K04M3_13460 889f0a6c1faff0348c96efff98250ab2 222 SUPERFAMILY SSF47616 88 220 6.96E-24 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_13460 889f0a6c1faff0348c96efff98250ab2 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 3.7E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_13460 889f0a6c1faff0348c96efff98250ab2 222 Gene3D G3DSA:1.20.1050.10 89 222 5.4E-43 T 12-10-2018 K04M3_13460 889f0a6c1faff0348c96efff98250ab2 222 SUPERFAMILY SSF52833 4 89 1.56E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_13460 889f0a6c1faff0348c96efff98250ab2 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.4E-79 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 K04M3_13460 889f0a6c1faff0348c96efff98250ab2 222 Gene3D G3DSA:3.40.30.10 7 83 1.4E-23 T 12-10-2018 K04M3_09760 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 12-10-2018 IPR005651 Trm112-like K04M3_09760 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 K04M3_09760 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 59 3.0E-24 T 12-10-2018 K04M3_09760 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 12-10-2018 K04M3_46620 84dea7c8f5ea1a268ad8db8920cb891a 293 SUPERFAMILY SSF46785 2 109 5.44E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46620 84dea7c8f5ea1a268ad8db8920cb891a 293 Gene3D G3DSA:3.40.190.290 93 293 2.0E-25 T 12-10-2018 K04M3_46620 84dea7c8f5ea1a268ad8db8920cb891a 293 Gene3D G3DSA:1.10.10.10 1 92 1.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46620 84dea7c8f5ea1a268ad8db8920cb891a 293 Pfam PF03466 LysR substrate binding domain 89 292 1.0E-28 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46620 84dea7c8f5ea1a268ad8db8920cb891a 293 SUPERFAMILY SSF53850 89 292 2.95E-31 T 12-10-2018 K04M3_46620 84dea7c8f5ea1a268ad8db8920cb891a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47350 389a325a87cc0fc1fe1070383777ef35 119 PIRSF PIRSF028299 1 118 2.6E-20 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 K04M3_47350 389a325a87cc0fc1fe1070383777ef35 119 Pfam PF11777 Protein of unknown function (DUF3316) 9 112 2.0E-11 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.6E-58 T 12-10-2018 K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.1E-126 T 12-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 Gene3D G3DSA:3.40.50.720 3 241 9.1E-75 T 12-10-2018 K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0015 T 12-10-2018 K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 SUPERFAMILY SSF51735 3 240 3.05E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08780 3e5c07c99bb8cd86429ed17083b0558f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_10840 ef92d34e79f885e42d217cf111971704 435 Gene3D G3DSA:3.30.930.10 107 434 1.1E-112 T 12-10-2018 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 SUPERFAMILY SSF55681 118 429 2.74E-97 T 12-10-2018 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 PIRSF PIRSF001529 1 435 1.5E-186 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 Gene3D G3DSA:1.10.287.40 1 106 4.4E-21 T 12-10-2018 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.07 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 3.4E-172 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 SUPERFAMILY SSF46589 1 114 1.31E-27 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 4.7E-35 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10840 ef92d34e79f885e42d217cf111971704 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 6.8E-30 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 SUPERFAMILY SSF48024 18 129 3.53E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 6.1E-35 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 SUPERFAMILY SSF52540 197 449 8.59E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 Gene3D G3DSA:3.40.50.300 177 456 3.0E-106 T 12-10-2018 K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 6.2E-113 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.1E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 K04M3_28740 bf680fce808b796dcecccb25f6470eef 466 Gene3D G3DSA:1.10.860.10 12 176 1.4E-52 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-43 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 Gene3D G3DSA:3.40.190.10 164 267 2.1E-65 T 12-10-2018 K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 SUPERFAMILY SSF53850 89 297 5.32E-40 T 12-10-2018 K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 Gene3D G3DSA:3.40.190.10 91 281 2.1E-65 T 12-10-2018 K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 Gene3D G3DSA:1.10.10.10 1 84 9.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 SUPERFAMILY SSF46785 1 111 2.23E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.4E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_28910 7bac8bc31d148ffb253f2666f7ba1a99 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16560 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.3E-43 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE K04M3_16560 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE K04M3_16560 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 39 109 9.9E-31 T 12-10-2018 K04M3_16560 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 12-10-2018 IPR025526 DsrC-like domain superfamily K04M3_16560 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 9.7E-41 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE K04M3_16560 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 2 38 6.8E-12 T 12-10-2018 K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 Gene3D G3DSA:3.40.50.720 2 264 1.1E-58 T 12-10-2018 K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 Pfam PF00106 short chain dehydrogenase 3 187 3.1E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 SUPERFAMILY SSF51735 2 271 2.69E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08050 606fff0a302e9a1e3fa884584372c8a2 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 Gene3D G3DSA:1.10.150.210 115 177 4.7E-166 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 Gene3D G3DSA:3.40.50.1000 2 310 4.7E-166 T 12-10-2018 IPR023214 HAD superfamily K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 Gene3D G3DSA:3.30.70.2020 8 322 4.7E-166 T 12-10-2018 K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 SUPERFAMILY SSF56784 107 310 3.86E-49 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 1.7E-27 T 12-10-2018 K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 3.8E-84 T 12-10-2018 K04M3_25380 1ffb68f1879e5bed0b2523eeec4fafa0 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 3.3E-14 T 12-10-2018 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.563 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:2.40.30.10 338 393 1.2E-29 T 12-10-2018 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:3.40.50.300 1 203 9.9E-70 T 12-10-2018 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Gene3D G3DSA:2.40.30.10 206 334 2.8E-52 T 12-10-2018 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.2E-230 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.6E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.6E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_30600 05b94e10c0d13e0059d5f408ccbfe860 394 SUPERFAMILY SSF52540 6 219 8.3E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21050 0dd45fa69c14d3e92a2aa5c79fd6d78e 338 Pfam PF02618 YceG-like family 43 328 1.9E-83 T 12-10-2018 IPR003770 Endolytic murein transglycosylase K04M3_21050 0dd45fa69c14d3e92a2aa5c79fd6d78e 338 Gene3D G3DSA:3.30.160.60 302 338 7.6E-18 T 12-10-2018 K04M3_21050 0dd45fa69c14d3e92a2aa5c79fd6d78e 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.443 T 12-10-2018 IPR003770 Endolytic murein transglycosylase K04M3_21050 0dd45fa69c14d3e92a2aa5c79fd6d78e 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 336 1.9E-104 T 12-10-2018 IPR003770 Endolytic murein transglycosylase K04M3_21050 0dd45fa69c14d3e92a2aa5c79fd6d78e 338 Gene3D G3DSA:3.30.160.60 75 110 3.1E-7 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF53850 50 258 1.13E-21 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 74 267 1.6E-13 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 820 931 1.8E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:3.40.190.10 140 232 2.6E-33 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Pfam PF00512 His Kinase A (phospho-acceptor) domain 706 772 5.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF53850 290 515 6.62E-9 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF47226 1055 1170 8.83E-11 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:3.40.190.10 53 267 2.6E-33 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:3.40.190.10 290 511 1.6E-20 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF47384 690 773 4.12E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF52172 955 1074 5.98E-29 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:1.10.287.130 693 773 2.2E-20 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SMART SM00388 706 772 3.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:3.30.565.10 774 936 4.0E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SMART SM00062 53 271 0.0029 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF55874 762 931 1.57E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SMART SM00448 955 1072 5.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SUPERFAMILY SSF55785 559 656 3.61E-5 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 911 2.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 874 2.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 930 2.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:1.20.120.160 1091 1185 2.3E-8 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Pfam PF00072 Response regulator receiver domain 957 1070 2.8E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:3.40.190.10 384 474 1.6E-20 T 12-10-2018 K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 SMART SM00387 819 933 1.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_19050 279feb6b682f0d14670c0eee16dcff3d 1186 Gene3D G3DSA:3.40.50.2300 937 1085 3.4E-30 T 12-10-2018 K04M3_47670 8a62a3e5b897bd54060c55ec33162a18 228 Pfam PF13280 WYL domain 140 226 2.4E-18 T 12-10-2018 IPR026881 WYL domain K04M3_47670 8a62a3e5b897bd54060c55ec33162a18 228 Pfam PF08279 HTH domain 6 59 1.8E-18 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 K04M3_47670 8a62a3e5b897bd54060c55ec33162a18 228 Gene3D G3DSA:1.10.10.10 1 64 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_47670 8a62a3e5b897bd54060c55ec33162a18 228 SUPERFAMILY SSF46785 1 61 3.16E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_47160 f7d84769265bcfc084f833dde9cbba01 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 1.1E-24 T 12-10-2018 IPR011491 Flagellar hook protein FlgE K04M3_47160 f7d84769265bcfc084f833dde9cbba01 398 SUPERFAMILY SSF117143 73 359 1.57E-79 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like K04M3_47160 f7d84769265bcfc084f833dde9cbba01 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 1.8E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_47160 f7d84769265bcfc084f833dde9cbba01 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 7.5E-94 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_47160 f7d84769265bcfc084f833dde9cbba01 398 Gene3D G3DSA:2.60.98.20 144 280 7.0E-35 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily K04M3_47160 f7d84769265bcfc084f833dde9cbba01 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_32420 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 SMART SM00079 24 244 0.0075 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 K04M3_32420 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site K04M3_32420 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 1.1E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_32420 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 SMART SM00062 24 245 1.3E-75 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_32420 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 Gene3D G3DSA:3.40.190.10 95 204 6.1E-30 T 12-10-2018 K04M3_32420 d0c20ae5d03e1be11bf50dc95c0b6d8d 248 SUPERFAMILY SSF53850 1 246 3.48E-59 T 12-10-2018 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 SUPERFAMILY SSF56784 5 224 4.52E-60 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.2E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 194 1.4E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 Gene3D G3DSA:1.10.150.240 21 94 2.4E-64 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 82 193 7.8E-15 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 7.6E-61 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.657 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 3.9E-39 T 12-10-2018 K04M3_29400 92f2dc9ee3fc1b5cba629224e325f67b 228 Gene3D G3DSA:3.40.50.1000 9 216 2.4E-64 T 12-10-2018 IPR023214 HAD superfamily K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 Pfam PF13533 Biotin-lipoyl like 52 99 7.3E-16 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 SUPERFAMILY SSF111369 49 109 2.48E-11 T 12-10-2018 K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 SUPERFAMILY SSF111369 170 262 7.59E-9 T 12-10-2018 K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 Gene3D G3DSA:1.10.287.470 85 116 1.5E-13 T 12-10-2018 K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 Gene3D G3DSA:2.40.50.100 50 84 1.5E-13 T 12-10-2018 K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 Gene3D G3DSA:1.10.287.470 121 185 8.7E-6 T 12-10-2018 K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 Gene3D G3DSA:2.40.30.170 228 351 3.1E-25 T 12-10-2018 K04M3_18580 e94aa97016e699be556c6e0e36365d75 354 Pfam PF13437 HlyD family secretion protein 214 328 6.7E-11 T 12-10-2018 K04M3_41760 67aabb6ad8ed1b83239b3d3432d4b6ed 206 Pfam PF12339 DNA-J related protein 17 138 2.0E-41 T 12-10-2018 IPR021059 DnaJ-related protein, N-terminal K04M3_41760 67aabb6ad8ed1b83239b3d3432d4b6ed 206 SMART SM00271 153 206 3.3E-10 T 12-10-2018 IPR001623 DnaJ domain K04M3_41760 67aabb6ad8ed1b83239b3d3432d4b6ed 206 Pfam PF00226 DnaJ domain 159 205 1.6E-11 T 12-10-2018 IPR001623 DnaJ domain K04M3_41760 67aabb6ad8ed1b83239b3d3432d4b6ed 206 Gene3D G3DSA:1.10.287.110 146 206 2.6E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_41760 67aabb6ad8ed1b83239b3d3432d4b6ed 206 SUPERFAMILY SSF46565 103 206 2.22E-15 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 420 33.149 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 Gene3D G3DSA:3.40.50.1980 225 342 2.6E-109 T 12-10-2018 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 25 419 9.8E-142 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 Pfam PF00815 Histidinol dehydrogenase 14 420 6.6E-144 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 162 188 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 100 127 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 192 217 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 1.2E-60 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 PIRSF PIRSF000099 4 423 3.8E-124 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 221 254 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 SUPERFAMILY SSF53720 12 421 7.45E-72 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_33450 c4b1d2990be8c30847bdd5a9cd200566 430 Gene3D G3DSA:3.40.50.1980 22 223 2.6E-109 T 12-10-2018 K04M3_20590 e1f41e67b50dd2583e5bb0a932659912 423 SUPERFAMILY SSF56954 6 412 5.62E-77 T 12-10-2018 K04M3_20590 e1f41e67b50dd2583e5bb0a932659912 423 Gene3D G3DSA:1.20.1600.10 26 423 1.4E-78 T 12-10-2018 K04M3_20590 e1f41e67b50dd2583e5bb0a932659912 423 Pfam PF02321 Outer membrane efflux protein 229 407 3.1E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_20590 e1f41e67b50dd2583e5bb0a932659912 423 Pfam PF02321 Outer membrane efflux protein 28 204 1.3E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_02230 e86aee15b9030a79d02cc79a39d171e4 292 Gene3D G3DSA:3.90.550.10 1 277 5.6E-81 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_02230 e86aee15b9030a79d02cc79a39d171e4 292 SUPERFAMILY SSF53448 2 271 1.11E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_02230 e86aee15b9030a79d02cc79a39d171e4 292 Pfam PF00483 Nucleotidyl transferase 9 265 1.8E-31 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 K04M3_02230 e86aee15b9030a79d02cc79a39d171e4 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.7E-123 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 K04M3_09650 1155ac86df8ad1c95f6a03f210eaae20 182 Gene3D G3DSA:3.40.630.30 1 178 2.6E-45 T 12-10-2018 K04M3_09650 1155ac86df8ad1c95f6a03f210eaae20 182 SUPERFAMILY SSF55729 3 177 2.16E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_09650 1155ac86df8ad1c95f6a03f210eaae20 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 5.6E-22 T 12-10-2018 IPR000182 GNAT domain K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 431 523 2.4E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:3.20.20.80 524 844 1.4E-77 T 12-10-2018 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.10.10.20 10 79 3.3E-11 T 12-10-2018 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 SUPERFAMILY SSF51055 16 78 3.66E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 SUPERFAMILY SSF51445 524 835 1.11E-47 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 SMART SM00636 525 827 3.7E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 SMART SM00495 28 74 5.0E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 SMART SM00495 279 328 2.7E-4 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 4.5E-24 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 179 272 9.3E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 85 175 1.6E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_24250 2f62b081dc5a1e09c5b86a8f073f8625 848 Gene3D G3DSA:2.60.40.10 337 429 8.4E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 Gene3D G3DSA:3.30.360.10 180 488 6.3E-125 T 12-10-2018 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 SUPERFAMILY SSF51735 4 194 1.26E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 6.7E-64 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 SUPERFAMILY SSF55347 181 489 2.78E-113 T 12-10-2018 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 4.8E-203 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.284 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 3.9E-115 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 Gene3D G3DSA:3.40.50.720 4 179 9.5E-60 T 12-10-2018 K04M3_17660 64403fbc3d959fe7f83b1c87a74c35e3 500 PIRSF PIRSF000110 3 489 3.4E-177 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 K04M3_04270 28d5ea4d7c66979f9277801401852bda 360 Pfam PF00953 Glycosyl transferase family 4 99 283 4.0E-37 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 K04M3_04270 28d5ea4d7c66979f9277801401852bda 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04270 28d5ea4d7c66979f9277801401852bda 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04270 28d5ea4d7c66979f9277801401852bda 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.1E-157 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04270 28d5ea4d7c66979f9277801401852bda 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04270 28d5ea4d7c66979f9277801401852bda 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.421 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_46850 16dc93ac48043e66b8bdb037c68d789f 118 Gene3D G3DSA:3.10.180.10 6 117 2.2E-17 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_46850 16dc93ac48043e66b8bdb037c68d789f 118 SUPERFAMILY SSF54593 6 116 4.95E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_46850 16dc93ac48043e66b8bdb037c68d789f 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 112 1.9E-5 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SUPERFAMILY SSF52172 527 650 6.69E-26 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SMART SM00091 155 221 8.3E-8 T 12-10-2018 IPR000014 PAS domain K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SUPERFAMILY SSF47226 668 782 4.32E-29 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Gene3D G3DSA:3.40.50.2300 523 647 3.8E-27 T 12-10-2018 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Pfam PF01627 Hpt domain 695 766 9.3E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Pfam PF08448 PAS fold 162 271 2.2E-18 T 12-10-2018 IPR013656 PAS fold-4 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Gene3D G3DSA:1.20.120.160 668 784 4.6E-28 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SMART SM00073 683 780 2.9E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Gene3D G3DSA:1.10.287.970 1 89 4.2E-38 T 12-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Gene3D G3DSA:1.10.287.130 268 345 1.7E-21 T 12-10-2018 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Pfam PF00072 Response regulator receiver domain 529 638 2.9E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SUPERFAMILY SSF55874 336 506 2.23E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 3.4E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 3.5E-18 T 12-10-2018 IPR000014 PAS domain K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Gene3D G3DSA:3.30.565.10 348 512 1.5E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 Gene3D G3DSA:3.30.450.20 151 267 8.4E-23 T 12-10-2018 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 PIRSF PIRSF003182 1 784 0.0 T 12-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SMART SM00448 527 638 1.4E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SUPERFAMILY SSF55785 140 267 1.12E-25 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SUPERFAMILY SSF47384 270 347 2.16E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SMART SM00387 394 510 3.1E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_04570 7f2aab8951471e6ec537209034a4911f 784 SMART SM00388 282 347 9.8E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 Gene3D G3DSA:1.10.8.420 1 53 3.5E-19 T 12-10-2018 K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 SUPERFAMILY SSF111304 2 199 3.14E-72 T 12-10-2018 IPR023627 Recombination protein RecR K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 Pfam PF13662 Toprim domain 82 172 4.3E-23 T 12-10-2018 IPR006171 TOPRIM domain K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 SMART SM00493 81 166 4.5E-17 T 12-10-2018 IPR006171 TOPRIM domain K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 Pfam PF02132 RecR protein 41 77 2.1E-15 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 Gene3D G3DSA:3.40.1360.10 78 199 8.2E-39 T 12-10-2018 K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.2E-78 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 K04M3_22160 7cbf62d148a5c64f83737a380ff105b0 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.198 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 K04M3_51570 a286066331e51d667b79b132d85ce32b 250 SMART SM00892 40 238 1.6E-20 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 K04M3_51570 a286066331e51d667b79b132d85ce32b 250 Pfam PF01223 DNA/RNA non-specific endonuclease 37 227 1.6E-31 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 K04M3_51570 a286066331e51d667b79b132d85ce32b 250 Gene3D G3DSA:3.40.570.10 20 242 3.0E-32 T 12-10-2018 K04M3_51570 a286066331e51d667b79b132d85ce32b 250 SUPERFAMILY SSF54060 29 229 1.71E-33 T 12-10-2018 K04M3_51570 a286066331e51d667b79b132d85ce32b 250 SMART SM00477 41 234 3.3E-5 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 K04M3_32020 42a898da778552b6c85f6ca91318984d 268 Pfam PF07070 SpoOM protein 4 219 1.2E-76 T 12-10-2018 IPR009776 Sporulation stage 0, protein M K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 Pfam PF00072 Response regulator receiver domain 12 121 1.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 SUPERFAMILY SSF46894 142 240 1.42E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 Gene3D G3DSA:1.10.10.10 131 243 1.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 SMART SM00448 10 121 1.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 SUPERFAMILY SSF52172 11 140 5.83E-38 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 SMART SM00862 163 239 5.2E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_34770 7714d2acdf356e601f2ec8faf1c1f5e1 243 Gene3D G3DSA:3.40.50.2300 2 130 1.7E-36 T 12-10-2018 K04M3_40110 616e4efa9139eefc11ad905f2d433160 722 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 153 1.1E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_40110 616e4efa9139eefc11ad905f2d433160 722 Gene3D G3DSA:2.170.130.10 43 162 3.3E-22 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_40110 616e4efa9139eefc11ad905f2d433160 722 SUPERFAMILY SSF56935 37 721 1.17E-89 T 12-10-2018 K04M3_40110 616e4efa9139eefc11ad905f2d433160 722 Pfam PF00593 TonB dependent receptor 245 720 2.6E-28 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_40110 616e4efa9139eefc11ad905f2d433160 722 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 721 2.7E-82 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_40110 616e4efa9139eefc11ad905f2d433160 722 Gene3D G3DSA:2.40.170.20 173 722 1.9E-47 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 315 328 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 Gene3D G3DSA:3.90.1150.10 35 527 4.2E-200 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 Pfam PF00155 Aminotransferase class I and II 179 512 2.3E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 Gene3D G3DSA:1.10.20.110 42 407 4.2E-200 T 12-10-2018 K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 SUPERFAMILY SSF53383 143 517 1.57E-44 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 Gene3D G3DSA:3.40.640.10 166 385 4.2E-200 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_17800 c288b183596eb63eeaf808aa54ab4e2a 531 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 16 529 3.0E-220 T 12-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_14760 fd12202aa47d18e02e4dde5d25778ffc 332 Gene3D G3DSA:3.40.50.1000 110 307 1.1E-43 T 12-10-2018 IPR023214 HAD superfamily K04M3_14760 fd12202aa47d18e02e4dde5d25778ffc 332 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 268 4.1E-24 T 12-10-2018 K04M3_14760 fd12202aa47d18e02e4dde5d25778ffc 332 SUPERFAMILY SSF56784 62 308 5.43E-25 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 SMART SM00052 417 663 1.2E-58 T 12-10-2018 IPR001633 EAL domain K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 Gene3D G3DSA:3.10.580.10 684 817 1.8E-10 T 12-10-2018 K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 SUPERFAMILY SSF54631 693 816 5.0E-11 T 12-10-2018 K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 3.0E-9 T 12-10-2018 IPR000014 PAS domain K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 SUPERFAMILY SSF55785 126 239 1.06E-14 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 Pfam PF00989 PAS fold 132 235 1.3E-9 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 SUPERFAMILY SSF141868 425 662 5.1E-64 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 Gene3D G3DSA:3.30.450.20 121 239 8.6E-14 T 12-10-2018 K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 SMART SM00091 128 194 9.0E-6 T 12-10-2018 IPR000014 PAS domain K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 Pfam PF00563 EAL domain 426 657 8.0E-62 T 12-10-2018 IPR001633 EAL domain K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 Gene3D G3DSA:3.20.20.450 416 669 3.3E-70 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_20380 10da65a4cbea36543d9841b47bbe441c 818 Pfam PF00571 CBS domain 761 816 3.5E-5 T 12-10-2018 IPR000644 CBS domain K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Pfam PF02743 Cache domain 47 297 6.1E-25 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 574 1.1E-27 T 12-10-2018 IPR000160 GGDEF domain K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Gene3D G3DSA:3.30.70.270 428 594 6.1E-36 T 12-10-2018 K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 SMART SM00052 592 839 1.2E-99 T 12-10-2018 IPR001633 EAL domain K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 SUPERFAMILY SSF55073 432 584 1.49E-32 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Gene3D G3DSA:3.30.450.20 126 219 4.9E-14 T 12-10-2018 K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 1.5E-31 T 12-10-2018 IPR000160 GGDEF domain K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 SUPERFAMILY SSF158472 369 418 7.19E-7 T 12-10-2018 K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Pfam PF00563 EAL domain 599 834 1.2E-68 T 12-10-2018 IPR001633 EAL domain K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 SMART SM00267 416 582 1.0E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 SUPERFAMILY SSF141868 599 846 1.57E-81 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Gene3D G3DSA:1.20.1480.50 330 427 4.3E-8 T 12-10-2018 K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 SMART SM00304 368 421 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_01030 d7fd14c2c4d82195265a1d95b7744035 848 Gene3D G3DSA:3.20.20.450 595 847 1.6E-86 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_00930 b825b9edc1e89162e1cb62f5bcaa3612 144 Gene3D G3DSA:3.40.630.30 2 143 3.1E-17 T 12-10-2018 K04M3_00930 b825b9edc1e89162e1cb62f5bcaa3612 144 Pfam PF00583 Acetyltransferase (GNAT) family 32 117 2.7E-8 T 12-10-2018 IPR000182 GNAT domain K04M3_00930 b825b9edc1e89162e1cb62f5bcaa3612 144 SUPERFAMILY SSF55729 1 130 3.6E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 444 1.8E-189 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 445 7.2E-165 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 Gene3D G3DSA:3.40.50.12240 22 448 4.0E-150 T 12-10-2018 K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 SMART SM00382 166 349 0.0014 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 3.6E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_34630 3ee95af28d02ca9e0052cdd6f9686a99 448 SUPERFAMILY SSF52540 102 370 2.57E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 SMART SM00382 42 195 3.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 SUPERFAMILY SSF47090 452 526 4.19E-12 T 12-10-2018 IPR036365 PGBD-like superfamily K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 Pfam PF13401 AAA domain 42 171 2.5E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 Gene3D G3DSA:3.90.70.10 339 456 1.7E-32 T 12-10-2018 K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 Gene3D G3DSA:3.40.50.300 25 184 2.8E-13 T 12-10-2018 K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 Pfam PF01471 Putative peptidoglycan binding domain 464 519 9.9E-7 T 12-10-2018 IPR002477 Peptidoglycan binding-like K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 Gene3D G3DSA:1.10.101.10 457 524 2.2E-20 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 K04M3_03860 6a89626f804d122a102cd3d3d92db7a0 538 SUPERFAMILY SSF52540 6 264 3.37E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31570 53a465a78932606100535d6ccb106d1b 588 SUPERFAMILY SSF56235 45 587 1.5E-175 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_31570 53a465a78932606100535d6ccb106d1b 588 Gene3D G3DSA:3.60.20.40 410 588 4.5E-59 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 2.5E-65 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 9.8E-163 T 12-10-2018 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 1.0E-138 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 K04M3_31570 53a465a78932606100535d6ccb106d1b 588 Gene3D G3DSA:1.10.246.130 286 409 6.3E-40 T 12-10-2018 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.964 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 SMART SM00861 319 483 1.7E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 SUPERFAMILY SSF52518 317 504 5.09E-58 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.5E-119 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 4.0E-37 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 SUPERFAMILY SSF52922 492 619 2.22E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 3.5E-28 T 12-10-2018 IPR033248 Transketolase, C-terminal domain K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 Gene3D G3DSA:3.40.50.970 317 490 4.6E-65 T 12-10-2018 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 2.8E-303 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 Gene3D G3DSA:3.40.50.920 495 621 1.0E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_06640 c2bd1399b6f9f73fec32c78a48610d04 621 SUPERFAMILY SSF52518 9 381 2.7E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_27750 dd2955687adbcf481f22f1fa266f0df2 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 2.8E-118 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 K04M3_27750 dd2955687adbcf481f22f1fa266f0df2 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 7.7E-70 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 K04M3_41870 03c2ce28fe6b765478e6e756bf86279f 802 Gene3D G3DSA:3.40.50.1820 428 608 2.0E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_41870 03c2ce28fe6b765478e6e756bf86279f 802 SUPERFAMILY SSF53474 441 596 7.89E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_41870 03c2ce28fe6b765478e6e756bf86279f 802 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 789 8.1E-259 T 12-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family K04M3_41870 03c2ce28fe6b765478e6e756bf86279f 802 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 3.7E-131 T 12-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain K04M3_12540 fae1e19d0d6061c8213194859a172800 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 293 5.8E-99 T 12-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 Gene3D G3DSA:3.40.140.10 180 295 1.2E-26 T 12-10-2018 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.756 T 12-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.9E-41 T 12-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 PIRSF PIRSF006334 14 295 2.4E-108 T 12-10-2018 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 Gene3D G3DSA:3.40.140.10 29 179 5.4E-44 T 12-10-2018 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 SUPERFAMILY SSF53927 1 147 1.39E-40 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_12540 fae1e19d0d6061c8213194859a172800 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 1.3E-11 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain K04M3_12540 fae1e19d0d6061c8213194859a172800 295 SUPERFAMILY SSF53927 152 284 1.1E-36 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_10410 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 12-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 K04M3_10410 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 12-10-2018 IPR012994 Membrane bound YbgT-like K04M3_41790 74ca769eb2a4cd1e65b9e4f52f2762cb 110 SUPERFAMILY SSF54913 3 106 1.04E-33 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta K04M3_41790 74ca769eb2a4cd1e65b9e4f52f2762cb 110 Gene3D G3DSA:3.30.70.120 1 108 3.1E-35 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal K04M3_41790 74ca769eb2a4cd1e65b9e4f52f2762cb 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 9.6E-33 T 12-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 SUPERFAMILY SSF56024 70 313 3.14E-51 T 12-10-2018 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 Pfam PF13091 PLD-like domain 327 444 1.6E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 Pfam PF13091 PLD-like domain 134 268 1.5E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 7.6E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal K04M3_11550 7791e14e93daa5291a0f992b58825490 484 SMART SM00155 219 246 4.0E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 SMART SM00155 397 424 9.5E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 SUPERFAMILY SSF56024 273 469 2.11E-48 T 12-10-2018 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 Gene3D G3DSA:3.30.870.10 315 458 1.9E-24 T 12-10-2018 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 Gene3D G3DSA:3.30.870.10 116 307 1.3E-37 T 12-10-2018 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 5.4E-157 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 50.08 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 PIRSF PIRSF000850 297 377 0.021 T 12-10-2018 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 PIRSF PIRSF000850 102 253 0.6 T 12-10-2018 K04M3_11550 7791e14e93daa5291a0f992b58825490 484 PIRSF PIRSF000850 385 482 0.016 T 12-10-2018 K04M3_32570 715444c761173e96bd2c3ddc5362866b 197 Pfam PF00924 Mechanosensitive ion channel 72 174 2.2E-11 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 K04M3_32570 715444c761173e96bd2c3ddc5362866b 197 SUPERFAMILY SSF50182 109 175 1.05E-11 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_32570 715444c761173e96bd2c3ddc5362866b 197 Gene3D G3DSA:2.30.30.60 124 176 1.3E-6 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily K04M3_07690 5db888065ee24994f11bb631420dc5a4 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 3.0E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 K04M3_07690 5db888065ee24994f11bb631420dc5a4 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_07690 5db888065ee24994f11bb631420dc5a4 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 2.1E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_07690 5db888065ee24994f11bb631420dc5a4 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.756 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 SUPERFAMILY SSF54211 1 181 4.96E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 3.0E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 7.5E-111 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 SUPERFAMILY SSF55666 153 236 5.5E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.9E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 Gene3D G3DSA:3.30.230.70 13 238 4.2E-63 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_01620 d2ad8c5a066db8e30d856c30a1c8df15 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site K04M3_03510 a30b45d0bc6b9b517859e9e9c9565585 182 Gene3D G3DSA:1.20.144.10 96 181 1.4E-17 T 12-10-2018 K04M3_03510 a30b45d0bc6b9b517859e9e9c9565585 182 SMART SM00014 71 177 2.8E-11 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase K04M3_03510 a30b45d0bc6b9b517859e9e9c9565585 182 Pfam PF01569 PAP2 superfamily 67 179 3.2E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase K04M3_03510 a30b45d0bc6b9b517859e9e9c9565585 182 SUPERFAMILY SSF48317 12 179 7.98E-37 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 12-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 1.5E-12 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 6.0E-62 T 12-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SUPERFAMILY SSF51445 407 975 7.18E-126 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SUPERFAMILY SSF49452 18 171 8.5E-29 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:2.60.40.1110 34 170 1.6E-29 T 12-10-2018 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:2.60.40.10 1224 1326 4.1E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:2.60.40.1130 180 296 6.1E-31 T 12-10-2018 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SUPERFAMILY SSF81296 171 296 1.68E-30 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SUPERFAMILY SSF51011 978 1092 2.16E-39 T 12-10-2018 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SMART SM00642 552 915 0.001 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:2.60.40.10 1092 1161 1.8E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:3.20.20.80 410 1009 2.3E-216 T 12-10-2018 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Pfam PF03714 Bacterial pullanase-associated domain 51 171 3.8E-17 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:2.60.40.10 303 409 4.1E-30 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 Gene3D G3DSA:2.60.40.1180 1010 1091 2.5E-28 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SUPERFAMILY SSF81296 309 412 2.8E-20 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_33600 9f96a4a94d651a71f181b7af39ff1b87 1329 SUPERFAMILY SSF81296 1103 1153 1.46E-5 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_08510 d2191acae7d4d26aad573820699584d9 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 2.5E-18 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 Pfam PF02421 Ferrous iron transport protein B 4 161 1.7E-58 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 SUPERFAMILY SSF52540 4 183 7.17E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08510 d2191acae7d4d26aad573820699584d9 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 Gene3D G3DSA:3.40.50.300 3 200 1.1E-43 T 12-10-2018 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 Pfam PF07670 Nucleoside recognition 509 691 1.4E-36 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 2.3E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_08510 d2191acae7d4d26aad573820699584d9 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 4.3E-181 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 SMART SM01049 44 133 2.0E-31 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 SMART SM00283 295 556 2.6E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 Gene3D G3DSA:3.30.450.20 38 183 1.6E-54 T 12-10-2018 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 SMART SM00304 226 280 7.1E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 Pfam PF00672 HAMP domain 229 276 1.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 Gene3D G3DSA:1.10.287.950 226 557 1.2E-68 T 12-10-2018 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 Pfam PF17200 Single Cache domain 2 47 189 2.6E-37 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 SUPERFAMILY SSF58104 248 557 5.23E-72 T 12-10-2018 K04M3_01670 b30294b02edc7b2e7844a61e79649d52 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 523 1.3E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.387 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 SUPERFAMILY SSF51395 1 313 2.2E-73 T 12-10-2018 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 299 3.9E-78 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 PIRSF PIRSF006621 1 318 1.8E-74 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 Gene3D G3DSA:1.20.225.30 243 313 1.9E-26 T 12-10-2018 K04M3_21320 f0727c37b507ce587c0c5b65c1e8489b 319 Gene3D G3DSA:3.20.20.70 1 242 9.7E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 9.1E-118 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 SUPERFAMILY SSF117143 93 222 4.18E-36 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.0E-45 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 2.2E-32 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_47140 f4d3e21f59f9e06a7d4e168d33bbdb60 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 1.5E-26 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_17200 d2bf072dd1a13ee134dbca77a8e391db 94 Pfam PF07216 LcrG protein 1 94 2.6E-35 T 12-10-2018 IPR009863 Type III secretion protein, LcrG K04M3_17200 d2bf072dd1a13ee134dbca77a8e391db 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 8.3E-36 T 12-10-2018 IPR009863 Type III secretion protein, LcrG K04M3_17200 d2bf072dd1a13ee134dbca77a8e391db 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 2.0E-27 T 12-10-2018 IPR009863 Type III secretion protein, LcrG K04M3_27710 ac3b1d19aedb7aab32c67468e9c8cd84 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 18 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_27710 ac3b1d19aedb7aab32c67468e9c8cd84 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_27710 ac3b1d19aedb7aab32c67468e9c8cd84 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_27710 ac3b1d19aedb7aab32c67468e9c8cd84 221 Gene3D G3DSA:3.40.50.720 1 221 6.7E-52 T 12-10-2018 K04M3_27710 ac3b1d19aedb7aab32c67468e9c8cd84 221 Pfam PF00106 short chain dehydrogenase 2 183 4.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_27710 ac3b1d19aedb7aab32c67468e9c8cd84 221 SUPERFAMILY SSF51735 2 207 2.28E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_20740 21aa2ff9c52fb98e977475754a4baef0 350 Gene3D G3DSA:1.10.760.10 208 325 8.8E-37 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20740 21aa2ff9c52fb98e977475754a4baef0 350 Gene3D G3DSA:1.10.760.10 36 162 3.7E-36 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20740 21aa2ff9c52fb98e977475754a4baef0 350 SUPERFAMILY SSF46626 209 313 1.89E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20740 21aa2ff9c52fb98e977475754a4baef0 350 SUPERFAMILY SSF46626 54 163 1.08E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20740 21aa2ff9c52fb98e977475754a4baef0 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 5.9E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 SUPERFAMILY SSF53383 6 415 4.26E-185 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 2.6E-183 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 Gene3D G3DSA:3.40.640.10 37 288 1.7E-187 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 PIRSF PIRSF000412 1 416 4.3E-170 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.634 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 Gene3D G3DSA:3.90.1150.10 10 396 1.7E-187 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_06910 12e48c9875cad93ce87325e7b97397ba 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 Gene3D G3DSA:1.10.287.1040 4 80 1.6E-22 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 PIRSF PIRSF006488 1 80 9.0E-21 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 K04M3_06660 404066f0bb7e974bf8325b596a26efac 80 SUPERFAMILY SSF116842 2 72 9.29E-21 T 12-10-2018 K04M3_05260 609282a5834c2826b9e91f549640766d 325 Pfam PF01479 S4 domain 18 65 4.5E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_05260 609282a5834c2826b9e91f549640766d 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_05260 609282a5834c2826b9e91f549640766d 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 9.2E-105 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_05260 609282a5834c2826b9e91f549640766d 325 SMART SM00363 18 83 1.2E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_05260 609282a5834c2826b9e91f549640766d 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.9E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_05260 609282a5834c2826b9e91f549640766d 325 SUPERFAMILY SSF55120 77 316 1.91E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_05260 609282a5834c2826b9e91f549640766d 325 SUPERFAMILY SSF55174 17 68 7.06E-11 T 12-10-2018 K04M3_05260 609282a5834c2826b9e91f549640766d 325 Gene3D G3DSA:3.30.2350.10 85 316 9.2E-72 T 12-10-2018 K04M3_05260 609282a5834c2826b9e91f549640766d 325 Gene3D G3DSA:3.10.290.10 2 76 9.0E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Pfam PF00158 Sigma-54 interaction domain 144 310 3.7E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 SUPERFAMILY SSF52540 144 373 7.56E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Pfam PF00072 Response regulator receiver domain 4 114 1.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 SUPERFAMILY SSF46689 391 440 9.32E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Gene3D G3DSA:1.10.8.60 315 379 3.3E-21 T 12-10-2018 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 SUPERFAMILY SSF52172 2 188 2.28E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Gene3D G3DSA:3.40.50.2300 1 130 2.1E-34 T 12-10-2018 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 2.6E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 SMART SM00382 164 307 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Gene3D G3DSA:1.10.10.60 386 442 8.8E-13 T 12-10-2018 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 SMART SM00448 2 114 7.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_09090 b67ae4c149f1c04b1bca249f47140001 445 Gene3D G3DSA:3.40.50.300 131 314 2.9E-61 T 12-10-2018 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 SMART SM00859 2 121 3.1E-23 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 SUPERFAMILY SSF55347 133 354 8.26E-79 T 12-10-2018 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 PIRSF PIRSF000148 1 371 1.1E-65 T 12-10-2018 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.876 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 5.8E-190 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.7E-22 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 Gene3D G3DSA:3.40.50.720 3 356 1.6E-146 T 12-10-2018 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 SUPERFAMILY SSF51735 1 146 4.93E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.5E-58 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_21810 30bf74e56b04d7ac9f7fd76eba07143c 371 Gene3D G3DSA:3.30.360.10 134 350 1.6E-146 T 12-10-2018 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 PIRSF PIRSF001553 1 289 3.0E-135 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site K04M3_08450 a858394863a4070255c48dd37c36f51f 290 SMART SM00881 4 100 6.0E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 SUPERFAMILY SSF52210 123 285 1.31E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08450 a858394863a4070255c48dd37c36f51f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 3.1E-146 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 Pfam PF00549 CoA-ligase 151 271 3.4E-22 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.0E-40 T 12-10-2018 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.0E-40 T 12-10-2018 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.0E-40 T 12-10-2018 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.0E-40 T 12-10-2018 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 12-10-2018 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.491 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 Gene3D G3DSA:3.40.50.261 124 288 6.0E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 K04M3_08450 a858394863a4070255c48dd37c36f51f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site K04M3_26040 7da085df9d60aaf8a3eeb16986d2fb4b 776 SUPERFAMILY SSF52151 43 331 9.94E-58 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_26040 7da085df9d60aaf8a3eeb16986d2fb4b 776 Pfam PF01734 Patatin-like phospholipase 49 239 1.1E-26 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 K04M3_26040 7da085df9d60aaf8a3eeb16986d2fb4b 776 Pfam PF07244 Surface antigen variable number repeat 359 429 1.0E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 K04M3_26040 7da085df9d60aaf8a3eeb16986d2fb4b 776 Gene3D G3DSA:3.10.20.310 355 429 1.1E-7 T 12-10-2018 K04M3_26040 7da085df9d60aaf8a3eeb16986d2fb4b 776 Gene3D G3DSA:3.40.1090.10 27 138 1.2E-27 T 12-10-2018 K04M3_26040 7da085df9d60aaf8a3eeb16986d2fb4b 776 Gene3D G3DSA:3.40.1090.10 153 294 1.4E-17 T 12-10-2018 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 Pfam PF02378 Phosphotransferase system, EIIC 247 510 3.3E-17 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 Gene3D G3DSA:3.40.50.2300 1 103 1.1E-24 T 12-10-2018 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.3E-36 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 211 3.7E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 4.1E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 SUPERFAMILY SSF52794 2 102 1.15E-28 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 Gene3D G3DSA:3.40.50.2300 113 222 6.2E-41 T 12-10-2018 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 SUPERFAMILY SSF52794 121 222 2.27E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 K04M3_42270 0f24791b02394b8e9b3c20b9b9ee8d97 577 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 229 566 4.9E-143 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 K04M3_32720 a3063cb1c5abea2cbe7960cf547d30d4 79 SUPERFAMILY SSF54928 2 78 1.24E-23 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 K04M3_32720 a3063cb1c5abea2cbe7960cf547d30d4 79 Gene3D G3DSA:3.30.70.330 1 79 1.8E-23 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily K04M3_32720 a3063cb1c5abea2cbe7960cf547d30d4 79 SMART SM00360 2 75 1.6E-21 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 K04M3_32720 a3063cb1c5abea2cbe7960cf547d30d4 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 8.0E-19 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.0E-40 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 PIRSF PIRSF001589 1 368 4.9E-105 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 PIRSF PIRSF001589 363 506 1.8E-27 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 Gene3D G3DSA:3.40.50.620 194 514 3.0E-112 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 SUPERFAMILY SSF56235 1 196 3.26E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 Gene3D G3DSA:3.60.20.10 2 193 3.9E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 Pfam PF00733 Asparagine synthase 211 366 6.0E-56 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 SUPERFAMILY SSF52402 208 482 2.35E-74 T 12-10-2018 K04M3_08220 5bad3e6747a75615747cc1a81fb55c6e 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 5.6E-116 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 Pfam PF11412 Disulphide bond corrector protein DsbC 41 150 1.4E-28 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 SUPERFAMILY SSF74863 39 152 2.35E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 Gene3D G3DSA:3.40.30.10 484 610 3.5E-34 T 12-10-2018 K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 Gene3D G3DSA:2.60.40.1250 35 169 2.8E-39 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 219 419 9.0E-18 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 ProSitePatterns PS00194 Thioredoxin family active site. 519 537 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 610 38.827 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 SUPERFAMILY SSF52833 505 608 2.22E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_30070 991fe0d28a7ef500e73d42addff01f26 610 Pfam PF13899 Thioredoxin-like 500 581 1.3E-13 T 12-10-2018 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 3.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.437 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 Gene3D G3DSA:3.20.20.10 71 355 5.2E-235 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 Gene3D G3DSA:2.40.37.10 18 575 5.2E-235 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 PIRSF PIRSF001336 2 640 1.6E-251 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 SUPERFAMILY SSF51419 70 352 1.96E-63 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 Gene3D G3DSA:1.20.58.930 372 467 5.2E-235 T 12-10-2018 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 350 5.3E-49 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 K04M3_48120 708f29f053ef38a70aa3ca38d1237203 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 5.0E-267 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 K04M3_30890 99be647cf90aad10028e6eeb7d1a9857 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site K04M3_30890 99be647cf90aad10028e6eeb7d1a9857 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_30890 99be647cf90aad10028e6eeb7d1a9857 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_30890 99be647cf90aad10028e6eeb7d1a9857 213 Gene3D G3DSA:1.10.357.10 56 210 1.4E-36 T 12-10-2018 K04M3_30890 99be647cf90aad10028e6eeb7d1a9857 213 Gene3D G3DSA:1.10.10.60 4 55 1.4E-23 T 12-10-2018 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 166 605 2.2E-112 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 Gene3D G3DSA:3.30.379.10 14 162 8.8E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 Gene3D G3DSA:3.20.20.80 544 635 4.4E-15 T 12-10-2018 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 SUPERFAMILY SSF55545 31 165 9.68E-30 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 SUPERFAMILY SSF51445 166 618 6.16E-101 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 4.2E-15 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 Gene3D G3DSA:3.20.20.80 164 448 2.8E-88 T 12-10-2018 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 309 9.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 189 210 9.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 160 177 9.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 241 258 9.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 326 9.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_36800 4711717a21a02cc3c0aafc2583965892 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 125 145 9.9E-41 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 PIRSF PIRSF001413 1 396 4.9E-168 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.952 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 3.0E-194 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 SUPERFAMILY SSF53686 5 387 3.4E-141 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 Gene3D G3DSA:3.40.50.1100 53 383 2.3E-183 T 12-10-2018 K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 Gene3D G3DSA:3.40.50.1100 9 204 2.3E-183 T 12-10-2018 K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.3E-48 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_20220 f605f2cf2511f2f79766c488f57ecfaa 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_36110 39f4ea38295690e79881ce628e51c175 153 Gene3D G3DSA:1.10.287.790 61 110 4.7E-29 T 12-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily K04M3_36110 39f4ea38295690e79881ce628e51c175 153 Gene3D G3DSA:1.20.5.830 111 153 7.3E-28 T 12-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily K04M3_36110 39f4ea38295690e79881ce628e51c175 153 SUPERFAMILY SSF46689 1 74 7.7E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_36110 39f4ea38295690e79881ce628e51c175 153 Gene3D G3DSA:1.10.10.60 2 60 6.8E-8 T 12-10-2018 K04M3_16470 f64293a72c598179f5ca0cd49b4c1772 160 SUPERFAMILY SSF89963 88 160 8.37E-29 T 12-10-2018 IPR036183 YajQ-like superfamily K04M3_16470 f64293a72c598179f5ca0cd49b4c1772 160 Gene3D G3DSA:3.30.70.990 9 94 1.3E-26 T 12-10-2018 IPR035570 UPF0234, N-terminal K04M3_16470 f64293a72c598179f5ca0cd49b4c1772 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.515 T 12-10-2018 IPR007551 Protein of unknown function DUF520 K04M3_16470 f64293a72c598179f5ca0cd49b4c1772 160 SUPERFAMILY SSF89963 2 84 6.8E-31 T 12-10-2018 IPR036183 YajQ-like superfamily K04M3_16470 f64293a72c598179f5ca0cd49b4c1772 160 Gene3D G3DSA:3.30.70.860 95 160 5.8E-31 T 12-10-2018 IPR035571 UPF0234-like, C-terminal K04M3_16470 f64293a72c598179f5ca0cd49b4c1772 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.1E-64 T 12-10-2018 IPR007551 Protein of unknown function DUF520 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 Gene3D G3DSA:4.10.1250.10 233 281 4.6E-20 T 12-10-2018 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 SUPERFAMILY SSF101790 279 371 1.16E-25 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 3.7E-87 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 PIRSF PIRSF006487 1 372 1.3E-79 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 4.9E-22 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 Gene3D G3DSA:2.40.30.110 284 361 1.1E-27 T 12-10-2018 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 9.4E-106 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 Gene3D G3DSA:3.30.70.1400 56 139 9.7E-84 T 12-10-2018 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 SUPERFAMILY SSF103025 4 281 2.35E-89 T 12-10-2018 K04M3_42330 bffe94818873cfb5f26c0fcacfece525 372 Gene3D G3DSA:3.30.1360.120 7 231 9.7E-84 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Pfam PF05193 Peptidase M16 inactive domain 201 374 2.5E-13 T 12-10-2018 IPR007863 Peptidase M16, C-terminal K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Pfam PF05193 Peptidase M16 inactive domain 669 847 1.2E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Gene3D G3DSA:3.30.830.10 732 916 3.7E-13 T 12-10-2018 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Pfam PF00675 Insulinase (Peptidase family M16) 47 166 9.1E-26 T 12-10-2018 IPR011765 Peptidase M16, N-terminal K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Gene3D G3DSA:3.30.830.10 260 468 3.0E-10 T 12-10-2018 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Gene3D G3DSA:3.30.830.10 6 247 9.6E-62 T 12-10-2018 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 SUPERFAMILY SSF63411 495 716 6.63E-27 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 SUPERFAMILY SSF63411 734 911 1.22E-14 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 SUPERFAMILY SSF63411 25 239 3.14E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_33290 1c9df81dc7f3bd12e742d2c8ee8fa522 916 Gene3D G3DSA:3.30.830.10 506 716 3.1E-16 T 12-10-2018 K04M3_06760 b2980d75d5a3addef214ceb713d1080d 521 SMART SM00267 351 521 9.4E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_06760 b2980d75d5a3addef214ceb713d1080d 521 SUPERFAMILY SSF55073 366 518 8.63E-35 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_06760 b2980d75d5a3addef214ceb713d1080d 521 Gene3D G3DSA:3.30.70.270 356 520 8.5E-41 T 12-10-2018 K04M3_06760 b2980d75d5a3addef214ceb713d1080d 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 1.3E-35 T 12-10-2018 IPR000160 GGDEF domain K04M3_06760 b2980d75d5a3addef214ceb713d1080d 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 9.3E-35 T 12-10-2018 IPR000160 GGDEF domain K04M3_30580 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site K04M3_30580 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_30580 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 12-10-2018 IPR005824 KOW K04M3_30580 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_30580 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 12-10-2018 IPR005824 KOW K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 4.8E-86 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 Pfam PF04452 RNA methyltransferase 20 236 2.5E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 SUPERFAMILY SSF88697 2 70 9.19E-17 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 PIRSF PIRSF015601 2 242 2.8E-57 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 Gene3D G3DSA:3.40.1280.10 74 243 1.6E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 SUPERFAMILY SSF75217 75 242 1.88E-53 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_27210 b7322099f51df6375600b64cd8d532c4 243 Gene3D G3DSA:2.40.240.20 1 71 1.7E-21 T 12-10-2018 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 Pfam PF00072 Response regulator receiver domain 723 830 3.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 SUPERFAMILY SSF55874 532 683 7.07E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 SMART SM00387 574 683 1.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 SUPERFAMILY SSF52172 721 837 4.98E-31 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 Gene3D G3DSA:3.40.50.2300 716 841 3.4E-32 T 12-10-2018 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 3.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 3.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 3.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 3.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 5.2E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 SMART SM00448 721 831 1.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 Gene3D G3DSA:3.30.565.10 535 685 3.0E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 SMART SM00388 461 530 8.3E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 SUPERFAMILY SSF47384 452 519 4.71E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 Gene3D G3DSA:1.10.287.130 424 522 8.4E-7 T 12-10-2018 K04M3_20280 7c028c5e47d79bdd7bafad2afe57736e 846 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 4.1E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_25370 fffbd88b3d3d78864ab1f6b169bf1fbb 782 Gene3D G3DSA:2.40.10.220 466 582 1.1E-6 T 12-10-2018 K04M3_25370 fffbd88b3d3d78864ab1f6b169bf1fbb 782 SUPERFAMILY SSF141371 466 554 5.36E-8 T 12-10-2018 K04M3_25370 fffbd88b3d3d78864ab1f6b169bf1fbb 782 Pfam PF07238 PilZ domain 145 228 1.1E-7 T 12-10-2018 IPR009875 PilZ domain GO:0035438 K04M3_25370 fffbd88b3d3d78864ab1f6b169bf1fbb 782 Pfam PF07238 PilZ domain 470 560 1.7E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 K04M3_02050 3e970919b619ff031146b5159b6c215f 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 12 123 1.8E-9 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal K04M3_02050 3e970919b619ff031146b5159b6c215f 372 SUPERFAMILY SSF52283 6 174 1.7E-23 T 12-10-2018 K04M3_02050 3e970919b619ff031146b5159b6c215f 372 SMART SM01003 8 138 9.7E-6 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal K04M3_02050 3e970919b619ff031146b5159b6c215f 372 Gene3D G3DSA:3.40.50.720 11 354 1.5E-56 T 12-10-2018 K04M3_02050 3e970919b619ff031146b5159b6c215f 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 158 353 1.5E-12 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain K04M3_02050 3e970919b619ff031146b5159b6c215f 372 Gene3D G3DSA:3.40.50.720 131 310 1.5E-56 T 12-10-2018 K04M3_02050 3e970919b619ff031146b5159b6c215f 372 SMART SM01002 149 302 2.9E-6 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain K04M3_02050 3e970919b619ff031146b5159b6c215f 372 SUPERFAMILY SSF51735 154 307 5.73E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_26000 8975d76585d593d509417078384cd2c0 409 Gene3D G3DSA:1.10.3430.10 2 408 2.7E-119 T 12-10-2018 IPR029020 Ammonium/urea transporter K04M3_26000 8975d76585d593d509417078384cd2c0 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.3E-100 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 K04M3_26000 8975d76585d593d509417078384cd2c0 409 SUPERFAMILY SSF111352 12 383 6.8E-106 T 12-10-2018 K04M3_26000 8975d76585d593d509417078384cd2c0 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 K04M3_26000 8975d76585d593d509417078384cd2c0 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 4.6E-206 T 12-10-2018 IPR019879 Ammonium transporter, marine subtype K04M3_21440 9c4cf85fbd54168793d410a397330440 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_21440 9c4cf85fbd54168793d410a397330440 323 SUPERFAMILY SSF52540 31 301 2.11E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21440 9c4cf85fbd54168793d410a397330440 323 SMART SM00382 32 238 2.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_21440 9c4cf85fbd54168793d410a397330440 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 9.6E-24 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_21440 9c4cf85fbd54168793d410a397330440 323 Gene3D G3DSA:3.40.50.300 1 322 2.9E-97 T 12-10-2018 K04M3_21440 9c4cf85fbd54168793d410a397330440 323 Pfam PF00005 ABC transporter 24 180 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_21440 9c4cf85fbd54168793d410a397330440 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.6E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_35810 d75e4a7d8588365abfbd69124b7998cf 343 SUPERFAMILY SSF53756 3 318 5.76E-36 T 12-10-2018 K04M3_35810 d75e4a7d8588365abfbd69124b7998cf 343 Gene3D G3DSA:3.40.50.2000 2 178 7.1E-9 T 12-10-2018 K04M3_35810 d75e4a7d8588365abfbd69124b7998cf 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 158 2.8E-11 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_35810 d75e4a7d8588365abfbd69124b7998cf 343 Gene3D G3DSA:3.40.50.2000 180 333 6.3E-15 T 12-10-2018 K04M3_35810 d75e4a7d8588365abfbd69124b7998cf 343 Pfam PF13692 Glycosyl transferases group 1 182 310 1.8E-12 T 12-10-2018 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 Gene3D G3DSA:3.40.50.1370 151 319 1.4E-145 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 SUPERFAMILY SSF53671 4 333 3.67E-98 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.873 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 Gene3D G3DSA:3.40.50.1370 5 329 1.4E-145 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 4.7E-132 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.7E-46 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 9.1E-56 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 K04M3_27840 a1f7cd380ae0d7eb845a42432d15002a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.9E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 SUPERFAMILY SSF55060 178 294 4.32E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 12-10-2018 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 12-10-2018 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 12-10-2018 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 12-10-2018 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 12-10-2018 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 4.6E-110 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 SUPERFAMILY SSF54211 3 191 3.49E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 Pfam PF08544 GHMP kinases C terminal 218 291 1.9E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 Gene3D G3DSA:3.30.230.10 5 173 7.5E-89 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.226 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 Gene3D G3DSA:3.30.70.890 174 283 7.5E-89 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily K04M3_04640 aa2ae3c53c24b62c20d79adc3bf2f3db 318 PIRSF PIRSF000676 1 316 6.1E-80 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal K04M3_04340 821f071d9b13679daadb04a306e9daea 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 399 38.164 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.4E-39 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 SUPERFAMILY SSF52490 13 208 2.88E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 SUPERFAMILY SSF55307 204 320 6.64E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 SMART SM00865 207 325 1.9E-56 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 Gene3D G3DSA:3.40.50.1440 5 220 6.4E-80 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 333 2.5E-136 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 SMART SM00864 13 205 3.8E-112 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.2E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.2E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.2E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 K04M3_04340 821f071d9b13679daadb04a306e9daea 412 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.2E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 K04M3_43590 ff65e5b79629c7cf1eb18abca477aaff 155 Gene3D G3DSA:3.30.300.20 1 154 5.5E-51 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_43590 ff65e5b79629c7cf1eb18abca477aaff 155 SUPERFAMILY SSF82784 1 150 2.36E-48 T 12-10-2018 IPR036102 OsmC/Ohr superfamily K04M3_43590 ff65e5b79629c7cf1eb18abca477aaff 155 Pfam PF02566 OsmC-like protein 55 150 4.7E-16 T 12-10-2018 IPR003718 OsmC/Ohr family K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 SUPERFAMILY SSF51735 5 159 1.85E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 SMART SM00859 6 121 7.3E-41 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 Gene3D G3DSA:3.40.50.720 7 330 4.9E-152 T 12-10-2018 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.6E-129 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.305 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 9.2E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 Gene3D G3DSA:3.30.360.10 130 316 4.9E-152 T 12-10-2018 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 PIRSF PIRSF000148 4 337 1.7E-133 T 12-10-2018 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.3E-61 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_22310 3bb57d19418bdac6c5adb05dcca2d44a 337 SUPERFAMILY SSF55347 131 320 4.76E-78 T 12-10-2018 K04M3_01850 6b2b975dc956a47db1ef25c04046ba8d 310 SUPERFAMILY SSF53448 18 225 4.38E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01850 6b2b975dc956a47db1ef25c04046ba8d 310 Pfam PF00535 Glycosyl transferase family 2 18 172 1.4E-14 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_01850 6b2b975dc956a47db1ef25c04046ba8d 310 Gene3D G3DSA:3.90.550.10 9 268 1.9E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_20480 0a0d4410d59eabfb4d0304949644f8b7 180 Pfam PF00857 Isochorismatase family 7 155 4.0E-30 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 K04M3_20480 0a0d4410d59eabfb4d0304949644f8b7 180 Gene3D G3DSA:3.40.50.850 1 180 1.4E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_20480 0a0d4410d59eabfb4d0304949644f8b7 180 SUPERFAMILY SSF52499 1 180 3.92E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 SUPERFAMILY SSF50692 752 951 4.97E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 1.2E-56 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Gene3D G3DSA:2.40.40.20 767 951 1.3E-47 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 PIRSF PIRSF036643 11 442 1.2E-105 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 PIRSF PIRSF036643 641 678 370.0 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 PIRSF PIRSF036643 780 950 8.6E-16 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 PIRSF PIRSF036643 453 581 6.3E-10 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Gene3D G3DSA:3.40.50.740 126 617 4.5E-134 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 SUPERFAMILY SSF53706 60 646 5.5E-202 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 12-10-2018 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.4E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 SMART SM00926 61 115 3.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15900 eb590308d111c83d2a4a3fa1967986ca 951 Gene3D G3DSA:3.40.228.10 195 394 4.5E-134 T 12-10-2018 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 Pfam PF12833 Helix-turn-helix domain 30 106 7.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 Gene3D G3DSA:1.10.10.60 66 120 1.1E-13 T 12-10-2018 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 SUPERFAMILY SSF46689 59 107 1.03E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 SUPERFAMILY SSF55136 151 299 5.58E-30 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 Gene3D G3DSA:3.20.80.10 150 299 2.2E-38 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 SMART SM00871 150 299 6.7E-25 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 SMART SM00342 23 106 2.0E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 8.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 8.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 Gene3D G3DSA:1.10.10.60 5 65 7.5E-14 T 12-10-2018 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 SUPERFAMILY SSF46689 6 57 4.72E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_33020 737eda6a27746f494732387dd19e7ee8 299 Pfam PF06445 GyrI-like small molecule binding domain 150 298 8.1E-25 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain K04M3_03970 af9ca81d5ebae1c524b485150bd3e38b 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 437 3.9E-107 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 K04M3_03970 af9ca81d5ebae1c524b485150bd3e38b 442 SUPERFAMILY SSF56954 1 430 1.83E-90 T 12-10-2018 K04M3_03970 af9ca81d5ebae1c524b485150bd3e38b 442 Gene3D G3DSA:1.20.1600.10 23 442 9.4E-119 T 12-10-2018 K04M3_03970 af9ca81d5ebae1c524b485150bd3e38b 442 Pfam PF02321 Outer membrane efflux protein 241 424 2.9E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_03970 af9ca81d5ebae1c524b485150bd3e38b 442 Pfam PF02321 Outer membrane efflux protein 25 216 1.4E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_46650 a149597b398d50acd4305582dfa22492 674 SUPERFAMILY SSF50447 243 370 9.34E-22 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_46650 a149597b398d50acd4305582dfa22492 674 Pfam PF03764 Elongation factor G, domain IV 457 575 1.6E-36 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 K04M3_46650 a149597b398d50acd4305582dfa22492 674 SUPERFAMILY SSF54211 457 577 1.34E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_46650 a149597b398d50acd4305582dfa22492 674 Gene3D G3DSA:3.30.70.870 390 459 3.1E-16 T 12-10-2018 K04M3_46650 a149597b398d50acd4305582dfa22492 674 Pfam PF14492 Elongation Factor G, domain II 382 454 4.2E-21 T 12-10-2018 K04M3_46650 a149597b398d50acd4305582dfa22492 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 141 1.3E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_46650 a149597b398d50acd4305582dfa22492 674 Gene3D G3DSA:2.40.30.10 267 389 4.7E-26 T 12-10-2018 K04M3_46650 a149597b398d50acd4305582dfa22492 674 Gene3D G3DSA:3.30.230.10 463 666 1.2E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_46650 a149597b398d50acd4305582dfa22492 674 SUPERFAMILY SSF52540 2 259 2.38E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46650 a149597b398d50acd4305582dfa22492 674 Gene3D G3DSA:3.40.50.300 1 264 9.0E-53 T 12-10-2018 K04M3_46650 a149597b398d50acd4305582dfa22492 674 SUPERFAMILY SSF54980 579 669 2.59E-20 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_46650 a149597b398d50acd4305582dfa22492 674 SUPERFAMILY SSF54980 381 457 1.01E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_46650 a149597b398d50acd4305582dfa22492 674 SMART SM00889 458 576 2.9E-53 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 K04M3_46650 a149597b398d50acd4305582dfa22492 674 SMART SM00838 578 666 8.2E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_46650 a149597b398d50acd4305582dfa22492 674 Gene3D G3DSA:3.30.70.240 582 653 1.2E-75 T 12-10-2018 K04M3_46650 a149597b398d50acd4305582dfa22492 674 Pfam PF00679 Elongation factor G C-terminus 579 665 2.4E-24 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_46650 a149597b398d50acd4305582dfa22492 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 1.7E-29 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 5.0E-24 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 5.0E-24 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 5.0E-24 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.0E-24 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.0E-24 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 1.3E-157 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Gene3D G3DSA:3.30.70.100 89 173 1.0E-13 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 4.9E-120 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 1.9E-31 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 SUPERFAMILY SSF81653 319 402 1.7E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 1.6E-151 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 6.5E-27 T 12-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.0E-6 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.0E-6 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.0E-6 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.0E-6 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 SUPERFAMILY SSF56784 500 781 3.26E-45 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Gene3D G3DSA:3.40.50.1000 482 720 3.0E-66 T 12-10-2018 IPR023214 HAD superfamily K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Pfam PF00122 E1-E2 ATPase 318 478 2.9E-45 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.5E-7 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 1.2E-71 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Gene3D G3DSA:3.40.1110.10 511 614 3.0E-66 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 SUPERFAMILY SSF55008 86 162 3.14E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 Gene3D G3DSA:2.70.150.20 292 407 1.6E-30 T 12-10-2018 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 SUPERFAMILY SSF81665 250 766 4.71E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 K04M3_16120 e3f964c4473ea8b26c86df4ce1f38666 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 12-10-2018 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.4E-65 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.467 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 Pfam PF00572 Ribosomal protein L13 15 138 3.6E-57 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 PIRSF PIRSF002181 1 142 9.9E-53 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 SUPERFAMILY SSF52161 1 140 1.15E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_04080 0d3dbe248aebd3fd2ece23f0bec281f0 142 Gene3D G3DSA:3.90.1180.10 1 142 4.8E-64 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_24870 e93651ca1f2f57d8729106d865ed1c62 269 Pfam PF00899 ThiF family 24 195 5.3E-38 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 K04M3_24870 e93651ca1f2f57d8729106d865ed1c62 269 SUPERFAMILY SSF69572 9 268 3.79E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 K04M3_24870 e93651ca1f2f57d8729106d865ed1c62 269 Gene3D G3DSA:3.40.50.720 5 269 1.6E-109 T 12-10-2018 K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SMART SM00267 602 774 8.8E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Pfam PF13426 PAS domain 502 601 3.2E-10 T 12-10-2018 IPR000014 PAS domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SUPERFAMILY SSF141868 792 1038 1.96E-71 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SUPERFAMILY SSF55785 476 600 6.44E-19 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SMART SM00052 786 1033 5.7E-62 T 12-10-2018 IPR001633 EAL domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SMART SM00086 564 602 0.21 T 12-10-2018 IPR001610 PAC motif K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SMART SM00086 437 479 14.0 T 12-10-2018 IPR001610 PAC motif K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Gene3D G3DSA:3.30.70.270 603 773 3.2E-45 T 12-10-2018 K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 362 486 7.4E-7 T 12-10-2018 IPR000014 PAS domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 609 7.1E-17 T 12-10-2018 IPR000014 PAS domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 3.4E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Gene3D G3DSA:3.30.450.20 353 481 1.0E-8 T 12-10-2018 K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SUPERFAMILY SSF55785 354 477 7.68E-8 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SUPERFAMILY SSF55073 618 774 1.73E-40 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Pfam PF00563 EAL domain 794 1028 9.0E-60 T 12-10-2018 IPR001633 EAL domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Gene3D G3DSA:3.40.50.2300 137 258 2.8E-7 T 12-10-2018 K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Gene3D G3DSA:3.30.450.20 482 600 1.2E-18 T 12-10-2018 K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 4.3E-32 T 12-10-2018 IPR000160 GGDEF domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Gene3D G3DSA:3.20.20.450 774 1035 6.3E-77 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 Gene3D G3DSA:3.40.50.2300 78 277 2.8E-7 T 12-10-2018 K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SMART SM00091 366 432 280.0 T 12-10-2018 IPR000014 PAS domain K04M3_00620 2a48380c8a68307db9287cf5fce1a40c 1041 SMART SM00091 491 558 0.0016 T 12-10-2018 IPR000014 PAS domain K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.0E-247 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 SUPERFAMILY SSF47831 24 143 6.41E-33 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 Gene3D G3DSA:1.10.274.10 21 146 1.7E-80 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 SUPERFAMILY SSF52009 125 243 1.27E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 9.3E-125 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 PIRSF PIRSF000732 1 574 1.7E-219 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 Gene3D G3DSA:3.50.30.10 4 233 1.7E-80 T 12-10-2018 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 SUPERFAMILY SSF51621 249 549 9.95E-110 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.2E-32 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 12-10-2018 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 12-10-2018 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 12-10-2018 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 12-10-2018 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 Gene3D G3DSA:3.20.20.60 234 574 2.1E-125 T 12-10-2018 K04M3_07830 164ea15a96e17839cca92bdfdfec1c59 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.9E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 K04M3_17320 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_17320 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 12-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 K04M3_17600 38487b48f51d4e29a5e4f4e3c8a8d2fb 506 Gene3D G3DSA:3.40.309.10 266 464 8.2E-165 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_17600 38487b48f51d4e29a5e4f4e3c8a8d2fb 506 SUPERFAMILY SSF53720 13 497 1.31E-161 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_17600 38487b48f51d4e29a5e4f4e3c8a8d2fb 506 Gene3D G3DSA:3.40.605.10 23 492 8.2E-165 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_17600 38487b48f51d4e29a5e4f4e3c8a8d2fb 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_17600 38487b48f51d4e29a5e4f4e3c8a8d2fb 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_17600 38487b48f51d4e29a5e4f4e3c8a8d2fb 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.7E-165 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_12620 ede00c85bbd69dd75693a11695335395 218 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 96 5.9E-6 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 K04M3_12620 ede00c85bbd69dd75693a11695335395 218 Gene3D G3DSA:3.60.130.10 10 218 1.1E-19 T 12-10-2018 K04M3_12620 ede00c85bbd69dd75693a11695335395 218 SUPERFAMILY SSF51197 4 218 2.52E-14 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 323 337 1.2E-14 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 261 1.2E-14 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.2E-14 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 96 118 1.2E-14 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 Gene3D G3DSA:3.30.390.120 406 464 1.0E-15 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 Gene3D G3DSA:3.50.50.60 98 370 2.4E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 Gene3D G3DSA:2.20.28.10 1 55 2.0E-25 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 Gene3D G3DSA:3.50.50.60 200 334 2.4E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 116 1.7E-22 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 254 1.7E-22 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 192 210 1.7E-22 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 1.7E-22 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 322 338 1.7E-22 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 Pfam PF00301 Rubredoxin 3 49 8.8E-21 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 97 374 3.1E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 SUPERFAMILY SSF57802 1 54 1.21E-20 T 12-10-2018 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 SUPERFAMILY SSF51905 95 372 1.09E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00163 Rubredoxin signature 3 19 1.4E-6 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 K04M3_35630 22edd6b1ae3634d02acdfe4237fa2a00 477 PRINTS PR00163 Rubredoxin signature 33 49 1.4E-6 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 K04M3_36490 2af6224a0498dcb52ff7b71174236052 654 Gene3D G3DSA:3.40.50.720 420 578 1.1E-35 T 12-10-2018 K04M3_36490 2af6224a0498dcb52ff7b71174236052 654 Pfam PF02254 TrkA-N domain 422 534 2.7E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_36490 2af6224a0498dcb52ff7b71174236052 654 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 4.7E-57 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_36490 2af6224a0498dcb52ff7b71174236052 654 Gene3D G3DSA:1.20.1530.20 2 399 6.2E-76 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily K04M3_36490 2af6224a0498dcb52ff7b71174236052 654 SUPERFAMILY SSF51735 420 560 9.68E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_36490 2af6224a0498dcb52ff7b71174236052 654 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 3.9E-73 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 K04M3_42460 11490aec3cf56b154c4d377151d28374 358 SUPERFAMILY SSF53383 22 335 1.18E-72 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_42460 11490aec3cf56b154c4d377151d28374 358 Gene3D G3DSA:3.90.1150.10 254 356 2.1E-9 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_42460 11490aec3cf56b154c4d377151d28374 358 Pfam PF01212 Beta-eliminating lyase 19 293 4.2E-38 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 K04M3_42460 11490aec3cf56b154c4d377151d28374 358 Gene3D G3DSA:3.40.640.10 3 253 2.0E-68 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_37070 4eae2cc5c3624218fa1bd9281d557e56 427 Pfam PF01551 Peptidase family M23 295 388 2.4E-32 T 12-10-2018 IPR016047 Peptidase M23 K04M3_37070 4eae2cc5c3624218fa1bd9281d557e56 427 SUPERFAMILY SSF51261 143 390 3.92E-68 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_37070 4eae2cc5c3624218fa1bd9281d557e56 427 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 154 3.0E-6 T 12-10-2018 IPR007340 Opacity-associated protein A K04M3_37070 4eae2cc5c3624218fa1bd9281d557e56 427 Gene3D G3DSA:2.70.70.10 265 395 2.2E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_37070 4eae2cc5c3624218fa1bd9281d557e56 427 Gene3D G3DSA:3.10.450.350 66 158 2.4E-33 T 12-10-2018 K04M3_37070 4eae2cc5c3624218fa1bd9281d557e56 427 Gene3D G3DSA:3.10.450.350 160 264 2.6E-32 T 12-10-2018 K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 Gene3D G3DSA:1.10.1270.20 161 253 3.7E-35 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 117.598 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 SUPERFAMILY SSF75217 1 245 3.14E-102 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 Gene3D G3DSA:3.40.1280.10 1 160 4.4E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 PIRSF PIRSF000386 1 252 1.1E-100 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.6E-109 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 K04M3_26350 d3234d54ecbdf518026e0a9f3852f359 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.4E-69 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 K04M3_21860 a384f5762477af838297727165ac688f 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.597 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 K04M3_21860 a384f5762477af838297727165ac688f 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-31 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 K04M3_21860 a384f5762477af838297727165ac688f 75 PIRSF PIRSF006188 1 72 2.6E-37 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 K04M3_21860 a384f5762477af838297727165ac688f 75 Gene3D G3DSA:1.10.3390.10 1 75 3.8E-33 T 12-10-2018 IPR023202 YejL-like superfamily K04M3_21860 a384f5762477af838297727165ac688f 75 SUPERFAMILY SSF158651 1 75 2.88E-29 T 12-10-2018 IPR023202 YejL-like superfamily K04M3_21860 a384f5762477af838297727165ac688f 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 K04M3_09260 0100240640e85a47f752809c7eed09f8 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 K04M3_09260 0100240640e85a47f752809c7eed09f8 288 Gene3D G3DSA:3.90.226.10 3 225 1.3E-83 T 12-10-2018 K04M3_09260 0100240640e85a47f752809c7eed09f8 288 SUPERFAMILY SSF52096 22 284 8.54E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_09260 0100240640e85a47f752809c7eed09f8 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal K04M3_09260 0100240640e85a47f752809c7eed09f8 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 1.7E-77 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_09260 0100240640e85a47f752809c7eed09f8 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.222 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 K04M3_09260 0100240640e85a47f752809c7eed09f8 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 4.8E-145 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 K04M3_24420 7d8894e83e0ed4877c90a073ee556331 364 SUPERFAMILY SSF52151 11 333 1.86E-53 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_24420 7d8894e83e0ed4877c90a073ee556331 364 Pfam PF01734 Patatin-like phospholipase 14 203 8.2E-26 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 K04M3_24420 7d8894e83e0ed4877c90a073ee556331 364 Gene3D G3DSA:3.40.1090.10 4 359 2.0E-66 T 12-10-2018 K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 PIRSF PIRSF009451 8 504 1.8E-251 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 SUPERFAMILY SSF100950 237 502 3.49E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 Gene3D G3DSA:3.40.1080.10 4 233 3.0E-97 T 12-10-2018 K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 Gene3D G3DSA:3.40.1080.10 235 504 2.9E-121 T 12-10-2018 K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 SUPERFAMILY SSF100950 19 233 8.7E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 33 503 1.3E-234 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 K04M3_02500 f86a6e01e508150e0fe7bc2970433853 505 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 38 502 5.5E-247 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 271 797 3.5E-139 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 SUPERFAMILY SSF53062 1 127 3.4E-33 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR00107 Phosphocarrier protein signature 166 182 8.9E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR00107 Phosphocarrier protein signature 206 223 8.9E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR00107 Phosphocarrier protein signature 191 206 8.9E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 SUPERFAMILY SSF51621 514 797 7.07E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Gene3D G3DSA:3.40.50.510 1 130 5.7E-43 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 SUPERFAMILY SSF52009 384 504 3.27E-30 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 SUPERFAMILY SSF47831 296 402 2.35E-23 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 551 570 1.0E-23 T 12-10-2018 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 1.0E-23 T 12-10-2018 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 1.0E-23 T 12-10-2018 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 1.0E-23 T 12-10-2018 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Pfam PF03610 PTS system fructose IIA component 3 113 1.8E-24 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 442 453 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Pfam PF05524 PEP-utilising enzyme, N-terminal 273 385 4.8E-23 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Gene3D G3DSA:1.10.274.10 290 405 1.8E-60 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 514 796 1.2E-97 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 410 483 4.9E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 6.1E-37 T 12-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Gene3D G3DSA:3.50.30.10 273 491 1.8E-60 T 12-10-2018 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Gene3D G3DSA:3.20.20.60 492 799 8.6E-109 T 12-10-2018 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 233 5.6E-17 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 SUPERFAMILY SSF55594 157 240 2.09E-20 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Pfam PF00381 PTS HPr component phosphorylation site 158 234 2.9E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 Gene3D G3DSA:3.30.1340.10 155 241 9.2E-22 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_03650 3840d239611bf370e47a1a8690b336f1 799 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 SUPERFAMILY SSF50800 5 264 2.88E-14 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 1.5E-14 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Gene3D G3DSA:2.40.30.10 279 378 4.3E-25 T 12-10-2018 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Gene3D G3DSA:3.40.50.80 381 506 6.6E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Pfam PF03473 MOSC domain 138 262 2.9E-30 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 SUPERFAMILY SSF54292 501 604 1.97E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 531 597 2.6E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 118 1.2E-29 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Gene3D G3DSA:3.10.20.30 507 605 7.3E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 491 3.0E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 SUPERFAMILY SSF141673 6 133 1.83E-29 T 12-10-2018 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 6.4E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 6.4E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 6.4E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 6.4E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 6.4E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 SUPERFAMILY SSF63380 275 380 7.88E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_36020 c540768e6cc1fcb16e96bf2a98d3f2c1 605 SUPERFAMILY SSF52343 368 508 8.25E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_49600 d69520c0a1f9dbb27bc427b8bf984c37 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 3.9E-141 T 12-10-2018 IPR021781 Protein of unknown function DUF3346 K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 Pfam PF04055 Radical SAM superfamily 25 196 5.3E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 9.5E-146 T 12-10-2018 K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 Gene3D G3DSA:3.20.20.70 15 411 1.8E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 2.1E-7 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 5.9E-18 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 SUPERFAMILY SSF102114 24 372 1.83E-36 T 12-10-2018 K04M3_14740 74f370ab98db7a2ce7aec424d758dd53 441 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 9.0E-6 T 12-10-2018 K04M3_05270 2573f2cd250ed123d1c114382a10e216 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 5.6E-60 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase K04M3_05270 2573f2cd250ed123d1c114382a10e216 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 7.0E-72 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase K04M3_05270 2573f2cd250ed123d1c114382a10e216 242 SUPERFAMILY SSF64438 3 241 4.4E-82 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic K04M3_05270 2573f2cd250ed123d1c114382a10e216 242 Gene3D G3DSA:3.60.140.10 1 240 2.2E-86 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 SMART SM00382 253 376 5.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Gene3D G3DSA:3.40.50.300 226 500 8.3E-127 T 12-10-2018 K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 SUPERFAMILY SSF52540 107 497 2.21E-107 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Pfam PF00437 Type II/IV secretion system protein 127 392 2.5E-91 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Gene3D G3DSA:3.30.450.90 88 225 1.1E-55 T 12-10-2018 K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 Gene3D G3DSA:3.30.300.160 1 78 4.6E-39 T 12-10-2018 K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 2.1E-227 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 K04M3_01200 a6908b615ad8b4a7ddfa0ac37266cfb8 500 SUPERFAMILY SSF160246 12 78 2.12E-17 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Gene3D G3DSA:1.10.420.20 191 397 2.9E-217 T 12-10-2018 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Gene3D G3DSA:1.10.420.10 578 699 5.4E-147 T 12-10-2018 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Gene3D G3DSA:1.10.520.10 28 432 2.9E-217 T 12-10-2018 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.185 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 3.6E-54 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 3.6E-54 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 3.6E-54 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 3.6E-54 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 3.6E-54 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 9.9E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 9.9E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 9.9E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 9.9E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 9.9E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Gene3D G3DSA:1.10.520.10 433 723 5.4E-147 T 12-10-2018 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 SUPERFAMILY SSF48113 432 723 2.8E-112 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 SUPERFAMILY SSF48113 19 431 2.95E-152 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Pfam PF00141 Peroxidase 406 698 5.8E-36 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_42720 1863a97f692f6bbd31c7296987423db6 724 Pfam PF00141 Peroxidase 71 398 8.0E-50 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 K04M3_38830 4d3097e7b1e6e09d641089f0ee85c458 193 Gene3D G3DSA:1.10.10.10 133 192 1.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_38830 4d3097e7b1e6e09d641089f0ee85c458 193 SMART SM01012 131 186 7.7E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 K04M3_38830 4d3097e7b1e6e09d641089f0ee85c458 193 Pfam PF03861 ANTAR domain 134 186 4.1E-17 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 K04M3_38830 4d3097e7b1e6e09d641089f0ee85c458 193 SUPERFAMILY SSF52172 2 186 8.95E-25 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 Pfam PF00583 Acetyltransferase (GNAT) family 193 278 1.3E-12 T 12-10-2018 IPR000182 GNAT domain K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 5.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 5.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 5.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 5.0E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 Gene3D G3DSA:3.40.630.30 144 301 1.0E-23 T 12-10-2018 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 Gene3D G3DSA:1.10.10.10 2 140 2.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 SUPERFAMILY SSF46785 8 135 1.35E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 SMART SM00347 22 121 1.9E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 Pfam PF12802 MarR family 28 85 2.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_27800 bbca7afd1224e0205883ce45daa8cfa4 301 SUPERFAMILY SSF55729 144 301 6.69E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_26310 5638e656f79a90872ad360b9efa34264 204 Gene3D G3DSA:3.40.50.300 1 204 2.3E-69 T 12-10-2018 K04M3_26310 5638e656f79a90872ad360b9efa34264 204 SUPERFAMILY SSF52540 1 193 1.72E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26310 5638e656f79a90872ad360b9efa34264 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 180 9.4E-68 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 K04M3_26310 5638e656f79a90872ad360b9efa34264 204 Pfam PF01121 Dephospho-CoA kinase 3 179 9.9E-73 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 K04M3_26310 5638e656f79a90872ad360b9efa34264 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.967 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 K04M3_32890 2562e1f9eaed3dfb07b7898862db4ab3 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 104 1.1E-10 T 12-10-2018 K04M3_32890 2562e1f9eaed3dfb07b7898862db4ab3 139 SUPERFAMILY SSF54593 3 130 8.06E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_32890 2562e1f9eaed3dfb07b7898862db4ab3 139 Gene3D G3DSA:3.10.180.10 1 132 4.4E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_48800 b5480daf43c6cf850f004bd4ba4ec6bf 141 SUPERFAMILY SSF54593 9 134 8.66E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_48800 b5480daf43c6cf850f004bd4ba4ec6bf 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 9.5E-10 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_48800 b5480daf43c6cf850f004bd4ba4ec6bf 141 Gene3D G3DSA:3.10.180.10 6 138 4.6E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_31690 48d1d8590667bccf6121631a0bdd3afa 84 SUPERFAMILY SSF54285 19 84 1.28E-14 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp K04M3_31690 48d1d8590667bccf6121631a0bdd3afa 84 Pfam PF02597 ThiS family 25 84 1.8E-12 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 K04M3_31690 48d1d8590667bccf6121631a0bdd3afa 84 Gene3D G3DSA:3.10.20.30 19 84 2.1E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_31690 48d1d8590667bccf6121631a0bdd3afa 84 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 21 84 1.8E-16 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 SMART SM00863 171 220 1.6E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.40.50.800 533 642 8.3E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.54.20 131 188 5.4E-64 T 12-10-2018 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.189 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.980.10 70 223 5.4E-64 T 12-10-2018 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.1E-241 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF55186 65 242 6.41E-65 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 1.2E-49 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 12-10-2018 IPR004154 Anticodon-binding K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.930.10 224 532 3.9E-129 T 12-10-2018 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF55681 244 527 1.97E-99 T 12-10-2018 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 K04M3_12360 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 12-10-2018 K04M3_01900 0f581803ab3099b01c9ac90f7c5cc009 422 SUPERFAMILY SSF53756 54 407 6.28E-11 T 12-10-2018 K04M3_01900 0f581803ab3099b01c9ac90f7c5cc009 422 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 3.4E-61 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 K04M3_01900 0f581803ab3099b01c9ac90f7c5cc009 422 Gene3D G3DSA:3.40.50.2000 215 405 2.1E-61 T 12-10-2018 K04M3_01900 0f581803ab3099b01c9ac90f7c5cc009 422 Gene3D G3DSA:3.40.50.11720 34 210 1.4E-46 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 Pfam PF05746 DALR anticodon binding domain 580 677 4.2E-10 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 SUPERFAMILY SSF109604 351 489 6.59E-12 T 12-10-2018 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 3.5E-206 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 6.3E-297 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_00100 1df41ed0c08ff5a5b6006837ca110d11 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.97 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 Pfam PF01817 Chorismate mutase type II 12 91 2.5E-16 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 SMART SM00830 12 93 1.5E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 SUPERFAMILY SSF48600 7 95 6.96E-19 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 SUPERFAMILY SSF55021 284 381 1.77E-25 T 12-10-2018 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.8E-27 T 12-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:1.20.59.10 3 112 6.2E-31 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:3.40.190.10 113 287 2.1E-55 T 12-10-2018 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:3.40.190.10 193 278 2.1E-55 T 12-10-2018 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 Pfam PF00800 Prephenate dehydratase 110 291 1.7E-60 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 Gene3D G3DSA:3.30.70.260 295 383 3.6E-25 T 12-10-2018 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 SUPERFAMILY SSF53850 109 295 4.02E-56 T 12-10-2018 K04M3_05220 2bcf9490cbb0a6b59a098c796d4c2c31 392 PIRSF PIRSF001500 1 384 6.0E-142 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 K04M3_14610 820b5527482d16d743c65ca31d0d626e 335 Gene3D G3DSA:3.40.190.10 29 330 7.8E-140 T 12-10-2018 K04M3_14610 820b5527482d16d743c65ca31d0d626e 335 SUPERFAMILY SSF53850 28 332 9.77E-89 T 12-10-2018 K04M3_14610 820b5527482d16d743c65ca31d0d626e 335 Gene3D G3DSA:3.40.190.100 117 258 7.8E-140 T 12-10-2018 K04M3_14610 820b5527482d16d743c65ca31d0d626e 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 317 2.7E-50 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 SUPERFAMILY SSF52540 276 494 1.85E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 Pfam PF12848 ABC transporter 217 295 2.6E-27 T 12-10-2018 IPR032781 ABC-transporter extension domain K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 Pfam PF00005 ABC transporter 17 178 9.1E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 SMART SM00382 26 223 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 SMART SM00382 337 503 9.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 Gene3D G3DSA:3.40.50.300 7 273 1.5E-59 T 12-10-2018 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 Gene3D G3DSA:3.40.50.300 276 540 1.1E-54 T 12-10-2018 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 Pfam PF00005 ABC transporter 328 459 4.5E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_29260 6a4d508dfbbca9fbff40723dfe8a2c50 639 SUPERFAMILY SSF52540 2 258 1.78E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 Pfam PF00696 Amino acid kinase family 15 243 1.0E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 SMART SM00359 286 369 1.5E-18 T 12-10-2018 IPR002478 PUA domain GO:0003723 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.847 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 Gene3D G3DSA:3.40.1160.10 5 274 1.6E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 PIRSF PIRSF000729 9 378 2.0E-136 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 SUPERFAMILY SSF53633 15 265 1.2E-64 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 Pfam PF01472 PUA domain 286 360 6.6E-23 T 12-10-2018 IPR002478 PUA domain GO:0003723 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 SUPERFAMILY SSF88697 286 376 5.52E-25 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 Gene3D G3DSA:2.30.130.10 275 377 3.2E-31 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.9E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.9E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.9E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.9E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.9E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 K04M3_06540 dcd03ad9943bfb1d37f32184bc18d4aa 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 1.6E-147 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.2E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 SUPERFAMILY SSF52540 5 252 3.94E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.5E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 Gene3D G3DSA:3.40.50.300 3 326 2.7E-90 T 12-10-2018 K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 SMART SM00382 34 231 1.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_25900 70b56c50bf5693cd2fb249611323c5a8 327 Pfam PF00005 ABC transporter 26 181 9.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.3E-151 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 SUPERFAMILY SSF52402 5 247 2.65E-56 T 12-10-2018 K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 Gene3D G3DSA:2.40.30.10 287 372 3.1E-34 T 12-10-2018 K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 Gene3D G3DSA:2.30.30.280 216 286 6.4E-25 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 Pfam PF03054 tRNA methyl transferase 7 365 1.3E-141 T 12-10-2018 K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 Gene3D G3DSA:3.40.50.620 1 214 3.4E-94 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_11050 a437ae78205ff8760932ff9e8c6491bf 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.825 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 SUPERFAMILY SSF101386 138 240 5.42E-24 T 12-10-2018 K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 Gene3D G3DSA:1.10.287.1080 132 265 1.2E-45 T 12-10-2018 K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 Gene3D G3DSA:1.10.287.1080 2 126 6.0E-46 T 12-10-2018 K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 8.5E-104 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 SUPERFAMILY SSF101386 3 105 6.54E-26 T 12-10-2018 K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 231 1.8E-5 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core K04M3_26770 a92bd79fce6da231ac0c6f608e699ff6 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 4.6E-28 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 Pfam PF01467 Cytidylyltransferase-like 345 468 3.1E-14 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 Gene3D G3DSA:3.40.50.620 322 474 4.9E-37 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.4E-61 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 7.4E-48 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 4.6E-127 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.979 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 SUPERFAMILY SSF52374 340 471 3.94E-23 T 12-10-2018 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 SUPERFAMILY SSF53613 12 302 1.37E-60 T 12-10-2018 IPR029056 Ribokinase-like K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_03960 a227c75e2c340b8655a4df67ac1f89bd 476 Gene3D G3DSA:3.40.1190.20 6 310 7.7E-113 T 12-10-2018 IPR029056 Ribokinase-like K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 SUPERFAMILY SSF52440 1 113 5.47E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.3E-84 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 12-10-2018 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 SMART SM00878 336 441 1.2E-64 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 SUPERFAMILY SSF56059 83 346 1.4E-70 T 12-10-2018 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.1E-244 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 Gene3D G3DSA:3.30.470.20 86 433 8.5E-157 T 12-10-2018 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 Gene3D G3DSA:3.30.1490.20 131 203 8.5E-157 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.5E-37 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 SUPERFAMILY SSF51246 331 444 1.52E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 K04M3_30220 732e79d2e267ddde7447c2dfe4af455b 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 SUPERFAMILY SSF82693 46 127 3.4E-20 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 SUPERFAMILY SSF82866 294 498 1.83E-42 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 SUPERFAMILY SSF82714 716 800 3.4E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:1.20.1640.10 509 1030 8.5E-275 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:3.30.2090.10 716 804 8.5E-275 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:3.30.70.1430 562 664 8.5E-275 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 SUPERFAMILY SSF82714 185 269 3.27E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:3.30.70.1320 135 328 8.5E-275 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 2.5E-247 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:3.30.2090.10 182 274 8.5E-275 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 SUPERFAMILY SSF82693 137 328 1.83E-22 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 SUPERFAMILY SSF82866 798 1037 5.62E-52 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:3.30.70.1440 665 862 8.5E-275 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:1.20.1640.10 15 508 8.5E-275 T 12-10-2018 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.8E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36640 e7cccb3f947b21f115ebf22ae796ba72 1069 Gene3D G3DSA:3.30.70.1430 42 812 8.5E-275 T 12-10-2018 K04M3_44190 f975fc951048075a235f3db149eb3ec5 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 111 3.6E-28 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 Gene3D G3DSA:3.40.50.12740 4 205 2.6E-65 T 12-10-2018 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 4.7E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 4.7E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 4.7E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 SUPERFAMILY SSF52172 5 133 2.7E-33 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 SMART SM00421 145 202 3.0E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 SUPERFAMILY SSF46894 133 204 1.9E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 Pfam PF00072 Response regulator receiver domain 6 117 3.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 SMART SM00448 4 117 9.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45040 11de67d8b3f68f8e875c6c95a4963237 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 3.8E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 Gene3D G3DSA:3.30.70.1450 298 378 1.4E-6 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 396 545 2.2E-22 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 Gene3D G3DSA:3.30.70.1450 217 292 1.6E-6 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 Pfam PF06826 Predicted Permease Membrane Region 391 559 1.1E-39 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 Pfam PF06826 Predicted Permease Membrane Region 18 176 4.1E-32 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 SUPERFAMILY SSF116726 292 378 4.05E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 SUPERFAMILY SSF116726 221 287 5.36E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 Pfam PF02080 TrkA-C domain 312 377 2.5E-7 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 Pfam PF02080 TrkA-C domain 223 286 6.8E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_18620 24665013e4aceb8eafce583d809f5b16 563 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 6 562 2.8E-187 T 12-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 4.7E-61 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.0E-30 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 SUPERFAMILY SSF54893 2 100 9.03E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 SUPERFAMILY SSF57825 101 151 6.8E-16 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Gene3D G3DSA:3.30.70.140 1 100 1.1E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 3.6E-19 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Gene3D G3DSA:2.30.30.20 101 153 9.8E-25 T 12-10-2018 K04M3_27870 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.847 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 1.7E-12 T 12-10-2018 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Pfam PF00183 Hsp90 protein 226 632 1.9E-125 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Gene3D G3DSA:3.30.565.10 6 219 4.1E-76 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 SUPERFAMILY SSF55874 10 215 9.95E-64 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PIRSF PIRSF002583 1 634 5.6E-212 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 SUPERFAMILY SSF110942 520 632 8.11E-33 T 12-10-2018 IPR037196 HSP90, C-terminal domain K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Gene3D G3DSA:3.40.50.11260 410 501 6.4E-35 T 12-10-2018 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.298 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Gene3D G3DSA:1.20.120.790 502 632 3.9E-41 T 12-10-2018 IPR037196 HSP90, C-terminal domain K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 Gene3D G3DSA:3.30.230.80 237 409 2.5E-70 T 12-10-2018 K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 SMART SM00387 32 189 8.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 SUPERFAMILY SSF54211 238 493 7.51E-100 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_08170 1c687258c415a151f089a1d3e1c3ccb4 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 3.0E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 SUPERFAMILY SSF47203 361 508 6.93E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 SUPERFAMILY SSF56645 121 356 8.77E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.4E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 Gene3D G3DSA:1.10.540.10 123 236 6.6E-99 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 234 6.9E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 Gene3D G3DSA:1.20.140.10 361 508 6.6E-99 T 12-10-2018 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 7.6E-115 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 K04M3_23680 1562477016aa3544bd0a0f03d1325b52 814 Gene3D G3DSA:2.40.110.10 237 360 6.6E-99 T 12-10-2018 K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 Gene3D G3DSA:2.160.20.70 113 219 6.9E-31 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.0E-32 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.227 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 1.4E-31 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 SUPERFAMILY SSF63848 113 216 6.28E-30 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 Gene3D G3DSA:3.30.750.120 2 112 1.4E-34 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily K04M3_08690 262933049ca045c5a4a9cde323fb849d 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.0E-79 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 K04M3_28420 22c4e625a8e1db7d6d68483d01aea494 290 Pfam PF00483 Nucleotidyl transferase 9 265 9.8E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 K04M3_28420 22c4e625a8e1db7d6d68483d01aea494 290 SUPERFAMILY SSF53448 2 271 4.59E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_28420 22c4e625a8e1db7d6d68483d01aea494 290 Gene3D G3DSA:3.90.550.10 1 278 1.4E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_28420 22c4e625a8e1db7d6d68483d01aea494 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.7E-125 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF82697 1 150 1.15E-49 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF55326 619 816 4.19E-69 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF56042 825 1035 1.39E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 968 3.5E-14 T 12-10-2018 IPR010918 PurM-like, C-terminal domain K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 1.3E-28 T 12-10-2018 IPR010918 PurM-like, C-terminal domain K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Gene3D G3DSA:3.30.1330.10 214 419 1.6E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Gene3D G3DSA:3.40.50.880 983 1297 4.7E-140 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Gene3D G3DSA:3.90.650.10 809 982 9.2E-32 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 6.7E-106 T 12-10-2018 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Gene3D G3DSA:3.90.650.10 420 606 1.1E-59 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF55326 221 428 4.53E-66 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Gene3D G3DSA:1.10.8.750 153 213 7.2E-28 T 12-10-2018 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF109736 155 220 1.19E-21 T 12-10-2018 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SMART SM01211 1041 1296 9.6E-158 T 12-10-2018 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF52317 1037 1295 2.29E-98 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Gene3D G3DSA:3.30.1330.10 614 808 3.9E-26 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.384 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_06430 e480f8ee246e40f415ddf92057b64bcc 1297 SUPERFAMILY SSF56042 432 615 2.54E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 Gene3D G3DSA:3.40.50.720 1 243 4.2E-83 T 12-10-2018 K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0051 T 12-10-2018 K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 3.5E-63 T 12-10-2018 K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.9E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 SUPERFAMILY SSF51735 2 242 2.42E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_48630 127ae77cee0f5243d9c291a24e3efb27 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 1.1E-55 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_26010 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:1.10.287.470 91 150 6.8E-69 T 12-10-2018 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 Pfam PF13533 Biotin-lipoyl like 62 103 2.2E-11 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:2.40.420.20 271 352 6.8E-69 T 12-10-2018 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 SUPERFAMILY SSF111369 50 265 6.93E-27 T 12-10-2018 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:2.40.50.100 57 189 6.8E-69 T 12-10-2018 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 Pfam PF13437 HlyD family secretion protein 155 253 6.0E-8 T 12-10-2018 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 7.6E-65 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 Gene3D G3DSA:2.40.30.170 48 270 6.8E-69 T 12-10-2018 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 361 2.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_11490 fbbd951bc6015b66a8a848b9a6d2bd90 365 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 2.4E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_41980 f036e0d69bb35846d7b31892ea372b08 189 SUPERFAMILY SSF101874 23 188 7.85E-50 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily K04M3_41980 f036e0d69bb35846d7b31892ea372b08 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.859 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI K04M3_41980 f036e0d69bb35846d7b31892ea372b08 189 Gene3D G3DSA:2.40.128.110 23 189 3.2E-49 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily K04M3_41980 f036e0d69bb35846d7b31892ea372b08 189 SMART SM00867 24 187 6.4E-62 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like K04M3_41980 f036e0d69bb35846d7b31892ea372b08 189 Pfam PF04264 YceI-like domain 25 184 2.6E-36 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 SUPERFAMILY SSF75620 12 355 2.62E-137 T 12-10-2018 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 SMART SM00937 67 180 2.3E-68 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.011 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 Pfam PF00472 RF-1 domain 218 323 9.9E-39 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 Pfam PF03462 PCRF domain 13 205 3.1E-77 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 Gene3D G3DSA:3.30.160.20 212 293 3.1E-95 T 12-10-2018 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 Gene3D G3DSA:1.20.58.410 3 98 8.6E-9 T 12-10-2018 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.1E-170 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 K04M3_07370 a0afc23df98ee1f9b2aa01f36537a4a4 362 Gene3D G3DSA:3.30.70.1660 115 343 3.1E-95 T 12-10-2018 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Gene3D G3DSA:3.40.50.620 108 454 4.6E-109 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 SUPERFAMILY SSF55190 2 96 3.4E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.6E-36 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 5.4E-200 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.187 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Gene3D G3DSA:3.30.1360.70 1 106 1.4E-33 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 6.9E-164 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 SMART SM01016 5 87 2.0E-28 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 SUPERFAMILY SSF47323 455 577 6.54E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Gene3D G3DSA:1.10.730.10 455 577 4.8E-36 T 12-10-2018 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 SMART SM00836 461 577 9.0E-42 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 SUPERFAMILY SSF52374 111 454 1.29E-93 T 12-10-2018 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_08550 1f5a9ee3b2ef93ee0f838122e6f915c5 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 K04M3_02130 8d7f0fe39e6d63fd3ca9d26c05857cb9 359 Pfam PF00953 Glycosyl transferase family 4 70 231 7.9E-31 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 K04M3_02130 8d7f0fe39e6d63fd3ca9d26c05857cb9 359 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 350 27.311 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 K04M3_02130 8d7f0fe39e6d63fd3ca9d26c05857cb9 359 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 5 347 3.7E-151 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 K04M3_15850 39a26b01bc591054125161d726424033 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 2.2E-19 T 12-10-2018 IPR021736 Protein of unknown function DUF3305 K04M3_05620 d51840ae36b7c960d722b5bd9ad50fc7 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 6.6E-97 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 K04M3_05620 d51840ae36b7c960d722b5bd9ad50fc7 378 Gene3D G3DSA:3.20.20.105 1 370 2.0E-174 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 K04M3_05620 d51840ae36b7c960d722b5bd9ad50fc7 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.525 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 K04M3_05620 d51840ae36b7c960d722b5bd9ad50fc7 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 4.0E-187 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 K04M3_05620 d51840ae36b7c960d722b5bd9ad50fc7 378 SUPERFAMILY SSF51713 3 366 1.96E-164 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 K04M3_05620 d51840ae36b7c960d722b5bd9ad50fc7 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 1.3E-178 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 Gene3D G3DSA:2.60.40.1180 555 649 2.3E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 Gene3D G3DSA:3.20.20.80 116 551 2.1E-143 T 12-10-2018 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 Pfam PF00128 Alpha amylase, catalytic domain 199 250 3.1E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 SUPERFAMILY SSF81296 7 123 1.85E-21 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 SUPERFAMILY SSF51445 112 542 1.88E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 1.5E-9 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 647 1.9E-203 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 SMART SM00642 151 535 3.1E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 SUPERFAMILY SSF51011 556 648 1.97E-13 T 12-10-2018 K04M3_33540 b21e621dd253d74b01a0b8879422e17b 663 Gene3D G3DSA:2.60.40.10 5 115 6.1E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_23640 3c68045255bb015601d6804a9dc53bd6 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 197 2.4E-77 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 K04M3_23640 3c68045255bb015601d6804a9dc53bd6 218 Gene3D G3DSA:3.40.50.170 8 218 1.4E-82 T 12-10-2018 K04M3_23640 3c68045255bb015601d6804a9dc53bd6 218 SUPERFAMILY SSF53328 8 204 5.23E-66 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_23640 3c68045255bb015601d6804a9dc53bd6 218 Pfam PF00551 Formyl transferase 7 186 9.2E-63 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_23640 3c68045255bb015601d6804a9dc53bd6 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 193 31.256 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 K04M3_23640 3c68045255bb015601d6804a9dc53bd6 218 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_22000 c4fc46a8803356e26c1ef9ccb0b0bc75 135 Pfam PF01641 SelR domain 14 132 1.7E-53 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 K04M3_22000 c4fc46a8803356e26c1ef9ccb0b0bc75 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 36.923 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 K04M3_22000 c4fc46a8803356e26c1ef9ccb0b0bc75 135 Gene3D G3DSA:2.170.150.20 2 135 3.8E-60 T 12-10-2018 K04M3_22000 c4fc46a8803356e26c1ef9ccb0b0bc75 135 SUPERFAMILY SSF51316 8 133 4.81E-58 T 12-10-2018 IPR011057 Mss4-like superfamily K04M3_22000 c4fc46a8803356e26c1ef9ccb0b0bc75 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 132 2.3E-56 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 K04M3_19370 9abd7a60d84fde1b559d74ee42008e8f 194 Gene3D G3DSA:3.40.630.30 14 191 1.3E-44 T 12-10-2018 K04M3_19370 9abd7a60d84fde1b559d74ee42008e8f 194 SUPERFAMILY SSF55729 14 185 2.51E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_19370 9abd7a60d84fde1b559d74ee42008e8f 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 2.7E-18 T 12-10-2018 IPR000182 GNAT domain K04M3_03200 98bc2628978824606d7b61c6033fe907 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 3.3E-21 T 12-10-2018 K04M3_03200 98bc2628978824606d7b61c6033fe907 330 Gene3D G3DSA:3.40.190.10 126 325 2.6E-117 T 12-10-2018 K04M3_03200 98bc2628978824606d7b61c6033fe907 330 Gene3D G3DSA:3.40.190.10 26 300 2.6E-117 T 12-10-2018 K04M3_03200 98bc2628978824606d7b61c6033fe907 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 3.3E-144 T 12-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 K04M3_03200 98bc2628978824606d7b61c6033fe907 330 SUPERFAMILY SSF53850 24 325 2.67E-68 T 12-10-2018 K04M3_03200 98bc2628978824606d7b61c6033fe907 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 1.9E-146 T 12-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 K04M3_52790 999ad4a252a8c42711bf8e147b64aceb 396 Pfam PF14072 DNA-sulfur modification-associated 35 362 5.8E-23 T 12-10-2018 IPR017642 DNA sulphur modification protein DndB K04M3_52790 999ad4a252a8c42711bf8e147b64aceb 396 TIGRFAM TIGR03187 DGQHR: DGQHR domain 33 313 9.4E-21 T 12-10-2018 IPR017601 DGQHR-containing domain K04M3_19160 4573274dc829885b17ced59c6e2e0ea8 225 Pfam PF07799 Protein of unknown function (DUF1643) 51 202 1.0E-4 T 12-10-2018 IPR012441 Protein of unknown function DUF1643 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 2.1E-16 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 SUPERFAMILY SSF51905 2 197 2.16E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 Gene3D G3DSA:3.50.50.60 3 361 1.4E-190 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 Gene3D G3DSA:3.50.50.60 115 461 1.4E-190 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 Gene3D G3DSA:3.40.250.10 471 563 1.7E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.9E-23 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.9E-23 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.9E-23 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.9E-23 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 1.9E-23 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 SMART SM00450 473 567 6.2E-14 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 SUPERFAMILY SSF52821 459 561 2.88E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 8.9E-21 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.9E-21 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 8.9E-21 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 8.9E-21 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 8.9E-21 T 12-10-2018 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 SUPERFAMILY SSF51905 155 340 3.08E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 Pfam PF00581 Rhodanese-like domain 483 560 6.1E-9 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 SUPERFAMILY SSF55424 344 467 6.19E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_40330 c06ebda944b5394f8450cdb80253695e 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 2.9E-54 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_28030 1ec7847d046e78a22ee229fc93fe952c 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.3E-34 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 K04M3_28030 1ec7847d046e78a22ee229fc93fe952c 95 SUPERFAMILY SSF69754 1 95 4.97E-35 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like K04M3_28030 1ec7847d046e78a22ee229fc93fe952c 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.5E-28 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 K04M3_28030 1ec7847d046e78a22ee229fc93fe952c 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-38 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like K04M3_23760 bdbfbb696e707419f4e6324244e362f6 248 Pfam PF08241 Methyltransferase domain 61 125 2.1E-9 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 K04M3_23760 bdbfbb696e707419f4e6324244e362f6 248 SUPERFAMILY SSF53335 73 212 2.22E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_23760 bdbfbb696e707419f4e6324244e362f6 248 Gene3D G3DSA:3.40.50.150 55 188 3.4E-15 T 12-10-2018 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 342 1.2E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 1.7E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 5.2E-13 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 SUPERFAMILY SSF63380 4 110 8.05E-27 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_11590 e126aa00363e3cc475d61538405689ed 351 SUPERFAMILY SSF52343 118 253 1.57E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_11590 e126aa00363e3cc475d61538405689ed 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 SUPERFAMILY SSF54292 242 350 2.1E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 K04M3_11590 e126aa00363e3cc475d61538405689ed 351 Gene3D G3DSA:3.40.50.80 115 258 4.5E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_11590 e126aa00363e3cc475d61538405689ed 351 Gene3D G3DSA:3.10.20.30 263 351 4.7E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_11590 e126aa00363e3cc475d61538405689ed 351 Gene3D G3DSA:2.40.30.10 5 109 5.4E-24 T 12-10-2018 K04M3_10080 20fa2b43953688b54c3db0ef5aff3982 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 224 9.7E-75 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 K04M3_10080 20fa2b43953688b54c3db0ef5aff3982 235 Gene3D G3DSA:3.40.630.70 63 235 1.6E-61 T 12-10-2018 K04M3_10080 20fa2b43953688b54c3db0ef5aff3982 235 SUPERFAMILY SSF55729 5 230 2.49E-86 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_10080 20fa2b43953688b54c3db0ef5aff3982 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 88.834 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 K04M3_10080 20fa2b43953688b54c3db0ef5aff3982 235 Gene3D G3DSA:2.30.210.20 5 62 9.2E-23 T 12-10-2018 K04M3_10080 20fa2b43953688b54c3db0ef5aff3982 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 204 2.1E-67 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.318 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.4E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.4E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.4E-15 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 1.0E-36 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 3.4E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 SUPERFAMILY SSF50249 6 83 3.9E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 Pfam PF00366 Ribosomal protein S17 10 77 1.1E-34 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02720 e5591bb82ebd4e6a3b8d81c487ceb208 84 Gene3D G3DSA:2.40.50.140 1 84 2.2E-38 T 12-10-2018 K04M3_18310 0212be9ba5ef57cad23264a3bf1a4877 221 SMART SM00507 156 216 3.3E-7 T 12-10-2018 IPR003615 HNH nuclease K04M3_18310 0212be9ba5ef57cad23264a3bf1a4877 221 Pfam PF01844 HNH endonuclease 169 220 1.4E-11 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 K04M3_52520 c74bf62b935d9bead086eb0a7dec036c 175 SMART SM00479 2 161 0.0011 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_52520 c74bf62b935d9bead086eb0a7dec036c 175 Gene3D G3DSA:3.30.420.10 1 166 8.2E-21 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_52520 c74bf62b935d9bead086eb0a7dec036c 175 SUPERFAMILY SSF53098 1 171 8.28E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_52520 c74bf62b935d9bead086eb0a7dec036c 175 Pfam PF00929 Exonuclease 4 146 3.4E-10 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 SUPERFAMILY SSF47384 111 188 8.24E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 SUPERFAMILY SSF55874 177 336 7.07E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 Gene3D G3DSA:3.30.450.20 7 130 2.3E-6 T 12-10-2018 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 Gene3D G3DSA:1.10.287.130 131 185 1.8E-44 T 12-10-2018 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 Pfam PF13188 PAS domain 18 69 3.1E-6 T 12-10-2018 IPR000014 PAS domain K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 SUPERFAMILY SSF55785 18 85 2.99E-6 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 Gene3D G3DSA:3.30.565.10 186 334 1.8E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 SMART SM00388 122 188 3.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 4.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 1.9E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 6.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 6.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 6.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 6.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22910 5d13c4d077ed853b67c4490f7a5b7d90 343 SMART SM00387 231 337 2.7E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 Gene3D G3DSA:1.20.1560.10 15 311 1.2E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 Pfam PF00005 ABC transporter 337 478 6.1E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 SUPERFAMILY SSF52540 319 516 3.74E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 Gene3D G3DSA:3.40.50.300 312 525 2.1E-22 T 12-10-2018 K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 Pfam PF00664 ABC transporter transmembrane region 16 282 2.1E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 SUPERFAMILY SSF90123 19 310 5.1E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_37440 d2bf2fd291295bdd1467b1f8a84331f5 528 SMART SM00382 341 520 9.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 Gene3D G3DSA:3.50.50.60 147 248 5.2E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.0E-36 T 12-10-2018 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.0E-36 T 12-10-2018 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.0E-36 T 12-10-2018 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.0E-36 T 12-10-2018 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.0E-36 T 12-10-2018 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 Gene3D G3DSA:1.10.1060.10 11 146 3.1E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 SUPERFAMILY SSF46548 6 157 1.2E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 2.1E-22 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 SUPERFAMILY SSF51971 145 399 1.65E-69 T 12-10-2018 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.6E-251 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 K04M3_04510 9ae630359a007bc99a2c03cc04d9c5de 470 Gene3D G3DSA:3.50.50.60 249 398 9.6E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_33470 b5f8c0ba039dbd10cf17be28039243c2 334 Gene3D G3DSA:2.60.120.10 196 329 6.2E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_33470 b5f8c0ba039dbd10cf17be28039243c2 334 SUPERFAMILY SSF51182 12 328 1.37E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_33470 b5f8c0ba039dbd10cf17be28039243c2 334 Gene3D G3DSA:2.60.120.10 48 144 8.8E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_37380 935879ca6c9509ff681b081565f083a5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site K04M3_37380 935879ca6c9509ff681b081565f083a5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 2.3E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37380 935879ca6c9509ff681b081565f083a5 69 SUPERFAMILY SSF50249 4 68 7.07E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_37380 935879ca6c9509ff681b081565f083a5 69 PIRSF PIRSF002599 1 69 4.6E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_37380 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37380 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37380 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37380 935879ca6c9509ff681b081565f083a5 69 Gene3D G3DSA:2.40.50.140 4 68 3.0E-28 T 12-10-2018 K04M3_37380 935879ca6c9509ff681b081565f083a5 69 SMART SM00357 6 69 4.2E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_37600 ed52d71ecd7f20d1670f19f12e6421f4 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 281 9.1E-27 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 K04M3_37600 ed52d71ecd7f20d1670f19f12e6421f4 297 Pfam PF01545 Cation efflux family 13 214 2.4E-31 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 K04M3_37600 ed52d71ecd7f20d1670f19f12e6421f4 297 Gene3D G3DSA:1.20.1510.10 9 214 2.1E-19 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily K04M3_37600 ed52d71ecd7f20d1670f19f12e6421f4 297 SUPERFAMILY SSF161111 7 214 7.45E-32 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82866 808 1031 4.32E-48 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.70.1430 55 820 6.4E-259 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82866 307 506 5.36E-33 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82714 199 282 2.49E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.70.1430 572 670 6.4E-259 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:1.20.1640.10 25 520 6.4E-259 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Pfam PF00873 AcrB/AcrD/AcrF family 19 1028 3.1E-173 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82714 729 803 2.09E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:1.20.1640.10 521 1024 6.4E-259 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.70.1320 151 343 6.4E-259 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82693 151 338 5.75E-18 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.2090.10 722 812 6.4E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.2090.10 194 286 6.4E-259 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 Gene3D G3DSA:3.30.70.1440 671 872 6.4E-259 T 12-10-2018 K04M3_11500 eae6e5185539eb22529ab0363875a826 1036 SUPERFAMILY SSF82693 55 150 4.88E-23 T 12-10-2018 K04M3_02520 b49807ec9cecca3fe737be7699cf82dc 319 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 319 157.795 T 12-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 K04M3_02520 b49807ec9cecca3fe737be7699cf82dc 319 Gene3D G3DSA:1.10.4200.10 148 309 3.0E-9 T 12-10-2018 K04M3_02520 b49807ec9cecca3fe737be7699cf82dc 319 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 36 304 3.3E-80 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 K04M3_02520 b49807ec9cecca3fe737be7699cf82dc 319 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 34 305 4.3E-104 T 12-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 Pfam PF02119 Flagellar P-ring protein 31 372 2.2E-135 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 170 188 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 196 214 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 PRINTS PR01010 Flagellar P-ring protein signature 260 272 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_47120 b57cd2bda45cf122f69913f010e0425f 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 8 373 36.821 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_43390 860a89ee15b50da1e96aec7cf3c8c617 243 Gene3D G3DSA:3.40.50.1580 1 243 4.0E-77 T 12-10-2018 K04M3_43390 860a89ee15b50da1e96aec7cf3c8c617 243 SUPERFAMILY SSF53167 4 220 1.57E-67 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 K04M3_43390 860a89ee15b50da1e96aec7cf3c8c617 243 Pfam PF01048 Phosphorylase superfamily 17 200 1.4E-34 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 Pfam PF00005 ABC transporter 304 455 1.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 SUPERFAMILY SSF52540 6 256 3.44E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 Gene3D G3DSA:3.40.50.300 281 535 1.2E-67 T 12-10-2018 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 Gene3D G3DSA:3.40.50.300 4 280 2.3E-81 T 12-10-2018 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0054 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 266 8.6E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 SMART SM00382 312 504 7.6E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 SMART SM00382 35 235 2.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 SUPERFAMILY SSF52540 295 526 4.96E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_34970 f92c7f733c3df96d9ecafb0b9926de1d 543 Pfam PF00005 ABC transporter 26 185 2.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 Gene3D G3DSA:3.30.413.10 262 361 8.2E-25 T 12-10-2018 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 SUPERFAMILY SSF56014 265 354 2.43E-11 T 12-10-2018 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.5E-126 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 PIRSF PIRSF004640 1 364 2.1E-147 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.139 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 Pfam PF04551 GcpE protein 14 354 4.0E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 SUPERFAMILY SSF51717 15 207 5.73E-11 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_05820 5c25baa054e70ccb4efe6d22d6479386 372 Gene3D G3DSA:3.20.20.20 1 261 3.5E-104 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_35640 e0ee288b7bec9e400fd5b4b308ac52aa 438 Gene3D G3DSA:3.30.9.10 125 353 5.3E-43 T 12-10-2018 K04M3_35640 e0ee288b7bec9e400fd5b4b308ac52aa 438 SUPERFAMILY SSF51905 32 397 2.2E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35640 e0ee288b7bec9e400fd5b4b308ac52aa 438 Pfam PF01266 FAD dependent oxidoreductase 33 390 1.0E-33 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_35640 e0ee288b7bec9e400fd5b4b308ac52aa 438 Gene3D G3DSA:3.50.50.60 33 392 5.3E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 Gene3D G3DSA:3.90.470.20 1 126 4.6E-41 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 7.6E-43 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 4.4E-31 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.143 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 8.3E-23 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 SUPERFAMILY SSF56214 3 125 7.46E-31 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 K04M3_26820 6a82740ef9070979397ea8ca41dee161 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 7.0E-36 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 633 1.3E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 SMART SM00283 406 667 2.2E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 SUPERFAMILY SSF58104 364 668 6.15E-61 T 12-10-2018 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 1.1E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 1.1E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 1.1E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_15660 8017f44f22378307eceecd5ff9ed1ea7 672 Gene3D G3DSA:1.10.287.950 341 669 2.0E-60 T 12-10-2018 K04M3_05120 e4d470cf257198fd2c012c25f64029fc 370 Gene3D G3DSA:3.30.420.40 12 364 3.4E-131 T 12-10-2018 K04M3_05120 e4d470cf257198fd2c012c25f64029fc 370 Gene3D G3DSA:3.30.420.40 146 329 3.4E-131 T 12-10-2018 K04M3_05120 e4d470cf257198fd2c012c25f64029fc 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 8.8E-167 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 K04M3_05120 e4d470cf257198fd2c012c25f64029fc 370 SUPERFAMILY SSF53067 6 343 5.98E-30 T 12-10-2018 K04M3_05120 e4d470cf257198fd2c012c25f64029fc 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.439 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 K04M3_19750 05c2332a3d8a3cbdc247e56e0706ebee 520 SUPERFAMILY SSF53955 243 314 7.87E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_19750 05c2332a3d8a3cbdc247e56e0706ebee 520 Pfam PF01471 Putative peptidoglycan binding domain 229 267 3.5E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like K04M3_19750 05c2332a3d8a3cbdc247e56e0706ebee 520 SUPERFAMILY SSF141523 294 455 6.15E-19 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like K04M3_19750 05c2332a3d8a3cbdc247e56e0706ebee 520 Pfam PF03734 L,D-transpeptidase catalytic domain 295 461 1.7E-29 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 K04M3_39250 fe58e47ced24be35316f7c3c5e63c381 334 SUPERFAMILY SSF53383 1 332 2.58E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_39250 fe58e47ced24be35316f7c3c5e63c381 334 Pfam PF01212 Beta-eliminating lyase 2 283 1.9E-100 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 K04M3_39250 fe58e47ced24be35316f7c3c5e63c381 334 PIRSF PIRSF017617 1 334 7.1E-133 T 12-10-2018 IPR023603 Threonine aldolase K04M3_39250 fe58e47ced24be35316f7c3c5e63c381 334 Gene3D G3DSA:3.40.640.10 1 243 5.7E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_39250 fe58e47ced24be35316f7c3c5e63c381 334 Gene3D G3DSA:3.90.1150.10 244 334 6.3E-24 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_18060 db0cdd382f81e12308fe35f87ae29dc0 173 SUPERFAMILY SSF55729 9 132 1.47E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_18060 db0cdd382f81e12308fe35f87ae29dc0 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 124 2.2E-10 T 12-10-2018 K04M3_18060 db0cdd382f81e12308fe35f87ae29dc0 173 Gene3D G3DSA:3.40.630.30 1 161 1.8E-22 T 12-10-2018 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 SUPERFAMILY SSF47384 192 271 2.16E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Gene3D G3DSA:1.10.287.130 202 272 2.0E-20 T 12-10-2018 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 SMART SM00387 317 429 2.6E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.5E-31 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 1.0E-5 T 12-10-2018 IPR000014 PAS domain K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Gene3D G3DSA:3.30.565.10 279 429 1.9E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 SMART SM00388 205 272 8.9E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Gene3D G3DSA:3.30.450.20 85 201 5.8E-10 T 12-10-2018 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 SMART SM00091 98 166 7.2E-6 T 12-10-2018 IPR000014 PAS domain K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 3.6E-139 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 SUPERFAMILY SSF55874 261 426 1.7E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 428 9.6E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 SUPERFAMILY SSF55785 86 196 1.92E-11 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_05450 99a752cdf26c37d1509da47deb5b377b 432 Pfam PF00989 PAS fold 99 165 1.0E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_39280 8ba5adfb2a27b2e202cecee9b97e7965 484 SUPERFAMILY SSF53300 318 475 1.41E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_39280 8ba5adfb2a27b2e202cecee9b97e7965 484 Gene3D G3DSA:3.40.50.410 322 468 1.0E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_39280 8ba5adfb2a27b2e202cecee9b97e7965 484 Pfam PF05762 VWA domain containing CoxE-like protein 318 447 2.1E-11 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Gene3D G3DSA:3.30.460.10 1 121 9.8E-29 T 12-10-2018 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.155 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.7E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 PIRSF PIRSF000813 1 406 3.0E-203 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Gene3D G3DSA:1.10.3090.10 122 404 4.6E-45 T 12-10-2018 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 SUPERFAMILY SSF81891 120 401 2.49E-55 T 12-10-2018 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Pfam PF01743 Poly A polymerase head domain 3 122 3.3E-20 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Pfam PF01966 HD domain 229 326 7.7E-9 T 12-10-2018 IPR006674 HD domain K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 SUPERFAMILY SSF81301 2 119 5.23E-31 T 12-10-2018 K04M3_03850 ea0eae7e4d58d8ee24760cdafe7912a1 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.213 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 SUPERFAMILY SSF54862 28 144 6.17E-14 T 12-10-2018 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 PIRSF PIRSF000371 1 292 8.9E-90 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 1.7E-122 T 12-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW K04M3_14990 3585d049e63aa8fde10326fec93da097 293 Pfam PF13353 4Fe-4S single cluster domain 21 145 3.7E-8 T 12-10-2018 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 Gene3D G3DSA:3.20.20.70 64 281 5.5E-32 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 Gene3D G3DSA:3.20.20.70 7 63 1.1E-11 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 K04M3_14990 3585d049e63aa8fde10326fec93da097 293 Pfam PF04055 Radical SAM superfamily 29 224 6.5E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_31870 51dd6756df170707b72144c6cac65131 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 6.7E-131 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PIRSF PIRSF000166 2 305 3.7E-129 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.926 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 Gene3D G3DSA:3.40.1500.10 1 305 8.1E-137 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PRINTS PR00073 Coprogen oxidase signature 129 151 1.1E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PRINTS PR00073 Coprogen oxidase signature 266 292 1.1E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PRINTS PR00073 Coprogen oxidase signature 31 47 1.1E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PRINTS PR00073 Coprogen oxidase signature 238 265 1.1E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PRINTS PR00073 Coprogen oxidase signature 94 118 1.1E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 PRINTS PR00073 Coprogen oxidase signature 166 195 1.1E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31870 51dd6756df170707b72144c6cac65131 305 SUPERFAMILY SSF102886 5 305 1.44E-137 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.2E-22 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 12-10-2018 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 12-10-2018 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 12-10-2018 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_31460 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 Pfam PF00293 NUDIX domain 7 145 6.3E-27 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 Gene3D G3DSA:3.90.79.10 1 159 7.8E-51 T 12-10-2018 K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 SUPERFAMILY SSF55811 6 152 8.39E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_04890 09b073b4ddda45747fd25fd130d80866 173 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 12-10-2018 K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 SUPERFAMILY SSF50447 1 208 3.44E-84 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Pfam PF00297 Ribosomal protein L3 93 182 2.1E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.2E-95 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 12-10-2018 K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site K04M3_02630 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.199 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_07020 ba71374bac692c2555e2c91782fd9e7d 179 Pfam PF04390 Lipopolysaccharide-assembly 40 159 1.9E-12 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 K04M3_07020 ba71374bac692c2555e2c91782fd9e7d 179 Gene3D G3DSA:3.30.160.150 19 168 4.4E-49 T 12-10-2018 K04M3_07020 ba71374bac692c2555e2c91782fd9e7d 179 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.798 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 K04M3_15580 88f082f1561a4c753f78a9efeb9d8948 456 Pfam PF01554 MatE 243 404 5.6E-39 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_15580 88f082f1561a4c753f78a9efeb9d8948 456 Pfam PF01554 MatE 17 176 9.8E-37 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_15580 88f082f1561a4c753f78a9efeb9d8948 456 PIRSF PIRSF006603 5 452 3.0E-63 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_15580 88f082f1561a4c753f78a9efeb9d8948 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 5.9E-124 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_19830 763181762b95f73491626db6aa0aa6c6 177 SUPERFAMILY SSF52833 44 172 1.94E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_19830 763181762b95f73491626db6aa0aa6c6 177 Pfam PF08534 Redoxin 65 158 2.4E-12 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 K04M3_19830 763181762b95f73491626db6aa0aa6c6 177 Gene3D G3DSA:3.40.30.10 21 174 7.4E-30 T 12-10-2018 K04M3_19830 763181762b95f73491626db6aa0aa6c6 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 42 169 6.2E-41 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 K04M3_38180 dddb0ffde41e09fec3ad659c9d9150f0 302 Pfam PF00682 HMGL-like 5 275 3.6E-51 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 K04M3_38180 dddb0ffde41e09fec3ad659c9d9150f0 302 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 231 240 - T 12-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 K04M3_38180 dddb0ffde41e09fec3ad659c9d9150f0 302 SUPERFAMILY SSF51569 2 296 3.11E-72 T 12-10-2018 K04M3_38180 dddb0ffde41e09fec3ad659c9d9150f0 302 Gene3D G3DSA:3.20.20.70 1 298 5.1E-129 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Pfam PF02272 DHHA1 domain 722 854 4.1E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.824 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 SUPERFAMILY SSF101353 255 463 1.7E-60 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Gene3D G3DSA:3.30.930.10 2 251 3.3E-120 T 12-10-2018 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 SUPERFAMILY SSF55186 551 710 5.1E-54 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Gene3D G3DSA:3.30.54.20 623 676 1.2E-51 T 12-10-2018 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Gene3D G3DSA:2.40.30.130 458 551 9.0E-10 T 12-10-2018 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 SMART SM00863 652 695 3.9E-22 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 SUPERFAMILY SSF55681 3 254 1.49E-108 T 12-10-2018 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Gene3D G3DSA:3.30.980.10 562 696 1.2E-51 T 12-10-2018 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 4.2E-225 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 Gene3D G3DSA:3.10.310.40 749 857 3.9E-34 T 12-10-2018 K04M3_26620 57899f064a37a266c16a4b3704be74dc 860 SUPERFAMILY SSF50447 454 551 6.71E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:3.40.50.10490 13 507 3.1E-242 T 12-10-2018 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:3.40.50.10490 99 292 3.1E-242 T 12-10-2018 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 Gene3D G3DSA:1.10.1390.10 508 550 4.6E-20 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 SUPERFAMILY SSF53697 6 548 2.56E-226 T 12-10-2018 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 Pfam PF00342 Phosphoglucose isomerase 53 542 2.3E-255 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_28710 32eed219a154c22fe96c1a3e5b5a64c3 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.206 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_18390 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Gene3D G3DSA:1.10.10.60 4 46 5.0E-7 T 12-10-2018 K04M3_18390 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Pfam PF00665 Integrase core domain 175 279 7.2E-12 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_18390 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Gene3D G3DSA:3.30.420.10 173 322 2.6E-14 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_18390 6b3ecba4620b1aa1c3775f6c88e9e58d 323 SUPERFAMILY SSF53098 175 320 6.07E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_18390 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-14 T 12-10-2018 IPR025246 Transposase IS30-like HTH domain K04M3_18390 6b3ecba4620b1aa1c3775f6c88e9e58d 323 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 12-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 K04M3_19150 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Gene3D G3DSA:1.10.10.60 4 46 5.0E-7 T 12-10-2018 K04M3_19150 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Pfam PF00665 Integrase core domain 175 279 7.2E-12 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_19150 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Gene3D G3DSA:3.30.420.10 173 322 2.6E-14 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_19150 6b3ecba4620b1aa1c3775f6c88e9e58d 323 SUPERFAMILY SSF53098 175 320 6.07E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_19150 6b3ecba4620b1aa1c3775f6c88e9e58d 323 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-14 T 12-10-2018 IPR025246 Transposase IS30-like HTH domain K04M3_19150 6b3ecba4620b1aa1c3775f6c88e9e58d 323 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 12-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 K04M3_09220 c624878b21b76f2b5eb38f85116c883e 404 Pfam PF00155 Aminotransferase class I and II 61 390 2.1E-48 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_09220 c624878b21b76f2b5eb38f85116c883e 404 SUPERFAMILY SSF53383 5 400 6.8E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_09220 c624878b21b76f2b5eb38f85116c883e 404 Gene3D G3DSA:3.40.640.10 53 294 1.5E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_09220 c624878b21b76f2b5eb38f85116c883e 404 Gene3D G3DSA:3.90.1150.10 21 398 1.5E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Pfam PF04480 Protein of unknown function (DUF559) 1643 1732 2.3E-4 T 12-10-2018 IPR007569 Protein of unknown function DUF559 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Pfam PF13195 Protein of unknown function (DUF4011) 395 568 3.6E-38 T 12-10-2018 IPR025103 Protein of unknown function DUF4011 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Pfam PF13086 AAA domain 1240 1368 7.4E-9 T 12-10-2018 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Pfam PF13087 AAA domain 1397 1584 2.6E-17 T 12-10-2018 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 SUPERFAMILY SSF52980 1627 1737 4.45E-15 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Gene3D G3DSA:3.40.960.10 1631 1736 2.4E-16 T 12-10-2018 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Gene3D G3DSA:3.40.50.300 1111 1401 1.9E-15 T 12-10-2018 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Gene3D G3DSA:3.40.50.300 616 833 3.1E-17 T 12-10-2018 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 Gene3D G3DSA:3.40.50.300 1406 1618 2.4E-29 T 12-10-2018 K04M3_43950 272538ff6aa7b52225f9a549872345bd 1987 SUPERFAMILY SSF52540 681 1613 1.76E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:3.40.50.80 275 393 3.6E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 5.1E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 5.1E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 5.1E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 5.1E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 5.1E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF52343 258 402 4.32E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 3.1E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 9.4E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:3.10.20.30 34 125 1.4E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 PIRSF PIRSF000044 1 407 8.3E-219 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 42 115 2.4E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF54292 35 124 2.42E-21 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF63380 105 272 6.81E-36 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 3.9E-228 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 K04M3_24660 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:2.40.30.10 126 264 1.9E-53 T 12-10-2018 K04M3_32170 b951ceb764c8718aa9a38c361b9a977d 401 SUPERFAMILY SSF103473 5 377 4.71E-52 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_32170 b951ceb764c8718aa9a38c361b9a977d 401 Pfam PF07690 Major Facilitator Superfamily 13 338 9.4E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_32170 b951ceb764c8718aa9a38c361b9a977d 401 Gene3D G3DSA:1.20.1720.10 8 377 5.4E-72 T 12-10-2018 K04M3_32170 b951ceb764c8718aa9a38c361b9a977d 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 2.0E-81 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 K04M3_41520 ecc5b31937bdd0fdad75c81adcb2c3be 117 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 1.1E-72 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 K04M3_41010 ecc5b31937bdd0fdad75c81adcb2c3be 117 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 1.1E-72 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 K04M3_41140 ecc5b31937bdd0fdad75c81adcb2c3be 117 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 1.1E-72 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 K04M3_39270 fb10e56e1613e160902319727e9fbf6d 553 Gene3D G3DSA:3.40.50.300 8 228 5.3E-60 T 12-10-2018 K04M3_39270 fb10e56e1613e160902319727e9fbf6d 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 1.9E-19 T 12-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 K04M3_39270 fb10e56e1613e160902319727e9fbf6d 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.9E-22 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 K04M3_39270 fb10e56e1613e160902319727e9fbf6d 553 SUPERFAMILY SSF52540 18 293 2.57E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39270 fb10e56e1613e160902319727e9fbf6d 553 SMART SM00382 46 189 1.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_39270 fb10e56e1613e160902319727e9fbf6d 553 Gene3D G3DSA:1.10.8.300 229 301 1.2E-25 T 12-10-2018 K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 SUPERFAMILY SSF55073 165 319 9.42E-40 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 SMART SM00267 149 318 9.3E-49 T 12-10-2018 IPR000160 GGDEF domain K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 Gene3D G3DSA:3.30.70.270 154 322 4.6E-49 T 12-10-2018 K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 SMART SM00086 106 149 3.3E-5 T 12-10-2018 IPR001610 PAC motif K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 Gene3D G3DSA:2.10.70.100 104 151 3.8E-12 T 12-10-2018 K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 Pfam PF08447 PAS fold 57 143 8.4E-21 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 49 156 4.1E-12 T 12-10-2018 IPR000014 PAS domain K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 313 4.9E-40 T 12-10-2018 IPR000160 GGDEF domain K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 SUPERFAMILY SSF55785 49 151 1.93E-18 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 Gene3D G3DSA:3.30.450.20 24 100 5.3E-13 T 12-10-2018 K04M3_40000 d02c0eb10717fe68b5d50dd3a542fc59 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 317 4.4E-36 T 12-10-2018 IPR000160 GGDEF domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 575 1.2E-48 T 12-10-2018 IPR000160 GGDEF domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 Gene3D G3DSA:3.30.450.20 143 259 2.0E-5 T 12-10-2018 K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 SUPERFAMILY SSF55073 417 577 8.63E-46 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 Pfam PF13188 PAS domain 40 91 6.2E-4 T 12-10-2018 IPR000014 PAS domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 SUPERFAMILY SSF55785 266 392 1.01E-18 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 SMART SM00267 401 577 3.9E-60 T 12-10-2018 IPR000160 GGDEF domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 6.9E-15 T 12-10-2018 IPR000014 PAS domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 Gene3D G3DSA:3.30.70.270 414 580 2.6E-51 T 12-10-2018 K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 Pfam PF08448 PAS fold 285 395 5.6E-14 T 12-10-2018 IPR013656 PAS fold-4 K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 5.4E-49 T 12-10-2018 IPR000160 GGDEF domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 SMART SM00091 279 346 0.013 T 12-10-2018 IPR000014 PAS domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 SMART SM00091 158 227 12.0 T 12-10-2018 IPR000014 PAS domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 SMART SM00091 38 104 23.0 T 12-10-2018 IPR000014 PAS domain K04M3_04560 c30e1cffda847cc4dcf4aa7e7c5ecefa 581 Gene3D G3DSA:3.30.450.20 264 407 9.0E-24 T 12-10-2018 K04M3_10780 496707d68572cd282fc9c92632f72ebe 398 Pfam PF13679 Methyltransferase domain 108 230 8.9E-18 T 12-10-2018 IPR025714 Methyltransferase domain K04M3_10780 496707d68572cd282fc9c92632f72ebe 398 SUPERFAMILY SSF53335 121 202 4.82E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_45750 9b07defc1224f703b840ff2af8534961 310 Gene3D G3DSA:3.30.360.10 119 310 6.0E-56 T 12-10-2018 K04M3_45750 9b07defc1224f703b840ff2af8534961 310 SUPERFAMILY SSF51735 1 166 2.41E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_45750 9b07defc1224f703b840ff2af8534961 310 Gene3D G3DSA:3.40.50.720 1 118 1.5E-28 T 12-10-2018 K04M3_45750 9b07defc1224f703b840ff2af8534961 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 3.1E-16 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 K04M3_45750 9b07defc1224f703b840ff2af8534961 310 SUPERFAMILY SSF55347 121 264 6.87E-49 T 12-10-2018 K04M3_06830 40ad0cefc653631103d064199d7298d7 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_06830 40ad0cefc653631103d064199d7298d7 344 Gene3D G3DSA:3.40.50.300 1 232 1.5E-74 T 12-10-2018 K04M3_06830 40ad0cefc653631103d064199d7298d7 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 8.4E-198 T 12-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 K04M3_06830 40ad0cefc653631103d064199d7298d7 344 SMART SM00930 265 340 1.8E-28 T 12-10-2018 IPR018449 NIL domain K04M3_06830 40ad0cefc653631103d064199d7298d7 344 SUPERFAMILY SSF55021 248 343 1.26E-26 T 12-10-2018 K04M3_06830 40ad0cefc653631103d064199d7298d7 344 Pfam PF00005 ABC transporter 21 169 2.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_06830 40ad0cefc653631103d064199d7298d7 344 Pfam PF09383 NIL domain 268 339 1.5E-21 T 12-10-2018 IPR018449 NIL domain K04M3_06830 40ad0cefc653631103d064199d7298d7 344 SMART SM00382 30 235 8.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_06830 40ad0cefc653631103d064199d7298d7 344 SUPERFAMILY SSF52540 1 239 9.98E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_06830 40ad0cefc653631103d064199d7298d7 344 Gene3D G3DSA:3.30.70.260 244 344 9.9E-41 T 12-10-2018 K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 SMART SM00344 19 128 2.1E-43 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 SUPERFAMILY SSF54909 79 168 1.97E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 Gene3D G3DSA:1.10.10.10 20 71 4.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 66 1.2E-16 T 12-10-2018 K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 Pfam PF01037 Lrp/AsnC ligand binding domain 86 158 2.2E-19 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 ProSitePatterns PS00519 AsnC-type HTH domain signature. 37 63 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 Gene3D G3DSA:3.30.70.920 72 156 5.3E-20 T 12-10-2018 K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 SUPERFAMILY SSF46785 14 107 2.62E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 46 6.6E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 35 6.6E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_09450 dd18dd5ea90aebe90f3356751ba44c42 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 46 65 6.6E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 728 5.8E-158 T 12-10-2018 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 SUPERFAMILY SSF56601 343 776 1.24E-109 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 PIRSF PIRSF002799 13 790 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 4.2E-27 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:1.10.3810.10 182 385 3.5E-262 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 691 1.9E-23 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:3.30.2060.10 92 181 3.5E-262 T 12-10-2018 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 Pfam PF00912 Transglycosylase 190 360 2.0E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 Gene3D G3DSA:3.40.710.10 84 741 3.5E-262 T 12-10-2018 K04M3_26050 1655d70fcfbebed791a84f3fcd43ede1 790 SUPERFAMILY SSF53955 190 383 4.22E-69 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 PIRSF PIRSF000521 172 402 1.8E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 PIRSF PIRSF000521 25 155 3.5E-7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.42 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 SUPERFAMILY SSF53383 16 399 5.11E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 1.9E-150 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 Gene3D G3DSA:3.90.1150.10 25 392 9.6E-152 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 Gene3D G3DSA:3.40.640.10 59 304 9.6E-152 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.5E-207 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 K04M3_29350 2784c40aad95ce9d679582ade446b2f0 403 Pfam PF00202 Aminotransferase class-III 22 399 2.2E-128 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_01610 abf34a41ed96ef04eec718faa73bc8f9 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.4E-118 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 K04M3_01610 abf34a41ed96ef04eec718faa73bc8f9 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 K04M3_01610 abf34a41ed96ef04eec718faa73bc8f9 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 9.2E-44 T 12-10-2018 IPR013527 YicC-like, N-terminal K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 5.0E-131 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 Gene3D G3DSA:1.10.1040.10 165 298 2.1E-44 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 Gene3D G3DSA:3.40.50.720 1 164 9.0E-58 T 12-10-2018 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 PIRSF PIRSF000103 1 298 4.7E-83 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 6.1E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 2.2E-52 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 SUPERFAMILY SSF51735 3 163 8.45E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_43740 de78c2375b43b2b0d5f893d83d80e0c9 298 SUPERFAMILY SSF48179 163 295 4.76E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 SMART SM00382 279 480 1.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 Gene3D G3DSA:3.40.50.300 239 471 3.2E-41 T 12-10-2018 K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 SUPERFAMILY SSF52540 41 208 1.22E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 Pfam PF00005 ABC transporter 271 422 6.8E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 SUPERFAMILY SSF52540 238 456 7.23E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 Gene3D G3DSA:3.40.50.300 9 238 2.7E-25 T 12-10-2018 K04M3_37870 e548a3d27c60012a1459625790f5c65e 484 Pfam PF00005 ABC transporter 40 159 1.6E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_28700 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain K04M3_28700 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_28700 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_38460 f6a286e3f1f3e500304442aafa3c3111 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_38460 f6a286e3f1f3e500304442aafa3c3111 242 PIRSF PIRSF039085 1 242 5.3E-93 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 K04M3_38460 f6a286e3f1f3e500304442aafa3c3111 242 Pfam PF00005 ABC transporter 18 170 3.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_38460 f6a286e3f1f3e500304442aafa3c3111 242 Gene3D G3DSA:3.40.50.300 1 241 1.5E-71 T 12-10-2018 K04M3_38460 f6a286e3f1f3e500304442aafa3c3111 242 SMART SM00382 27 218 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_38460 f6a286e3f1f3e500304442aafa3c3111 242 SUPERFAMILY SSF52540 3 233 6.44E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01420 3c2a38b5e8257be9b257875d48990a47 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 9.3E-127 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 K04M3_01420 3c2a38b5e8257be9b257875d48990a47 462 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 6.2E-131 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 K04M3_01420 3c2a38b5e8257be9b257875d48990a47 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 K04M3_01420 3c2a38b5e8257be9b257875d48990a47 462 Pfam PF00860 Permease family 22 414 1.1E-97 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 Gene3D G3DSA:1.10.287.680 1 53 1.9E-32 T 12-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 PIRSF PIRSF006272 1 166 1.5E-79 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-91 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 Pfam PF03887 YfbU domain 1 166 8.2E-71 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.446 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 SUPERFAMILY SSF116960 1 166 2.75E-66 T 12-10-2018 K04M3_09810 82e19068cad37fc12b9eb015986e87fd 166 Gene3D G3DSA:1.10.3190.10 54 166 1.6E-37 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03780 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 SMART SM00926 72 154 2.0E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 Gene3D G3DSA:2.40.40.20 858 1004 5.3E-23 T 12-10-2018 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 Gene3D G3DSA:3.40.50.740 566 708 1.4E-11 T 12-10-2018 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 695 7.9E-22 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 SUPERFAMILY SSF53706 69 882 1.33E-115 T 12-10-2018 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 Gene3D G3DSA:3.40.50.740 157 187 3.1E-5 T 12-10-2018 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 9.5E-11 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_20720 9492aa080c935ca66b0d7f690e4e8395 1030 SUPERFAMILY SSF50692 881 1003 7.23E-22 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 SUPERFAMILY SSF55681 104 464 2.49E-95 T 12-10-2018 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.1E-81 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.707 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.2E-206 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 Gene3D G3DSA:2.40.50.140 3 106 1.2E-19 T 12-10-2018 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.1E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.1E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.1E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.1E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.4E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 Gene3D G3DSA:3.30.930.10 109 465 4.5E-109 T 12-10-2018 K04M3_19540 c83e3d31810aa270ae1d78988f48be51 466 SUPERFAMILY SSF50249 16 101 4.38E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 SUPERFAMILY SSF52540 73 362 5.57E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 SMART SM00487 20 223 3.4E-53 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 Gene3D G3DSA:3.40.50.300 214 428 1.6E-51 T 12-10-2018 K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 Pfam PF00270 DEAD/DEAH box helicase 25 196 3.3E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 SMART SM00490 260 341 7.5E-31 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 Gene3D G3DSA:3.40.50.300 1 212 9.3E-73 T 12-10-2018 K04M3_35240 b50fdcc9603dd5dd8e44c8d65cb02fa3 443 Pfam PF00271 Helicase conserved C-terminal domain 235 341 6.4E-30 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_30030 4bf40d65a1b9405c5dab5bc23c40e696 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.857 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 K04M3_30030 4bf40d65a1b9405c5dab5bc23c40e696 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 3.6E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 K04M3_30030 4bf40d65a1b9405c5dab5bc23c40e696 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 2.0E-59 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 K04M3_30030 4bf40d65a1b9405c5dab5bc23c40e696 159 SUPERFAMILY SSF75217 2 157 2.22E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_30030 4bf40d65a1b9405c5dab5bc23c40e696 159 PIRSF PIRSF029256 1 159 5.1E-67 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 K04M3_30030 4bf40d65a1b9405c5dab5bc23c40e696 159 Gene3D G3DSA:3.40.1280.10 1 159 1.9E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_46860 aa1ad287cfbe391e4aef8b0ce486e529 297 Pfam PF00892 EamA-like transporter family 9 136 3.5E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_46860 aa1ad287cfbe391e4aef8b0ce486e529 297 Pfam PF00892 EamA-like transporter family 150 281 4.4E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_46860 aa1ad287cfbe391e4aef8b0ce486e529 297 SUPERFAMILY SSF103481 39 137 2.75E-15 T 12-10-2018 K04M3_46860 aa1ad287cfbe391e4aef8b0ce486e529 297 SUPERFAMILY SSF103481 187 283 2.48E-16 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.0E-28 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:1.10.132.30 641 790 6.3E-66 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.0E-76 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.0E-28 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 948 1021 1.2E-21 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:1.10.274.100 490 640 2.4E-40 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.985 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 3.5E-64 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Gene3D G3DSA:2.40.50.100 1151 1214 3.5E-64 T 12-10-2018 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 SMART SM00663 235 514 1.1E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.7E-87 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.0E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30520 e3df13fedd68104b820be13795d1b652 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.2E-27 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:3.30.70.1430 578 679 4.4E-303 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:1.20.1640.10 10 523 4.4E-303 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82866 299 499 3.92E-48 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.6E-92 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:3.30.2090.10 181 278 4.4E-303 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82866 842 1037 2.35E-42 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:3.30.70.1430 40 828 4.4E-303 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Pfam PF00873 AcrB/AcrD/AcrF family 4 1037 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82693 41 134 6.8E-26 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82693 576 682 1.29E-25 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:1.20.1640.10 524 1034 4.4E-303 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:3.30.70.1320 135 335 4.4E-303 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1042 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82693 683 868 1.52E-23 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82693 138 333 9.59E-27 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82714 733 816 4.58E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:3.30.70.1440 680 877 4.4E-303 T 12-10-2018 K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 SUPERFAMILY SSF82714 185 274 6.67E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_16910 60b9b687aaceb1310ebcc8fe5f8237dd 1046 Gene3D G3DSA:3.30.2090.10 732 820 4.4E-303 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.2E-47 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 SMART SM00852 184 321 1.0E-41 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Gene3D G3DSA:2.170.190.11 53 145 1.9E-146 T 12-10-2018 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 SUPERFAMILY SSF53218 181 327 1.09E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 3.3E-25 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 SUPERFAMILY SSF63867 332 410 5.1E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Gene3D G3DSA:2.40.340.10 332 401 1.9E-146 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Gene3D G3DSA:3.40.980.10 179 331 1.9E-146 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 SUPERFAMILY SSF63882 7 180 8.76E-57 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Gene3D G3DSA:3.90.105.10 31 178 1.9E-146 T 12-10-2018 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 1.2E-21 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.8E-33 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_44830 9cfc69d24d89306bdd5920f05521d671 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 K04M3_30060 399898e9ed1aa938ab05a33a31ccb470 435 PIRSF PIRSF004539 1 435 5.6E-177 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 K04M3_30060 399898e9ed1aa938ab05a33a31ccb470 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 1.9E-179 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 K04M3_30060 399898e9ed1aa938ab05a33a31ccb470 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 3.5E-145 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 K04M3_40750 234bc75c7096e642916ca6963c00034c 350 SUPERFAMILY SSF56281 4 318 3.38E-24 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_40750 234bc75c7096e642916ca6963c00034c 350 Pfam PF00753 Metallo-beta-lactamase superfamily 16 81 4.3E-5 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_38860 4b3e33c3e49066252e30b6582a133eb4 278 SMART SM00382 34 216 2.0E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_38860 4b3e33c3e49066252e30b6582a133eb4 278 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_38860 4b3e33c3e49066252e30b6582a133eb4 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.4E-106 T 12-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 K04M3_38860 4b3e33c3e49066252e30b6582a133eb4 278 Gene3D G3DSA:3.40.50.300 3 277 4.9E-63 T 12-10-2018 K04M3_38860 4b3e33c3e49066252e30b6582a133eb4 278 Pfam PF00005 ABC transporter 25 166 2.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_38860 4b3e33c3e49066252e30b6582a133eb4 278 SUPERFAMILY SSF52540 6 227 5.2E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36250 e93b55fd7bc25f1e3a8775a4a574ff4d 253 Pfam PF00005 ABC transporter 23 178 3.3E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_36250 e93b55fd7bc25f1e3a8775a4a574ff4d 253 SUPERFAMILY SSF52540 3 250 2.66E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36250 e93b55fd7bc25f1e3a8775a4a574ff4d 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_36250 e93b55fd7bc25f1e3a8775a4a574ff4d 253 Gene3D G3DSA:3.40.50.300 4 253 2.6E-62 T 12-10-2018 K04M3_36250 e93b55fd7bc25f1e3a8775a4a574ff4d 253 SMART SM00382 31 225 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 183 318 9.0E-73 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 Gene3D G3DSA:3.30.1400.10 179 318 2.5E-51 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 182 309 8.5E-48 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 SMART SM00771 180 310 1.6E-73 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 312 23.311 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 SUPERFAMILY SSF64383 182 314 1.83E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 K04M3_07880 8976a6b6447bf8dbe18ed0958a61263a 318 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 310 1.1E-88 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 8.9E-74 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.803 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 PIRSF PIRSF001430 1 252 7.3E-76 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 Pfam PF01416 tRNA pseudouridine synthase 145 244 1.9E-29 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.2E-9 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 SUPERFAMILY SSF55120 1 256 6.47E-93 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 Gene3D G3DSA:3.30.70.580 1 104 1.1E-39 T 12-10-2018 K04M3_22290 8ef6ef41780891bac5ae9b24f9e044b0 264 Gene3D G3DSA:3.30.70.660 105 242 6.1E-49 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 SMART SM00116 210 258 0.72 T 12-10-2018 IPR000644 CBS domain K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 SMART SM00116 275 322 2.7 T 12-10-2018 IPR000644 CBS domain K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 Gene3D G3DSA:3.10.580.10 196 320 1.3E-43 T 12-10-2018 K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 SUPERFAMILY SSF53697 11 286 4.0E-68 T 12-10-2018 K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 Pfam PF00571 CBS domain 268 320 5.1E-7 T 12-10-2018 IPR000644 CBS domain K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 Pfam PF00571 CBS domain 211 258 1.1E-4 T 12-10-2018 IPR000644 CBS domain K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 Pfam PF01380 SIS domain 41 172 1.1E-31 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 PIRSF PIRSF004692 1 323 3.2E-131 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 Gene3D G3DSA:3.40.50.10490 4 195 8.1E-64 T 12-10-2018 K04M3_27980 03fe397b6f442035c850ab140c08c25c 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 7.2E-113 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 Gene3D G3DSA:1.10.357.10 49 193 1.4E-21 T 12-10-2018 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 SUPERFAMILY SSF46689 3 71 7.77E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 2.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 Gene3D G3DSA:1.10.10.60 1 47 1.6E-20 T 12-10-2018 K04M3_49160 063533c497b60d5de28860cbe6187d18 196 SUPERFAMILY SSF48498 81 192 3.37E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_04820 fd1c77af9e18813871070894f9889105 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.244 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 SUPERFAMILY SSF50249 12 149 4.16E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_04820 fd1c77af9e18813871070894f9889105 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 7.6E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 K04M3_04820 fd1c77af9e18813871070894f9889105 505 Gene3D G3DSA:2.40.50.140 5 151 3.3E-28 T 12-10-2018 K04M3_04820 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 Gene3D G3DSA:3.30.930.10 152 505 4.0E-131 T 12-10-2018 K04M3_04820 fd1c77af9e18813871070894f9889105 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 8.7E-201 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_04820 fd1c77af9e18813871070894f9889105 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 3.8E-81 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_04820 fd1c77af9e18813871070894f9889105 505 SUPERFAMILY SSF55681 156 502 9.03E-119 T 12-10-2018 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 Gene3D G3DSA:2.170.230.10 155 231 4.3E-74 T 12-10-2018 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 SUPERFAMILY SSF51306 78 298 4.71E-70 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 Pfam PF00717 Peptidase S24-like 86 162 9.3E-22 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 Gene3D G3DSA:2.10.109.10 78 272 4.3E-74 T 12-10-2018 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 1.2E-47 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 K04M3_26870 f9118fea40386726ad0a55e74f55cd6c 299 Pfam PF10502 Signal peptidase, peptidase S26 217 269 8.9E-8 T 12-10-2018 IPR019533 Peptidase S26 K04M3_45520 4945d8fb94082061a60d52202f813e23 333 SUPERFAMILY SSF46689 290 329 4.08E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_45520 4945d8fb94082061a60d52202f813e23 333 SMART SM00342 247 328 9.9E-11 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_45520 4945d8fb94082061a60d52202f813e23 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 195 8.8E-16 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal K04M3_45520 4945d8fb94082061a60d52202f813e23 333 Pfam PF12833 Helix-turn-helix domain 256 328 8.0E-12 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_45520 4945d8fb94082061a60d52202f813e23 333 Gene3D G3DSA:1.10.10.60 234 332 2.1E-15 T 12-10-2018 K04M3_45520 4945d8fb94082061a60d52202f813e23 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_45520 4945d8fb94082061a60d52202f813e23 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_03090 edb5408dc7d334c5db0b74eced308ba6 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 3.5E-87 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ K04M3_03090 edb5408dc7d334c5db0b74eced308ba6 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 1.2E-75 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ K04M3_44330 62f343f3b5ef494b4338ce0b6d358088 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.9E-138 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 K04M3_44330 62f343f3b5ef494b4338ce0b6d358088 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 2.6E-153 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 Gene3D G3DSA:3.30.70.20 218 280 3.8E-7 T 12-10-2018 K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 8.4E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 Pfam PF12801 4Fe-4S binding domain 82 127 1.4E-13 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 Pfam PF12801 4Fe-4S binding domain 174 211 3.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 SUPERFAMILY SSF54862 100 277 1.59E-19 T 12-10-2018 K04M3_35070 2bd6a5ef30512e07601a2aa91bef98ac 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 6.8E-111 T 12-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 Gene3D G3DSA:3.40.50.300 205 449 4.7E-56 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 Gene3D G3DSA:3.40.50.300 5 178 1.5E-27 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 6.9E-7 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 6.9E-7 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 6.9E-7 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 Gene3D G3DSA:1.10.8.60 450 536 5.4E-13 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 2.1E-9 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 Gene3D G3DSA:3.30.230.10 541 767 1.1E-90 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 Pfam PF13654 AAA domain 25 539 4.4E-185 T 12-10-2018 K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 SUPERFAMILY SSF54211 564 756 4.93E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_34990 f2a15931633e5a68ba68a13ba6aaf41d 786 SUPERFAMILY SSF52540 30 551 1.16E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_49370 d863ef26efc5e055f79dac8a18428aea 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.896 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_49370 d863ef26efc5e055f79dac8a18428aea 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 7.9E-135 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_49370 d863ef26efc5e055f79dac8a18428aea 411 Pfam PF03616 Sodium/glutamate symporter 6 379 1.8E-151 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 2.1E-106 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 Gene3D G3DSA:3.30.1490.20 107 177 2.7E-91 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 Pfam PF02222 ATP-grasp domain 101 274 5.4E-52 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 Gene3D G3DSA:3.40.50.20 1 80 6.2E-18 T 12-10-2018 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 SUPERFAMILY SSF51246 299 371 3.53E-19 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 SUPERFAMILY SSF56059 92 295 2.12E-56 T 12-10-2018 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.21 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 Gene3D G3DSA:3.30.470.20 92 343 2.7E-91 T 12-10-2018 K04M3_31900 028a8f7ad86e2b73dcd2d84074c51390 377 SUPERFAMILY SSF52440 1 88 2.16E-16 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_37990 0f12fcb9322700854c8aca556dd3ec16 312 Gene3D G3DSA:3.40.50.1820 15 293 4.0E-73 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_37990 0f12fcb9322700854c8aca556dd3ec16 312 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 18 156 5.9E-6 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 K04M3_37990 0f12fcb9322700854c8aca556dd3ec16 312 SUPERFAMILY SSF53474 3 312 1.51E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_37990 0f12fcb9322700854c8aca556dd3ec16 312 Gene3D G3DSA:1.10.10.800 144 233 4.0E-73 T 12-10-2018 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 SUPERFAMILY SSF46689 103 155 2.96E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 Gene3D G3DSA:1.10.10.60 103 206 5.6E-19 T 12-10-2018 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 Pfam PF12833 Helix-turn-helix domain 126 202 2.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 SUPERFAMILY SSF46689 164 203 2.2E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 186 202 4.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 171 186 4.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_38030 f52f308e51fee2e03792633aa71aa3aa 207 SMART SM00342 120 202 8.2E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 Gene3D G3DSA:1.20.120.530 78 221 5.8E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 Gene3D G3DSA:1.10.10.10 1 73 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 Pfam PF07729 FCD domain 82 206 8.7E-25 T 12-10-2018 IPR011711 GntR, C-terminal K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 SUPERFAMILY SSF48008 78 214 9.68E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 SMART SM00895 82 207 2.1E-19 T 12-10-2018 IPR011711 GntR, C-terminal K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 SUPERFAMILY SSF46785 9 76 1.77E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_13240 2ac75d365bf2be9fc81d767cedd07657 224 SMART SM00345 14 72 1.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 SUPERFAMILY SSF56801 3 614 2.62E-152 T 12-10-2018 K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 Gene3D G3DSA:3.30.300.30 497 624 9.6E-25 T 12-10-2018 K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 2.2E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 Gene3D G3DSA:3.40.50.12780 34 494 1.3E-100 T 12-10-2018 K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 1.5E-12 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 K04M3_17030 1bc3aab6c5a2e482bc80b88407ea8360 625 Pfam PF00501 AMP-binding enzyme 65 501 3.4E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_15480 6a3ab953359fb43e24a1d639875c754d 356 Gene3D G3DSA:3.40.50.2000 15 183 4.0E-15 T 12-10-2018 K04M3_15480 6a3ab953359fb43e24a1d639875c754d 356 Gene3D G3DSA:3.40.50.2000 187 337 2.6E-28 T 12-10-2018 K04M3_15480 6a3ab953359fb43e24a1d639875c754d 356 Pfam PF00534 Glycosyl transferases group 1 189 328 2.9E-20 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_15480 6a3ab953359fb43e24a1d639875c754d 356 Pfam PF13439 Glycosyltransferase Family 4 25 167 8.3E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_15480 6a3ab953359fb43e24a1d639875c754d 356 SUPERFAMILY SSF53756 23 351 1.26E-51 T 12-10-2018 K04M3_42400 69cd96704b3308215fdeee5992eb94a0 301 Gene3D G3DSA:3.40.190.290 93 294 8.5E-54 T 12-10-2018 K04M3_42400 69cd96704b3308215fdeee5992eb94a0 301 Gene3D G3DSA:1.10.10.10 4 91 4.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_42400 69cd96704b3308215fdeee5992eb94a0 301 SUPERFAMILY SSF53850 90 296 1.09E-37 T 12-10-2018 K04M3_42400 69cd96704b3308215fdeee5992eb94a0 301 Pfam PF03466 LysR substrate binding domain 90 292 1.6E-36 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_42400 69cd96704b3308215fdeee5992eb94a0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_42400 69cd96704b3308215fdeee5992eb94a0 301 SUPERFAMILY SSF46785 5 87 2.8E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.8E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 SUPERFAMILY SSF46785 1 68 1.22E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 Gene3D G3DSA:1.10.10.10 1 68 3.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 Gene3D G3DSA:3.40.640.10 138 357 7.3E-100 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 SMART SM00345 7 66 5.3E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 SUPERFAMILY SSF53383 91 462 1.88E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 Pfam PF00155 Aminotransferase class I and II 144 457 6.1E-35 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_19560 b014b7418901f26acbf8c5d3f8370c33 463 Gene3D G3DSA:3.90.1150.10 97 462 7.3E-100 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 182 7.1E-16 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 7.0E-33 T 12-10-2018 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 Gene3D G3DSA:1.10.150.240 16 84 2.1E-50 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 Gene3D G3DSA:3.40.50.1000 7 181 2.1E-50 T 12-10-2018 IPR023214 HAD superfamily K04M3_35670 829b53bbde8dfadc570c83cbaf8aef08 216 SUPERFAMILY SSF56784 1 213 1.02E-50 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_15730 01f9dc6938fcedd4e77653c14dfb99a6 302 Pfam PF00480 ROK family 2 300 1.0E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 K04M3_15730 01f9dc6938fcedd4e77653c14dfb99a6 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 K04M3_15730 01f9dc6938fcedd4e77653c14dfb99a6 302 SUPERFAMILY SSF53067 1 299 1.6E-57 T 12-10-2018 K04M3_15730 01f9dc6938fcedd4e77653c14dfb99a6 302 Gene3D G3DSA:3.30.420.40 4 297 1.1E-100 T 12-10-2018 K04M3_15730 01f9dc6938fcedd4e77653c14dfb99a6 302 Gene3D G3DSA:3.30.420.40 119 290 1.1E-100 T 12-10-2018 K04M3_15730 01f9dc6938fcedd4e77653c14dfb99a6 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.697 T 12-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.629 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 Pfam PF00265 Thymidine kinase 2 186 8.6E-60 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 PIRSF PIRSF035805 1 192 4.1E-57 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 Gene3D G3DSA:3.40.50.300 2 140 1.6E-23 T 12-10-2018 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 Gene3D G3DSA:3.30.60.20 144 189 3.6E-8 T 12-10-2018 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 SUPERFAMILY SSF57716 142 190 1.62E-16 T 12-10-2018 K04M3_11230 f23772a31ca9d546155f4c513f891ea9 192 SUPERFAMILY SSF52540 2 141 2.2E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12940 9539701b2e9f3bab1c2a60f9acc09564 159 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 5 36 8.1E-5 T 12-10-2018 IPR010027 Bacteriophage lambda, GpG, minor tail K04M3_01780 0970ea49af4c8678cf2ace105afa2155 135 Gene3D G3DSA:1.10.3830.10 15 133 4.4E-38 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 K04M3_01780 0970ea49af4c8678cf2ace105afa2155 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 129 4.2E-33 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 K04M3_01780 0970ea49af4c8678cf2ace105afa2155 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 SUPERFAMILY SSF48557 14 467 1.41E-145 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 Gene3D G3DSA:1.10.40.30 421 470 1.1E-28 T 12-10-2018 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.1E-252 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 Pfam PF10415 Fumarase C C-terminus 421 473 4.2E-18 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 Gene3D G3DSA:1.20.200.10 153 420 8.1E-113 T 12-10-2018 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 Pfam PF00206 Lyase 23 355 1.5E-102 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 K04M3_30050 0f14203da7447efad6332a2dd53d8c11 483 Gene3D G3DSA:1.10.275.10 16 152 2.0E-59 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal K04M3_42940 48fe6df21d3a10c0051f88c816a4ced3 393 SUPERFAMILY SSF53383 43 386 4.35E-73 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_42940 48fe6df21d3a10c0051f88c816a4ced3 393 Gene3D G3DSA:3.40.640.10 59 290 4.6E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_42940 48fe6df21d3a10c0051f88c816a4ced3 393 Gene3D G3DSA:3.90.1150.10 20 382 4.6E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_42940 48fe6df21d3a10c0051f88c816a4ced3 393 Pfam PF00155 Aminotransferase class I and II 46 378 2.6E-29 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 1.7E-51 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 SUPERFAMILY SSF51735 3 167 9.14E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 PIRSF PIRSF000103 1 301 4.2E-79 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 SUPERFAMILY SSF48179 168 297 7.6E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 296 9.2E-30 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 Gene3D G3DSA:1.10.1040.10 169 301 4.4E-43 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 Gene3D G3DSA:3.40.50.720 1 167 5.3E-53 T 12-10-2018 K04M3_38280 2f3da5bbb818fc7ab032133c4815283c 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 3.8E-120 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 K04M3_24490 1466c3beef72d563e2c58e653a80b46b 496 Pfam PF01740 STAS domain 403 487 2.3E-10 T 12-10-2018 IPR002645 STAS domain K04M3_24490 1466c3beef72d563e2c58e653a80b46b 496 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 K04M3_24490 1466c3beef72d563e2c58e653a80b46b 496 Pfam PF00916 Sulfate permease family 142 345 1.6E-27 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 K04M3_24490 1466c3beef72d563e2c58e653a80b46b 496 Gene3D G3DSA:3.30.750.24 387 484 4.1E-28 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_24490 1466c3beef72d563e2c58e653a80b46b 496 SUPERFAMILY SSF52091 393 485 3.53E-12 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 SUPERFAMILY SSF56420 3 165 2.36E-63 T 12-10-2018 IPR036821 Peptide deformylase superfamily K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 PRINTS PR01576 Peptide deformylase signature 33 62 5.7E-38 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 PRINTS PR01576 Peptide deformylase signature 101 119 5.7E-38 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 PRINTS PR01576 Peptide deformylase signature 120 149 5.7E-38 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 PRINTS PR01576 Peptide deformylase signature 89 100 5.7E-38 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 6.8E-63 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 Gene3D G3DSA:3.90.45.10 1 169 2.7E-67 T 12-10-2018 IPR036821 Peptide deformylase superfamily K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.156 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 PIRSF PIRSF004749 1 172 3.7E-57 T 12-10-2018 IPR023635 Peptide deformylase K04M3_31950 9b6404dd9b662b6407cb7b4d02fd317e 172 Pfam PF01327 Polypeptide deformylase 4 152 5.7E-51 T 12-10-2018 IPR023635 Peptide deformylase K04M3_16860 b423c0d182edae73f4941e43651d8a79 114 PIRSF PIRSF028299 1 113 7.7E-16 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 K04M3_16860 b423c0d182edae73f4941e43651d8a79 114 Pfam PF11777 Protein of unknown function (DUF3316) 2 107 8.1E-12 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 K04M3_42630 a0ba51d7e73a08f789c0eb5cc4dadfaf 291 Gene3D G3DSA:3.40.50.12370 12 291 1.1E-22 T 12-10-2018 K04M3_42630 a0ba51d7e73a08f789c0eb5cc4dadfaf 291 SUPERFAMILY SSF52402 174 287 8.37E-9 T 12-10-2018 K04M3_42630 a0ba51d7e73a08f789c0eb5cc4dadfaf 291 Pfam PF00582 Universal stress protein family 223 286 2.9E-6 T 12-10-2018 IPR006016 UspA K04M3_39110 114e7e6afbb9c903ae3aa7e61db7dc61 607 Pfam PF05947 Type VI secretion system, TssF 6 605 1.2E-177 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like K04M3_39110 114e7e6afbb9c903ae3aa7e61db7dc61 607 PIRSF PIRSF028304 1 606 2.8E-152 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like K04M3_39110 114e7e6afbb9c903ae3aa7e61db7dc61 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 9.7E-197 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 SUPERFAMILY SSF53901 268 401 3.36E-32 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 1.8E-119 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 PIRSF PIRSF000429 1 402 8.3E-105 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 Pfam PF00108 Thiolase, N-terminal domain 6 260 4.1E-81 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 Gene3D G3DSA:3.40.47.10 7 273 1.0E-131 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 Gene3D G3DSA:3.40.47.10 125 397 1.0E-131 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 SUPERFAMILY SSF53901 4 267 7.52E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_38230 bb20390f1ba11052e9a7f656a4efa4ca 403 Pfam PF02803 Thiolase, C-terminal domain 267 400 8.4E-35 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 3 21 4.5E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 66 79 4.5E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 52 65 4.5E-11 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 Gene3D G3DSA:3.40.30.10 1 84 7.2E-25 T 12-10-2018 K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 SUPERFAMILY SSF52833 3 81 5.39E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.5E-46 T 12-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 K04M3_11900 71d047e8aa4bb4faed43c9ea9c23ecfd 88 Pfam PF00462 Glutaredoxin 3 69 4.7E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 Pfam PF00462 Glutaredoxin 109 174 4.8E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 PRINTS PR00160 Glutaredoxin signature 171 184 1.3E-8 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 PRINTS PR00160 Glutaredoxin signature 157 170 1.3E-8 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 PRINTS PR00160 Glutaredoxin signature 108 126 1.3E-8 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 Gene3D G3DSA:3.40.30.10 109 185 4.5E-20 T 12-10-2018 K04M3_37130 bc77a07e19e7c49e5da4df37d9639ed7 204 SUPERFAMILY SSF52833 109 189 5.34E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 342 9.7E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 Gene3D G3DSA:3.30.70.270 180 347 2.3E-52 T 12-10-2018 K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 Gene3D G3DSA:3.30.450.40 27 179 2.9E-20 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 SMART SM00065 36 180 1.4E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 SUPERFAMILY SSF55781 28 171 3.49E-21 T 12-10-2018 K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 340 9.8E-42 T 12-10-2018 IPR000160 GGDEF domain K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 Pfam PF01590 GAF domain 37 169 4.5E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 SMART SM00267 165 344 2.6E-48 T 12-10-2018 IPR000160 GGDEF domain K04M3_36610 110301eba9c9702f226c38da2ea375d4 349 SUPERFAMILY SSF55073 188 343 5.41E-45 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_37370 dae6e44d2760b78f521b1c4188936a41 181 Pfam PF07152 YaeQ protein 1 171 3.1E-63 T 12-10-2018 IPR009822 YaeQ K04M3_37370 dae6e44d2760b78f521b1c4188936a41 181 SMART SM01322 1 174 1.2E-95 T 12-10-2018 IPR009822 YaeQ K04M3_37370 dae6e44d2760b78f521b1c4188936a41 181 SUPERFAMILY SSF52980 2 176 1.69E-61 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_37370 dae6e44d2760b78f521b1c4188936a41 181 Gene3D G3DSA:3.10.640.10 1 179 3.7E-63 T 12-10-2018 IPR038590 YaeQ superfamily K04M3_37370 dae6e44d2760b78f521b1c4188936a41 181 PIRSF PIRSF011484 1 179 5.4E-62 T 12-10-2018 IPR009822 YaeQ K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:3.30.70.1440 668 859 2.3E-252 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:1.20.1640.10 500 1019 2.3E-252 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 SUPERFAMILY SSF82866 797 1022 7.72E-47 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 SUPERFAMILY SSF82714 724 797 1.18E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:3.30.70.1430 38 810 2.3E-252 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:3.30.70.1320 131 318 2.3E-252 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:3.30.70.1430 557 667 2.3E-252 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 SUPERFAMILY SSF82714 177 259 2.35E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:3.30.2090.10 173 265 2.3E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 SUPERFAMILY SSF82693 136 317 1.99E-6 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 SUPERFAMILY SSF82866 286 480 3.27E-34 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 3.5E-158 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:3.30.2090.10 715 802 2.3E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 Gene3D G3DSA:1.20.1640.10 8 499 2.3E-252 T 12-10-2018 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46490 16275f4d915b707a814c13bd5b9d3a2b 1033 SUPERFAMILY SSF82693 38 131 1.1E-17 T 12-10-2018 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 SMART SM00278 534 553 0.14 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 SMART SM00278 566 585 300.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 SUPERFAMILY SSF46600 168 221 2.09E-13 T 12-10-2018 IPR036876 UVR domain superfamily K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Pfam PF01541 GIY-YIG catalytic domain 2 71 2.0E-9 T 12-10-2018 IPR000305 GIY-YIG endonuclease K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 585 26.887 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Pfam PF02151 UvrB/uvrC motif 183 216 1.2E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 520 3.0E-43 T 12-10-2018 IPR001162 UvrC family homology region K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Gene3D G3DSA:3.40.1440.10 1 80 2.7E-25 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Gene3D G3DSA:3.30.420.340 358 530 2.6E-45 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Pfam PF14520 Helix-hairpin-helix domain 536 587 2.2E-9 T 12-10-2018 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 SUPERFAMILY SSF47781 499 587 3.81E-19 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 567 3.8E-210 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 SUPERFAMILY SSF82771 2 78 2.62E-19 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 Gene3D G3DSA:1.10.150.20 533 588 7.3E-25 T 12-10-2018 K04M3_20070 6c205f3e95a35074ae23f9696434c897 588 SMART SM00465 1 76 4.8E-15 T 12-10-2018 IPR000305 GIY-YIG endonuclease K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 Pfam PF03466 LysR substrate binding domain 121 306 8.9E-23 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 SUPERFAMILY SSF53850 106 308 3.44E-39 T 12-10-2018 K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:3.40.190.10 187 283 3.8E-41 T 12-10-2018 K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_03530 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:3.40.190.10 108 307 3.8E-41 T 12-10-2018 K04M3_05730 7a6d55022939f364a152332e7b1f10f2 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 4.4E-38 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 K04M3_05730 7a6d55022939f364a152332e7b1f10f2 107 Gene3D G3DSA:2.60.300.12 2 107 9.6E-39 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 K04M3_05730 7a6d55022939f364a152332e7b1f10f2 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.9E-58 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 K04M3_05730 7a6d55022939f364a152332e7b1f10f2 107 SUPERFAMILY SSF89360 1 96 1.23E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 K04M3_05730 7a6d55022939f364a152332e7b1f10f2 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.3E-26 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 K04M3_05730 7a6d55022939f364a152332e7b1f10f2 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.2E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 SUPERFAMILY SSF46785 5 77 4.83E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 SMART SM01134 72 234 2.9E-67 T 12-10-2018 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.6E-24 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 SMART SM00420 6 58 1.2E-27 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 Gene3D G3DSA:3.30.750.70 70 130 5.3E-8 T 12-10-2018 K04M3_25170 236a48e4b31ef023e77fe4de63bd3814 263 SUPERFAMILY SSF100950 74 234 7.78E-29 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_22810 50ad17525f4490aa75a30aeb66d014f0 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 6.6E-20 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 K04M3_46830 24857049f24655e41a3e9f8eee1a0a13 241 Gene3D G3DSA:3.90.79.10 3 161 1.3E-25 T 12-10-2018 K04M3_46830 24857049f24655e41a3e9f8eee1a0a13 241 SUPERFAMILY SSF55811 16 159 6.58E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_46830 24857049f24655e41a3e9f8eee1a0a13 241 Pfam PF00293 NUDIX domain 19 148 1.8E-8 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 Gene3D G3DSA:2.40.30.20 102 205 4.9E-36 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 SUPERFAMILY SSF63380 93 198 7.14E-33 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 SUPERFAMILY SSF63380 1 89 1.28E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 Gene3D G3DSA:2.40.30.20 1 89 1.1E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 5.2E-66 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 Pfam PF00677 Lumazine binding domain 3 87 2.7E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 Pfam PF00677 Lumazine binding domain 100 184 3.2E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06580 5bd3fb1170006cbd56a942219a1a37be 217 PIRSF PIRSF000498 1 211 1.5E-80 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_49340 3422f768cc91120648e5809d6f7b350e 123 Gene3D G3DSA:1.10.10.10 7 121 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_49340 3422f768cc91120648e5809d6f7b350e 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 6.7E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_49340 3422f768cc91120648e5809d6f7b350e 123 SUPERFAMILY SSF46785 1 82 2.06E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_49340 3422f768cc91120648e5809d6f7b350e 123 SMART SM00345 14 73 1.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 6.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 SUPERFAMILY SSF88659 219 318 2.06E-24 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_26670 2361758820f60283b07f8ed83a256a99 328 SUPERFAMILY SSF88659 162 235 2.09E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_26670 2361758820f60283b07f8ed83a256a99 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 311 3.5E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 8.5E-139 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 16 323 39.606 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Gene3D G3DSA:1.10.601.10 2 158 1.2E-47 T 12-10-2018 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Pfam PF04539 Sigma-70 region 3 169 242 2.5E-22 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Gene3D G3DSA:1.10.10.10 245 323 3.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Pfam PF04542 Sigma-70 region 2 89 158 6.8E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Gene3D G3DSA:1.10.10.10 162 237 3.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26670 2361758820f60283b07f8ed83a256a99 328 Pfam PF04545 Sigma-70, region 4 257 310 2.2E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_26670 2361758820f60283b07f8ed83a256a99 328 SUPERFAMILY SSF88946 50 159 9.42E-46 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 SMART SM00354 1 74 1.3E-13 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 Gene3D G3DSA:3.40.50.2300 76 304 8.8E-43 T 12-10-2018 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 Gene3D G3DSA:3.40.50.2300 159 287 8.8E-43 T 12-10-2018 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 SUPERFAMILY SSF47413 3 53 1.59E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 2.5E-29 T 12-10-2018 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 SUPERFAMILY SSF53822 76 327 1.57E-40 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 Gene3D G3DSA:1.10.260.40 2 60 1.7E-16 T 12-10-2018 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 K04M3_25230 10c283cafd7c5792f913e876921f7f4e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 7.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 79.511 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 SUPERFAMILY SSF56176 8 197 7.19E-39 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 Gene3D G3DSA:3.90.78.10 223 347 5.2E-42 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 4.1E-90 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 SUPERFAMILY SSF56194 207 341 3.4E-46 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 Gene3D G3DSA:3.30.43.10 1 72 4.4E-24 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 1.3E-30 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 Gene3D G3DSA:3.30.465.10 73 222 7.2E-52 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 K04M3_30670 4ba8b8ed8a3130e883a28ca6bde32551 347 Pfam PF01565 FAD binding domain 23 144 3.4E-17 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 K04M3_27860 75d79194ecab70024f27057086e2628b 329 Gene3D G3DSA:3.40.50.1370 28 324 7.5E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 28 168 2.0E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 69 76 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 Gene3D G3DSA:3.40.50.1370 155 312 7.5E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 28 325 6.1E-117 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 27 327 39.026 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 99 108 5.1E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 59 81 5.1E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 306 320 5.1E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 255 5.1E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 154 171 5.1E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 289 5.1E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_27860 75d79194ecab70024f27057086e2628b 329 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 175 323 1.2E-32 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 SUPERFAMILY SSF53671 24 327 2.49E-102 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 290 313 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 289 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 69 88 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_27860 75d79194ecab70024f27057086e2628b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 155 166 1.5E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 Pfam PF00107 Zinc-binding dehydrogenase 208 336 6.5E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 Gene3D G3DSA:3.40.50.720 185 323 5.6E-153 T 12-10-2018 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 SUPERFAMILY SSF51735 171 345 1.45E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 Gene3D G3DSA:3.90.180.10 17 375 5.6E-153 T 12-10-2018 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 9.3E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 SUPERFAMILY SSF50129 10 196 3.83E-72 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 5.9E-230 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 SMART SM00829 23 378 0.0012 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_48970 4dff0a6c4e4e9d5c6dc67cd1c9af5428 382 SUPERFAMILY SSF50129 329 379 4.19E-11 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.8E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 SUPERFAMILY SSF53706 40 660 1.09E-167 T 12-10-2018 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 Gene3D G3DSA:3.90.55.10 82 615 1.9E-239 T 12-10-2018 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.7E-78 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 Gene3D G3DSA:3.40.228.10 179 641 1.9E-239 T 12-10-2018 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 12-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 SUPERFAMILY SSF50692 669 817 1.63E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 Gene3D G3DSA:2.40.40.20 649 813 1.3E-48 T 12-10-2018 K04M3_11340 b1e41beb933d7afd6c3d2b7128537406 820 Gene3D G3DSA:3.40.50.740 87 569 1.9E-239 T 12-10-2018 K04M3_38700 5b63bf633ce4a628b918ab940bd3265b 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 3.3E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_38700 5b63bf633ce4a628b918ab940bd3265b 413 SUPERFAMILY SSF55874 294 400 1.92E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_38700 5b63bf633ce4a628b918ab940bd3265b 413 Gene3D G3DSA:1.10.287.130 228 285 7.5E-13 T 12-10-2018 K04M3_38700 5b63bf633ce4a628b918ab940bd3265b 413 Gene3D G3DSA:3.30.565.10 286 357 7.5E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_38700 5b63bf633ce4a628b918ab940bd3265b 413 SUPERFAMILY SSF47384 205 282 1.29E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_38700 5b63bf633ce4a628b918ab940bd3265b 413 SMART SM00388 220 286 9.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.7E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 1.0E-14 T 12-10-2018 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.1E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SUPERFAMILY SSF54747 3 73 5.1E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Gene3D G3DSA:3.30.1550.10 2 72 1.0E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SMART SM00649 9 141 2.2E-82 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_30570 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily K04M3_22840 8b0b67eb5525d12281370bd9a84a5165 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 2.8E-37 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 K04M3_22840 8b0b67eb5525d12281370bd9a84a5165 147 Pfam PF02050 Flagellar FliJ protein 17 140 4.5E-30 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 K04M3_22840 8b0b67eb5525d12281370bd9a84a5165 147 SUPERFAMILY SSF109604 27 117 4.4E-5 T 12-10-2018 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 Gene3D G3DSA:3.30.565.10 444 581 8.0E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 SUPERFAMILY SSF158472 184 231 1.26E-7 T 12-10-2018 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 Pfam PF07730 Histidine kinase 375 443 7.6E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 40 134 4.2E-21 T 12-10-2018 IPR029095 NarX-like, N-terminal K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 Gene3D G3DSA:1.20.120.960 46 154 4.7E-12 T 12-10-2018 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 Gene3D G3DSA:1.10.287.130 182 284 3.8E-6 T 12-10-2018 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 SMART SM00304 182 234 2.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 SMART SM00387 484 577 1.2E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 PIRSF PIRSF003167 4 583 2.7E-178 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 575 3.7E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45050 01cd501ed6fcdcea82ce13e85c0ee6fd 584 SUPERFAMILY SSF55874 453 573 4.06E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_03570 4ecdc681da52281a23292043f4798038 632 Gene3D G3DSA:3.30.450.20 79 212 5.2E-42 T 12-10-2018 K04M3_03570 4ecdc681da52281a23292043f4798038 632 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 350 467 1.2E-10 T 12-10-2018 IPR000014 PAS domain K04M3_03570 4ecdc681da52281a23292043f4798038 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 620 8.9E-35 T 12-10-2018 IPR000160 GGDEF domain K04M3_03570 4ecdc681da52281a23292043f4798038 632 SUPERFAMILY SSF103190 42 212 3.22E-50 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_03570 4ecdc681da52281a23292043f4798038 632 SUPERFAMILY SSF103190 213 304 6.75E-23 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_03570 4ecdc681da52281a23292043f4798038 632 Pfam PF02743 Cache domain 44 289 6.9E-14 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_03570 4ecdc681da52281a23292043f4798038 632 Gene3D G3DSA:3.30.450.20 339 473 4.1E-20 T 12-10-2018 K04M3_03570 4ecdc681da52281a23292043f4798038 632 SUPERFAMILY SSF55785 358 468 3.14E-17 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_03570 4ecdc681da52281a23292043f4798038 632 SUPERFAMILY SSF55073 476 624 4.08E-39 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_03570 4ecdc681da52281a23292043f4798038 632 Pfam PF13426 PAS domain 358 458 2.1E-9 T 12-10-2018 IPR000014 PAS domain K04M3_03570 4ecdc681da52281a23292043f4798038 632 SMART SM00267 460 625 5.8E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_03570 4ecdc681da52281a23292043f4798038 632 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 468 623 3.1E-38 T 12-10-2018 IPR000160 GGDEF domain K04M3_03570 4ecdc681da52281a23292043f4798038 632 Gene3D G3DSA:3.30.70.270 474 630 6.0E-43 T 12-10-2018 K04M3_03570 4ecdc681da52281a23292043f4798038 632 Gene3D G3DSA:1.20.5.170 32 78 1.2E-23 T 12-10-2018 K04M3_03570 4ecdc681da52281a23292043f4798038 632 Gene3D G3DSA:3.30.450.20 213 308 6.5E-31 T 12-10-2018 K04M3_04470 6b8f0bac95003607a2e728d214b7d952 273 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 270 50.245 T 12-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 K04M3_04470 6b8f0bac95003607a2e728d214b7d952 273 SUPERFAMILY SSF53807 20 266 2.24E-56 T 12-10-2018 K04M3_04470 6b8f0bac95003607a2e728d214b7d952 273 Pfam PF01497 Periplasmic binding protein 24 245 4.9E-27 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain K04M3_04470 6b8f0bac95003607a2e728d214b7d952 273 Gene3D G3DSA:3.40.50.1980 20 138 4.8E-34 T 12-10-2018 K04M3_04470 6b8f0bac95003607a2e728d214b7d952 273 Gene3D G3DSA:3.40.50.1980 141 269 2.8E-30 T 12-10-2018 K04M3_07070 0d5b15242f3dc27c6657c41e569aeab4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.469 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 K04M3_07070 0d5b15242f3dc27c6657c41e569aeab4 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 4.3E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 K04M3_07070 0d5b15242f3dc27c6657c41e569aeab4 154 Gene3D G3DSA:3.40.390.30 1 154 2.4E-59 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 K04M3_07070 0d5b15242f3dc27c6657c41e569aeab4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site K04M3_07070 0d5b15242f3dc27c6657c41e569aeab4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 2.8E-37 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 K04M3_07070 0d5b15242f3dc27c6657c41e569aeab4 154 SUPERFAMILY SSF55486 3 150 6.35E-49 T 12-10-2018 K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.663 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 Pfam PF01228 Glycine radical 16 106 3.8E-23 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 PIRSF PIRSF000378 2 125 6.7E-54 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.1E-68 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 Gene3D G3DSA:3.20.70.20 14 125 1.1E-25 T 12-10-2018 K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site K04M3_04670 8113755e23acdc884c82fc5c6d373b8f 125 SUPERFAMILY SSF51998 64 124 9.61E-24 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 Pfam PF00890 FAD binding domain 7 397 3.8E-113 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 SUPERFAMILY SSF56425 227 358 3.59E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 PIRSF PIRSF000171 1 575 1.3E-45 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.5E-37 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 Gene3D G3DSA:1.20.58.100 424 538 1.3E-35 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 Gene3D G3DSA:3.90.700.10 237 363 7.9E-162 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 Gene3D G3DSA:4.10.80.40 543 577 4.1E-16 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 12-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.7E-236 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 Gene3D G3DSA:3.50.50.60 7 409 7.9E-162 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 SUPERFAMILY SSF46977 444 581 1.31E-43 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.1E-9 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.1E-9 T 12-10-2018 K04M3_29850 25d64d10f69e03dd0c32c2107af700ad 599 SUPERFAMILY SSF51905 3 441 1.79E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Gene3D G3DSA:3.40.50.300 110 275 1.8E-112 T 12-10-2018 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Gene3D G3DSA:3.30.70.3280 390 529 2.6E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 SUPERFAMILY SSF54980 393 468 2.77E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 3.3E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.6E-46 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.665 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 SUPERFAMILY SSF52540 10 277 6.75E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 3.5E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 2.1E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 1.4E-297 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 Gene3D G3DSA:3.40.50.300 72 379 1.8E-112 T 12-10-2018 K04M3_25470 b7131216a35870495f77c1d9b5b89457 529 SUPERFAMILY SSF50447 262 393 3.53E-27 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_20830 4e8366d6adc97d2d723d463a4af37e7a 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 4.9E-18 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 K04M3_20830 4e8366d6adc97d2d723d463a4af37e7a 98 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.446 T 12-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Gene3D G3DSA:3.30.460.10 208 340 1.0E-48 T 12-10-2018 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 4.6E-183 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 SMART SM00954 250 360 8.3E-64 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 SUPERFAMILY SSF55021 662 737 2.96E-9 T 12-10-2018 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Pfam PF13328 HD domain 50 190 2.0E-35 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 SUPERFAMILY SSF109604 53 205 8.79E-42 T 12-10-2018 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 SUPERFAMILY SSF81271 395 461 7.41E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Gene3D G3DSA:3.30.70.260 660 739 3.9E-15 T 12-10-2018 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Gene3D G3DSA:1.10.3210.10 48 205 3.9E-35 T 12-10-2018 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Pfam PF02824 TGS domain 402 461 1.6E-20 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Gene3D G3DSA:3.10.20.30 396 469 1.5E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 SUPERFAMILY SSF81301 195 406 2.45E-61 T 12-10-2018 K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Pfam PF13291 ACT domain 661 737 3.4E-15 T 12-10-2018 IPR002912 ACT domain K04M3_26790 e3a80da26889222f9178d376d3b7a277 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 SMART SM00382 43 236 6.4E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 Pfam PF00005 ABC transporter 35 186 9.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.5E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 Gene3D G3DSA:3.40.50.300 5 327 4.3E-96 T 12-10-2018 K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 2.3E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 SUPERFAMILY SSF52540 10 258 9.58E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_13370 ad755911388b7374b1dfe9af835350e1 330 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 5.6E-52 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 SUPERFAMILY SSF74982 8 139 8.24E-48 T 12-10-2018 IPR023620 Small protein B K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 8.0E-68 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 Pfam PF01668 SmpB protein 15 157 3.1E-55 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.995 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 K04M3_06220 d27f2f5836f171116e77704d7be0c03f 161 Gene3D G3DSA:2.40.280.10 7 136 1.3E-43 T 12-10-2018 IPR023620 Small protein B K04M3_35990 1ee7087ba306b69123fa04636b95f1c3 301 PIRSF PIRSF016660 1 301 1.0E-119 T 12-10-2018 IPR008526 Inner membrane protein YedI K04M3_35990 1ee7087ba306b69123fa04636b95f1c3 301 Pfam PF05661 Protein of unknown function (DUF808) 4 291 2.0E-114 T 12-10-2018 IPR008526 Inner membrane protein YedI K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 3.4E-249 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 Gene3D G3DSA:3.40.50.300 76 351 3.9E-110 T 12-10-2018 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 2.3E-60 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 Gene3D G3DSA:1.10.1140.10 352 467 1.9E-53 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 SUPERFAMILY SSF52540 77 355 6.77E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 SMART SM00382 142 334 2.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 SUPERFAMILY SSF47917 352 466 6.28E-51 T 12-10-2018 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.6E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 Gene3D G3DSA:2.40.10.170 2 75 8.9E-30 T 12-10-2018 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 SUPERFAMILY SSF50615 1 75 2.33E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_32230 0e1d528c772d13b20573ad5cbc4cbcf0 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.099 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 K04M3_24150 7f9877495abbf98cfc381cbeebde339d 352 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 240 247 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_24150 7f9877495abbf98cfc381cbeebde339d 352 SUPERFAMILY SSF56059 107 259 5.63E-9 T 12-10-2018 K04M3_24150 7f9877495abbf98cfc381cbeebde339d 352 Pfam PF02655 ATP-grasp domain 92 249 6.0E-7 T 12-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SMART SM00062 267 481 6.0E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SMART SM00062 33 244 2.6E-6 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 889 1.0E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 274 478 2.3E-13 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:3.40.190.10 267 478 6.9E-22 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SMART SM00388 667 732 2.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SUPERFAMILY SSF47384 652 733 3.92E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SUPERFAMILY SSF52172 995 1112 1.07E-29 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SMART SM00387 779 890 9.9E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 234 1.8E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:3.30.565.10 731 893 2.1E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SMART SM00448 994 1107 4.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SUPERFAMILY SSF53850 270 481 6.19E-16 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Pfam PF00072 Response regulator receiver domain 996 1106 3.0E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:1.10.287.130 637 730 3.1E-21 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 732 7.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:3.40.190.10 32 233 4.2E-22 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SUPERFAMILY SSF53850 56 234 5.0E-23 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:3.40.50.2300 994 1116 2.4E-29 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SUPERFAMILY SSF47226 1122 1213 1.57E-9 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:1.20.120.160 1120 1217 2.7E-6 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:3.40.190.10 120 210 4.2E-22 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 Gene3D G3DSA:3.40.190.10 354 444 6.9E-22 T 12-10-2018 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 SUPERFAMILY SSF55874 721 892 1.96E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_42920 9e8087d8e017e0a85577670103ac2208 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_44520 7e4e8e3993a2f436f29804f0a1055650 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.2E-64 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp K04M3_44520 7e4e8e3993a2f436f29804f0a1055650 172 SUPERFAMILY SSF141452 3 168 1.96E-38 T 12-10-2018 IPR036624 Hcp1-like superfamily K04M3_44520 7e4e8e3993a2f436f29804f0a1055650 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.2E-29 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp K04M3_44520 7e4e8e3993a2f436f29804f0a1055650 172 Gene3D G3DSA:2.30.110.20 2 172 2.7E-62 T 12-10-2018 IPR036624 Hcp1-like superfamily K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 PIRSF PIRSF000137 1 546 1.7E-148 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Gene3D G3DSA:1.10.1220.110 97 150 1.1E-175 T 12-10-2018 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Gene3D G3DSA:3.30.410.40 151 476 1.1E-175 T 12-10-2018 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 537 3.1E-234 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 558 59.754 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Pfam PF00732 GMC oxidoreductase 5 302 5.3E-87 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Gene3D G3DSA:4.10.450.10 38 198 1.1E-175 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Gene3D G3DSA:3.50.50.60 4 535 1.1E-175 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 SUPERFAMILY SSF51905 1 538 1.22E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 Pfam PF05199 GMC oxidoreductase 393 531 5.8E-40 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 K04M3_43690 e69e5659cba00981408f996e4e8170a0 571 SUPERFAMILY SSF54373 297 479 1.57E-61 T 12-10-2018 K04M3_15770 b8ff172bdf4ab949a6e61d011ff4f386 239 Gene3D G3DSA:3.40.50.300 2 229 1.5E-51 T 12-10-2018 K04M3_15770 b8ff172bdf4ab949a6e61d011ff4f386 239 SUPERFAMILY SSF52540 5 216 5.43E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15770 b8ff172bdf4ab949a6e61d011ff4f386 239 Pfam PF00005 ABC transporter 25 165 7.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_15770 b8ff172bdf4ab949a6e61d011ff4f386 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_15770 b8ff172bdf4ab949a6e61d011ff4f386 239 SMART SM00382 29 201 5.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 111 129 3.2E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 238 247 3.2E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 214 225 3.2E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 334 348 3.2E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 3.2E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 SUPERFAMILY SSF48208 4 353 5.35E-95 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 Pfam PF01270 Glycosyl hydrolases family 8 18 348 7.4E-63 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_08020 0c5f1b0a791b87eaf5b22879108865b7 368 Gene3D G3DSA:1.50.10.10 20 363 2.6E-116 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 6.1E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 6.3E-247 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 Gene3D G3DSA:3.40.30.80 1 200 9.2E-65 T 12-10-2018 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 Pfam PF13192 Thioredoxin domain 120 194 5.7E-12 T 12-10-2018 IPR012336 Thioredoxin-like fold K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 SUPERFAMILY SSF51905 203 516 9.26E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 SUPERFAMILY SSF52833 1 101 1.34E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PIRSF PIRSF000238 1 522 9.8E-254 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 Gene3D G3DSA:3.50.50.60 328 451 1.2E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 3.2E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 6.0E-35 T 12-10-2018 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.0E-35 T 12-10-2018 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 6.0E-35 T 12-10-2018 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 6.0E-35 T 12-10-2018 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 6.0E-35 T 12-10-2018 K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 Gene3D G3DSA:3.50.50.60 213 510 1.2E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_32900 5cd8b2e192e0dabefce3c22b36bc3785 522 SUPERFAMILY SSF52833 105 197 2.77E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_13710 8da8803029064aa977acde313b039405 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 4.0E-172 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 K04M3_13710 8da8803029064aa977acde313b039405 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.812 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 K04M3_13710 8da8803029064aa977acde313b039405 360 SUPERFAMILY SSF55909 3 360 5.71E-137 T 12-10-2018 K04M3_13710 8da8803029064aa977acde313b039405 360 Gene3D G3DSA:3.75.10.10 2 360 5.7E-134 T 12-10-2018 K04M3_13710 8da8803029064aa977acde313b039405 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 1.3E-118 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 K04M3_14070 8da8803029064aa977acde313b039405 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 4.0E-172 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 K04M3_14070 8da8803029064aa977acde313b039405 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.812 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 K04M3_14070 8da8803029064aa977acde313b039405 360 SUPERFAMILY SSF55909 3 360 5.71E-137 T 12-10-2018 K04M3_14070 8da8803029064aa977acde313b039405 360 Gene3D G3DSA:3.75.10.10 2 360 5.7E-134 T 12-10-2018 K04M3_14070 8da8803029064aa977acde313b039405 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 1.3E-118 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 K04M3_28210 19edfec04a05a909f4d9a269143c74cc 298 PIRSF PIRSF038471 2 283 4.6E-83 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 K04M3_28210 19edfec04a05a909f4d9a269143c74cc 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 2.4E-91 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 K04M3_28210 19edfec04a05a909f4d9a269143c74cc 298 Gene3D G3DSA:2.40.10.340 122 266 3.9E-37 T 12-10-2018 K04M3_28210 19edfec04a05a909f4d9a269143c74cc 298 Gene3D G3DSA:2.40.10.350 180 257 3.9E-37 T 12-10-2018 K04M3_28210 19edfec04a05a909f4d9a269143c74cc 298 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-40 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Pfam PF00672 HAMP domain 362 410 8.0E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SMART SM00304 360 413 7.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SUPERFAMILY SSF52172 701 826 1.17E-40 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SUPERFAMILY SSF55874 499 670 5.37E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SMART SM00448 705 818 3.3E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Gene3D G3DSA:3.30.450.20 835 936 6.8E-8 T 12-10-2018 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Gene3D G3DSA:1.10.8.500 359 409 4.1E-15 T 12-10-2018 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Gene3D G3DSA:3.40.50.2300 693 834 4.6E-40 T 12-10-2018 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Gene3D G3DSA:3.30.450.20 252 341 3.9E-8 T 12-10-2018 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SMART SM00388 442 510 2.8E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Gene3D G3DSA:1.10.287.130 410 508 1.6E-22 T 12-10-2018 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Gene3D G3DSA:3.30.565.10 509 672 1.8E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SUPERFAMILY SSF47384 427 510 1.22E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Pfam PF00512 His Kinase A (phospho-acceptor) domain 443 508 1.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SUPERFAMILY SSF158472 361 412 1.96E-9 T 12-10-2018 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SMART SM00387 556 667 2.2E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 606 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 645 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 620 2.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Pfam PF00989 PAS fold 859 907 5.6E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Pfam PF00072 Response regulator receiver domain 709 819 1.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SUPERFAMILY SSF55785 843 910 3.84E-8 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 SMART SM00091 856 921 1.2E-5 T 12-10-2018 IPR000014 PAS domain K04M3_25860 8563c08a0e8061c4891ae49af3410249 1111 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 666 9.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 SUPERFAMILY SSF46894 151 213 2.24E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 Gene3D G3DSA:1.10.10.10 149 215 1.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 SMART SM00421 154 211 8.7E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35440 679251e3e8eb8d0ea2470b0e26b48538 222 Gene3D G3DSA:3.40.50.2300 6 146 5.8E-35 T 12-10-2018 K04M3_06530 937c815bc5fcbd5c81b258cdb74828e9 129 Gene3D G3DSA:3.30.310.230 2 128 9.9E-46 T 12-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 K04M3_06530 937c815bc5fcbd5c81b258cdb74828e9 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.408 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 K04M3_06530 937c815bc5fcbd5c81b258cdb74828e9 129 Pfam PF07417 Transcriptional regulator Crl 6 123 9.7E-50 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 K04M3_49580 e8ca716df1fb67a10af03760040864d5 310 Gene3D G3DSA:3.40.50.300 3 305 3.7E-80 T 12-10-2018 K04M3_49580 e8ca716df1fb67a10af03760040864d5 310 SUPERFAMILY SSF52540 5 254 2.21E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_49580 e8ca716df1fb67a10af03760040864d5 310 Pfam PF00005 ABC transporter 30 184 8.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_49580 e8ca716df1fb67a10af03760040864d5 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_49580 e8ca716df1fb67a10af03760040864d5 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 4.3E-8 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_49580 e8ca716df1fb67a10af03760040864d5 310 SMART SM00382 39 233 6.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.7E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 Pfam PF13377 Periplasmic binding protein-like domain 168 325 1.8E-30 T 12-10-2018 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 Gene3D G3DSA:1.10.260.40 1 54 1.2E-22 T 12-10-2018 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 SMART SM00354 1 71 5.7E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 Gene3D G3DSA:3.40.50.2300 160 289 3.5E-67 T 12-10-2018 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 Gene3D G3DSA:3.40.50.2300 55 304 3.5E-67 T 12-10-2018 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 SUPERFAMILY SSF47413 2 59 1.13E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_27630 7b0ad2c94cb0ea962c59338414d126b9 332 SUPERFAMILY SSF53822 61 326 5.78E-68 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_21200 d383dbff712b2b6dc69137728113af15 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 6.2E-58 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 K04M3_21200 d383dbff712b2b6dc69137728113af15 201 Gene3D G3DSA:3.40.50.300 11 201 1.3E-69 T 12-10-2018 K04M3_21200 d383dbff712b2b6dc69137728113af15 201 SUPERFAMILY SSF52540 12 201 2.26E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21200 d383dbff712b2b6dc69137728113af15 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 K04M3_21200 d383dbff712b2b6dc69137728113af15 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.3E-68 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 K04M3_21200 d383dbff712b2b6dc69137728113af15 201 PIRSF PIRSF015617 6 201 1.1E-65 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 Gene3D G3DSA:3.30.1340.10 1 85 1.0E-32 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 SUPERFAMILY SSF55594 1 82 2.09E-26 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.8E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.7E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.7E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.7E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.1E-28 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_07850 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site K04M3_34640 d257c7a49a0f2ef8987aca9b68cf9379 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 5.6E-28 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 K04M3_34640 d257c7a49a0f2ef8987aca9b68cf9379 146 Pfam PF02050 Flagellar FliJ protein 23 134 8.2E-7 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 K04M3_43090 666dc6a23b94b2cec5b529871ecd67b2 576 Gene3D G3DSA:3.40.50.410 97 281 1.8E-26 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_43090 666dc6a23b94b2cec5b529871ecd67b2 576 Pfam PF13519 von Willebrand factor type A domain 102 207 5.3E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_43090 666dc6a23b94b2cec5b529871ecd67b2 576 SUPERFAMILY SSF53300 99 272 1.84E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_43090 666dc6a23b94b2cec5b529871ecd67b2 576 SMART SM00327 99 277 0.0066 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 4.6E-267 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.891 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 SUPERFAMILY SSF53732 1 465 3.14E-167 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 9.4E-162 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 Gene3D G3DSA:3.30.499.20 4 286 1.7E-100 T 12-10-2018 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_03470 6aa5a50555e2ec8b71b4da59ca23e11a 466 Gene3D G3DSA:3.30.499.10 327 466 2.0E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 K04M3_03980 f3e1fb7a831ec0c6bed4fb49ee50d8df 216 Gene3D G3DSA:3.90.79.10 1 208 1.0E-63 T 12-10-2018 K04M3_03980 f3e1fb7a831ec0c6bed4fb49ee50d8df 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 3.2E-65 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 K04M3_03980 f3e1fb7a831ec0c6bed4fb49ee50d8df 216 SUPERFAMILY SSF55811 8 206 1.35E-45 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_03980 f3e1fb7a831ec0c6bed4fb49ee50d8df 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_03980 f3e1fb7a831ec0c6bed4fb49ee50d8df 216 Pfam PF00293 NUDIX domain 57 175 4.0E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_21080 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 12-10-2018 IPR036736 ACP-like superfamily K04M3_21080 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain K04M3_21080 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site K04M3_21080 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 12-10-2018 IPR036736 ACP-like superfamily K04M3_21080 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 K04M3_21080 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 SUPERFAMILY SSF52540 73 357 1.2E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 SMART SM00490 257 338 6.3E-27 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 Gene3D G3DSA:3.30.70.330 389 458 5.2E-18 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 Gene3D G3DSA:3.40.50.300 2 210 2.1E-74 T 12-10-2018 K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 Pfam PF03880 DbpA RNA binding domain 386 456 6.7E-22 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 5.1E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 1.2E-27 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 SMART SM00487 23 225 8.1E-58 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_02940 a1454dd9f8e98345a4f85a67e8340107 459 Gene3D G3DSA:3.40.50.300 211 388 9.9E-45 T 12-10-2018 K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.7E-119 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.9E-56 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.423 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 Gene3D G3DSA:3.40.640.10 49 253 2.5E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 SUPERFAMILY SSF53383 9 343 1.79E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_11120 dbd3373d70a6b64aea3b9ea48ecf6787 346 Gene3D G3DSA:3.90.1150.10 4 336 2.5E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 Pfam PF00318 Ribosomal protein S2 9 224 3.3E-94 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 SUPERFAMILY SSF52313 6 232 1.31E-95 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.134 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.1E-108 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 Gene3D G3DSA:1.10.287.610 103 150 2.9E-92 T 12-10-2018 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.4E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.4E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.4E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.4E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.4E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.4E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 Gene3D G3DSA:3.40.50.10490 8 219 2.9E-92 T 12-10-2018 K04M3_24000 ca025d5e217bc8065f1c3bf42e5c02cf 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 K04M3_43780 ced1d01a7352aca921c443d6a00aaea7 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 2.8E-139 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_43780 ced1d01a7352aca921c443d6a00aaea7 497 Gene3D G3DSA:3.40.605.10 24 458 6.3E-143 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_43780 ced1d01a7352aca921c443d6a00aaea7 497 SUPERFAMILY SSF53720 2 483 3.67E-145 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_43780 ced1d01a7352aca921c443d6a00aaea7 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_43780 ced1d01a7352aca921c443d6a00aaea7 497 Gene3D G3DSA:3.40.309.10 250 450 6.3E-143 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_43780 ced1d01a7352aca921c443d6a00aaea7 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 3.3E-242 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 K04M3_26160 4b73849013db2fb4f47ff73e1b92a4d9 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_26160 4b73849013db2fb4f47ff73e1b92a4d9 305 Gene3D G3DSA:3.40.50.300 1 240 1.1E-64 T 12-10-2018 K04M3_26160 4b73849013db2fb4f47ff73e1b92a4d9 305 SMART SM00382 29 213 2.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_26160 4b73849013db2fb4f47ff73e1b92a4d9 305 SUPERFAMILY SSF52540 3 229 4.49E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26160 4b73849013db2fb4f47ff73e1b92a4d9 305 Pfam PF00005 ABC transporter 20 164 2.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_37900 e9cc59d465b93f77e6cf1d7882b75ee9 226 Pfam PF01575 MaoC like domain 83 201 2.4E-22 T 12-10-2018 IPR002539 MaoC-like dehydratase domain K04M3_37900 e9cc59d465b93f77e6cf1d7882b75ee9 226 SUPERFAMILY SSF54637 76 221 7.46E-31 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_37900 e9cc59d465b93f77e6cf1d7882b75ee9 226 Gene3D G3DSA:3.10.129.10 75 225 4.9E-36 T 12-10-2018 K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 SUPERFAMILY SSF52540 68 351 1.82E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 SMART SM00490 250 331 3.5E-27 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 Gene3D G3DSA:3.40.50.300 199 362 7.5E-43 T 12-10-2018 K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 Gene3D G3DSA:3.40.50.300 1 198 5.7E-66 T 12-10-2018 K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 4.2E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 6.3E-25 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_32800 21164b79c7db44e2a15900d5ebd94c4f 412 SMART SM00487 19 212 4.7E-47 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_35920 975e02c8841d919252875b02027485ea 524 SUPERFAMILY SSF161098 273 514 2.88E-57 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35920 975e02c8841d919252875b02027485ea 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 513 1.9E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_35920 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:3.10.650.10 108 278 5.9E-52 T 12-10-2018 K04M3_35920 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:2.40.430.10 128 214 5.9E-52 T 12-10-2018 K04M3_35920 975e02c8841d919252875b02027485ea 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 3.8E-60 T 12-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain K04M3_35920 975e02c8841d919252875b02027485ea 524 SUPERFAMILY SSF160964 24 270 1.7E-83 T 12-10-2018 K04M3_35920 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:1.10.3720.10 280 523 2.5E-68 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35920 975e02c8841d919252875b02027485ea 524 Gene3D G3DSA:1.20.58.370 16 105 1.0E-33 T 12-10-2018 IPR035277 MalF, N-terminal K04M3_38090 7d421629a8a8b7d615a26a67c122afce 419 SUPERFAMILY SSF51261 138 386 1.31E-64 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_38090 7d421629a8a8b7d615a26a67c122afce 419 Gene3D G3DSA:3.10.450.350 155 259 1.7E-36 T 12-10-2018 K04M3_38090 7d421629a8a8b7d615a26a67c122afce 419 Pfam PF01551 Peptidase family M23 291 384 6.2E-31 T 12-10-2018 IPR016047 Peptidase M23 K04M3_38090 7d421629a8a8b7d615a26a67c122afce 419 Pfam PF04225 Opacity-associated protein A LysM-like domain 69 150 5.3E-7 T 12-10-2018 IPR007340 Opacity-associated protein A K04M3_38090 7d421629a8a8b7d615a26a67c122afce 419 Gene3D G3DSA:2.70.70.10 260 391 2.6E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_38090 7d421629a8a8b7d615a26a67c122afce 419 Gene3D G3DSA:3.10.450.350 63 154 4.4E-35 T 12-10-2018 K04M3_31540 0ba9deeffe58208b73b79b925d0892d5 305 SUPERFAMILY SSF103481 51 147 1.44E-13 T 12-10-2018 K04M3_31540 0ba9deeffe58208b73b79b925d0892d5 305 TIGRFAM TIGR00688 rarD: protein RarD 12 265 7.1E-88 T 12-10-2018 IPR004626 RarD protein GO:0005887 K04M3_31540 0ba9deeffe58208b73b79b925d0892d5 305 Pfam PF00892 EamA-like transporter family 13 146 7.4E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_31540 0ba9deeffe58208b73b79b925d0892d5 305 SUPERFAMILY SSF103481 207 292 1.96E-7 T 12-10-2018 K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 Gene3D G3DSA:3.20.20.80 284 629 3.1E-120 T 12-10-2018 K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 Gene3D G3DSA:2.60.120.260 4 190 2.5E-48 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 SUPERFAMILY SSF49785 2 188 7.99E-49 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 SUPERFAMILY SSF49303 734 801 2.73E-7 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 SUPERFAMILY SSF49303 193 285 1.21E-13 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 SUPERFAMILY SSF51445 283 631 3.77E-101 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_46380 c897a1b9167877fa24bc7ca76b75e41b 802 Gene3D G3DSA:2.60.40.10 196 283 1.0E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_14710 c3ebded125ac3495700d0897cc0a2d5b 521 Pfam PF14707 C-terminal region of aryl-sulfatase 391 487 2.6E-7 T 12-10-2018 K04M3_14710 c3ebded125ac3495700d0897cc0a2d5b 521 SUPERFAMILY SSF53649 23 475 5.52E-121 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_14710 c3ebded125ac3495700d0897cc0a2d5b 521 Pfam PF00884 Sulfatase 27 353 2.6E-65 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_14710 c3ebded125ac3495700d0897cc0a2d5b 521 Gene3D G3DSA:3.30.1120.10 394 427 3.2E-99 T 12-10-2018 K04M3_14710 c3ebded125ac3495700d0897cc0a2d5b 521 Gene3D G3DSA:3.40.720.10 27 393 3.2E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 Pfam PF00459 Inositol monophosphatase family 7 253 7.9E-51 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 SUPERFAMILY SSF56655 6 272 3.4E-78 T 12-10-2018 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 Gene3D G3DSA:3.30.540.10 6 161 1.4E-45 T 12-10-2018 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.126 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.1E-106 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 Gene3D G3DSA:3.40.190.80 162 264 1.7E-26 T 12-10-2018 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 4.9E-5 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 4.9E-5 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_01300 ec5763a04614d9961e5c571ce4cd0d0d 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 4.9E-5 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Gene3D G3DSA:2.40.50.180 634 699 1.4E-35 T 12-10-2018 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Pfam PF01584 CheW-like domain 617 746 1.8E-23 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Gene3D G3DSA:1.20.120.160 2 143 5.7E-36 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SUPERFAMILY SSF47226 6 129 1.7E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SUPERFAMILY SSF47384 365 424 7.45E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Gene3D G3DSA:3.30.565.10 424 610 1.3E-55 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Gene3D G3DSA:2.30.30.40 611 740 1.4E-35 T 12-10-2018 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SUPERFAMILY SSF55874 426 609 7.99E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SMART SM00387 468 611 3.7E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 7.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 7.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 7.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 565 7.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SMART SM00260 603 744 3.1E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SUPERFAMILY SSF50341 610 744 1.09E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 610 8.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 364 423 5.3E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SMART SM01231 363 423 3.2E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Pfam PF01627 Hpt domain 8 100 3.7E-16 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 SMART SM00073 6 103 2.2E-19 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_22670 d5a30d2a15a754e455b15bc18231422e 753 Gene3D G3DSA:1.10.287.560 364 423 3.2E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 K04M3_20700 3e19ebbebf806bab1d49590a94abd08d 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 1.0E-29 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_20700 3e19ebbebf806bab1d49590a94abd08d 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_20700 3e19ebbebf806bab1d49590a94abd08d 255 Gene3D G3DSA:3.30.70.20 40 247 6.3E-67 T 12-10-2018 K04M3_20700 3e19ebbebf806bab1d49590a94abd08d 255 SUPERFAMILY SSF54862 47 231 1.47E-66 T 12-10-2018 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 1.2E-178 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 Gene3D G3DSA:1.10.300.10 102 201 2.4E-107 T 12-10-2018 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 5.1E-191 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 SUPERFAMILY SSF52540 3 436 1.7E-179 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 Gene3D G3DSA:3.40.440.10 6 249 2.4E-107 T 12-10-2018 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 219.812 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 Gene3D G3DSA:3.90.170.10 267 438 6.0E-67 T 12-10-2018 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_29460 3de5dfdff42157e12a12467a2e97fdb7 438 SMART SM00788 4 431 0.0 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_15650 37955ae315166eaa19f78ed58c0613a4 175 Pfam PF00877 NlpC/P60 family 68 172 3.3E-31 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain K04M3_15650 37955ae315166eaa19f78ed58c0613a4 175 Gene3D G3DSA:3.90.1720.10 55 175 1.2E-40 T 12-10-2018 K04M3_15650 37955ae315166eaa19f78ed58c0613a4 175 SUPERFAMILY SSF54001 57 173 8.83E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 SUPERFAMILY SSF88659 92 164 1.4E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 Pfam PF04539 Sigma-70 region 3 100 161 2.3E-12 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 PIRSF PIRSF000770 2 243 7.7E-40 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 SUPERFAMILY SSF88659 155 239 8.41E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 7.7E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 63.029 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 Gene3D G3DSA:1.20.140.160 90 239 1.1E-46 T 12-10-2018 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 1.0E-86 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 Gene3D G3DSA:1.10.1740.10 5 88 2.1E-28 T 12-10-2018 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 Pfam PF04542 Sigma-70 region 2 19 91 5.0E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_22700 ed91222b31bbd1c2c5c46119f51ed7b9 244 Pfam PF04545 Sigma-70, region 4 187 234 2.7E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_35040 7d6ce1d5ee50b14f5d1cb71f2bb7efdc 325 Pfam PF02958 Ecdysteroid kinase 170 267 2.7E-10 T 12-10-2018 IPR004119 Protein of unknown function DUF227 K04M3_35040 7d6ce1d5ee50b14f5d1cb71f2bb7efdc 325 SMART SM00587 112 269 0.0018 T 12-10-2018 IPR015897 CHK kinase-like K04M3_35040 7d6ce1d5ee50b14f5d1cb71f2bb7efdc 325 Gene3D G3DSA:3.90.1200.10 122 298 6.7E-8 T 12-10-2018 K04M3_35040 7d6ce1d5ee50b14f5d1cb71f2bb7efdc 325 SUPERFAMILY SSF56112 25 324 2.75E-26 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82714 183 266 1.57E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82714 704 788 1.44E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82866 290 488 8.76E-45 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82693 554 657 2.62E-17 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82866 794 1009 1.7E-49 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.7E-279 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82693 139 324 1.31E-17 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 SUPERFAMILY SSF82693 40 134 7.32E-25 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 12-10-2018 K04M3_09410 ea6915606a5c34ce6d5500852937f29e 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 SUPERFAMILY SSF88659 102 173 2.83E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 Pfam PF04542 Sigma-70 region 2 28 101 1.2E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 SUPERFAMILY SSF88659 162 240 2.09E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.6E-75 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 Pfam PF04545 Sigma-70, region 4 189 236 8.5E-10 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 Gene3D G3DSA:1.20.140.160 99 242 1.9E-32 T 12-10-2018 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 Gene3D G3DSA:1.10.1740.10 13 98 3.8E-17 T 12-10-2018 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 2.2E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_34410 263e9a185307363fe20d79adc3ca77c8 242 SUPERFAMILY SSF88946 22 100 7.06E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 Pfam PF00005 ABC transporter 20 161 5.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 SUPERFAMILY SSF52540 4 244 3.06E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:3.40.50.300 1 238 2.7E-75 T 12-10-2018 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:2.40.50.140 287 344 3.0E-50 T 12-10-2018 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 SMART SM00382 28 210 2.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:2.40.50.100 239 361 3.0E-50 T 12-10-2018 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 Pfam PF08402 TOBE domain 281 353 1.4E-11 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 K04M3_35900 719c8cfae04d17e5d0330a4ddea8d075 372 SUPERFAMILY SSF50331 236 364 4.13E-31 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 PIRSF PIRSF001123 97 190 0.0039 T 12-10-2018 IPR008007 Peptidase M42 K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 PIRSF PIRSF001123 260 368 5.0E-4 T 12-10-2018 IPR008007 Peptidase M42 K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 PIRSF PIRSF001123 6 105 0.28 T 12-10-2018 IPR008007 Peptidase M42 K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 SUPERFAMILY SSF55031 178 289 3.27E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 Pfam PF07687 Peptidase dimerisation domain 183 273 7.2E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 4.2E-155 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 SUPERFAMILY SSF53187 7 366 2.2E-59 T 12-10-2018 K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 Pfam PF01546 Peptidase family M20/M25/M40 73 366 1.1E-18 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 Gene3D G3DSA:3.30.70.360 176 287 1.3E-111 T 12-10-2018 K04M3_13420 d72c8f89762c49cdd72a361bfaf6a57b 368 Gene3D G3DSA:3.40.630.10 16 362 1.3E-111 T 12-10-2018 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.7E-23 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 7.6E-215 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 3.0E-160 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 SMART SM00941 350 424 1.6E-28 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Gene3D G3DSA:3.90.1170.30 337 432 1.7E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.609 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 SUPERFAMILY SSF54680 337 437 1.2E-28 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 SUPERFAMILY SSF52418 73 334 7.2E-89 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Gene3D G3DSA:1.20.970.10 7 195 5.4E-128 T 12-10-2018 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 PIRSF PIRSF000478 1 438 9.3E-149 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 2.6E-48 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25420 c8bd6edfc618279912060a919e0851a6 442 Gene3D G3DSA:3.40.1030.10 70 322 5.4E-128 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 SUPERFAMILY SSF48179 168 290 9.86E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.3E-81 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 Gene3D G3DSA:3.40.50.720 1 166 5.6E-52 T 12-10-2018 K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 Gene3D G3DSA:1.10.1040.10 167 296 8.4E-42 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 1.8E-32 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 3.2E-36 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain K04M3_24820 286243129b942ef165f8f28d0c54bf06 296 SUPERFAMILY SSF51735 2 165 1.28E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 Pfam PF00924 Mechanosensitive ion channel 77 274 5.8E-59 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 SUPERFAMILY SSF82689 187 284 1.27E-34 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 Pfam PF05552 Conserved TM helix 21 69 2.5E-12 T 12-10-2018 IPR008910 Conserved TM helix K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 SUPERFAMILY SSF82861 33 118 1.44E-17 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 K04M3_27100 0e2b5a165c41ba44496f002751fba762 288 Gene3D G3DSA:3.30.70.100 185 279 2.1E-28 T 12-10-2018 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 5.7E-52 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 SUPERFAMILY SSF55021 335 409 2.82E-18 T 12-10-2018 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 Gene3D G3DSA:3.40.50.720 109 297 2.0E-110 T 12-10-2018 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 Gene3D G3DSA:3.30.70.260 328 409 1.1E-32 T 12-10-2018 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 SUPERFAMILY SSF52283 7 136 1.32E-49 T 12-10-2018 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 Gene3D G3DSA:3.40.50.720 14 312 2.0E-110 T 12-10-2018 K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 SUPERFAMILY SSF51735 108 295 7.02E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_27050 d8e2de14dad8609e2bff4b9b2d518959 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 5.8E-39 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 K04M3_12010 5291d94441fa979e09a613d6ac2f3f2e 165 Gene3D G3DSA:3.40.50.2300 1 136 5.1E-18 T 12-10-2018 K04M3_12010 5291d94441fa979e09a613d6ac2f3f2e 165 Pfam PF00072 Response regulator receiver domain 6 125 9.9E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_12010 5291d94441fa979e09a613d6ac2f3f2e 165 SMART SM00448 4 125 2.5E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_12010 5291d94441fa979e09a613d6ac2f3f2e 165 SUPERFAMILY SSF52172 1 141 1.25E-19 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_34360 60be8f62d801ed3449e0d487b4b8152e 125 SUPERFAMILY SSF50729 10 124 2.27E-39 T 12-10-2018 K04M3_34360 60be8f62d801ed3449e0d487b4b8152e 125 Gene3D G3DSA:2.30.29.50 4 125 1.5E-38 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily K04M3_34360 60be8f62d801ed3449e0d487b4b8152e 125 Pfam PF08000 Bacterial PH domain 5 123 6.9E-39 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 PIRSF PIRSF039144 1 112 3.2E-58 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 SUPERFAMILY SSF54913 1 112 3.81E-47 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 SMART SM00938 4 105 1.6E-69 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 83 103 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 52 75 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 23 41 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 PRINTS PR00340 P-II protein signature 2 17 4.7E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-48 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal K04M3_23810 bd88f6dcfef6ac2dba2933eace7893a8 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.2E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 PIRSF PIRSF000164 10 336 5.4E-106 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 SUPERFAMILY SSF51395 1 336 3.66E-108 T 12-10-2018 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.425 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 Gene3D G3DSA:3.20.20.70 2 336 1.6E-143 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.6E-147 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.4E-90 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 K04M3_16320 b24eb90c8ccdd7e08d3eb487356eab09 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 SUPERFAMILY SSF55073 243 390 2.67E-17 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 SUPERFAMILY SSF141868 411 636 4.84E-41 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 Pfam PF00563 EAL domain 411 635 4.6E-40 T 12-10-2018 IPR001633 EAL domain K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 Gene3D G3DSA:3.30.70.270 223 391 2.9E-20 T 12-10-2018 K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 Gene3D G3DSA:3.30.1040.50 102 151 5.9E-18 T 12-10-2018 K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 SMART SM00267 226 392 1.2E-12 T 12-10-2018 IPR000160 GGDEF domain K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 7.9E-40 T 12-10-2018 IPR032244 LapD/MoxY, periplasmic domain K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 3.1E-13 T 12-10-2018 IPR000160 GGDEF domain K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 SMART SM00052 403 635 2.2E-10 T 12-10-2018 IPR001633 EAL domain K04M3_32600 1f444fb28aa534cde8497ceaabb750e8 637 Gene3D G3DSA:3.20.20.450 401 636 1.5E-40 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_42850 77500d03d4149b633c0ea896a59ba847 176 SUPERFAMILY SSF54523 7 55 6.75E-13 T 12-10-2018 K04M3_42850 77500d03d4149b633c0ea896a59ba847 176 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_42850 77500d03d4149b633c0ea896a59ba847 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.0E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_42850 77500d03d4149b633c0ea896a59ba847 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 8.2E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_42850 77500d03d4149b633c0ea896a59ba847 176 Gene3D G3DSA:3.30.700.10 7 90 7.6E-12 T 12-10-2018 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 224.283 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.40.250.10 382 482 3.0E-11 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 SMART SM00981 75 165 5.7E-24 T 12-10-2018 IPR004114 THUMP domain GO:0003723 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 SUPERFAMILY SSF143437 1 173 4.01E-47 T 12-10-2018 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.2E-42 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 SUPERFAMILY SSF52821 402 481 2.1E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.30.2130.30 1 174 1.0E-33 T 12-10-2018 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 Gene3D G3DSA:3.40.50.620 175 381 1.3E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 SUPERFAMILY SSF52402 174 372 4.41E-42 T 12-10-2018 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-72 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 7.6E-114 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 K04M3_06690 36cbfa9244a394a7f6cd5998b87778a5 482 Pfam PF02926 THUMP domain 44 158 2.3E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:2.30.130.40 1 116 1.6E-35 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 SMART SM00382 347 491 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.5E-40 T 12-10-2018 IPR003111 Lon, substrate-binding domain K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 SMART SM00464 10 201 3.7E-77 T 12-10-2018 IPR003111 Lon, substrate-binding domain K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 SUPERFAMILY SSF52540 312 586 1.93E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:1.20.58.1480 119 244 3.3E-44 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 6.0E-100 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 PIRSF PIRSF001174 1 774 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.014 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:3.30.230.10 584 771 7.5E-86 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.1E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:3.40.50.300 312 489 7.7E-61 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 SUPERFAMILY SSF88697 10 200 1.91E-48 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 SUPERFAMILY SSF54211 594 769 2.05E-59 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 4.3E-56 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 4.3E-56 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 4.3E-56 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 4.3E-56 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 4.3E-56 T 12-10-2018 K04M3_09140 5fccb5525edd35edcca03b3fc7c99c64 783 Gene3D G3DSA:1.10.8.60 490 583 5.6E-34 T 12-10-2018 K04M3_35130 4dc606c137a0e941c40b0f791af9af88 376 Gene3D G3DSA:1.10.287.470 96 219 9.5E-35 T 12-10-2018 K04M3_35130 4dc606c137a0e941c40b0f791af9af88 376 SUPERFAMILY SSF111369 63 114 4.71E-6 T 12-10-2018 K04M3_35130 4dc606c137a0e941c40b0f791af9af88 376 Gene3D G3DSA:2.40.50.100 64 256 9.5E-35 T 12-10-2018 K04M3_35130 4dc606c137a0e941c40b0f791af9af88 376 Pfam PF13533 Biotin-lipoyl like 63 111 2.7E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_35130 4dc606c137a0e941c40b0f791af9af88 376 Gene3D G3DSA:2.40.30.170 257 306 9.5E-35 T 12-10-2018 K04M3_51150 9896b48b775903c7dbe2529e3467ad4f 470 SUPERFAMILY SSF52540 147 452 8.51E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_51150 9896b48b775903c7dbe2529e3467ad4f 470 Gene3D G3DSA:3.40.50.300 222 468 1.4E-49 T 12-10-2018 K04M3_51150 9896b48b775903c7dbe2529e3467ad4f 470 Pfam PF00437 Type II/IV secretion system protein 232 385 7.9E-24 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.8E-136 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:3.30.1360.40 240 333 3.5E-180 T 12-10-2018 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 SMART SM00434 13 463 1.1E-233 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:3.90.199.10 34 483 3.5E-180 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 SUPERFAMILY SSF56719 33 485 3.01E-156 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:2.120.10.90 502 745 1.9E-14 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Gene3D G3DSA:1.10.268.10 371 456 3.5E-180 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 SUPERFAMILY SSF101904 499 743 5.1E-51 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 12-10-2018 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.19 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 K04M3_04030 5e6b3a1c68a0c221550016147dfb288b 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.903 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_15920 d617143a4e46c313a5a247d6e7644a01 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 4.6E-83 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 K04M3_15920 d617143a4e46c313a5a247d6e7644a01 350 SUPERFAMILY SSF81342 119 333 3.14E-46 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 K04M3_15920 d617143a4e46c313a5a247d6e7644a01 350 Gene3D G3DSA:1.20.950.20 118 336 4.1E-65 T 12-10-2018 K04M3_15920 d617143a4e46c313a5a247d6e7644a01 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.1E-25 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 K04M3_46420 52de51baf2a825cbddf590767e775dbf 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 215 1.1E-13 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 K04M3_46420 52de51baf2a825cbddf590767e775dbf 274 SUPERFAMILY SSF53649 2 259 1.96E-49 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_46420 52de51baf2a825cbddf590767e775dbf 274 Gene3D G3DSA:3.40.720.10 3 272 5.6E-31 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 Gene3D G3DSA:3.40.190.10 109 206 3.5E-68 T 12-10-2018 K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 SMART SM00062 23 250 6.8E-58 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 SUPERFAMILY SSF53850 4 251 2.45E-62 T 12-10-2018 K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 248 2.2E-54 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 Gene3D G3DSA:3.40.190.10 28 247 3.5E-68 T 12-10-2018 K04M3_16790 eada730f076577f6d63ebd4708238b3c 253 SMART SM00079 23 249 3.6E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 Gene3D G3DSA:2.40.10.10 34 254 2.3E-58 T 12-10-2018 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 Pfam PF02839 Carbohydrate binding domain 407 432 5.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 SMART SM00020 33 260 3.7E-58 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site K04M3_17010 4abda108ec66f579cdc75959406335ef 443 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 Gene3D G3DSA:2.60.40.10 275 390 2.2E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_17010 4abda108ec66f579cdc75959406335ef 443 SUPERFAMILY SSF50494 11 265 8.56E-61 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_17010 4abda108ec66f579cdc75959406335ef 443 SUPERFAMILY SSF51055 388 436 4.97E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 Gene3D G3DSA:2.40.10.10 46 255 2.3E-58 T 12-10-2018 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 Pfam PF00089 Trypsin 34 259 1.0E-46 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 Gene3D G3DSA:2.10.10.20 391 433 3.0E-16 T 12-10-2018 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 1.2E-11 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 1.2E-11 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 1.2E-11 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_17010 4abda108ec66f579cdc75959406335ef 443 SMART SM00495 390 435 9.2E-11 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_31260 aee754ca02d190d51623fa681e1b0921 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 2.1E-68 T 12-10-2018 IPR007435 Protein of unknown function DUF484 K04M3_31260 aee754ca02d190d51623fa681e1b0921 234 Gene3D G3DSA:3.30.450.40 43 218 7.6E-36 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 Gene3D G3DSA:2.40.50.140 1 88 4.6E-29 T 12-10-2018 K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 SUPERFAMILY SSF53335 77 438 9.5E-85 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 Gene3D G3DSA:3.40.1350.30 135 271 4.2E-116 T 12-10-2018 K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 63.498 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 SUPERFAMILY SSF50249 18 74 2.63E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 Gene3D G3DSA:3.40.50.150 89 433 4.2E-116 T 12-10-2018 K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 Pfam PF01938 TRAM domain 17 68 2.1E-8 T 12-10-2018 IPR002792 TRAM domain K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 8.5E-33 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site K04M3_26800 0f5e919990d7aa268abd732bc1a2f2a6 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.3E-127 T 12-10-2018 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 Gene3D G3DSA:3.40.50.2300 65 309 9.3E-63 T 12-10-2018 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 Gene3D G3DSA:1.10.260.40 1 58 8.9E-23 T 12-10-2018 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 SMART SM00354 1 71 3.6E-38 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 SUPERFAMILY SSF53822 58 316 5.97E-59 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 2.8E-26 T 12-10-2018 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 SUPERFAMILY SSF47413 1 60 6.22E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 K04M3_45920 715536439c26a2b77ffcc7b5521ee96b 328 Gene3D G3DSA:3.40.50.2300 164 286 9.3E-63 T 12-10-2018 K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 Gene3D G3DSA:1.10.10.200 1 81 3.0E-35 T 12-10-2018 IPR017856 Integrase-like, N-terminal K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 4.7E-103 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 SUPERFAMILY SSF75625 3 245 1.7E-95 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 Pfam PF01709 Transcriptional regulator 5 236 4.7E-94 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.671 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 Gene3D G3DSA:3.30.70.980 85 236 4.5E-57 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_10350 a0dd946d1bbd0f48bda738c7db2d4b9b 248 Gene3D G3DSA:3.30.70.980 130 205 4.5E-57 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_27150 502dd700d1358e01dc9f0f74738880a0 297 Gene3D G3DSA:1.10.10.10 1 90 1.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_27150 502dd700d1358e01dc9f0f74738880a0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_27150 502dd700d1358e01dc9f0f74738880a0 297 SUPERFAMILY SSF46785 2 112 5.05E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_27150 502dd700d1358e01dc9f0f74738880a0 297 SUPERFAMILY SSF53850 87 293 2.17E-28 T 12-10-2018 K04M3_27150 502dd700d1358e01dc9f0f74738880a0 297 Pfam PF03466 LysR substrate binding domain 88 290 7.2E-22 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_27150 502dd700d1358e01dc9f0f74738880a0 297 Gene3D G3DSA:3.40.190.290 91 290 1.1E-30 T 12-10-2018 K04M3_38970 9692b97006153ae0a4e0b4739de21ca5 716 SUPERFAMILY SSF56112 90 338 5.4E-56 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_38970 9692b97006153ae0a4e0b4739de21ca5 716 Gene3D G3DSA:1.10.510.10 180 342 3.9E-33 T 12-10-2018 K04M3_38970 9692b97006153ae0a4e0b4739de21ca5 716 Pfam PF00069 Protein kinase domain 93 325 3.5E-39 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 K04M3_38970 9692b97006153ae0a4e0b4739de21ca5 716 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 220 232 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 K04M3_38970 9692b97006153ae0a4e0b4739de21ca5 716 SMART SM00220 93 364 3.5E-34 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 K04M3_38970 9692b97006153ae0a4e0b4739de21ca5 716 Gene3D G3DSA:3.30.200.20 81 178 1.7E-25 T 12-10-2018 K04M3_16530 6246ac285dcd63448acf3d07f222a701 249 SUPERFAMILY SSF52540 8 242 3.27E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16530 6246ac285dcd63448acf3d07f222a701 249 Gene3D G3DSA:3.40.50.300 6 249 1.0E-79 T 12-10-2018 K04M3_16530 6246ac285dcd63448acf3d07f222a701 249 PIRSF PIRSF039085 5 248 8.7E-111 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 K04M3_16530 6246ac285dcd63448acf3d07f222a701 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_16530 6246ac285dcd63448acf3d07f222a701 249 SMART SM00382 33 220 2.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_16530 6246ac285dcd63448acf3d07f222a701 249 Pfam PF00005 ABC transporter 24 172 5.3E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_07630 e5ba7d99ba6ae116ab9a9f17fbf09426 141 SUPERFAMILY SSF140566 1 113 4.32E-23 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 K04M3_07630 e5ba7d99ba6ae116ab9a9f17fbf09426 141 Pfam PF05130 FlgN protein 2 131 2.2E-25 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 K04M3_07630 e5ba7d99ba6ae116ab9a9f17fbf09426 141 Gene3D G3DSA:1.20.58.300 1 113 3.1E-8 T 12-10-2018 K04M3_14940 32f1afa5ada9104bd9049baa007c96c0 157 Pfam PF00072 Response regulator receiver domain 6 125 9.9E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_14940 32f1afa5ada9104bd9049baa007c96c0 157 Gene3D G3DSA:3.40.50.2300 1 135 6.6E-20 T 12-10-2018 K04M3_14940 32f1afa5ada9104bd9049baa007c96c0 157 SUPERFAMILY SSF52172 1 131 2.7E-20 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_14940 32f1afa5ada9104bd9049baa007c96c0 157 SMART SM00448 4 125 6.5E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 SUPERFAMILY SSF53448 4 358 2.35E-70 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.516 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 6.9E-154 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.4E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 Gene3D G3DSA:3.90.550.10 2 286 8.5E-84 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_10130 33b60552be5c38ac5bc9750d60826589 405 Gene3D G3DSA:2.160.10.10 287 403 8.7E-33 T 12-10-2018 K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 Gene3D G3DSA:3.90.180.10 13 329 3.5E-75 T 12-10-2018 K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 Gene3D G3DSA:3.40.50.720 154 289 3.5E-75 T 12-10-2018 K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 SUPERFAMILY SSF50129 11 176 1.98E-33 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 SUPERFAMILY SSF51735 143 306 2.12E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 104 4.9E-11 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 SMART SM00829 12 341 0.0021 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_46140 86efe38e3a666c4605c161b36f1d68da 352 Pfam PF00107 Zinc-binding dehydrogenase 177 304 2.3E-17 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 Gene3D G3DSA:3.30.470.30 52 152 1.7E-55 T 12-10-2018 K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 Pfam PF14743 DNA ligase OB-like domain 213 278 3.7E-26 T 12-10-2018 IPR029319 DNA ligase, OB-like domain K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 Gene3D G3DSA:2.40.50.140 199 281 5.7E-8 T 12-10-2018 K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 Gene3D G3DSA:3.30.1490.70 32 191 1.7E-55 T 12-10-2018 K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 SUPERFAMILY SSF56091 25 199 1.99E-40 T 12-10-2018 K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 SUPERFAMILY SSF50249 174 278 8.0E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 Pfam PF01068 ATP dependent DNA ligase domain 46 199 9.1E-7 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 K04M3_15560 9e0385e0504b4f68e6b08441ca372539 281 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 176 199 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 K04M3_08060 44edeea4d7ef9f6cd739c280e0004428 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.5E-103 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 K04M3_08060 44edeea4d7ef9f6cd739c280e0004428 304 Gene3D G3DSA:3.40.50.720 2 303 3.3E-76 T 12-10-2018 K04M3_08060 44edeea4d7ef9f6cd739c280e0004428 304 SUPERFAMILY SSF51735 1 299 2.2E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08060 44edeea4d7ef9f6cd739c280e0004428 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 8.0E-16 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 K04M3_08060 44edeea4d7ef9f6cd739c280e0004428 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 1.1E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PIRSF PIRSF002560 1 157 8.0E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Pfam PF00210 Ferritin-like domain 8 143 9.7E-41 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.1E-82 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 23 43 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 86 106 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 44 64 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 107 127 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 3 22 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 65 85 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 128 149 6.3E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 SUPERFAMILY SSF47240 1 153 6.67E-56 T 12-10-2018 IPR009078 Ferritin-like superfamily K04M3_29080 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Gene3D G3DSA:1.20.1260.10 1 158 5.1E-72 T 12-10-2018 IPR012347 Ferritin-like K04M3_07990 70a3281ea5f6b55111389766522cedad 259 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 252 1.5E-67 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ K04M3_07990 70a3281ea5f6b55111389766522cedad 259 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 249 3.1E-44 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ K04M3_07990 70a3281ea5f6b55111389766522cedad 259 Gene3D G3DSA:3.40.50.300 1 258 5.4E-27 T 12-10-2018 K04M3_07990 70a3281ea5f6b55111389766522cedad 259 SUPERFAMILY SSF52540 1 250 4.56E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 PIRSF PIRSF001423 1 563 1.2E-294 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 6.1E-291 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 Gene3D G3DSA:3.40.50.10730 147 351 2.0E-258 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 Pfam PF17392 Urocanase C-terminal domain 354 548 9.5E-92 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 Gene3D G3DSA:3.40.1770.10 22 544 2.0E-258 T 12-10-2018 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.0E-62 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 SUPERFAMILY SSF111326 11 557 7.98E-260 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 3.9E-84 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.347 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12300 1e234f140119ebde17ff6a2aba8cc2e5 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 SUPERFAMILY SSF53807 34 284 1.84E-45 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 Pfam PF01497 Periplasmic binding protein 36 252 3.4E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 Gene3D G3DSA:3.40.50.1980 30 119 2.0E-22 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 52 70 1.0E-19 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 181 196 1.0E-19 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 83 98 1.0E-19 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 269 282 1.0E-19 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 205 223 1.0E-19 T 12-10-2018 K04M3_15090 3210d3397ea8cbc112d5b41fd6f22473 294 Gene3D G3DSA:3.40.50.1980 122 288 2.5E-49 T 12-10-2018 K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 Gene3D G3DSA:3.30.70.250 125 197 3.9E-107 T 12-10-2018 K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 Pfam PF00698 Acyl transferase domain 7 291 3.3E-38 T 12-10-2018 IPR014043 Acyl transferase K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.3E-125 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 SUPERFAMILY SSF55048 128 197 6.15E-18 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 PIRSF PIRSF000446 1 307 1.6E-134 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.0E-44 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 Gene3D G3DSA:3.40.366.10 7 286 3.9E-107 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 K04M3_21100 9173f5c1abd885da0b9107dd25b8b9c1 307 SUPERFAMILY SSF52151 4 305 3.14E-82 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.639 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:2.40.50.140 1 114 1.4E-49 T 12-10-2018 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.8E-55 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 SUPERFAMILY SSF50104 127 272 1.14E-60 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 PIRSF PIRSF002158 13 274 8.4E-99 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 SUPERFAMILY SSF50249 2 125 3.77E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-32 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 SMART SM01383 42 118 9.5E-44 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:4.10.950.10 196 274 1.5E-35 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 7.9E-129 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 K04M3_02660 599e1418f6d19132501fc30f48683fb5 274 SMART SM01382 124 252 5.5E-91 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 SUPERFAMILY SSF48435 30 478 1.12E-128 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 Gene3D G3DSA:1.10.530.10 474 645 2.2E-49 T 12-10-2018 K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 Gene3D G3DSA:1.10.1240.20 405 473 1.1E-20 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 Pfam PF01464 Transglycosylase SLT domain 486 597 2.9E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 SUPERFAMILY SSF53955 481 640 4.93E-48 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 Gene3D G3DSA:1.25.20.10 30 391 3.5E-100 T 12-10-2018 K04M3_05190 0daaeb3b2f231a18f1b740d432696acf 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 408 473 6.0E-23 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 K04M3_38880 d07874aa19fbba8e7988ceaa77996c86 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 106 5.1E-34 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 K04M3_38880 d07874aa19fbba8e7988ceaa77996c86 111 SUPERFAMILY SSF50022 5 106 1.9E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_38880 d07874aa19fbba8e7988ceaa77996c86 111 Gene3D G3DSA:2.102.10.10 1 111 6.8E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_38880 d07874aa19fbba8e7988ceaa77996c86 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 4.2E-33 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 2.3E-90 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 Pfam PF03193 RsgA GTPase 100 277 9.1E-57 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 SUPERFAMILY SSF52540 114 338 9.22E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 Gene3D G3DSA:2.40.50.140 36 102 6.8E-22 T 12-10-2018 K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 Gene3D G3DSA:3.40.50.300 103 276 8.6E-50 T 12-10-2018 K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 Gene3D G3DSA:1.10.40.50 277 351 1.8E-25 T 12-10-2018 K04M3_29710 30a119c7f8b9512ec74b7a665ec2c50e 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 341 37.728 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 Gene3D G3DSA:3.40.50.2300 5 134 2.7E-22 T 12-10-2018 K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 SMART SM00052 137 379 2.8E-62 T 12-10-2018 IPR001633 EAL domain K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 Pfam PF00563 EAL domain 147 374 2.1E-64 T 12-10-2018 IPR001633 EAL domain K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 Pfam PF00072 Response regulator receiver domain 7 120 4.2E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 SMART SM00448 5 121 3.8E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 SUPERFAMILY SSF141868 144 382 1.1E-71 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 SUPERFAMILY SSF52172 4 133 9.25E-22 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_42910 230af61199146dbe5feab14f1055c1c4 388 Gene3D G3DSA:3.20.20.450 137 382 4.0E-74 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 Pfam PF00593 TonB dependent receptor 235 666 1.5E-40 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 668 1.5E-84 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 137 5.4E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 SUPERFAMILY SSF56935 36 668 8.24E-86 T 12-10-2018 K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 Gene3D G3DSA:2.170.130.10 42 149 3.8E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_43310 7e955c922466380447ecd42ca8c6445d 668 Gene3D G3DSA:2.40.170.20 151 668 5.8E-109 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_36240 07b9c0ba578a0ebf57f996659ce1a953 434 PIRSF PIRSF006603 4 433 6.6E-50 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_36240 07b9c0ba578a0ebf57f996659ce1a953 434 Pfam PF01554 MatE 14 174 1.3E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_36240 07b9c0ba578a0ebf57f996659ce1a953 434 Pfam PF01554 MatE 244 396 2.6E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_36240 07b9c0ba578a0ebf57f996659ce1a953 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 408 7.1E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 PIRSF PIRSF037215 1 408 1.6E-182 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 Gene3D G3DSA:3.40.630.10 4 400 1.6E-174 T 12-10-2018 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 Pfam PF07687 Peptidase dimerisation domain 206 303 7.4E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 4.1E-12 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 SUPERFAMILY SSF53187 1 406 4.37E-80 T 12-10-2018 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 SUPERFAMILY SSF55031 209 320 6.98E-40 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.398 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 Gene3D G3DSA:3.30.70.360 209 319 1.6E-174 T 12-10-2018 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 5.2E-162 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 K04M3_45010 b1daff3a360fd397a32a9082d9ccd67d 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 K04M3_08710 fca55988ea4fd859751296a00d5c2d95 323 Gene3D G3DSA:1.10.8.350 35 199 3.2E-93 T 12-10-2018 K04M3_08710 fca55988ea4fd859751296a00d5c2d95 323 SUPERFAMILY SSF53955 11 322 1.13E-100 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_08710 fca55988ea4fd859751296a00d5c2d95 323 Gene3D G3DSA:1.10.530.10 66 318 3.2E-93 T 12-10-2018 K04M3_08710 fca55988ea4fd859751296a00d5c2d95 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 2.6E-112 T 12-10-2018 IPR011970 Lytic murein transglycosylase K04M3_08710 fca55988ea4fd859751296a00d5c2d95 323 Pfam PF13406 Transglycosylase SLT domain 24 319 6.6E-111 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 K04M3_38050 1114635a3df9b8e8ab92c242f10e2005 444 Pfam PF01979 Amidohydrolase family 51 424 3.5E-18 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 K04M3_38050 1114635a3df9b8e8ab92c242f10e2005 444 SUPERFAMILY SSF51338 1 434 3.28E-29 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_38050 1114635a3df9b8e8ab92c242f10e2005 444 Gene3D G3DSA:3.20.20.140 56 410 2.8E-132 T 12-10-2018 K04M3_38050 1114635a3df9b8e8ab92c242f10e2005 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_38050 1114635a3df9b8e8ab92c242f10e2005 444 Gene3D G3DSA:2.30.40.10 6 425 2.8E-132 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_38050 1114635a3df9b8e8ab92c242f10e2005 444 SUPERFAMILY SSF51556 55 371 3.74E-89 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 PIRSF PIRSF005303 1 320 6.4E-81 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 Gene3D G3DSA:3.30.1330.10 1 143 9.0E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 2.3E-9 T 12-10-2018 IPR010918 PurM-like, C-terminal domain K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 SUPERFAMILY SSF56042 141 307 2.39E-34 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 SUPERFAMILY SSF55326 3 137 1.3E-32 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 4.9E-103 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.775 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 Gene3D G3DSA:3.90.650.10 144 320 4.7E-49 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_06620 36bbc49f4086ba2b1d6b2beab65894b7 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 3.1E-20 T 12-10-2018 IPR016188 PurM-like, N-terminal domain K04M3_37190 0101617eda96501259174fa3f7d1e3d5 236 Pfam PF03591 AzlC protein 25 163 6.0E-35 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease K04M3_43470 b6bd4c2857cc9bddb91dbd7b615dc563 139 SUPERFAMILY SSF102546 1 139 1.83E-43 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 K04M3_43470 b6bd4c2857cc9bddb91dbd7b615dc563 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.9E-48 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 K04M3_43470 b6bd4c2857cc9bddb91dbd7b615dc563 139 Gene3D G3DSA:3.40.1650.10 8 136 1.7E-37 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 K04M3_43470 b6bd4c2857cc9bddb91dbd7b615dc563 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.183 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 K04M3_28070 d57939509557665a9695e6419288ecec 452 Pfam PF03448 MgtE intracellular N domain 36 137 3.5E-26 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain K04M3_28070 d57939509557665a9695e6419288ecec 452 Gene3D G3DSA:1.10.357.20 277 451 3.9E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain K04M3_28070 d57939509557665a9695e6419288ecec 452 Gene3D G3DSA:1.25.60.10 8 134 7.4E-20 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily K04M3_28070 d57939509557665a9695e6419288ecec 452 SMART SM00924 36 139 7.6E-37 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain K04M3_28070 d57939509557665a9695e6419288ecec 452 SUPERFAMILY SSF54631 138 278 3.41E-26 T 12-10-2018 K04M3_28070 d57939509557665a9695e6419288ecec 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 4.0E-87 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 K04M3_28070 d57939509557665a9695e6419288ecec 452 SUPERFAMILY SSF161093 280 450 1.44E-43 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 K04M3_28070 d57939509557665a9695e6419288ecec 452 Pfam PF00571 CBS domain 140 195 6.8E-4 T 12-10-2018 IPR000644 CBS domain K04M3_28070 d57939509557665a9695e6419288ecec 452 Pfam PF00571 CBS domain 213 257 5.8E-4 T 12-10-2018 IPR000644 CBS domain K04M3_28070 d57939509557665a9695e6419288ecec 452 Gene3D G3DSA:3.10.580.10 135 262 5.6E-37 T 12-10-2018 K04M3_28070 d57939509557665a9695e6419288ecec 452 SUPERFAMILY SSF158791 12 136 2.88E-30 T 12-10-2018 K04M3_28070 d57939509557665a9695e6419288ecec 452 Pfam PF01769 Divalent cation transporter 323 444 2.9E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 K04M3_07390 e176d98682c8431216faf7dae775b757 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.4E-39 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB K04M3_07390 e176d98682c8431216faf7dae775b757 127 PIRSF PIRSF005610 1 121 1.1E-19 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Gene3D G3DSA:3.40.50.300 134 313 6.1E-64 T 12-10-2018 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 SUPERFAMILY SSF52172 3 186 6.12E-37 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Pfam PF00158 Sigma-54 interaction domain 143 308 2.1E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 SUPERFAMILY SSF52540 142 385 1.98E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 SMART SM00382 162 304 2.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 SMART SM00448 3 114 3.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Gene3D G3DSA:1.10.8.60 314 395 1.3E-25 T 12-10-2018 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 SUPERFAMILY SSF46689 451 499 3.76E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Gene3D G3DSA:1.10.10.60 452 495 5.1E-8 T 12-10-2018 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Pfam PF02954 Bacterial regulatory protein, Fis family 458 494 2.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_15490 ccad0d158c33a3b8455c317be03cf002 508 Gene3D G3DSA:3.40.50.2300 1 133 1.4E-30 T 12-10-2018 K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 Gene3D G3DSA:3.40.50.300 285 521 2.3E-35 T 12-10-2018 K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 Gene3D G3DSA:3.40.50.300 2 267 3.5E-39 T 12-10-2018 K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 SUPERFAMILY SSF52540 3 236 6.5E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 SMART SM00382 360 521 3.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 SMART SM00382 28 215 2.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 SUPERFAMILY SSF52540 353 512 1.68E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 Pfam PF00005 ABC transporter 354 480 1.9E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_36520 59bbfb3fdecdd7ce01c81c4b94cc7581 523 Pfam PF00005 ABC transporter 29 170 1.6E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_21330 5c6c7a44cefe895c97c6b328b138aac4 486 SMART SM00267 321 486 3.7E-40 T 12-10-2018 IPR000160 GGDEF domain K04M3_21330 5c6c7a44cefe895c97c6b328b138aac4 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 1.7E-37 T 12-10-2018 IPR000160 GGDEF domain K04M3_21330 5c6c7a44cefe895c97c6b328b138aac4 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 1.3E-42 T 12-10-2018 IPR000160 GGDEF domain K04M3_21330 5c6c7a44cefe895c97c6b328b138aac4 486 SUPERFAMILY SSF55073 337 486 3.37E-36 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_21330 5c6c7a44cefe895c97c6b328b138aac4 486 Gene3D G3DSA:3.30.70.270 319 486 2.4E-45 T 12-10-2018 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 Pfam PF00145 C-5 cytosine-specific DNA methylase 8 349 8.8E-71 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 SUPERFAMILY SSF53335 7 348 5.57E-91 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 Gene3D G3DSA:3.90.120.10 155 336 3.3E-95 T 12-10-2018 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 329 347 - T 12-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 75 87 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 Gene3D G3DSA:3.40.50.150 8 340 3.3E-95 T 12-10-2018 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 347 7.5E-63 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 113 127 3.0E-17 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 3.0E-17 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25050 e787456edf2e88b216fe40e2acdd8d4e 352 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 159 172 3.0E-17 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_01340 a34a1dfd183e9716c2f73be6e14d1e7b 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 45.808 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 K04M3_01340 a34a1dfd183e9716c2f73be6e14d1e7b 255 Gene3D G3DSA:3.40.50.1820 1 254 2.3E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_01340 a34a1dfd183e9716c2f73be6e14d1e7b 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 3.6E-102 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 K04M3_01340 a34a1dfd183e9716c2f73be6e14d1e7b 255 SUPERFAMILY SSF53474 3 252 1.2E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_01340 a34a1dfd183e9716c2f73be6e14d1e7b 255 Pfam PF00561 alpha/beta hydrolase fold 16 241 1.8E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 2.0E-135 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 SUPERFAMILY SSF52402 7 170 1.26E-47 T 12-10-2018 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.717 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 Gene3D G3DSA:3.40.50.620 9 177 3.9E-145 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 SUPERFAMILY SSF69864 177 402 9.03E-88 T 12-10-2018 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 Gene3D G3DSA:3.90.1260.10 68 356 3.9E-145 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.4E-145 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28970 4d285c348191bde7880cfb48a37e7473 404 Gene3D G3DSA:1.20.5.470 368 403 5.0E-8 T 12-10-2018 K04M3_19950 eb9a45db6611d589ca3fa5959676d4b8 93 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 5.1E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 K04M3_19950 eb9a45db6611d589ca3fa5959676d4b8 93 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 K04M3_19950 eb9a45db6611d589ca3fa5959676d4b8 93 Gene3D G3DSA:3.10.20.30 1 90 8.7E-17 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_19950 eb9a45db6611d589ca3fa5959676d4b8 93 SUPERFAMILY SSF54292 3 81 1.57E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_04800 3c595e0cc17b399c61482db0e218760d 579 Gene3D G3DSA:3.10.310.30 325 456 1.9E-30 T 12-10-2018 K04M3_04800 3c595e0cc17b399c61482db0e218760d 579 SUPERFAMILY SSF64182 45 464 7.59E-120 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily K04M3_04800 3c595e0cc17b399c61482db0e218760d 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 2.7E-159 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 K04M3_04800 3c595e0cc17b399c61482db0e218760d 579 Gene3D G3DSA:3.90.1640.30 45 323 2.0E-89 T 12-10-2018 K04M3_04800 3c595e0cc17b399c61482db0e218760d 579 Pfam PF02272 DHHA1 domain 319 451 7.9E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 K04M3_04800 3c595e0cc17b399c61482db0e218760d 579 Pfam PF01368 DHH family 71 205 2.4E-9 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.5E-88 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 SUPERFAMILY SSF48150 5 207 8.32E-71 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.3E-19 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.986 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 SMART SM00478 38 185 8.1E-56 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 Gene3D G3DSA:1.10.340.30 21 132 7.0E-78 T 12-10-2018 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 SMART SM00525 186 206 5.9E-6 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 PIRSF PIRSF001435 1 211 1.0E-49 T 12-10-2018 K04M3_21650 2963d9daf921c116074a2a4bbfecf247 213 Gene3D G3DSA:1.10.1670.10 11 203 7.0E-78 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 SUPERFAMILY SSF51556 1 342 2.17E-146 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 PIRSF PIRSF001237 1 342 5.0E-142 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.553 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 Gene3D G3DSA:3.20.20.140 2 342 5.9E-111 T 12-10-2018 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 5.6E-138 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_36000 51b4c169ae5d65e6c93ae645cea13474 342 Pfam PF01979 Amidohydrolase family 11 315 6.0E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 5.0E-59 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 Gene3D G3DSA:3.30.565.10 413 556 7.5E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 SUPERFAMILY SSF55781 227 351 6.13E-8 T 12-10-2018 K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 Gene3D G3DSA:3.30.450.40 226 352 6.0E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 Pfam PF13492 GAF domain 241 351 7.7E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_05070 c18dc8efd7d86f87b9b0575c4492c08a 556 SUPERFAMILY SSF55874 420 553 3.29E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.1E-44 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 Gene3D G3DSA:2.40.110.10 128 240 5.1E-43 T 12-10-2018 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 PIRSF PIRSF016578 15 102 0.57 T 12-10-2018 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 PIRSF PIRSF016578 141 389 5.3E-11 T 12-10-2018 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.4E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 SUPERFAMILY SSF47203 234 386 7.57E-49 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 SUPERFAMILY SSF56645 6 249 2.49E-82 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 Gene3D G3DSA:1.20.140.10 241 385 8.4E-49 T 12-10-2018 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 Gene3D G3DSA:1.10.540.10 2 127 2.1E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 K04M3_38210 3c9763a9edf44e7f3edfe767279a9dd3 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 124 5.2E-35 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 K04M3_27810 9647d2728c600cd2bc6449e4cf5b96db 266 Gene3D G3DSA:2.60.120.260 26 156 6.1E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_27810 9647d2728c600cd2bc6449e4cf5b96db 266 SUPERFAMILY SSF49785 2 156 2.55E-17 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 Pfam PF00813 FliP family 92 283 2.5E-79 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 1.6E-82 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 3.1E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 3.1E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 3.1E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 3.1E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 3.1E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_22770 fffe904d83add85cab76ede11ddeecd3 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 3.1E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 Gene3D G3DSA:3.90.190.20 300 433 9.1E-40 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 SUPERFAMILY SSF53623 98 297 1.83E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 355 2.8E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 434 3.1E-132 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 Gene3D G3DSA:3.40.50.720 6 96 2.6E-18 T 12-10-2018 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 SUPERFAMILY SSF51984 9 97 3.53E-15 T 12-10-2018 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 Gene3D G3DSA:3.40.1190.10 97 299 3.2E-68 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 SUPERFAMILY SSF53244 299 435 5.95E-44 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.175 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_04280 c2a9df022c0d33d6b553cd9af332dae1 437 Pfam PF08245 Mur ligase middle domain 113 279 6.8E-31 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 K04M3_17690 5ad611fb698e75a7115f4f69b58b2e3c 228 Gene3D G3DSA:3.40.50.2300 3 151 3.2E-26 T 12-10-2018 K04M3_17690 5ad611fb698e75a7115f4f69b58b2e3c 228 SUPERFAMILY SSF52172 6 139 7.4E-31 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_17690 5ad611fb698e75a7115f4f69b58b2e3c 228 Pfam PF12431 Transcriptional regulator 134 162 1.8E-6 T 12-10-2018 IPR028141 Transcriptional regulator K04M3_17690 5ad611fb698e75a7115f4f69b58b2e3c 228 SMART SM00448 5 118 7.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_17690 5ad611fb698e75a7115f4f69b58b2e3c 228 PIRSF PIRSF006171 3 228 9.4E-80 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 K04M3_17690 5ad611fb698e75a7115f4f69b58b2e3c 228 Pfam PF00072 Response regulator receiver domain 7 118 2.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 1.2E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 SUPERFAMILY SSF46894 130 197 2.38E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 SMART SM00448 8 119 7.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 SUPERFAMILY SSF52172 7 125 6.83E-30 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 SMART SM00421 139 196 8.0E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 Gene3D G3DSA:3.40.50.2300 3 131 3.3E-36 T 12-10-2018 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 Gene3D G3DSA:1.10.10.10 132 196 6.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20680 a6a8030934b91e57b8bbc073ef5b2df6 200 Pfam PF00072 Response regulator receiver domain 10 119 8.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_00980 0366b371f25ff3a2007b85518858728e 212 Gene3D G3DSA:3.40.50.150 68 207 8.1E-13 T 12-10-2018 K04M3_00980 0366b371f25ff3a2007b85518858728e 212 SUPERFAMILY SSF53335 47 199 1.55E-19 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_00980 0366b371f25ff3a2007b85518858728e 212 Pfam PF13489 Methyltransferase domain 71 192 5.7E-17 T 12-10-2018 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 Pfam PF00815 Histidinol dehydrogenase 27 424 7.6E-172 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 3.9E-103 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 Gene3D G3DSA:3.40.50.1980 231 346 1.1E-126 T 12-10-2018 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.492 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 SUPERFAMILY SSF53720 4 424 3.92E-93 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 5.9E-167 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 PIRSF PIRSF000099 1 427 8.9E-171 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 K04M3_11110 edc7b9021640764aa528993b63f07e37 430 Gene3D G3DSA:3.40.50.1980 30 229 1.1E-126 T 12-10-2018 K04M3_11680 fa6ec8d2f5197b399dd4cd15cf59ff74 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.6E-18 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 K04M3_33960 7a5892f1a34931a68f4459d7a8096537 487 SUPERFAMILY SSF81296 24 203 1.68E-56 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_33960 7a5892f1a34931a68f4459d7a8096537 487 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 486 56.558 T 12-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 K04M3_33960 7a5892f1a34931a68f4459d7a8096537 487 Gene3D G3DSA:2.70.50.50 24 202 2.1E-81 T 12-10-2018 K04M3_33960 7a5892f1a34931a68f4459d7a8096537 487 Gene3D G3DSA:3.30.70.2150 209 316 5.4E-39 T 12-10-2018 K04M3_33960 7a5892f1a34931a68f4459d7a8096537 487 Gene3D G3DSA:2.60.40.2550 317 414 4.6E-40 T 12-10-2018 K04M3_33960 7a5892f1a34931a68f4459d7a8096537 487 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 24 199 7.2E-36 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal K04M3_36700 716888f4062f6349ab6e4e454430fa14 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.6E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_36700 716888f4062f6349ab6e4e454430fa14 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.6E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_36700 716888f4062f6349ab6e4e454430fa14 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.6E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 K04M3_36700 716888f4062f6349ab6e4e454430fa14 366 Pfam PF12698 ABC-2 family transporter protein 25 357 9.8E-45 T 12-10-2018 K04M3_47330 d6503e464516a5220ce15df4cd023ec8 374 Pfam PF00246 Zinc carboxypeptidase 126 341 4.0E-24 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 K04M3_47330 d6503e464516a5220ce15df4cd023ec8 374 Gene3D G3DSA:2.60.40.3120 1 112 4.6E-42 T 12-10-2018 K04M3_47330 d6503e464516a5220ce15df4cd023ec8 374 SUPERFAMILY SSF53187 106 372 2.27E-64 T 12-10-2018 K04M3_47330 d6503e464516a5220ce15df4cd023ec8 374 Gene3D G3DSA:3.40.630.10 113 374 2.8E-72 T 12-10-2018 K04M3_47330 d6503e464516a5220ce15df4cd023ec8 374 SMART SM00631 112 354 2.7E-4 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 SUPERFAMILY SSF50993 37 448 1.99E-104 T 12-10-2018 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 Gene3D G3DSA:3.40.50.1820 50 683 3.4E-258 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 4.8E-62 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 4.8E-62 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 4.8E-62 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 4.8E-62 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 4.8E-62 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 4.8E-62 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 Gene3D G3DSA:2.130.10.120 108 444 3.4E-258 T 12-10-2018 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 545 575 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 440 2.9E-131 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 Pfam PF00326 Prolyl oligopeptidase family 499 714 7.8E-70 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 K04M3_36530 073b23fefaeb6e9d0db869c739d8c4c5 719 SUPERFAMILY SSF53474 453 697 3.07E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 Gene3D G3DSA:3.40.50.80 103 237 9.9E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 SUPERFAMILY SSF52343 104 235 2.1E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 SUPERFAMILY SSF63380 2 101 2.22E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.0E-22 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 Gene3D G3DSA:2.40.30.10 1 102 2.5E-22 T 12-10-2018 K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_31420 9acaa9b3cc0c2e59def035a6026ff3a3 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_39140 77d019d5bb977bc45941f9d6f0ea7f1f 159 SUPERFAMILY SSF141452 4 157 9.68E-36 T 12-10-2018 IPR036624 Hcp1-like superfamily K04M3_39140 77d019d5bb977bc45941f9d6f0ea7f1f 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 5.0E-28 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp K04M3_39140 77d019d5bb977bc45941f9d6f0ea7f1f 159 Gene3D G3DSA:2.30.110.20 2 158 1.1E-33 T 12-10-2018 IPR036624 Hcp1-like superfamily K04M3_14000 a535ad435216fe8156d6fdd59b3144f3 491 Pfam PF03553 Na+/H+ antiporter family 224 491 3.5E-29 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_13640 a535ad435216fe8156d6fdd59b3144f3 491 Pfam PF03553 Na+/H+ antiporter family 224 491 3.5E-29 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_29210 213368813313cb24deaa06ef088edbb6 313 Pfam PF01112 Asparaginase 7 310 3.3E-109 T 12-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 K04M3_29210 213368813313cb24deaa06ef088edbb6 313 Gene3D G3DSA:3.60.20.30 178 313 1.2E-45 T 12-10-2018 K04M3_29210 213368813313cb24deaa06ef088edbb6 313 SUPERFAMILY SSF56235 5 308 1.98E-96 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 Gene3D G3DSA:3.30.470.20 104 319 2.6E-80 T 12-10-2018 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 PIRSF PIRSF039102 1 329 3.3E-77 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 Gene3D G3DSA:3.30.1490.20 131 198 2.6E-80 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 SUPERFAMILY SSF52440 3 114 2.11E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 2.9E-20 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 32.893 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 6.7E-53 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 SUPERFAMILY SSF56059 115 326 9.82E-43 T 12-10-2018 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 Gene3D G3DSA:3.40.50.20 18 325 2.6E-80 T 12-10-2018 K04M3_41590 1c0f5b36132ab4e6aa24870b10918f4f 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 1.2E-98 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_39980 8c3142104497ee90b18e3aed529a5eef 445 SUPERFAMILY SSF55073 277 434 3.65E-42 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_39980 8c3142104497ee90b18e3aed529a5eef 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 273 427 7.5E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_39980 8c3142104497ee90b18e3aed529a5eef 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 430 2.3E-42 T 12-10-2018 IPR000160 GGDEF domain K04M3_39980 8c3142104497ee90b18e3aed529a5eef 445 Gene3D G3DSA:3.30.70.270 266 438 1.3E-49 T 12-10-2018 K04M3_39980 8c3142104497ee90b18e3aed529a5eef 445 SMART SM00267 261 433 2.1E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_15220 747491abe81cb27710b26e0614849ba8 936 Gene3D G3DSA:3.90.640.10 263 318 1.7E-32 T 12-10-2018 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 Pfam PF00012 Hsp70 protein 90 316 4.3E-16 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 Gene3D G3DSA:3.30.420.40 211 262 1.7E-32 T 12-10-2018 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 Gene3D G3DSA:3.30.420.40 8 210 1.7E-32 T 12-10-2018 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 Pfam PF12531 DNA-K related protein 686 933 7.3E-102 T 12-10-2018 IPR021030 Protein of unknown function DUF3731 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 SUPERFAMILY SSF53067 6 209 9.5E-30 T 12-10-2018 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 SUPERFAMILY SSF53067 223 457 1.84E-19 T 12-10-2018 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 PRINTS PR00301 70kDa heat shock protein signature 399 419 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15220 747491abe81cb27710b26e0614849ba8 936 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.5E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_37980 5554981496d461fa16ef0044ddec929b 304 SUPERFAMILY SSF53474 3 304 6.24E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_37980 5554981496d461fa16ef0044ddec929b 304 Gene3D G3DSA:3.40.50.1820 10 285 4.2E-84 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_37980 5554981496d461fa16ef0044ddec929b 304 Pfam PF12146 Serine aminopeptidase, S33 33 284 1.9E-7 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 K04M3_37980 5554981496d461fa16ef0044ddec929b 304 Gene3D G3DSA:1.10.10.800 142 230 4.2E-84 T 12-10-2018 K04M3_21890 6708ef9b1312ac493a591f1445a963e3 307 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 4.5E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 K04M3_21890 6708ef9b1312ac493a591f1445a963e3 307 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 4.5E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 K04M3_21890 6708ef9b1312ac493a591f1445a963e3 307 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 4.5E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 K04M3_21890 6708ef9b1312ac493a591f1445a963e3 307 Gene3D G3DSA:3.40.800.20 2 302 1.6E-67 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 K04M3_21890 6708ef9b1312ac493a591f1445a963e3 307 SUPERFAMILY SSF52768 3 287 8.15E-81 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily K04M3_21890 6708ef9b1312ac493a591f1445a963e3 307 Pfam PF00850 Histone deacetylase domain 41 286 2.4E-51 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 SUPERFAMILY SSF52540 74 361 3.98E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Pfam PF00270 DEAD/DEAH box helicase 30 196 2.2E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 SMART SM00490 259 340 1.3E-34 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Gene3D G3DSA:3.40.50.300 1 211 2.4E-74 T 12-10-2018 K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Pfam PF03880 DbpA RNA binding domain 475 542 5.8E-16 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.76 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Gene3D G3DSA:3.40.50.300 215 434 5.1E-53 T 12-10-2018 K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 SMART SM00487 25 223 2.7E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 Gene3D G3DSA:3.30.70.330 476 545 1.4E-9 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily K04M3_37950 09879353247facadbe5a7c47ca0ff402 640 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_05230 96cd9bfb9907cb1a88f5502fe1c02136 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.7E-30 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 K04M3_05230 96cd9bfb9907cb1a88f5502fe1c02136 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.3E-23 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 K04M3_05230 96cd9bfb9907cb1a88f5502fe1c02136 108 Gene3D G3DSA:3.30.160.100 1 105 5.0E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like K04M3_05230 96cd9bfb9907cb1a88f5502fe1c02136 108 SUPERFAMILY SSF69754 1 102 6.28E-29 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 9.0E-58 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 157 34.243 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 1.5E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 1.5E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 1.5E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 1.5E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 1.5E-47 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 Pfam PF01467 Cytidylyltransferase-like 4 132 1.4E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 SUPERFAMILY SSF52374 1 152 2.52E-42 T 12-10-2018 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 5.4E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 Gene3D G3DSA:3.40.50.620 1 160 2.5E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_01730 7a3a31c1f758910b0173b9ff2b424d28 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 10 93 3.0E-4 T 12-10-2018 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Gene3D G3DSA:1.10.10.60 426 473 7.7E-14 T 12-10-2018 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 SMART SM00382 175 321 2.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Pfam PF00158 Sigma-54 interaction domain 155 321 6.3E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Gene3D G3DSA:3.40.50.2300 17 134 3.7E-30 T 12-10-2018 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 SMART SM00448 16 127 8.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 SUPERFAMILY SSF46689 426 475 2.28E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Gene3D G3DSA:3.40.50.300 140 324 1.7E-64 T 12-10-2018 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 SUPERFAMILY SSF52540 154 384 5.7E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 SUPERFAMILY SSF52172 16 199 2.28E-38 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Gene3D G3DSA:1.10.8.60 325 389 2.7E-17 T 12-10-2018 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 Pfam PF00072 Response regulator receiver domain 18 127 6.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_15800 fc90dbe9603f9211896f539f1ceec1b8 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_39720 f466b36ca52520bec42d29f565fa85d2 81 SUPERFAMILY SSF54060 24 74 8.24E-9 T 12-10-2018 K04M3_39720 f466b36ca52520bec42d29f565fa85d2 81 Gene3D G3DSA:3.90.75.20 2 81 1.4E-7 T 12-10-2018 K04M3_39720 f466b36ca52520bec42d29f565fa85d2 81 Pfam PF13392 HNH endonuclease 39 72 1.2E-10 T 12-10-2018 IPR003615 HNH nuclease K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 Gene3D G3DSA:3.40.1160.10 7 296 1.3E-83 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 2.2E-202 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 Pfam PF00583 Acetyltransferase (GNAT) family 333 416 4.2E-8 T 12-10-2018 IPR000182 GNAT domain K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.939 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 Pfam PF00696 Amino acid kinase family 25 270 1.2E-27 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 PIRSF PIRSF000423 1 445 6.2E-204 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 SUPERFAMILY SSF53633 4 294 1.4E-66 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 Gene3D G3DSA:3.40.630.30 297 445 1.4E-36 T 12-10-2018 K04M3_24900 b63245d0de3dfec270bf84f677af01de 445 SUPERFAMILY SSF55729 300 425 6.73E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_24440 bfa6017f098546f97263377ba7fb63b4 592 Gene3D G3DSA:3.40.50.720 329 590 7.5E-27 T 12-10-2018 K04M3_24440 bfa6017f098546f97263377ba7fb63b4 592 Pfam PF14461 Prokaryotic E2 family B 24 150 1.2E-13 T 12-10-2018 IPR032701 Prokaryotic E2 family B K04M3_24440 bfa6017f098546f97263377ba7fb63b4 592 Pfam PF00899 ThiF family 348 566 3.1E-19 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 K04M3_24440 bfa6017f098546f97263377ba7fb63b4 592 SUPERFAMILY SSF69572 349 591 3.01E-24 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 K04M3_15140 adca2ee4145e975b5c600591f907f624 579 Pfam PF00005 ABC transporter 352 500 1.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_15140 adca2ee4145e975b5c600591f907f624 579 SMART SM00382 361 547 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15140 adca2ee4145e975b5c600591f907f624 579 SUPERFAMILY SSF52540 335 571 3.35E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15140 adca2ee4145e975b5c600591f907f624 579 Gene3D G3DSA:3.40.50.300 335 579 1.2E-74 T 12-10-2018 K04M3_15140 adca2ee4145e975b5c600591f907f624 579 Gene3D G3DSA:1.20.1560.10 3 319 3.0E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_15140 adca2ee4145e975b5c600591f907f624 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_15140 adca2ee4145e975b5c600591f907f624 579 Pfam PF00664 ABC transporter transmembrane region 21 291 9.2E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_15140 adca2ee4145e975b5c600591f907f624 579 SUPERFAMILY SSF90123 7 320 3.27E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 Gene3D G3DSA:1.10.1740.190 303 450 7.7E-33 T 12-10-2018 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 605 675 9.1E-9 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 Pfam PF01752 Collagenase 274 558 1.9E-112 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 Pfam PF08453 Peptidase family M9 N-terminal 31 212 8.3E-55 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 Gene3D G3DSA:2.60.120.380 588 690 1.2E-12 T 12-10-2018 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 Gene3D G3DSA:2.60.120.380 692 807 1.6E-8 T 12-10-2018 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 6.3E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 6.3E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 6.3E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 6.3E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_36420 7e887a91eb24aae42ee29aefe47f94f6 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 6.3E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 9.2E-78 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 Gene3D G3DSA:3.40.710.10 251 632 2.2E-95 T 12-10-2018 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 SUPERFAMILY SSF56519 58 254 1.83E-55 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 SUPERFAMILY SSF56601 256 619 3.09E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.5E-241 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 Gene3D G3DSA:3.30.1390.30 87 162 3.0E-53 T 12-10-2018 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.648 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 Gene3D G3DSA:3.90.1310.10 66 250 3.0E-53 T 12-10-2018 K04M3_06980 0634c9ed4f71cdf6755d4b823a5d6b87 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 3.3E-51 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 K04M3_22510 a61283191c881f5a3a5c7ddc49e2eda9 438 SUPERFAMILY SSF56935 26 438 5.49E-103 T 12-10-2018 K04M3_22510 a61283191c881f5a3a5c7ddc49e2eda9 438 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 438 2.2E-133 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) K04M3_22510 a61283191c881f5a3a5c7ddc49e2eda9 438 Gene3D G3DSA:2.40.160.60 26 438 3.1E-125 T 12-10-2018 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 7.3E-32 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:1.20.58.310 9 109 1.9E-36 T 12-10-2018 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.512 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.9E-264 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.0E-144 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF140356 4 104 9.29E-33 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF56024 500 684 4.49E-69 T 12-10-2018 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 PIRSF PIRSF015589 1 694 1.0E-253 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF143724 107 313 1.96E-65 T 12-10-2018 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:3.30.870.10 500 686 1.1E-72 T 12-10-2018 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 4.7E-48 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:3.30.870.10 319 499 9.0E-73 T 12-10-2018 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 Gene3D G3DSA:3.30.1840.10 110 307 1.2E-76 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 K04M3_05480 daf2e2c5daacbb312bb3d17199d498dd 696 SUPERFAMILY SSF56024 315 496 6.59E-54 T 12-10-2018 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 12-10-2018 IPR004087 K Homology domain GO:0003676 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 17 107 1.1E-28 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02690 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 7.9E-112 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 7.2E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Gene3D G3DSA:2.40.110.10 177 300 3.6E-90 T 12-10-2018 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 SUPERFAMILY SSF56645 61 296 3.01E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Gene3D G3DSA:1.10.540.10 63 176 3.6E-90 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 SUPERFAMILY SSF47203 301 453 1.26E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.8E-8 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Gene3D G3DSA:1.20.140.10 301 446 3.6E-90 T 12-10-2018 K04M3_11870 fd237bf6dc24756557a1c835c738a822 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.9E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 3.3E-39 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 PIRSF PIRSF000178 2 130 5.8E-32 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 Gene3D G3DSA:1.20.1300.10 5 130 3.1E-43 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 SUPERFAMILY SSF81343 8 130 4.41E-34 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.7E-28 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08380 52359ca2f4693488136becf50e272b4b 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_46910 aa4e00339c206ce200aa55897c49c127 294 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 21 268 7.5E-88 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 K04M3_46910 aa4e00339c206ce200aa55897c49c127 294 Gene3D G3DSA:1.10.30.40 9 65 9.5E-11 T 12-10-2018 K04M3_46910 aa4e00339c206ce200aa55897c49c127 294 PIRSF PIRSF018982 6 278 4.0E-86 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 K04M3_46910 aa4e00339c206ce200aa55897c49c127 294 Gene3D G3DSA:3.40.50.11240 84 267 2.3E-63 T 12-10-2018 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 SUPERFAMILY SSF53335 5 268 4.98E-76 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 Gene3D G3DSA:1.10.1020.10 57 156 2.5E-83 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 8.1E-95 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 4.6E-68 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 Gene3D G3DSA:3.40.50.150 7 239 2.5E-83 T 12-10-2018 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 PIRSF PIRSF000398 1 274 7.9E-73 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 K04M3_28810 dd580d4ad5204ac381f6215da923f9a2 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_47030 ae794bb98d774d245646297ca661c8d8 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 1.2E-19 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 K04M3_47030 ae794bb98d774d245646297ca661c8d8 132 SUPERFAMILY SSF51316 2 131 6.8E-43 T 12-10-2018 IPR011057 Mss4-like superfamily K04M3_47030 ae794bb98d774d245646297ca661c8d8 132 Gene3D G3DSA:3.90.1590.10 1 119 1.6E-19 T 12-10-2018 K04M3_21150 01a81fb1773d48018b4752bf30dfb5f7 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 28.756 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_21150 01a81fb1773d48018b4752bf30dfb5f7 193 PIRSF PIRSF006305 1 192 3.5E-42 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_21150 01a81fb1773d48018b4752bf30dfb5f7 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 1.3E-50 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_21150 01a81fb1773d48018b4752bf30dfb5f7 193 Gene3D G3DSA:3.90.950.10 5 193 7.1E-57 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_21150 01a81fb1773d48018b4752bf30dfb5f7 193 SUPERFAMILY SSF52972 1 185 5.49E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_21150 01a81fb1773d48018b4752bf30dfb5f7 193 Pfam PF02545 Maf-like protein 5 186 4.6E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.9E-63 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 SUPERFAMILY SSF51735 6 170 1.97E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 SUPERFAMILY SSF56327 173 436 2.89E-94 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 2.7E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 Gene3D G3DSA:3.90.110.10 171 439 7.4E-100 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 7.3E-49 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_27650 72e0ce3b67a8b71afec590a58b6fcdd1 440 Gene3D G3DSA:3.40.50.720 1 170 2.7E-67 T 12-10-2018 K04M3_27670 24903f4f3770e6c429eda5c1eb810d2b 444 Pfam PF02378 Phosphotransferase system, EIIC 32 351 7.2E-64 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_27670 24903f4f3770e6c429eda5c1eb810d2b 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 424 2.9E-112 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 K04M3_27670 24903f4f3770e6c429eda5c1eb810d2b 444 PIRSF PIRSF006351 4 432 5.9E-145 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 Gene3D G3DSA:3.30.2420.10 31 111 1.3E-19 T 12-10-2018 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 PRINTS PR01374 Gram-negative bacterial tonB protein signature 53 71 1.4E-7 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 PRINTS PR01374 Gram-negative bacterial tonB protein signature 32 53 1.4E-7 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 PRINTS PR01374 Gram-negative bacterial tonB protein signature 72 89 1.4E-7 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 SUPERFAMILY SSF74653 32 95 9.29E-19 T 12-10-2018 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 37 97 9.9E-16 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 K04M3_19200 b29a014d3656dd0e24387d03ab098cfb 111 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 38 105 1.4E-12 T 12-10-2018 IPR006260 TonB/TolA, C-terminal K04M3_29220 94815afcc1b8d67b4c7ce864608d330f 183 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.7E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain K04M3_29220 94815afcc1b8d67b4c7ce864608d330f 183 SUPERFAMILY SSF54534 2 140 3.34E-34 T 12-10-2018 K04M3_29220 94815afcc1b8d67b4c7ce864608d330f 183 Gene3D G3DSA:3.10.50.40 3 154 3.3E-58 T 12-10-2018 K04M3_29220 94815afcc1b8d67b4c7ce864608d330f 183 Gene3D G3DSA:2.40.10.330 71 121 3.3E-58 T 12-10-2018 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 18 328 2.8E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 146 158 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 19 32 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 91 111 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 278 287 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 169 190 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 112 131 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 SUPERFAMILY SSF53067 116 324 6.26E-43 T 12-10-2018 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 Pfam PF00814 Glycoprotease family 39 322 3.0E-102 T 12-10-2018 IPR000905 Gcp-like domain K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 Gene3D G3DSA:3.30.420.40 144 308 3.1E-130 T 12-10-2018 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 20 321 3.1E-122 T 12-10-2018 IPR017861 Kae1/TsaD family K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 16 346 63.387 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 SUPERFAMILY SSF53067 18 138 6.91E-31 T 12-10-2018 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 Gene3D G3DSA:3.30.420.40 18 330 3.1E-130 T 12-10-2018 K04M3_03790 1757a463749e0fd4c746ad16a5aa66a5 353 ProSitePatterns PS01016 Glycoprotease family signature. 111 131 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 K04M3_30160 d213ec45e12d11bd45254b2b0cbcab47 395 Gene3D G3DSA:1.20.1250.20 2 185 1.9E-17 T 12-10-2018 K04M3_30160 d213ec45e12d11bd45254b2b0cbcab47 395 Pfam PF12832 MFS_1 like family 13 361 2.6E-38 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain K04M3_30160 d213ec45e12d11bd45254b2b0cbcab47 395 Gene3D G3DSA:1.20.1250.20 195 385 4.3E-32 T 12-10-2018 K04M3_30160 d213ec45e12d11bd45254b2b0cbcab47 395 SUPERFAMILY SSF103473 8 373 3.79E-34 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_30160 d213ec45e12d11bd45254b2b0cbcab47 395 PIRSF PIRSF004925 1 388 2.3E-102 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter K04M3_26090 96eb204b068884be00f11706ae9b6434 287 SUPERFAMILY SSF52374 4 280 2.95E-86 T 12-10-2018 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 Gene3D G3DSA:3.40.50.620 79 214 5.1E-108 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_26090 96eb204b068884be00f11706ae9b6434 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.6E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.6E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.6E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.6E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.6E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 126 252 2.6E-16 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 5.7E-29 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 Gene3D G3DSA:3.40.50.620 4 280 5.1E-108 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_26090 96eb204b068884be00f11706ae9b6434 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.269 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 K04M3_26090 96eb204b068884be00f11706ae9b6434 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 1.7E-112 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 K04M3_14770 e0383c04380d205fdaf76c13167c02c7 505 SUPERFAMILY SSF53649 22 452 3.49E-118 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_14770 e0383c04380d205fdaf76c13167c02c7 505 Pfam PF00884 Sulfatase 26 351 1.1E-61 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_14770 e0383c04380d205fdaf76c13167c02c7 505 Gene3D G3DSA:3.30.1120.10 393 428 8.6E-99 T 12-10-2018 K04M3_14770 e0383c04380d205fdaf76c13167c02c7 505 Gene3D G3DSA:3.40.720.10 26 392 8.6E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 Gene3D G3DSA:3.40.1260.20 403 488 2.9E-6 T 12-10-2018 K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 7.0E-173 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-104 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 SMART SM00316 37 122 5.8E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_28180 7ffaea07364b98b796b7e8afa0b2ebe2 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.50.100 714 788 3.4E-32 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.270.10 1035 1241 5.3E-88 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 4.3E-157 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.9E-7 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 8.1E-17 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1110.10 157 270 1.1E-27 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1100.10 416 626 9.9E-72 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 12-10-2018 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-22 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.285 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_30530 309d506875f14c58c86a7f6d95332602 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Gene3D G3DSA:2.40.50.100 197 231 4.3E-9 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 SUPERFAMILY SSF111369 101 158 2.35E-6 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Gene3D G3DSA:2.40.30.170 232 308 4.3E-9 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Gene3D G3DSA:1.10.287.470 169 196 4.3E-9 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Pfam PF13437 HlyD family secretion protein 196 276 1.3E-7 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Gene3D G3DSA:1.10.287.470 68 88 3.7E-6 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Gene3D G3DSA:2.40.50.100 33 67 3.7E-6 T 12-10-2018 K04M3_36720 3700233dd91629cb7998b0b31f927342 316 Gene3D G3DSA:1.10.287.470 100 162 5.4E-11 T 12-10-2018 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.7E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 1.7E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 1.7E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 1.7E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 1.7E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 1.3E-147 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 SUPERFAMILY SSF51445 1 455 2.09E-157 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 Gene3D G3DSA:3.20.20.80 1 460 4.0E-151 T 12-10-2018 K04M3_48020 a7183bd593e7d6e469c327ceb9118c32 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site K04M3_01800 9480d52c110d50c5d43b2b0648955944 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 2.2E-160 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 K04M3_01800 9480d52c110d50c5d43b2b0648955944 354 SUPERFAMILY SSF51735 1 337 1.07E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_01800 9480d52c110d50c5d43b2b0648955944 354 Gene3D G3DSA:3.40.50.720 2 325 2.5E-139 T 12-10-2018 K04M3_01800 9480d52c110d50c5d43b2b0648955944 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 6.8E-101 T 12-10-2018 IPR016040 NAD(P)-binding domain K04M3_01800 9480d52c110d50c5d43b2b0648955944 354 Gene3D G3DSA:3.90.25.10 201 333 2.5E-139 T 12-10-2018 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PRINTS PR00471 Acetate kinase family signature 173 186 7.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PRINTS PR00471 Acetate kinase family signature 378 390 7.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PRINTS PR00471 Acetate kinase family signature 299 312 7.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PRINTS PR00471 Acetate kinase family signature 203 224 7.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PRINTS PR00471 Acetate kinase family signature 6 17 7.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PRINTS PR00471 Acetate kinase family signature 321 337 7.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 Gene3D G3DSA:3.30.420.40 196 397 3.3E-72 T 12-10-2018 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 SUPERFAMILY SSF53067 158 396 4.88E-83 T 12-10-2018 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 SUPERFAMILY SSF53067 5 196 2.07E-63 T 12-10-2018 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 Pfam PF00871 Acetokinase family 6 391 8.5E-143 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 8.4E-147 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 170.552 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 PIRSF PIRSF000722 2 397 2.1E-134 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 Gene3D G3DSA:3.30.420.40 3 195 4.9E-66 T 12-10-2018 K04M3_37960 03e9e29ea916a57212a030642e9d452e 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 SUPERFAMILY SSF47384 335 376 1.96E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Gene3D G3DSA:3.40.50.2300 2 141 3.3E-8 T 12-10-2018 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 SUPERFAMILY SSF51206 201 311 2.36E-19 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Gene3D G3DSA:3.30.565.10 487 638 4.0E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 SMART SM00387 528 641 1.1E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Gene3D G3DSA:2.60.120.10 145 318 3.8E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 SUPERFAMILY SSF55874 481 639 6.29E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 1.0E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 SUPERFAMILY SSF52172 3 140 1.87E-7 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Gene3D G3DSA:1.10.287.130 319 414 6.1E-17 T 12-10-2018 K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 3.7E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_12020 6aa3e6075e170a5be91c4db929cd57e6 646 Gene3D G3DSA:1.10.287.130 433 486 4.0E-40 T 12-10-2018 K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 3.0E-256 T 12-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 SUPERFAMILY SSF161098 31 284 3.6E-42 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 558 1.3E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 287 1.1E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 SUPERFAMILY SSF161098 308 558 9.03E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 Gene3D G3DSA:1.10.3720.10 28 291 3.1E-48 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_47400 777e81a433b496ffa6bc2fec207c184c 574 Gene3D G3DSA:1.10.3720.10 310 564 1.9E-29 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_18740 eb9009380734b187d593247d15d2a2f6 84 SMART SM00530 12 67 2.1E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_18740 eb9009380734b187d593247d15d2a2f6 84 Pfam PF01381 Helix-turn-helix 13 64 1.0E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_18740 eb9009380734b187d593247d15d2a2f6 84 Gene3D G3DSA:1.10.260.40 1 84 1.0E-11 T 12-10-2018 K04M3_18740 eb9009380734b187d593247d15d2a2f6 84 SUPERFAMILY SSF47413 5 69 1.69E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_15620 07b7407f2bb2d8a50fe1b4fb65ae101d 344 Pfam PF00072 Response regulator receiver domain 23 129 1.6E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_15620 07b7407f2bb2d8a50fe1b4fb65ae101d 344 SUPERFAMILY SSF52172 19 136 1.71E-28 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_15620 07b7407f2bb2d8a50fe1b4fb65ae101d 344 Gene3D G3DSA:3.40.1550.10 161 342 6.8E-22 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_15620 07b7407f2bb2d8a50fe1b4fb65ae101d 344 Gene3D G3DSA:3.40.50.2300 15 139 6.0E-29 T 12-10-2018 K04M3_15620 07b7407f2bb2d8a50fe1b4fb65ae101d 344 SUPERFAMILY SSF103039 164 342 3.4E-29 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_15620 07b7407f2bb2d8a50fe1b4fb65ae101d 344 SMART SM00448 21 133 1.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_21450 91de64966e1458331510030cc72c9c1d 300 Gene3D G3DSA:1.10.3720.10 96 296 4.0E-20 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_21450 91de64966e1458331510030cc72c9c1d 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 1.0E-14 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain K04M3_21450 91de64966e1458331510030cc72c9c1d 300 SUPERFAMILY SSF161098 97 281 1.03E-26 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_21450 91de64966e1458331510030cc72c9c1d 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.7E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_20860 94574b3c91580288522230b16acec043 226 Gene3D G3DSA:3.40.50.300 1 226 2.6E-82 T 12-10-2018 K04M3_20860 94574b3c91580288522230b16acec043 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 7.1E-85 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 K04M3_20860 94574b3c91580288522230b16acec043 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.452 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 K04M3_20860 94574b3c91580288522230b16acec043 226 Pfam PF02224 Cytidylate kinase 8 221 6.6E-78 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 K04M3_20860 94574b3c91580288522230b16acec043 226 SUPERFAMILY SSF52540 6 223 1.66E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 SMART SM00866 91 228 2.9E-28 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 SUPERFAMILY SSF64288 56 230 9.26E-37 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 Gene3D G3DSA:3.40.1410.10 89 224 2.2E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 SMART SM00345 9 68 1.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 4.4E-91 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 Gene3D G3DSA:1.10.10.10 1 69 1.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 Pfam PF07702 UTRA domain 92 228 9.0E-34 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 SUPERFAMILY SSF46785 3 72 5.01E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.7E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_12330 4d1f3a5829970e321b9816a8c99bc1d7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.7E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_46930 959e3a498b0e69104cc0eb0d338c40e1 316 SMART SM00342 225 310 5.8E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_46930 959e3a498b0e69104cc0eb0d338c40e1 316 SUPERFAMILY SSF46689 261 311 2.01E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_46930 959e3a498b0e69104cc0eb0d338c40e1 316 Pfam PF12833 Helix-turn-helix domain 231 311 8.0E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_46930 959e3a498b0e69104cc0eb0d338c40e1 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 306 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_46930 959e3a498b0e69104cc0eb0d338c40e1 316 Gene3D G3DSA:1.10.10.60 208 313 2.6E-29 T 12-10-2018 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 Gene3D G3DSA:3.30.70.1150 80 157 5.6E-28 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 Pfam PF13710 ACT domain 11 73 1.8E-17 T 12-10-2018 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 4.0E-37 T 12-10-2018 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 3.1E-64 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 SUPERFAMILY SSF55021 1 75 6.87E-23 T 12-10-2018 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 SUPERFAMILY SSF55021 79 162 6.27E-27 T 12-10-2018 K04M3_03560 217b767c942babec9fd2df1f6f4491e9 164 Gene3D G3DSA:3.30.70.260 1 79 4.7E-34 T 12-10-2018 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.9E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 Gene3D G3DSA:3.40.47.10 138 385 6.0E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 SUPERFAMILY SSF53901 266 390 4.12E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 PIRSF PIRSF000429 2 391 2.2E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 7.4E-241 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 5.5E-142 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 SUPERFAMILY SSF53901 4 263 7.44E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 Gene3D G3DSA:3.40.47.10 8 271 6.0E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 2.1E-83 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.405 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 K04M3_00180 ec4e1d6117847088caf8ca788febd976 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 SUPERFAMILY SSF53850 113 281 9.95E-26 T 12-10-2018 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 Gene3D G3DSA:3.40.190.10 94 280 8.5E-36 T 12-10-2018 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 SUPERFAMILY SSF46785 1 85 6.88E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 Gene3D G3DSA:1.10.10.10 1 93 1.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-24 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 Pfam PF03466 LysR substrate binding domain 116 283 8.6E-30 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_43960 3cc47b95d9033bae20122e6920cc879d 295 Gene3D G3DSA:3.40.190.10 163 267 8.5E-36 T 12-10-2018 K04M3_17650 bf10a3a987d6fd2237c671da2a2631a9 238 SUPERFAMILY SSF100950 3 237 5.34E-61 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_17650 bf10a3a987d6fd2237c671da2a2631a9 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 1.3E-53 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 K04M3_17650 bf10a3a987d6fd2237c671da2a2631a9 238 Gene3D G3DSA:3.40.50.1360 1 238 6.8E-89 T 12-10-2018 K04M3_17650 bf10a3a987d6fd2237c671da2a2631a9 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 1.9E-61 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.979 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.6E-23 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.9E-20 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Gene3D G3DSA:3.10.50.40 274 415 5.2E-39 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 SUPERFAMILY SSF54534 278 380 1.83E-29 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Gene3D G3DSA:3.10.50.40 171 270 2.6E-68 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Pfam PF09312 SurA N-terminal domain 24 141 3.1E-43 T 12-10-2018 IPR015391 SurA N-terminal K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 Gene3D G3DSA:1.10.4030.30 25 271 2.6E-68 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 SUPERFAMILY SSF54534 172 270 6.21E-24 T 12-10-2018 K04M3_03420 dbb49573351c200a61c2583659e7f6fe 427 SUPERFAMILY SSF109998 24 196 4.32E-37 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily K04M3_29370 da311e75287aa74e4d73ba67c620ef36 984 Pfam PF00932 Lamin Tail Domain 20 129 3.2E-15 T 12-10-2018 IPR001322 Lamin tail domain K04M3_29370 da311e75287aa74e4d73ba67c620ef36 984 SUPERFAMILY SSF74853 26 121 6.28E-6 T 12-10-2018 IPR036415 Lamin tail domain superfamily K04M3_29370 da311e75287aa74e4d73ba67c620ef36 984 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 1.8E-8 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_29370 da311e75287aa74e4d73ba67c620ef36 984 SUPERFAMILY SSF56219 473 844 4.75E-34 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_29370 da311e75287aa74e4d73ba67c620ef36 984 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 963 983 0.0026 T 12-10-2018 IPR020008 GlyGly-CTERM domain K04M3_05860 40fd32712e9e69bd927674b15297905d 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 7.4E-178 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.197 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.4E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.0E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 3.0E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like K04M3_05860 40fd32712e9e69bd927674b15297905d 498 SUPERFAMILY SSF52540 4 163 2.75E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Gene3D G3DSA:3.40.50.300 204 382 4.6E-50 T 12-10-2018 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Gene3D G3DSA:3.40.50.300 2 160 1.1E-42 T 12-10-2018 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 5.1E-26 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 9.2E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_05860 40fd32712e9e69bd927674b15297905d 498 Gene3D G3DSA:3.30.300.20 385 467 6.4E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_05860 40fd32712e9e69bd927674b15297905d 498 SUPERFAMILY SSF52540 139 471 1.83E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05860 40fd32712e9e69bd927674b15297905d 498 SMART SM00382 1 139 3.4 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05860 40fd32712e9e69bd927674b15297905d 498 SMART SM00382 208 355 0.22 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05860 40fd32712e9e69bd927674b15297905d 498 PIRSF PIRSF006485 1 473 9.2E-179 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 K04M3_37630 3935bedc9872430bedbc813d651fb549 657 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 649 4.6E-237 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 K04M3_37630 3935bedc9872430bedbc813d651fb549 657 Gene3D G3DSA:3.30.300.30 532 657 3.0E-14 T 12-10-2018 K04M3_37630 3935bedc9872430bedbc813d651fb549 657 Pfam PF00501 AMP-binding enzyme 106 532 2.5E-47 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_37630 3935bedc9872430bedbc813d651fb549 657 Gene3D G3DSA:3.40.50.12780 68 528 3.3E-58 T 12-10-2018 K04M3_37630 3935bedc9872430bedbc813d651fb549 657 SUPERFAMILY SSF56801 33 650 4.97E-124 T 12-10-2018 K04M3_37630 3935bedc9872430bedbc813d651fb549 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_33220 d123f55193796bbff046a4d1cd183032 712 Gene3D G3DSA:2.40.170.20 192 712 1.5E-115 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_33220 d123f55193796bbff046a4d1cd183032 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 56 - T 12-10-2018 IPR010916 TonB box, conserved site K04M3_33220 d123f55193796bbff046a4d1cd183032 712 SUPERFAMILY SSF56935 39 712 6.02E-126 T 12-10-2018 K04M3_33220 d123f55193796bbff046a4d1cd183032 712 Pfam PF00593 TonB dependent receptor 265 711 6.5E-48 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_33220 d123f55193796bbff046a4d1cd183032 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 712 4.5E-164 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_33220 d123f55193796bbff046a4d1cd183032 712 Gene3D G3DSA:2.170.130.10 64 185 1.1E-29 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_33220 d123f55193796bbff046a4d1cd183032 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 2.6E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_42860 27075df8259a2242c3599c4157620051 326 Gene3D G3DSA:2.30.30.40 36 154 6.9E-30 T 12-10-2018 K04M3_42860 27075df8259a2242c3599c4157620051 326 SUPERFAMILY SSF50341 7 165 1.12E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_42860 27075df8259a2242c3599c4157620051 326 PIRSF PIRSF002867 1 324 6.9E-103 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV K04M3_42860 27075df8259a2242c3599c4157620051 326 Gene3D G3DSA:3.40.50.2300 191 323 9.1E-29 T 12-10-2018 K04M3_42860 27075df8259a2242c3599c4157620051 326 SMART SM00448 193 318 6.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42860 27075df8259a2242c3599c4157620051 326 SMART SM00260 14 160 2.7E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_42860 27075df8259a2242c3599c4157620051 326 SUPERFAMILY SSF52172 193 320 1.99E-28 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_42860 27075df8259a2242c3599c4157620051 326 Gene3D G3DSA:2.40.50.180 44 160 6.9E-30 T 12-10-2018 K04M3_42860 27075df8259a2242c3599c4157620051 326 Pfam PF01584 CheW-like domain 37 162 1.1E-29 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_42860 27075df8259a2242c3599c4157620051 326 Pfam PF00072 Response regulator receiver domain 195 316 1.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_47900 b9dd0929d8f4f41761a8d92d7ff9b101 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 321 5.3E-94 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_47900 b9dd0929d8f4f41761a8d92d7ff9b101 332 PIRSF PIRSF000267 1 332 1.2E-90 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_47900 b9dd0929d8f4f41761a8d92d7ff9b101 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 6.6E-48 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 SUPERFAMILY SSF51604 106 321 3.67E-46 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 SUPERFAMILY SSF54826 1 100 1.77E-25 T 12-10-2018 K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.895 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 Gene3D G3DSA:3.30.390.10 4 306 2.3E-115 T 12-10-2018 IPR029017 Enolase-like, N-terminal K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 SMART SM00922 116 213 4.9E-6 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 Pfam PF13378 Enolase C-terminal domain-like 125 277 2.1E-11 T 12-10-2018 IPR029065 Enolase C-terminal domain-like K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 1.1E-107 T 12-10-2018 K04M3_09270 058ecb0d78cf4a7447c036b82b60af59 329 Gene3D G3DSA:3.20.20.120 99 300 2.3E-115 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 Gene3D G3DSA:3.40.930.10 1 142 3.5E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 SUPERFAMILY SSF55804 149 276 2.62E-18 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 Pfam PF00381 PTS HPr component phosphorylation site 291 370 4.3E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 Gene3D G3DSA:3.40.930.10 143 275 8.3E-6 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 291 370 1.5E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 SUPERFAMILY SSF55594 291 376 8.24E-24 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 1.1E-33 T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 Gene3D G3DSA:3.30.1340.10 288 377 4.5E-27 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 5.6E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 5.6E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 5.6E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 SUPERFAMILY SSF55804 4 140 1.7E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_42250 7edd32c0df4d51b609311579a2b724b6 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 Gene3D G3DSA:1.20.120.220 92 267 3.5E-66 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.186 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 Pfam PF00119 ATP synthase A chain 44 262 8.3E-58 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32290 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_07550 462f9a6dda788eed69f60f34073e409c 198 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 192 2.7E-31 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 K04M3_07550 462f9a6dda788eed69f60f34073e409c 198 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 195 24.523 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 PIRSF PIRSF000437 19 808 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.356 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 PIRSF PIRSF500064 2 808 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 SUPERFAMILY SSF69593 236 489 1.19E-25 T 12-10-2018 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 SMART SM00563 300 427 7.8E-27 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_30940 a91504735ac494a7a97bb29640a5e2d6 808 Pfam PF01553 Acyltransferase 289 424 1.7E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_06810 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 Gene3D G3DSA:3.40.190.10 34 263 6.9E-94 T 12-10-2018 K04M3_06810 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 PIRSF PIRSF002854 1 269 7.5E-99 T 12-10-2018 IPR004872 Lipoprotein NlpA family K04M3_06810 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 5.8E-126 T 12-10-2018 IPR004872 Lipoprotein NlpA family K04M3_06810 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 Gene3D G3DSA:3.40.190.10 115 219 6.9E-94 T 12-10-2018 K04M3_06810 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 Pfam PF03180 NLPA lipoprotein 33 269 3.9E-98 T 12-10-2018 IPR004872 Lipoprotein NlpA family K04M3_06810 0e4dec201b85bb43bd5f7bc88a7ca4c9 269 SUPERFAMILY SSF53850 32 269 1.6E-78 T 12-10-2018 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 12-10-2018 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 3.5E-123 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 Gene3D G3DSA:3.40.220.10 1 159 3.1E-59 T 12-10-2018 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.779 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 Gene3D G3DSA:3.40.630.10 181 497 1.3E-140 T 12-10-2018 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 SUPERFAMILY SSF53187 179 496 3.77E-124 T 12-10-2018 K04M3_27760 84e2bf41affad93db62c5133778bb1ec 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 9.7E-34 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 K04M3_00920 405e31478401679fe62032b5816931b2 353 SMART SM01004 9 333 4.0E-246 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 Gene3D G3DSA:3.20.20.70 2 337 4.0E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_00920 405e31478401679fe62032b5816931b2 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.9E-142 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PIRSF PIRSF001415 2 336 7.7E-153 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 K04M3_00920 405e31478401679fe62032b5816931b2 353 SUPERFAMILY SSF51569 7 335 1.08E-145 T 12-10-2018 K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 SUPERFAMILY SSF141868 525 773 2.88E-84 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 506 1.0E-40 T 12-10-2018 IPR000160 GGDEF domain K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 Pfam PF00563 EAL domain 526 760 1.0E-68 T 12-10-2018 IPR001633 EAL domain K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 SUPERFAMILY SSF55073 354 512 5.34E-51 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 505 1.5E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 SMART SM00267 338 510 2.9E-58 T 12-10-2018 IPR000160 GGDEF domain K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 Gene3D G3DSA:3.20.20.450 523 774 1.1E-93 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 SMART SM00052 520 765 5.9E-105 T 12-10-2018 IPR001633 EAL domain K04M3_34820 10f72330ae782fd544697b108a4a0e8f 776 Gene3D G3DSA:3.30.70.270 343 522 4.6E-57 T 12-10-2018 K04M3_33660 12c88f4b851ab7abf6e84a1bdd794f3e 289 SUPERFAMILY SSF53613 2 274 4.21E-69 T 12-10-2018 IPR029056 Ribokinase-like K04M3_33660 12c88f4b851ab7abf6e84a1bdd794f3e 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 4.1E-21 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 K04M3_33660 12c88f4b851ab7abf6e84a1bdd794f3e 289 Gene3D G3DSA:3.40.1190.20 1 288 1.0E-87 T 12-10-2018 IPR029056 Ribokinase-like K04M3_33660 12c88f4b851ab7abf6e84a1bdd794f3e 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.915 T 12-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 K04M3_33660 12c88f4b851ab7abf6e84a1bdd794f3e 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 3.7E-104 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 Gene3D G3DSA:3.30.250.10 268 326 1.1E-25 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 SMART SM00382 57 228 4.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 SUPERFAMILY SSF54752 269 325 4.32E-21 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.0E-142 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 297 314 3.3E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 93 122 3.3E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 243 272 3.3E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 210 238 3.3E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 127 156 3.3E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 PRINTS PR00142 RecA protein signature 165 194 3.3E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 Gene3D G3DSA:3.40.50.300 26 267 1.4E-82 T 12-10-2018 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.4E-169 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26640 271ab273b020c932eee65a28e66feb6d 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.543 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_38640 5a49ea5d8bf57cf610621a1e3e4cd4ee 157 Gene3D G3DSA:2.60.40.1890 37 151 8.9E-38 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily K04M3_38640 5a49ea5d8bf57cf610621a1e3e4cd4ee 157 Pfam PF04314 Copper chaperone PCu(A)C 33 141 1.2E-38 T 12-10-2018 IPR007410 Copper chaperone PCuAC K04M3_38640 5a49ea5d8bf57cf610621a1e3e4cd4ee 157 SUPERFAMILY SSF110087 8 149 4.18E-50 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 SMART SM01232 129 221 6.6E-44 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.9E-94 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.9E-32 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 Gene3D G3DSA:1.10.8.50 131 269 1.3E-46 T 12-10-2018 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 SUPERFAMILY SSF46946 130 221 1.26E-29 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 4.1E-27 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 2.6E-8 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 SUPERFAMILY SSF57716 217 269 2.85E-16 T 12-10-2018 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 Gene3D G3DSA:3.20.190.10 2 128 3.8E-42 T 12-10-2018 IPR035937 MutM-like, N-terminal K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.38 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 SUPERFAMILY SSF81624 2 138 2.75E-41 T 12-10-2018 IPR035937 MutM-like, N-terminal K04M3_01720 3a04d734cbf3cd4e379341b9e2c592aa 269 SMART SM00898 2 115 6.4E-53 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 Gene3D G3DSA:3.40.50.720 1 249 2.0E-66 T 12-10-2018 K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 3.9E-52 T 12-10-2018 K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46160 40fb654f670f5139203f7d1f094d5319 253 SUPERFAMILY SSF51735 5 244 2.41E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 SUPERFAMILY SSF52540 304 553 7.56E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 Gene3D G3DSA:3.40.50.300 301 571 1.0E-85 T 12-10-2018 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 Gene3D G3DSA:3.40.50.300 1 289 1.3E-86 T 12-10-2018 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 SMART SM00382 338 534 8.0E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 SMART SM00382 32 231 2.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF00005 ABC transporter 24 181 8.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.7E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 567 7.9E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF00005 ABC transporter 330 483 4.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 SUPERFAMILY SSF52540 3 253 1.07E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00430 a6fc534ab7c3091f7ec5892295820c12 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 Gene3D G3DSA:1.10.8.1080 226 303 3.0E-29 T 12-10-2018 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 Pfam PF13580 SIS domain 49 172 1.9E-10 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 Gene3D G3DSA:3.40.50.10490 8 225 5.3E-83 T 12-10-2018 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 SUPERFAMILY SSF53697 12 255 2.97E-76 T 12-10-2018 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.188 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 K04M3_05110 d7b1b052132703d4e67e9a41e915c981 309 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 2.0E-130 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 K04M3_18220 c0c8963a87a9e64e1a619842100d33ac 115 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 5 24 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type K04M3_18220 c0c8963a87a9e64e1a619842100d33ac 115 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 54 114 4.5E-20 T 12-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 3.9E-46 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 Gene3D G3DSA:3.40.630.10 9 364 1.0E-127 T 12-10-2018 K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 SUPERFAMILY SSF55031 181 291 3.44E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 Gene3D G3DSA:3.30.70.360 181 294 1.0E-127 T 12-10-2018 K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.869 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 9.3E-178 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.4E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain K04M3_23060 05a622c82d00732a15f02f3a7aa701a1 378 SUPERFAMILY SSF53187 6 376 1.55E-66 T 12-10-2018 K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 Pfam PF11842 Domain of unknown function (DUF3362) 585 721 1.5E-42 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 SMART SM00729 367 617 1.6E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 Pfam PF08497 Radical SAM N-terminal 24 370 1.1E-142 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 6.9E-263 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 Gene3D G3DSA:3.80.30.20 366 628 2.4E-13 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 Pfam PF04055 Radical SAM superfamily 371 576 6.9E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 SUPERFAMILY SSF102114 370 605 4.84E-11 T 12-10-2018 K04M3_20390 66e4bbececf3e5d00af7fed34d23d15e 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.091 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 K04M3_12640 8eddc0677422b163b071fe2c92441b27 234 Pfam PF14337 Domain of unknown function (DUF4393) 84 155 4.1E-7 T 12-10-2018 IPR025506 Protein of unknown function DUF4393 K04M3_25650 f5afd1b2ce94c369ad267b3d5363c69f 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 2.0E-21 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal K04M3_25650 f5afd1b2ce94c369ad267b3d5363c69f 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.535 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 K04M3_25650 f5afd1b2ce94c369ad267b3d5363c69f 151 Pfam PF02576 RimP N-terminal domain 13 83 5.2E-29 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal K04M3_25650 f5afd1b2ce94c369ad267b3d5363c69f 151 SUPERFAMILY SSF74942 84 151 4.18E-18 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily K04M3_25650 f5afd1b2ce94c369ad267b3d5363c69f 151 SUPERFAMILY SSF75420 2 83 1.19E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily K04M3_25650 f5afd1b2ce94c369ad267b3d5363c69f 151 Gene3D G3DSA:3.30.300.70 1 80 2.1E-26 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily K04M3_05050 fc4d823f342c5e658e06655e0e6f2d9b 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 94 6.5E-12 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I K04M3_05050 fc4d823f342c5e658e06655e0e6f2d9b 156 Gene3D G3DSA:3.40.50.2300 1 137 1.5E-22 T 12-10-2018 K04M3_05050 fc4d823f342c5e658e06655e0e6f2d9b 156 SMART SM00226 2 129 1.5E-6 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I K04M3_05050 fc4d823f342c5e658e06655e0e6f2d9b 156 SUPERFAMILY SSF52788 1 137 1.24E-24 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily K04M3_37050 c316eeb2b8b707b06e55089687bb9ab7 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 116 7.0E-20 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 K04M3_37050 c316eeb2b8b707b06e55089687bb9ab7 133 Gene3D G3DSA:3.90.1590.10 1 119 6.0E-13 T 12-10-2018 K04M3_37050 c316eeb2b8b707b06e55089687bb9ab7 133 SUPERFAMILY SSF51316 3 130 3.14E-29 T 12-10-2018 IPR011057 Mss4-like superfamily K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 SUPERFAMILY SSF141868 521 766 1.29E-66 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 Gene3D G3DSA:3.20.20.450 518 771 3.0E-72 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 SUPERFAMILY SSF55073 345 507 5.96E-37 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 Pfam PF00563 EAL domain 522 754 1.3E-60 T 12-10-2018 IPR001633 EAL domain K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 SMART SM00052 516 759 9.4E-61 T 12-10-2018 IPR001633 EAL domain K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 1.1E-30 T 12-10-2018 IPR000160 GGDEF domain K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 Gene3D G3DSA:3.30.70.270 334 517 5.0E-45 T 12-10-2018 K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 3.9E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_43480 f7f2ae5d95fb7a9730499adfb6d35169 786 SMART SM00267 329 506 1.3E-41 T 12-10-2018 IPR000160 GGDEF domain K04M3_38360 6d58afec2560f7f34e4310f080eb72ed 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_38360 6d58afec2560f7f34e4310f080eb72ed 296 Gene3D G3DSA:3.40.190.290 91 295 2.1E-35 T 12-10-2018 K04M3_38360 6d58afec2560f7f34e4310f080eb72ed 296 Pfam PF03466 LysR substrate binding domain 88 286 1.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_38360 6d58afec2560f7f34e4310f080eb72ed 296 SUPERFAMILY SSF53850 89 290 3.96E-34 T 12-10-2018 K04M3_38360 6d58afec2560f7f34e4310f080eb72ed 296 Gene3D G3DSA:1.10.10.10 1 82 1.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_38360 6d58afec2560f7f34e4310f080eb72ed 296 SUPERFAMILY SSF46785 2 111 1.22E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 SUPERFAMILY SSF53850 91 302 7.06E-23 T 12-10-2018 K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 Gene3D G3DSA:1.10.10.10 6 96 7.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 Gene3D G3DSA:3.40.190.10 101 298 1.4E-44 T 12-10-2018 K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 SUPERFAMILY SSF46785 9 111 1.58E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 Gene3D G3DSA:3.40.190.10 161 275 1.4E-44 T 12-10-2018 K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 Pfam PF03466 LysR substrate binding domain 91 298 4.6E-21 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_06110 a25d8c76c052a051b4c72ac5baa4a007 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 4.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 SMART SM00116 159 215 0.011 T 12-10-2018 IPR000644 CBS domain K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 SMART SM00116 232 279 1.6E-4 T 12-10-2018 IPR000644 CBS domain K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 SMART SM00100 17 134 9.4E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.6E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 5.4E-47 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF00571 CBS domain 225 277 4.2E-11 T 12-10-2018 IPR000644 CBS domain K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF00571 CBS domain 153 211 8.1E-8 T 12-10-2018 IPR000644 CBS domain K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 SUPERFAMILY SSF51206 7 133 1.7E-27 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Gene3D G3DSA:2.60.120.10 1 144 2.7E-23 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Gene3D G3DSA:3.10.580.10 145 281 5.3E-33 T 12-10-2018 K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 6.0E-44 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding K04M3_14640 7bb47928b03c8ee98e5fdc9d18760561 626 SUPERFAMILY SSF54631 146 278 1.39E-28 T 12-10-2018 K04M3_32130 b00dd5cd5ed0c70ee590eb6539765052 312 Gene3D G3DSA:3.30.470.10 10 127 2.2E-106 T 12-10-2018 K04M3_32130 b00dd5cd5ed0c70ee590eb6539765052 312 Pfam PF01063 Amino-transferase class IV 36 268 2.4E-45 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 K04M3_32130 b00dd5cd5ed0c70ee590eb6539765052 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 K04M3_32130 b00dd5cd5ed0c70ee590eb6539765052 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.1E-142 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 K04M3_32130 b00dd5cd5ed0c70ee590eb6539765052 312 Gene3D G3DSA:3.20.10.10 138 289 2.2E-106 T 12-10-2018 K04M3_32130 b00dd5cd5ed0c70ee590eb6539765052 312 SUPERFAMILY SSF56752 7 307 1.16E-102 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 SUPERFAMILY SSF46785 5 104 2.59E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 Pfam PF03466 LysR substrate binding domain 89 292 1.5E-7 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 Gene3D G3DSA:3.40.190.10 93 285 4.2E-9 T 12-10-2018 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 Gene3D G3DSA:3.40.190.10 167 271 4.2E-9 T 12-10-2018 K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 Gene3D G3DSA:1.10.10.10 3 87 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46100 b5a8997796e91c0bb66310464ac485f9 303 SUPERFAMILY SSF53850 90 288 6.15E-18 T 12-10-2018 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.949 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 SUPERFAMILY SSF52954 463 570 8.91E-34 T 12-10-2018 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 SUPERFAMILY SSF55826 218 390 2.88E-31 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Gene3D G3DSA:3.30.930.10 11 465 5.1E-234 T 12-10-2018 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 9.2E-27 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 6.6E-246 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Gene3D G3DSA:3.40.50.800 4 555 5.1E-234 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Gene3D G3DSA:3.90.960.10 240 389 5.1E-234 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 SUPERFAMILY SSF55681 10 478 2.13E-97 T 12-10-2018 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Pfam PF03129 Anticodon binding domain 475 568 1.6E-22 T 12-10-2018 IPR004154 Anticodon-binding K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 PIRSF PIRSF001535 1 571 4.1E-265 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 K04M3_24200 ee1488031a5c031772c98efc5aa5522f 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 9.1E-39 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_20250 b054d2f10348af62f658ad4e3be517a7 513 Pfam PF00501 AMP-binding enzyme 8 416 8.1E-115 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_20250 b054d2f10348af62f658ad4e3be517a7 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_20250 b054d2f10348af62f658ad4e3be517a7 513 Gene3D G3DSA:3.40.50.12780 1 409 6.5E-129 T 12-10-2018 K04M3_20250 b054d2f10348af62f658ad4e3be517a7 513 Gene3D G3DSA:3.30.300.310 412 512 1.1E-30 T 12-10-2018 K04M3_20250 b054d2f10348af62f658ad4e3be517a7 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 1.7E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_20250 b054d2f10348af62f658ad4e3be517a7 513 SUPERFAMILY SSF56801 4 508 4.71E-162 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.6E-28 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.30.70.370 663 924 1.6E-113 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00482 685 892 5.9E-117 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00475 7 267 2.8E-123 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF47807 171 291 5.53E-30 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.40.50.1010 9 284 1.2E-94 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:1.20.1060.10 542 657 7.1E-44 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:3.30.420.10 326 541 5.5E-67 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00474 329 516 1.4E-37 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:1.10.150.20 708 851 1.6E-113 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 6.5E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Gene3D G3DSA:1.10.150.20 174 253 1.2E-94 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 2.3E-287 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF53098 332 517 1.01E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF00476 DNA polymerase family A 550 925 1.1E-157 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 ProSitePatterns PS00447 DNA polymerase family A signature. 753 772 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF56672 522 928 2.0E-160 T 12-10-2018 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SUPERFAMILY SSF88723 7 170 1.4E-57 T 12-10-2018 IPR029060 PIN-like domain superfamily K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 SMART SM00279 173 208 1.2E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 Pfam PF01612 3'-5' exonuclease 329 513 3.2E-36 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 692 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 722 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 812 823 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 654 676 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 729 742 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 844 860 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_00950 ef9d11ddca88c75c89bbe6d3adb128ac 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 778 5.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 Gene3D G3DSA:3.20.20.140 73 371 1.1E-158 T 12-10-2018 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.33 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 Gene3D G3DSA:2.30.40.10 7 408 1.1E-158 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 Pfam PF01979 Amidohydrolase family 69 408 2.4E-16 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 1.2E-150 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 SUPERFAMILY SSF51338 1 411 3.49E-24 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_12320 032b37a848f0235faafef904ebcbbeb5 416 SUPERFAMILY SSF51556 72 371 4.44E-82 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 Gene3D G3DSA:1.10.10.60 162 266 8.4E-28 T 12-10-2018 K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 Pfam PF12833 Helix-turn-helix domain 185 262 2.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 6.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 6.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 SUPERFAMILY SSF51215 24 147 2.48E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 SUPERFAMILY SSF46689 215 264 2.33E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_37930 4be8f0597500351da796607a0c6f0dae 269 SMART SM00342 179 261 1.3E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 SUPERFAMILY SSF51419 49 283 6.02E-49 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 272 4.7E-52 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 Gene3D G3DSA:2.40.37.10 45 404 1.7E-130 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 313 328 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 166 178 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 68 84 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 334 351 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 202 213 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 104 122 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 PRINTS PR00992 Alanine racemase signature 245 272 1.3E-30 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 SUPERFAMILY SSF50621 273 408 2.3E-40 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 Hamap MF_01201 Alanine racemase. 42 408 26.497 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 SMART SM01005 280 408 1.6E-49 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 Gene3D G3DSA:3.20.20.10 51 268 1.7E-130 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 Pfam PF00842 Alanine racemase, C-terminal domain 281 407 7.2E-33 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_39350 abd3412cbbfe48c470fcd2de941cb0a1 409 TIGRFAM TIGR00492 alr: alanine racemase 45 408 1.5E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 SUPERFAMILY SSF51230 1 94 5.89E-24 T 12-10-2018 IPR011053 Single hybrid motif K04M3_08430 b63245be625f656df068f41232d3f0e3 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 5.1E-187 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 Pfam PF02817 e3 binding domain 113 146 1.9E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 4.0E-82 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 Pfam PF00364 Biotin-requiring enzyme 4 76 2.5E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_08430 b63245be625f656df068f41232d3f0e3 402 Gene3D G3DSA:2.40.50.100 1 79 6.9E-22 T 12-10-2018 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 SUPERFAMILY SSF47005 106 150 2.62E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 Gene3D G3DSA:4.10.320.10 102 152 1.1E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 SUPERFAMILY SSF52777 173 401 3.51E-90 T 12-10-2018 K04M3_08430 b63245be625f656df068f41232d3f0e3 402 Gene3D G3DSA:3.30.559.10 170 402 7.4E-98 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 9.7E-11 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 SUPERFAMILY SSF53244 338 489 8.55E-50 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 SUPERFAMILY SSF53623 109 336 1.31E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Gene3D G3DSA:3.40.1190.10 108 339 4.6E-79 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Pfam PF08245 Mur ligase middle domain 115 316 5.3E-51 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.775 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Gene3D G3DSA:3.40.1390.10 4 106 6.9E-26 T 12-10-2018 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 1.7E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 Gene3D G3DSA:3.90.190.20 340 491 1.3E-55 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 2.3E-168 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 K04M3_04250 42520ea792086d3a2b47305eafeaab29 493 SUPERFAMILY SSF63418 18 105 1.28E-20 T 12-10-2018 IPR035911 MurE/MurF, N-terminal K04M3_23480 5b053fbc478ea81efa30fc57c41d14e3 447 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 30 435 1.7E-108 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 K04M3_23480 5b053fbc478ea81efa30fc57c41d14e3 447 Gene3D G3DSA:1.20.1530.10 24 285 9.0E-78 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily K04M3_23480 5b053fbc478ea81efa30fc57c41d14e3 447 Gene3D G3DSA:1.20.1530.10 293 443 1.1E-46 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily K04M3_23480 5b053fbc478ea81efa30fc57c41d14e3 447 Pfam PF06965 Na+/H+ antiporter 1 29 435 2.6E-129 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 K04M3_23480 5b053fbc478ea81efa30fc57c41d14e3 447 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 27 442 20.996 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 SMART SM00387 31 175 1.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Gene3D G3DSA:3.40.50.670 399 572 1.3E-75 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Gene3D G3DSA:3.10.20.690 593 684 1.6E-34 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 SUPERFAMILY SSF54211 221 393 7.4E-59 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.8E-29 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 5.2E-86 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 SUPERFAMILY SSF55874 4 212 5.5E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 4.2E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 12-10-2018 IPR006171 TOPRIM domain K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Pfam PF00204 DNA gyrase B 221 391 1.3E-60 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 SMART SM00433 35 798 4.1E-275 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Gene3D G3DSA:3.40.50.670 706 804 3.1E-26 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 SUPERFAMILY SSF56719 395 796 7.85E-88 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.309 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Gene3D G3DSA:3.30.230.10 221 393 5.1E-73 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 Gene3D G3DSA:3.30.565.10 1 220 7.5E-95 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.7E-70 T 12-10-2018 K04M3_00040 b366bd2bd9e2acd1eb049a5f6ce8a3a8 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.7E-70 T 12-10-2018 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 5.7E-26 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 SUPERFAMILY SSF56645 1 240 4.84E-78 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 Gene3D G3DSA:2.40.110.10 120 231 7.3E-42 T 12-10-2018 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 SUPERFAMILY SSF47203 225 378 1.35E-58 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.4E-49 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 PIRSF PIRSF016578 225 379 3.5E-13 T 12-10-2018 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 PIRSF PIRSF016578 4 192 5.4E-11 T 12-10-2018 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 Gene3D G3DSA:1.20.140.10 232 382 1.4E-53 T 12-10-2018 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 Gene3D G3DSA:1.10.540.10 1 119 2.1E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_43770 ab1cb87f82705bf0e03a3e5192712213 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 7.7E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 K04M3_34940 81e58be636de43962fd7120317ef57a0 563 Pfam PF02652 L-lactate permease 7 548 1.4E-107 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 K04M3_34940 81e58be636de43962fd7120317ef57a0 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 1.5E-103 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 Gene3D G3DSA:3.30.420.380 3 234 2.2E-86 T 12-10-2018 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 Gene3D G3DSA:3.30.1360.100 314 400 4.1E-32 T 12-10-2018 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 SUPERFAMILY SSF53067 2 144 5.76E-42 T 12-10-2018 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 Gene3D G3DSA:3.30.420.370 142 212 2.2E-86 T 12-10-2018 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 Pfam PF12693 GspL periplasmic domain 241 399 4.0E-52 T 12-10-2018 IPR025691 GspL periplasmic domain K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 PIRSF PIRSF015761 7 400 4.9E-37 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 Pfam PF05134 Type II secretion system (T2SS), protein L 5 237 1.9E-81 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 398 2.5E-94 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 K04M3_01270 e56efd50e66a22f129057bd285f9c11e 400 SUPERFAMILY SSF53067 147 235 9.32E-23 T 12-10-2018 K04M3_49060 689572d2480ecee4e72d9d859a0d63ed 288 SUPERFAMILY SSF56281 7 263 2.94E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_49060 689572d2480ecee4e72d9d859a0d63ed 288 SMART SM00849 38 223 6.6E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_49060 689572d2480ecee4e72d9d859a0d63ed 288 Gene3D G3DSA:3.60.15.10 23 259 4.1E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_49060 689572d2480ecee4e72d9d859a0d63ed 288 Pfam PF00753 Metallo-beta-lactamase superfamily 38 223 4.9E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_28190 d088eab5cd6ee1942dc784d22c2ee5cf 189 Pfam PF02545 Maf-like protein 7 187 1.6E-60 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_28190 d088eab5cd6ee1942dc784d22c2ee5cf 189 Gene3D G3DSA:3.90.950.10 5 189 1.5E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_28190 d088eab5cd6ee1942dc784d22c2ee5cf 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.724 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_28190 d088eab5cd6ee1942dc784d22c2ee5cf 189 SUPERFAMILY SSF52972 5 187 3.66E-63 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_28190 d088eab5cd6ee1942dc784d22c2ee5cf 189 PIRSF PIRSF006305 2 189 6.4E-58 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_28190 d088eab5cd6ee1942dc784d22c2ee5cf 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 2.4E-55 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 Gene3D G3DSA:1.10.287.950 306 638 1.2E-76 T 12-10-2018 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 SMART SM00304 307 361 2.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 SUPERFAMILY SSF58104 329 638 3.53E-78 T 12-10-2018 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 SMART SM00283 376 637 4.6E-85 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 Pfam PF00672 HAMP domain 308 357 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 3.0E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 304 1.5E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 1.5E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 1.5E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_35420 a702df4e1b346f8fb26d88861b899622 638 Gene3D G3DSA:3.30.450.20 172 283 1.9E-16 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.3E-20 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 5.3E-20 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 5.3E-20 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 5.3E-20 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.3E-20 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 Gene3D G3DSA:3.30.390.120 314 376 3.3E-8 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 SUPERFAMILY SSF51905 144 300 1.37E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 3.0E-12 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.0E-12 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 3.0E-12 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 3.0E-12 T 12-10-2018 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 284 8.0E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 Gene3D G3DSA:3.50.50.60 108 242 1.7E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 Gene3D G3DSA:3.50.50.60 6 278 1.7E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_35710 73c5e8ec343ed485ff1cff0df329dbf5 382 SUPERFAMILY SSF51905 2 187 5.46E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_08820 dd799f319147a750f433130c128ae88e 780 SUPERFAMILY SSF82866 618 771 6.93E-21 T 12-10-2018 K04M3_08820 dd799f319147a750f433130c128ae88e 780 SUPERFAMILY SSF82866 209 408 1.31E-20 T 12-10-2018 K04M3_08820 dd799f319147a750f433130c128ae88e 780 Pfam PF03176 MMPL family 72 414 8.9E-12 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 K04M3_18530 bb66e1cc48a03ac422b0f8c8ae46d674 377 Pfam PF01699 Sodium/calcium exchanger protein 43 196 2.3E-12 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 K04M3_18530 bb66e1cc48a03ac422b0f8c8ae46d674 377 Pfam PF01699 Sodium/calcium exchanger protein 234 374 3.6E-9 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 K04M3_18530 bb66e1cc48a03ac422b0f8c8ae46d674 377 Gene3D G3DSA:1.20.58.1130 212 265 5.1E-7 T 12-10-2018 K04M3_18530 bb66e1cc48a03ac422b0f8c8ae46d674 377 Gene3D G3DSA:1.20.1420.30 154 367 5.1E-7 T 12-10-2018 K04M3_04790 c139870bbe196f1f1c6203c71022d52c 281 Pfam PF13098 Thioredoxin-like domain 151 278 2.4E-24 T 12-10-2018 IPR012336 Thioredoxin-like fold K04M3_04790 c139870bbe196f1f1c6203c71022d52c 281 Gene3D G3DSA:3.40.30.10 121 280 4.5E-45 T 12-10-2018 K04M3_04790 c139870bbe196f1f1c6203c71022d52c 281 Gene3D G3DSA:3.10.450.70 57 120 1.1E-18 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 K04M3_04790 c139870bbe196f1f1c6203c71022d52c 281 SUPERFAMILY SSF54423 63 119 4.05E-14 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 K04M3_04790 c139870bbe196f1f1c6203c71022d52c 281 SUPERFAMILY SSF52833 140 280 4.09E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_04790 c139870bbe196f1f1c6203c71022d52c 281 Pfam PF10411 Disulfide bond isomerase protein N-terminus 69 117 1.8E-12 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 4.6E-28 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF50800 70 167 1.59E-29 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.40.1380.20 336 467 2.9E-41 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF52935 323 469 7.06E-34 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:2.40.33.10 71 167 2.4E-149 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.9E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF51621 1 339 6.98E-103 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.9E-189 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.20.20.60 4 332 2.4E-149 T 12-10-2018 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.5E-155 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_03590 9d78a1d8864b4b0c735f1aba430eb7d0 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Gene3D G3DSA:3.40.190.10 40 115 8.4E-12 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 SUPERFAMILY SSF55073 516 657 5.57E-27 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 SUPERFAMILY SSF53850 251 469 1.41E-21 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 196 6.0E-20 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 SMART SM00267 500 661 7.6E-20 T 12-10-2018 IPR000160 GGDEF domain K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 259 468 3.8E-16 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Gene3D G3DSA:3.40.190.10 116 180 1.5E-7 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Gene3D G3DSA:3.40.190.10 336 433 8.3E-17 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 SUPERFAMILY SSF53850 44 206 1.79E-26 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 SMART SM00062 29 227 1.8E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Gene3D G3DSA:3.40.190.10 249 463 8.3E-17 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 659 2.0E-28 T 12-10-2018 IPR000160 GGDEF domain K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Gene3D G3DSA:3.30.70.270 504 660 2.2E-31 T 12-10-2018 K04M3_09510 db9c4799f188ab042ef7e3d90ec05a46 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 5.5E-26 T 12-10-2018 IPR000160 GGDEF domain K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 Gene3D G3DSA:3.10.105.10 313 528 8.4E-195 T 12-10-2018 K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 104 125 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 PIRSF PIRSF002741 3 558 1.7E-117 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 Gene3D G3DSA:3.90.76.10 88 211 8.4E-195 T 12-10-2018 K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 Gene3D G3DSA:3.40.190.10 58 540 8.4E-195 T 12-10-2018 K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 SUPERFAMILY SSF53850 56 546 1.05E-149 T 12-10-2018 K04M3_21470 8409a90f62284266cfdd1e01bcffe89b 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 478 4.8E-95 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 3.6E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 Pfam PF13307 Helicase C-terminal domain 526 684 7.8E-37 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.419 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 Gene3D G3DSA:3.40.50.300 499 689 7.5E-34 T 12-10-2018 K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 SMART SM00491 535 671 1.1E-27 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 SUPERFAMILY SSF52540 14 666 1.94E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 SUPERFAMILY SSF52540 243 666 2.17E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09970 c05a4ee6994109bdb1aaf94fc0301be4 691 Gene3D G3DSA:3.40.50.300 25 304 2.6E-40 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 25 339 1.7E-135 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Pfam PF12826 Helix-hairpin-helix motif 531 594 3.2E-23 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SUPERFAMILY SSF56091 24 337 1.47E-124 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:3.40.50.10190 604 690 8.9E-27 T 12-10-2018 IPR036420 BRCT domain superfamily K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Hamap MF_01588 DNA ligase [ligA]. 23 689 54.192 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SMART SM00532 24 469 3.7E-279 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 615 688 1.0E-13 T 12-10-2018 IPR001357 BRCT domain K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:3.30.470.90 90 338 1.7E-103 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:1.10.287.610 22 89 1.1E-27 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SUPERFAMILY SSF47781 424 605 5.93E-62 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 32 685 5.9E-269 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:1.10.150.20 527 603 3.0E-29 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 428 455 9.3E-12 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:2.40.50.140 339 411 1.1E-34 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 136 165 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:1.10.150.20 453 526 1.5E-29 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SUPERFAMILY SSF50249 339 420 9.25E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SMART SM00292 615 690 7.6E-11 T 12-10-2018 IPR001357 BRCT domain K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SUPERFAMILY SSF52113 614 689 1.78E-18 T 12-10-2018 IPR036420 BRCT domain superfamily K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 343 419 8.1E-36 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 PIRSF PIRSF001604 18 690 5.3E-257 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Gene3D G3DSA:2.20.70.80 412 452 1.1E-19 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 Pfam PF14520 Helix-hairpin-helix domain 467 523 1.3E-5 T 12-10-2018 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SMART SM00278 501 520 11.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SMART SM00278 467 486 95.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 SMART SM00278 565 584 270.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_07890 78fc53bc597d8d9a945e8d7c022c7bf4 690 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 352 367 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site K04M3_02790 e4318056a94dd77234c2a3881dd8072a 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.9E-43 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02790 e4318056a94dd77234c2a3881dd8072a 117 SUPERFAMILY SSF53137 3 115 3.49E-51 T 12-10-2018 K04M3_02790 e4318056a94dd77234c2a3881dd8072a 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.638 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02790 e4318056a94dd77234c2a3881dd8072a 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 9.3E-44 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02790 e4318056a94dd77234c2a3881dd8072a 117 Gene3D G3DSA:3.30.420.100 1 117 4.8E-44 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.0E-14 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Pfam PF01590 GAF domain 17 152 4.6E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Gene3D G3DSA:3.20.20.60 400 739 3.0E-104 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 SUPERFAMILY SSF51621 423 714 3.14E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Gene3D G3DSA:1.10.274.10 190 314 5.3E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 SUPERFAMILY SSF47831 204 311 5.89E-27 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 7.9E-96 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 4.8E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 SMART SM00065 17 163 1.7E-20 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 SUPERFAMILY SSF55781 2 158 3.27E-31 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 1.4E-136 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Gene3D G3DSA:3.30.450.40 1 160 3.9E-40 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 Gene3D G3DSA:3.50.30.10 173 399 5.3E-57 T 12-10-2018 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 SUPERFAMILY SSF52009 293 412 1.96E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 K04M3_04900 cfba6779aa4ea836938a8333b83dfea0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 SMART SM00642 27 438 2.3E-56 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 PIRSF PIRSF001021 3 507 8.8E-226 T 12-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 Gene3D G3DSA:2.40.30.140 127 229 4.9E-155 T 12-10-2018 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 Pfam PF00128 Alpha amylase, catalytic domain 57 387 7.9E-25 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 SUPERFAMILY SSF51011 420 504 4.93E-31 T 12-10-2018 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 Gene3D G3DSA:3.20.20.80 28 392 4.9E-155 T 12-10-2018 K04M3_39910 449c0831382254db8bb14d435074a4e0 507 SUPERFAMILY SSF51445 28 393 5.05E-94 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_39910 449c0831382254db8bb14d435074a4e0 507 Gene3D G3DSA:2.60.40.1180 423 505 1.1E-26 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_40370 89e2b41981d8a835f7df817678064543 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 4.0E-12 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_40370 89e2b41981d8a835f7df817678064543 287 Gene3D G3DSA:3.60.10.10 16 286 1.4E-27 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_40370 89e2b41981d8a835f7df817678064543 287 SUPERFAMILY SSF56219 20 285 9.55E-30 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 Pfam PF01264 Chorismate synthase 10 345 2.6E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 PIRSF PIRSF001456 3 360 7.9E-143 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 7.0E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.738 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 Gene3D G3DSA:3.60.150.10 1 361 1.1E-160 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_22390 292d5fcd994bd7a05709ea1f75b0d663 361 SUPERFAMILY SSF103263 4 354 2.35E-150 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 K04M3_00600 dd53e2308adbb5ea74fcf4c124298ce0 680 Pfam PF01432 Peptidase family M3 222 677 8.8E-164 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 K04M3_00600 dd53e2308adbb5ea74fcf4c124298ce0 680 SUPERFAMILY SSF55486 1 677 1.83E-213 T 12-10-2018 K04M3_00600 dd53e2308adbb5ea74fcf4c124298ce0 680 Gene3D G3DSA:1.10.1370.10 140 610 3.7E-270 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 K04M3_00600 dd53e2308adbb5ea74fcf4c124298ce0 680 Gene3D G3DSA:1.10.1370.40 13 675 3.7E-270 T 12-10-2018 K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 SUPERFAMILY SSF52096 141 461 1.03E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 Gene3D G3DSA:3.30.750.170 92 438 2.5E-68 T 12-10-2018 K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 SMART SM00245 234 452 0.0014 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 Gene3D G3DSA:3.90.226.10 248 486 2.5E-68 T 12-10-2018 K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 Gene3D G3DSA:2.30.42.10 142 247 2.5E-68 T 12-10-2018 K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 SUPERFAMILY SSF50156 149 214 3.86E-8 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_13220 758ca4dd2fdf189f5de3a70ade85a99e 531 Pfam PF03572 Peptidase family S41 263 410 2.9E-22 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 499 51.142 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 SMART SM00490 257 338 1.6E-31 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 Pfam PF00270 DEAD/DEAH box helicase 26 194 1.3E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 Gene3D G3DSA:3.40.50.300 214 418 1.9E-45 T 12-10-2018 K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 Gene3D G3DSA:3.40.50.300 1 209 1.3E-76 T 12-10-2018 K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 SUPERFAMILY SSF52540 73 359 3.32E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 SMART SM00487 20 221 7.8E-64 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_46080 3c3382d6319ba47ee372f580b2dac093 522 Pfam PF00271 Helicase conserved C-terminal domain 232 338 1.5E-26 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_07700 11ba7cad45a2a93ede49adf00af63b90 236 Gene3D G3DSA:2.60.40.4070 111 197 2.6E-36 T 12-10-2018 K04M3_07700 11ba7cad45a2a93ede49adf00af63b90 236 Pfam PF13860 FlgD Ig-like domain 119 185 1.4E-19 T 12-10-2018 IPR025965 FlgD Ig-like domain K04M3_07700 11ba7cad45a2a93ede49adf00af63b90 236 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 86 5.9E-22 T 12-10-2018 IPR005648 Flagellar hook capping protein K04M3_07700 11ba7cad45a2a93ede49adf00af63b90 236 Pfam PF13861 FlgD Tudor-like domain 94 230 1.9E-15 T 12-10-2018 IPR025963 FlgD Tudor-like domain K04M3_07700 11ba7cad45a2a93ede49adf00af63b90 236 Gene3D G3DSA:2.30.30.910 99 223 2.6E-36 T 12-10-2018 K04M3_36930 51a1a41739cf606503fa624a1984eed3 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 312 4.8E-21 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_36930 51a1a41739cf606503fa624a1984eed3 585 Gene3D G3DSA:3.40.190.10 121 352 2.0E-31 T 12-10-2018 K04M3_36930 51a1a41739cf606503fa624a1984eed3 585 PIRSF PIRSF002741 422 583 0.0087 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_36930 51a1a41739cf606503fa624a1984eed3 585 PIRSF PIRSF002741 90 354 3.8E-30 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_36930 51a1a41739cf606503fa624a1984eed3 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 3.0E-33 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain K04M3_36930 51a1a41739cf606503fa624a1984eed3 585 SUPERFAMILY SSF53850 117 583 2.17E-61 T 12-10-2018 K04M3_43750 126c81b6c53add9cbfe8c1bc302a6705 376 SUPERFAMILY SSF52096 18 342 3.32E-55 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_43750 126c81b6c53add9cbfe8c1bc302a6705 376 Gene3D G3DSA:3.90.226.10 4 371 1.2E-115 T 12-10-2018 K04M3_43750 126c81b6c53add9cbfe8c1bc302a6705 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 356 1.8E-106 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 Pfam PF03600 Citrate transporter 28 518 9.8E-28 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 SUPERFAMILY SSF116726 206 283 6.02E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 Pfam PF02080 TrkA-C domain 209 276 1.5E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 Pfam PF02080 TrkA-C domain 293 349 1.0E-10 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 Gene3D G3DSA:3.30.70.1450 289 359 5.7E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 Gene3D G3DSA:3.30.70.1450 206 284 7.1E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_03000 57af1e76aec4e661df5790a5b34d6237 574 SUPERFAMILY SSF116726 290 349 1.44E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 Pfam PF01228 Glycine radical 690 793 5.1E-31 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 Gene3D G3DSA:3.20.70.20 7 812 2.1E-273 T 12-10-2018 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 PIRSF PIRSF000379 28 812 9.0E-169 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 7 812 0.0 T 12-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 SUPERFAMILY SSF51998 3 811 1.22E-221 T 12-10-2018 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 Pfam PF02901 Pyruvate formate lyase-like 8 673 1.4E-215 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 K04M3_34320 80ad2a695c2856274e59a99bbbb7c56e 812 ProSitePatterns PS00850 Glycine radical domain signature. 783 791 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 12-10-2018 IPR025505 FHIPEP conserved site K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 694 4.7E-237 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 Gene3D G3DSA:3.40.30.60 358 501 5.7E-45 T 12-10-2018 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 Pfam PF00771 FHIPEP family 25 687 2.3E-242 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 Gene3D G3DSA:1.10.490.80 592 695 5.0E-10 T 12-10-2018 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 PIRSF PIRSF005419 1 696 7.4E-224 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 K04M3_34500 42ca8979efbd358d2d4d574c37e50643 696 Gene3D G3DSA:1.10.8.540 502 589 3.6E-13 T 12-10-2018 K04M3_43870 2f96652c53c4c0e202114cf83d608650 288 SUPERFAMILY SSF82689 179 278 1.57E-27 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 K04M3_43870 2f96652c53c4c0e202114cf83d608650 288 Gene3D G3DSA:3.30.70.100 177 271 1.8E-24 T 12-10-2018 K04M3_43870 2f96652c53c4c0e202114cf83d608650 288 Pfam PF00924 Mechanosensitive ion channel 66 267 8.3E-51 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 K04M3_43870 2f96652c53c4c0e202114cf83d608650 288 SUPERFAMILY SSF82861 24 107 1.26E-11 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 K04M3_43870 2f96652c53c4c0e202114cf83d608650 288 SUPERFAMILY SSF50182 108 174 3.92E-18 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_43870 2f96652c53c4c0e202114cf83d608650 288 Gene3D G3DSA:2.30.30.60 124 173 2.1E-14 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily K04M3_23470 47c8c94ae2a7b2b643205b4b9f9e6c3a 330 PIRSF PIRSF005651 1 322 2.3E-92 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 K04M3_23470 47c8c94ae2a7b2b643205b4b9f9e6c3a 330 SUPERFAMILY SSF117892 55 219 1.57E-20 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_23470 47c8c94ae2a7b2b643205b4b9f9e6c3a 330 Pfam PF01145 SPFH domain / Band 7 family 26 224 1.5E-24 T 12-10-2018 IPR001107 Band 7 domain K04M3_23470 47c8c94ae2a7b2b643205b4b9f9e6c3a 330 SMART SM00244 22 214 2.8E-18 T 12-10-2018 IPR001107 Band 7 domain K04M3_23470 47c8c94ae2a7b2b643205b4b9f9e6c3a 330 TIGRFAM TIGR01932 hflC: HflC protein 8 316 1.6E-72 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 SUPERFAMILY SSF56954 171 261 3.79E-5 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Pfam PF13437 HlyD family secretion protein 316 426 4.5E-18 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:2.40.50.100 317 353 9.6E-14 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:2.40.50.100 69 103 1.4E-9 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 3.2E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 SUPERFAMILY SSF111369 64 130 8.11E-6 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 1.4E-134 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:2.40.30.170 354 441 9.6E-14 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:2.40.30.170 58 68 1.4E-9 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Pfam PF13533 Biotin-lipoyl like 75 108 1.8E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:1.10.287.470 192 316 9.6E-14 T 12-10-2018 K04M3_32620 a98f9c47e956046c10383652648e2f4f 463 Gene3D G3DSA:1.10.287.470 104 175 1.4E-9 T 12-10-2018 K04M3_29570 5df8d349c343da7f64c262aab34de946 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 4.8E-23 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 K04M3_29570 5df8d349c343da7f64c262aab34de946 375 SUPERFAMILY SSF54862 165 315 7.11E-20 T 12-10-2018 K04M3_29570 5df8d349c343da7f64c262aab34de946 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_29570 5df8d349c343da7f64c262aab34de946 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 4.1E-153 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 K04M3_29570 5df8d349c343da7f64c262aab34de946 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.752 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 K04M3_29570 5df8d349c343da7f64c262aab34de946 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 4.9E-20 T 12-10-2018 K04M3_30960 800157e8af6f8717e824fdb4a71ecac4 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.364 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 K04M3_30960 800157e8af6f8717e824fdb4a71ecac4 179 SUPERFAMILY SSF64288 7 174 7.38E-45 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_30960 800157e8af6f8717e824fdb4a71ecac4 179 Gene3D G3DSA:3.40.1410.10 9 174 1.6E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_30960 800157e8af6f8717e824fdb4a71ecac4 179 Pfam PF04345 Chorismate lyase 14 178 4.7E-57 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 2.2E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Gene3D G3DSA:3.30.70.920 54 137 3.0E-20 T 12-10-2018 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SUPERFAMILY SSF54909 63 145 1.74E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SUPERFAMILY SSF46785 1 60 5.47E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SMART SM00344 1 110 3.1E-37 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.7E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.7E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.7E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.1E-18 T 12-10-2018 K04M3_48920 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Gene3D G3DSA:1.10.10.10 2 53 9.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF00005 ABC transporter 340 473 4.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.7E-293 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 SMART SM00382 31 236 6.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 SMART SM00382 348 518 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 Gene3D G3DSA:3.40.50.300 1 285 4.5E-86 T 12-10-2018 K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 Gene3D G3DSA:3.40.50.300 286 555 2.9E-77 T 12-10-2018 K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 SUPERFAMILY SSF52540 9 242 4.85E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF00005 ABC transporter 22 191 2.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF12848 ABC transporter 230 306 4.1E-13 T 12-10-2018 IPR032781 ABC-transporter extension domain K04M3_05180 41ee39a091fadcbadff9a230f98da04a 555 SUPERFAMILY SSF52540 304 525 3.68E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_45570 a3563ec1b8112d85d855e1f94681f8ab 412 Gene3D G3DSA:1.10.4160.10 4 410 1.9E-45 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily K04M3_45570 a3563ec1b8112d85d855e1f94681f8ab 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 3.1E-62 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 K04M3_42230 e0e5b0b1ca43ba566f311f9be5998ef9 317 SUPERFAMILY SSF56219 5 312 3.53E-29 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_42230 e0e5b0b1ca43ba566f311f9be5998ef9 317 Gene3D G3DSA:3.60.10.10 2 312 7.8E-30 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_42230 e0e5b0b1ca43ba566f311f9be5998ef9 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 306 9.7E-8 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_09670 0645d283697467e566b1542adf456f89 1153 SMART SM00982 1008 1108 2.5E-47 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.0E-26 T 12-10-2018 IPR003711 CarD-like/TRCF domain K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:3.40.50.11140 356 453 2.2E-30 T 12-10-2018 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:3.30.2060.10 130 215 3.0E-121 T 12-10-2018 K04M3_09670 0645d283697467e566b1542adf456f89 1153 SUPERFAMILY SSF143517 994 1147 1.96E-43 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain K04M3_09670 0645d283697467e566b1542adf456f89 1153 SMART SM00490 826 910 5.4E-19 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_09670 0645d283697467e566b1542adf456f89 1153 SMART SM00487 600 790 1.9E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_09670 0645d283697467e566b1542adf456f89 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1108 28.033 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:3.40.50.300 542 781 3.1E-237 T 12-10-2018 K04M3_09670 0645d283697467e566b1542adf456f89 1153 SUPERFAMILY SSF52540 11 342 2.72E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09670 0645d283697467e566b1542adf456f89 1153 Pfam PF03461 TRCF domain 1010 1101 5.2E-28 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 8.4E-17 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_09670 0645d283697467e566b1542adf456f89 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 K04M3_09670 0645d283697467e566b1542adf456f89 1153 SMART SM01058 479 576 8.6E-53 T 12-10-2018 IPR003711 CarD-like/TRCF domain K04M3_09670 0645d283697467e566b1542adf456f89 1153 SUPERFAMILY SSF52540 782 990 4.15E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:3.40.50.11180 26 334 3.0E-121 T 12-10-2018 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:3.40.50.300 478 990 3.1E-237 T 12-10-2018 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.1E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:2.30.30.840 483 541 3.1E-237 T 12-10-2018 K04M3_09670 0645d283697467e566b1542adf456f89 1153 SUPERFAMILY SSF52540 523 783 4.65E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09670 0645d283697467e566b1542adf456f89 1153 SUPERFAMILY SSF52540 351 466 8.23E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09670 0645d283697467e566b1542adf456f89 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily K04M3_09670 0645d283697467e566b1542adf456f89 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 5.1E-45 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain K04M3_11860 99958b64e13b4a43a111887f03de7783 211 SUPERFAMILY SSF48498 80 207 1.96E-40 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_11860 99958b64e13b4a43a111887f03de7783 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_11860 99958b64e13b4a43a111887f03de7783 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site K04M3_11860 99958b64e13b4a43a111887f03de7783 211 Gene3D G3DSA:1.10.357.10 2 210 5.7E-54 T 12-10-2018 K04M3_11860 99958b64e13b4a43a111887f03de7783 211 SUPERFAMILY SSF46689 3 73 1.64E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_11860 99958b64e13b4a43a111887f03de7783 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_11860 99958b64e13b4a43a111887f03de7783 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_24480 3bdb8cc7603e0a2b4d7518253b3e06d2 84 SUPERFAMILY SSF47413 10 44 1.81E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_24480 3bdb8cc7603e0a2b4d7518253b3e06d2 84 Gene3D G3DSA:1.10.260.40 1 75 9.2E-15 T 12-10-2018 K04M3_24480 3bdb8cc7603e0a2b4d7518253b3e06d2 84 Pfam PF01381 Helix-turn-helix 11 39 6.3E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.6E-7 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 12-10-2018 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 SUPERFAMILY SSF48179 191 287 2.89E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 SUPERFAMILY SSF51735 1 194 1.88E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.7E-104 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 1.9E-33 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 SUPERFAMILY SSF52413 283 387 5.62E-28 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 PIRSF PIRSF000124 1 388 1.5E-137 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 SMART SM00984 300 387 3.9E-15 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.3E-27 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 Gene3D G3DSA:3.40.50.720 1 193 5.3E-60 T 12-10-2018 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 Gene3D G3DSA:3.40.50.720 222 388 1.3E-67 T 12-10-2018 K04M3_02210 58af4b958702c238b0ae97d3cb2cf6ee 388 PIRSF PIRSF500134 1 388 3.0E-122 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 K04M3_48160 2ae8f4cb85e8ee860ac3599110e5b938 331 Gene3D G3DSA:2.40.160.10 22 331 9.6E-45 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_48160 2ae8f4cb85e8ee860ac3599110e5b938 331 Pfam PF13609 Gram-negative porin 9 330 4.0E-14 T 12-10-2018 K04M3_48160 2ae8f4cb85e8ee860ac3599110e5b938 331 SUPERFAMILY SSF56935 22 331 1.19E-43 T 12-10-2018 K04M3_50160 b34ee4c0349ced929f60e179558d1b24 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 2.0E-14 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family K04M3_50160 b34ee4c0349ced929f60e179558d1b24 94 SUPERFAMILY SSF143011 1 82 2.09E-22 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily K04M3_50160 b34ee4c0349ced929f60e179558d1b24 94 Gene3D G3DSA:3.30.2310.20 1 94 3.7E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily K04M3_50160 b34ee4c0349ced929f60e179558d1b24 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 6.0E-12 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Gene3D G3DSA:3.30.450.40 4 173 2.0E-15 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 SUPERFAMILY SSF52540 214 450 3.0E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Gene3D G3DSA:3.40.50.300 196 382 4.9E-61 T 12-10-2018 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Pfam PF02954 Bacterial regulatory protein, Fis family 499 537 7.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 503 520 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 540 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 SUPERFAMILY SSF55781 10 181 1.07E-14 T 12-10-2018 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 SUPERFAMILY SSF46689 490 540 1.11E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 SMART SM00382 231 378 4.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Gene3D G3DSA:1.10.10.60 477 541 7.8E-14 T 12-10-2018 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Pfam PF00158 Sigma-54 interaction domain 213 377 3.9E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Pfam PF13185 GAF domain 26 148 2.6E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 Gene3D G3DSA:1.10.8.60 383 463 7.2E-21 T 12-10-2018 K04M3_44540 97f381e503e918d64dc1a3deaa2212a4 543 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 Gene3D G3DSA:1.10.287.180 1 76 7.5E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.628 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.7E-23 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 5.2E-23 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 PIRSF PIRSF006092 2 158 6.1E-43 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 SUPERFAMILY SSF54534 80 156 4.71E-19 T 12-10-2018 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 Gene3D G3DSA:3.10.50.30 77 159 1.9E-31 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 3.6E-72 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.134 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 K04M3_01380 6f36dc64f28d05fdda6ab8461e574053 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Gene3D G3DSA:1.10.1060.10 364 445 7.5E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Pfam PF10531 SLBB domain 296 345 4.1E-9 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 766 250.143 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 SUPERFAMILY SSF142019 95 302 3.01E-60 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Gene3D G3DSA:3.40.50.11540 145 291 2.8E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 SUPERFAMILY SSF46548 336 446 1.09E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 1.8E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 6.5E-34 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 Pfam PF12838 4Fe-4S dicluster domain 378 430 1.7E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_21610 93debf3df6492e8f99d4bcbded8c8827 878 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 2.2E-190 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 SUPERFAMILY SSF53178 5 194 2.09E-69 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.648 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 Gene3D G3DSA:3.40.50.1470 1 196 1.7E-76 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 2.2E-53 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 K04M3_07320 e8bbe2b9dce266f101d1014c6c9c9dea 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.3E-68 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 K04M3_37560 ae5440c8b0669f77a22a7f02dd90c1f6 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 K04M3_37560 ae5440c8b0669f77a22a7f02dd90c1f6 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 K04M3_37560 ae5440c8b0669f77a22a7f02dd90c1f6 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 1.6E-127 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 K04M3_37560 ae5440c8b0669f77a22a7f02dd90c1f6 382 SUPERFAMILY SSF56796 5 381 1.23E-137 T 12-10-2018 K04M3_37560 ae5440c8b0669f77a22a7f02dd90c1f6 382 Gene3D G3DSA:3.40.50.1970 2 183 4.5E-57 T 12-10-2018 K04M3_37560 ae5440c8b0669f77a22a7f02dd90c1f6 382 Gene3D G3DSA:1.20.1090.10 184 382 4.9E-79 T 12-10-2018 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 8.1E-45 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 SUPERFAMILY SSF64518 1 283 2.88E-79 T 12-10-2018 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 PRINTS PR00207 Flagellin signature 111 134 9.9E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 PRINTS PR00207 Flagellin signature 76 95 9.9E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 PRINTS PR00207 Flagellin signature 37 54 9.9E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 200 282 7.6E-28 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 Gene3D G3DSA:1.20.58.1830 7 33 1.1E-64 T 12-10-2018 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 Gene3D G3DSA:1.10.8.410 231 283 1.2E-19 T 12-10-2018 K04M3_34480 f34c392410830c6f2ad5bcb727d83d56 283 Gene3D G3DSA:1.20.1330.10 45 165 1.1E-64 T 12-10-2018 K04M3_22830 5fad72dc13ea002e13b9029bf58964ca 104 Pfam PF07978 NIPSNAP 5 74 1.4E-6 T 12-10-2018 IPR012577 NIPSNAP K04M3_22830 5fad72dc13ea002e13b9029bf58964ca 104 SUPERFAMILY SSF54909 3 96 1.21E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_22830 5fad72dc13ea002e13b9029bf58964ca 104 Gene3D G3DSA:3.30.70.100 1 102 2.0E-9 T 12-10-2018 K04M3_47830 74eb905308f0354d2091758bb26c7f69 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 2.9E-73 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 K04M3_47830 74eb905308f0354d2091758bb26c7f69 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.9E-23 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 K04M3_47830 74eb905308f0354d2091758bb26c7f69 402 Pfam PF07670 Nucleoside recognition 90 185 2.9E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_47830 74eb905308f0354d2091758bb26c7f69 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.1E-141 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 K04M3_39160 e6816f1e29eace6f849030e2af7ada47 96 Pfam PF05488 PAAR motif 18 86 4.0E-24 T 12-10-2018 IPR008727 PAAR motif K04M3_39160 e6816f1e29eace6f849030e2af7ada47 96 Gene3D G3DSA:2.60.200.60 1 52 3.6E-11 T 12-10-2018 K04M3_39160 e6816f1e29eace6f849030e2af7ada47 96 Gene3D G3DSA:2.60.200.60 53 95 5.1E-13 T 12-10-2018 K04M3_48310 f1e7606b5679995a83652f6affd705a8 252 PIRSF PIRSF028069 1 252 7.2E-109 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 K04M3_48310 f1e7606b5679995a83652f6affd705a8 252 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 8.2E-87 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF55785 115 210 2.84E-8 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF55073 258 412 2.75E-45 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF141868 427 674 1.96E-84 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.30.70.270 250 422 3.9E-49 T 12-10-2018 K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Pfam PF08448 PAS fold 15 119 1.6E-6 T 12-10-2018 IPR013656 PAS fold-4 K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SMART SM00052 420 666 7.4E-108 T 12-10-2018 IPR001633 EAL domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.30.450.20 128 237 9.0E-7 T 12-10-2018 K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 1.6E-36 T 12-10-2018 IPR000160 GGDEF domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 1.2E-7 T 12-10-2018 IPR000014 PAS domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Pfam PF13188 PAS domain 133 179 1.6E-4 T 12-10-2018 IPR000014 PAS domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SUPERFAMILY SSF55785 5 115 5.24E-10 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 2.5E-42 T 12-10-2018 IPR000160 GGDEF domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.20.20.450 423 675 5.1E-95 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SMART SM00091 131 198 0.054 T 12-10-2018 IPR000014 PAS domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SMART SM00091 8 74 0.0025 T 12-10-2018 IPR000014 PAS domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Pfam PF00563 EAL domain 427 661 6.6E-73 T 12-10-2018 IPR001633 EAL domain K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 Gene3D G3DSA:3.30.450.20 3 127 1.6E-11 T 12-10-2018 K04M3_25530 78d3d719e7025f1660bacf70082715e5 679 SMART SM00267 246 410 1.4E-52 T 12-10-2018 IPR000160 GGDEF domain K04M3_43230 dca05421115329948a740ba34175b4c8 151 Gene3D G3DSA:3.40.50.1380 1 151 6.1E-66 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily K04M3_43230 dca05421115329948a740ba34175b4c8 151 PIRSF PIRSF006614 8 151 1.4E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 K04M3_43230 dca05421115329948a740ba34175b4c8 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.795 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 K04M3_43230 dca05421115329948a740ba34175b4c8 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 4.5E-65 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 K04M3_43230 dca05421115329948a740ba34175b4c8 151 SMART SM00851 25 118 5.5E-23 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain K04M3_43230 dca05421115329948a740ba34175b4c8 151 SUPERFAMILY SSF52335 2 150 1.98E-58 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily K04M3_43230 dca05421115329948a740ba34175b4c8 151 Pfam PF02142 MGS-like domain 25 118 2.6E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain K04M3_43230 dca05421115329948a740ba34175b4c8 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 K04M3_38530 d4568104cc05767deddf36ff20d7d185 223 SUPERFAMILY SSF52317 1 222 3.23E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_38530 d4568104cc05767deddf36ff20d7d185 223 Gene3D G3DSA:3.40.50.880 1 223 4.7E-65 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_38530 d4568104cc05767deddf36ff20d7d185 223 Pfam PF01965 DJ-1/PfpI family 26 220 2.9E-13 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 K04M3_46750 9176c9d78d714525764aacd4dd559ffc 555 Pfam PF12793 Sugar transport-related sRNA regulator N-term 11 109 2.8E-17 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain K04M3_46750 9176c9d78d714525764aacd4dd559ffc 555 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 310 2.5E-22 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_46750 9176c9d78d714525764aacd4dd559ffc 555 SUPERFAMILY SSF53850 123 551 6.33E-48 T 12-10-2018 K04M3_46750 9176c9d78d714525764aacd4dd559ffc 555 Gene3D G3DSA:3.40.190.10 113 364 1.6E-34 T 12-10-2018 K04M3_41730 7d70844477b93a9fdc324d79a0d5f3a0 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 3.8E-34 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_41730 7d70844477b93a9fdc324d79a0d5f3a0 399 Gene3D G3DSA:3.40.50.720 1 397 7.8E-166 T 12-10-2018 K04M3_41730 7d70844477b93a9fdc324d79a0d5f3a0 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 8.7E-25 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_41730 7d70844477b93a9fdc324d79a0d5f3a0 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 2.0E-98 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_41730 7d70844477b93a9fdc324d79a0d5f3a0 399 SUPERFAMILY SSF51735 41 158 2.38E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_41730 7d70844477b93a9fdc324d79a0d5f3a0 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 52.03 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Gene3D G3DSA:3.20.20.140 1 270 2.4E-89 T 12-10-2018 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF02811 PHP domain 8 171 4.8E-41 T 12-10-2018 IPR004013 PHP domain GO:0003824 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 SMART SM00481 7 74 6.6E-25 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 9.4E-175 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 SUPERFAMILY SSF50249 976 1064 2.18E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.0E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.3E-32 T 12-10-2018 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 SUPERFAMILY SSF89550 5 263 6.47E-12 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Gene3D G3DSA:2.40.50.140 983 1072 4.0E-9 T 12-10-2018 K04M3_23850 6cf40b3fc9dbe2e11fa0e3f8f8c23506 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 5.0E-26 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_33390 47dce408a13855ebdeb9044204b04141 324 SUPERFAMILY SSF54427 12 152 1.4E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_33390 47dce408a13855ebdeb9044204b04141 324 SUPERFAMILY SSF54427 190 319 1.38E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_33390 47dce408a13855ebdeb9044204b04141 324 Pfam PF07366 SnoaL-like polyketide cyclase 20 144 2.4E-10 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 K04M3_33390 47dce408a13855ebdeb9044204b04141 324 Gene3D G3DSA:3.10.450.50 190 323 2.8E-17 T 12-10-2018 K04M3_33390 47dce408a13855ebdeb9044204b04141 324 Gene3D G3DSA:3.10.450.50 18 157 8.0E-21 T 12-10-2018 K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.642 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 6.6E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 SUPERFAMILY SSF109635 8 107 9.42E-37 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 12-10-2018 K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 Gene3D G3DSA:1.20.120.910 17 147 3.4E-36 T 12-10-2018 K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria K04M3_26080 4685b967c28dcb1e81fd981c03a134a4 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria K04M3_19520 9afd9a99a8e175267235cb0e0a0450c3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 K04M3_19520 9afd9a99a8e175267235cb0e0a0450c3 120 SUPERFAMILY SSF55620 1 118 5.56E-41 T 12-10-2018 K04M3_19520 9afd9a99a8e175267235cb0e0a0450c3 120 Gene3D G3DSA:3.30.479.10 1 120 8.5E-50 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 K04M3_19520 9afd9a99a8e175267235cb0e0a0450c3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-35 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 K04M3_19520 9afd9a99a8e175267235cb0e0a0450c3 120 PIRSF PIRSF006113 1 120 3.0E-53 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 K04M3_12270 5d34e2913e7bf26326724a46f0551e44 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 9.0E-18 T 12-10-2018 K04M3_12270 5d34e2913e7bf26326724a46f0551e44 153 Pfam PF04191 Phospholipid methyltransferase 40 142 5.3E-13 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 K04M3_12270 5d34e2913e7bf26326724a46f0551e44 153 Gene3D G3DSA:1.20.120.1630 3 153 3.0E-24 T 12-10-2018 K04M3_48350 cbbf9bf8cff57c71b66dee007ef16121 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 9.4E-39 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 K04M3_48350 cbbf9bf8cff57c71b66dee007ef16121 236 Gene3D G3DSA:3.20.20.190 1 236 1.2E-70 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 K04M3_48350 cbbf9bf8cff57c71b66dee007ef16121 236 SUPERFAMILY SSF51695 3 234 4.19E-67 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 K04M3_36860 4c018011806c4052368a6396642eafc4 351 Gene3D G3DSA:1.20.1530.20 3 342 4.8E-23 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily K04M3_36860 4c018011806c4052368a6396642eafc4 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 5.4E-138 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 K04M3_36860 4c018011806c4052368a6396642eafc4 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 1.3E-61 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 K04M3_36860 4c018011806c4052368a6396642eafc4 351 PIRSF PIRSF005508 1 351 9.1E-136 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 K04M3_47480 65ae335b3959d41ff9d3eede748832e9 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_47480 65ae335b3959d41ff9d3eede748832e9 147 SUPERFAMILY SSF55804 1 146 6.41E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_47480 65ae335b3959d41ff9d3eede748832e9 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 5.8E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain K04M3_47480 65ae335b3959d41ff9d3eede748832e9 147 Gene3D G3DSA:3.40.930.10 1 147 1.7E-56 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 K04M3_33820 99154c4b499267741807d86032f5696b 374 PIRSF PIRSF037238 1 373 1.2E-145 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase K04M3_33820 99154c4b499267741807d86032f5696b 374 Gene3D G3DSA:3.30.70.360 177 286 1.4E-101 T 12-10-2018 K04M3_33820 99154c4b499267741807d86032f5696b 374 SUPERFAMILY SSF55031 177 282 2.75E-24 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain K04M3_33820 99154c4b499267741807d86032f5696b 374 SUPERFAMILY SSF53187 2 373 6.86E-40 T 12-10-2018 K04M3_33820 99154c4b499267741807d86032f5696b 374 Pfam PF07687 Peptidase dimerisation domain 175 274 6.4E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain K04M3_33820 99154c4b499267741807d86032f5696b 374 Gene3D G3DSA:3.40.630.10 11 361 1.4E-101 T 12-10-2018 K04M3_33820 99154c4b499267741807d86032f5696b 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 2.5E-22 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 K04M3_27530 d0dd0ca7e05987d7dd4bb06794e82b78 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_27530 d0dd0ca7e05987d7dd4bb06794e82b78 478 Gene3D G3DSA:3.40.605.10 17 467 8.7E-165 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_27530 d0dd0ca7e05987d7dd4bb06794e82b78 478 Pfam PF00171 Aldehyde dehydrogenase family 20 471 9.6E-156 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_27530 d0dd0ca7e05987d7dd4bb06794e82b78 478 Gene3D G3DSA:3.40.309.10 257 444 8.7E-165 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_27530 d0dd0ca7e05987d7dd4bb06794e82b78 478 SUPERFAMILY SSF53720 17 475 2.23E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_27530 d0dd0ca7e05987d7dd4bb06794e82b78 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.1E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 SUPERFAMILY SSF64518 1 376 5.62E-96 T 12-10-2018 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:1.10.8.410 328 376 3.0E-20 T 12-10-2018 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:1.20.1330.10 44 327 1.0E-76 T 12-10-2018 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.3E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_22980 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:3.30.70.2120 174 275 1.0E-76 T 12-10-2018 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.1E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 SUPERFAMILY SSF64518 1 376 5.62E-96 T 12-10-2018 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:1.10.8.410 328 376 3.0E-20 T 12-10-2018 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:1.20.1330.10 44 327 1.0E-76 T 12-10-2018 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.3E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07800 2172cdf80385e7bcfd1944576bcda8fb 377 Gene3D G3DSA:3.30.70.2120 174 275 1.0E-76 T 12-10-2018 K04M3_20320 0b8710a82320c38c03c00fc487556c36 98 Gene3D G3DSA:3.30.70.1060 1 98 1.5E-38 T 12-10-2018 K04M3_20320 0b8710a82320c38c03c00fc487556c36 98 Pfam PF03795 YCII-related domain 1 95 2.1E-29 T 12-10-2018 IPR005545 YCII-related K04M3_20320 0b8710a82320c38c03c00fc487556c36 98 SUPERFAMILY SSF54909 1 98 6.08E-33 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 174 30.75 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 SUPERFAMILY SSF103088 57 173 1.23E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 PRINTS PR01021 OMPA domain signature 119 135 5.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 PRINTS PR01021 OMPA domain signature 74 96 5.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 PRINTS PR01021 OMPA domain signature 104 119 5.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 2.0E-44 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 Pfam PF00691 OmpA family 73 168 5.3E-23 T 12-10-2018 IPR006665 OmpA-like domain K04M3_10480 72a6f929e2f347f6d4f1ccace46ee364 174 Gene3D G3DSA:3.30.1330.60 47 174 1.2E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Gene3D G3DSA:3.30.450.20 616 747 7.0E-12 T 12-10-2018 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Gene3D G3DSA:1.20.1730.10 34 513 2.2E-8 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Pfam PF12860 PAS fold 634 748 3.9E-44 T 12-10-2018 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 3.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 3.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 3.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 3.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SUPERFAMILY SSF55874 843 1002 5.5E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Gene3D G3DSA:3.40.50.2300 1023 1143 5.8E-17 T 12-10-2018 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Gene3D G3DSA:1.10.287.130 748 851 4.9E-14 T 12-10-2018 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SUPERFAMILY SSF47384 773 854 1.12E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SUPERFAMILY SSF52172 1025 1142 1.57E-19 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 1.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SMART SM00388 788 853 5.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Gene3D G3DSA:3.30.565.10 852 1007 1.2E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SMART SM00448 1026 1139 1.6E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SUPERFAMILY SSF55785 626 741 2.3E-9 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 SMART SM00387 897 1006 1.9E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 5.9E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_30150 4a599168e4649112c4f714282e6ac5c1 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 5.8E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 8.1E-35 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 8.6E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 PIRSF PIRSF016578 138 389 7.6E-10 T 12-10-2018 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 PIRSF PIRSF016578 8 112 0.0034 T 12-10-2018 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 Gene3D G3DSA:1.20.140.10 242 389 1.5E-47 T 12-10-2018 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 Gene3D G3DSA:1.10.540.10 2 127 2.0E-43 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 Gene3D G3DSA:2.40.110.10 128 241 1.7E-46 T 12-10-2018 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 SUPERFAMILY SSF56645 6 249 1.44E-84 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 K04M3_43810 dd4cf1f9248fb54b84bc3f346c219d71 389 SUPERFAMILY SSF47203 234 387 3.54E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 Pfam PF01769 Divalent cation transporter 319 440 4.4E-24 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 SUPERFAMILY SSF54631 139 272 5.61E-13 T 12-10-2018 K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 SUPERFAMILY SSF158791 32 133 2.22E-14 T 12-10-2018 K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 Gene3D G3DSA:3.10.580.10 133 258 9.0E-33 T 12-10-2018 K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 SMART SM00924 34 137 4.8E-13 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 Pfam PF03448 MgtE intracellular N domain 35 135 1.4E-14 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 Gene3D G3DSA:1.10.357.20 274 447 1.2E-47 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain K04M3_45560 f27c52d4a2b82d94fd3d5595191d3a7d 448 SUPERFAMILY SSF161093 276 446 1.31E-47 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 K04M3_46220 483af8da37b40b6e9d6812121bd06a95 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_46220 483af8da37b40b6e9d6812121bd06a95 506 Pfam PF00171 Aldehyde dehydrogenase family 38 493 2.8E-158 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_46220 483af8da37b40b6e9d6812121bd06a95 506 Gene3D G3DSA:3.40.309.10 278 467 1.5E-170 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_46220 483af8da37b40b6e9d6812121bd06a95 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_46220 483af8da37b40b6e9d6812121bd06a95 506 SUPERFAMILY SSF53720 26 499 4.19E-162 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_46220 483af8da37b40b6e9d6812121bd06a95 506 Gene3D G3DSA:3.40.605.10 38 489 1.5E-170 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_10380 f801df2fde194716fc56801107b4c264 355 SUPERFAMILY SSF46785 283 353 2.31E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_10380 f801df2fde194716fc56801107b4c264 355 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 355 180.62 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 K04M3_10380 f801df2fde194716fc56801107b4c264 355 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 279 352 2.1E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 K04M3_10380 f801df2fde194716fc56801107b4c264 355 Gene3D G3DSA:3.40.50.300 46 207 2.9E-40 T 12-10-2018 K04M3_10380 f801df2fde194716fc56801107b4c264 355 SMART SM00382 77 210 2.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_10380 f801df2fde194716fc56801107b4c264 355 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 49 352 1.2E-146 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 K04M3_10380 f801df2fde194716fc56801107b4c264 355 SUPERFAMILY SSF52540 46 277 1.84E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10380 f801df2fde194716fc56801107b4c264 355 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 37 261 2.0E-116 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 K04M3_10380 f801df2fde194716fc56801107b4c264 355 Gene3D G3DSA:1.10.10.10 283 355 4.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10380 f801df2fde194716fc56801107b4c264 355 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 276 353 1.0E-38 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 K04M3_10380 f801df2fde194716fc56801107b4c264 355 Gene3D G3DSA:1.10.8.60 208 281 1.3E-30 T 12-10-2018 K04M3_02150 a866cd33d928dcff4c66a21cb7a5068b 351 Gene3D G3DSA:3.40.50.2000 3 161 2.3E-10 T 12-10-2018 K04M3_02150 a866cd33d928dcff4c66a21cb7a5068b 351 Gene3D G3DSA:3.40.50.2000 162 345 3.4E-13 T 12-10-2018 K04M3_02150 a866cd33d928dcff4c66a21cb7a5068b 351 SUPERFAMILY SSF53756 7 327 1.38E-22 T 12-10-2018 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 SUPERFAMILY SSF52980 844 1152 4.24E-75 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Gene3D G3DSA:1.10.10.160 79 192 8.0E-124 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Gene3D G3DSA:1.10.486.10 463 675 2.4E-187 T 12-10-2018 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 PIRSF PIRSF000980 1 1166 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Gene3D G3DSA:3.40.50.300 345 817 2.4E-187 T 12-10-2018 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1128 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 SUPERFAMILY SSF52540 373 821 7.26E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1160 20.69 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 816 1.3E-296 T 12-10-2018 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Gene3D G3DSA:1.10.10.990 884 962 1.4E-21 T 12-10-2018 K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 SUPERFAMILY SSF52540 2 357 3.98E-120 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24940 2e2c609d122f583fd8df991727b36022 1169 Gene3D G3DSA:3.40.50.10930 4 327 8.0E-124 T 12-10-2018 K04M3_32670 d51d020ee94bc38750f9909292173106 270 SUPERFAMILY SSF51215 30 130 3.92E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like K04M3_32670 d51d020ee94bc38750f9909292173106 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 5.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_32670 d51d020ee94bc38750f9909292173106 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 5.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_32670 d51d020ee94bc38750f9909292173106 270 Gene3D G3DSA:1.10.10.60 217 269 5.9E-15 T 12-10-2018 K04M3_32670 d51d020ee94bc38750f9909292173106 270 SUPERFAMILY SSF46689 170 216 1.79E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_32670 d51d020ee94bc38750f9909292173106 270 SMART SM00342 183 266 1.5E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_32670 d51d020ee94bc38750f9909292173106 270 SUPERFAMILY SSF46689 220 268 1.61E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_32670 d51d020ee94bc38750f9909292173106 270 Pfam PF12833 Helix-turn-helix domain 189 267 2.5E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_32670 d51d020ee94bc38750f9909292173106 270 Gene3D G3DSA:1.10.10.60 169 216 2.7E-10 T 12-10-2018 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 1.5E-76 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 SMART SM01185 69 123 3.5E-25 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Gene3D G3DSA:2.40.50.140 130 188 5.5E-27 T 12-10-2018 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Gene3D G3DSA:2.40.50.140 66 129 8.1E-29 T 12-10-2018 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 SUPERFAMILY SSF50249 70 128 3.17E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.1E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 SMART SM00841 131 186 1.0E-30 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 SUPERFAMILY SSF50249 130 187 7.02E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 PIRSF PIRSF005901 2 188 4.1E-63 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.868 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 K04M3_29900 288334448acdd28671fb4fb445d7ac25 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.5E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 K04M3_16310 0b32a008157f0da1e98fe3bd3f34db05 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.408 T 12-10-2018 IPR009809 Cell division protein ZapC K04M3_16310 0b32a008157f0da1e98fe3bd3f34db05 180 PIRSF PIRSF010252 1 178 2.5E-72 T 12-10-2018 IPR009809 Cell division protein ZapC K04M3_16310 0b32a008157f0da1e98fe3bd3f34db05 180 Pfam PF07126 Cell-division protein ZapC 1 168 2.2E-66 T 12-10-2018 IPR009809 Cell division protein ZapC K04M3_13410 90beef87ef310fa339dda64f6bceeea7 536 Gene3D G3DSA:3.40.190.10 39 517 4.1E-169 T 12-10-2018 K04M3_13410 90beef87ef310fa339dda64f6bceeea7 536 Gene3D G3DSA:3.90.76.10 68 191 4.1E-169 T 12-10-2018 K04M3_13410 90beef87ef310fa339dda64f6bceeea7 536 PIRSF PIRSF002741 1 536 5.6E-103 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_13410 90beef87ef310fa339dda64f6bceeea7 536 Gene3D G3DSA:3.10.105.10 294 505 4.1E-169 T 12-10-2018 K04M3_13410 90beef87ef310fa339dda64f6bceeea7 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 1.3E-87 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_13410 90beef87ef310fa339dda64f6bceeea7 536 SUPERFAMILY SSF53850 35 529 1.68E-129 T 12-10-2018 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 Pfam PF02863 Arginine repressor, C-terminal domain 84 149 3.9E-21 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 Hamap MF_00173 Arginine repressor [argR]. 1 157 58.408 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 Pfam PF01316 Arginine repressor, DNA binding domain 8 76 8.9E-24 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 Gene3D G3DSA:3.30.1360.40 77 158 1.9E-33 T 12-10-2018 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 Gene3D G3DSA:1.10.10.10 3 76 8.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 PRINTS PR01467 Bacterial arginine repressor signature 27 40 7.3E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 PRINTS PR01467 Bacterial arginine repressor signature 123 138 7.3E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 PRINTS PR01467 Bacterial arginine repressor signature 92 105 7.3E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 PRINTS PR01467 Bacterial arginine repressor signature 44 59 7.3E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 SUPERFAMILY SSF55252 84 153 6.41E-19 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 SUPERFAMILY SSF46785 5 79 3.45E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 91 148 4.0E-20 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 K04M3_03280 fbbdeafc628d072d5d965d56c8569922 158 TIGRFAM TIGR01529 argR_whole: arginine repressor 12 153 9.1E-44 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 K04M3_36850 5f4c18f039976000f22ea73096af441a 259 SMART SM00342 172 254 8.5E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_36850 5f4c18f039976000f22ea73096af441a 259 SUPERFAMILY SSF46689 207 256 1.08E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_36850 5f4c18f039976000f22ea73096af441a 259 Pfam PF12833 Helix-turn-helix domain 179 255 9.3E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_36850 5f4c18f039976000f22ea73096af441a 259 Gene3D G3DSA:1.10.10.60 151 258 3.1E-23 T 12-10-2018 K04M3_36850 5f4c18f039976000f22ea73096af441a 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_36850 5f4c18f039976000f22ea73096af441a 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_13280 9a641df5a7e5837db2801b6ee9b1fe53 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 1.8E-34 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_13280 9a641df5a7e5837db2801b6ee9b1fe53 357 Gene3D G3DSA:3.40.190.10 30 335 1.3E-117 T 12-10-2018 K04M3_13280 9a641df5a7e5837db2801b6ee9b1fe53 357 Gene3D G3DSA:3.40.190.10 137 341 1.3E-117 T 12-10-2018 K04M3_13280 9a641df5a7e5837db2801b6ee9b1fe53 357 SUPERFAMILY SSF53850 25 355 1.71E-59 T 12-10-2018 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 Gene3D G3DSA:3.40.190.10 88 292 5.6E-47 T 12-10-2018 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 Gene3D G3DSA:1.10.10.10 1 86 3.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 SUPERFAMILY SSF53850 88 294 6.88E-35 T 12-10-2018 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 SUPERFAMILY SSF46785 3 80 1.2E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 Pfam PF03466 LysR substrate binding domain 95 295 4.4E-20 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 Gene3D G3DSA:3.40.190.10 169 267 5.6E-47 T 12-10-2018 K04M3_43060 b5bfd09d5096cab5d11fa1bd06728ba1 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.8E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25240 e604940741db2b03e1d1da418a8db119 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.2E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25240 e604940741db2b03e1d1da418a8db119 305 Gene3D G3DSA:3.40.190.10 100 297 1.5E-45 T 12-10-2018 K04M3_25240 e604940741db2b03e1d1da418a8db119 305 Gene3D G3DSA:1.10.10.10 3 91 1.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_25240 e604940741db2b03e1d1da418a8db119 305 Pfam PF03466 LysR substrate binding domain 100 289 7.1E-25 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_25240 e604940741db2b03e1d1da418a8db119 305 Gene3D G3DSA:3.40.190.10 175 273 1.5E-45 T 12-10-2018 K04M3_25240 e604940741db2b03e1d1da418a8db119 305 SUPERFAMILY SSF46785 7 85 1.02E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_25240 e604940741db2b03e1d1da418a8db119 305 SUPERFAMILY SSF53850 94 299 8.87E-37 T 12-10-2018 K04M3_05710 84903dc593931e26c7077aa0666b2454 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site K04M3_05710 84903dc593931e26c7077aa0666b2454 404 PIRSF PIRSF005572 2 384 2.5E-137 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 K04M3_05710 84903dc593931e26c7077aa0666b2454 404 SUPERFAMILY SSF53383 5 391 7.18E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_05710 84903dc593931e26c7077aa0666b2454 404 Gene3D G3DSA:3.90.1150.10 5 375 1.9E-168 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_05710 84903dc593931e26c7077aa0666b2454 404 Gene3D G3DSA:3.40.640.10 16 262 1.9E-168 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_05710 84903dc593931e26c7077aa0666b2454 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-89 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_05710 84903dc593931e26c7077aa0666b2454 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.558 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 K04M3_05710 84903dc593931e26c7077aa0666b2454 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.3E-229 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 K04M3_05540 3a16e94666224faa3901e0f614661fd4 249 SUPERFAMILY SSF110395 6 249 1.57E-72 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 K04M3_05540 3a16e94666224faa3901e0f614661fd4 249 Gene3D G3DSA:3.20.20.380 5 249 3.0E-85 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 K04M3_05540 3a16e94666224faa3901e0f614661fd4 249 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 5 209 30.112 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 K04M3_05540 3a16e94666224faa3901e0f614661fd4 249 Pfam PF03932 CutC family 6 207 3.6E-80 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 K04M3_38610 49e944e35237f0fa68896f10705614fc 106 SUPERFAMILY SSF143410 1 102 5.1E-33 T 12-10-2018 IPR023389 DOPA-like superfamily K04M3_38610 49e944e35237f0fa68896f10705614fc 106 PIRSF PIRSF028139 1 106 3.8E-40 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase K04M3_38610 49e944e35237f0fa68896f10705614fc 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 6.7E-27 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase K04M3_38610 49e944e35237f0fa68896f10705614fc 106 Gene3D G3DSA:3.30.70.1240 1 104 4.4E-29 T 12-10-2018 IPR023389 DOPA-like superfamily K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 Pfam PF00089 Trypsin 86 113 2.9E-4 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 Pfam PF00089 Trypsin 194 353 1.7E-5 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 Gene3D G3DSA:2.40.10.10 67 135 8.4E-6 T 12-10-2018 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 Gene3D G3DSA:2.40.10.10 200 241 3.7E-6 T 12-10-2018 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 Gene3D G3DSA:2.40.10.10 242 353 3.7E-6 T 12-10-2018 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 648 666 0.0034 T 12-10-2018 IPR020008 GlyGly-CTERM domain K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 SUPERFAMILY SSF50494 81 353 5.27E-15 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 96 111 2.0E-5 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 208 222 2.0E-5 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_52270 ea3f82f9275bda93a1d78fa123f92ce5 669 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 321 333 2.0E-5 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_26370 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26370 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.052 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26370 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26370 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_26370 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26370 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_17090 d4694b910035e7771b2ca9c60a0a101b 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 22 104 6.0E-15 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 K04M3_17090 d4694b910035e7771b2ca9c60a0a101b 132 SUPERFAMILY SSF51316 1 119 3.98E-32 T 12-10-2018 IPR011057 Mss4-like superfamily K04M3_17090 d4694b910035e7771b2ca9c60a0a101b 132 Gene3D G3DSA:2.170.150.70 1 111 2.6E-13 T 12-10-2018 K04M3_17420 258158696d275c0cf08727bb0a2341ba 387 Gene3D G3DSA:1.10.3290.10 74 387 5.3E-118 T 12-10-2018 IPR036597 Fido-like domain superfamily K04M3_17420 258158696d275c0cf08727bb0a2341ba 387 Pfam PF02661 Fic/DOC family 278 362 2.6E-5 T 12-10-2018 IPR003812 Fido domain K04M3_17420 258158696d275c0cf08727bb0a2341ba 387 SUPERFAMILY SSF140931 263 370 8.76E-7 T 12-10-2018 IPR036597 Fido-like domain superfamily K04M3_07670 68f96dff178ff79656a033031893f5a1 275 SUPERFAMILY SSF53335 76 269 1.05E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_07670 68f96dff178ff79656a033031893f5a1 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.1E-68 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal K04M3_07670 68f96dff178ff79656a033031893f5a1 275 SMART SM00138 8 272 1.6E-131 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 Gene3D G3DSA:1.10.155.10 1 74 8.1E-11 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily K04M3_07670 68f96dff178ff79656a033031893f5a1 275 Gene3D G3DSA:3.40.50.150 75 274 2.6E-60 T 12-10-2018 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 12-10-2018 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 K04M3_07670 68f96dff178ff79656a033031893f5a1 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal K04M3_44420 8328353bc6b5c7ddc338a2b8ffe348d2 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 3.6E-38 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein K04M3_44420 8328353bc6b5c7ddc338a2b8ffe348d2 136 SUPERFAMILY SSF160719 28 131 1.96E-20 T 12-10-2018 K04M3_44420 8328353bc6b5c7ddc338a2b8ffe348d2 136 Gene3D G3DSA:3.10.450.40 6 117 4.1E-11 T 12-10-2018 K04M3_44420 8328353bc6b5c7ddc338a2b8ffe348d2 136 Pfam PF04965 Gene 25-like lysozyme 28 115 6.8E-18 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD K04M3_16170 c17d8d5bd59f433abce869fb759e5d19 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 3.1E-230 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 K04M3_16170 c17d8d5bd59f433abce869fb759e5d19 475 SUPERFAMILY SSF81442 11 465 3.01E-121 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_16170 c17d8d5bd59f433abce869fb759e5d19 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_16170 c17d8d5bd59f433abce869fb759e5d19 475 Gene3D G3DSA:1.20.210.10 4 471 6.1E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_16170 c17d8d5bd59f433abce869fb759e5d19 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 2.9E-115 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:3.40.50.300 128 312 5.0E-67 T 12-10-2018 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:1.10.10.60 381 467 5.9E-26 T 12-10-2018 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.7E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SUPERFAMILY SSF52540 141 385 8.53E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SMART SM00448 4 115 3.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:1.10.8.60 313 380 1.1E-17 T 12-10-2018 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SUPERFAMILY SSF52172 2 187 2.13E-43 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SUPERFAMILY SSF46689 382 466 1.43E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 SMART SM00382 162 316 1.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.5E-237 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_01040 971d74a4707aaebf8f6ca31c0fc7f0ec 467 Gene3D G3DSA:3.40.50.2300 1 124 2.7E-40 T 12-10-2018 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 1.0E-22 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 PIRSF PIRSF000190 1 211 3.8E-80 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Gene3D G3DSA:2.30.110.10 13 211 2.5E-75 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 6.9E-89 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.466 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 SUPERFAMILY SSF50475 11 211 1.52E-63 T 12-10-2018 K04M3_32650 8e4f29db3d2cad8d5331f6f07dc8f75c 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 9.9E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_44360 062c59d29fac774ff862992389d9593f 199 SUPERFAMILY SSF56925 65 164 2.15E-5 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_05720 e68d807856b2f9c7b7030cd46418b563 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 K04M3_05720 e68d807856b2f9c7b7030cd46418b563 127 SUPERFAMILY SSF82649 1 125 6.54E-48 T 12-10-2018 K04M3_05720 e68d807856b2f9c7b7030cd46418b563 127 Gene3D G3DSA:3.90.1010.10 1 127 5.6E-59 T 12-10-2018 K04M3_05720 e68d807856b2f9c7b7030cd46418b563 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.7E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 K04M3_08360 0ead7f5eeb9c7d13575d0ae7d9afe691 252 Gene3D G3DSA:3.40.1390.30 97 223 2.6E-82 T 12-10-2018 K04M3_08360 0ead7f5eeb9c7d13575d0ae7d9afe691 252 Gene3D G3DSA:3.40.1390.30 14 237 2.6E-82 T 12-10-2018 K04M3_08360 0ead7f5eeb9c7d13575d0ae7d9afe691 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 4.7E-59 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 K04M3_08360 0ead7f5eeb9c7d13575d0ae7d9afe691 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 8.1E-70 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 K04M3_08360 0ead7f5eeb9c7d13575d0ae7d9afe691 252 SUPERFAMILY SSF102705 1 251 1.83E-82 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 42 449 1.2E-88 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 448 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 428 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 1.6E-29 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 Gene3D G3DSA:1.10.287.470 228 301 2.1E-12 T 12-10-2018 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 Gene3D G3DSA:2.40.50.100 302 336 2.1E-12 T 12-10-2018 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 Pfam PF13437 HlyD family secretion protein 301 405 3.4E-14 T 12-10-2018 K04M3_37470 0736641561330e393bda4b076ed1b1e9 449 Gene3D G3DSA:2.40.30.170 339 426 2.1E-12 T 12-10-2018 K04M3_45630 3fe6901bdc7bbd0c00f62dac359a72cd 218 SUPERFAMILY SSF55821 10 213 2.52E-80 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily K04M3_45630 3fe6901bdc7bbd0c00f62dac359a72cd 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.3E-77 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_45630 3fe6901bdc7bbd0c00f62dac359a72cd 218 Gene3D G3DSA:3.90.870.10 6 218 2.4E-86 T 12-10-2018 K04M3_45630 3fe6901bdc7bbd0c00f62dac359a72cd 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 7.4E-75 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_45630 3fe6901bdc7bbd0c00f62dac359a72cd 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 41.962 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 31.553 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 550 1.5E-8 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 2.1E-126 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 SUPERFAMILY SSF52518 9 178 1.39E-30 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Gene3D G3DSA:3.40.50.1220 215 345 2.5E-38 T 12-10-2018 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Gene3D G3DSA:3.40.50.970 364 570 1.5E-48 T 12-10-2018 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 SUPERFAMILY SSF52518 386 563 1.11E-27 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 PIRSF PIRSF004983 3 572 7.6E-181 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Gene3D G3DSA:3.40.50.970 4 198 2.1E-55 T 12-10-2018 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 7.9E-30 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 K04M3_09240 10df94e71ea9b22ec7938cc2322dfe08 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 397 1.2E-37 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Gene3D G3DSA:1.10.287.130 472 546 1.9E-22 T 12-10-2018 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Gene3D G3DSA:2.20.20.100 207 270 2.0E-33 T 12-10-2018 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 482 546 2.7E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SUPERFAMILY SSF47384 469 547 3.53E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SUPERFAMILY SSF55785 347 459 1.74E-5 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Gene3D G3DSA:3.30.450.220 50 206 3.3E-63 T 12-10-2018 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SUPERFAMILY SSF55874 535 708 7.47E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 8 360 2.0E-178 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Pfam PF09308 LuxQ, periplasmic 40 277 2.0E-96 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SMART SM00388 481 546 4.3E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Pfam PF00072 Response regulator receiver domain 736 845 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SUPERFAMILY SSF52172 733 853 2.7E-29 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Gene3D G3DSA:3.40.50.2300 724 854 1.7E-31 T 12-10-2018 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Gene3D G3DSA:3.30.565.10 547 714 4.0E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SMART SM00448 734 846 1.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Gene3D G3DSA:3.30.450.20 343 471 5.1E-11 T 12-10-2018 K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SMART SM00387 593 710 1.4E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 708 2.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45300 b6d9115bd79e81ec15efb56ead40c8c4 858 SUPERFAMILY SSF103190 51 269 1.41E-68 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 SUPERFAMILY SSF53720 5 454 1.31E-84 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 SUPERFAMILY SSF56796 452 863 1.24E-114 T 12-10-2018 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 7.4E-112 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.9E-25 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.309.10 217 398 7.8E-171 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 PIRSF PIRSF000111 1 865 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:1.20.1090.10 643 864 1.4E-59 T 12-10-2018 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.605.10 15 216 7.8E-171 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_21780 e5e3ebfb4672161f8ba029d92092bd35 900 Gene3D G3DSA:3.40.50.1970 456 642 9.9E-58 T 12-10-2018 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 Gene3D G3DSA:3.40.190.10 159 262 2.6E-34 T 12-10-2018 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 Gene3D G3DSA:1.10.10.10 5 94 6.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 SUPERFAMILY SSF46785 2 82 5.75E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 SUPERFAMILY SSF53850 88 293 3.08E-23 T 12-10-2018 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 Pfam PF03466 LysR substrate binding domain 87 293 1.5E-20 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 Gene3D G3DSA:3.40.190.10 100 289 2.6E-34 T 12-10-2018 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46770 81cd54444f4ae1abe0c749bb47836cef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_22950 cc86485636285151eed323bb0bb8086e 664 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 429 653 4.7E-55 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 K04M3_22950 cc86485636285151eed323bb0bb8086e 664 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 5.6E-21 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 K04M3_22950 cc86485636285151eed323bb0bb8086e 664 Pfam PF07196 Flagellin hook IN motif 125 177 2.1E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_25820 c5c617c2dcbf5a351b3f082b23f81b04 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.764 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 K04M3_25820 c5c617c2dcbf5a351b3f082b23f81b04 113 Gene3D G3DSA:2.60.300.12 7 113 1.6E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 K04M3_25820 c5c617c2dcbf5a351b3f082b23f81b04 113 SUPERFAMILY SSF89360 7 99 3.53E-29 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 K04M3_25820 c5c617c2dcbf5a351b3f082b23f81b04 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.5E-17 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 K04M3_25820 c5c617c2dcbf5a351b3f082b23f81b04 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 2.7E-36 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 K04M3_25820 c5c617c2dcbf5a351b3f082b23f81b04 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 K04M3_23000 7eb6ca4d5eedc7d859fda620df03a1ab 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 3.5E-81 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 K04M3_23000 7eb6ca4d5eedc7d859fda620df03a1ab 300 SUPERFAMILY SSF54909 1 297 2.5E-92 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_23000 7eb6ca4d5eedc7d859fda620df03a1ab 300 Pfam PF04261 Dyp-type peroxidase family 5 293 6.1E-87 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 K04M3_03910 ccf3d0f9a92b4c263616892d4753618c 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 1.4E-65 T 12-10-2018 IPR002727 Protein of unknown function DUF47 K04M3_03910 ccf3d0f9a92b4c263616892d4753618c 226 SUPERFAMILY SSF109755 29 216 8.2E-15 T 12-10-2018 K04M3_03910 ccf3d0f9a92b4c263616892d4753618c 226 Pfam PF01865 Protein of unknown function DUF47 7 223 6.3E-64 T 12-10-2018 IPR018445 Putative phosphate transport regulator K04M3_03910 ccf3d0f9a92b4c263616892d4753618c 226 Gene3D G3DSA:1.20.58.220 1 225 2.6E-64 T 12-10-2018 IPR038078 PhoU-like domain superfamily K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 Pfam PF17200 Single Cache domain 2 36 185 1.5E-33 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 Gene3D G3DSA:1.10.287.950 218 540 2.7E-65 T 12-10-2018 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 9.2E-27 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 9.2E-27 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 9.2E-27 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 9.2E-27 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 SMART SM00283 277 538 7.7E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 Gene3D G3DSA:3.30.450.20 34 182 7.3E-30 T 12-10-2018 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 SUPERFAMILY SSF58104 244 539 9.16E-70 T 12-10-2018 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 502 1.4E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_27470 8e7ef42e29dc8ef762ed4f6973b78839 541 SMART SM01049 30 124 7.0E-19 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 SMART SM00411 3 92 1.6E-40 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 Gene3D G3DSA:4.10.520.10 1 97 7.5E-38 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.3E-50 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 SUPERFAMILY SSF47729 3 95 3.68E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_12500 10edee3ba40e44b663adf2397f97c8c5 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.499 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 K04M3_10570 45e1857fa710a7cfb14ed3eac2cf24e6 149 Pfam PF06610 L-alanine exporter 8 142 8.8E-69 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 K04M3_10570 45e1857fa710a7cfb14ed3eac2cf24e6 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-65 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 K04M3_10570 45e1857fa710a7cfb14ed3eac2cf24e6 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.767 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 2.0E-37 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 SUPERFAMILY SSF55957 374 466 6.28E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Gene3D G3DSA:3.40.120.10 1 170 1.8E-47 T 12-10-2018 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.7E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 SUPERFAMILY SSF53738 250 379 2.59E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 6.3E-26 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 2.8E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Gene3D G3DSA:3.40.120.10 171 365 6.6E-60 T 12-10-2018 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Gene3D G3DSA:3.30.310.50 370 469 4.3E-16 T 12-10-2018 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 SUPERFAMILY SSF53738 2 187 2.94E-40 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25960 2692b06f74be8bf08913fa62729880b2 470 Gene3D G3DSA:3.40.120.10 263 369 6.6E-60 T 12-10-2018 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 TIGRFAM TIGR01388 rnd: ribonuclease D 21 385 6.8E-148 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 SUPERFAMILY SSF47819 209 317 3.49E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 Pfam PF01612 3'-5' exonuclease 19 186 9.6E-41 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 Gene3D G3DSA:1.10.150.80 310 388 9.6E-28 T 12-10-2018 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 Hamap MF_01899 Ribonuclease D [rnd]. 19 388 43.853 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 SUPERFAMILY SSF47819 312 387 1.44E-21 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 SUPERFAMILY SSF53098 16 225 2.02E-70 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 Gene3D G3DSA:3.30.420.10 17 210 9.7E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 Gene3D G3DSA:1.10.150.80 212 309 1.5E-16 T 12-10-2018 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 SMART SM00474 19 187 3.8E-44 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 K04M3_08660 677a037ccf26c5a31d8e66ee5cbf0a0e 388 Pfam PF00570 HRDC domain 229 295 2.0E-7 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 K04M3_13430 23ac256c8a46824f75fb2345da978050 357 PIRSF PIRSF009283 1 355 9.4E-125 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 K04M3_13430 23ac256c8a46824f75fb2345da978050 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 4.2E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_13430 23ac256c8a46824f75fb2345da978050 357 SUPERFAMILY SSF54593 5 341 8.31E-79 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_13430 23ac256c8a46824f75fb2345da978050 357 Gene3D G3DSA:3.10.180.10 3 154 6.8E-46 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_13430 23ac256c8a46824f75fb2345da978050 357 Gene3D G3DSA:3.10.180.10 158 355 3.3E-70 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_13430 23ac256c8a46824f75fb2345da978050 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 2.6E-131 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 K04M3_13430 23ac256c8a46824f75fb2345da978050 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 5.9E-56 T 12-10-2018 K04M3_37140 c468c54adb26dc46911a28ffb7d91888 285 SUPERFAMILY SSF103481 33 131 4.58E-9 T 12-10-2018 K04M3_37140 c468c54adb26dc46911a28ffb7d91888 285 Pfam PF00892 EamA-like transporter family 140 271 3.5E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_37140 c468c54adb26dc46911a28ffb7d91888 285 Pfam PF00892 EamA-like transporter family 1 131 7.8E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_37140 c468c54adb26dc46911a28ffb7d91888 285 SUPERFAMILY SSF103481 182 274 5.89E-9 T 12-10-2018 K04M3_25980 64a0e91f744241db129c03b13bffad16 541 SUPERFAMILY SSF161098 9 258 7.59E-44 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25980 64a0e91f744241db129c03b13bffad16 541 Gene3D G3DSA:1.10.3720.10 285 540 3.3E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25980 64a0e91f744241db129c03b13bffad16 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 533 4.0E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_25980 64a0e91f744241db129c03b13bffad16 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 7.9E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_25980 64a0e91f744241db129c03b13bffad16 541 SUPERFAMILY SSF161098 282 535 3.05E-38 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25980 64a0e91f744241db129c03b13bffad16 541 Gene3D G3DSA:1.10.3720.10 10 267 1.8E-53 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_21640 fe887bc68fe818041be93c201295c94b 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 8.7E-88 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 K04M3_21640 fe887bc68fe818041be93c201295c94b 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.969 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 K04M3_21640 fe887bc68fe818041be93c201295c94b 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 6.5E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_21640 fe887bc68fe818041be93c201295c94b 230 PIRSF PIRSF006102 1 220 8.7E-78 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_19240 25b8ed9c73c5e5ea8b35c47540b3c0c8 158 SUPERFAMILY SSF55729 1 152 1.36E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_19240 25b8ed9c73c5e5ea8b35c47540b3c0c8 158 Gene3D G3DSA:3.40.630.30 1 156 5.9E-21 T 12-10-2018 K04M3_19240 25b8ed9c73c5e5ea8b35c47540b3c0c8 158 Pfam PF00583 Acetyltransferase (GNAT) family 44 137 2.0E-11 T 12-10-2018 IPR000182 GNAT domain K04M3_14250 118039b83ac7cf2dafd92a2ab4b59153 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 306 2.5E-85 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_14250 118039b83ac7cf2dafd92a2ab4b59153 324 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 15 315 3.8E-140 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 K04M3_14250 118039b83ac7cf2dafd92a2ab4b59153 324 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 14 315 46.55 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 K04M3_14250 118039b83ac7cf2dafd92a2ab4b59153 324 PIRSF PIRSF026649 12 315 1.1E-87 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 Gene3D G3DSA:1.10.10.10 1 91 3.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 SUPERFAMILY SSF53850 88 255 7.6E-20 T 12-10-2018 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 Gene3D G3DSA:3.40.190.10 159 249 1.8E-40 T 12-10-2018 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 SUPERFAMILY SSF46785 1 87 4.17E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 Gene3D G3DSA:3.40.190.10 93 254 1.8E-40 T 12-10-2018 K04M3_38510 f7c0deb180f5829fc02dbbb600db2d52 276 Pfam PF03466 LysR substrate binding domain 88 238 7.4E-20 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 Pfam PF00108 Thiolase, N-terminal domain 6 260 2.5E-85 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 SUPERFAMILY SSF53901 270 390 3.6E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 Gene3D G3DSA:3.40.47.10 127 389 2.5E-143 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 Gene3D G3DSA:3.40.47.10 7 275 2.5E-143 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 1.9E-44 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 2.9E-131 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 PIRSF PIRSF000429 1 392 2.7E-113 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 SUPERFAMILY SSF53901 5 268 7.31E-76 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_43790 ba5e628e33ca4c9ec367d3640521b951 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 K04M3_43250 c6b1f2b3dfbec169b2822776b9b67ac6 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 1.2E-22 T 12-10-2018 K04M3_43250 c6b1f2b3dfbec169b2822776b9b67ac6 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.6E-241 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK K04M3_43250 c6b1f2b3dfbec169b2822776b9b67ac6 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 4.0E-113 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal K04M3_43250 c6b1f2b3dfbec169b2822776b9b67ac6 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 12-10-2018 IPR010019 Integral membrane protein, YccS K04M3_19360 3372010696093c483ed97e756bfb9c93 195 Gene3D G3DSA:1.10.3210.10 1 195 8.7E-52 T 12-10-2018 K04M3_19360 3372010696093c483ed97e756bfb9c93 195 SUPERFAMILY SSF109604 4 182 5.1E-43 T 12-10-2018 K04M3_19360 3372010696093c483ed97e756bfb9c93 195 Pfam PF13023 HD domain 15 172 8.7E-52 T 12-10-2018 IPR006674 HD domain K04M3_29030 139fc8ebd2d9a8deb9420e8b7b443345 300 SUPERFAMILY SSF51730 22 294 5.69E-95 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like K04M3_29030 139fc8ebd2d9a8deb9420e8b7b443345 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 3.5E-100 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 K04M3_29030 139fc8ebd2d9a8deb9420e8b7b443345 300 Gene3D G3DSA:3.20.20.220 1 298 1.4E-111 T 12-10-2018 K04M3_29030 139fc8ebd2d9a8deb9420e8b7b443345 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.0E-102 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 K04M3_48900 538ec333c25b019ddd73f4ab106b9ab2 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 1.2E-30 T 12-10-2018 K04M3_48900 538ec333c25b019ddd73f4ab106b9ab2 206 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 195 4.7E-33 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like K04M3_48900 538ec333c25b019ddd73f4ab106b9ab2 206 Gene3D G3DSA:1.20.1440.100 21 93 8.6E-31 T 12-10-2018 K04M3_48900 538ec333c25b019ddd73f4ab106b9ab2 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 5.8E-25 T 12-10-2018 K04M3_48900 538ec333c25b019ddd73f4ab106b9ab2 206 Gene3D G3DSA:3.40.50.1000 9 196 8.6E-31 T 12-10-2018 IPR023214 HAD superfamily K04M3_48900 538ec333c25b019ddd73f4ab106b9ab2 206 SUPERFAMILY SSF56784 7 195 6.2E-22 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_27790 4893a0aa29763be91b2777b02e6b8100 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.5E-20 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane K04M3_27790 4893a0aa29763be91b2777b02e6b8100 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.6E-21 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane K04M3_31320 f378d464a2439496aa4343974e91b422 240 Gene3D G3DSA:3.40.50.10090 4 240 1.1E-68 T 12-10-2018 K04M3_31320 f378d464a2439496aa4343974e91b422 240 SUPERFAMILY SSF69618 1 240 3.27E-50 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_31320 f378d464a2439496aa4343974e91b422 240 Gene3D G3DSA:3.40.50.10090 32 161 1.1E-68 T 12-10-2018 K04M3_31320 f378d464a2439496aa4343974e91b422 240 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 236 6.4E-32 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 K04M3_15010 2124645f4f6b4e520a74ce4b3e72eb47 256 Pfam PF03741 Integral membrane protein TerC family 16 203 9.1E-43 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Gene3D G3DSA:3.40.190.10 148 268 1.7E-16 T 12-10-2018 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Pfam PF00512 His Kinase A (phospho-acceptor) domain 405 463 5.5E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 SUPERFAMILY SSF47384 391 463 8.44E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Gene3D G3DSA:1.10.287.130 404 464 1.3E-17 T 12-10-2018 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 SUPERFAMILY SSF55874 456 620 1.44E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 620 5.5E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 SMART SM00387 509 622 1.5E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 570 3.8E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 3.8E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 73 307 2.1E-35 T 12-10-2018 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Gene3D G3DSA:3.40.190.10 71 293 1.7E-16 T 12-10-2018 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 SMART SM00388 398 467 4.9E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 SUPERFAMILY SSF53850 76 303 1.21E-18 T 12-10-2018 K04M3_20690 544338169c9916f20c0e93c073a79ff0 622 Gene3D G3DSA:3.30.565.10 468 622 5.7E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_23590 d79e9d38a9f4902b75e3501db039907f 146 Pfam PF09842 Predicted membrane protein (DUF2069) 20 122 9.4E-34 T 12-10-2018 IPR018643 Protein of unknown function DUF2069, membrane K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 Gene3D G3DSA:3.30.565.10 191 343 7.0E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 126 187 8.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 Gene3D G3DSA:1.10.287.130 109 190 2.2E-13 T 12-10-2018 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 SMART SM00388 119 187 5.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 SMART SM00387 229 339 6.6E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 338 8.3E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 Gene3D G3DSA:1.20.120.620 3 108 1.3E-16 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 Pfam PF13493 Domain of unknown function (DUF4118) 12 114 6.6E-22 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 SUPERFAMILY SSF55874 177 337 3.41E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_35550 bfd175ba5a612c7345d04f0bb5a5e99a 344 SUPERFAMILY SSF47384 108 188 3.34E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 Gene3D G3DSA:1.10.287.110 1 79 1.1E-22 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 Gene3D G3DSA:1.20.1280.20 80 171 4.0E-28 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 SUPERFAMILY SSF47144 78 170 4.05E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 Pfam PF00226 DnaJ domain 2 70 1.9E-7 T 12-10-2018 IPR001623 DnaJ domain K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 SMART SM00271 1 66 8.8E-10 T 12-10-2018 IPR001623 DnaJ domain K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 3.0E-19 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 SUPERFAMILY SSF46565 1 72 4.58E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.204 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_05740 937f395bc541ae9bdfb266f07572f845 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.6E-41 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_25100 5379ca38dd450a2f1dedaa423d10716e 230 Gene3D G3DSA:3.90.1010.10 31 116 7.0E-7 T 12-10-2018 K04M3_25100 5379ca38dd450a2f1dedaa423d10716e 230 SUPERFAMILY SSF82649 56 101 4.97E-8 T 12-10-2018 K04M3_25100 5379ca38dd450a2f1dedaa423d10716e 230 Pfam PF01592 NifU-like N terminal domain 55 102 5.8E-5 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 Pfam PF12404 Peptidase 5 81 7.5E-34 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 65.974 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 PIRSF PIRSF036388 1 432 1.9E-224 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 Gene3D G3DSA:3.40.630.10 92 431 6.2E-108 T 12-10-2018 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 SUPERFAMILY SSF53187 104 428 1.98E-101 T 12-10-2018 K04M3_05780 a460f6d768d35173d442fa5b64f9f314 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 5.5E-104 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 K04M3_33150 7d80bcfe624b41fefd0f9894fa46faed 414 Gene3D G3DSA:3.40.190.10 25 371 1.2E-124 T 12-10-2018 K04M3_33150 7d80bcfe624b41fefd0f9894fa46faed 414 Gene3D G3DSA:3.40.190.10 140 396 1.2E-124 T 12-10-2018 K04M3_33150 7d80bcfe624b41fefd0f9894fa46faed 414 Pfam PF13416 Bacterial extracellular solute-binding protein 64 343 2.1E-16 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_33150 7d80bcfe624b41fefd0f9894fa46faed 414 SUPERFAMILY SSF53850 25 409 1.53E-43 T 12-10-2018 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 Pfam PF00460 Flagella basal body rod protein 5 33 6.3E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.9E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 1.9E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.9E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.9E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.9E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 SUPERFAMILY SSF64518 133 457 2.75E-26 T 12-10-2018 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 4.8E-117 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_47100 8c196dcab9957b65095121ff3a594e58 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 409 456 5.4E-7 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_20300 6f997b8dd6a2dc4932a9db76e20569af 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 6.4E-62 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 K04M3_20300 6f997b8dd6a2dc4932a9db76e20569af 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.386 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 K04M3_20300 6f997b8dd6a2dc4932a9db76e20569af 187 Pfam PF04279 Intracellular septation protein A 1 174 1.1E-66 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 K04M3_19180 d2a1fb5c0c1832571727081c6e268cc9 177 SUPERFAMILY SSF52499 2 168 4.06E-39 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_19180 d2a1fb5c0c1832571727081c6e268cc9 177 Pfam PF00857 Isochorismatase family 3 147 1.6E-32 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 K04M3_19180 d2a1fb5c0c1832571727081c6e268cc9 177 Gene3D G3DSA:3.40.50.850 1 162 2.3E-40 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 SUPERFAMILY SSF46785 8 114 7.06E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 Gene3D G3DSA:1.10.10.10 5 92 4.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 Pfam PF03466 LysR substrate binding domain 90 295 6.4E-44 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 Gene3D G3DSA:3.40.190.10 94 293 8.0E-59 T 12-10-2018 K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 SUPERFAMILY SSF53850 90 299 8.69E-47 T 12-10-2018 K04M3_08720 8a031b9b85f8344700f4ad0ee4eba3bb 314 Gene3D G3DSA:3.40.190.10 165 267 8.0E-59 T 12-10-2018 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 Pfam PF02107 Flagellar L-ring protein 46 220 7.2E-60 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.6E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_47130 4ca2cc0d4d3eeaf73e9fcb2e9dd50544 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.024 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_31940 fe68bf50bfedf8372ef32fb19a345e42 364 Gene3D G3DSA:3.10.350.10 38 85 1.8E-14 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_31940 fe68bf50bfedf8372ef32fb19a345e42 364 SMART SM00257 39 87 2.0E-4 T 12-10-2018 IPR018392 LysM domain K04M3_31940 fe68bf50bfedf8372ef32fb19a345e42 364 Pfam PF01476 LysM domain 40 85 1.2E-12 T 12-10-2018 IPR018392 LysM domain K04M3_31940 fe68bf50bfedf8372ef32fb19a345e42 364 SUPERFAMILY SSF54106 38 86 8.24E-7 T 12-10-2018 K04M3_08790 110f1f48a83c313422549421a1c15229 154 PIRSF PIRSF020565 1 154 1.1E-66 T 12-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted K04M3_08790 110f1f48a83c313422549421a1c15229 154 Gene3D G3DSA:3.10.129.10 4 141 3.9E-23 T 12-10-2018 K04M3_08790 110f1f48a83c313422549421a1c15229 154 Pfam PF07977 FabA-like domain 11 132 3.6E-5 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_08790 110f1f48a83c313422549421a1c15229 154 SUPERFAMILY SSF54637 4 143 3.88E-29 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Gene3D G3DSA:3.30.450.210 36 161 7.5E-55 T 12-10-2018 IPR038515 CpxA, periplasmic domain superfamily K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Gene3D G3DSA:1.10.287.130 198 311 9.7E-34 T 12-10-2018 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 SMART SM00387 354 464 7.6E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 SUPERFAMILY SSF47384 234 310 6.67E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 SMART SM00388 248 310 1.8E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Gene3D G3DSA:3.30.565.10 313 463 5.1E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 309 1.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 5.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 5.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 5.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 5.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 461 6.3E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 SUPERFAMILY SSF55874 300 462 2.36E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Pfam PF00672 HAMP domain 195 242 7.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 3.1E-58 T 12-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain K04M3_30010 5c238a431afdbdad618fc8a37f5ef996 464 SMART SM00304 194 247 2.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 2.7E-115 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SUPERFAMILY SSF48008 79 270 1.7E-56 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.363 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 SMART SM00345 12 71 1.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Gene3D G3DSA:1.20.120.530 80 279 8.8E-34 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_21280 a8e8b4f1cdde3a2acf22fa30dae4218d 279 Pfam PF07840 FadR C-terminal domain 72 274 3.9E-69 T 12-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 SUPERFAMILY SSF51621 4 344 7.68E-86 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 SUPERFAMILY SSF50800 74 169 4.88E-26 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 Gene3D G3DSA:3.40.1380.20 342 476 7.7E-154 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-53 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 9.8E-167 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.4E-29 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 Gene3D G3DSA:2.40.33.10 74 172 7.7E-154 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 6.4E-129 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 SUPERFAMILY SSF52935 329 479 8.11E-38 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 K04M3_20940 1c1077e3fb5576ea136022a0d0968363 480 Gene3D G3DSA:3.20.20.60 6 341 7.7E-154 T 12-10-2018 K04M3_24130 1424fa8d95301622cba6d4bc66e65b6c 287 Pfam PF00753 Metallo-beta-lactamase superfamily 34 119 7.1E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_24130 1424fa8d95301622cba6d4bc66e65b6c 287 SUPERFAMILY SSF56281 29 274 4.74E-24 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_24130 1424fa8d95301622cba6d4bc66e65b6c 287 Gene3D G3DSA:3.60.15.10 4 285 1.8E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_24130 1424fa8d95301622cba6d4bc66e65b6c 287 SMART SM00849 34 263 0.004 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_12770 00016f36c7927195cf7248df28369aeb 411 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 42 342 4.2E-26 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_12770 00016f36c7927195cf7248df28369aeb 411 SUPERFAMILY SSF52540 1 360 4.62E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26700 b30e259b31336e7d83c940341b3dd99a 258 SUPERFAMILY SSF64167 11 256 2.75E-85 T 12-10-2018 K04M3_26700 b30e259b31336e7d83c940341b3dd99a 258 Gene3D G3DSA:3.40.1210.10 2 258 1.8E-95 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 K04M3_26700 b30e259b31336e7d83c940341b3dd99a 258 Pfam PF01975 Survival protein SurE 13 191 2.7E-61 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 K04M3_26700 b30e259b31336e7d83c940341b3dd99a 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.918 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 K04M3_26700 b30e259b31336e7d83c940341b3dd99a 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 5.6E-74 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 K04M3_23170 5572685ca396ed92ddb0d8d2b68f1296 154 Pfam PF00578 AhpC/TSA family 6 133 9.8E-37 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_23170 5572685ca396ed92ddb0d8d2b68f1296 154 SUPERFAMILY SSF52833 3 153 3.69E-47 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_23170 5572685ca396ed92ddb0d8d2b68f1296 154 Gene3D G3DSA:3.40.30.10 2 153 4.5E-46 T 12-10-2018 K04M3_23170 5572685ca396ed92ddb0d8d2b68f1296 154 PIRSF PIRSF000239 1 146 4.4E-18 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_34420 264f06a530939892d10299c5a13fe8bd 166 Pfam PF03748 Flagellar basal body-associated protein FliL 67 166 2.5E-14 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 SUPERFAMILY SSF50249 3 69 6.21E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 2.5E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 SMART SM00357 6 70 3.6E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 PIRSF PIRSF002599 1 70 2.3E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 Gene3D G3DSA:2.40.50.140 2 70 1.9E-28 T 12-10-2018 K04M3_37770 1fc89046037a28b0be2bc690cf2bea93 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 Gene3D G3DSA:3.30.70.270 143 303 1.5E-42 T 12-10-2018 K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 301 2.5E-38 T 12-10-2018 IPR000160 GGDEF domain K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 Gene3D G3DSA:3.30.450.20 12 142 4.4E-16 T 12-10-2018 K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 Pfam PF08448 PAS fold 19 129 4.6E-14 T 12-10-2018 IPR013656 PAS fold-4 K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 SUPERFAMILY SSF55785 19 130 9.95E-11 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 SMART SM00267 129 303 4.9E-37 T 12-10-2018 IPR000160 GGDEF domain K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 299 8.1E-39 T 12-10-2018 IPR000160 GGDEF domain K04M3_18470 3d0b8c4910e4fbca796d611ec25550aa 303 SUPERFAMILY SSF55073 144 300 5.96E-36 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_44550 6b857a68e74c6b71b9aba95a54447b99 1582 Pfam PF00691 OmpA family 647 741 4.5E-6 T 12-10-2018 IPR006665 OmpA-like domain K04M3_44550 6b857a68e74c6b71b9aba95a54447b99 1582 Gene3D G3DSA:3.30.1330.60 614 772 3.3E-13 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_44550 6b857a68e74c6b71b9aba95a54447b99 1582 SUPERFAMILY SSF103088 644 769 3.53E-13 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 Pfam PF02803 Thiolase, C-terminal domain 270 399 2.7E-45 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 2.3E-99 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 SUPERFAMILY SSF53901 271 399 5.76E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.5E-149 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 SUPERFAMILY SSF53901 4 270 5.01E-86 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 Gene3D G3DSA:3.40.47.10 126 398 2.6E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 PIRSF PIRSF000429 1 402 5.4E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 Gene3D G3DSA:3.40.47.10 6 276 2.6E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_45140 393b7ba4104b58c930dda4021256c3ea 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 K04M3_25790 f6d0dde782312ab6de8c9969b58b40cf 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 8.1E-5 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal K04M3_25790 f6d0dde782312ab6de8c9969b58b40cf 430 Pfam PF01551 Peptidase family M23 296 390 4.1E-31 T 12-10-2018 IPR016047 Peptidase M23 K04M3_25790 f6d0dde782312ab6de8c9969b58b40cf 430 Gene3D G3DSA:3.10.450.350 71 159 5.9E-11 T 12-10-2018 K04M3_25790 f6d0dde782312ab6de8c9969b58b40cf 430 SUPERFAMILY SSF51261 145 391 1.57E-71 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_25790 f6d0dde782312ab6de8c9969b58b40cf 430 Gene3D G3DSA:3.10.450.350 173 411 1.2E-80 T 12-10-2018 K04M3_25790 f6d0dde782312ab6de8c9969b58b40cf 430 Gene3D G3DSA:2.70.70.10 267 396 1.2E-80 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 SUPERFAMILY SSF52172 8 129 1.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 SUPERFAMILY SSF46894 136 232 7.09E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 6.7E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 Gene3D G3DSA:3.40.50.2300 2 121 2.0E-32 T 12-10-2018 K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 SMART SM00862 154 230 6.9E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 Pfam PF00072 Response regulator receiver domain 11 119 9.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 SMART SM00448 8 118 8.0E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45700 15e3cc37443ca016678bb8e8d15e875c 237 Gene3D G3DSA:1.10.10.10 122 237 2.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_24140 85db5856b2c541bca1a21b292c978dd6 419 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 4 397 7.4E-111 T 12-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related K04M3_24140 85db5856b2c541bca1a21b292c978dd6 419 Gene3D G3DSA:3.40.50.12780 6 322 3.7E-32 T 12-10-2018 K04M3_24140 85db5856b2c541bca1a21b292c978dd6 419 SUPERFAMILY SSF56801 157 268 2.75E-5 T 12-10-2018 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 SUPERFAMILY SSF51366 4 218 2.12E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 Gene3D G3DSA:3.20.20.70 5 221 2.4E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.2E-100 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.8E-92 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 K04M3_28800 f64621fb204df254bc2a8950bf55f486 223 PIRSF PIRSF001461 1 223 1.5E-106 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 Gene3D G3DSA:1.20.120.530 85 227 4.0E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 SUPERFAMILY SSF48008 88 224 8.37E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 Pfam PF07729 FCD domain 92 217 4.1E-26 T 12-10-2018 IPR011711 GntR, C-terminal K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 6.3E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 SUPERFAMILY SSF46785 16 110 1.73E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 SMART SM00895 92 219 3.0E-23 T 12-10-2018 IPR011711 GntR, C-terminal K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 Gene3D G3DSA:1.10.10.10 12 83 8.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 SMART SM00345 24 82 1.4E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.0E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_17080 cc844739cce4aeb48df05d6efb078916 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.0E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_01440 433615d9098fbb86b1d4cdc690a9bfe0 227 SUPERFAMILY SSF75217 4 173 1.9E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_01440 433615d9098fbb86b1d4cdc690a9bfe0 227 Gene3D G3DSA:3.40.1280.10 1 204 6.2E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_01440 433615d9098fbb86b1d4cdc690a9bfe0 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 8.2E-25 T 12-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 K04M3_01440 433615d9098fbb86b1d4cdc690a9bfe0 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.8E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 K04M3_01440 433615d9098fbb86b1d4cdc690a9bfe0 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.913 T 12-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 4.2E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Gene3D G3DSA:3.40.50.300 158 352 2.1E-62 T 12-10-2018 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 760 834 1.3E-9 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_39130 a8661c161fcb356528c944051e31139d 855 SMART SM00382 208 353 1.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_39130 a8661c161fcb356528c944051e31139d 855 SMART SM00382 588 748 6.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_39130 a8661c161fcb356528c944051e31139d 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 SMART SM01086 760 852 2.1E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_39130 a8661c161fcb356528c944051e31139d 855 SUPERFAMILY SSF52540 537 839 4.74E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39130 a8661c161fcb356528c944051e31139d 855 SUPERFAMILY SSF52540 169 498 1.78E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39130 a8661c161fcb356528c944051e31139d 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 587 753 1.1E-37 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Gene3D G3DSA:3.40.50.300 354 535 1.4E-41 T 12-10-2018 K04M3_39130 a8661c161fcb356528c944051e31139d 855 SUPERFAMILY SSF81923 11 128 9.03E-15 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Gene3D G3DSA:1.10.8.60 760 854 3.3E-9 T 12-10-2018 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Gene3D G3DSA:1.10.1780.10 1 157 7.2E-32 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_39130 a8661c161fcb356528c944051e31139d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 2.8E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 684 2.8E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 713 2.8E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 2.8E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_39130 a8661c161fcb356528c944051e31139d 855 Gene3D G3DSA:3.40.50.300 541 757 6.8E-63 T 12-10-2018 K04M3_41930 f2317e75e21f852df6ac74d6f337a537 544 SUPERFAMILY SSF52540 1 324 5.42E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_41930 f2317e75e21f852df6ac74d6f337a537 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 4.5E-146 T 12-10-2018 IPR022602 Protein of unknown function DUF2813 K04M3_41930 f2317e75e21f852df6ac74d6f337a537 544 Gene3D G3DSA:3.40.50.300 1 338 9.0E-16 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 SUPERFAMILY SSF111369 50 295 2.09E-59 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 Gene3D G3DSA:2.40.30.170 49 300 3.1E-95 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 Pfam PF13437 HlyD family secretion protein 173 287 8.0E-8 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 Pfam PF13533 Biotin-lipoyl like 63 110 4.3E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_36550 41193393a0b44008682aa125a3162745 380 Gene3D G3DSA:2.40.420.20 302 370 3.1E-95 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 Gene3D G3DSA:2.40.50.100 61 205 3.1E-95 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 Gene3D G3DSA:1.10.287.470 96 169 3.1E-95 T 12-10-2018 K04M3_36550 41193393a0b44008682aa125a3162745 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 371 2.4E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_20640 a6289090d1b83dcba2f7afb037ba0b33 210 SUPERFAMILY SSF53335 5 202 2.57E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_20640 a6289090d1b83dcba2f7afb037ba0b33 210 Gene3D G3DSA:3.40.50.150 2 195 2.4E-24 T 12-10-2018 K04M3_20640 a6289090d1b83dcba2f7afb037ba0b33 210 Pfam PF13489 Methyltransferase domain 27 183 5.5E-14 T 12-10-2018 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 9.2E-94 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 Gene3D G3DSA:1.20.210.10 30 560 7.3E-184 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 502 2.7E-132 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38310 db30d7f3f9c05301384d25e187f2e494 678 SUPERFAMILY SSF81442 43 557 1.13E-175 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 3.5E-5 T 12-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.791 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 SUPERFAMILY SSF54211 169 253 2.02E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 SUPERFAMILY SSF56784 3 158 5.38E-39 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.7E-27 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Gene3D G3DSA:3.40.50.1000 1 165 2.6E-46 T 12-10-2018 IPR023214 HAD superfamily K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 5.8E-79 T 12-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Gene3D G3DSA:3.30.230.40 166 256 9.2E-36 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.042 T 12-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.9E-47 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Gene3D G3DSA:3.30.230.40 257 357 7.4E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 K04M3_11130 252cc393c03c2f37cfde087d7be5c2a4 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 K04M3_01630 e5d20f73c93e68751cdf14217d3988e8 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.3E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 K04M3_01630 e5d20f73c93e68751cdf14217d3988e8 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.282 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_01630 e5d20f73c93e68751cdf14217d3988e8 213 SUPERFAMILY SSF53271 2 212 2.98E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_01630 e5d20f73c93e68751cdf14217d3988e8 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.3E-70 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_01630 e5d20f73c93e68751cdf14217d3988e8 213 Gene3D G3DSA:3.40.50.2020 1 213 1.6E-79 T 12-10-2018 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 SUPERFAMILY SSF53067 12 131 4.53E-36 T 12-10-2018 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 Gene3D G3DSA:3.30.420.150 116 294 8.0E-91 T 12-10-2018 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 2.1E-86 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 Gene3D G3DSA:3.30.420.40 13 302 8.0E-91 T 12-10-2018 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 5.2E-101 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 PIRSF PIRSF001267 2 501 1.2E-200 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 SUPERFAMILY SSF53067 136 308 1.68E-47 T 12-10-2018 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 SUPERFAMILY SSF109604 312 500 1.19E-46 T 12-10-2018 K04M3_05470 7f6a782685ff307f3a9ff2aafc083c93 501 Gene3D G3DSA:1.10.3210.10 310 501 3.8E-57 T 12-10-2018 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 SUPERFAMILY SSF56796 3 356 9.81E-92 T 12-10-2018 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 Gene3D G3DSA:3.40.50.1970 3 159 1.2E-43 T 12-10-2018 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 Gene3D G3DSA:1.20.1090.10 160 360 2.6E-79 T 12-10-2018 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 1.1E-68 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 K04M3_03620 4555d9378ac84e0242f66071262fd993 360 PIRSF PIRSF000112 1 360 2.6E-94 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.1E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 SUPERFAMILY SSF48498 81 193 3.39E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 Gene3D G3DSA:1.10.357.10 1 194 1.2E-58 T 12-10-2018 K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 SUPERFAMILY SSF46689 2 73 1.64E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_35770 b15cbc846124ae56bc5a122e9ec85ca8 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 186 2.6E-7 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal K04M3_43340 e1c712f12031cd9b898b22d07e7ab33f 251 SUPERFAMILY SSF52540 2 227 1.1E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43340 e1c712f12031cd9b898b22d07e7ab33f 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43340 e1c712f12031cd9b898b22d07e7ab33f 251 SMART SM00382 26 213 5.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_43340 e1c712f12031cd9b898b22d07e7ab33f 251 Pfam PF00005 ABC transporter 18 164 6.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_43340 e1c712f12031cd9b898b22d07e7ab33f 251 Gene3D G3DSA:3.40.50.300 1 249 9.5E-62 T 12-10-2018 K04M3_24730 40d79164150319c376e632c3a7ace391 384 SUPERFAMILY SSF53335 190 370 1.55E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_24730 40d79164150319c376e632c3a7ace391 384 Gene3D G3DSA:3.40.50.150 8 181 5.5E-51 T 12-10-2018 K04M3_24730 40d79164150319c376e632c3a7ace391 384 Pfam PF05175 Methyltransferase small domain 200 373 1.3E-53 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 K04M3_24730 40d79164150319c376e632c3a7ace391 384 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.819 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 K04M3_24730 40d79164150319c376e632c3a7ace391 384 Gene3D G3DSA:3.40.50.150 188 380 2.0E-46 T 12-10-2018 K04M3_24730 40d79164150319c376e632c3a7ace391 384 Pfam PF08468 Methyltransferase small domain N-terminal 47 166 1.2E-5 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 K04M3_24730 40d79164150319c376e632c3a7ace391 384 PIRSF PIRSF037565 1 377 1.1E-171 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 7.5E-156 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 6.3E-14 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 Gene3D G3DSA:3.20.20.140 1 247 6.2E-37 T 12-10-2018 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.1E-148 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 996 4.1E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.148 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 SMART SM00481 4 73 5.6E-7 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal K04M3_20910 9565ed70d481af1f29edb08a85a17a12 1024 Pfam PF02811 PHP domain 8 100 3.2E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 SUPERFAMILY SSF53187 3 377 1.34E-56 T 12-10-2018 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 2.7E-127 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 Pfam PF07687 Peptidase dimerisation domain 174 285 1.0E-25 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 Gene3D G3DSA:3.30.70.360 177 292 4.7E-79 T 12-10-2018 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 Gene3D G3DSA:3.40.630.10 28 360 4.7E-79 T 12-10-2018 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 SUPERFAMILY SSF55031 177 290 1.64E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.542 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 K04M3_29000 3639eb08974df68a2dfd3be7a5c829d7 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 9.9E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Gene3D G3DSA:2.60.40.3500 22 136 6.0E-24 T 12-10-2018 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SUPERFAMILY SSF54106 468 513 6.02E-10 T 12-10-2018 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Pfam PF11741 AMIN domain 33 134 3.1E-16 T 12-10-2018 IPR021731 AMIN domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SMART SM00646 227 386 3.3E-63 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SUPERFAMILY SSF54106 406 450 4.45E-10 T 12-10-2018 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SUPERFAMILY SSF53187 164 389 5.34E-53 T 12-10-2018 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Gene3D G3DSA:3.10.350.10 466 516 1.1E-14 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Gene3D G3DSA:3.10.350.10 404 455 8.0E-14 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Gene3D G3DSA:3.10.350.10 517 568 1.8E-15 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SMART SM00257 407 450 1.2E-14 T 12-10-2018 IPR018392 LysM domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SMART SM00257 470 513 9.5E-15 T 12-10-2018 IPR018392 LysM domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SMART SM00257 523 566 1.8E-14 T 12-10-2018 IPR018392 LysM domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Pfam PF01476 LysM domain 471 513 6.4E-12 T 12-10-2018 IPR018392 LysM domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Pfam PF01476 LysM domain 524 566 1.5E-12 T 12-10-2018 IPR018392 LysM domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Pfam PF01476 LysM domain 408 450 1.1E-13 T 12-10-2018 IPR018392 LysM domain K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 166 386 1.1E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 SUPERFAMILY SSF54106 523 566 4.97E-10 T 12-10-2018 K04M3_29540 0edbe5bbf4bb5edd25c4ec0118abd28a 568 Gene3D G3DSA:3.40.630.40 152 395 4.4E-69 T 12-10-2018 K04M3_00910 78881f0ca0e23413380d54393ebe7fba 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 2.7E-71 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 K04M3_00910 78881f0ca0e23413380d54393ebe7fba 253 Gene3D G3DSA:3.20.20.140 1 253 1.3E-80 T 12-10-2018 K04M3_00910 78881f0ca0e23413380d54393ebe7fba 253 SUPERFAMILY SSF51556 1 253 2.56E-81 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_00910 78881f0ca0e23413380d54393ebe7fba 253 Pfam PF01026 TatD related DNase 2 252 2.6E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 K04M3_00910 78881f0ca0e23413380d54393ebe7fba 253 PIRSF PIRSF005902 1 253 1.4E-72 T 12-10-2018 IPR001130 TatD family GO:0016788 K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 5.9E-35 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 SUPERFAMILY SSF53218 7 168 1.7E-47 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.6E-85 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 Gene3D G3DSA:3.40.980.10 2 170 1.5E-52 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 PIRSF PIRSF006443 1 166 8.9E-67 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 9.0E-38 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 SMART SM00852 14 158 2.4E-28 T 12-10-2018 IPR001453 MoaB/Mog domain K04M3_21510 101fda201ba80323a797d7e3dcab7f22 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 1.1E-15 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 1.7E-22 T 12-10-2018 IPR011491 Flagellar hook protein FlgE K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Gene3D G3DSA:2.60.98.20 154 319 2.4E-22 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 Pfam PF00460 Flagella basal body rod protein 3 32 7.3E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 4.3E-96 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site K04M3_07710 c21e2ae6ceb847f75a2dbbf775bc5af1 437 SUPERFAMILY SSF117143 78 398 1.57E-69 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 2.7E-88 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.305 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 Gene3D G3DSA:3.40.470.10 1 225 8.2E-106 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 SMART SM00987 49 210 7.8E-41 T 12-10-2018 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 1.2E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 SMART SM00986 49 210 7.8E-41 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_04690 535f0fb457f137efdc16860fb971cd46 226 SUPERFAMILY SSF52141 4 222 2.94E-97 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_31730 b98bb72268d69840e26a3901d26dec8a 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.7E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 K04M3_31730 b98bb72268d69840e26a3901d26dec8a 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 9.0E-29 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 K04M3_31730 b98bb72268d69840e26a3901d26dec8a 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.955 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 Gene3D G3DSA:2.40.420.20 290 358 3.6E-76 T 12-10-2018 K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 Gene3D G3DSA:1.10.287.470 92 165 3.6E-76 T 12-10-2018 K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 SUPERFAMILY SSF111369 48 284 1.16E-51 T 12-10-2018 K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 Gene3D G3DSA:2.40.50.100 57 200 3.6E-76 T 12-10-2018 K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 278 1.1E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 360 2.9E-72 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_16900 ac29f4a3837382e985c5f9cc9dffa78f 389 Gene3D G3DSA:2.40.30.170 45 289 3.6E-76 T 12-10-2018 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Gene3D G3DSA:3.30.420.110 117 251 1.4E-36 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 SUPERFAMILY SSF48334 257 554 9.29E-93 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 835 24.845 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Gene3D G3DSA:3.40.50.300 557 833 1.3E-100 T 12-10-2018 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Pfam PF01624 MutS domain I 1 109 1.3E-38 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 SUPERFAMILY SSF53150 104 256 1.57E-41 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 SUPERFAMILY SSF55271 1 105 2.22E-38 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Pfam PF05190 MutS family domain IV 417 507 1.9E-30 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Pfam PF05188 MutS domain II 118 243 1.3E-30 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 PIRSF PIRSF037677 1 811 5.4E-156 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 SMART SM00533 273 580 2.3E-109 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Pfam PF05192 MutS domain III 259 548 2.4E-41 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Gene3D G3DSA:1.10.1420.10 256 548 6.1E-105 T 12-10-2018 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 840 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Pfam PF00488 MutS domain V 599 786 2.7E-87 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Gene3D G3DSA:1.10.1420.10 376 492 6.1E-105 T 12-10-2018 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 SUPERFAMILY SSF52540 556 787 3.0E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 SMART SM00534 596 783 2.8E-118 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 K04M3_26660 4a4282769db24a9c82ee38a2c7450456 843 Gene3D G3DSA:3.40.1170.10 1 111 4.5E-48 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 K04M3_29290 03b615b12d23b6fdb82e4cc5bdcde669 70 Gene3D G3DSA:1.10.10.610 1 70 1.9E-29 T 12-10-2018 IPR036685 YehU-like superfamily K04M3_29290 03b615b12d23b6fdb82e4cc5bdcde669 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.99 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 K04M3_29290 03b615b12d23b6fdb82e4cc5bdcde669 70 PIRSF PIRSF006169 1 70 3.9E-35 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 K04M3_29290 03b615b12d23b6fdb82e4cc5bdcde669 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.6E-34 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 K04M3_29290 03b615b12d23b6fdb82e4cc5bdcde669 70 SUPERFAMILY SSF118001 1 70 2.48E-28 T 12-10-2018 IPR036685 YehU-like superfamily K04M3_29290 03b615b12d23b6fdb82e4cc5bdcde669 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 4.0E-23 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 SUPERFAMILY SSF55035 146 261 9.55E-37 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 Gene3D G3DSA:3.90.770.10 92 405 1.3E-107 T 12-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 Gene3D G3DSA:3.30.70.420 146 261 1.3E-107 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 SUPERFAMILY SSF56542 26 409 8.89E-78 T 12-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 1.4E-110 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 2.0E-37 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 2.0E-37 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 2.0E-37 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 2.0E-37 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 2.0E-37 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_40200 ac968342d0c0f9a4110cccab7b5ff9ef 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 2.0E-37 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 SMART SM00304 218 270 1.5E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 Pfam PF00672 HAMP domain 219 267 2.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 SMART SM00283 285 546 1.3E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 SUPERFAMILY SSF58104 239 547 1.07E-69 T 12-10-2018 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 Gene3D G3DSA:1.10.287.950 217 547 3.8E-69 T 12-10-2018 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 4.8E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.8E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_35300 cfe7ce6ee24a34d136ced2dd1ec46401 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 512 1.6E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_48840 594431b745ad584899287a47c37fcb6b 496 Pfam PF07690 Major Facilitator Superfamily 17 408 1.8E-56 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_48840 594431b745ad584899287a47c37fcb6b 496 Gene3D G3DSA:1.20.1250.20 264 496 1.7E-13 T 12-10-2018 K04M3_48840 594431b745ad584899287a47c37fcb6b 496 SUPERFAMILY SSF103473 10 493 3.14E-61 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_48840 594431b745ad584899287a47c37fcb6b 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 3.0E-108 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 K04M3_48840 594431b745ad584899287a47c37fcb6b 496 Gene3D G3DSA:1.20.1720.10 14 207 1.1E-45 T 12-10-2018 K04M3_50530 f3cb6d3d800d30c3724818459e16019c 490 SMART SM00400 37 92 6.8E-6 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 K04M3_50530 f3cb6d3d800d30c3724818459e16019c 490 Pfam PF01807 CHC2 zinc finger 5 102 1.7E-13 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 K04M3_50530 f3cb6d3d800d30c3724818459e16019c 490 SUPERFAMILY SSF57783 3 101 2.21E-19 T 12-10-2018 K04M3_50530 f3cb6d3d800d30c3724818459e16019c 490 Gene3D G3DSA:3.90.580.10 2 104 7.3E-20 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 K04M3_26910 09613e5dffe8f1706f98bc4c76a65735 208 SUPERFAMILY SSF89069 4 67 2.88E-21 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 K04M3_26910 09613e5dffe8f1706f98bc4c76a65735 208 Gene3D G3DSA:1.10.10.880 2 67 6.8E-25 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 K04M3_26910 09613e5dffe8f1706f98bc4c76a65735 208 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 191 1.3E-19 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal K04M3_26910 09613e5dffe8f1706f98bc4c76a65735 208 PIRSF PIRSF016938 1 205 7.7E-35 T 12-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 K04M3_26910 09613e5dffe8f1706f98bc4c76a65735 208 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 99 5.5E-35 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 SUPERFAMILY SSF57770 147 181 4.32E-13 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Gene3D G3DSA:2.40.50.140 580 691 2.9E-34 T 12-10-2018 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Pfam PF01588 Putative tRNA binding domain 596 688 6.5E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Gene3D G3DSA:3.40.50.620 13 389 6.8E-162 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 SUPERFAMILY SSF50249 590 690 4.9E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 SUPERFAMILY SSF47323 394 552 3.49E-45 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 13 540 6.6E-202 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Gene3D G3DSA:2.20.28.20 147 181 6.8E-162 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 SUPERFAMILY SSF52374 10 392 2.1E-101 T 12-10-2018 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Pfam PF09334 tRNA synthetases class I (M) 13 401 1.8E-165 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 559 690 1.0E-46 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.618 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 Gene3D G3DSA:1.10.730.10 394 531 1.9E-35 T 12-10-2018 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 7.0E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 7.0E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 7.0E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 7.0E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 7.0E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_21240 dd086100606bbee2a89ba13fcc64afbe 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 7.0E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 K04M3_08980 614e8a0fce8835055592f51887745a33 402 Gene3D G3DSA:3.40.50.300 1 216 2.0E-73 T 12-10-2018 K04M3_08980 614e8a0fce8835055592f51887745a33 402 SUPERFAMILY SSF52540 74 359 5.19E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08980 614e8a0fce8835055592f51887745a33 402 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_08980 614e8a0fce8835055592f51887745a33 402 SMART SM00490 257 338 3.1E-30 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_08980 614e8a0fce8835055592f51887745a33 402 SMART SM00487 20 221 2.4E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_08980 614e8a0fce8835055592f51887745a33 402 Pfam PF00271 Helicase conserved C-terminal domain 232 338 9.3E-27 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_08980 614e8a0fce8835055592f51887745a33 402 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.3E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_08980 614e8a0fce8835055592f51887745a33 402 Gene3D G3DSA:3.40.50.300 217 372 1.3E-45 T 12-10-2018 K04M3_16970 c7c49bbaa53d55476643fd7c2bd8f5e0 218 Gene3D G3DSA:3.40.50.620 3 218 1.4E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_16970 c7c49bbaa53d55476643fd7c2bd8f5e0 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 214 8.6E-81 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 K04M3_16970 c7c49bbaa53d55476643fd7c2bd8f5e0 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 207 2.0E-77 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 K04M3_16970 c7c49bbaa53d55476643fd7c2bd8f5e0 218 PIRSF PIRSF006293 2 218 3.2E-78 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 K04M3_16970 c7c49bbaa53d55476643fd7c2bd8f5e0 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 215 46.185 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 K04M3_16970 c7c49bbaa53d55476643fd7c2bd8f5e0 218 SUPERFAMILY SSF52402 5 214 4.19E-64 T 12-10-2018 K04M3_26900 2d7f31021b5ce6ea50f51f22d12de30d 319 PIRSF PIRSF005427 1 318 2.2E-83 T 12-10-2018 IPR005588 MucB/RseB K04M3_26900 2d7f31021b5ce6ea50f51f22d12de30d 319 Gene3D G3DSA:2.50.20.10 24 208 5.7E-51 T 12-10-2018 K04M3_26900 2d7f31021b5ce6ea50f51f22d12de30d 319 Gene3D G3DSA:3.30.200.100 218 317 1.4E-29 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily K04M3_26900 2d7f31021b5ce6ea50f51f22d12de30d 319 Pfam PF03888 MucB/RseB N-terminal domain 26 195 3.9E-57 T 12-10-2018 IPR033434 MucB/RseB, N-terminal K04M3_26900 2d7f31021b5ce6ea50f51f22d12de30d 319 Pfam PF17188 MucB/RseB C-terminal domain 218 311 1.8E-28 T 12-10-2018 IPR033436 MucB/RseB, C-terminal K04M3_10920 64a2a6fe340ab039b1c2e8432fef153d 228 Pfam PF13500 AAA domain 4 211 1.2E-38 T 12-10-2018 K04M3_10920 64a2a6fe340ab039b1c2e8432fef153d 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.0E-54 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 K04M3_10920 64a2a6fe340ab039b1c2e8432fef153d 228 SUPERFAMILY SSF52540 1 215 9.87E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10920 64a2a6fe340ab039b1c2e8432fef153d 228 Gene3D G3DSA:3.40.50.300 3 224 1.7E-69 T 12-10-2018 K04M3_10920 64a2a6fe340ab039b1c2e8432fef153d 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.7 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 K04M3_10920 64a2a6fe340ab039b1c2e8432fef153d 228 PIRSF PIRSF006755 1 226 4.1E-78 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 K04M3_31660 41285f742651a37b677404a628f0e689 596 Pfam PF16188 C-terminal region of peptidase_M24 534 592 3.6E-22 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain K04M3_31660 41285f742651a37b677404a628f0e689 596 Gene3D G3DSA:3.40.350.10 1 146 1.5E-35 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_31660 41285f742651a37b677404a628f0e689 596 Pfam PF00557 Metallopeptidase family M24 309 524 1.8E-43 T 12-10-2018 IPR000994 Peptidase M24 K04M3_31660 41285f742651a37b677404a628f0e689 596 Gene3D G3DSA:3.40.350.10 147 292 6.7E-25 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_31660 41285f742651a37b677404a628f0e689 596 SUPERFAMILY SSF55920 303 559 2.49E-56 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like K04M3_31660 41285f742651a37b677404a628f0e689 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 3.0E-20 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 K04M3_31660 41285f742651a37b677404a628f0e689 596 Gene3D G3DSA:3.90.230.10 300 593 6.5E-95 T 12-10-2018 K04M3_31660 41285f742651a37b677404a628f0e689 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 7.7E-36 T 12-10-2018 K04M3_31660 41285f742651a37b677404a628f0e689 596 SUPERFAMILY SSF53092 6 131 3.49E-21 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_26430 5eafd42c522818f920e9b70457f197bd 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 4.2E-206 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 K04M3_26430 5eafd42c522818f920e9b70457f197bd 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 219.697 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 K04M3_26430 5eafd42c522818f920e9b70457f197bd 522 SUPERFAMILY SSF55931 6 513 2.09E-200 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 K04M3_26430 5eafd42c522818f920e9b70457f197bd 522 Gene3D G3DSA:3.30.590.20 17 522 1.6E-191 T 12-10-2018 K04M3_26430 5eafd42c522818f920e9b70457f197bd 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 8.1E-167 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 K04M3_13530 6aac6e4f6b065b69231958b1e9ee7c46 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 1.4E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_13530 6aac6e4f6b065b69231958b1e9ee7c46 132 Gene3D G3DSA:3.10.180.10 5 132 8.9E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_13530 6aac6e4f6b065b69231958b1e9ee7c46 132 SUPERFAMILY SSF54593 5 130 1.07E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_26070 b820f432546be3a88b18ba400e2c0e4b 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 1.3E-75 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein K04M3_26070 b820f432546be3a88b18ba400e2c0e4b 238 Gene3D G3DSA:2.40.50.580 1 80 1.5E-28 T 12-10-2018 K04M3_26070 b820f432546be3a88b18ba400e2c0e4b 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.11 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein K04M3_26070 b820f432546be3a88b18ba400e2c0e4b 238 Gene3D G3DSA:3.40.1350.60 81 237 2.4E-54 T 12-10-2018 K04M3_26070 b820f432546be3a88b18ba400e2c0e4b 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 230 1.2E-77 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 PIRSF PIRSF500061 5 513 3.9E-157 T 12-10-2018 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 Gene3D G3DSA:3.40.5.90 1 79 2.9E-33 T 12-10-2018 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 PIRSF PIRSF006429 11 512 1.3E-149 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 11 40 2.4E-11 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 77 4.1E-8 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 SMART SM00704 47 82 1.0E-7 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 SMART SM00704 9 46 1.7E-12 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 Gene3D G3DSA:3.20.20.70 176 512 5.2E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 SUPERFAMILY SSF51395 127 505 4.76E-100 T 12-10-2018 K04M3_42730 b4e8033509007999cdcad1e037bac4d9 513 Pfam PF01645 Conserved region in glutamate synthase 172 480 5.4E-91 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 SUPERFAMILY SSF52009 348 465 2.62E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 8.7E-6 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 8.7E-6 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 8.7E-6 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 SUPERFAMILY SSF51621 460 787 7.99E-99 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Gene3D G3DSA:3.30.1490.20 1 192 7.5E-74 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 SUPERFAMILY SSF56059 1 383 2.0E-107 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 345 1.3E-120 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 PIRSF PIRSF000854 1 790 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 787 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Gene3D G3DSA:3.50.30.10 358 476 6.4E-41 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Gene3D G3DSA:3.30.470.20 193 356 5.3E-59 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Gene3D G3DSA:3.20.20.60 477 787 6.8E-105 T 12-10-2018 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 2.8E-62 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 K04M3_46310 b4cc87e8019b341c30784c2bb4169763 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 1.5E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 K04M3_05610 0a457f9161827675184fecb968f398f8 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.041 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 K04M3_05610 0a457f9161827675184fecb968f398f8 350 Gene3D G3DSA:2.40.10.240 64 163 9.2E-117 T 12-10-2018 K04M3_05610 0a457f9161827675184fecb968f398f8 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 8.8E-133 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 K04M3_05610 0a457f9161827675184fecb968f398f8 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 2.6E-158 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 K04M3_05610 0a457f9161827675184fecb968f398f8 350 Gene3D G3DSA:3.40.1780.10 14 345 9.2E-117 T 12-10-2018 K04M3_05610 0a457f9161827675184fecb968f398f8 350 SUPERFAMILY SSF111337 1 345 6.8E-138 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Pfam PF00696 Amino acid kinase family 5 273 6.6E-44 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Pfam PF00742 Homoserine dehydrogenase 600 795 9.8E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 PIRSF PIRSF000727 5 802 3.9E-290 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Gene3D G3DSA:3.40.1160.10 8 290 1.2E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Gene3D G3DSA:3.30.2130.10 298 449 1.9E-7 T 12-10-2018 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 8.2E-66 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Gene3D G3DSA:3.30.360.10 611 781 4.9E-103 T 12-10-2018 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 SUPERFAMILY SSF55347 600 783 1.11E-44 T 12-10-2018 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Gene3D G3DSA:3.40.50.720 451 798 4.9E-103 T 12-10-2018 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 SUPERFAMILY SSF53633 5 291 1.57E-57 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 SUPERFAMILY SSF51735 448 622 1.61E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 8.8E-16 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 K04M3_29040 156a00a4dece886fdb03e7aace4f2909 802 Gene3D G3DSA:1.20.120.1320 44 137 1.2E-73 T 12-10-2018 K04M3_02320 88ce2ea6cb9d287946a73ee89a2ab972 305 Pfam PF01040 UbiA prenyltransferase family 21 270 1.1E-37 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 K04M3_02320 88ce2ea6cb9d287946a73ee89a2ab972 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 8.0E-99 T 12-10-2018 K04M3_02320 88ce2ea6cb9d287946a73ee89a2ab972 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.807 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 K04M3_02320 88ce2ea6cb9d287946a73ee89a2ab972 305 PIRSF PIRSF005355 1 303 2.4E-85 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Gene3D G3DSA:3.40.630.30 462 604 2.4E-25 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Gene3D G3DSA:1.10.40.30 363 433 3.0E-146 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 SUPERFAMILY SSF55729 466 584 6.62E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Gene3D G3DSA:1.20.200.10 108 446 3.0E-146 T 12-10-2018 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.5E-23 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.1E-201 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 8.1E-9 T 12-10-2018 IPR000182 GNAT domain K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 SUPERFAMILY SSF48557 3 456 2.67E-140 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Pfam PF00206 Lyase 6 301 4.4E-88 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PIRSF PIRSF036456 1 624 0.0 T 12-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Gene3D G3DSA:1.10.275.10 1 107 6.6E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.123 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_28960 c673f6e65e92f679f53fe118a4dd1e8a 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_39580 86ee6b83e931b5ceba48927069d11766 505 Pfam PF12236 Bacteriophage head to tail connecting protein 13 472 3.7E-64 T 12-10-2018 IPR020991 Head-to-tail connector protein, podovirus-type K04M3_01840 436f8720f7751d8a58ec526ddb0cb9b1 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 362 1.3E-121 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase K04M3_01840 436f8720f7751d8a58ec526ddb0cb9b1 369 Gene3D G3DSA:3.90.1150.10 249 369 3.0E-35 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_01840 436f8720f7751d8a58ec526ddb0cb9b1 369 Gene3D G3DSA:3.40.640.10 5 247 7.0E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_01840 436f8720f7751d8a58ec526ddb0cb9b1 369 SUPERFAMILY SSF53383 14 365 1.33E-109 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_01840 436f8720f7751d8a58ec526ddb0cb9b1 369 PIRSF PIRSF000390 1 369 3.9E-107 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase K04M3_26170 14b0ceeb31a463b731e2a382ff5b970a 556 Pfam PF00916 Sulfate permease family 11 376 3.5E-85 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 K04M3_26170 14b0ceeb31a463b731e2a382ff5b970a 556 SUPERFAMILY SSF52091 439 541 1.81E-11 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_26170 14b0ceeb31a463b731e2a382ff5b970a 556 Gene3D G3DSA:3.30.750.24 428 550 2.3E-14 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_26170 14b0ceeb31a463b731e2a382ff5b970a 556 Pfam PF01740 STAS domain 440 533 7.3E-12 T 12-10-2018 IPR002645 STAS domain K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 SMART SM00344 10 116 6.9E-26 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 SUPERFAMILY SSF46785 10 67 7.52E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 1.8E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.9E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 SUPERFAMILY SSF54909 75 149 3.89E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 Gene3D G3DSA:3.30.70.920 74 146 4.6E-15 T 12-10-2018 K04M3_44390 233c5c5485baca775017bfc79e2c2bbf 150 Gene3D G3DSA:1.10.10.10 3 63 7.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03010 41170cbf4a3b3635146744ec6f0bce21 205 SUPERFAMILY SSF52540 25 200 3.03E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03010 41170cbf4a3b3635146744ec6f0bce21 205 Pfam PF01583 Adenylylsulphate kinase 31 185 3.2E-70 T 12-10-2018 K04M3_03010 41170cbf4a3b3635146744ec6f0bce21 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.611 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 K04M3_03010 41170cbf4a3b3635146744ec6f0bce21 205 Gene3D G3DSA:3.40.50.300 9 205 2.4E-78 T 12-10-2018 K04M3_03010 41170cbf4a3b3635146744ec6f0bce21 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 5.7E-81 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 611 33.222 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 148 4.5E-26 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 611 3.6E-247 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 Gene3D G3DSA:2.40.170.20 155 611 5.2E-119 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 SUPERFAMILY SSF56935 29 611 4.27E-108 T 12-10-2018 K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 Pfam PF00593 TonB dependent receptor 198 609 1.6E-43 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 Gene3D G3DSA:2.170.130.10 24 153 9.2E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_30860 84396bbb2d8e1ad5faf59b908e105a54 611 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 12-10-2018 IPR010916 TonB box, conserved site K04M3_14910 d4c80cf4e94b9c6a1b573a49ee2f0dc1 154 SUPERFAMILY SSF55729 1 153 1.03E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_14910 d4c80cf4e94b9c6a1b573a49ee2f0dc1 154 Pfam PF13673 Acetyltransferase (GNAT) domain 29 138 5.1E-20 T 12-10-2018 IPR000182 GNAT domain K04M3_14910 d4c80cf4e94b9c6a1b573a49ee2f0dc1 154 Gene3D G3DSA:3.40.630.30 1 154 2.0E-44 T 12-10-2018 K04M3_35880 95a8aaa41f8c62daa67b89fd81da01ae 401 Gene3D G3DSA:2.40.160.20 256 401 2.0E-5 T 12-10-2018 K04M3_35880 95a8aaa41f8c62daa67b89fd81da01ae 401 Pfam PF10082 Putative beta-barrel porin 2 34 396 2.8E-28 T 12-10-2018 IPR018759 Putative beta-barrel porin 2 K04M3_35880 95a8aaa41f8c62daa67b89fd81da01ae 401 SUPERFAMILY SSF56925 280 399 8.11E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF52440 1 127 3.74E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF56059 128 401 1.43E-108 T 12-10-2018 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.11 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.40.50.1380 937 1072 4.5E-33 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.386 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.1E-41 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 6.8E-38 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.2E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF48108 397 554 4.84E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SMART SM00851 955 1041 1.3E-25 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SMART SM01096 424 547 1.6E-74 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.30.470.20 665 934 1.5E-124 T 12-10-2018 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.30.470.20 119 403 2.9E-129 T 12-10-2018 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF52335 937 1071 2.75E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.40.50.20 554 662 2.4E-49 T 12-10-2018 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.40.50.20 1 116 2.2E-50 T 12-10-2018 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF56059 673 932 1.41E-103 T 12-10-2018 K04M3_04410 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:1.10.1030.10 404 553 3.0E-53 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 867 967 1.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 763 863 1.3E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 555 655 6.1E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 453 551 3.3E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 660 759 7.0E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SUPERFAMILY SSF49313 2125 2217 7.85E-18 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SUPERFAMILY SSF49313 1940 2033 2.67E-15 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 346 452 2.9E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SMART SM00736 2036 2127 3.6E-8 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SMART SM00736 2128 2219 4.4E-10 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SMART SM00736 1942 2035 1.1E-6 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.40.160.20 3026 3206 3.0E-15 T 12-10-2018 K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SUPERFAMILY SSF56925 3029 3204 6.28E-10 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Pfam PF13205 Bacterial Ig-like domain 216 340 1.2E-16 T 12-10-2018 IPR032812 SbsA, Ig-like domain K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SUPERFAMILY SSF141072 2392 2485 4.18E-6 T 12-10-2018 IPR038081 CalX-like domain superfamily K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 1939 2030 1.9E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 2124 2213 1.5E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 Gene3D G3DSA:2.60.40.10 2032 2122 2.7E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_44630 c5b1a50705464a3420e4dedef4abffc5 3210 SUPERFAMILY SSF49313 2033 2125 1.65E-16 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 K04M3_16720 80f5b03008f2bde97399b6746ecdb887 301 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 6 300 9.8E-97 T 12-10-2018 IPR020020 Luciferase-type oxidoreductase K04M3_16720 80f5b03008f2bde97399b6746ecdb887 301 Gene3D G3DSA:3.20.20.30 3 301 1.8E-68 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 K04M3_16720 80f5b03008f2bde97399b6746ecdb887 301 Pfam PF00296 Luciferase-like monooxygenase 32 224 2.6E-29 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 K04M3_16720 80f5b03008f2bde97399b6746ecdb887 301 SUPERFAMILY SSF51679 41 301 7.8E-47 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 K04M3_30830 06e280483ca1d28d4b98f9e089ec8d66 151 SUPERFAMILY SSF54928 49 142 3.09E-27 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 K04M3_30830 06e280483ca1d28d4b98f9e089ec8d66 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 1.2E-17 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 K04M3_30830 06e280483ca1d28d4b98f9e089ec8d66 151 Gene3D G3DSA:3.30.70.330 45 146 2.8E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily K04M3_30830 06e280483ca1d28d4b98f9e089ec8d66 151 SMART SM00360 63 135 1.4E-20 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 282 4.5E-31 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 378 2.7E-14 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 SUPERFAMILY SSF51419 32 285 5.82E-62 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01182 Ornithine decarboxylase signature 96 120 3.1E-7 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01182 Ornithine decarboxylase signature 53 80 3.1E-7 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01182 Ornithine decarboxylase signature 365 378 3.1E-7 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 3.6E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 3.6E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 3.6E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 3.6E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 SUPERFAMILY SSF50621 246 398 2.3E-34 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 Gene3D G3DSA:2.40.37.10 264 399 1.3E-40 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_33160 a92d65a87a01bab33eaf84ddccbf7f71 400 Gene3D G3DSA:3.20.20.10 34 263 2.7E-46 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 148 274 3.9E-47 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 298 698 7.3E-157 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 Gene3D G3DSA:3.30.9.10 381 605 1.5E-134 T 12-10-2018 K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 37 693 27.782 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 Pfam PF01266 FAD dependent oxidoreductase 298 668 2.7E-44 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 Gene3D G3DSA:3.40.50.150 39 284 1.8E-108 T 12-10-2018 K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 Gene3D G3DSA:3.50.50.60 297 695 1.5E-134 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_22340 e157c8a1c0df43960a49fa4f9f2facbd 704 SUPERFAMILY SSF51905 298 695 1.36E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_06000 3e19cfb8774f7334ad6e6284e7d8e354 364 SUPERFAMILY SSF56672 58 226 6.67E-8 T 12-10-2018 K04M3_06000 3e19cfb8774f7334ad6e6284e7d8e354 364 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 49 235 6.1E-18 T 12-10-2018 IPR000477 Reverse transcriptase domain K04M3_06000 3e19cfb8774f7334ad6e6284e7d8e354 364 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 88 106 2.3E-10 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 K04M3_06000 3e19cfb8774f7334ad6e6284e7d8e354 364 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 184 195 2.3E-10 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 K04M3_06000 3e19cfb8774f7334ad6e6284e7d8e354 364 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 151 164 2.3E-10 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 K04M3_06000 3e19cfb8774f7334ad6e6284e7d8e354 364 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 72 86 2.3E-10 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 Gene3D G3DSA:1.10.10.10 7 94 6.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 SUPERFAMILY SSF46785 4 87 7.45E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 Pfam PF03466 LysR substrate binding domain 94 289 5.8E-28 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 SUPERFAMILY SSF53850 95 290 1.21E-34 T 12-10-2018 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 Gene3D G3DSA:3.40.190.10 103 286 1.2E-45 T 12-10-2018 K04M3_25340 abe62f9bd53501e8eeb57a48a285d78c 315 Gene3D G3DSA:3.40.190.10 163 259 1.2E-45 T 12-10-2018 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.1E-139 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.326 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 SUPERFAMILY SSF52096 25 282 1.06E-83 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 Gene3D G3DSA:3.90.226.10 25 285 2.3E-81 T 12-10-2018 K04M3_22280 2230638572ba59c9a2724ff994e079cd 308 Pfam PF01039 Carboxyl transferase domain 99 239 5.4E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 K04M3_38170 3127b9bc7f9ab6262606d51da8b917c5 292 SUPERFAMILY SSF103481 42 142 5.1E-9 T 12-10-2018 K04M3_38170 3127b9bc7f9ab6262606d51da8b917c5 292 SUPERFAMILY SSF103481 183 285 5.23E-15 T 12-10-2018 K04M3_38170 3127b9bc7f9ab6262606d51da8b917c5 292 Pfam PF00892 EamA-like transporter family 11 138 7.5E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_38170 3127b9bc7f9ab6262606d51da8b917c5 292 Pfam PF00892 EamA-like transporter family 150 279 1.3E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_08150 f1e1538c7e4df601dcda1325f475a3c9 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 2.0E-69 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 K04M3_08150 f1e1538c7e4df601dcda1325f475a3c9 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 7.0E-84 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 Gene3D G3DSA:2.60.15.10 4 91 1.2E-30 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 Gene3D G3DSA:1.20.5.440 92 135 2.5E-19 T 12-10-2018 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.6E-11 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-40 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 9.0E-44 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.2E-28 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.814 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32220 eb15769092a576367b4dd7c8467926b4 140 SUPERFAMILY SSF46604 89 138 2.62E-14 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_35530 908cdca92c75729af9abe3c92e327078 700 SUPERFAMILY SSF56935 36 700 2.43E-132 T 12-10-2018 K04M3_35530 908cdca92c75729af9abe3c92e327078 700 Pfam PF00593 TonB dependent receptor 243 699 7.0E-62 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_35530 908cdca92c75729af9abe3c92e327078 700 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 699 1.1E-105 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_35530 908cdca92c75729af9abe3c92e327078 700 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 12-10-2018 IPR010916 TonB box, conserved site K04M3_35530 908cdca92c75729af9abe3c92e327078 700 Gene3D G3DSA:2.170.130.10 37 169 2.4E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_35530 908cdca92c75729af9abe3c92e327078 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 159 1.3E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_35530 908cdca92c75729af9abe3c92e327078 700 Gene3D G3DSA:2.40.170.20 170 700 4.4E-131 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 6.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 6.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 6.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 6.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.489 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.0E-6 T 12-10-2018 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.0E-6 T 12-10-2018 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.0E-6 T 12-10-2018 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 Pfam PF00206 Lyase 13 337 6.2E-92 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 SUPERFAMILY SSF48557 5 455 2.67E-135 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 Gene3D G3DSA:1.10.275.10 6 133 3.6E-49 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 Gene3D G3DSA:1.20.200.10 134 400 1.2E-95 T 12-10-2018 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 Pfam PF10415 Fumarase C C-terminus 403 455 1.8E-18 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 Gene3D G3DSA:1.10.40.30 403 454 7.5E-18 T 12-10-2018 K04M3_30140 1f45e50e18c442d7aab7d18b1c63a61e 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 K04M3_43820 1b29073ddeed34e93a3e9c91a7582649 535 Gene3D G3DSA:3.90.226.10 273 535 7.2E-105 T 12-10-2018 K04M3_43820 1b29073ddeed34e93a3e9c91a7582649 535 SUPERFAMILY SSF52096 237 517 1.49E-85 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_43820 1b29073ddeed34e93a3e9c91a7582649 535 Gene3D G3DSA:3.90.226.10 1 270 5.6E-97 T 12-10-2018 K04M3_43820 1b29073ddeed34e93a3e9c91a7582649 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-151 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 K04M3_43820 1b29073ddeed34e93a3e9c91a7582649 535 SUPERFAMILY SSF52096 24 267 2.18E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 1.8E-206 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 Gene3D G3DSA:3.80.30.20 7 369 2.5E-138 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 PIRSF PIRSF000167 9 460 2.4E-174 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 SMART SM00729 58 278 6.3E-56 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 SUPERFAMILY SSF102114 12 450 3.01E-146 T 12-10-2018 K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 Gene3D G3DSA:1.10.10.920 370 463 9.6E-35 T 12-10-2018 K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 Pfam PF04055 Radical SAM superfamily 63 234 2.3E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_01010 509c84f4442fe096f6f60b4f076a46d7 463 Pfam PF06969 HemN C-terminal domain 369 437 5.5E-12 T 12-10-2018 IPR010723 HemN, C-terminal K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_07730 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 K04M3_16270 3ec5c4c0d596840df3d681248615aaf7 577 Pfam PF11949 Protein of unknown function (DUF3466) 5 208 2.1E-7 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 K04M3_16270 3ec5c4c0d596840df3d681248615aaf7 577 Pfam PF11949 Protein of unknown function (DUF3466) 254 577 1.3E-53 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 K04M3_16270 3ec5c4c0d596840df3d681248615aaf7 577 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 558 577 0.001 T 12-10-2018 IPR020008 GlyGly-CTERM domain K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Gene3D G3DSA:3.30.1360.30 271 420 1.6E-195 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.0E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 3.3E-266 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.1E-104 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 SUPERFAMILY SSF55681 108 583 1.7E-101 T 12-10-2018 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Gene3D G3DSA:3.30.930.10 118 578 1.6E-195 T 12-10-2018 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Pfam PF02938 GAD domain 307 406 4.5E-30 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 SUPERFAMILY SSF50249 1 105 4.57E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Gene3D G3DSA:2.40.50.140 1 106 1.2E-34 T 12-10-2018 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.274 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 K04M3_10340 fd413e75576831d8410f3a42916ac2d0 592 SUPERFAMILY SSF55261 288 419 3.43E-46 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 K04M3_38370 915c912fae3be337ce619d076672dfcc 132 SUPERFAMILY SSF55298 12 127 4.24E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_38370 915c912fae3be337ce619d076672dfcc 132 Pfam PF01042 Endoribonuclease L-PSP 18 126 2.7E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 K04M3_38370 915c912fae3be337ce619d076672dfcc 132 Gene3D G3DSA:3.30.1330.40 10 127 2.4E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 SUPERFAMILY SSF51366 282 477 5.49E-54 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 1.4E-94 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 35.067 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 Gene3D G3DSA:3.20.20.70 30 280 2.2E-174 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 Gene3D G3DSA:3.20.20.70 281 473 2.2E-174 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 SUPERFAMILY SSF51366 23 276 8.83E-82 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 473 3.6E-57 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 K04M3_20210 8893e86f67686cc27ffdfbb58865e8b3 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 30.285 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 K04M3_07820 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 K04M3_07820 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_07820 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.1E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 K04M3_07820 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 9 169 6.2E-62 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_07820 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 SUPERFAMILY SSF53850 89 295 1.19E-39 T 12-10-2018 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 SUPERFAMILY SSF46785 1 112 1.72E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 Gene3D G3DSA:1.10.10.10 1 92 2.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 Gene3D G3DSA:3.40.190.10 163 267 2.2E-72 T 12-10-2018 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 Pfam PF03466 LysR substrate binding domain 89 290 4.9E-42 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_20350 d4a1b01d30cf10ad790c61db679b7efe 303 Gene3D G3DSA:3.40.190.10 93 290 2.2E-72 T 12-10-2018 K04M3_11290 8b6e762bfdaef60bf5f159c47e0e4659 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site K04M3_11290 8b6e762bfdaef60bf5f159c47e0e4659 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 3.1E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 K04M3_11290 8b6e762bfdaef60bf5f159c47e0e4659 286 Pfam PF01226 Formate/nitrite transporter 14 275 2.0E-73 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 K04M3_11290 8b6e762bfdaef60bf5f159c47e0e4659 286 Gene3D G3DSA:1.20.1080.10 27 280 2.4E-94 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_11290 8b6e762bfdaef60bf5f159c47e0e4659 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 2.7E-112 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 K04M3_11980 167c585151b5b4cc6b46f34bac20e65b 193 Pfam PF04993 TfoX N-terminal domain 9 98 5.3E-23 T 12-10-2018 IPR007076 TfoX, N-terminal K04M3_11980 167c585151b5b4cc6b46f34bac20e65b 193 Gene3D G3DSA:1.10.150.20 111 193 2.9E-15 T 12-10-2018 K04M3_11980 167c585151b5b4cc6b46f34bac20e65b 193 PIRSF PIRSF028788 7 193 1.4E-33 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type K04M3_11980 167c585151b5b4cc6b46f34bac20e65b 193 Gene3D G3DSA:3.30.1460.30 3 100 2.9E-17 T 12-10-2018 K04M3_11980 167c585151b5b4cc6b46f34bac20e65b 193 Pfam PF04994 TfoX C-terminal domain 112 190 4.6E-26 T 12-10-2018 IPR007077 TfoX, C-terminal K04M3_11980 167c585151b5b4cc6b46f34bac20e65b 193 SUPERFAMILY SSF159894 4 101 2.62E-26 T 12-10-2018 K04M3_06270 6594408f41bc732eaeb3dee604f6aeb4 554 PIRSF PIRSF003128 1 554 8.1E-162 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 K04M3_06270 6594408f41bc732eaeb3dee604f6aeb4 554 SUPERFAMILY SSF52540 1 508 6.21E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_06270 6594408f41bc732eaeb3dee604f6aeb4 554 Gene3D G3DSA:3.40.50.300 1 208 4.7E-43 T 12-10-2018 K04M3_06270 6594408f41bc732eaeb3dee604f6aeb4 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 508 2.4E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal K04M3_06270 6594408f41bc732eaeb3dee604f6aeb4 554 Gene3D G3DSA:3.40.50.300 245 553 3.1E-51 T 12-10-2018 K04M3_06270 6594408f41bc732eaeb3dee604f6aeb4 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 8.3E-172 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 K04M3_24880 c45cb3113b4dd2259007c0a6cd351652 367 Pfam PF03562 MltA specific insert domain 71 251 1.6E-37 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 K04M3_24880 c45cb3113b4dd2259007c0a6cd351652 367 SUPERFAMILY SSF50685 22 350 4.19E-101 T 12-10-2018 IPR036908 RlpA-like domain superfamily K04M3_24880 c45cb3113b4dd2259007c0a6cd351652 367 Gene3D G3DSA:2.40.240.50 119 257 2.0E-133 T 12-10-2018 K04M3_24880 c45cb3113b4dd2259007c0a6cd351652 367 SMART SM00925 119 252 1.7E-65 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 K04M3_24880 c45cb3113b4dd2259007c0a6cd351652 367 Gene3D G3DSA:2.40.40.10 51 348 2.0E-133 T 12-10-2018 IPR036908 RlpA-like domain superfamily K04M3_24880 c45cb3113b4dd2259007c0a6cd351652 367 Pfam PF06725 3D domain 272 348 5.2E-21 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 K04M3_01460 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 K04M3_01460 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_01460 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 K04M3_01460 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_01460 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 K04M3_01460 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 6.2E-30 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 Gene3D G3DSA:1.10.443.10 204 381 1.6E-16 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 Gene3D G3DSA:1.10.150.130 96 196 4.7E-13 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 Pfam PF00589 Phage integrase family 211 365 1.4E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 Pfam PF13356 Arm DNA-binding domain 3 85 4.9E-10 T 12-10-2018 IPR025166 Integrase, DNA-binding domain K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 SUPERFAMILY SSF56349 95 374 1.44E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 96 149 1.5E-5 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 K04M3_12580 7ce34ccfd0080a4779aaad39991d34ea 405 Gene3D G3DSA:3.30.160.390 1 95 4.0E-16 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily K04M3_00870 49fa648b1a72fe552be1034fd545f065 544 Pfam PF03109 ABC1 family 112 230 9.0E-36 T 12-10-2018 IPR004147 UbiB domain K04M3_00870 49fa648b1a72fe552be1034fd545f065 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.517 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 K04M3_00870 49fa648b1a72fe552be1034fd545f065 544 SUPERFAMILY SSF56112 94 436 3.41E-46 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_00870 49fa648b1a72fe552be1034fd545f065 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 8.9E-176 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 SMART SM00448 3 111 1.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 Gene3D G3DSA:3.40.50.2300 1 120 7.7E-29 T 12-10-2018 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 1.6E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 SUPERFAMILY SSF52172 4 118 1.11E-27 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 SUPERFAMILY SSF46894 124 218 1.9E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 SMART SM00862 147 218 1.4E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 Pfam PF00072 Response regulator receiver domain 6 112 5.7E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_40580 4a1569b7a91b27cc753200ef06ad259e 220 Gene3D G3DSA:1.10.10.10 125 220 1.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 Gene3D G3DSA:3.30.1330.10 7 171 2.3E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 1.2E-40 T 12-10-2018 IPR010918 PurM-like, C-terminal domain K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.824 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 Gene3D G3DSA:3.90.650.10 172 346 4.4E-73 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.6E-151 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 9.2E-16 T 12-10-2018 IPR016188 PurM-like, N-terminal domain K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 SUPERFAMILY SSF55326 8 171 2.54E-54 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily K04M3_23630 cf110edf186f92f66016ca4ee01cf9d0 346 SUPERFAMILY SSF56042 172 341 3.74E-62 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily K04M3_14100 3a46163a017cd3c22936e1f2b1124e9a 440 SUPERFAMILY SSF141868 206 437 5.49E-64 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_14100 3a46163a017cd3c22936e1f2b1124e9a 440 SMART SM00052 198 436 1.4E-65 T 12-10-2018 IPR001633 EAL domain K04M3_14100 3a46163a017cd3c22936e1f2b1124e9a 440 Pfam PF00563 EAL domain 208 431 3.3E-53 T 12-10-2018 IPR001633 EAL domain K04M3_14100 3a46163a017cd3c22936e1f2b1124e9a 440 Gene3D G3DSA:3.20.20.450 201 439 4.0E-64 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_14980 554ef12a9a7307f9de4f6cb403601425 514 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 501 8.3E-229 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted K04M3_14980 554ef12a9a7307f9de4f6cb403601425 514 SUPERFAMILY SSF51998 24 464 3.36E-94 T 12-10-2018 K04M3_14980 554ef12a9a7307f9de4f6cb403601425 514 PIRSF PIRSF028991 4 513 1.5E-280 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted K04M3_14980 554ef12a9a7307f9de4f6cb403601425 514 Pfam PF11230 Protein of unknown function (DUF3029) 20 501 1.2E-224 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:3.40.50.300 213 408 1.8E-60 T 12-10-2018 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 4.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00956 414 517 1.7E-49 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:1.10.150.80 526 610 4.2E-28 T 12-10-2018 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00490 253 334 9.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SUPERFAMILY SSF52540 211 458 1.42E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:1.10.10.10 409 519 5.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.9E-187 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SUPERFAMILY SSF52540 17 202 8.88E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 6.6E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.9E-251 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF09382 RQC domain 409 517 2.6E-35 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:3.40.50.300 7 211 1.3E-80 T 12-10-2018 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF16124 RecQ zinc-binding 346 407 4.6E-18 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00341 533 611 2.1E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 K04M3_31530 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00487 25 221 1.1E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_45310 4145b94bddeb298ed785615bca0977d4 365 Pfam PF13407 Periplasmic binding protein domain 69 324 1.0E-13 T 12-10-2018 IPR025997 Periplasmic binding protein K04M3_45310 4145b94bddeb298ed785615bca0977d4 365 SUPERFAMILY SSF53822 27 364 1.73E-85 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_45310 4145b94bddeb298ed785615bca0977d4 365 Gene3D G3DSA:3.40.50.2300 33 363 5.5E-150 T 12-10-2018 K04M3_45310 4145b94bddeb298ed785615bca0977d4 365 Gene3D G3DSA:3.40.50.2300 180 359 5.5E-150 T 12-10-2018 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Gene3D G3DSA:2.10.10.20 993 1052 6.9E-18 T 12-10-2018 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Pfam PF14600 Cellulose-binding domain 998 1050 7.3E-15 T 12-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SUPERFAMILY SSF51055 995 1052 8.44E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SUPERFAMILY SSF51055 22 86 6.67E-18 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Gene3D G3DSA:2.10.10.20 16 88 5.3E-17 T 12-10-2018 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SMART SM00636 322 782 3.2E-120 T 12-10-2018 IPR011583 Chitinase II GO:0008061 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Gene3D G3DSA:2.60.40.10 98 190 2.5E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Gene3D G3DSA:3.20.20.80 304 651 7.2E-80 T 12-10-2018 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Pfam PF00704 Glycosyl hydrolases family 18 323 782 1.9E-85 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SUPERFAMILY SSF54556 629 752 1.31E-14 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Gene3D G3DSA:2.60.40.10 197 286 3.7E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SUPERFAMILY SSF51445 316 786 4.95E-74 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Pfam PF06483 Chitinase C 810 975 2.9E-72 T 12-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 Gene3D G3DSA:3.20.20.80 675 819 9.4E-8 T 12-10-2018 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SMART SM00495 1008 1050 9.0E-8 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_42130 0e18b0da80e7fb9d1407127bf5810fee 1053 SMART SM00495 37 82 7.2E-15 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_13070 5eeef0f61e7799441cc6d18fac6da711 268 Pfam PF02654 Cobalamin-5-phosphate synthase 25 259 3.8E-53 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 K04M3_13070 5eeef0f61e7799441cc6d18fac6da711 268 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 268 47.263 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 K04M3_13070 5eeef0f61e7799441cc6d18fac6da711 268 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 25 260 2.3E-36 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 SMART SM00849 13 213 5.5E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 Pfam PF00753 Metallo-beta-lactamase superfamily 16 179 9.1E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 SMART SM01027 233 363 9.0E-56 T 12-10-2018 IPR022712 Beta-Casp domain K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 Gene3D G3DSA:3.60.15.10 6 424 2.1E-135 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 Pfam PF10996 Beta-Casp domain 233 363 4.8E-29 T 12-10-2018 IPR022712 Beta-Casp domain K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 SUPERFAMILY SSF56281 1 432 2.88E-125 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 377 437 1.3E-13 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain K04M3_02120 82b7c07acec79745566b0f69ac0e343b 438 Gene3D G3DSA:3.40.50.10890 201 389 2.1E-135 T 12-10-2018 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 Pfam PF02311 AraC-like ligand binding domain 15 133 2.6E-20 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 SUPERFAMILY SSF46689 167 215 2.33E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 SMART SM00342 182 264 3.5E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 Gene3D G3DSA:1.10.10.60 166 265 2.1E-26 T 12-10-2018 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 Pfam PF12833 Helix-turn-helix domain 192 264 1.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 2.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 2.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 SUPERFAMILY SSF46689 218 264 1.12E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_31550 b4fd4efd6a30dc15968a110d2e1c774d 265 SUPERFAMILY SSF51215 23 133 7.45E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Pfam PF05593 RHS Repeat 954 985 7.4E-5 T 12-10-2018 IPR031325 RHS repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Pfam PF05593 RHS Repeat 886 913 1.1E-5 T 12-10-2018 IPR031325 RHS repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Pfam PF05593 RHS Repeat 422 458 6.9E-8 T 12-10-2018 IPR031325 RHS repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Pfam PF03527 RHS protein 1029 1062 9.0E-13 T 12-10-2018 IPR001826 RHS protein K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1057 1130 4.5E-27 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 501 1.7E-5 T 12-10-2018 IPR006530 YD repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 955 991 2.7E-6 T 12-10-2018 IPR006530 YD repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 313 355 0.0032 T 12-10-2018 IPR006530 YD repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 8.9E-4 T 12-10-2018 IPR006530 YD repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 451 9.7E-6 T 12-10-2018 IPR006530 YD repeat K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Gene3D G3DSA:2.180.10.10 689 1131 1.2E-40 T 12-10-2018 K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 PRINTS PR00394 RHS protein signature 1023 1043 1.1E-10 T 12-10-2018 IPR001826 RHS protein K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 PRINTS PR00394 RHS protein signature 1099 1118 1.1E-10 T 12-10-2018 IPR001826 RHS protein K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 PRINTS PR00394 RHS protein signature 1076 1096 1.1E-10 T 12-10-2018 IPR001826 RHS protein K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Gene3D G3DSA:3.90.930.1 415 516 2.0E-7 T 12-10-2018 K04M3_15940 ff675235dd07422d2dc7b4981e6533f0 1459 Gene3D G3DSA:3.90.930.1 517 636 9.0E-6 T 12-10-2018 K04M3_32510 4bdb2e91bf70e4cf4aa389bf0c17d2d0 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 5.3E-10 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_32510 4bdb2e91bf70e4cf4aa389bf0c17d2d0 484 SUPERFAMILY SSF55604 8 81 4.32E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_32510 4bdb2e91bf70e4cf4aa389bf0c17d2d0 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_32510 4bdb2e91bf70e4cf4aa389bf0c17d2d0 484 Gene3D G3DSA:3.30.1360.60 3 79 6.1E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_32510 4bdb2e91bf70e4cf4aa389bf0c17d2d0 484 Pfam PF02378 Phosphotransferase system, EIIC 130 411 1.8E-31 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_23220 28b2aa288fd2b3fe35de4b5c4a69890d 327 SUPERFAMILY SSF102114 15 288 6.28E-19 T 12-10-2018 K04M3_23220 28b2aa288fd2b3fe35de4b5c4a69890d 327 Gene3D G3DSA:3.20.20.70 9 279 2.8E-16 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_23220 28b2aa288fd2b3fe35de4b5c4a69890d 327 Pfam PF04055 Radical SAM superfamily 22 124 8.3E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_48640 96922c7af43b4dde7c02906ac446ae2e 156 SUPERFAMILY SSF55729 1 150 3.38E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_48640 96922c7af43b4dde7c02906ac446ae2e 156 Gene3D G3DSA:3.40.630.30 4 156 1.9E-35 T 12-10-2018 K04M3_48640 96922c7af43b4dde7c02906ac446ae2e 156 Pfam PF00583 Acetyltransferase (GNAT) family 36 145 6.0E-16 T 12-10-2018 IPR000182 GNAT domain K04M3_31030 39aa39295abea19f435a4376550abf71 412 Pfam PF00448 SRP54-type protein, GTPase domain 209 408 2.3E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_31030 39aa39295abea19f435a4376550abf71 412 SMART SM00382 207 399 1.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_31030 39aa39295abea19f435a4376550abf71 412 Gene3D G3DSA:3.40.50.300 205 397 2.6E-117 T 12-10-2018 K04M3_31030 39aa39295abea19f435a4376550abf71 412 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 382 395 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_31030 39aa39295abea19f435a4376550abf71 412 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 136 408 2.5E-115 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 K04M3_31030 39aa39295abea19f435a4376550abf71 412 Pfam PF02881 SRP54-type protein, helical bundle domain 128 189 1.1E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_31030 39aa39295abea19f435a4376550abf71 412 SMART SM00963 113 193 4.9E-27 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_31030 39aa39295abea19f435a4376550abf71 412 Gene3D G3DSA:1.20.120.140 110 407 2.6E-117 T 12-10-2018 K04M3_31030 39aa39295abea19f435a4376550abf71 412 SUPERFAMILY SSF47364 108 187 1.31E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 K04M3_31030 39aa39295abea19f435a4376550abf71 412 SUPERFAMILY SSF52540 206 409 6.2E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31030 39aa39295abea19f435a4376550abf71 412 SMART SM00962 208 409 1.3E-123 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_31030 39aa39295abea19f435a4376550abf71 412 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 136 409 65.027 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 Pfam PF01817 Chorismate mutase type II 9 87 2.1E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 Pfam PF02153 Prephenate dehydrogenase 136 345 1.7E-30 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.9E-42 T 12-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 Gene3D G3DSA:3.40.50.720 81 247 1.4E-43 T 12-10-2018 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 SMART SM00830 9 89 3.2E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 PIRSF PIRSF001499 1 374 4.3E-183 T 12-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 SUPERFAMILY SSF51735 91 237 7.48E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 Gene3D G3DSA:1.10.3660.10 248 373 6.7E-48 T 12-10-2018 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 SUPERFAMILY SSF48600 4 88 6.78E-24 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 Gene3D G3DSA:1.20.59.10 1 80 2.7E-17 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 K04M3_05150 9450293b5a8a396e14db6fa05cd98777 375 SUPERFAMILY SSF48179 241 366 7.71E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_25700 df44405d5e8b0a0cdeb8bd15f8447a8d 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_25700 df44405d5e8b0a0cdeb8bd15f8447a8d 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 272 3.0E-102 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 K04M3_25700 df44405d5e8b0a0cdeb8bd15f8447a8d 277 SUPERFAMILY SSF51717 3 275 1.96E-105 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_25700 df44405d5e8b0a0cdeb8bd15f8447a8d 277 Gene3D G3DSA:3.20.20.20 2 276 6.6E-111 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_25700 df44405d5e8b0a0cdeb8bd15f8447a8d 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_25700 df44405d5e8b0a0cdeb8bd15f8447a8d 277 Pfam PF00809 Pterin binding enzyme 19 258 2.8E-88 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 SUPERFAMILY SSF54373 213 310 8.24E-33 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 SUPERFAMILY SSF51905 3 452 1.39E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 Gene3D G3DSA:3.30.9.90 80 454 8.8E-182 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 Gene3D G3DSA:3.50.50.60 7 386 8.8E-182 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 Gene3D G3DSA:3.30.70.20 455 548 1.4E-35 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 3.4E-6 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.4E-6 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 3.6E-47 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 SUPERFAMILY SSF54862 454 553 3.14E-27 T 12-10-2018 K04M3_38550 681388bcf3b29f1de6fcaac7f9e67216 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 1.1E-6 T 12-10-2018 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 Pfam PF00664 ABC transporter transmembrane region 176 442 3.2E-35 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 Gene3D G3DSA:3.40.50.300 490 711 1.9E-68 T 12-10-2018 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 Gene3D G3DSA:1.20.1560.10 158 473 6.1E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 SMART SM00382 521 703 6.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 SUPERFAMILY SSF52540 494 706 8.3E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 ProSitePatterns PS00211 ABC transporters family signature. 631 645 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 Gene3D G3DSA:3.90.70.10 6 155 4.5E-40 T 12-10-2018 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 Pfam PF03412 Peptidase C39 family 18 146 8.6E-34 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 Pfam PF00005 ABC transporter 512 659 3.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_23200 b6cd2f1fb5f44891e92e31c0bf3bf77f 711 SUPERFAMILY SSF90123 161 467 1.16E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 3.8E-9 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 3.8E-9 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 3.8E-9 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 3.8E-9 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 SUPERFAMILY SSF51905 14 199 5.89E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 SUPERFAMILY SSF51905 159 319 1.17E-23 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Gene3D G3DSA:3.30.413.10 634 794 1.3E-34 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 1.8E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 682 698 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Gene3D G3DSA:1.10.10.1100 425 480 2.4E-11 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00397 Sirohaem Fe-binding site signature 639 657 8.7E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00397 Sirohaem Fe-binding site signature 682 700 8.7E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PIRSF PIRSF037149 9 838 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Gene3D G3DSA:3.50.50.60 17 292 1.2E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.8E-17 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 4.8E-17 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.8E-17 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.8E-17 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.8E-17 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 624 1.6E-11 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Gene3D G3DSA:3.50.50.60 120 255 1.2E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 294 1.5E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 SUPERFAMILY SSF55124 505 644 5.23E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 SUPERFAMILY SSF56014 636 810 1.26E-49 T 12-10-2018 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 16 803 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 K04M3_38870 0513d31de6b1312e701040421d58cdd8 839 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 635 760 1.1E-18 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 Gene3D G3DSA:1.10.530.10 309 470 1.0E-33 T 12-10-2018 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 SUPERFAMILY SSF53850 48 287 9.06E-33 T 12-10-2018 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 12 488 48.73 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 Gene3D G3DSA:3.40.190.10 41 283 2.1E-72 T 12-10-2018 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 329 357 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 Pfam PF01464 Transglycosylase SLT domain 318 421 2.6E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 SUPERFAMILY SSF53955 265 470 1.22E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 SMART SM00062 47 288 5.4E-26 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 Gene3D G3DSA:3.40.190.10 132 244 2.1E-72 T 12-10-2018 K04M3_06420 ccbec5c286dc789e355b740a0efccae5 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 287 1.6E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_01310 f2bb8ee44520c7d6d9e9d76efe1a79d6 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_01310 f2bb8ee44520c7d6d9e9d76efe1a79d6 189 Pfam PF00293 NUDIX domain 46 157 8.7E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_01310 f2bb8ee44520c7d6d9e9d76efe1a79d6 189 Gene3D G3DSA:3.90.79.10 7 189 8.8E-50 T 12-10-2018 K04M3_01310 f2bb8ee44520c7d6d9e9d76efe1a79d6 189 SUPERFAMILY SSF55811 4 181 3.79E-41 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 Pfam PF00797 N-acetyltransferase 22 258 4.4E-69 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 3.3E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 3.3E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 3.3E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 Gene3D G3DSA:2.40.128.150 86 183 2.5E-69 T 12-10-2018 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 Gene3D G3DSA:3.30.2140.10 6 253 2.5E-69 T 12-10-2018 K04M3_48960 d52ae332383b682bfd671fdf2d60b54f 268 SUPERFAMILY SSF54001 2 257 3.14E-72 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily K04M3_23690 eee7b9c1b188f80d8b0fbd17f220ea93 591 Pfam PF00916 Sulfate permease family 28 393 2.4E-83 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 K04M3_23690 eee7b9c1b188f80d8b0fbd17f220ea93 591 Pfam PF01740 STAS domain 451 543 2.7E-16 T 12-10-2018 IPR002645 STAS domain K04M3_23690 eee7b9c1b188f80d8b0fbd17f220ea93 591 Gene3D G3DSA:3.30.750.24 439 558 3.0E-20 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_23690 eee7b9c1b188f80d8b0fbd17f220ea93 591 SUPERFAMILY SSF52091 450 540 4.51E-13 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_48940 f33242cb90e526057a4c9f08c59e6187 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 5.9E-33 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting K04M3_48940 f33242cb90e526057a4c9f08c59e6187 257 SUPERFAMILY SSF63380 6 117 3.4E-11 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_48940 f33242cb90e526057a4c9f08c59e6187 257 Pfam PF04954 Siderophore-interacting protein 127 239 6.8E-32 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain K04M3_48940 f33242cb90e526057a4c9f08c59e6187 257 Gene3D G3DSA:2.40.30.10 1 119 1.2E-32 T 12-10-2018 K04M3_48940 f33242cb90e526057a4c9f08c59e6187 257 Gene3D G3DSA:3.40.50.80 122 257 1.9E-45 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.181 T 12-10-2018 IPR026593 Protein translocase subunit SecY K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 SUPERFAMILY SSF103491 15 425 1.44E-130 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.1E-134 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 Gene3D G3DSA:1.10.3370.10 10 430 9.8E-160 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 Pfam PF00344 SecY translocase 76 418 1.8E-117 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PIRSF PIRSF004557 10 442 1.2E-121 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 12-10-2018 K04M3_02830 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 12-10-2018 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 Gene3D G3DSA:3.40.50.150 43 292 2.5E-27 T 12-10-2018 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 SUPERFAMILY SSF53335 4 283 3.32E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_52170 9869600decea54055ddd52d509d1c31b 477 Pfam PF02384 N-6 DNA Methylase 41 271 1.9E-8 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 164 170 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 48 64 1.1E-11 T 12-10-2018 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 216 1.1E-11 T 12-10-2018 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 161 173 1.1E-11 T 12-10-2018 K04M3_52170 9869600decea54055ddd52d509d1c31b 477 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 76 90 1.1E-11 T 12-10-2018 K04M3_28820 4d1856fd7c16000adea72574f5f26707 503 SUPERFAMILY SSF52540 15 221 2.51E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28820 4d1856fd7c16000adea72574f5f26707 503 Gene3D G3DSA:3.30.70.1070 403 500 7.0E-26 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_28820 4d1856fd7c16000adea72574f5f26707 503 Pfam PF13401 AAA domain 27 128 3.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_28820 4d1856fd7c16000adea72574f5f26707 503 Gene3D G3DSA:3.40.50.300 10 159 2.1E-5 T 12-10-2018 K04M3_28820 4d1856fd7c16000adea72574f5f26707 503 Pfam PF05036 Sporulation related domain 416 489 1.4E-6 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_17100 243b42b4e678286e663c5bdd5945fc41 323 PIRSF PIRSF017082 2 323 7.0E-85 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 K04M3_17100 243b42b4e678286e663c5bdd5945fc41 323 SUPERFAMILY SSF53850 105 289 1.3E-9 T 12-10-2018 K04M3_17100 243b42b4e678286e663c5bdd5945fc41 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 4.0E-28 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 K04M3_17100 243b42b4e678286e663c5bdd5945fc41 323 Gene3D G3DSA:3.40.190.10 123 249 8.7E-60 T 12-10-2018 K04M3_17100 243b42b4e678286e663c5bdd5945fc41 323 Gene3D G3DSA:3.40.190.150 31 314 8.7E-60 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Gene3D G3DSA:3.40.50.670 390 621 2.8E-93 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 SUPERFAMILY SSF54211 217 382 3.22E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 SUPERFAMILY SSF56719 388 619 6.02E-80 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.1E-26 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF01751 Toprim domain 413 521 5.6E-12 T 12-10-2018 IPR006171 TOPRIM domain K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Gene3D G3DSA:3.30.565.10 2 215 2.4E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 SMART SM00433 34 622 5.1E-218 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.1E-123 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 SMART SM00387 27 173 3.4E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Gene3D G3DSA:3.30.230.10 216 389 5.1E-58 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.952 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF00204 DNA gyrase B 218 384 2.1E-42 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 SUPERFAMILY SSF55874 5 215 2.01E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.5E-58 T 12-10-2018 K04M3_04020 15da716a25e6a6931f4d27b36f9a3be2 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.5E-58 T 12-10-2018 K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 SUPERFAMILY SSF46785 1 81 8.41E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 Pfam PF03466 LysR substrate binding domain 124 277 1.7E-8 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 SUPERFAMILY SSF53850 91 279 1.45E-14 T 12-10-2018 K04M3_49280 118093e40fd57f2eadada7b46f5f3ea0 297 Gene3D G3DSA:1.10.10.10 1 83 1.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 Gene3D G3DSA:3.40.50.1980 133 304 9.4E-46 T 12-10-2018 K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 64 82 5.9E-6 T 12-10-2018 K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 5.9E-6 T 12-10-2018 K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 95 110 5.9E-6 T 12-10-2018 K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 SUPERFAMILY SSF53807 42 302 3.89E-54 T 12-10-2018 K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 Gene3D G3DSA:3.40.50.1980 32 131 6.2E-28 T 12-10-2018 K04M3_35510 f21ec0b7e3339ef399004c3f8b4f1859 309 Pfam PF01497 Periplasmic binding protein 47 276 3.4E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Gene3D G3DSA:3.40.50.300 361 575 9.4E-49 T 12-10-2018 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 SUPERFAMILY SSF52540 177 512 8.1E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 SUPERFAMILY SSF52540 577 877 3.58E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 SMART SM00382 215 360 3.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 SMART SM00382 628 787 8.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Gene3D G3DSA:3.40.50.300 581 796 1.3E-69 T 12-10-2018 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 SUPERFAMILY SSF81923 20 127 1.8E-11 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Pfam PF07724 AAA domain (Cdc48 subfamily) 628 792 1.1E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 17 880 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Gene3D G3DSA:1.10.8.60 799 892 5.2E-14 T 12-10-2018 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Gene3D G3DSA:1.10.1780.10 1 162 1.1E-36 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 SMART SM01086 799 889 8.3E-12 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 799 874 2.3E-13 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 662 680 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Gene3D G3DSA:3.40.50.300 164 359 9.9E-63 T 12-10-2018 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 739 753 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 724 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 632 650 2.5E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_44530 43487ab26bc0c3f238fd59536f81de4f 894 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 350 6.4E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_26760 df290d59073e681b9092e26cd92d400f 546 SUPERFAMILY SSF52317 289 538 4.44E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_26760 df290d59073e681b9092e26cd92d400f 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.3E-124 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 K04M3_26760 df290d59073e681b9092e26cd92d400f 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.0E-62 T 12-10-2018 IPR017926 Glutamine amidotransferase K04M3_26760 df290d59073e681b9092e26cd92d400f 546 SUPERFAMILY SSF52540 3 269 3.64E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26760 df290d59073e681b9092e26cd92d400f 546 Gene3D G3DSA:3.40.50.300 1 285 3.6E-133 T 12-10-2018 K04M3_26760 df290d59073e681b9092e26cd92d400f 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.4E-260 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 K04M3_26760 df290d59073e681b9092e26cd92d400f 546 Gene3D G3DSA:3.40.50.880 286 543 7.6E-106 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_26760 df290d59073e681b9092e26cd92d400f 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.205 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Gene3D G3DSA:1.10.4050.10 3 112 1.9E-12 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Gene3D G3DSA:1.20.120.330 815 947 7.5E-42 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 4.4E-97 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.8E-92 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Pfam PF08335 GlnD PII-uridylyltransferase 846 913 7.5E-6 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 1.9E-44 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 SUPERFAMILY SSF81301 24 289 1.13E-86 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Gene3D G3DSA:1.20.120.1510 451 564 3.2E-32 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 SUPERFAMILY SSF81301 528 815 1.93E-87 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 SUPERFAMILY SSF81593 290 439 8.63E-42 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 SUPERFAMILY SSF81593 818 946 7.85E-33 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Gene3D G3DSA:1.20.120.330 288 443 1.2E-54 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.082 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Gene3D G3DSA:3.30.460.100 565 814 6.8E-92 T 12-10-2018 K04M3_03950 8ae8582fa95958bc6eff57d5494e6331 947 Gene3D G3DSA:3.30.460.10 115 287 4.5E-65 T 12-10-2018 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 SUPERFAMILY SSF51735 1 173 1.02E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_31140 a6e4579504463b12ca79a4b754349461 333 SUPERFAMILY SSF55347 152 314 4.17E-64 T 12-10-2018 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.1E-29 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.9E-60 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 PIRSF PIRSF000149 1 331 5.1E-115 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 1.1E-30 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 9.3E-120 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 Gene3D G3DSA:3.40.50.720 4 327 6.4E-127 T 12-10-2018 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 SMART SM00846 3 152 2.7E-69 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_31140 a6e4579504463b12ca79a4b754349461 333 Gene3D G3DSA:3.30.360.10 151 315 6.4E-127 T 12-10-2018 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 SUPERFAMILY SSF54919 1 140 5.24E-61 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.944 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 Gene3D G3DSA:3.30.70.141 1 141 8.0E-60 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.7E-58 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 SMART SM00562 3 140 1.1E-89 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.7E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.7E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.7E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.7E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_05790 0c3dda094e45dd4f24ce7c8fac0e8d1b 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.7E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 Pfam PF13174 Tetratricopeptide repeat 208 240 8.9E-8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 Gene3D G3DSA:1.20.5.110 40 118 2.0E-21 T 12-10-2018 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 Gene3D G3DSA:1.25.40.10 133 250 1.0E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 250 3.1E-39 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 250 17.463 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 Pfam PF16331 TolA binding protein trimerisation 42 116 1.6E-24 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 SMART SM00028 207 240 0.27 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 SMART SM00028 171 204 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 Pfam PF13432 Tetratricopeptide repeat 145 196 6.9E-7 T 12-10-2018 K04M3_10490 c64614654bea96fcb5f4adaf5d283166 250 SUPERFAMILY SSF48452 135 245 1.23E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_26850 43634dd4254772181960bb275cf1f381 320 SUPERFAMILY SSF52540 29 224 8.64E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26850 43634dd4254772181960bb275cf1f381 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.5E-110 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26850 43634dd4254772181960bb275cf1f381 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.738 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26850 43634dd4254772181960bb275cf1f381 320 Gene3D G3DSA:3.40.50.300 20 202 1.1E-51 T 12-10-2018 K04M3_26850 43634dd4254772181960bb275cf1f381 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_26850 43634dd4254772181960bb275cf1f381 320 Gene3D G3DSA:3.30.300.20 204 318 1.7E-42 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_26850 43634dd4254772181960bb275cf1f381 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_26850 43634dd4254772181960bb275cf1f381 320 SUPERFAMILY SSF54814 200 316 2.75E-41 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 K04M3_26850 43634dd4254772181960bb275cf1f381 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 3.2E-39 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-68 T 12-10-2018 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 SUPERFAMILY SSF52304 4 146 3.4E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 Gene3D G3DSA:3.40.50.9100 1 149 8.0E-67 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 4.1E-64 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 Pfam PF01220 Dehydroquinase class II 6 142 6.4E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 PIRSF PIRSF001399 3 149 8.8E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_30200 00e9255d0ac9ff81a2351ede06772a2a 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.826 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF04545 Sigma-70, region 4 229 279 7.7E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 SUPERFAMILY SSF88659 198 281 1.68E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 Gene3D G3DSA:1.20.120.1810 11 122 6.7E-27 T 12-10-2018 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.146 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 Gene3D G3DSA:1.20.140.160 131 283 1.3E-14 T 12-10-2018 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.0E-9 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 4.0E-126 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 3.1E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 SUPERFAMILY SSF88946 11 122 5.97E-40 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_31000 375c91d2c596b346dce1d25cc27a387f 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_21040 2af826b75f01eafed1945fa86b30ed21 210 SUPERFAMILY SSF52540 2 208 2.1E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21040 2af826b75f01eafed1945fa86b30ed21 210 Pfam PF02223 Thymidylate kinase 9 199 1.4E-57 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 K04M3_21040 2af826b75f01eafed1945fa86b30ed21 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.2E-61 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 K04M3_21040 2af826b75f01eafed1945fa86b30ed21 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 K04M3_21040 2af826b75f01eafed1945fa86b30ed21 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.673 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 K04M3_21040 2af826b75f01eafed1945fa86b30ed21 210 Gene3D G3DSA:3.40.50.300 4 209 3.8E-62 T 12-10-2018 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Pfam PF00072 Response regulator receiver domain 601 712 4.5E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 SUPERFAMILY SSF52172 596 723 8.97E-27 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Gene3D G3DSA:3.30.565.10 416 579 1.3E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 SUPERFAMILY SSF55874 406 577 1.44E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 SMART SM00388 352 417 7.7E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Gene3D G3DSA:1.10.287.130 320 415 1.0E-25 T 12-10-2018 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 SMART SM00448 598 712 8.4E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 3.0E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 SUPERFAMILY SSF47384 338 418 5.1E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 6.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 6.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 6.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 6.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 577 5.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Gene3D G3DSA:3.40.50.2300 586 718 4.0E-30 T 12-10-2018 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 Gene3D G3DSA:3.30.450.20 30 204 2.1E-21 T 12-10-2018 K04M3_10560 b0dc6fac9c1d3d2c86573dd15549d534 806 SMART SM00387 464 579 6.7E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_01960 07220f45bac2a7aeaabc279ad7b641d4 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 312 46.322 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 K04M3_01960 07220f45bac2a7aeaabc279ad7b641d4 313 Gene3D G3DSA:3.40.50.720 3 307 1.5E-115 T 12-10-2018 K04M3_01960 07220f45bac2a7aeaabc279ad7b641d4 313 SUPERFAMILY SSF51735 1 308 3.92E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_01960 07220f45bac2a7aeaabc279ad7b641d4 313 Gene3D G3DSA:3.90.25.10 173 295 1.5E-115 T 12-10-2018 K04M3_01960 07220f45bac2a7aeaabc279ad7b641d4 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 1.6E-44 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 K04M3_01960 07220f45bac2a7aeaabc279ad7b641d4 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 2.9E-126 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 K04M3_22350 b54b27a8268521fad77e16148cd8cd02 174 Gene3D G3DSA:3.40.50.360 1 174 1.2E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_22350 b54b27a8268521fad77e16148cd8cd02 174 Pfam PF03358 NADPH-dependent FMN reductase 1 138 1.2E-26 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 K04M3_22350 b54b27a8268521fad77e16148cd8cd02 174 SUPERFAMILY SSF52218 1 170 1.21E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_14200 44c376662ba307345beca5f0dcf29c14 309 SUPERFAMILY SSF53850 24 274 3.23E-22 T 12-10-2018 K04M3_14200 44c376662ba307345beca5f0dcf29c14 309 Gene3D G3DSA:3.40.190.10 31 271 2.3E-27 T 12-10-2018 K04M3_14200 44c376662ba307345beca5f0dcf29c14 309 Gene3D G3DSA:3.40.190.10 116 240 2.3E-27 T 12-10-2018 K04M3_14200 44c376662ba307345beca5f0dcf29c14 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 1.4E-51 T 12-10-2018 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 SUPERFAMILY SSF56322 29 533 4.71E-158 T 12-10-2018 IPR005801 ADC synthase GO:0009058 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 Gene3D G3DSA:3.60.120.10 23 537 6.4E-186 T 12-10-2018 IPR005801 ADC synthase GO:0009058 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 Pfam PF04715 Anthranilate synthase component I, N terminal region 40 213 2.9E-14 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 PRINTS PR00095 Anthranilate synthase component I signature 384 397 1.4E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 PRINTS PR00095 Anthranilate synthase component I signature 370 383 1.4E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 PRINTS PR00095 Anthranilate synthase component I signature 464 478 1.4E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 PRINTS PR00095 Anthranilate synthase component I signature 479 493 1.4E-22 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 PIRSF PIRSF001373 19 537 6.5E-261 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 Pfam PF00425 chorismate binding enzyme 262 522 1.5E-84 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal K04M3_20180 5cdd5c2fb97eab39faa729a1bf0f86ea 537 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 38 534 8.1E-226 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_24220 b8e084133566f96a096f03bb6059df30 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.6E-36 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 K04M3_24220 b8e084133566f96a096f03bb6059df30 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.93 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 K04M3_24220 b8e084133566f96a096f03bb6059df30 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 6.0E-27 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 K04M3_42610 db656ae1643cd1618ae5f45dcc61c65a 178 SUPERFAMILY SSF52540 3 173 1.89E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_42610 db656ae1643cd1618ae5f45dcc61c65a 178 Pfam PF13521 AAA domain 5 168 1.8E-40 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain K04M3_42610 db656ae1643cd1618ae5f45dcc61c65a 178 Gene3D G3DSA:3.40.50.300 2 173 2.3E-7 T 12-10-2018 K04M3_29060 c0a7fcb6883057a1dd7846e996c421ce 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.001 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 K04M3_29060 c0a7fcb6883057a1dd7846e996c421ce 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.9E-59 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 K04M3_29060 c0a7fcb6883057a1dd7846e996c421ce 106 Gene3D G3DSA:1.10.140.10 2 105 1.2E-56 T 12-10-2018 IPR023453 Methionine repressor MetJ domain superfamily K04M3_29060 c0a7fcb6883057a1dd7846e996c421ce 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 K04M3_29060 c0a7fcb6883057a1dd7846e996c421ce 106 SUPERFAMILY SSF47598 3 104 5.78E-57 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.4E-42 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 SMART SM01219 1 104 6.2E-55 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 Pfam PF01491 Frataxin-like domain 1 100 2.1E-29 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.402 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 Gene3D G3DSA:3.30.920.10 1 104 3.6E-38 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_31290 8fa53720c3b54b05cf149c2d3bbb73b2 104 SUPERFAMILY SSF55387 1 103 9.42E-39 T 12-10-2018 K04M3_25190 baf8bac3474cfe60c642c67789d74f76 317 Pfam PF01544 CorA-like Mg2+ transporter protein 30 305 9.2E-47 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 K04M3_25190 baf8bac3474cfe60c642c67789d74f76 317 Gene3D G3DSA:1.20.58.340 125 249 3.6E-28 T 12-10-2018 K04M3_25190 baf8bac3474cfe60c642c67789d74f76 317 Gene3D G3DSA:1.20.58.340 252 308 1.6E-10 T 12-10-2018 K04M3_25190 baf8bac3474cfe60c642c67789d74f76 317 SUPERFAMILY SSF143865 3 236 2.48E-25 T 12-10-2018 K04M3_25190 baf8bac3474cfe60c642c67789d74f76 317 SUPERFAMILY SSF144083 245 306 1.44E-14 T 12-10-2018 K04M3_25190 baf8bac3474cfe60c642c67789d74f76 317 Gene3D G3DSA:3.30.460.20 1 124 3.0E-45 T 12-10-2018 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 7.5E-174 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 172 185 7.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 377 389 7.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 298 311 7.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 5 16 7.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PRINTS PR00471 Acetate kinase family signature 202 223 7.4E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 188.284 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 SUPERFAMILY SSF53067 3 195 1.68E-64 T 12-10-2018 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 PIRSF PIRSF000722 1 397 1.6E-147 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 Gene3D G3DSA:3.30.420.40 195 397 4.4E-83 T 12-10-2018 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 Pfam PF00871 Acetokinase family 5 390 2.8E-167 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 SUPERFAMILY SSF53067 156 395 7.66E-85 T 12-10-2018 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 Gene3D G3DSA:3.30.420.40 2 194 5.2E-74 T 12-10-2018 K04M3_21390 410543532bab2fbb256b7b44604f956d 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 1.7E-71 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 29.947 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PIRSF PIRSF000513 4 263 7.7E-98 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 Gene3D G3DSA:3.40.1190.20 1 263 1.2E-90 T 12-10-2018 IPR029056 Ribokinase-like K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48570 e034a42f9761934f2d9b37fe57cecf63 263 SUPERFAMILY SSF53613 6 260 3.9E-61 T 12-10-2018 IPR029056 Ribokinase-like K04M3_03890 cd9843dc50fa332db7d38dfbd421bd66 241 SMART SM00287 58 124 6.8E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type K04M3_03890 cd9843dc50fa332db7d38dfbd421bd66 241 Gene3D G3DSA:2.30.30.40 69 124 5.1E-10 T 12-10-2018 K04M3_03890 cd9843dc50fa332db7d38dfbd421bd66 241 Pfam PF08239 Bacterial SH3 domain 71 120 6.6E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type K04M3_03890 cd9843dc50fa332db7d38dfbd421bd66 241 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 62 240 1.8E-52 T 12-10-2018 IPR016476 SH3 domain protein K04M3_03890 cd9843dc50fa332db7d38dfbd421bd66 241 PIRSF PIRSF006158 33 241 1.1E-69 T 12-10-2018 IPR016476 SH3 domain protein K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 Pfam PF00889 Elongation factor TS 71 261 1.1E-61 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 1.2E-103 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 Gene3D G3DSA:1.10.286.20 185 224 2.4E-22 T 12-10-2018 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 12-10-2018 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 SUPERFAMILY SSF54713 56 138 1.18E-18 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 77.559 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 SUPERFAMILY SSF54713 142 280 1.7E-46 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_23990 ab707560c26b40ef16c6b660894061bf 281 Gene3D G3DSA:3.30.479.20 57 140 6.6E-27 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PIRSF PIRSF001093 198 638 7.9E-95 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PIRSF PIRSF001093 114 201 350.0 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 2.8E-118 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_25940 db58969626b653a6d2653091a28157fb 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 1.9E-13 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal K04M3_25940 db58969626b653a6d2653091a28157fb 639 SUPERFAMILY SSF55545 126 259 3.74E-25 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 1.9E-49 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_25940 db58969626b653a6d2653091a28157fb 639 SUPERFAMILY SSF51445 260 620 2.95E-128 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_25940 db58969626b653a6d2653091a28157fb 639 Gene3D G3DSA:3.30.379.10 131 258 4.9E-20 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 K04M3_25940 db58969626b653a6d2653091a28157fb 639 Gene3D G3DSA:3.20.20.80 259 636 1.3E-134 T 12-10-2018 K04M3_37620 7e1140997c7d0819eed9b10eca9d973d 191 SUPERFAMILY SSF53335 5 186 1.2E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_37620 7e1140997c7d0819eed9b10eca9d973d 191 Gene3D G3DSA:3.40.50.150 6 178 1.2E-26 T 12-10-2018 K04M3_37620 7e1140997c7d0819eed9b10eca9d973d 191 Pfam PF13489 Methyltransferase domain 35 172 2.0E-14 T 12-10-2018 K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 SUPERFAMILY SSF49785 438 592 1.4E-25 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 Gene3D G3DSA:3.40.50.200 19 434 6.4E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 Gene3D G3DSA:2.60.120.260 438 592 1.8E-51 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 Pfam PF00082 Subtilase family 65 380 9.9E-32 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 2.4E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 Pfam PF01483 Proprotein convertase P-domain 475 555 1.1E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 K04M3_38730 4951e1f25179a84ffd69f263e0b4d78d 592 SUPERFAMILY SSF52743 23 432 1.18E-59 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 K04M3_40230 4a9c452660ab5fff965c329f8e4f5be6 500 Pfam PF07730 Histidine kinase 304 367 5.0E-11 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 K04M3_40230 4a9c452660ab5fff965c329f8e4f5be6 500 Gene3D G3DSA:3.30.565.10 371 499 2.1E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_40230 4a9c452660ab5fff965c329f8e4f5be6 500 Pfam PF05231 MASE1 12 268 1.5E-13 T 12-10-2018 IPR007895 MASE1 K04M3_40230 4a9c452660ab5fff965c329f8e4f5be6 500 SUPERFAMILY SSF55874 372 498 1.24E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_40230 4a9c452660ab5fff965c329f8e4f5be6 500 SMART SM00387 407 500 8.8E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_40600 e12929d0f423141481406e14b14631de 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 1.6E-65 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related K04M3_40600 e12929d0f423141481406e14b14631de 373 SUPERFAMILY SSF56925 217 342 5.89E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 288 9.7E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 PIRSF PIRSF000103 1 293 2.5E-55 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 1.2E-37 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 Gene3D G3DSA:3.40.50.720 2 167 2.0E-38 T 12-10-2018 K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 SUPERFAMILY SSF51735 6 166 1.31E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 SUPERFAMILY SSF48179 168 291 1.36E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 K04M3_36300 ef430aac164ed644af5be2ea92f5b933 302 Gene3D G3DSA:1.10.1040.10 168 292 2.7E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_35330 1fdda47fc2988c1222e0e371f7714d56 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.2E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_35330 1fdda47fc2988c1222e0e371f7714d56 287 Gene3D G3DSA:1.10.3720.10 61 285 9.3E-36 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35330 1fdda47fc2988c1222e0e371f7714d56 287 SUPERFAMILY SSF161098 22 274 1.59E-42 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35330 1fdda47fc2988c1222e0e371f7714d56 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 1.3E-99 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 K04M3_14040 541dc1aff89ec658ea5dd9084e412dde 494 Gene3D G3DSA:3.40.309.10 269 458 4.1E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_14040 541dc1aff89ec658ea5dd9084e412dde 494 SUPERFAMILY SSF53720 7 492 3.53E-168 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_14040 541dc1aff89ec658ea5dd9084e412dde 494 Pfam PF00171 Aldehyde dehydrogenase family 33 487 1.0E-172 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_14040 541dc1aff89ec658ea5dd9084e412dde 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_14040 541dc1aff89ec658ea5dd9084e412dde 494 Gene3D G3DSA:3.40.605.10 22 486 4.1E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_14040 541dc1aff89ec658ea5dd9084e412dde 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_13680 541dc1aff89ec658ea5dd9084e412dde 494 Gene3D G3DSA:3.40.309.10 269 458 4.1E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_13680 541dc1aff89ec658ea5dd9084e412dde 494 SUPERFAMILY SSF53720 7 492 3.53E-168 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_13680 541dc1aff89ec658ea5dd9084e412dde 494 Pfam PF00171 Aldehyde dehydrogenase family 33 487 1.0E-172 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_13680 541dc1aff89ec658ea5dd9084e412dde 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_13680 541dc1aff89ec658ea5dd9084e412dde 494 Gene3D G3DSA:3.40.605.10 22 486 4.1E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_13680 541dc1aff89ec658ea5dd9084e412dde 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 2.2E-43 T 12-10-2018 IPR000160 GGDEF domain K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 Gene3D G3DSA:3.30.450.20 11 143 3.0E-30 T 12-10-2018 K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 SUPERFAMILY SSF55785 13 94 1.26E-7 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 Gene3D G3DSA:3.30.70.270 150 320 3.5E-56 T 12-10-2018 K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 SMART SM00267 145 317 9.7E-58 T 12-10-2018 IPR000160 GGDEF domain K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 316 1.1E-53 T 12-10-2018 IPR000160 GGDEF domain K04M3_15630 8948c17ef79e18c4eb41e4aca01e0094 320 SUPERFAMILY SSF55073 161 319 2.59E-50 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_45830 34b6cc938436aff1935eff6858bce40b 338 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 324 3.6E-114 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 K04M3_45830 34b6cc938436aff1935eff6858bce40b 338 Pfam PF00962 Adenosine/AMP deaminase 8 323 6.3E-75 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 K04M3_45830 34b6cc938436aff1935eff6858bce40b 338 SUPERFAMILY SSF51556 4 323 8.23E-89 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_45830 34b6cc938436aff1935eff6858bce40b 338 Gene3D G3DSA:3.20.20.140 1 336 4.8E-104 T 12-10-2018 K04M3_45830 34b6cc938436aff1935eff6858bce40b 338 Hamap MF_01962 Adenine deaminase. 4 316 85.293 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 K04M3_15570 2da1bc363d9d4b6f2808cdb79d9ad387 332 Pfam PF11279 Protein of unknown function (DUF3080) 26 329 2.9E-84 T 12-10-2018 IPR021431 Protein of unknown function DUF3080 K04M3_45790 f5d1e7c9048d3f52b5e7f20842e0e3dc 282 PIRSF PIRSF006232 3 282 1.2E-82 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 K04M3_45790 f5d1e7c9048d3f52b5e7f20842e0e3dc 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 3.2E-27 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 K04M3_45790 f5d1e7c9048d3f52b5e7f20842e0e3dc 282 Pfam PF02678 Pirin 23 121 1.7E-32 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 K04M3_45790 f5d1e7c9048d3f52b5e7f20842e0e3dc 282 Gene3D G3DSA:2.60.120.10 143 249 1.1E-83 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_45790 f5d1e7c9048d3f52b5e7f20842e0e3dc 282 SUPERFAMILY SSF51182 5 280 1.07E-72 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_45790 f5d1e7c9048d3f52b5e7f20842e0e3dc 282 Gene3D G3DSA:2.60.120.10 18 275 1.1E-83 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_42640 c90757e763cbbcef579ceea224d5c488 129 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 1.9E-19 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core K04M3_42640 c90757e763cbbcef579ceea224d5c488 129 SUPERFAMILY SSF101386 2 103 3.18E-16 T 12-10-2018 K04M3_42640 c90757e763cbbcef579ceea224d5c488 129 Gene3D G3DSA:1.10.287.1080 8 129 2.9E-15 T 12-10-2018 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 PRINTS PR00207 Flagellin signature 111 134 2.3E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 PRINTS PR00207 Flagellin signature 37 54 2.3E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 PRINTS PR00207 Flagellin signature 76 95 2.3E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 Gene3D G3DSA:1.20.1330.10 44 333 3.0E-75 T 12-10-2018 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 SUPERFAMILY SSF64518 1 384 2.75E-96 T 12-10-2018 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.3E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.9E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 Gene3D G3DSA:3.30.70.2120 174 282 3.0E-75 T 12-10-2018 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07790 5f7375a4ca4625d2054fa46148fefccb 384 Gene3D G3DSA:1.10.8.410 334 384 1.4E-21 T 12-10-2018 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 2.4E-35 T 12-10-2018 IPR012816 NADAR K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 SUPERFAMILY SSF142695 152 322 1.24E-63 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 SUPERFAMILY SSF143990 4 145 1.07E-52 T 12-10-2018 IPR037238 YbiA-like superfamily K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 157 343 1.6E-80 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 PIRSF PIRSF001259 1 353 1.2E-109 T 12-10-2018 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 Pfam PF08719 Domain of unknown function (DUF1768) 7 145 7.0E-37 T 12-10-2018 IPR012816 NADAR K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 Pfam PF00925 GTP cyclohydrolase II 158 320 3.1E-64 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 151 346 44.022 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 Gene3D G3DSA:3.40.50.10990 152 323 4.0E-71 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_49550 720fd5e9481f415c8c9c25463c7af48e 353 Gene3D G3DSA:1.10.357.40 2 151 6.3E-58 T 12-10-2018 IPR037238 YbiA-like superfamily K04M3_15100 61afc866d202361237ee4f0d5e104631 658 Pfam PF01032 FecCD transport family 26 321 1.1E-67 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_15100 61afc866d202361237ee4f0d5e104631 658 Pfam PF01032 FecCD transport family 354 657 7.1E-75 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_15100 61afc866d202361237ee4f0d5e104631 658 Gene3D G3DSA:1.10.3470.10 2 329 3.2E-72 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_15100 61afc866d202361237ee4f0d5e104631 658 Gene3D G3DSA:1.10.3470.10 347 658 1.0E-74 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_15100 61afc866d202361237ee4f0d5e104631 658 SUPERFAMILY SSF81345 11 323 4.58E-58 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_15100 61afc866d202361237ee4f0d5e104631 658 SUPERFAMILY SSF81345 347 657 4.05E-67 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 SUPERFAMILY SSF55874 266 428 1.22E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 SMART SM00387 321 431 1.0E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 SMART SM00388 211 276 1.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 SUPERFAMILY SSF158472 159 208 6.54E-5 T 12-10-2018 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 3.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 Gene3D G3DSA:1.10.287.130 162 277 5.8E-23 T 12-10-2018 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 SUPERFAMILY SSF47384 194 276 5.1E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 Gene3D G3DSA:3.30.565.10 282 431 3.0E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 1.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 SMART SM00304 158 210 2.5E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_45710 c57b0b24a4c7220aa49435371174eda1 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 429 7.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_09200 d06e7e9ed67ee77b6f30c6247e711a62 440 SMART SM00471 58 264 4.2E-7 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_09200 d06e7e9ed67ee77b6f30c6247e711a62 440 SUPERFAMILY SSF109604 19 437 1.7E-77 T 12-10-2018 K04M3_09200 d06e7e9ed67ee77b6f30c6247e711a62 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 2.6E-126 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 K04M3_09200 d06e7e9ed67ee77b6f30c6247e711a62 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.354 T 12-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 K04M3_09200 d06e7e9ed67ee77b6f30c6247e711a62 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 9.4E-25 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain K04M3_09200 d06e7e9ed67ee77b6f30c6247e711a62 440 Pfam PF01966 HD domain 62 145 5.4E-7 T 12-10-2018 IPR006674 HD domain K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 Gene3D G3DSA:3.30.9.10 142 360 2.1E-33 T 12-10-2018 K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 Gene3D G3DSA:3.50.50.60 117 401 2.1E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 Pfam PF01266 FAD dependent oxidoreductase 12 398 6.0E-53 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 SUPERFAMILY SSF54373 273 360 2.22E-9 T 12-10-2018 K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 36 6.0E-5 T 12-10-2018 K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 219 234 6.0E-5 T 12-10-2018 K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 SUPERFAMILY SSF51905 11 417 1.01E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_13270 ba81cb62aa0ef34856342dcdd4bb57f2 418 Gene3D G3DSA:3.50.50.60 7 77 6.9E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_33770 3ff9fbf41ede7bd22d7362d27380c573 224 Gene3D G3DSA:1.10.3810.10 47 223 4.7E-54 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_33770 3ff9fbf41ede7bd22d7362d27380c573 224 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 3 222 37.481 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_33770 3ff9fbf41ede7bd22d7362d27380c573 224 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 3 219 4.0E-64 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_33770 3ff9fbf41ede7bd22d7362d27380c573 224 Pfam PF00912 Transglycosylase 50 216 9.5E-52 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_33770 3ff9fbf41ede7bd22d7362d27380c573 224 SUPERFAMILY SSF53955 51 221 1.29E-57 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Gene3D G3DSA:2.40.50.590 6 153 3.2E-39 T 12-10-2018 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Gene3D G3DSA:1.10.132.60 643 787 5.4E-60 T 12-10-2018 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 SUPERFAMILY SSF56672 385 780 3.11E-116 T 12-10-2018 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 80 296 9.6E-19 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 SMART SM00486 153 558 2.0E-65 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Gene3D G3DSA:3.30.420.10 156 347 8.0E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Pfam PF00136 DNA polymerase family B 379 739 4.3E-41 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 SUPERFAMILY SSF53098 4 389 3.04E-88 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Gene3D G3DSA:3.90.1600.10 348 440 9.1E-29 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Gene3D G3DSA:3.90.1600.10 441 636 3.1E-56 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_20090 a5bde704ccbffd5cf1b695c23b6a2ea9 787 Gene3D G3DSA:3.30.70.2250 41 108 3.2E-39 T 12-10-2018 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 Pfam PF00072 Response regulator receiver domain 4 115 9.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 SUPERFAMILY SSF52172 1 128 7.68E-28 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 SMART SM00421 137 194 7.6E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 SMART SM00448 2 114 4.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 Gene3D G3DSA:1.10.10.10 132 199 4.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 6.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 6.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 6.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 193 1.2E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 Gene3D G3DSA:3.40.50.2300 3 131 2.9E-29 T 12-10-2018 K04M3_19060 a1244aa02f9980be0b84cb0355554c5d 199 SUPERFAMILY SSF46894 135 198 1.05E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 SUPERFAMILY SSF143856 118 234 5.1E-48 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 SUPERFAMILY SSF53649 1 406 1.3E-68 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 Gene3D G3DSA:3.30.70.1250 116 237 7.8E-150 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 PIRSF PIRSF001491 1 406 5.3E-160 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.0E-178 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 Gene3D G3DSA:3.40.720.10 3 406 7.8E-150 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.1E-42 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 K04M3_25410 00bcc950f7d6463b22d67616779ba47e 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.855 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 K04M3_21310 39fd965fe383c746ce067395f517b186 205 SUPERFAMILY SSF103642 182 202 1.57E-7 T 12-10-2018 K04M3_21310 39fd965fe383c746ce067395f517b186 205 Pfam PF02810 SEC-C motif 184 202 9.1E-10 T 12-10-2018 IPR004027 SEC-C motif K04M3_21310 39fd965fe383c746ce067395f517b186 205 Gene3D G3DSA:3.10.450.50 163 203 9.1E-9 T 12-10-2018 K04M3_21310 39fd965fe383c746ce067395f517b186 205 Pfam PF03695 Uncharacterised protein family (UPF0149) 18 151 5.3E-8 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 K04M3_34160 18505f848f5999a82ad678273da1ee48 296 Gene3D G3DSA:2.40.30.170 170 295 1.6E-27 T 12-10-2018 K04M3_34160 18505f848f5999a82ad678273da1ee48 296 Gene3D G3DSA:2.40.50.100 42 101 1.2E-13 T 12-10-2018 K04M3_34160 18505f848f5999a82ad678273da1ee48 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 3.0E-28 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_34160 18505f848f5999a82ad678273da1ee48 296 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 3.7E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_34160 18505f848f5999a82ad678273da1ee48 296 SUPERFAMILY SSF111369 42 242 6.67E-22 T 12-10-2018 K04M3_43140 e08c2f023612699c4c78563ed3731961 442 SUPERFAMILY SSF102114 40 395 7.32E-42 T 12-10-2018 K04M3_43140 e08c2f023612699c4c78563ed3731961 442 Pfam PF13186 Iron-sulfur cluster-binding domain 326 386 1.1E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain K04M3_43140 e08c2f023612699c4c78563ed3731961 442 Gene3D G3DSA:3.20.20.70 40 435 8.3E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_43140 e08c2f023612699c4c78563ed3731961 442 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 203 441 1.0E-11 T 12-10-2018 K04M3_43140 e08c2f023612699c4c78563ed3731961 442 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 325 414 3.3E-18 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain K04M3_43140 e08c2f023612699c4c78563ed3731961 442 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 43 432 8.2E-156 T 12-10-2018 K04M3_43140 e08c2f023612699c4c78563ed3731961 442 Pfam PF04055 Radical SAM superfamily 52 219 1.7E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_43140 e08c2f023612699c4c78563ed3731961 442 Pfam PF13353 4Fe-4S single cluster domain 52 168 1.2E-4 T 12-10-2018 K04M3_00310 b7cbb5e4522e54131cd9ad21f7524d1e 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.5E-27 T 12-10-2018 IPR007475 Membrane fusogenic activity K04M3_10440 d567022209689d209a1f966b2aa17734 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 5.5E-43 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_10440 d567022209689d209a1f966b2aa17734 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 6.6E-93 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 K04M3_10440 d567022209689d209a1f966b2aa17734 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.808 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 K04M3_19650 eb58bd2b73da7cc8ccf4a0c42eaab1e6 167 SUPERFAMILY SSF46785 4 150 1.67E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_19650 eb58bd2b73da7cc8ccf4a0c42eaab1e6 167 SMART SM00347 33 133 4.4E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_19650 eb58bd2b73da7cc8ccf4a0c42eaab1e6 167 Gene3D G3DSA:1.10.10.10 4 149 5.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_19650 eb58bd2b73da7cc8ccf4a0c42eaab1e6 167 Pfam PF01047 MarR family 40 98 4.5E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_13690 d28a07d6eec7f6810305c0fca89b5007 425 Gene3D G3DSA:3.30.9.10 122 342 1.1E-69 T 12-10-2018 K04M3_13690 d28a07d6eec7f6810305c0fca89b5007 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 1.5E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_13690 d28a07d6eec7f6810305c0fca89b5007 425 SUPERFAMILY SSF51905 28 409 1.99E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_13690 d28a07d6eec7f6810305c0fca89b5007 425 Gene3D G3DSA:3.50.50.60 29 381 1.1E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_14050 d28a07d6eec7f6810305c0fca89b5007 425 Gene3D G3DSA:3.30.9.10 122 342 1.1E-69 T 12-10-2018 K04M3_14050 d28a07d6eec7f6810305c0fca89b5007 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 1.5E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_14050 d28a07d6eec7f6810305c0fca89b5007 425 SUPERFAMILY SSF51905 28 409 1.99E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_14050 d28a07d6eec7f6810305c0fca89b5007 425 Gene3D G3DSA:3.50.50.60 29 381 1.1E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 Pfam PF02378 Phosphotransferase system, EIIC 14 322 7.1E-81 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 Gene3D G3DSA:3.30.1360.60 400 479 4.3E-26 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 SUPERFAMILY SSF55604 404 476 1.83E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 478 4.5E-234 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 Pfam PF00367 phosphotransferase system, EIIB 408 439 1.6E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_33120 eeaf1607b65f86ef7844f9e10bfe5603 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 380 463 1.5E-16 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 SUPERFAMILY SSF69304 174 448 2.48E-58 T 12-10-2018 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.962 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Gene3D G3DSA:2.120.10.30 185 450 3.6E-97 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF04052 TolB amino-terminal domain 24 126 3.8E-35 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 SUPERFAMILY SSF52964 29 181 2.75E-40 T 12-10-2018 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 1.5E-166 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Gene3D G3DSA:3.40.50.10070 23 184 7.2E-49 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.3E-14 T 12-10-2018 IPR011659 WD40-like Beta Propeller K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 291 4.2E-8 T 12-10-2018 IPR011659 WD40-like Beta Propeller K04M3_10470 98aa603ad49e6fd233f1c38210409ec4 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 1.4E-8 T 12-10-2018 IPR011659 WD40-like Beta Propeller K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 Gene3D G3DSA:3.40.50.1000 9 193 3.4E-43 T 12-10-2018 IPR023214 HAD superfamily K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 Gene3D G3DSA:1.10.150.240 21 88 3.4E-43 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 7.1E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 7.1E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 7.1E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 7.1E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 189 1.2E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 SUPERFAMILY SSF56784 5 218 2.94E-44 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_42070 f2d7c713a9c18d49b2378a53061306e5 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 1.2E-27 T 12-10-2018 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 SUPERFAMILY SSF47384 193 269 6.28E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 SMART SM00388 204 269 3.8E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 Gene3D G3DSA:3.30.565.10 268 430 9.4E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 SUPERFAMILY SSF55874 258 425 1.01E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 Pfam PF00072 Response regulator receiver domain 451 558 4.4E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 SMART SM00387 316 427 1.4E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 Gene3D G3DSA:3.40.50.2300 447 566 1.4E-34 T 12-10-2018 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 SUPERFAMILY SSF52172 446 565 1.85E-33 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 Gene3D G3DSA:1.10.287.130 184 267 3.4E-23 T 12-10-2018 K04M3_19440 d2dd618e518eddfd07cc164d874a4920 566 SMART SM00448 449 560 4.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 92 6.4E-44 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 1.1E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02670 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.300.20 199 277 2.3E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF47794 429 492 1.73E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:1.10.150.20 352 421 1.9E-29 T 12-10-2018 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.8E-8 T 12-10-2018 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.1480.10 1 129 4.0E-44 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:2.40.50.140 135 198 6.0E-17 T 12-10-2018 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.81 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF47794 356 415 1.44E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF08529 NusA N-terminal domain 4 123 8.8E-36 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 2.1E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.9E-21 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF54814 201 278 7.85E-29 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 4.3E-125 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SMART SM00316 133 198 9.4E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF69705 1 126 4.71E-41 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 K04M3_25640 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:1.10.150.20 431 490 1.0E-24 T 12-10-2018 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 3.4E-230 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:3.40.50.300 1 203 1.0E-69 T 12-10-2018 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:2.40.30.10 338 393 1.2E-29 T 12-10-2018 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Gene3D G3DSA:2.40.30.10 206 334 2.8E-52 T 12-10-2018 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.41 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.6E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.6E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_29100 6609aaaf5cdec6217f8d294e80a7d58d 394 SUPERFAMILY SSF52540 6 219 8.3E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 Pfam PF03466 LysR substrate binding domain 91 292 3.8E-35 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 SUPERFAMILY SSF46785 4 113 7.75E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 Gene3D G3DSA:3.40.190.10 164 264 2.3E-58 T 12-10-2018 K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 SUPERFAMILY SSF53850 91 294 6.05E-36 T 12-10-2018 K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 Gene3D G3DSA:1.10.10.10 3 90 8.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16710 6ebb0a4e37f359e699cf4da97a3d4062 301 Gene3D G3DSA:3.40.190.10 92 290 2.3E-58 T 12-10-2018 K04M3_32040 e7c9675e211f47578ced571388bcd0a1 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-37 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 K04M3_32040 e7c9675e211f47578ced571388bcd0a1 88 Gene3D G3DSA:1.10.1580.20 1 88 8.4E-44 T 12-10-2018 IPR038134 YihD-like superfamily K04M3_32040 e7c9675e211f47578ced571388bcd0a1 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 4.4E-46 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 K04M3_21370 770e6a94a93e9d92b35219e1f5184087 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 2.5E-112 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein K04M3_21370 770e6a94a93e9d92b35219e1f5184087 321 SUPERFAMILY SSF53822 43 279 1.53E-18 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_21370 770e6a94a93e9d92b35219e1f5184087 321 Gene3D G3DSA:3.40.50.2300 46 292 2.3E-101 T 12-10-2018 K04M3_21370 770e6a94a93e9d92b35219e1f5184087 321 Gene3D G3DSA:3.40.50.2300 143 314 2.3E-101 T 12-10-2018 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF55874 323 496 1.26E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:1.10.287.130 236 332 1.9E-27 T 12-10-2018 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:3.30.565.10 335 496 8.8E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SMART SM00448 515 627 3.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SMART SM00387 381 494 4.7E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 4.3E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF47226 611 759 2.75E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF47384 253 335 4.12E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:3.40.50.2300 497 635 3.6E-33 T 12-10-2018 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF01627 Hpt domain 687 761 5.2E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF00072 Response regulator receiver domain 517 627 3.6E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Gene3D G3DSA:1.20.120.160 668 777 1.9E-11 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 1.8E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.8E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 1.8E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 1.8E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SMART SM00388 269 334 8.8E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 2.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_43600 93c2b4b0923a799864b5c67c3e957f2f 785 SUPERFAMILY SSF52172 515 651 1.99E-30 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 Pfam PF04545 Sigma-70, region 4 139 187 1.4E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 SUPERFAMILY SSF88659 127 189 1.35E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 1.8E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 Pfam PF04542 Sigma-70 region 2 34 99 5.2E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 Gene3D G3DSA:1.10.10.10 103 191 4.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 SUPERFAMILY SSF88946 8 118 3.92E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_24780 bfab2237f3594b3a90feadd3e8cf8ec4 194 Gene3D G3DSA:1.10.1740.10 13 96 1.4E-23 T 12-10-2018 K04M3_10180 f7fe01dd30af20658a8925f1cfa730ce 196 Gene3D G3DSA:3.30.1460.30 1 105 5.3E-38 T 12-10-2018 K04M3_10180 f7fe01dd30af20658a8925f1cfa730ce 196 Pfam PF04994 TfoX C-terminal domain 115 193 1.1E-30 T 12-10-2018 IPR007077 TfoX, C-terminal K04M3_10180 f7fe01dd30af20658a8925f1cfa730ce 196 SUPERFAMILY SSF159894 5 103 1.88E-30 T 12-10-2018 K04M3_10180 f7fe01dd30af20658a8925f1cfa730ce 196 Gene3D G3DSA:1.10.150.20 113 196 2.3E-22 T 12-10-2018 K04M3_10180 f7fe01dd30af20658a8925f1cfa730ce 196 Pfam PF04993 TfoX N-terminal domain 12 103 3.5E-30 T 12-10-2018 IPR007076 TfoX, N-terminal K04M3_10180 f7fe01dd30af20658a8925f1cfa730ce 196 PIRSF PIRSF028788 1 196 7.3E-51 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type K04M3_34840 edc41900cb4f31024844da137bd210c1 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 4.3E-181 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 SMART SM00829 14 340 4.6E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 Gene3D G3DSA:3.40.50.720 155 288 1.6E-119 T 12-10-2018 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 SUPERFAMILY SSF51735 143 307 4.62E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_34840 edc41900cb4f31024844da137bd210c1 343 SUPERFAMILY SSF50129 3 175 2.89E-53 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_34840 edc41900cb4f31024844da137bd210c1 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.93 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 Gene3D G3DSA:3.90.180.10 22 330 1.6E-119 T 12-10-2018 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 K04M3_34840 edc41900cb4f31024844da137bd210c1 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.2E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 Pfam PF00072 Response regulator receiver domain 21 131 1.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 Gene3D G3DSA:1.10.10.10 144 240 5.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 SMART SM00448 19 131 1.3E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 238 2.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 SMART SM00862 164 238 1.9E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 Gene3D G3DSA:3.40.50.2300 9 142 2.4E-37 T 12-10-2018 K04M3_38690 4e0b00173da1b80506c120da2ee5fefd 240 SUPERFAMILY SSF52172 19 183 2.85E-38 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 Pfam PF03466 LysR substrate binding domain 90 284 1.4E-42 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 Gene3D G3DSA:3.40.190.10 92 277 7.1E-35 T 12-10-2018 K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 Gene3D G3DSA:3.40.190.10 165 268 7.1E-35 T 12-10-2018 K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 SUPERFAMILY SSF46785 3 111 1.16E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 Gene3D G3DSA:1.10.10.10 3 89 2.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_41950 bc1303d00c0ff41198284e7f3210fac8 301 SUPERFAMILY SSF53850 90 285 2.44E-37 T 12-10-2018 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.5E-111 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.73 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 Gene3D G3DSA:1.10.287.80 6 284 1.4E-110 T 12-10-2018 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.2E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.2E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.2E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.2E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 Pfam PF00231 ATP synthase 5 287 1.8E-98 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 SUPERFAMILY SSF52943 2 288 9.81E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32240 5d12831750974946eabd1b938ad1b700 288 Gene3D G3DSA:3.40.1380.10 61 207 1.4E-110 T 12-10-2018 K04M3_08650 e0c83a7ae7f35615aed026e0f587d56a 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_08650 e0c83a7ae7f35615aed026e0f587d56a 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.1E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_08650 e0c83a7ae7f35615aed026e0f587d56a 563 Gene3D G3DSA:3.40.50.12780 9 457 5.5E-119 T 12-10-2018 K04M3_08650 e0c83a7ae7f35615aed026e0f587d56a 563 Pfam PF00501 AMP-binding enzyme 29 461 1.5E-108 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_08650 e0c83a7ae7f35615aed026e0f587d56a 563 Gene3D G3DSA:3.30.300.310 458 559 1.1E-29 T 12-10-2018 K04M3_08650 e0c83a7ae7f35615aed026e0f587d56a 563 SUPERFAMILY SSF56801 13 553 4.84E-151 T 12-10-2018 K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 SMART SM00342 188 270 4.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 Pfam PF12833 Helix-turn-helix domain 196 270 7.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 SUPERFAMILY SSF51182 31 197 2.59E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 266 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 SUPERFAMILY SSF46689 225 272 2.24E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 Gene3D G3DSA:1.10.10.60 170 273 3.6E-19 T 12-10-2018 K04M3_32820 d25096fdfb9de472139fbcf10ffe256d 277 Gene3D G3DSA:2.60.120.10 11 109 1.2E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_44600 53efd94343c998f2f4e1444444bd334a 212 SUPERFAMILY SSF51161 41 202 1.28E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_44600 53efd94343c998f2f4e1444444bd334a 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.4E-10 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_44600 53efd94343c998f2f4e1444444bd334a 212 Gene3D G3DSA:2.160.10.10 2 209 9.2E-58 T 12-10-2018 K04M3_44600 53efd94343c998f2f4e1444444bd334a 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_22170 f8a36234fb080c624ad48194c2b88e00 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.271 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family K04M3_22170 f8a36234fb080c624ad48194c2b88e00 109 SUPERFAMILY SSF82607 11 103 1.96E-36 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily K04M3_22170 f8a36234fb080c624ad48194c2b88e00 109 PIRSF PIRSF004555 3 109 9.5E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family K04M3_22170 f8a36234fb080c624ad48194c2b88e00 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 6.6E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family K04M3_22170 f8a36234fb080c624ad48194c2b88e00 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 3.0E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family K04M3_22170 f8a36234fb080c624ad48194c2b88e00 109 Gene3D G3DSA:3.30.1310.10 1 109 8.4E-48 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 SUPERFAMILY SSF55620 10 216 2.08E-74 T 12-10-2018 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 12-10-2018 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 Pfam PF01227 GTP cyclohydrolase I 38 215 9.1E-64 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 1.8E-79 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.826 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 Gene3D G3DSA:1.10.286.10 1 84 4.3E-37 T 12-10-2018 K04M3_44820 f869e61ef1a9997b6e091d4d8e65c445 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 K04M3_18040 26c4df20bdf5fb667c72043b774da87b 131 SUPERFAMILY SSF54913 4 66 2.67E-8 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta K04M3_18040 26c4df20bdf5fb667c72043b774da87b 131 Pfam PF09413 Putative prokaryotic signal transducing protein 4 65 3.3E-11 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 K04M3_11260 cb3578041c2b4beaa60466e8330c2d41 292 Pfam PF03466 LysR substrate binding domain 90 245 5.6E-20 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_11260 cb3578041c2b4beaa60466e8330c2d41 292 Gene3D G3DSA:1.10.10.10 2 86 2.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_11260 cb3578041c2b4beaa60466e8330c2d41 292 Gene3D G3DSA:3.40.190.290 93 288 1.1E-35 T 12-10-2018 K04M3_11260 cb3578041c2b4beaa60466e8330c2d41 292 SUPERFAMILY SSF46785 3 85 3.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_11260 cb3578041c2b4beaa60466e8330c2d41 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_11260 cb3578041c2b4beaa60466e8330c2d41 292 SUPERFAMILY SSF53850 90 291 1.9E-25 T 12-10-2018 K04M3_05500 b8bdba72f7b848f70af0c8116cd51449 557 SUPERFAMILY SSF161098 283 538 1.44E-35 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_05500 b8bdba72f7b848f70af0c8116cd51449 557 Gene3D G3DSA:1.10.3720.10 286 550 8.3E-30 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_05500 b8bdba72f7b848f70af0c8116cd51449 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 3.5E-76 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 K04M3_05500 b8bdba72f7b848f70af0c8116cd51449 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 5.3E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_27130 196057ef3af5170915d27c68a7156656 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 4.3E-191 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 K04M3_27130 196057ef3af5170915d27c68a7156656 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 66.017 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 K04M3_27130 196057ef3af5170915d27c68a7156656 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.9E-55 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 2.7E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 SMART SM00846 2 159 6.5E-75 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 PIRSF PIRSF000149 1 342 4.1E-128 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 SUPERFAMILY SSF55347 159 321 1.07E-58 T 12-10-2018 K04M3_27130 196057ef3af5170915d27c68a7156656 345 Gene3D G3DSA:3.40.50.720 3 332 8.3E-129 T 12-10-2018 K04M3_27130 196057ef3af5170915d27c68a7156656 345 SUPERFAMILY SSF51735 2 183 2.98E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_27130 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27130 196057ef3af5170915d27c68a7156656 345 Gene3D G3DSA:3.30.360.10 158 322 8.3E-129 T 12-10-2018 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 Pfam PF01752 Collagenase 317 600 1.3E-106 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 4.2E-53 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 Gene3D G3DSA:2.60.40.10 612 691 5.5E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 1.4E-36 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 1.4E-36 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 1.4E-36 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 1.4E-36 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 1.4E-36 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 Pfam PF00801 PKD domain 619 682 1.9E-11 T 12-10-2018 IPR000601 PKD domain K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 SMART SM00089 611 693 5.6E-25 T 12-10-2018 IPR022409 PKD/Chitinase domain K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 Gene3D G3DSA:1.10.390.20 489 611 5.7E-7 T 12-10-2018 K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 SUPERFAMILY SSF49299 607 690 5.23E-20 T 12-10-2018 IPR035986 PKD domain superfamily K04M3_13350 d29798df8322f25eba98c33a9fccc228 814 Gene3D G3DSA:1.10.1740.190 347 488 6.2E-35 T 12-10-2018 K04M3_48260 26ece3b84db124dfe136aa8da4e4c20a 390 SUPERFAMILY SSF48452 191 381 5.69E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_48260 26ece3b84db124dfe136aa8da4e4c20a 390 Gene3D G3DSA:1.25.40.10 129 274 3.3E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_48260 26ece3b84db124dfe136aa8da4e4c20a 390 Gene3D G3DSA:1.25.40.10 275 389 1.1E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_48260 26ece3b84db124dfe136aa8da4e4c20a 390 SUPERFAMILY SSF48452 93 229 1.3E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_48260 26ece3b84db124dfe136aa8da4e4c20a 390 Gene3D G3DSA:1.25.40.10 19 128 2.1E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_22710 9b144bcb8d48ba0e98b62b54010681a1 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.4E-22 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 K04M3_22710 9b144bcb8d48ba0e98b62b54010681a1 295 Gene3D G3DSA:3.40.50.300 22 263 2.9E-59 T 12-10-2018 K04M3_22710 9b144bcb8d48ba0e98b62b54010681a1 295 PIRSF PIRSF003092 6 287 7.9E-86 T 12-10-2018 IPR025501 ATP binding protein MinD K04M3_22710 9b144bcb8d48ba0e98b62b54010681a1 295 SUPERFAMILY SSF52540 22 283 1.15E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11930 8d3c1ee8a785d51f8523df6241a3f17e 284 Pfam PF01380 SIS domain 124 252 6.2E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_11930 8d3c1ee8a785d51f8523df6241a3f17e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 K04M3_11930 8d3c1ee8a785d51f8523df6241a3f17e 284 SUPERFAMILY SSF53697 93 278 1.19E-39 T 12-10-2018 K04M3_11930 8d3c1ee8a785d51f8523df6241a3f17e 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_11930 8d3c1ee8a785d51f8523df6241a3f17e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_11930 8d3c1ee8a785d51f8523df6241a3f17e 284 Gene3D G3DSA:3.40.50.10490 94 276 3.0E-39 T 12-10-2018 K04M3_00660 94e66a1e2dd0909c8c6539a96f7c4046 141 Pfam PF00582 Universal stress protein family 3 138 2.6E-21 T 12-10-2018 IPR006016 UspA K04M3_00660 94e66a1e2dd0909c8c6539a96f7c4046 141 PIRSF PIRSF006276 1 141 4.1E-53 T 12-10-2018 IPR006015 Universal stress protein A K04M3_00660 94e66a1e2dd0909c8c6539a96f7c4046 141 Gene3D G3DSA:3.40.50.620 2 141 5.2E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_00660 94e66a1e2dd0909c8c6539a96f7c4046 141 SUPERFAMILY SSF52402 3 139 1.34E-33 T 12-10-2018 K04M3_22860 58de6129f108461bad4f6b08979063b7 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.2E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 K04M3_22860 58de6129f108461bad4f6b08979063b7 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 2.2E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 K04M3_22860 58de6129f108461bad4f6b08979063b7 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 2.2E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 K04M3_22860 58de6129f108461bad4f6b08979063b7 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 6.8E-36 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE K04M3_20540 b118c852c2ce8e8e09c9fcd6415e8949 305 SUPERFAMILY SSF56959 87 283 3.92E-19 T 12-10-2018 IPR036435 Leukocidin/porin MspA superfamily K04M3_20540 b118c852c2ce8e8e09c9fcd6415e8949 305 Gene3D G3DSA:2.70.240.10 66 302 3.8E-20 T 12-10-2018 K04M3_20540 b118c852c2ce8e8e09c9fcd6415e8949 305 Pfam PF07968 Leukocidin/Hemolysin toxin family 105 300 7.0E-15 T 12-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 SMART SM00849 34 209 2.2E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 Gene3D G3DSA:3.60.15.10 1 247 1.1E-105 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 SUPERFAMILY SSF56281 8 285 2.03E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 Pfam PF00258 Flavodoxin 256 388 2.2E-11 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 SUPERFAMILY SSF52218 251 398 1.84E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 4.8E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 Gene3D G3DSA:2.20.28.10 448 500 8.0E-21 T 12-10-2018 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 PRINTS PR00163 Rubredoxin signature 449 465 1.3E-5 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 PRINTS PR00163 Rubredoxin signature 479 495 1.3E-5 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 SUPERFAMILY SSF57802 448 499 7.74E-17 T 12-10-2018 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 Pfam PF00301 Rubredoxin 450 495 4.7E-18 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 K04M3_35700 bcb141fc2c5ea6bfda5de0748d5b9386 500 Gene3D G3DSA:3.40.50.360 253 395 2.0E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 1.3E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 Pfam PF17200 Single Cache domain 2 45 192 3.6E-39 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 SUPERFAMILY SSF55874 320 443 4.06E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 SMART SM00387 353 447 1.6E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 PIRSF PIRSF037314 1 451 5.8E-189 T 12-10-2018 IPR017171 Signal transduction histidine kinase, MctS K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 SMART SM01049 42 133 1.3E-27 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 Gene3D G3DSA:3.30.450.20 27 203 5.5E-46 T 12-10-2018 K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 Gene3D G3DSA:3.30.565.10 313 448 1.4E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_19670 0a1fbd3b48c4c7ef8ffdac43b49df350 451 Pfam PF07730 Histidine kinase 250 315 3.7E-14 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 2.1E-36 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 Gene3D G3DSA:1.10.10.60 188 293 4.9E-27 T 12-10-2018 K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 SUPERFAMILY SSF46689 193 243 1.23E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 Pfam PF12833 Helix-turn-helix domain 215 292 7.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 SMART SM00342 209 292 6.2E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_42140 8c8d746a83d59f37d90a24bb356ed4f1 293 SUPERFAMILY SSF46689 245 292 5.38E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 12-10-2018 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 17 229 9.5E-84 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 53 178 9.5E-84 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 12-10-2018 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_02880 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF00679 Elongation factor G C-terminus 598 684 2.1E-29 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF54980 402 479 1.91E-20 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.7E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF50447 262 400 2.87E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 101.876 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF52540 3 279 2.78E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF14492 Elongation Factor G, domain II 402 475 1.0E-28 T 12-10-2018 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF03764 Elongation factor G, domain IV 477 595 3.8E-42 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.30.70.240 602 672 1.6E-82 T 12-10-2018 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.40.50.300 1 292 6.6E-100 T 12-10-2018 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF54980 599 689 7.55E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.30.70.870 431 481 2.0E-20 T 12-10-2018 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:3.30.230.10 482 685 1.6E-82 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 1.0E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SMART SM00889 478 596 4.3E-60 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SMART SM00838 598 685 3.2E-47 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 Gene3D G3DSA:2.40.30.10 293 414 4.8E-44 T 12-10-2018 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 2.0E-289 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_25350 d772aff9ddc7aff5a03623b4dec3a582 696 SUPERFAMILY SSF54211 477 596 1.29E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 178 191 1.7E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 1.7E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.7E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 1.7E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 Gene3D G3DSA:3.40.50.1000 11 192 4.8E-43 T 12-10-2018 IPR023214 HAD superfamily K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 1.3E-27 T 12-10-2018 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 Gene3D G3DSA:1.10.150.240 22 92 4.8E-43 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 6.0E-55 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 189 1.6E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_44950 c78d2aca31fa7e3f849488d93642a8e1 200 SUPERFAMILY SSF56784 8 193 1.19E-44 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_45970 30ca6e2b1b1b14d59123b81bb338c7c9 308 SUPERFAMILY SSF53807 21 300 7.36E-50 T 12-10-2018 K04M3_45970 30ca6e2b1b1b14d59123b81bb338c7c9 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 50 300 7.9E-23 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 K04M3_45970 30ca6e2b1b1b14d59123b81bb338c7c9 308 Gene3D G3DSA:3.40.50.1980 195 302 4.4E-5 T 12-10-2018 K04M3_45970 30ca6e2b1b1b14d59123b81bb338c7c9 308 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 120 128 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 K04M3_45970 30ca6e2b1b1b14d59123b81bb338c7c9 308 Gene3D G3DSA:3.40.50.1980 39 192 1.9E-18 T 12-10-2018 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 Gene3D G3DSA:3.40.50.1950 1 185 2.5E-55 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 Pfam PF02441 Flavoprotein 7 179 6.5E-43 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 4.0E-77 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 9.8E-153 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 SUPERFAMILY SSF102645 184 397 4.05E-80 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 Gene3D G3DSA:3.40.50.10300 186 399 1.6E-84 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 K04M3_01660 14db49c2b752022f1f54a9be04da9930 399 SUPERFAMILY SSF52507 1 182 1.31E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-38 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 4.1E-36 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 PIRSF PIRSF004682 1 183 4.9E-64 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 Pfam PF13242 HAD-hyrolase-like 107 176 5.8E-13 T 12-10-2018 K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.6E-81 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 Gene3D G3DSA:3.40.50.1000 2 183 3.1E-62 T 12-10-2018 IPR023214 HAD superfamily K04M3_06840 fdfb7dac3c66ecaaa051b58958adf3ba 183 SUPERFAMILY SSF56784 4 181 2.07E-49 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_01650 496eace9c4db526e05741d4c164155e2 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.256 T 12-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 K04M3_01650 496eace9c4db526e05741d4c164155e2 196 SUPERFAMILY SSF48498 81 191 4.0E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_01650 496eace9c4db526e05741d4c164155e2 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 3.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_01650 496eace9c4db526e05741d4c164155e2 196 SUPERFAMILY SSF46689 5 78 1.12E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_01650 496eace9c4db526e05741d4c164155e2 196 Gene3D G3DSA:1.10.357.10 3 196 7.2E-78 T 12-10-2018 K04M3_05020 b6e47222ec96da378abcb167be385513 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 2.4E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_05020 b6e47222ec96da378abcb167be385513 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 2.4E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_05020 b6e47222ec96da378abcb167be385513 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 2.4E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_05020 b6e47222ec96da378abcb167be385513 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_05020 b6e47222ec96da378abcb167be385513 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 1.9E-38 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_05020 b6e47222ec96da378abcb167be385513 168 TIGRFAM TIGR00077 lspA: signal peptidase II 10 166 7.4E-49 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_05020 b6e47222ec96da378abcb167be385513 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.734 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 Pfam PF00005 ABC transporter 379 531 3.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 SUPERFAMILY SSF90123 28 347 1.57E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 Pfam PF00664 ABC transporter transmembrane region 40 308 3.3E-17 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 Gene3D G3DSA:3.40.50.300 351 608 1.6E-91 T 12-10-2018 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 Gene3D G3DSA:1.20.1560.10 9 338 3.3E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 SMART SM00382 386 577 4.7E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_32780 cdc036e550016f20272ccf9ff0b43e52 616 SUPERFAMILY SSF52540 351 601 3.62E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 142.037 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 SMART SM00788 3 417 1.5E-174 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 4.0E-130 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 Gene3D G3DSA:3.40.440.10 6 255 1.4E-72 T 12-10-2018 K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 SUPERFAMILY SSF52540 1 417 1.91E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 Gene3D G3DSA:3.90.170.10 266 418 4.5E-50 T 12-10-2018 K04M3_46280 9ac1a36be02ffca1b3cd88754da9d6cb 418 Gene3D G3DSA:1.10.300.10 99 200 1.4E-72 T 12-10-2018 K04M3_28330 46be537f3c005e24f9dfef40c7ed2a68 364 SUPERFAMILY SSF48452 181 337 7.05E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_28330 46be537f3c005e24f9dfef40c7ed2a68 364 SMART SM00028 310 343 320.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_28330 46be537f3c005e24f9dfef40c7ed2a68 364 SMART SM00028 276 309 84.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_28330 46be537f3c005e24f9dfef40c7ed2a68 364 SMART SM00028 176 209 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_28330 46be537f3c005e24f9dfef40c7ed2a68 364 SMART SM00028 210 243 14.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_28330 46be537f3c005e24f9dfef40c7ed2a68 364 Gene3D G3DSA:1.25.40.10 145 360 7.4E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 Gene3D G3DSA:2.40.50.1020 160 241 2.6E-9 T 12-10-2018 K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 Pfam PF04397 LytTr DNA-binding domain 146 238 1.5E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 SMART SM00850 145 239 1.9E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 SMART SM00448 2 112 1.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 Gene3D G3DSA:3.40.50.2300 1 129 6.1E-29 T 12-10-2018 K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 SUPERFAMILY SSF52172 1 123 2.28E-28 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_05060 4f4e78d1a8bf373690bdb2676fd7a14c 242 Pfam PF00072 Response regulator receiver domain 5 112 4.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_11180 ab6d7e10e4ea006c3d830077aef09ead 171 Pfam PF02810 SEC-C motif 4 18 3.3E-6 T 12-10-2018 IPR004027 SEC-C motif K04M3_11180 ab6d7e10e4ea006c3d830077aef09ead 171 Pfam PF02810 SEC-C motif 154 171 5.1E-10 T 12-10-2018 IPR004027 SEC-C motif K04M3_11180 ab6d7e10e4ea006c3d830077aef09ead 171 SUPERFAMILY SSF103642 151 171 3.76E-8 T 12-10-2018 K04M3_11180 ab6d7e10e4ea006c3d830077aef09ead 171 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.464 T 12-10-2018 IPR023006 Uncharacterised protein family UPF0225 K04M3_11180 ab6d7e10e4ea006c3d830077aef09ead 171 Gene3D G3DSA:3.10.450.50 1 171 1.0E-51 T 12-10-2018 K04M3_11180 ab6d7e10e4ea006c3d830077aef09ead 171 SUPERFAMILY SSF54427 28 128 1.14E-34 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_11880 ccb0cfffa28bd88377c72b110f32134f 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.406 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_11880 ccb0cfffa28bd88377c72b110f32134f 400 Gene3D G3DSA:3.40.50.720 1 399 7.3E-182 T 12-10-2018 K04M3_11880 ccb0cfffa28bd88377c72b110f32134f 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_11880 ccb0cfffa28bd88377c72b110f32134f 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.4E-31 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_11880 ccb0cfffa28bd88377c72b110f32134f 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 7.6E-113 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 SMART SM00304 168 221 1.3E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 2.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 SMART SM00387 330 440 2.1E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 Gene3D G3DSA:1.10.287.130 172 287 1.7E-19 T 12-10-2018 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 SUPERFAMILY SSF55874 326 437 1.7E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 SUPERFAMILY SSF47384 205 284 6.08E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 SMART SM00388 222 286 1.7E-4 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 3.6E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_45480 57ea345e69b9f7bebe99e6282bb47466 440 Gene3D G3DSA:3.30.565.10 309 440 5.2E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 Pfam PF00710 Asparaginase, N-terminal 5 191 1.9E-67 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 SMART SM00870 5 324 2.8E-141 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 PIRSF PIRSF001220 1 335 1.2E-95 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 SUPERFAMILY SSF53774 3 336 3.4E-115 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 Gene3D G3DSA:3.40.50.40 210 337 5.0E-45 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.7E-117 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 PIRSF PIRSF500176 2 333 1.0E-109 T 12-10-2018 K04M3_21970 93e1981a00279bc052ff2c234b9e5ab1 337 Gene3D G3DSA:3.40.50.1170 1 209 2.3E-93 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.2E-43 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.561 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 SUPERFAMILY SSF55831 2 283 9.03E-93 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 Gene3D G3DSA:3.30.572.10 1 283 1.8E-81 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_04930 c646a79d857f7807124483edd4513e1d 283 Pfam PF00303 Thymidylate synthase 2 283 3.0E-75 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 K04M3_15250 895fafc565079a3800f87f726057a924 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 2.5E-32 T 12-10-2018 IPR000160 GGDEF domain K04M3_15250 895fafc565079a3800f87f726057a924 513 SMART SM00267 346 512 7.5E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_15250 895fafc565079a3800f87f726057a924 513 Gene3D G3DSA:3.30.70.270 351 512 2.2E-43 T 12-10-2018 K04M3_15250 895fafc565079a3800f87f726057a924 513 SMART SM01079 75 274 3.2E-25 T 12-10-2018 IPR006189 CHASE domain K04M3_15250 895fafc565079a3800f87f726057a924 513 SUPERFAMILY SSF55073 362 511 2.59E-36 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_15250 895fafc565079a3800f87f726057a924 513 Pfam PF03924 CHASE domain 86 272 3.2E-22 T 12-10-2018 IPR006189 CHASE domain K04M3_15250 895fafc565079a3800f87f726057a924 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 2.6E-33 T 12-10-2018 IPR000160 GGDEF domain K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 SUPERFAMILY SSF55282 4 179 1.04E-78 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 Gene3D G3DSA:3.30.1440.10 1 179 4.1E-81 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 PIRSF PIRSF002161 1 179 4.4E-66 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02750 e6172b282c35510ea5bb47df4d577600 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.113 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_10200 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 SUPERFAMILY SSF89155 8 212 3.01E-51 T 12-10-2018 IPR036411 TorD-like superfamily K04M3_10200 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 1.3E-36 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone K04M3_10200 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Gene3D G3DSA:1.20.1280.20 129 214 2.9E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 K04M3_10200 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.85 T 12-10-2018 IPR023069 Chaperone TorD K04M3_10200 81deaba3b8cdf5f067b1af8ae3bc6bb5 215 Gene3D G3DSA:1.20.120.1820 3 126 8.9E-39 T 12-10-2018 K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 2.0E-12 T 12-10-2018 IPR000014 PAS domain K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00267 135 304 1.1E-7 T 12-10-2018 IPR000160 GGDEF domain K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 Gene3D G3DSA:3.20.20.450 316 565 8.6E-80 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 4.5E-14 T 12-10-2018 IPR000160 GGDEF domain K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SUPERFAMILY SSF141868 319 562 4.58E-74 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 Pfam PF08447 PAS fold 45 115 6.9E-12 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00091 22 88 0.0087 T 12-10-2018 IPR000014 PAS domain K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 Pfam PF00563 EAL domain 322 555 1.0E-65 T 12-10-2018 IPR001633 EAL domain K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SUPERFAMILY SSF55073 153 306 1.33E-18 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00086 95 135 0.0015 T 12-10-2018 IPR001610 PAC motif K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 Gene3D G3DSA:3.30.450.20 17 131 3.9E-17 T 12-10-2018 K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SMART SM00052 314 560 5.6E-68 T 12-10-2018 IPR001633 EAL domain K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 Gene3D G3DSA:3.30.70.270 145 315 4.7E-21 T 12-10-2018 K04M3_14950 37d2377770dd61cf5e543c0a9d5c62c8 567 SUPERFAMILY SSF55785 27 137 2.79E-17 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 PIRSF PIRSF000521 122 422 7.0E-42 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 PIRSF PIRSF000521 2 129 4.1E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 9.7E-176 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 Gene3D G3DSA:3.90.1150.10 4 416 2.6E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 Gene3D G3DSA:3.40.640.10 58 317 2.6E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 SUPERFAMILY SSF53383 18 419 9.91E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_13730 f2e742b3586db395b2d6ea57273a4cca 423 Pfam PF00202 Aminotransferase class-III 23 419 5.5E-129 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 PIRSF PIRSF000521 122 422 7.0E-42 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 PIRSF PIRSF000521 2 129 4.1E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 9.7E-176 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 Gene3D G3DSA:3.90.1150.10 4 416 2.6E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 Gene3D G3DSA:3.40.640.10 58 317 2.6E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 SUPERFAMILY SSF53383 18 419 9.91E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_14090 f2e742b3586db395b2d6ea57273a4cca 423 Pfam PF00202 Aminotransferase class-III 23 419 5.5E-129 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 Gene3D G3DSA:3.40.50.300 311 556 2.2E-64 T 12-10-2018 K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 SMART SM00382 352 545 2.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 SUPERFAMILY SSF90123 18 307 1.44E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 20 552 1.1E-183 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 SUPERFAMILY SSF52540 315 550 2.06E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 Pfam PF00005 ABC transporter 343 490 4.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 Gene3D G3DSA:1.20.1560.10 5 309 1.9E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_35470 7e2a1744dec82fb1ed7897792b81153d 572 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 12-10-2018 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 1 63 5.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 64 159 5.0E-24 T 12-10-2018 K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_10800 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_37090 78717edf77de5d114191e5779d0b8476 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 Gene3D G3DSA:3.40.190.10 92 286 9.9E-41 T 12-10-2018 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 Gene3D G3DSA:3.40.190.10 164 261 9.9E-41 T 12-10-2018 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 SUPERFAMILY SSF53850 89 291 1.72E-27 T 12-10-2018 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-26 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_37090 78717edf77de5d114191e5779d0b8476 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_37090 78717edf77de5d114191e5779d0b8476 295 Gene3D G3DSA:1.10.10.10 3 89 1.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_37090 78717edf77de5d114191e5779d0b8476 295 SUPERFAMILY SSF46785 8 88 9.53E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 SUPERFAMILY SSF52317 1 191 2.75E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 Gene3D G3DSA:3.40.50.880 1 193 8.6E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 12-10-2018 K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 7.2E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase K04M3_29360 b2d5bf7d863a1ff2cb8c6b1a9e0a4295 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.6E-86 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_26180 200e4e35c158edbc719ea3d27ee43b33 222 Pfam PF00484 Carbonic anhydrase 38 188 3.1E-50 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 K04M3_26180 200e4e35c158edbc719ea3d27ee43b33 222 Gene3D G3DSA:3.40.1050.10 1 222 8.1E-91 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 K04M3_26180 200e4e35c158edbc719ea3d27ee43b33 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 K04M3_26180 200e4e35c158edbc719ea3d27ee43b33 222 SMART SM00947 30 192 1.5E-67 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 K04M3_26180 200e4e35c158edbc719ea3d27ee43b33 222 SUPERFAMILY SSF53056 2 212 2.22E-74 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 K04M3_26180 200e4e35c158edbc719ea3d27ee43b33 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 SMART SM00387 15 131 2.8E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 16 128 3.1E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 115 128 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 91 109 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 74 84 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 56 70 1.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 SUPERFAMILY SSF55874 5 131 3.27E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_13900 0bd9cdcee1432bca88f3b4368469ae21 161 Gene3D G3DSA:3.30.565.10 1 134 2.2E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_17430 e1d5e796d27b5f0eea41d6b9ecf26ce6 143 Pfam PF05932 Tir chaperone protein (CesT) family 9 90 6.3E-8 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 K04M3_17430 e1d5e796d27b5f0eea41d6b9ecf26ce6 143 SUPERFAMILY SSF69635 4 117 2.41E-27 T 12-10-2018 K04M3_17430 e1d5e796d27b5f0eea41d6b9ecf26ce6 143 Gene3D G3DSA:3.30.1460.10 1 118 5.9E-23 T 12-10-2018 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.220.120 1 64 2.0E-29 T 12-10-2018 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.0E-120 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88659 516 618 1.74E-25 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.601.10 113 455 2.1E-139 T 12-10-2018 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04546 Sigma-70, non-essential region 139 355 3.5E-67 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 7.0E-29 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88946 115 453 8.77E-96 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 5.3E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.83 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_03750 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.10.10 536 620 1.5E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26650 cd1cf2147c79cb5551b0f78f4db66a29 160 SUPERFAMILY SSF142433 4 159 1.02E-55 T 12-10-2018 IPR036653 CinA-like, C-terminal K04M3_26650 cd1cf2147c79cb5551b0f78f4db66a29 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 158 3.4E-51 T 12-10-2018 IPR008136 CinA, C-terminal K04M3_26650 cd1cf2147c79cb5551b0f78f4db66a29 160 Gene3D G3DSA:3.90.950.20 1 160 8.2E-59 T 12-10-2018 IPR036653 CinA-like, C-terminal K04M3_26650 cd1cf2147c79cb5551b0f78f4db66a29 160 Pfam PF02464 Competence-damaged protein 5 158 6.9E-58 T 12-10-2018 IPR008136 CinA, C-terminal K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Gene3D G3DSA:2.40.160.50 425 804 3.4E-122 T 12-10-2018 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 3.2E-278 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Gene3D G3DSA:3.10.20.310 18 91 1.2E-18 T 12-10-2018 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Pfam PF01103 Surface antigen 448 804 5.4E-91 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Pfam PF07244 Surface antigen variable number repeat 266 344 5.0E-9 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.6E-17 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Pfam PF07244 Surface antigen variable number repeat 176 263 4.4E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Gene3D G3DSA:3.10.20.310 347 424 6.7E-26 T 12-10-2018 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Gene3D G3DSA:3.10.20.310 175 263 2.3E-22 T 12-10-2018 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 PIRSF PIRSF006076 1 804 1.1E-245 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.837 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 12-10-2018 K04M3_23920 8ba4eacd362d06fe853c44194de77494 804 Gene3D G3DSA:3.10.20.310 264 346 5.2E-14 T 12-10-2018 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 ProSitePatterns PS00489 Bacteriophage-type RNA polymerase family active site signature 2. 674 688 - T 12-10-2018 IPR002092 DNA-directed RNA polymerase, phage-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 Pfam PF14700 DNA-directed RNA polymerase N-terminal 246 321 4.7E-7 T 12-10-2018 IPR029262 DNA-directed RNA polymerase, N-terminal KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 SMART SM01311 39 324 1.2E-4 T 12-10-2018 IPR029262 DNA-directed RNA polymerase, N-terminal KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 SUPERFAMILY SSF56672 38 593 1.6E-91 T 12-10-2018 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 Pfam PF00940 DNA-dependent RNA polymerase 457 927 2.8E-92 T 12-10-2018 IPR002092 DNA-directed RNA polymerase, phage-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 ProSitePatterns PS00900 Bacteriophage-type RNA polymerase family active site signature 1. 541 552 - T 12-10-2018 IPR002092 DNA-directed RNA polymerase, phage-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 Gene3D G3DSA:1.10.1320.10 27 324 3.0E-50 T 12-10-2018 IPR037159 DNA-directed RNA polymerase, N-terminal domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 K04M3_39370 83c2d6a5801e27c8cf66cb0e32840c05 928 SUPERFAMILY SSF56672 657 927 7.11E-68 T 12-10-2018 K04M3_22110 3f72cff94757dc3992024d8c0f0be4cc 559 SUPERFAMILY SSF82861 300 386 9.55E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 K04M3_22110 3f72cff94757dc3992024d8c0f0be4cc 559 SUPERFAMILY SSF82689 456 552 9.94E-32 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 K04M3_22110 3f72cff94757dc3992024d8c0f0be4cc 559 SUPERFAMILY SSF50182 387 453 2.22E-18 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_22110 3f72cff94757dc3992024d8c0f0be4cc 559 Pfam PF00924 Mechanosensitive ion channel 351 542 6.0E-54 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 K04M3_22110 3f72cff94757dc3992024d8c0f0be4cc 559 Gene3D G3DSA:2.30.30.60 403 451 2.6E-18 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily K04M3_22110 3f72cff94757dc3992024d8c0f0be4cc 559 Gene3D G3DSA:3.30.70.100 454 546 2.0E-26 T 12-10-2018 K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 Gene3D G3DSA:3.40.50.620 1 142 2.8E-36 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 12-10-2018 IPR006015 Universal stress protein A K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 12-10-2018 IPR006015 Universal stress protein A K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 12-10-2018 IPR006015 Universal stress protein A K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 SUPERFAMILY SSF52402 2 143 7.7E-35 T 12-10-2018 K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 Pfam PF00582 Universal stress protein family 1 142 2.1E-32 T 12-10-2018 IPR006016 UspA K04M3_03250 5ef9e5eae63c4dcbd9f69f30125977d7 145 PIRSF PIRSF006276 1 145 1.9E-19 T 12-10-2018 IPR006015 Universal stress protein A K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 Pfam PF07690 Major Facilitator Superfamily 34 401 3.6E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 4.6E-235 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 SUPERFAMILY SSF103473 16 450 1.1E-86 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 Gene3D G3DSA:1.20.1250.20 18 227 4.6E-58 T 12-10-2018 K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 Gene3D G3DSA:1.20.1250.20 241 452 6.4E-63 T 12-10-2018 K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 PIRSF PIRSF002808 5 452 4.1E-170 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 K04M3_25140 118c80e56aecdb2663de5bac45fc724c 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 1.7E-151 T 12-10-2018 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 SUPERFAMILY SSF53706 48 631 1.7E-150 T 12-10-2018 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 7.8E-8 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 Pfam PF00384 Molybdopterin oxidoreductase 110 492 1.2E-25 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 PIRSF PIRSF000144 1 767 0.0 T 12-10-2018 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 Gene3D G3DSA:3.40.228.10 182 404 2.4E-68 T 12-10-2018 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 Gene3D G3DSA:3.40.50.740 121 498 2.4E-68 T 12-10-2018 K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 SUPERFAMILY SSF50692 645 764 1.94E-16 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_40280 37ecb5e120e7733203236a66e914cbcf 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 1.1E-292 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 SUPERFAMILY SSF51726 1 354 6.8E-123 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.597 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.1E-141 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 Gene3D G3DSA:3.20.20.210 1 355 3.1E-158 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 2.7E-139 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 K04M3_30490 173df1fc755cd4769a73d65eade6b314 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 K04M3_34330 3bfe3852d6cc5aaf66c04c41c24474d5 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 6.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_34330 3bfe3852d6cc5aaf66c04c41c24474d5 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 6.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_34330 3bfe3852d6cc5aaf66c04c41c24474d5 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 4.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_34330 3bfe3852d6cc5aaf66c04c41c24474d5 181 SUPERFAMILY SSF46689 2 71 2.05E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_34330 3bfe3852d6cc5aaf66c04c41c24474d5 181 Gene3D G3DSA:1.10.357.10 1 181 2.8E-47 T 12-10-2018 K04M3_34330 3bfe3852d6cc5aaf66c04c41c24474d5 181 SUPERFAMILY SSF48498 91 165 2.4E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 6.9E-4 T 12-10-2018 K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.3E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 1.6E-61 T 12-10-2018 K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 SUPERFAMILY SSF51735 4 238 1.71E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 Gene3D G3DSA:3.40.50.720 1 239 1.3E-81 T 12-10-2018 K04M3_45950 efe7287cf26563c92c8f81e88e698c12 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_12870 dcd83c98162ba4aa275e1ed103940b18 519 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 44 488 1.8E-96 T 12-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 K04M3_12870 dcd83c98162ba4aa275e1ed103940b18 519 Pfam PF05136 Phage portal protein, lambda family 40 382 1.4E-77 T 12-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 K04M3_27340 7d7da8f2c6040bfed967bbbd10aa0f30 306 SUPERFAMILY SSF56601 4 306 6.89E-114 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_27340 7d7da8f2c6040bfed967bbbd10aa0f30 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 3.8E-130 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 K04M3_27340 7d7da8f2c6040bfed967bbbd10aa0f30 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.389 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 K04M3_27340 7d7da8f2c6040bfed967bbbd10aa0f30 306 Pfam PF04960 Glutaminase 22 306 1.2E-112 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 K04M3_27340 7d7da8f2c6040bfed967bbbd10aa0f30 306 Gene3D G3DSA:3.40.710.10 2 306 1.2E-109 T 12-10-2018 K04M3_51550 e6aa57b7960c290874e7801c53586691 182 SUPERFAMILY SSF56925 34 182 1.33E-14 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_51550 e6aa57b7960c290874e7801c53586691 182 Pfam PF13505 Outer membrane protein beta-barrel domain 12 182 4.6E-12 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_51550 e6aa57b7960c290874e7801c53586691 182 Gene3D G3DSA:2.40.160.20 19 182 1.8E-13 T 12-10-2018 K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SUPERFAMILY SSF50998 32 375 1.83E-80 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 Pfam PF13360 PQQ-like domain 76 310 2.3E-50 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 63 94 7.2E-7 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 147 178 0.31 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 322 353 0.08 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 191 223 330.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 243 274 80.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 106 138 0.001 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 SMART SM00564 280 312 45.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 9.1E-141 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 Gene3D G3DSA:2.130.10.10 18 385 2.1E-97 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_05850 e9b646f3ab468c61448faed37fd4e3a0 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.863 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB K04M3_23050 c29b197b8ea5e8d2ba7b1ce2ff514052 116 Pfam PF03960 ArsC family 6 112 1.7E-19 T 12-10-2018 IPR006660 Arsenate reductase-like K04M3_23050 c29b197b8ea5e8d2ba7b1ce2ff514052 116 Gene3D G3DSA:3.40.30.10 2 114 3.4E-43 T 12-10-2018 K04M3_23050 c29b197b8ea5e8d2ba7b1ce2ff514052 116 SUPERFAMILY SSF52833 3 114 1.74E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_23050 c29b197b8ea5e8d2ba7b1ce2ff514052 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.5E-32 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR K04M3_48380 65eed975ddb4c8bafb85136a84aad4ae 118 Gene3D G3DSA:3.30.1370.150 59 118 4.5E-29 T 12-10-2018 K04M3_48380 65eed975ddb4c8bafb85136a84aad4ae 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.2E-29 T 12-10-2018 IPR021230 Protein of unknown function DUF2810 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 555 6.2E-9 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 3.2E-267 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 8.4E-128 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 SMART SM00642 18 419 2.4E-162 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 Gene3D G3DSA:3.20.20.80 1 113 6.5E-51 T 12-10-2018 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 Gene3D G3DSA:3.20.20.80 176 480 2.4E-115 T 12-10-2018 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 SUPERFAMILY SSF51445 9 477 9.43E-163 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 SUPERFAMILY SSF51011 480 559 4.16E-16 T 12-10-2018 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 Gene3D G3DSA:3.90.400.10 114 175 4.1E-30 T 12-10-2018 K04M3_06870 4482000518bdd7f7d6f16ebaa68b3b57 561 Gene3D G3DSA:2.60.40.1180 481 559 2.0E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_48950 0bf38ed9b8412d4552186430a5dc1b84 290 SUPERFAMILY SSF46785 4 87 4.09E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_48950 0bf38ed9b8412d4552186430a5dc1b84 290 Gene3D G3DSA:3.40.190.290 93 288 3.0E-68 T 12-10-2018 K04M3_48950 0bf38ed9b8412d4552186430a5dc1b84 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_48950 0bf38ed9b8412d4552186430a5dc1b84 290 SUPERFAMILY SSF53850 89 289 5.79E-48 T 12-10-2018 K04M3_48950 0bf38ed9b8412d4552186430a5dc1b84 290 Pfam PF03466 LysR substrate binding domain 88 288 2.1E-47 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_48950 0bf38ed9b8412d4552186430a5dc1b84 290 Gene3D G3DSA:1.10.10.10 3 92 6.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_31640 98fc073afa100faa7b50d53b20ab0806 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 K04M3_31640 98fc073afa100faa7b50d53b20ab0806 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 381 4.7E-70 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 K04M3_31640 98fc073afa100faa7b50d53b20ab0806 397 SUPERFAMILY SSF103473 9 384 1.09E-57 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_31640 98fc073afa100faa7b50d53b20ab0806 397 Pfam PF07690 Major Facilitator Superfamily 16 352 4.5E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_31640 98fc073afa100faa7b50d53b20ab0806 397 Gene3D G3DSA:1.20.1720.10 12 385 2.7E-88 T 12-10-2018 K04M3_48760 d69f1166027b8aafffb41ae2f292d505 615 SUPERFAMILY SSF55486 3 550 3.79E-77 T 12-10-2018 K04M3_48760 d69f1166027b8aafffb41ae2f292d505 615 Pfam PF01432 Peptidase family M3 285 490 2.9E-16 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 K04M3_48760 d69f1166027b8aafffb41ae2f292d505 615 Pfam PF01432 Peptidase family M3 145 236 1.6E-4 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 K04M3_48760 d69f1166027b8aafffb41ae2f292d505 615 Gene3D G3DSA:1.10.1370.40 278 473 1.6E-12 T 12-10-2018 K04M3_48760 d69f1166027b8aafffb41ae2f292d505 615 Gene3D G3DSA:1.10.1370.10 85 246 7.7E-9 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 Gene3D G3DSA:3.40.50.970 350 548 2.4E-66 T 12-10-2018 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 5.6E-210 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 SUPERFAMILY SSF52467 182 341 9.27E-56 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.4E-48 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 SUPERFAMILY SSF52518 1 176 2.36E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 Gene3D G3DSA:3.40.50.1220 180 349 1.3E-52 T 12-10-2018 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.7E-40 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 SUPERFAMILY SSF52518 358 545 1.97E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 3.8E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 K04M3_32110 0bf7e4e875dfe147b7ab745264fdd09a 548 Gene3D G3DSA:3.40.50.970 1 174 3.5E-66 T 12-10-2018 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 SUPERFAMILY SSF55545 208 331 2.24E-23 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 SMART SM01081 34 195 3.3E-92 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Gene3D G3DSA:2.60.40.290 25 167 4.6E-56 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 SUPERFAMILY SSF81296 781 882 8.82E-37 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.2E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.5E-109 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 1.9E-62 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 SUPERFAMILY SSF49384 26 198 1.13E-65 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 1.6E-27 T 12-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Gene3D G3DSA:3.30.379.10 204 329 8.2E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.9E-13 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Gene3D G3DSA:2.60.40.10 818 882 1.1E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 Gene3D G3DSA:3.20.20.80 330 817 4.9E-164 T 12-10-2018 K04M3_07500 0254aed6d9935caddcbf1a57d9d528c6 883 SUPERFAMILY SSF51445 332 772 2.23E-143 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_18260 7b2d6138735551638fd2f5c11333c837 283 Gene3D G3DSA:3.30.420.10 121 279 3.8E-13 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_18260 7b2d6138735551638fd2f5c11333c837 283 Pfam PF13276 HTH-like domain 54 95 9.0E-7 T 12-10-2018 IPR025948 HTH-like domain K04M3_18260 7b2d6138735551638fd2f5c11333c837 283 SUPERFAMILY SSF53098 124 280 2.12E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_18260 7b2d6138735551638fd2f5c11333c837 283 Pfam PF00665 Integrase core domain 125 237 3.2E-29 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_18090 7b2d6138735551638fd2f5c11333c837 283 Gene3D G3DSA:3.30.420.10 121 279 3.8E-13 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_18090 7b2d6138735551638fd2f5c11333c837 283 Pfam PF13276 HTH-like domain 54 95 9.0E-7 T 12-10-2018 IPR025948 HTH-like domain K04M3_18090 7b2d6138735551638fd2f5c11333c837 283 SUPERFAMILY SSF53098 124 280 2.12E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_18090 7b2d6138735551638fd2f5c11333c837 283 Pfam PF00665 Integrase core domain 125 237 3.2E-29 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 SMART SM00363 20 77 7.0E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 Gene3D G3DSA:3.10.290.10 8 75 2.9E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 Gene3D G3DSA:3.30.2350.10 93 314 9.0E-79 T 12-10-2018 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 1.7E-92 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 SUPERFAMILY SSF55120 92 309 6.72E-64 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 Pfam PF01479 S4 domain 20 66 2.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 1.2E-31 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_21160 d67aed463e0443c67f63ec8999c70472 314 SUPERFAMILY SSF55174 19 71 4.27E-9 T 12-10-2018 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 PIRSF PIRSF000156 1 887 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 Gene3D G3DSA:3.40.50.920 707 887 2.2E-71 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 Gene3D G3DSA:3.40.50.970 473 706 3.3E-110 T 12-10-2018 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 SUPERFAMILY SSF52922 702 886 7.22E-59 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 SUPERFAMILY SSF52518 56 469 1.09E-139 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 1.8E-9 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 SUPERFAMILY SSF52518 475 701 3.65E-98 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_26230 676bf1fa1d4aeb29edc3e796cd13332a 887 Gene3D G3DSA:3.40.50.970 55 471 5.2E-133 T 12-10-2018 K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 626 9.0E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 7.3E-14 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 SMART SM00283 403 664 1.4E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 SUPERFAMILY SSF58104 361 665 2.49E-65 T 12-10-2018 K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 Pfam PF00672 HAMP domain 337 379 7.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 Gene3D G3DSA:1.10.287.950 335 666 4.5E-65 T 12-10-2018 K04M3_37510 64311526fdae721c7ed92a10c395fd1e 666 SMART SM00304 335 388 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 SMART SM00490 519 603 2.7E-17 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 7.8E-15 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 SUPERFAMILY SSF52540 273 653 6.99E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 9.5E-16 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Gene3D G3DSA:2.30.30.930 55 114 5.4E-26 T 12-10-2018 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Gene3D G3DSA:3.40.50.10810 150 430 1.8E-105 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 SMART SM00487 150 342 3.8E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 SUPERFAMILY SSF52540 127 377 1.7E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.146 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.2E-147 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Gene3D G3DSA:3.30.360.80 714 786 3.4E-30 T 12-10-2018 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Gene3D G3DSA:3.40.50.300 431 635 2.0E-47 T 12-10-2018 K04M3_28130 29d77bd1e8af8285e521d38f222e0805 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 12-10-2018 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 Pfam PF14842 FliG N-terminal domain 10 107 2.1E-22 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 Gene3D G3DSA:1.10.220.30 94 197 2.3E-22 T 12-10-2018 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 Gene3D G3DSA:1.10.220.30 200 333 2.1E-24 T 12-10-2018 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 Gene3D G3DSA:1.10.220.30 5 90 1.1E-17 T 12-10-2018 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 SUPERFAMILY SSF48029 120 328 1.44E-52 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 Pfam PF14841 FliG middle domain 121 194 1.2E-19 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 Pfam PF01706 FliG C-terminal domain 222 328 3.1E-24 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 8.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 8.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 8.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 8.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 8.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 8.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_34610 0b235c6ac959ae971089e03475fdeb2b 337 SUPERFAMILY SSF48029 12 112 1.96E-17 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 Gene3D G3DSA:1.20.1050.90 121 298 1.4E-82 T 12-10-2018 K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 5.3E-37 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.199 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 SUPERFAMILY SSF52540 1 344 1.44E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 1.1E-120 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 K04M3_00030 9f93f89d89da85d15cb1b449738bf67d 359 Gene3D G3DSA:3.40.50.300 8 332 1.4E-82 T 12-10-2018 K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 Gene3D G3DSA:3.30.70.270 290 451 2.2E-50 T 12-10-2018 K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 Pfam PF03924 CHASE domain 109 194 1.2E-14 T 12-10-2018 IPR006189 CHASE domain K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 SMART SM01079 47 223 4.4E-25 T 12-10-2018 IPR006189 CHASE domain K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 3.2E-43 T 12-10-2018 IPR000160 GGDEF domain K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 SUPERFAMILY SSF55073 299 451 4.16E-44 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 450 1.1E-46 T 12-10-2018 IPR000160 GGDEF domain K04M3_47800 b13d9afbf0a002c23b655f0b44d54e30 451 SMART SM00267 280 450 8.2E-48 T 12-10-2018 IPR000160 GGDEF domain K04M3_02470 35a15243452e433cfc6123f6353f257a 350 Gene3D G3DSA:3.40.630.30 10 132 4.7E-8 T 12-10-2018 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 205 6.7E-12 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 SMART SM00764 147 333 1.4E-120 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 SUPERFAMILY SSF55729 24 115 2.16E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_02470 35a15243452e433cfc6123f6353f257a 350 SUPERFAMILY SSF52374 146 336 4.07E-25 T 12-10-2018 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 PIRSF PIRSF005751 1 348 8.1E-132 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 336 5.0E-76 T 12-10-2018 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 1.8E-78 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 336 1.1E-131 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 K04M3_02470 35a15243452e433cfc6123f6353f257a 350 Gene3D G3DSA:3.40.50.620 145 324 7.6E-23 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.0E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 Gene3D G3DSA:3.50.50.60 9 312 5.3E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_12080 4767366400d540f89a4b6489c32738a7 319 Gene3D G3DSA:3.50.50.60 118 244 5.3E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_12080 4767366400d540f89a4b6489c32738a7 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.2E-45 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 SUPERFAMILY SSF51905 2 313 8.05E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_12080 4767366400d540f89a4b6489c32738a7 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.2E-123 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 12-10-2018 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 12-10-2018 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 12-10-2018 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 12-10-2018 K04M3_12080 4767366400d540f89a4b6489c32738a7 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 12-10-2018 K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 Pfam PF12848 ABC transporter 239 315 1.2E-16 T 12-10-2018 IPR032781 ABC-transporter extension domain K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 Gene3D G3DSA:3.40.50.300 296 533 2.7E-43 T 12-10-2018 K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 Gene3D G3DSA:3.40.50.300 11 291 2.6E-61 T 12-10-2018 K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 SMART SM00382 39 246 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 SMART SM00382 356 522 8.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 Pfam PF00005 ABC transporter 350 476 1.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 SUPERFAMILY SSF52540 18 249 5.84E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 SUPERFAMILY SSF52540 345 518 1.08E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_30270 0858acfaad1f3a7e1a2e402061b0779f 534 Pfam PF00005 ABC transporter 31 199 8.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SMART SM00357 23 79 5.6E-9 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Gene3D G3DSA:2.40.50.140 565 651 9.4E-33 T 12-10-2018 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 3.6E-181 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Pfam PF08206 Ribonuclease B OB domain 24 78 1.7E-16 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Gene3D G3DSA:2.40.50.140 1 82 1.9E-26 T 12-10-2018 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Gene3D G3DSA:2.40.50.640 83 157 4.4E-30 T 12-10-2018 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SMART SM00955 193 523 2.4E-112 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SUPERFAMILY SSF50249 186 563 5.48E-107 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SUPERFAMILY SSF50249 84 173 2.7E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SMART SM00316 566 650 0.0078 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Pfam PF00773 RNB domain 193 521 4.4E-85 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SUPERFAMILY SSF50249 8 80 6.52E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.147 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 SUPERFAMILY SSF50249 567 649 6.19E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_37940 2772ecb7eefb0aa3a904ccd91feb1f75 667 Pfam PF00575 S1 RNA binding domain 565 645 2.1E-9 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_02890 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02890 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02890 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02890 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02890 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02890 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_21960 33523762c5a8507409709cce613dcdda 616 SUPERFAMILY SSF52096 53 284 9.94E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_21960 33523762c5a8507409709cce613dcdda 616 Gene3D G3DSA:3.40.1750.10 186 497 2.7E-162 T 12-10-2018 K04M3_21960 33523762c5a8507409709cce613dcdda 616 PIRSF PIRSF001217 8 616 3.4E-228 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 K04M3_21960 33523762c5a8507409709cce613dcdda 616 SUPERFAMILY SSF52096 315 529 2.69E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_21960 33523762c5a8507409709cce613dcdda 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 1.5E-52 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 K04M3_21960 33523762c5a8507409709cce613dcdda 616 Pfam PF01343 Peptidase family S49 138 294 1.0E-30 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 K04M3_21960 33523762c5a8507409709cce613dcdda 616 Pfam PF01343 Peptidase family S49 391 541 3.6E-46 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 K04M3_21960 33523762c5a8507409709cce613dcdda 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 8.0E-193 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 K04M3_21960 33523762c5a8507409709cce613dcdda 616 Gene3D G3DSA:3.90.226.10 94 314 2.7E-162 T 12-10-2018 K04M3_21960 33523762c5a8507409709cce613dcdda 616 Gene3D G3DSA:3.90.226.10 315 540 2.7E-162 T 12-10-2018 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 1.1E-34 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 PIRSF PIRSF000077 39 142 3.3E-32 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 SUPERFAMILY SSF52833 27 143 1.06E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 Gene3D G3DSA:3.40.30.10 41 144 4.5E-32 T 12-10-2018 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 Gene3D G3DSA:2.20.28.140 2 37 9.0E-13 T 12-10-2018 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 Pfam PF00085 Thioredoxin 43 140 1.2E-27 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 12-10-2018 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 12-10-2018 K04M3_40160 7a5343c3386eb4812f9434f1676e2e05 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 12-10-2018 K04M3_06630 1663c40e7445a9207ffe3e639047b051 168 PIRSF PIRSF006162 6 167 2.6E-54 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 K04M3_06630 1663c40e7445a9207ffe3e639047b051 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.6E-52 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 K04M3_06630 1663c40e7445a9207ffe3e639047b051 168 SUPERFAMILY SSF101307 9 161 3.01E-48 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 7.9E-136 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 Pfam PF01235 Sodium:alanine symporter family 51 472 7.4E-150 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_06090 d0d4e600691986c99f70dfa65879a533 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_28440 1aba478b7e773b66d7b299f6f05cc71a 593 Pfam PF15864 Protein glycosylation ligase 174 199 9.2E-11 T 12-10-2018 IPR031726 Protein glycosylation ligase domain K04M3_28440 1aba478b7e773b66d7b299f6f05cc71a 593 Pfam PF04932 O-Antigen ligase 221 368 1.1E-12 T 12-10-2018 IPR007016 O-antigen ligase-related K04M3_28440 1aba478b7e773b66d7b299f6f05cc71a 593 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 6.3E-64 T 12-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 SUPERFAMILY SSF55874 309 444 2.23E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 7.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 Gene3D G3DSA:3.30.565.10 309 448 2.7E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 SUPERFAMILY SSF47384 224 287 1.18E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 SMART SM00387 342 448 4.6E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 Gene3D G3DSA:1.10.287.130 188 291 1.6E-7 T 12-10-2018 K04M3_11730 1968fac112dc4484bff8ea543128ebe8 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 446 6.4E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 Gene3D G3DSA:3.40.710.10 240 466 2.9E-52 T 12-10-2018 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 53 435 3.2E-97 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 436 6.3E-98 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 Gene3D G3DSA:3.50.80.20 79 173 2.6E-12 T 12-10-2018 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 7.8E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 7.8E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 7.8E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 7.8E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 7.8E-28 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_25760 2182fdc15fc2f7cee0ce27fbf0ce33f5 473 SUPERFAMILY SSF56601 51 457 2.26E-83 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_43380 bddc642b1509b0b9c322f98239f0b518 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 4.9E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_43380 bddc642b1509b0b9c322f98239f0b518 226 Gene3D G3DSA:2.60.120.10 18 144 7.7E-16 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_43380 bddc642b1509b0b9c322f98239f0b518 226 SUPERFAMILY SSF51206 21 143 4.71E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 Pfam PF02743 Cache domain 33 255 1.3E-34 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:3.30.450.20 62 173 4.8E-70 T 12-10-2018 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 SMART SM00304 292 346 2.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:1.10.287.950 291 623 7.0E-71 T 12-10-2018 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 SMART SM00283 361 622 1.1E-68 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 Gene3D G3DSA:3.30.450.20 49 265 4.8E-70 T 12-10-2018 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 589 1.0E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 Pfam PF00672 HAMP domain 292 343 1.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 SUPERFAMILY SSF58104 314 623 1.31E-74 T 12-10-2018 K04M3_37020 9e67df4dba4f246f50d882c40a87178a 623 SUPERFAMILY SSF103190 51 184 8.37E-18 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_45590 167a119651adf5fb0472d1da643b5f6b 212 SUPERFAMILY SSF109604 9 210 9.11E-63 T 12-10-2018 K04M3_45590 167a119651adf5fb0472d1da643b5f6b 212 Gene3D G3DSA:1.10.3210.50 3 212 7.7E-70 T 12-10-2018 K04M3_45590 167a119651adf5fb0472d1da643b5f6b 212 Pfam PF01966 HD domain 28 129 7.1E-14 T 12-10-2018 IPR006674 HD domain K04M3_45590 167a119651adf5fb0472d1da643b5f6b 212 SMART SM00471 22 139 4.1E-6 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_52430 69909ded3fd40735c1a1f32206082723 383 Gene3D G3DSA:3.90.980.10 2 154 9.0E-17 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily K04M3_52430 69909ded3fd40735c1a1f32206082723 383 Pfam PF08275 DNA primase catalytic core, N-terminal domain 26 165 5.9E-19 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal K04M3_52430 69909ded3fd40735c1a1f32206082723 383 Gene3D G3DSA:3.40.1360.10 155 280 1.6E-23 T 12-10-2018 K04M3_52430 69909ded3fd40735c1a1f32206082723 383 Pfam PF13155 Toprim-like 177 235 8.1E-7 T 12-10-2018 K04M3_52430 69909ded3fd40735c1a1f32206082723 383 SMART SM00493 173 244 0.0066 T 12-10-2018 IPR006171 TOPRIM domain K04M3_52430 69909ded3fd40735c1a1f32206082723 383 SUPERFAMILY SSF56731 11 291 3.66E-46 T 12-10-2018 K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 SMART SM00052 349 593 1.2E-74 T 12-10-2018 IPR001633 EAL domain K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 SMART SM00267 166 330 6.3E-27 T 12-10-2018 IPR000160 GGDEF domain K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 9.6E-28 T 12-10-2018 IPR000160 GGDEF domain K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 Gene3D G3DSA:3.30.70.270 171 343 1.5E-35 T 12-10-2018 K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 Pfam PF00563 EAL domain 353 588 3.0E-61 T 12-10-2018 IPR001633 EAL domain K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 SUPERFAMILY SSF55073 182 332 2.28E-31 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 2.5E-26 T 12-10-2018 IPR000160 GGDEF domain K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 Gene3D G3DSA:3.20.20.450 344 606 1.8E-73 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 SUPERFAMILY SSF55781 23 135 5.43E-5 T 12-10-2018 K04M3_37080 c0eacba5e3a50f6088d135615c8ad537 606 SUPERFAMILY SSF141868 358 601 4.58E-71 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_19340 2e27c98b8a0b245b1c895210685c412e 320 Gene3D G3DSA:1.10.150.130 1 94 2.7E-27 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_19340 2e27c98b8a0b245b1c895210685c412e 320 SUPERFAMILY SSF56349 99 315 7.36E-47 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_19340 2e27c98b8a0b245b1c895210685c412e 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 9.9E-23 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 K04M3_19340 2e27c98b8a0b245b1c895210685c412e 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 8.0E-152 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 K04M3_19340 2e27c98b8a0b245b1c895210685c412e 320 Pfam PF00589 Phage integrase family 105 305 6.0E-43 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_19340 2e27c98b8a0b245b1c895210685c412e 320 Gene3D G3DSA:1.10.443.10 97 310 1.0E-67 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 SUPERFAMILY SSF52402 189 412 6.84E-58 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 3.8E-7 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.8E-7 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 3.8E-7 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.5E-6 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.5E-6 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.5E-6 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Gene3D G3DSA:3.40.50.880 6 201 2.9E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.4E-6 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.4E-6 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.4E-6 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 3.8E-43 T 12-10-2018 IPR017926 Glutamine amidotransferase K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.379 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Gene3D G3DSA:3.30.300.10 398 517 1.0E-50 T 12-10-2018 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 SUPERFAMILY SSF52317 5 196 3.32E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Pfam PF02540 NAD synthase 212 285 1.0E-7 T 12-10-2018 IPR022310 NAD/GMP synthase K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.9E-156 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 Gene3D G3DSA:3.40.50.620 202 397 4.0E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_05910 229d653a38e5388dada3edf15a0afbf7 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-83 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 Gene3D G3DSA:3.30.70.20 95 158 1.2E-9 T 12-10-2018 K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 Gene3D G3DSA:3.30.70.20 29 81 4.1E-10 T 12-10-2018 K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 16 154 2.6E-43 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.904 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 9.9E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 Pfam PF12838 4Fe-4S dicluster domain 35 78 6.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_45060 5142ec24d007d70a2e52ecf364a1d99d 161 SUPERFAMILY SSF54862 32 156 1.26E-18 T 12-10-2018 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 SUPERFAMILY SSF48179 191 343 4.08E-56 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 Gene3D G3DSA:3.40.50.720 2 199 6.1E-51 T 12-10-2018 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 1.7E-45 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.023 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 Gene3D G3DSA:1.10.1040.10 201 345 1.7E-53 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 6.6E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 6.6E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 6.6E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 6.6E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 6.6E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 6.6E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 SUPERFAMILY SSF51735 16 190 2.11E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 PIRSF PIRSF000114 10 344 1.8E-95 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_29780 c77c97665215dcc876fa51d7354bbaf9 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 2.7E-52 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 K04M3_24670 32ec87fed0c437bd95e9c30ea7a6102f 198 PIRSF PIRSF006102 1 198 3.8E-66 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_24670 32ec87fed0c437bd95e9c30ea7a6102f 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.0E-59 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_24670 32ec87fed0c437bd95e9c30ea7a6102f 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.95 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 K04M3_24670 32ec87fed0c437bd95e9c30ea7a6102f 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.6E-108 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 Pfam PF00571 CBS domain 345 393 1.4E-6 T 12-10-2018 IPR000644 CBS domain K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 Gene3D G3DSA:3.10.580.10 297 395 1.7E-8 T 12-10-2018 K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 SUPERFAMILY SSF54631 274 392 1.7E-15 T 12-10-2018 K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 SMART SM00382 53 242 3.2E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 Gene3D G3DSA:3.40.50.300 34 296 1.0E-80 T 12-10-2018 K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 SUPERFAMILY SSF52540 43 271 1.93E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 Pfam PF00005 ABC transporter 45 192 8.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 3.4E-150 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 K04M3_14630 65a29a7d0fc25a91abf14fca3a7ac613 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Gene3D G3DSA:3.40.50.720 467 811 1.2E-120 T 12-10-2018 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Gene3D G3DSA:1.20.120.1320 41 142 1.3E-87 T 12-10-2018 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.0E-26 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 SUPERFAMILY SSF55347 614 797 1.77E-51 T 12-10-2018 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 SUPERFAMILY SSF53633 1 298 7.27E-78 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Pfam PF01842 ACT domain 324 379 6.6E-10 T 12-10-2018 IPR002912 ACT domain K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 PIRSF PIRSF000727 1 817 0.0 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 SUPERFAMILY SSF51735 463 636 7.09E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Pfam PF00696 Amino acid kinase family 2 284 1.9E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Pfam PF13840 ACT domain 393 456 1.6E-7 T 12-10-2018 IPR027795 CASTOR, ACT domain K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.8E-133 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Gene3D G3DSA:3.30.360.10 625 795 1.2E-120 T 12-10-2018 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.9E-47 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Gene3D G3DSA:3.30.2130.10 302 464 5.0E-46 T 12-10-2018 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 Gene3D G3DSA:3.40.1160.10 3 295 1.3E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 SUPERFAMILY SSF55021 383 476 3.72E-22 T 12-10-2018 K04M3_04630 655ae4f7a929102d3b9e78c16588479a 819 SUPERFAMILY SSF55021 303 381 1.15E-22 T 12-10-2018 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 Pfam PF02378 Phosphotransferase system, EIIC 114 414 1.1E-49 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 32 114 1.8E-23 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 23 40 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 Gene3D G3DSA:3.30.1360.60 3 82 8.5E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 SUPERFAMILY SSF55604 10 86 1.83E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 168 457 1.0E-94 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 Pfam PF00367 phosphotransferase system, EIIB 12 45 1.0E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_45910 a9ddc71f1f63b098750d9fb0487567f1 483 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 6 468 2.6E-196 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 2.3E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.9E-34 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_09150 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 Gene3D G3DSA:1.10.1660.10 1 129 3.1E-35 T 12-10-2018 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 Pfam PF09278 MerR, DNA binding 47 109 1.4E-16 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 SMART SM00422 2 71 5.4E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.0E-66 T 12-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 Pfam PF00376 MerR family regulatory protein 4 40 5.4E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 SUPERFAMILY SSF46955 2 121 3.22E-33 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.4E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.4E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_30400 0d0c59b0151907b71b44bd23bb9d17a2 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.4E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_39200 257bc960bcf1c7a43b5d8b7ba405ded3 126 Gene3D G3DSA:3.10.450.10 35 119 2.0E-7 T 12-10-2018 K04M3_39200 257bc960bcf1c7a43b5d8b7ba405ded3 126 Pfam PF00031 Cystatin domain 47 108 3.3E-5 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 K04M3_39200 257bc960bcf1c7a43b5d8b7ba405ded3 126 SUPERFAMILY SSF54403 42 112 1.29E-13 T 12-10-2018 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-106 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF55681 92 327 1.73E-82 T 12-10-2018 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.1E-25 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF46589 14 99 1.62E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.925 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 Gene3D G3DSA:3.30.930.10 8 327 2.2E-126 T 12-10-2018 K04M3_12470 d15f2739bb2236d42ac972bc7da1c78a 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.8E-111 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 Gene3D G3DSA:3.40.190.10 160 265 9.6E-17 T 12-10-2018 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 Pfam PF03466 LysR substrate binding domain 88 292 9.8E-27 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 SUPERFAMILY SSF46785 2 110 1.0E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 SUPERFAMILY SSF53850 89 292 5.61E-29 T 12-10-2018 K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 Gene3D G3DSA:1.10.10.10 5 69 4.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_48050 a9598c14ea7d10b3bf343150f758cfa1 299 Gene3D G3DSA:3.40.190.10 112 287 9.6E-17 T 12-10-2018 K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 SUPERFAMILY SSF103190 185 267 5.49E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 SUPERFAMILY SSF55073 372 520 2.82E-43 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 Gene3D G3DSA:3.30.70.270 361 523 5.0E-50 T 12-10-2018 K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 Pfam PF02743 Cache domain 49 268 7.3E-23 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 364 520 6.7E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 SMART SM00267 356 521 4.3E-52 T 12-10-2018 IPR000160 GGDEF domain K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 368 517 9.2E-42 T 12-10-2018 IPR000160 GGDEF domain K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 Gene3D G3DSA:3.30.450.20 161 282 1.9E-14 T 12-10-2018 K04M3_14880 87e2d2a70170c784a8342ddc269337d6 525 SUPERFAMILY SSF103190 85 183 4.71E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 SUPERFAMILY SSF52540 31 262 7.45E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 SMART SM00382 47 240 1.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 309 1.7E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 Gene3D G3DSA:3.40.50.300 8 331 1.3E-96 T 12-10-2018 K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 Pfam PF00005 ABC transporter 39 190 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_21430 8def6bcc2b72a7ba70a1484a06ac99d2 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 4.6E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 27 34 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 SUPERFAMILY SSF53067 230 494 3.1E-26 T 12-10-2018 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 SUPERFAMILY SSF53067 23 216 9.97E-27 T 12-10-2018 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 Gene3D G3DSA:3.30.420.40 25 222 4.6E-35 T 12-10-2018 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 Pfam PF00012 Hsp70 protein 25 349 1.5E-15 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 235 248 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 Gene3D G3DSA:3.30.420.40 228 270 4.6E-35 T 12-10-2018 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 Gene3D G3DSA:3.90.640.10 271 350 4.6E-35 T 12-10-2018 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 PRINTS PR00301 70kDa heat shock protein signature 241 251 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 PRINTS PR00301 70kDa heat shock protein signature 23 36 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_15230 e62520476199b4f5c3bac3684ae35496 653 PRINTS PR00301 70kDa heat shock protein signature 174 194 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Gene3D G3DSA:1.10.8.10 16 106 1.2E-5 T 12-10-2018 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 1.3E-97 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 PIRSF PIRSF037167 2 307 1.7E-150 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Pfam PF05175 Methyltransferase small domain 134 216 6.5E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Gene3D G3DSA:3.40.50.150 109 283 3.1E-46 T 12-10-2018 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.26 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 SUPERFAMILY SSF53335 16 294 1.64E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_22400 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 5.8E-139 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.982 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.2E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 Gene3D G3DSA:1.20.1440.90 273 387 2.8E-27 T 12-10-2018 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 6.0E-289 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 SUPERFAMILY SSF51621 6 877 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_29010 de4ae04a33111024c3fd3c739274a84a 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 K04M3_06480 9c1fcb39b36ab71653ae9e3c20914281 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 3.1E-42 T 12-10-2018 IPR021768 Protein of unknown function DUF3332 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 SUPERFAMILY SSF55424 355 474 2.06E-24 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 4.3E-19 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.3E-19 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 4.3E-19 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 4.3E-19 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 4.3E-19 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 Gene3D G3DSA:3.50.50.60 147 275 1.9E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 Gene3D G3DSA:3.30.390.30 353 476 2.9E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.3E-40 T 12-10-2018 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 PIRSF PIRSF000350 1 473 1.0E-60 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 1.1E-16 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 Gene3D G3DSA:1.10.287.990 37 107 1.9E-94 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 SUPERFAMILY SSF51905 1 373 8.48E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 333 8.6E-43 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_28930 5c8bcbb0899948148d5d50e440abc43d 490 Gene3D G3DSA:3.50.50.60 7 336 1.9E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_16830 c736185f9173080f59ac2ea3d9c00104 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_16830 c736185f9173080f59ac2ea3d9c00104 244 Gene3D G3DSA:3.40.50.300 3 244 3.0E-74 T 12-10-2018 K04M3_16830 c736185f9173080f59ac2ea3d9c00104 244 SUPERFAMILY SSF52540 4 239 6.46E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16830 c736185f9173080f59ac2ea3d9c00104 244 Pfam PF00005 ABC transporter 21 169 5.1E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_16830 c736185f9173080f59ac2ea3d9c00104 244 PIRSF PIRSF039085 1 244 4.7E-109 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 K04M3_16830 c736185f9173080f59ac2ea3d9c00104 244 SMART SM00382 30 217 1.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 2.3E-151 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 Pfam PF01235 Sodium:alanine symporter family 54 449 2.7E-137 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.7E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.7E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.7E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.7E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.7E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_14550 84bacb824549acdc37d4ca44ab50403f 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 2.7E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_41890 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 Gene3D G3DSA:2.30.30.40 115 185 9.3E-24 T 12-10-2018 K04M3_41890 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 SMART SM00782 6 52 2.4E-28 T 12-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial K04M3_41890 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 2.9E-10 T 12-10-2018 IPR013987 PhnA protein, N-terminal K04M3_41890 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 Pfam PF03831 PhnA domain 119 184 2.6E-22 T 12-10-2018 IPR013988 PhnA protein, C-terminal K04M3_41890 c8b6b6c21f33d8cc278b3d1f0b94fc8c 185 SUPERFAMILY SSF82057 117 184 3.85E-20 T 12-10-2018 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.4E-33 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 1.9E-21 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Pfam PF07196 Flagellin hook IN motif 200 245 1.3E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Gene3D G3DSA:1.20.1330.10 44 165 3.2E-57 T 12-10-2018 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Gene3D G3DSA:1.10.8.410 326 374 6.4E-17 T 12-10-2018 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Gene3D G3DSA:1.20.58.1830 5 32 3.2E-57 T 12-10-2018 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 PRINTS PR00207 Flagellin signature 110 133 3.0E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 PRINTS PR00207 Flagellin signature 36 53 3.0E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 PRINTS PR00207 Flagellin signature 75 94 3.0E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 SUPERFAMILY SSF64518 1 373 3.79E-76 T 12-10-2018 K04M3_07810 5acea2859a39e96efd8c677b24846379 374 Gene3D G3DSA:1.20.1330.10 184 325 2.2E-10 T 12-10-2018 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.2E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 8.2E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Gene3D G3DSA:2.40.30.10 203 303 1.7E-33 T 12-10-2018 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Gene3D G3DSA:2.40.50.250 487 603 6.9E-130 T 12-10-2018 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Gene3D G3DSA:3.30.70.240 393 486 6.9E-130 T 12-10-2018 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.2E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Gene3D G3DSA:3.40.50.300 5 202 2.1E-68 T 12-10-2018 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 SUPERFAMILY SSF52540 5 211 1.57E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 Gene3D G3DSA:3.30.70.870 310 594 6.9E-130 T 12-10-2018 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 3.0E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 3.5E-294 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 SUPERFAMILY SSF50447 155 303 2.7E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 SUPERFAMILY SSF54980 402 516 2.06E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_01080 ea79f238fa388b28c28c47089f371bab 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 SUPERFAMILY SSF51161 8 258 7.37E-63 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 6.0E-37 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Gene3D G3DSA:1.10.3130.10 1 142 2.9E-52 T 12-10-2018 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 PIRSF PIRSF000441 75 266 3.7E-55 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 PIRSF PIRSF000441 7 84 66.0 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 Gene3D G3DSA:2.160.10.10 143 273 4.0E-37 T 12-10-2018 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 SMART SM00971 9 113 4.4E-58 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 K04M3_29790 d5d235b9c95588bf74ce0f6a8903c8a9 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-74 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 K04M3_45600 8413071ab75ccf213b317a664796528f 252 SUPERFAMILY SSF47413 5 68 8.23E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_45600 8413071ab75ccf213b317a664796528f 252 Gene3D G3DSA:1.10.260.40 3 70 6.3E-6 T 12-10-2018 K04M3_45600 8413071ab75ccf213b317a664796528f 252 SMART SM00530 10 65 1.8E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_45600 8413071ab75ccf213b317a664796528f 252 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 8.3E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.716 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 Gene3D G3DSA:1.10.8.10 6 90 1.9E-27 T 12-10-2018 K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 Gene3D G3DSA:3.40.50.150 91 282 5.7E-59 T 12-10-2018 K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 Pfam PF13847 Methyltransferase domain 117 249 2.5E-18 T 12-10-2018 IPR025714 Methyltransferase domain K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 3.9E-82 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 SUPERFAMILY SSF53335 7 279 7.34E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_07380 a7cafb81316d9069f6cdc62a2a98f84c 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 2.8E-94 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.3E-28 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.0E-17 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Gene3D G3DSA:3.40.120.10 221 318 4.3E-45 T 12-10-2018 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Gene3D G3DSA:3.40.120.10 12 218 3.8E-75 T 12-10-2018 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 2.1E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Gene3D G3DSA:3.30.310.50 443 546 3.9E-35 T 12-10-2018 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 2.1E-8 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 12-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 SUPERFAMILY SSF53738 27 235 4.24E-52 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 Gene3D G3DSA:3.40.120.10 319 442 1.2E-34 T 12-10-2018 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 SUPERFAMILY SSF55957 433 543 2.79E-20 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 SUPERFAMILY SSF53738 305 446 8.24E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 SUPERFAMILY SSF53738 209 317 1.77E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_08340 a40466433fbdb5361033d91d7bbda61b 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_16020 45255bcc83c401f0b40272cdf69a7de0 286 Gene3D G3DSA:1.10.3720.10 7 278 7.6E-54 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16020 45255bcc83c401f0b40272cdf69a7de0 286 SUPERFAMILY SSF161098 10 275 4.19E-54 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16020 45255bcc83c401f0b40272cdf69a7de0 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 1.1E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_24680 2ffa4f8d439b6b066f330204fe031a91 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 2.9E-109 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 K04M3_24680 2ffa4f8d439b6b066f330204fe031a91 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.0E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_24680 2ffa4f8d439b6b066f330204fe031a91 210 PIRSF PIRSF006102 3 210 6.4E-73 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_24680 2ffa4f8d439b6b066f330204fe031a91 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.836 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 K04M3_04550 eb1ed47e942b38e6730547413068d6f4 319 Pfam PF04055 Radical SAM superfamily 43 202 2.6E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_04550 eb1ed47e942b38e6730547413068d6f4 319 Gene3D G3DSA:3.80.30.20 42 298 1.9E-17 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe K04M3_04550 eb1ed47e942b38e6730547413068d6f4 319 SMART SM00729 23 247 6.2E-46 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_04550 eb1ed47e942b38e6730547413068d6f4 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 2.3E-17 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 K04M3_04550 eb1ed47e942b38e6730547413068d6f4 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 5.1E-135 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 K04M3_04550 eb1ed47e942b38e6730547413068d6f4 319 SUPERFAMILY SSF102114 13 268 6.54E-49 T 12-10-2018 K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 Gene3D G3DSA:1.10.10.10 119 221 4.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 Gene3D G3DSA:3.40.50.2300 1 118 4.2E-34 T 12-10-2018 K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 3.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 SUPERFAMILY SSF46894 140 215 7.09E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 SMART SM00448 2 112 1.7E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 SMART SM00862 139 215 5.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 SUPERFAMILY SSF52172 2 129 1.85E-38 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_48340 a30f46975a71af409f1da264c1eae1c5 221 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_44000 0b3b55ba2e4c04468ae0c8f93517ed06 198 Gene3D G3DSA:3.40.50.150 2 198 8.9E-40 T 12-10-2018 K04M3_44000 0b3b55ba2e4c04468ae0c8f93517ed06 198 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 8 195 6.6E-30 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 K04M3_44000 0b3b55ba2e4c04468ae0c8f93517ed06 198 SUPERFAMILY SSF53335 5 197 6.91E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_08970 4bd0c13fe6a38c3d0646f813b3216b1a 246 Pfam PF01464 Transglycosylase SLT domain 99 152 6.6E-5 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_08970 4bd0c13fe6a38c3d0646f813b3216b1a 246 Gene3D G3DSA:1.10.530.10 65 199 3.0E-8 T 12-10-2018 K04M3_08970 4bd0c13fe6a38c3d0646f813b3216b1a 246 SUPERFAMILY SSF53955 72 195 4.03E-12 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_37590 0077c46d3e9b65fa2f698b98906b216d 300 Pfam PF00892 EamA-like transporter family 160 287 1.3E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_37590 0077c46d3e9b65fa2f698b98906b216d 300 SUPERFAMILY SSF103481 194 290 2.88E-7 T 12-10-2018 K04M3_37590 0077c46d3e9b65fa2f698b98906b216d 300 SUPERFAMILY SSF103481 48 141 8.24E-5 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 15 436 3.1E-108 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Gene3D G3DSA:1.10.287.470 218 293 6.8E-17 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Gene3D G3DSA:1.10.287.470 87 175 2.4E-9 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 3.6E-28 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_14810 7485b895de562f5baab059b43113dfac 436 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 415 3.6E-28 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_14810 7485b895de562f5baab059b43113dfac 436 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 3.6E-28 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_14810 7485b895de562f5baab059b43113dfac 436 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 327 3.6E-28 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_14810 7485b895de562f5baab059b43113dfac 436 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 415 435 3.6E-28 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Gene3D G3DSA:2.40.50.100 294 330 6.8E-17 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Gene3D G3DSA:2.40.50.100 52 86 2.4E-9 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Pfam PF13437 HlyD family secretion protein 294 395 1.3E-18 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Gene3D G3DSA:2.40.30.170 331 413 6.8E-17 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 Gene3D G3DSA:2.40.30.170 41 51 2.4E-9 T 12-10-2018 K04M3_14810 7485b895de562f5baab059b43113dfac 436 ProSitePatterns PS00543 HlyD family secretion proteins signature. 400 422 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 K04M3_33000 4c15ed12b3d5583a8ffab5e9de954ea7 140 Pfam PF02566 OsmC-like protein 38 133 3.8E-18 T 12-10-2018 IPR003718 OsmC/Ohr family K04M3_33000 4c15ed12b3d5583a8ffab5e9de954ea7 140 Gene3D G3DSA:3.30.300.20 44 140 2.6E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_33000 4c15ed12b3d5583a8ffab5e9de954ea7 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 2.2E-52 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 K04M3_33000 4c15ed12b3d5583a8ffab5e9de954ea7 140 SUPERFAMILY SSF82784 1 135 2.75E-42 T 12-10-2018 IPR036102 OsmC/Ohr superfamily K04M3_33000 4c15ed12b3d5583a8ffab5e9de954ea7 140 Gene3D G3DSA:2.20.25.10 1 43 1.6E-21 T 12-10-2018 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.4E-16 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.4E-16 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 Pfam PF01197 Ribosomal protein L31 1 79 2.8E-27 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 Gene3D G3DSA:2.30.170.50 1 84 2.6E-24 T 12-10-2018 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 SUPERFAMILY SSF143800 1 81 5.1E-23 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 28.901 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_24180 5b03fb0843b858fd0a7b97155c3210d7 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.0E-18 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_33170 5f1b0818aa7f563196401809f16b7000 609 Pfam PF04183 IucA / IucC family 163 383 1.8E-51 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 K04M3_33170 5f1b0818aa7f563196401809f16b7000 609 Gene3D G3DSA:1.10.150.640 26 149 1.5E-5 T 12-10-2018 K04M3_33170 5f1b0818aa7f563196401809f16b7000 609 Gene3D G3DSA:1.10.340.60 497 567 4.0E-20 T 12-10-2018 K04M3_33170 5f1b0818aa7f563196401809f16b7000 609 Gene3D G3DSA:3.10.450.440 45 111 1.5E-5 T 12-10-2018 K04M3_33170 5f1b0818aa7f563196401809f16b7000 609 Pfam PF06276 Ferric iron reductase FhuF-like transporter 430 588 1.9E-27 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain K04M3_28430 84769990870f8bf533050ae433b664a8 940 Gene3D G3DSA:1.20.1580.10 691 829 1.0E-140 T 12-10-2018 K04M3_28430 84769990870f8bf533050ae433b664a8 940 Gene3D G3DSA:3.40.50.300 6 593 6.8E-246 T 12-10-2018 K04M3_28430 84769990870f8bf533050ae433b664a8 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_28430 84769990870f8bf533050ae433b664a8 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.938 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 K04M3_28430 84769990870f8bf533050ae433b664a8 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 K04M3_28430 84769990870f8bf533050ae433b664a8 940 SUPERFAMILY SSF52540 620 912 3.51E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28430 84769990870f8bf533050ae433b664a8 940 Gene3D G3DSA:3.30.190.20 130 243 6.8E-246 T 12-10-2018 K04M3_28430 84769990870f8bf533050ae433b664a8 940 Gene3D G3DSA:1.20.1580.10 90 491 6.8E-246 T 12-10-2018 K04M3_28430 84769990870f8bf533050ae433b664a8 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_28430 84769990870f8bf533050ae433b664a8 940 Gene3D G3DSA:3.40.50.300 616 935 1.0E-140 T 12-10-2018 K04M3_28430 84769990870f8bf533050ae433b664a8 940 Gene3D G3DSA:1.10.8.280 286 402 6.8E-246 T 12-10-2018 K04M3_28430 84769990870f8bf533050ae433b664a8 940 Pfam PF00005 ABC transporter 622 859 2.1E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_28430 84769990870f8bf533050ae433b664a8 940 SUPERFAMILY SSF52540 4 568 7.94E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 SUPERFAMILY SSF55424 337 451 4.3E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 3.0E-215 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PIRSF PIRSF000350 1 445 1.7E-82 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.6E-64 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 SUPERFAMILY SSF51905 1 365 5.4E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 Gene3D G3DSA:3.50.50.60 144 261 2.3E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 Gene3D G3DSA:3.30.390.30 339 451 2.2E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.9E-70 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 Gene3D G3DSA:3.50.50.60 5 315 2.3E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.1E-29 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-29 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.1E-29 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.1E-29 T 12-10-2018 K04M3_00580 7c2c4e519e040725894a568c85d259e6 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-29 T 12-10-2018 K04M3_42700 c3f0289212cb30df87a90908985a37dd 156 Pfam PF08808 RES domain 2 151 8.4E-26 T 12-10-2018 IPR014914 RES domain K04M3_42700 c3f0289212cb30df87a90908985a37dd 156 SMART SM00953 15 143 2.1E-15 T 12-10-2018 IPR014914 RES domain K04M3_27680 8990934139f499e32baccd304fecf7dd 101 Gene3D G3DSA:3.40.50.2300 2 101 2.4E-39 T 12-10-2018 K04M3_27680 8990934139f499e32baccd304fecf7dd 101 SUPERFAMILY SSF52794 1 101 7.85E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 K04M3_27680 8990934139f499e32baccd304fecf7dd 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 2.2E-25 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 K04M3_21130 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_21130 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_21130 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_21130 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 Gene3D G3DSA:3.40.190.10 182 280 4.2E-59 T 12-10-2018 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 Gene3D G3DSA:3.40.190.10 94 304 4.2E-59 T 12-10-2018 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 SUPERFAMILY SSF53850 92 306 2.53E-48 T 12-10-2018 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 Gene3D G3DSA:1.10.10.10 2 89 2.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 Pfam PF03466 LysR substrate binding domain 97 308 3.1E-29 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 SUPERFAMILY SSF46785 7 86 1.59E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_31650 43008f5159aca7ce1d31917968e6f78b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Hamap MF_01113 DNA polymerase IV [dinB]. 2 349 36.014 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 SUPERFAMILY SSF56672 3 235 2.4E-88 T 12-10-2018 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 346 5.8E-8 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Gene3D G3DSA:3.30.70.270 5 165 7.9E-62 T 12-10-2018 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Gene3D G3DSA:2.30.40.20 22 74 7.9E-62 T 12-10-2018 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Gene3D G3DSA:1.10.150.20 167 229 1.8E-12 T 12-10-2018 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Pfam PF00817 impB/mucB/samB family 8 155 3.0E-47 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 SUPERFAMILY SSF100879 242 349 1.31E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_24330 b9bb28f52a228e829383cb37ec82b6ee 350 Gene3D G3DSA:3.30.1490.100 238 350 1.4E-26 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:3.30.2090.10 706 796 6.8E-267 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:1.20.1640.10 10 508 6.8E-267 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 SUPERFAMILY SSF82866 292 491 1.83E-37 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:3.30.70.1430 40 804 6.8E-267 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 SUPERFAMILY SSF82693 41 135 4.36E-20 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 SUPERFAMILY SSF82866 795 1015 8.11E-44 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 9.0E-179 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:1.20.1640.10 509 1008 6.8E-267 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:3.30.70.1440 655 856 6.8E-267 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:3.30.70.1320 135 328 6.8E-267 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 SUPERFAMILY SSF82714 712 788 1.26E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 SUPERFAMILY SSF82693 136 325 1.94E-21 T 12-10-2018 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 SUPERFAMILY SSF82714 185 266 3.66E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:3.30.2090.10 179 270 6.8E-267 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.7E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.7E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.7E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.7E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_42290 a1dedf82bf9977f11a3397648a8d618d 1019 Gene3D G3DSA:3.30.70.1430 556 654 6.8E-267 T 12-10-2018 K04M3_34900 cbf6399185b304e7030f8bde4cf8dc36 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 3.3E-53 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain K04M3_34900 cbf6399185b304e7030f8bde4cf8dc36 239 Gene3D G3DSA:3.10.200.10 22 237 1.1E-84 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily K04M3_34900 cbf6399185b304e7030f8bde4cf8dc36 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 K04M3_34900 cbf6399185b304e7030f8bde4cf8dc36 239 SUPERFAMILY SSF51069 22 236 5.76E-75 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily K04M3_34900 cbf6399185b304e7030f8bde4cf8dc36 239 SMART SM01057 23 239 6.8E-99 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain K04M3_45260 2d536b3cdeec679ffa4c12f76a0a1c80 220 Gene3D G3DSA:2.40.10.220 113 215 2.8E-6 T 12-10-2018 K04M3_45260 2d536b3cdeec679ffa4c12f76a0a1c80 220 SUPERFAMILY SSF141371 3 115 8.63E-30 T 12-10-2018 K04M3_45260 2d536b3cdeec679ffa4c12f76a0a1c80 220 Pfam PF07238 PilZ domain 113 205 5.8E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 K04M3_45260 2d536b3cdeec679ffa4c12f76a0a1c80 220 Pfam PF12945 Flagellar protein YcgR 15 105 7.4E-13 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal K04M3_45260 2d536b3cdeec679ffa4c12f76a0a1c80 220 SUPERFAMILY SSF141371 116 217 2.16E-16 T 12-10-2018 K04M3_45260 2d536b3cdeec679ffa4c12f76a0a1c80 220 Gene3D G3DSA:2.30.110.10 3 112 8.9E-11 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 Pfam PF00664 ABC transporter transmembrane region 24 292 2.2E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 Gene3D G3DSA:3.40.50.300 343 593 1.5E-64 T 12-10-2018 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 Gene3D G3DSA:1.20.1560.10 1 334 8.5E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 SUPERFAMILY SSF90123 5 333 5.23E-59 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 Pfam PF00005 ABC transporter 369 512 9.7E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 SMART SM00382 375 594 5.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_12070 6428426572a420543e4e8040b5397a2e 595 SUPERFAMILY SSF52540 349 581 8.54E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12070 6428426572a420543e4e8040b5397a2e 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_12070 6428426572a420543e4e8040b5397a2e 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 9.5E-179 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 12-10-2018 IPR033135 ClpP, histidine active site K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 Gene3D G3DSA:3.90.226.10 4 207 1.1E-84 T 12-10-2018 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 12-10-2018 IPR018215 ClpP, Ser active site K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 5.2E-107 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 SUPERFAMILY SSF52096 23 206 3.63E-75 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.387 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 6.8E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 6.8E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 6.8E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 6.8E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 6.8E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 K04M3_09120 b52bc18512aab65c8a8a1e2ea15e4227 208 Pfam PF00574 Clp protease 25 205 2.4E-89 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 SUPERFAMILY SSF53822 66 334 1.2E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:1.10.260.40 1 64 1.6E-22 T 12-10-2018 K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:3.40.50.2300 158 334 3.6E-42 T 12-10-2018 K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 Gene3D G3DSA:3.40.50.2300 65 154 1.5E-11 T 12-10-2018 K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 SUPERFAMILY SSF47413 7 65 6.43E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 SMART SM00354 7 77 1.3E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 Pfam PF13377 Periplasmic binding protein-like domain 174 333 1.3E-28 T 12-10-2018 K04M3_33360 16bd800b96afa3a6a2a596d37f0075cc 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 6.7E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_17540 7b21869bc032a4215013f43aac5a2cb7 142 SUPERFAMILY SSF69635 3 127 1.57E-48 T 12-10-2018 K04M3_17540 7b21869bc032a4215013f43aac5a2cb7 142 Gene3D G3DSA:3.30.1460.10 2 128 3.7E-27 T 12-10-2018 K04M3_17540 7b21869bc032a4215013f43aac5a2cb7 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 5.3E-48 T 12-10-2018 IPR013353 Type III secretion system chaperone YscB K04M3_17540 7b21869bc032a4215013f43aac5a2cb7 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 121 1.2E-19 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 Gene3D G3DSA:3.30.2010.10 86 158 1.2E-6 T 12-10-2018 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 14 493 39.746 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 Pfam PF14559 Tetratricopeptide repeat 362 426 2.9E-9 T 12-10-2018 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 SUPERFAMILY SSF48452 321 464 5.48E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 SMART SM00028 351 384 21.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 SMART SM00028 317 350 24.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 SMART SM00028 436 469 190.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 Gene3D G3DSA:1.25.40.10 320 489 6.0E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_23560 e8273f865b4b608f91b28b495530152d 494 Pfam PF01435 Peptidase family M48 80 262 1.8E-27 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 K04M3_30510 5f0217f10d7c57a625cce6579d401707 161 Gene3D G3DSA:1.20.120.1370 1 154 3.3E-50 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily K04M3_30510 5f0217f10d7c57a625cce6579d401707 161 PIRSF PIRSF016548 1 161 2.4E-67 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 K04M3_30510 5f0217f10d7c57a625cce6579d401707 161 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 151 4.4E-54 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 K04M3_42690 27f453d7f40a8289b1150939df9a8912 616 Gene3D G3DSA:3.40.50.1110 404 607 2.3E-5 T 12-10-2018 IPR036514 SGNH hydrolase superfamily K04M3_42690 27f453d7f40a8289b1150939df9a8912 616 Pfam PF01757 Acyltransferase family 5 318 5.1E-29 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 K04M3_42690 27f453d7f40a8289b1150939df9a8912 616 SUPERFAMILY SSF52266 402 602 8.93E-6 T 12-10-2018 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 PIRSF PIRSF000197 3 1042 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 2.2E-45 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 Gene3D G3DSA:3.40.605.10 550 1034 9.8E-147 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 SUPERFAMILY SSF51730 190 532 3.92E-116 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 Gene3D G3DSA:3.20.20.220 154 525 2.9E-131 T 12-10-2018 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 SUPERFAMILY SSF53720 559 1034 1.02E-125 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 Pfam PF01619 Proline dehydrogenase 197 490 1.2E-93 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 SUPERFAMILY SSF81935 17 188 1.96E-63 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1034 9.6E-243 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1034 1.0E-118 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_32680 6d98d1228c1d8726faba807626cef28e 1043 Gene3D G3DSA:3.40.309.10 813 1005 9.8E-147 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 SMART SM00482 405 648 3.2E-17 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 SUPERFAMILY SSF53098 27 226 6.91E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 Gene3D G3DSA:3.30.420.10 27 230 1.4E-67 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 SUPERFAMILY SSF56672 213 688 2.33E-101 T 12-10-2018 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 Pfam PF00476 DNA polymerase family A 546 685 7.8E-18 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 Pfam PF00476 DNA polymerase family A 290 511 3.5E-22 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 Gene3D G3DSA:1.20.1060.10 231 371 4.1E-41 T 12-10-2018 K04M3_39420 a261812bbb28f262a328d99e5d3f81f7 688 Pfam PF01612 3'-5' exonuclease 25 203 1.5E-5 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 Gene3D G3DSA:1.10.10.10 6 59 2.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 SUPERFAMILY SSF46785 7 68 2.22E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 SMART SM00344 8 115 3.0E-40 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 Gene3D G3DSA:3.30.70.920 60 142 2.3E-31 T 12-10-2018 K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_00610 5e6f77b59ce13ebe92f29f69d432d2f5 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_08520 f2fb0fff6bc77894d4993c007e3ee386 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 4.2E-13 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC K04M3_08520 f2fb0fff6bc77894d4993c007e3ee386 76 Gene3D G3DSA:1.10.10.10 1 72 9.4E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_08520 f2fb0fff6bc77894d4993c007e3ee386 76 SUPERFAMILY SSF46785 1 55 1.28E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_02980 573e0961cd99316dde1a879b6c444a96 302 SUPERFAMILY SSF52402 6 209 5.82E-74 T 12-10-2018 K04M3_02980 573e0961cd99316dde1a879b6c444a96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 K04M3_02980 573e0961cd99316dde1a879b6c444a96 302 PIRSF PIRSF002936 1 302 8.4E-156 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 K04M3_02980 573e0961cd99316dde1a879b6c444a96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.224 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 K04M3_02980 573e0961cd99316dde1a879b6c444a96 302 Gene3D G3DSA:3.40.50.620 7 212 1.4E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_02980 573e0961cd99316dde1a879b6c444a96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.3E-63 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 K04M3_01560 7141283cdaf4caf738e315e783c7d0bc 347 SUPERFAMILY SSF161098 139 325 3.14E-20 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_01560 7141283cdaf4caf738e315e783c7d0bc 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 1.5E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_01560 7141283cdaf4caf738e315e783c7d0bc 347 Gene3D G3DSA:1.10.3720.10 133 339 1.1E-18 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_09600 b6aedd9f17f8966273965954a41e68f6 130 Gene3D G3DSA:2.60.40.3230 18 129 2.1E-28 T 12-10-2018 IPR038483 YcfL-like superfamily K04M3_09600 b6aedd9f17f8966273965954a41e68f6 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 8.3E-30 T 12-10-2018 IPR010824 Protein of unknown function DUF1425 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 Gene3D G3DSA:3.60.21.10 1 367 2.7E-87 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 SUPERFAMILY SSF56300 9 325 5.31E-73 T 12-10-2018 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 SUPERFAMILY SSF55816 367 562 4.45E-39 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 Gene3D G3DSA:3.90.780.10 368 575 3.8E-35 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 Pfam PF00149 Calcineurin-like phosphoesterase 11 250 2.8E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 Pfam PF02872 5'-nucleotidase, C-terminal domain 372 538 4.4E-24 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 PRINTS PR01607 Apyrase family signature 273 293 4.7E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 PRINTS PR01607 Apyrase family signature 8 26 4.7E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 PRINTS PR01607 Apyrase family signature 233 256 4.7E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_41920 48fe08d40e99468b5dc02f5a30a13cdb 578 PRINTS PR01607 Apyrase family signature 214 231 4.7E-12 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_48240 bfd8fc91c0568cd88aa8eff4c48980bc 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 38 169 9.5E-46 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 K04M3_48240 bfd8fc91c0568cd88aa8eff4c48980bc 179 PIRSF PIRSF014995 8 179 4.1E-66 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 K04M3_48240 bfd8fc91c0568cd88aa8eff4c48980bc 179 Gene3D G3DSA:2.60.40.4070 95 149 2.8E-9 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 1.4E-150 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 SUPERFAMILY SSF55424 343 466 7.04E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 Gene3D G3DSA:3.50.50.60 9 332 3.9E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 SUPERFAMILY SSF51905 3 337 2.06E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 Gene3D G3DSA:3.30.390.30 346 467 4.5E-45 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.7E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 Gene3D G3DSA:3.50.50.60 150 271 3.9E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PIRSF PIRSF000350 1 468 1.3E-82 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 12-10-2018 K04M3_26210 f354f5cf67cb92e15a25e66089225326 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 12-10-2018 K04M3_22870 adee638c74562a69c197905530a8b62b 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 1.0E-97 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PIRSF PIRSF003161 18 351 2.6E-114 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain K04M3_22870 adee638c74562a69c197905530a8b62b 351 SUPERFAMILY SSF48029 133 344 1.83E-66 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 3.2E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 K04M3_22870 adee638c74562a69c197905530a8b62b 351 Gene3D G3DSA:1.10.220.30 214 351 6.5E-43 T 12-10-2018 K04M3_22870 adee638c74562a69c197905530a8b62b 351 Gene3D G3DSA:1.10.220.30 19 103 6.3E-18 T 12-10-2018 K04M3_22870 adee638c74562a69c197905530a8b62b 351 Pfam PF14842 FliG N-terminal domain 24 124 4.0E-28 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain K04M3_22870 adee638c74562a69c197905530a8b62b 351 Pfam PF01706 FliG C-terminal domain 236 343 2.8E-40 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal K04M3_22870 adee638c74562a69c197905530a8b62b 351 SUPERFAMILY SSF48029 25 135 3.92E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical K04M3_22870 adee638c74562a69c197905530a8b62b 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 12-10-2018 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 Gene3D G3DSA:3.30.9.50 80 275 5.6E-96 T 12-10-2018 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 1.2E-17 T 12-10-2018 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-17 T 12-10-2018 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 1.2E-17 T 12-10-2018 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-17 T 12-10-2018 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 Gene3D G3DSA:3.50.50.60 5 339 5.6E-96 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 1.8E-108 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 Pfam PF01494 FAD binding domain 4 341 3.7E-26 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 K04M3_07100 58ee737560f3df1dc42c729a63505a63 392 SUPERFAMILY SSF51905 3 384 4.24E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_45930 245c0ad2598031747a92001a5ba75a5e 457 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 4.2E-10 T 12-10-2018 IPR021570 LamB-type porin N-terminal domain K04M3_45930 245c0ad2598031747a92001a5ba75a5e 457 Gene3D G3DSA:2.40.170.10 54 457 4.8E-142 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 K04M3_45930 245c0ad2598031747a92001a5ba75a5e 457 Pfam PF02264 LamB porin 58 457 9.3E-97 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 K04M3_45930 245c0ad2598031747a92001a5ba75a5e 457 SUPERFAMILY SSF56935 56 457 1.19E-105 T 12-10-2018 K04M3_45930 245c0ad2598031747a92001a5ba75a5e 457 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 62 453 4.0E-111 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 K04M3_34290 9be924ae5c6aa776f6224531c19d96ff 142 Pfam PF10990 Protein of unknown function (DUF2809) 50 131 1.1E-21 T 12-10-2018 IPR021257 Protein of unknown function DUF2809 K04M3_38060 8f241adbd39453e6e0ec6bcd401e18b6 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 44 1.5E-6 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_38060 8f241adbd39453e6e0ec6bcd401e18b6 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 112 1.2E-5 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_38060 8f241adbd39453e6e0ec6bcd401e18b6 186 SUPERFAMILY SSF51161 7 138 2.88E-30 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_38060 8f241adbd39453e6e0ec6bcd401e18b6 186 Gene3D G3DSA:2.160.10.10 1 183 4.8E-46 T 12-10-2018 K04M3_02040 4feb1bf4d2e82b524ab005afac1e5151 329 SUPERFAMILY SSF56059 85 278 3.36E-21 T 12-10-2018 K04M3_02040 4feb1bf4d2e82b524ab005afac1e5151 329 Gene3D G3DSA:3.30.470.20 83 208 1.8E-8 T 12-10-2018 K04M3_25880 c7d6d4520ff10316c45d9ce92a284203 328 SUPERFAMILY SSF161098 93 307 8.28E-15 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25880 c7d6d4520ff10316c45d9ce92a284203 328 Gene3D G3DSA:1.10.3720.10 87 326 4.4E-18 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25880 c7d6d4520ff10316c45d9ce92a284203 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 3.9E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 Gene3D G3DSA:3.40.50.300 2 244 4.9E-78 T 12-10-2018 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 SMART SM00382 34 217 2.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 SUPERFAMILY SSF52540 9 246 3.55E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 SUPERFAMILY SSF50331 242 361 1.11E-17 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 359 1.7E-118 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 Pfam PF08402 TOBE domain 283 361 3.2E-16 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 Gene3D G3DSA:2.40.50.100 286 347 1.0E-6 T 12-10-2018 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 Pfam PF00005 ABC transporter 26 167 4.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_13310 9176a6e18d666e5dd675f92c74059b24 373 Gene3D G3DSA:2.40.50.140 245 285 1.0E-6 T 12-10-2018 K04M3_37650 f3f2e4a83166148bf619107b14109859 112 Gene3D G3DSA:3.30.1360.20 15 112 5.3E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 K04M3_37650 f3f2e4a83166148bf619107b14109859 112 SUPERFAMILY SSF55248 16 109 3.27E-34 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 K04M3_37650 f3f2e4a83166148bf619107b14109859 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.087 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 K04M3_37650 f3f2e4a83166148bf619107b14109859 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 5.4E-32 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 K04M3_44320 f71708d8303f7a7866e910d18c273e46 263 Gene3D G3DSA:1.25.40.590 44 200 2.2E-47 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily K04M3_44320 f71708d8303f7a7866e910d18c273e46 263 Pfam PF09850 Type VI secretion system protein DotU 47 246 1.1E-49 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU K04M3_44320 f71708d8303f7a7866e910d18c273e46 263 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 253 1.3E-60 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SUPERFAMILY SSF53706 714 1250 3.4E-203 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SUPERFAMILY SSF50692 1247 1394 2.94E-39 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.4E-14 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.4E-14 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.4E-14 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 1.1E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF12838 4Fe-4S dicluster domain 634 703 2.7E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SUPERFAMILY SSF51971 190 430 9.42E-61 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:3.40.50.740 781 1243 3.0E-178 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:3.50.50.60 318 523 3.3E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:3.50.50.60 190 312 1.4E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 4.8E-10 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 719 771 6.4E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:2.20.25.90 718 773 1.8E-18 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 723 741 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1148 1165 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:1.10.1060.10 58 189 2.5E-25 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SUPERFAMILY SSF46548 88 200 1.31E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF01568 Molydopterin dinucleotide binding domain 1285 1389 6.4E-29 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 2.3E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:3.30.70.20 614 707 4.5E-18 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:3.40.228.10 854 1055 3.0E-178 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SUPERFAMILY SSF54862 567 708 3.98E-20 T 12-10-2018 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SMART SM00926 718 773 3.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 723 1393 1.3E-246 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 SUPERFAMILY SSF54292 1 98 4.65E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Pfam PF00384 Molybdopterin oxidoreductase 776 1202 3.9E-88 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_36680 78195c845e1c9c17ad17752e18cef920 1412 Gene3D G3DSA:2.40.40.20 1275 1395 1.7E-39 T 12-10-2018 K04M3_05990 7074cf9abf1229f6b6d12536e93fc5cf 535 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 27 335 2.7E-70 T 12-10-2018 IPR014150 Conjugal transfer, TrbL K04M3_05990 7074cf9abf1229f6b6d12536e93fc5cf 535 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 63 276 3.3E-36 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 5.4E-34 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 SUPERFAMILY SSF55816 366 542 1.28E-52 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 Gene3D G3DSA:3.60.21.10 30 365 7.8E-125 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 Gene3D G3DSA:3.90.780.10 366 552 1.5E-58 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 SUPERFAMILY SSF56300 32 364 5.8E-95 T 12-10-2018 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 2.0E-22 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 PRINTS PR01607 Apyrase family signature 242 265 1.7E-50 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 PRINTS PR01607 Apyrase family signature 211 228 1.7E-50 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 PRINTS PR01607 Apyrase family signature 487 506 1.7E-50 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 PRINTS PR01607 Apyrase family signature 287 307 1.7E-50 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 PRINTS PR01607 Apyrase family signature 420 443 1.7E-50 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_07420 56de2ed90051037ae24f9394d8014eb6 560 PRINTS PR01607 Apyrase family signature 36 54 1.7E-50 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 Gene3D G3DSA:3.30.390.30 345 464 1.6E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 8.1E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 Gene3D G3DSA:3.50.50.60 7 333 1.8E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 9.5E-59 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.2E-52 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.2E-28 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-28 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-28 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 3.2E-28 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.2E-28 T 12-10-2018 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 PIRSF PIRSF000350 2 463 1.1E-69 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 SUPERFAMILY SSF51905 5 319 9.26E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.11 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 Gene3D G3DSA:3.50.50.60 158 276 1.8E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_30900 1ef3d35b790a7b4d8d10df1e39f7d778 466 SUPERFAMILY SSF55424 344 463 1.53E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 K04M3_42930 c3da32b89e7926000b1ac130c163df27 314 Gene3D G3DSA:3.40.50.300 6 174 4.5E-43 T 12-10-2018 K04M3_42930 c3da32b89e7926000b1ac130c163df27 314 SUPERFAMILY SSF52540 12 186 2.7E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_42930 c3da32b89e7926000b1ac130c163df27 314 Pfam PF01926 50S ribosome-binding GTPase 120 186 3.3E-14 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_42930 c3da32b89e7926000b1ac130c163df27 314 Gene3D G3DSA:1.10.1580.10 177 268 4.6E-28 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily K04M3_42930 c3da32b89e7926000b1ac130c163df27 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 9.0E-107 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis K04M3_42930 c3da32b89e7926000b1ac130c163df27 314 PIRSF PIRSF006230 2 280 8.6E-105 T 12-10-2018 IPR016478 GTPase, MTG1 K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 Pfam PF00005 ABC transporter 43 195 3.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 SMART SM00382 52 253 3.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 SUPERFAMILY SSF54631 329 386 2.75E-5 T 12-10-2018 K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 384 3.9E-180 T 12-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 SUPERFAMILY SSF52540 42 273 4.33E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43660 66095eb284b05f88d25e0f2146daf435 392 Gene3D G3DSA:3.40.50.300 30 291 4.3E-69 T 12-10-2018 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 290 4.5E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 Gene3D G3DSA:1.10.601.10 52 140 6.3E-38 T 12-10-2018 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 92 105 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 Pfam PF04545 Sigma-70, region 4 236 288 8.8E-9 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 PRINTS PR00046 Major sigma-70 factor signature 92 105 7.1E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 PRINTS PR00046 Major sigma-70 factor signature 275 286 7.1E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 PRINTS PR00046 Major sigma-70 factor signature 239 251 7.1E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 PRINTS PR00046 Major sigma-70 factor signature 116 124 7.1E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 PRINTS PR00046 Major sigma-70 factor signature 260 275 7.1E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 SUPERFAMILY SSF88946 24 138 5.97E-40 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 260 286 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 Pfam PF00140 Sigma-70 factor, region 1.2 27 60 1.8E-8 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 Pfam PF04542 Sigma-70 region 2 65 132 8.7E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 Gene3D G3DSA:1.10.10.10 217 292 4.7E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 SUPERFAMILY SSF88659 207 291 3.92E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_37410 1ce04473dd30d91fd633acc63fff401c 296 PIRSF PIRSF000770 1 293 8.4E-37 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 Gene3D G3DSA:3.40.190.10 92 285 1.6E-26 T 12-10-2018 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 Gene3D G3DSA:3.40.190.10 164 263 1.6E-26 T 12-10-2018 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 SUPERFAMILY SSF46785 1 86 2.33E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_16940 761174adc186c43420c14ed6787fa03a 299 Gene3D G3DSA:1.10.10.10 1 91 1.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16940 761174adc186c43420c14ed6787fa03a 299 Pfam PF03466 LysR substrate binding domain 87 290 1.4E-32 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_16940 761174adc186c43420c14ed6787fa03a 299 SUPERFAMILY SSF53850 87 294 7.6E-33 T 12-10-2018 K04M3_16940 761174adc186c43420c14ed6787fa03a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_26600 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 K04M3_26600 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 K04M3_26600 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 K04M3_26600 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 K04M3_26600 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 K04M3_26600 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 K04M3_32330 51badefb4dd0b8178691c63c926bc964 211 PIRSF PIRSF003078 2 211 4.1E-59 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 K04M3_32330 51badefb4dd0b8178691c63c926bc964 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 4.8E-57 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 K04M3_32330 51badefb4dd0b8178691c63c926bc964 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.696 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 K04M3_32330 51badefb4dd0b8178691c63c926bc964 211 Gene3D G3DSA:3.40.50.150 4 210 5.6E-69 T 12-10-2018 K04M3_32330 51badefb4dd0b8178691c63c926bc964 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 2.1E-62 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 K04M3_32330 51badefb4dd0b8178691c63c926bc964 211 SUPERFAMILY SSF53335 8 209 1.96E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_09430 1b71a388983433ec41c6ab799ed32f67 105 Gene3D G3DSA:1.10.3340.10 4 105 2.1E-45 T 12-10-2018 IPR036810 SMc04008-like superfamily K04M3_09430 1b71a388983433ec41c6ab799ed32f67 105 SUPERFAMILY SSF158757 8 85 3.66E-36 T 12-10-2018 IPR036810 SMc04008-like superfamily K04M3_09430 1b71a388983433ec41c6ab799ed32f67 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 4.1E-35 T 12-10-2018 IPR023163 SMc04008-like domain K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 6.1E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 SUPERFAMILY SSF55594 4 90 7.07E-25 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 Gene3D G3DSA:3.30.1340.10 1 85 6.2E-27 T 12-10-2018 IPR035895 HPr-like superfamily K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 9.0E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.1E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.1E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_28060 06c10b8cd0db37c59bc3caf73a8da4e0 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.1E-9 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like K04M3_51250 5df2b3a463d05cbcc61047cd8931f231 743 Pfam PF00437 Type II/IV secretion system protein 341 613 1.0E-39 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_51250 5df2b3a463d05cbcc61047cd8931f231 743 Gene3D G3DSA:3.40.50.300 452 731 8.1E-64 T 12-10-2018 K04M3_51250 5df2b3a463d05cbcc61047cd8931f231 743 SMART SM00382 476 597 1.0E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_51250 5df2b3a463d05cbcc61047cd8931f231 743 SUPERFAMILY SSF52540 315 728 5.58E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_13650 7810950d13ee3d6d824c112e23c70088 447 Gene3D G3DSA:3.30.590.10 117 446 3.8E-86 T 12-10-2018 K04M3_13650 7810950d13ee3d6d824c112e23c70088 447 SUPERFAMILY SSF54368 16 108 7.72E-7 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_13650 7810950d13ee3d6d824c112e23c70088 447 Pfam PF00120 Glutamine synthetase, catalytic domain 117 442 1.6E-86 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_13650 7810950d13ee3d6d824c112e23c70088 447 SMART SM01230 113 370 1.8E-85 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_13650 7810950d13ee3d6d824c112e23c70088 447 SUPERFAMILY SSF55931 116 444 4.25E-88 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 K04M3_13650 7810950d13ee3d6d824c112e23c70088 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 K04M3_14010 7810950d13ee3d6d824c112e23c70088 447 Gene3D G3DSA:3.30.590.10 117 446 3.8E-86 T 12-10-2018 K04M3_14010 7810950d13ee3d6d824c112e23c70088 447 SUPERFAMILY SSF54368 16 108 7.72E-7 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_14010 7810950d13ee3d6d824c112e23c70088 447 Pfam PF00120 Glutamine synthetase, catalytic domain 117 442 1.6E-86 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_14010 7810950d13ee3d6d824c112e23c70088 447 SMART SM01230 113 370 1.8E-85 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_14010 7810950d13ee3d6d824c112e23c70088 447 SUPERFAMILY SSF55931 116 444 4.25E-88 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 K04M3_14010 7810950d13ee3d6d824c112e23c70088 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 Pfam PF00149 Calcineurin-like phosphoesterase 39 259 1.2E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 Pfam PF02872 5'-nucleotidase, C-terminal domain 361 510 4.4E-29 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 SUPERFAMILY SSF55816 361 539 6.28E-40 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 PRINTS PR01607 Apyrase family signature 212 229 1.0E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 PRINTS PR01607 Apyrase family signature 416 439 1.0E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 PRINTS PR01607 Apyrase family signature 288 308 1.0E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 PRINTS PR01607 Apyrase family signature 37 55 1.0E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 PRINTS PR01607 Apyrase family signature 243 266 1.0E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 PRINTS PR01607 Apyrase family signature 485 504 1.0E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 Gene3D G3DSA:3.90.780.10 360 545 1.8E-43 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 SUPERFAMILY SSF56300 34 359 1.85E-91 T 12-10-2018 K04M3_11700 c0464e603099778cf2c1748da7820c13 562 Gene3D G3DSA:3.60.21.10 33 359 1.2E-111 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_38390 df7da8584ceac27d3cb98a8a39ea5cb2 329 Gene3D G3DSA:3.20.20.140 1 326 3.2E-92 T 12-10-2018 K04M3_38390 df7da8584ceac27d3cb98a8a39ea5cb2 329 SUPERFAMILY SSF51556 4 325 3.86E-84 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_38390 df7da8584ceac27d3cb98a8a39ea5cb2 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 5.8E-73 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 2.7E-124 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.2E-17 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 SUPERFAMILY SSF103039 4 230 5.75E-21 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 SUPERFAMILY SSF101801 247 322 3.79E-14 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 PIRSF PIRSF002888 1 328 2.4E-92 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_22800 c581d10f34a85e431a071d34aee926c8 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 K04M3_20330 96d1983b4c32a8d428f58a92a65d567d 130 PIRSF PIRSF007010 1 130 2.8E-56 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein K04M3_20330 96d1983b4c32a8d428f58a92a65d567d 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 1.4E-49 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein K04M3_20330 96d1983b4c32a8d428f58a92a65d567d 130 Gene3D G3DSA:3.30.300.250 18 129 1.3E-42 T 12-10-2018 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 21 49 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 212 238 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 63 86 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 89 109 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 125 151 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 183 205 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 PRINTS PR00169 Potassium channel signature 154 177 7.7E-36 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 Gene3D G3DSA:1.10.287.70 139 247 2.3E-27 T 12-10-2018 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 SUPERFAMILY SSF81324 28 239 1.41E-50 T 12-10-2018 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 Pfam PF00520 Ion transport protein 28 239 1.8E-30 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 K04M3_21800 3eefd94b9629e78f61b1e30564ced268 287 Gene3D G3DSA:1.20.120.350 9 137 1.1E-27 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily K04M3_17000 d0770ddc28faf43343fa91a234be11d6 481 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_17000 d0770ddc28faf43343fa91a234be11d6 481 SUPERFAMILY SSF55811 32 163 4.6E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_17000 d0770ddc28faf43343fa91a234be11d6 481 Gene3D G3DSA:3.90.79.10 32 184 2.8E-15 T 12-10-2018 K04M3_17000 d0770ddc28faf43343fa91a234be11d6 481 Pfam PF00293 NUDIX domain 32 125 4.9E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_17000 d0770ddc28faf43343fa91a234be11d6 481 SUPERFAMILY SSF48317 145 354 9.29E-10 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily K04M3_43070 fd8d41a38a1216ede059533b181c78fc 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 K04M3_43070 fd8d41a38a1216ede059533b181c78fc 141 SUPERFAMILY SSF53927 2 137 4.43E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_43070 fd8d41a38a1216ede059533b181c78fc 141 Gene3D G3DSA:3.40.140.10 1 133 7.8E-42 T 12-10-2018 K04M3_43070 fd8d41a38a1216ede059533b181c78fc 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 5.0E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Pfam PF02954 Bacterial regulatory protein, Fis family 591 632 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Gene3D G3DSA:3.30.450.20 226 328 2.0E-19 T 12-10-2018 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 SUPERFAMILY SSF46689 581 634 9.86E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Pfam PF00989 PAS fold 221 308 2.1E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 418 433 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Gene3D G3DSA:1.10.8.60 504 579 3.4E-15 T 12-10-2018 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 SUPERFAMILY SSF52540 342 574 5.05E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Gene3D G3DSA:3.40.50.300 329 503 5.3E-41 T 12-10-2018 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Pfam PF00158 Sigma-54 interaction domain 342 497 9.6E-33 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Gene3D G3DSA:3.30.450.40 18 202 1.5E-45 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 SUPERFAMILY SSF55785 220 307 2.97E-7 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_03660 022844c9f0c4895a69076a3dcece9732 641 Gene3D G3DSA:1.10.10.60 591 634 1.8E-12 T 12-10-2018 K04M3_04730 2b2aae0a0f61d49b737ca532d5227520 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.5E-95 T 12-10-2018 IPR005583 Peroxide stress protein YaaA K04M3_04730 2b2aae0a0f61d49b737ca532d5227520 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 39.097 T 12-10-2018 IPR005583 Peroxide stress protein YaaA K04M3_03190 f282e378f0a708141cfd0aeed64c09ac 212 SUPERFAMILY SSF52507 11 207 5.63E-57 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 K04M3_03190 f282e378f0a708141cfd0aeed64c09ac 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 13 206 3.2E-57 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like K04M3_03190 f282e378f0a708141cfd0aeed64c09ac 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 11 208 34.826 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like K04M3_03190 f282e378f0a708141cfd0aeed64c09ac 212 Gene3D G3DSA:3.40.50.1950 3 209 1.1E-77 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 K04M3_03190 f282e378f0a708141cfd0aeed64c09ac 212 Pfam PF02441 Flavoprotein 12 187 1.9E-25 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 K04M3_32270 e56fc2c35215b72899fbc442e3bac35f 156 Gene3D G3DSA:1.20.5.620 62 122 1.0E-23 T 12-10-2018 K04M3_32270 e56fc2c35215b72899fbc442e3bac35f 156 SUPERFAMILY SSF81573 63 121 6.93E-15 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily K04M3_32270 e56fc2c35215b72899fbc442e3bac35f 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.6E-61 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 K04M3_32270 e56fc2c35215b72899fbc442e3bac35f 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.629 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 K04M3_32270 e56fc2c35215b72899fbc442e3bac35f 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 9.7E-37 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 K04M3_37220 01f8e0d13520f68da72949ebbc220156 140 SUPERFAMILY SSF55729 11 137 3.99E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_37220 01f8e0d13520f68da72949ebbc220156 140 Gene3D G3DSA:3.40.630.30 35 138 5.3E-25 T 12-10-2018 K04M3_37220 01f8e0d13520f68da72949ebbc220156 140 Pfam PF00583 Acetyltransferase (GNAT) family 31 115 5.0E-12 T 12-10-2018 IPR000182 GNAT domain K04M3_42620 0370913d270ebcf007e8b46be79f49f9 447 SUPERFAMILY SSF158791 18 136 1.23E-10 T 12-10-2018 K04M3_42620 0370913d270ebcf007e8b46be79f49f9 447 Gene3D G3DSA:1.10.357.20 273 446 9.0E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain K04M3_42620 0370913d270ebcf007e8b46be79f49f9 447 SUPERFAMILY SSF161093 279 446 1.01E-43 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 K04M3_42620 0370913d270ebcf007e8b46be79f49f9 447 Pfam PF03448 MgtE intracellular N domain 37 137 1.1E-12 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain K04M3_42620 0370913d270ebcf007e8b46be79f49f9 447 SMART SM00924 36 139 4.2E-4 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain K04M3_42620 0370913d270ebcf007e8b46be79f49f9 447 Pfam PF01769 Divalent cation transporter 318 439 1.4E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 K04M3_19800 bb5be4bc20210160552b57814c4ae1cd 218 SUPERFAMILY SSF142695 39 192 6.67E-54 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_19800 bb5be4bc20210160552b57814c4ae1cd 218 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 23 218 37.878 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_19800 bb5be4bc20210160552b57814c4ae1cd 218 Pfam PF00925 GTP cyclohydrolase II 39 191 8.7E-59 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_19800 bb5be4bc20210160552b57814c4ae1cd 218 Gene3D G3DSA:3.40.50.10990 24 194 2.4E-63 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_38190 da8eeb358fb8d7d9872aac1813b367b3 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 273 1.4E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_38190 da8eeb358fb8d7d9872aac1813b367b3 279 Gene3D G3DSA:1.10.12.10 217 279 1.2E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal K04M3_38190 da8eeb358fb8d7d9872aac1813b367b3 279 SUPERFAMILY SSF52096 15 272 2.7E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_38190 da8eeb358fb8d7d9872aac1813b367b3 279 Gene3D G3DSA:3.90.226.10 14 214 1.9E-60 T 12-10-2018 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Gene3D G3DSA:1.25.40.10 59 206 1.4E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Gene3D G3DSA:1.25.40.10 387 694 1.8E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 SMART SM00028 95 128 2.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 SMART SM00028 388 421 0.0033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 SMART SM00028 340 373 0.031 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 SMART SM00028 422 455 3.6E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 SMART SM00028 306 339 220.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 PRINTS PR01441 Cellulose synthase subunit C signature 244 266 2.7E-10 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 PRINTS PR01441 Cellulose synthase subunit C signature 532 552 2.7E-10 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 PRINTS PR01441 Cellulose synthase subunit C signature 1119 1143 2.7E-10 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Pfam PF13432 Tetratricopeptide repeat 101 172 3.1E-4 T 12-10-2018 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Pfam PF13432 Tetratricopeptide repeat 312 375 0.0013 T 12-10-2018 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 921 1235 4.8E-94 T 12-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 SUPERFAMILY SSF48452 84 548 2.91E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Pfam PF13414 TPR repeat 395 433 1.9E-8 T 12-10-2018 K04M3_08030 141798ced0dad6794d069d7959897ba0 1254 Gene3D G3DSA:1.25.40.10 291 386 2.6E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 Gene3D G3DSA:2.40.420.20 288 355 1.3E-52 T 12-10-2018 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 Gene3D G3DSA:2.40.50.100 79 207 1.3E-52 T 12-10-2018 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 356 3.4E-50 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 SUPERFAMILY SSF111369 68 283 1.19E-32 T 12-10-2018 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 Gene3D G3DSA:1.10.287.470 114 173 1.3E-52 T 12-10-2018 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 Gene3D G3DSA:2.40.30.170 67 287 1.3E-52 T 12-10-2018 K04M3_25810 10f9321659fc3d086af99f15359a85fd 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 278 8.2E-25 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_46940 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site K04M3_46940 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_46940 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_46940 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 Gene3D G3DSA:1.10.357.10 1 174 2.7E-24 T 12-10-2018 K04M3_46940 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 SUPERFAMILY SSF46689 3 71 1.3E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_46940 2a0ac67df7f0fdcfcb7d4e6f7f73a3fb 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.5E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 12-10-2018 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 Gene3D G3DSA:3.40.190.10 103 288 4.0E-58 T 12-10-2018 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06700 d6a068e67ddaa18857e19cd74f032c7a 306 Gene3D G3DSA:3.40.190.10 163 261 4.0E-58 T 12-10-2018 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.9E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 SUPERFAMILY SSF48179 177 472 7.48E-126 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 1.4E-51 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 SMART SM01350 179 469 1.8E-213 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 Gene3D G3DSA:3.40.50.720 1 180 1.3E-56 T 12-10-2018 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 Gene3D G3DSA:1.20.5.320 435 482 6.6E-25 T 12-10-2018 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 SUPERFAMILY SSF51735 4 174 6.79E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 8.7E-234 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 8.7E-126 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 Gene3D G3DSA:1.10.1040.10 181 434 4.5E-102 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_17640 307876df6b48fde8d13f37569ac5bf20 482 PIRSF PIRSF000109 1 477 1.6E-240 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 SMART SM00079 26 251 0.0031 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 Gene3D G3DSA:3.40.190.10 30 249 5.1E-72 T 12-10-2018 K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 SMART SM00062 26 252 1.6E-66 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 SUPERFAMILY SSF53850 1 253 5.43E-70 T 12-10-2018 K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 2.0E-61 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 6.7E-79 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 K04M3_09890 07c7e18d74db060e1c9785f7601aefbf 256 Gene3D G3DSA:3.40.190.10 112 208 5.1E-72 T 12-10-2018 K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 Gene3D G3DSA:3.40.50.300 11 274 2.4E-97 T 12-10-2018 K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 Gene3D G3DSA:3.40.50.300 282 637 1.3E-131 T 12-10-2018 K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 SUPERFAMILY SSF52540 8 643 1.13E-179 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.6E-78 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 8.2E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 Gene3D G3DSA:1.10.10.160 115 188 2.4E-97 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 Gene3D G3DSA:1.10.486.10 383 539 1.3E-131 T 12-10-2018 K04M3_31580 2c494a24e5b1c92b4de6f05c8ded5e0d 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 K04M3_17980 67d3586ece56c0d1813d0ccb5f5e92d9 95 Gene3D G3DSA:3.30.70.100 8 94 6.3E-12 T 12-10-2018 K04M3_17980 67d3586ece56c0d1813d0ccb5f5e92d9 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 27 71 1.2E-7 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain K04M3_17980 67d3586ece56c0d1813d0ccb5f5e92d9 95 SUPERFAMILY SSF54909 4 84 6.6E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 Gene3D G3DSA:3.90.1150.10 7 419 2.1E-179 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 Gene3D G3DSA:3.40.640.10 69 317 2.1E-179 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.6E-194 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 Pfam PF00202 Aminotransferase class-III 33 396 4.1E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 SUPERFAMILY SSF53383 2 423 1.37E-135 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.76 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 K04M3_25830 a628e0867e480c8c519bdd531b65ab18 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_12280 441fc3c8a224ea657c1de1631773f7aa 268 Pfam PF12119 Protein of unknown function (DUF3581) 28 244 1.3E-99 T 12-10-2018 IPR021974 Protein of unknown function DUF3581 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 3.5E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Gene3D G3DSA:3.90.1440.10 229 369 1.6E-176 T 12-10-2018 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Gene3D G3DSA:3.40.50.300 418 620 6.5E-87 T 12-10-2018 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.058 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 SUPERFAMILY SSF52540 5 416 6.56E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Gene3D G3DSA:1.10.3060.10 621 833 6.4E-76 T 12-10-2018 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 SUPERFAMILY SSF81886 620 897 2.35E-83 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Pfam PF07517 SecA DEAD-like domain 7 403 3.1E-134 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 SUPERFAMILY SSF52540 418 610 1.12E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 5.2E-38 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Pfam PF02810 SEC-C motif 889 907 3.3E-10 T 12-10-2018 IPR004027 SEC-C motif K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 Gene3D G3DSA:3.40.50.300 22 416 1.6E-176 T 12-10-2018 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 SMART SM00958 228 359 4.2E-80 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 SMART SM00957 6 403 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 K04M3_04370 3b3d19ce2eab7cb52c315d258c4a9aa0 909 SUPERFAMILY SSF81767 227 369 2.22E-42 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 K04M3_38260 d8ba918181062a6f079ba580c176dd8d 261 Gene3D G3DSA:3.90.226.10 5 201 8.0E-60 T 12-10-2018 K04M3_38260 d8ba918181062a6f079ba580c176dd8d 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 K04M3_38260 d8ba918181062a6f079ba580c176dd8d 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 7.9E-59 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_38260 d8ba918181062a6f079ba580c176dd8d 261 Gene3D G3DSA:1.10.12.10 204 261 1.7E-18 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal K04M3_38260 d8ba918181062a6f079ba580c176dd8d 261 SUPERFAMILY SSF52096 4 261 3.02E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_45880 75c0295751342f363e21388911561b2a 285 Gene3D G3DSA:1.20.1050.10 132 248 3.7E-110 T 12-10-2018 K04M3_45880 75c0295751342f363e21388911561b2a 285 Gene3D G3DSA:3.40.30.10 17 254 3.7E-110 T 12-10-2018 K04M3_45880 75c0295751342f363e21388911561b2a 285 SUPERFAMILY SSF47616 116 258 1.64E-31 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_45880 75c0295751342f363e21388911561b2a 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 126 1.0E-5 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_45880 75c0295751342f363e21388911561b2a 285 SUPERFAMILY SSF52833 38 130 1.66E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_45880 75c0295751342f363e21388911561b2a 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 2.5E-9 T 12-10-2018 K04M3_13010 c401fc7c7650e71113340322408db882 141 Gene3D G3DSA:3.90.1720.10 1 129 3.7E-5 T 12-10-2018 K04M3_35870 0b7a5260506a14c6895095b58a0aa057 177 Pfam PF10531 SLBB domain 105 158 1.0E-16 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_35870 0b7a5260506a14c6895095b58a0aa057 177 SUPERFAMILY SSF142984 103 139 6.02E-5 T 12-10-2018 K04M3_35870 0b7a5260506a14c6895095b58a0aa057 177 Gene3D G3DSA:3.30.1950.10 31 103 2.0E-22 T 12-10-2018 K04M3_35870 0b7a5260506a14c6895095b58a0aa057 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 4.1E-17 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 K04M3_35870 0b7a5260506a14c6895095b58a0aa057 177 Gene3D G3DSA:3.10.560.10 20 163 2.0E-22 T 12-10-2018 K04M3_45350 8dc080f465211423b09c820a32851ba0 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 7.0E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 K04M3_45350 8dc080f465211423b09c820a32851ba0 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.937 T 12-10-2018 IPR007458 Protein of unknown function DUF496 K04M3_45350 8dc080f465211423b09c820a32851ba0 104 PIRSF PIRSF028773 1 104 1.4E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 K04M3_45350 8dc080f465211423b09c820a32851ba0 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 7.1E-42 T 12-10-2018 IPR007458 Protein of unknown function DUF496 K04M3_10150 c2f1ba35b1c27762ecd28537a9e8d197 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.6E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_10150 c2f1ba35b1c27762ecd28537a9e8d197 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.6E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_10150 c2f1ba35b1c27762ecd28537a9e8d197 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.6E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_10150 c2f1ba35b1c27762ecd28537a9e8d197 267 SUPERFAMILY SSF53474 15 260 2.03E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_10150 c2f1ba35b1c27762ecd28537a9e8d197 267 Gene3D G3DSA:3.40.50.1820 7 264 2.7E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_10150 c2f1ba35b1c27762ecd28537a9e8d197 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 7.7E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_07430 fcee619cc49cd890187e7d77699c58a4 157 SUPERFAMILY SSF55826 2 156 8.89E-44 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_07430 fcee619cc49cd890187e7d77699c58a4 157 Gene3D G3DSA:3.90.960.10 1 157 3.7E-58 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_07430 fcee619cc49cd890187e7d77699c58a4 157 PIRSF PIRSF006181 1 157 1.2E-53 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC K04M3_07430 fcee619cc49cd890187e7d77699c58a4 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.1E-59 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC K04M3_07430 fcee619cc49cd890187e7d77699c58a4 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 2.7E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 K04M3_23120 af3b3cd34a727f86a8956b10960eae93 117 Pfam PF00578 AhpC/TSA family 7 109 2.5E-32 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_23120 af3b3cd34a727f86a8956b10960eae93 117 Gene3D G3DSA:3.40.30.10 1 115 4.8E-37 T 12-10-2018 K04M3_23120 af3b3cd34a727f86a8956b10960eae93 117 SUPERFAMILY SSF52833 1 111 3.16E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_04170 a3d9d0204eaf25932f6380f428ed5479 222 Pfam PF04972 BON domain 120 185 1.7E-17 T 12-10-2018 IPR007055 BON domain K04M3_04170 a3d9d0204eaf25932f6380f428ed5479 222 Pfam PF04972 BON domain 44 110 2.8E-11 T 12-10-2018 IPR007055 BON domain K04M3_04170 a3d9d0204eaf25932f6380f428ed5479 222 SMART SM00749 125 188 8.9E-4 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria K04M3_04170 a3d9d0204eaf25932f6380f428ed5479 222 SMART SM00749 48 111 26.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria K04M3_07490 8ea1c05cae82f8524834be0c694b3ded 290 Pfam PF01963 TraB family 26 279 4.8E-50 T 12-10-2018 IPR002816 Pheromone shutdown, TraB K04M3_08730 21e045a79b8f8b0be69b799313b87a0c 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 3.7E-71 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 K04M3_08730 21e045a79b8f8b0be69b799313b87a0c 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 3.4E-26 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 K04M3_08730 21e045a79b8f8b0be69b799313b87a0c 399 Pfam PF07670 Nucleoside recognition 87 182 1.6E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_08730 21e045a79b8f8b0be69b799313b87a0c 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 2.0E-133 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SUPERFAMILY SSF54768 108 222 4.71E-29 T 12-10-2018 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Gene3D G3DSA:1.10.1520.10 4 146 5.0E-44 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Gene3D G3DSA:3.30.160.20 153 224 3.7E-20 T 12-10-2018 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SUPERFAMILY SSF69065 5 158 3.84E-50 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Pfam PF14622 Ribonuclease-III-like 20 140 7.0E-33 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.073 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SMART SM00358 155 223 1.4E-22 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.8E-16 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 SMART SM00535 20 148 4.7E-55 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 K04M3_26860 84ea28bbca7e2c9b47f9f1b5518fd3f3 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 1.5E-74 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 K04M3_13520 c46d4c61c2f226386f40b6e9fd04be39 212 Pfam PF01965 DJ-1/PfpI family 3 156 6.1E-18 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 K04M3_13520 c46d4c61c2f226386f40b6e9fd04be39 212 SUPERFAMILY SSF52317 1 178 4.58E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_13520 c46d4c61c2f226386f40b6e9fd04be39 212 Gene3D G3DSA:3.40.50.880 2 212 2.7E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 Gene3D G3DSA:3.40.50.10380 6 170 1.2E-66 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 SMART SM01274 28 161 8.6E-75 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 PIRSF PIRSF000106 119 425 1.4E-63 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 PIRSF PIRSF000106 52 127 3.9E-10 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 SMART SM00919 173 409 1.4E-142 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 3.4E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 Gene3D G3DSA:3.40.50.720 171 425 1.0E-83 T 12-10-2018 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 SUPERFAMILY SSF51735 173 420 2.91E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 6.5E-27 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 K04M3_29070 7e1dd2cd543a64c6f609c216f3e27684 425 SUPERFAMILY SSF53223 20 171 3.31E-52 T 12-10-2018 K04M3_04980 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 3.9E-30 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_04980 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 5.4E-28 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_04980 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_04980 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_04980 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_04980 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_14350 d83873dbe13fd9928cf8080e31cf9a73 227 Pfam PF09116 gp45 sliding clamp, C terminal 123 226 2.5E-10 T 12-10-2018 IPR015200 Gp45 sliding clamp, C-terminal GO:0039693 K04M3_14350 d83873dbe13fd9928cf8080e31cf9a73 227 Gene3D G3DSA:3.70.10.10 1 227 4.6E-66 T 12-10-2018 K04M3_14350 d83873dbe13fd9928cf8080e31cf9a73 227 SUPERFAMILY SSF55979 121 226 1.0E-12 T 12-10-2018 K04M3_14350 d83873dbe13fd9928cf8080e31cf9a73 227 SUPERFAMILY SSF55979 1 109 4.08E-22 T 12-10-2018 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 Gene3D G3DSA:1.10.3730.10 165 272 2.9E-34 T 12-10-2018 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 PIRSF PIRSF000193 3 270 3.0E-75 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 5.2E-72 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 3.1E-25 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 Gene3D G3DSA:3.40.50.720 2 164 2.4E-50 T 12-10-2018 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 SUPERFAMILY SSF51735 4 160 3.07E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 SUPERFAMILY SSF48179 163 270 1.14E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 9.1E-30 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 K04M3_27280 a48e27eb05a66c6f6850936a8fb99193 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.06 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 K04M3_34790 566c113fd0067c9a3b4f7e4bdbcea91b 171 SUPERFAMILY SSF49329 25 171 6.68E-50 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 K04M3_34790 566c113fd0067c9a3b4f7e4bdbcea91b 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 159 170 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 K04M3_34790 566c113fd0067c9a3b4f7e4bdbcea91b 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 170 1.4E-31 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 K04M3_34790 566c113fd0067c9a3b4f7e4bdbcea91b 171 Gene3D G3DSA:2.60.40.200 21 171 3.1E-47 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 K04M3_34790 566c113fd0067c9a3b4f7e4bdbcea91b 171 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 63 73 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 K04M3_46230 344b8224eafc27fcd23da10c45ee2146 467 Pfam PF00202 Aminotransferase class-III 34 452 3.1E-80 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_46230 344b8224eafc27fcd23da10c45ee2146 467 PIRSF PIRSF000521 36 455 1.2E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_46230 344b8224eafc27fcd23da10c45ee2146 467 Gene3D G3DSA:3.40.640.10 68 347 6.3E-156 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_46230 344b8224eafc27fcd23da10c45ee2146 467 Gene3D G3DSA:3.90.1150.10 12 452 6.3E-156 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_46230 344b8224eafc27fcd23da10c45ee2146 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_46230 344b8224eafc27fcd23da10c45ee2146 467 SUPERFAMILY SSF53383 32 454 6.44E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 Pfam PF00266 Aminotransferase class-V 36 313 7.5E-31 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 6.5E-171 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 Gene3D G3DSA:3.40.640.10 16 262 8.7E-123 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 SUPERFAMILY SSF53383 3 362 5.39E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 214.72 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 Gene3D G3DSA:3.90.1150.10 8 353 8.7E-123 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 3.0E-202 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 K04M3_47440 188f867f077f642e3ac7ba4e7298cd4a 367 PIRSF PIRSF000524 1 365 1.4E-57 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Gene3D G3DSA:3.30.450.20 132 270 2.3E-20 T 12-10-2018 K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 268 1.2E-6 T 12-10-2018 IPR000014 PAS domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 3.0E-24 T 12-10-2018 IPR000014 PAS domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SMART SM00091 269 335 1.7E-8 T 12-10-2018 IPR000014 PAS domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SMART SM00091 146 212 17.0 T 12-10-2018 IPR000014 PAS domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Pfam PF00563 EAL domain 572 807 2.0E-75 T 12-10-2018 IPR001633 EAL domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SMART SM00267 383 556 4.8E-63 T 12-10-2018 IPR000160 GGDEF domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SUPERFAMILY SSF141868 572 813 2.88E-89 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SUPERFAMILY SSF55785 152 262 1.03E-15 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SUPERFAMILY SSF55785 277 380 3.49E-29 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 554 6.4E-43 T 12-10-2018 IPR000160 GGDEF domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Pfam PF08448 PAS fold 158 262 9.1E-10 T 12-10-2018 IPR013656 PAS fold-4 K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Gene3D G3DSA:3.30.70.270 393 569 7.0E-59 T 12-10-2018 K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 2.8E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SMART SM00086 341 383 7.5E-8 T 12-10-2018 IPR001610 PAC motif K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SMART SM00086 219 261 9.8 T 12-10-2018 IPR001610 PAC motif K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SMART SM00052 566 812 7.2E-118 T 12-10-2018 IPR001633 EAL domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 SUPERFAMILY SSF55073 399 558 1.8E-46 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Pfam PF13426 PAS domain 280 381 9.3E-19 T 12-10-2018 IPR000014 PAS domain K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Gene3D G3DSA:3.20.20.450 570 815 1.5E-101 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_00820 f90b354f751bef466d67cb1bc1d6ab9f 815 Gene3D G3DSA:3.30.450.20 271 392 4.0E-37 T 12-10-2018 K04M3_49350 9bafb07a3ae7219a85767bfdc0c24112 285 Pfam PF00005 ABC transporter 21 158 7.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_49350 9bafb07a3ae7219a85767bfdc0c24112 285 SUPERFAMILY SSF52540 4 222 9.82E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_49350 9bafb07a3ae7219a85767bfdc0c24112 285 SMART SM00382 30 208 2.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_49350 9bafb07a3ae7219a85767bfdc0c24112 285 Gene3D G3DSA:3.40.50.300 2 264 9.4E-46 T 12-10-2018 K04M3_43290 a472549b8450fecd4fe1db0310c522ba 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 7.0E-33 T 12-10-2018 IPR020137 Uncharacterised protein family HI1736 K04M3_43290 a472549b8450fecd4fe1db0310c522ba 83 Pfam PF10688 Bacterial inner membrane protein 4 73 1.9E-9 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV K04M3_43290 a472549b8450fecd4fe1db0310c522ba 83 Gene3D G3DSA:1.20.1280.290 26 76 1.5E-6 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 SUPERFAMILY SSF54211 257 456 4.55E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 8.4E-226 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.4E-9 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 Gene3D G3DSA:3.30.230.10 328 459 8.6E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 Gene3D G3DSA:3.40.50.300 68 281 1.5E-38 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 Pfam PF13481 AAA domain 85 224 1.4E-13 T 12-10-2018 K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 SUPERFAMILY SSF52540 70 294 5.74E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 SMART SM00382 93 246 7.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_25360 069f691cb6ef24cb948e602125d8e9ea 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.11 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 K04M3_24740 a9b586f466a5c431f70a449c81eca271 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.3E-52 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG K04M3_46900 e761322977df316f6af366839a43d302 467 TIGRFAM TIGR00908 2A0305: ethanolamine permease 10 450 1.5E-147 T 12-10-2018 IPR004757 Ethanolamine permease K04M3_46900 e761322977df316f6af366839a43d302 467 Pfam PF13520 Amino acid permease 24 409 1.9E-39 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_46900 e761322977df316f6af366839a43d302 467 PIRSF PIRSF006060 1 464 1.1E-66 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_46900 e761322977df316f6af366839a43d302 467 Gene3D G3DSA:1.20.1740.10 14 459 7.6E-51 T 12-10-2018 K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 9.9E-24 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.1E-40 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 12-10-2018 IPR005824 KOW K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.099 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 Gene3D G3DSA:2.30.30.30 2 104 5.8E-40 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 SUPERFAMILY SSF50104 4 101 3.74E-34 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_02740 26bcca270fcfc63981ecf56ff9520e41 105 SMART SM00739 4 31 3.4E-4 T 12-10-2018 IPR005824 KOW K04M3_20770 26768ed0252088ba10852ee8287637c6 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 1.7E-36 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component K04M3_20770 26768ed0252088ba10852ee8287637c6 192 Gene3D G3DSA:3.40.50.10610 20 191 3.3E-11 T 12-10-2018 K04M3_20770 26768ed0252088ba10852ee8287637c6 192 SUPERFAMILY SSF159594 28 191 6.8E-29 T 12-10-2018 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.957 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 PIRSF PIRSF000382 2 760 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 1.7E-121 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 SUPERFAMILY SSF51726 396 757 8.89E-114 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 SUPERFAMILY SSF51726 5 393 1.03E-109 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 1.3E-149 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 K04M3_20340 2a35a23dcc8e49ae34789b35cb87df6f 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 K04M3_33690 79d858216c13e21fd5acf38c92d7d1fe 102 Gene3D G3DSA:3.30.1360.60 20 101 1.1E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_33690 79d858216c13e21fd5acf38c92d7d1fe 102 SUPERFAMILY SSF55604 25 97 1.26E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_33690 79d858216c13e21fd5acf38c92d7d1fe 102 Pfam PF00367 phosphotransferase system, EIIB 28 59 1.5E-9 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_41150 1e8e8d3a635a6b82d7fbc3c2bd8076f1 382 Pfam PF02486 Replication initiation factor 183 360 1.8E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 K04M3_41020 1e8e8d3a635a6b82d7fbc3c2bd8076f1 382 Pfam PF02486 Replication initiation factor 183 360 1.8E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 K04M3_41530 1e8e8d3a635a6b82d7fbc3c2bd8076f1 382 Pfam PF02486 Replication initiation factor 183 360 1.8E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 K04M3_28460 b028e62408b8fab4340d871a41675b69 130 SUPERFAMILY SSF48295 4 53 1.52E-10 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 K04M3_04960 730fa7c8affae0e06523a623a7753368 296 Pfam PF03466 LysR substrate binding domain 96 288 4.3E-13 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_04960 730fa7c8affae0e06523a623a7753368 296 Gene3D G3DSA:1.10.10.10 4 92 5.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_04960 730fa7c8affae0e06523a623a7753368 296 SUPERFAMILY SSF53850 90 288 1.12E-24 T 12-10-2018 K04M3_04960 730fa7c8affae0e06523a623a7753368 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_04960 730fa7c8affae0e06523a623a7753368 296 SUPERFAMILY SSF46785 2 85 1.03E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_04960 730fa7c8affae0e06523a623a7753368 296 Gene3D G3DSA:3.40.190.290 95 293 6.5E-9 T 12-10-2018 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 PIRSF PIRSF000102 1 308 3.1E-63 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 SUPERFAMILY SSF51735 1 145 5.4E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 Gene3D G3DSA:3.90.110.10 147 311 3.4E-55 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.7E-47 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 7.8E-131 T 12-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.671 T 12-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.5E-50 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 SUPERFAMILY SSF56327 146 309 2.47E-43 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 K04M3_03290 b51e4103613fc34cff0926ca5de156c7 311 Gene3D G3DSA:3.40.50.720 1 146 4.5E-66 T 12-10-2018 K04M3_06750 c21a414d68813188524efc7fa16bf240 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 2.1E-56 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 K04M3_06750 c21a414d68813188524efc7fa16bf240 458 Gene3D G3DSA:3.30.1850.10 1 120 1.9E-57 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 K04M3_06750 c21a414d68813188524efc7fa16bf240 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 7.3E-51 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 K04M3_06750 c21a414d68813188524efc7fa16bf240 458 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 12-10-2018 IPR031100 LOG family K04M3_06750 c21a414d68813188524efc7fa16bf240 458 Gene3D G3DSA:3.40.50.450 121 450 1.8E-124 T 12-10-2018 K04M3_06750 c21a414d68813188524efc7fa16bf240 458 SUPERFAMILY SSF102405 119 327 1.02E-41 T 12-10-2018 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Gene3D G3DSA:3.30.420.40 194 361 7.3E-111 T 12-10-2018 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Gene3D G3DSA:1.20.1270.10 521 616 9.1E-27 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Gene3D G3DSA:3.30.420.40 23 374 7.3E-111 T 12-10-2018 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 SUPERFAMILY SSF100934 504 616 1.24E-34 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.457 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 SUPERFAMILY SSF53067 19 196 1.1E-50 T 12-10-2018 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 7.2E-269 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Gene3D G3DSA:3.90.640.10 238 311 7.3E-111 T 12-10-2018 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.7E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Pfam PF00012 Hsp70 protein 22 601 1.2E-189 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 SUPERFAMILY SSF100920 384 537 1.19E-51 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 SUPERFAMILY SSF53067 200 377 5.69E-50 T 12-10-2018 K04M3_05750 7ecfbdd6e3736fda0a78e3ecea4c037b 617 Gene3D G3DSA:2.60.34.10 379 520 9.3E-50 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 5.6E-301 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Gene3D G3DSA:2.40.30.10 186 285 1.3E-34 T 12-10-2018 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Pfam PF00679 Elongation factor G C-terminus 399 482 4.7E-20 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.1E-49 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.2E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_26880 53f8a796125176d36d2544c3f023189f 597 SUPERFAMILY SSF50447 165 288 2.7E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Gene3D G3DSA:3.40.50.300 1 185 7.9E-71 T 12-10-2018 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 SMART SM00838 398 486 0.0048 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Gene3D G3DSA:3.30.70.2570 479 553 5.4E-33 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily K04M3_26880 53f8a796125176d36d2544c3f023189f 597 SUPERFAMILY SSF54980 399 493 2.73E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_26880 53f8a796125176d36d2544c3f023189f 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.2E-17 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 12-10-2018 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Gene3D G3DSA:3.30.70.3380 368 478 1.1E-39 T 12-10-2018 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.619 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.7E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 SUPERFAMILY SSF52540 2 205 1.29E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26880 53f8a796125176d36d2544c3f023189f 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_26880 53f8a796125176d36d2544c3f023189f 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_26880 53f8a796125176d36d2544c3f023189f 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_10210 821f912e534a99caa551bec1513797c8 236 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_10210 821f912e534a99caa551bec1513797c8 236 Gene3D G3DSA:1.10.10.10 136 236 5.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10210 821f912e534a99caa551bec1513797c8 236 SUPERFAMILY SSF52172 2 124 2.85E-37 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_10210 821f912e534a99caa551bec1513797c8 236 SMART SM00448 3 113 1.3E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_10210 821f912e534a99caa551bec1513797c8 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_10210 821f912e534a99caa551bec1513797c8 236 Gene3D G3DSA:3.40.50.2300 1 135 2.7E-34 T 12-10-2018 K04M3_10210 821f912e534a99caa551bec1513797c8 236 SUPERFAMILY SSF46894 133 234 1.59E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_10210 821f912e534a99caa551bec1513797c8 236 SMART SM00862 157 233 3.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_47560 ff21e1c1f175a28c5c1ef31179164248 462 Gene3D G3DSA:2.20.200.10 103 346 2.8E-105 T 12-10-2018 K04M3_47560 ff21e1c1f175a28c5c1ef31179164248 462 SUPERFAMILY SSF56954 3 457 1.7E-93 T 12-10-2018 K04M3_47560 ff21e1c1f175a28c5c1ef31179164248 462 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 456 1.4E-82 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 K04M3_47560 ff21e1c1f175a28c5c1ef31179164248 462 Pfam PF02321 Outer membrane efflux protein 66 247 4.9E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_47560 ff21e1c1f175a28c5c1ef31179164248 462 Pfam PF02321 Outer membrane efflux protein 281 455 4.8E-19 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_47560 ff21e1c1f175a28c5c1ef31179164248 462 Gene3D G3DSA:1.20.1600.10 56 456 2.8E-105 T 12-10-2018 K04M3_18800 5ee0777db6eca28a18eaacfb9a57a6a0 268 SMART SM00342 179 261 3.0E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_18800 5ee0777db6eca28a18eaacfb9a57a6a0 268 SUPERFAMILY SSF46689 216 263 7.53E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_18800 5ee0777db6eca28a18eaacfb9a57a6a0 268 Gene3D G3DSA:1.10.10.60 163 267 2.6E-19 T 12-10-2018 K04M3_18800 5ee0777db6eca28a18eaacfb9a57a6a0 268 Gene3D G3DSA:2.60.120.10 3 105 5.0E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_18800 5ee0777db6eca28a18eaacfb9a57a6a0 268 Pfam PF12833 Helix-turn-helix domain 185 260 9.8E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_18800 5ee0777db6eca28a18eaacfb9a57a6a0 268 SUPERFAMILY SSF51182 33 194 5.74E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_42840 a705fa5bd6aeb3e34976a81221e00b9d 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 230 1.8E-25 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_18110 66ea52aa103de3c39216b19edaa826b7 158 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 1.3E-12 T 12-10-2018 IPR000182 GNAT domain K04M3_18110 66ea52aa103de3c39216b19edaa826b7 158 SUPERFAMILY SSF55729 1 158 6.73E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_18110 66ea52aa103de3c39216b19edaa826b7 158 Gene3D G3DSA:3.40.630.30 1 158 3.4E-25 T 12-10-2018 K04M3_14920 7edd711a27ce0ba3d656b36d2baf9261 472 PIRSF PIRSF002457 1 472 8.2E-120 T 12-10-2018 IPR030676 Citrate carrier CitT-related K04M3_14920 7edd711a27ce0ba3d656b36d2baf9261 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 3.9E-78 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 K04M3_14920 7edd711a27ce0ba3d656b36d2baf9261 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 5.8E-50 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 K04M3_23980 25ea07c6229ce1fe624595960c703d8e 241 PIRSF PIRSF005650 4 241 7.4E-89 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 K04M3_23980 25ea07c6229ce1fe624595960c703d8e 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 K04M3_23980 25ea07c6229ce1fe624595960c703d8e 241 Pfam PF00696 Amino acid kinase family 11 219 4.7E-27 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_23980 25ea07c6229ce1fe624595960c703d8e 241 Gene3D G3DSA:3.40.1160.10 3 241 2.1E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_23980 25ea07c6229ce1fe624595960c703d8e 241 SUPERFAMILY SSF53633 7 239 4.71E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_23980 25ea07c6229ce1fe624595960c703d8e 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.6E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 K04M3_26190 7985a6a7fbfb21f8bcd6a5768528cc69 176 Gene3D G3DSA:3.40.50.2020 1 176 6.8E-66 T 12-10-2018 K04M3_26190 7985a6a7fbfb21f8bcd6a5768528cc69 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.1E-74 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 K04M3_26190 7985a6a7fbfb21f8bcd6a5768528cc69 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 1.1E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 K04M3_26190 7985a6a7fbfb21f8bcd6a5768528cc69 176 SUPERFAMILY SSF53271 3 175 1.1E-55 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 3.4E-164 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.3E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 SUPERFAMILY SSF52096 5 318 1.72E-105 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 Gene3D G3DSA:3.90.226.10 4 319 3.2E-120 T 12-10-2018 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.724 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_23840 f62414fa8ec251bd3dac2e96bf0d329b 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 3.9E-63 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 SUPERFAMILY SSF46785 4 117 8.39E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.3E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 Gene3D G3DSA:3.40.190.10 103 289 6.2E-58 T 12-10-2018 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 Gene3D G3DSA:1.10.10.10 9 98 3.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 Gene3D G3DSA:3.40.190.10 166 263 6.2E-58 T 12-10-2018 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 SUPERFAMILY SSF53850 97 291 2.71E-24 T 12-10-2018 K04M3_06180 fcd7b2d163f2ae6ab1b5edfb43f5f0e4 293 Pfam PF03466 LysR substrate binding domain 94 292 4.5E-20 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 Gene3D G3DSA:1.10.287.130 440 513 1.4E-21 T 12-10-2018 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 Pfam PF00672 HAMP domain 349 395 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 SUPERFAMILY SSF103190 178 310 3.92E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 SUPERFAMILY SSF47384 442 512 9.81E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 SUPERFAMILY SSF55874 505 667 1.01E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 3.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 SMART SM00388 448 515 2.3E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 Gene3D G3DSA:3.30.565.10 520 672 2.0E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 Pfam PF17202 Single cache domain 3 204 318 2.1E-28 T 12-10-2018 IPR033463 Single cache domain 3 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 667 8.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 SMART SM00387 558 669 1.1E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 5.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 5.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 5.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_15810 a0d22ddfdac63600d3e2f8d40ee3b973 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 5.4E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_33110 2b01867e33eabb297b01ef49d450ad32 148 Gene3D G3DSA:3.30.310.70 23 145 2.8E-14 T 12-10-2018 IPR035923 TT1751-like domain superfamily K04M3_33110 2b01867e33eabb297b01ef49d450ad32 148 Pfam PF03625 Domain of unknown function DUF302 54 116 3.9E-20 T 12-10-2018 IPR005180 Domain of unknown function DUF302 K04M3_33110 2b01867e33eabb297b01ef49d450ad32 148 SUPERFAMILY SSF103247 24 146 4.58E-35 T 12-10-2018 IPR035923 TT1751-like domain superfamily K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 4.1E-30 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 Gene3D G3DSA:3.40.190.10 102 191 9.1E-68 T 12-10-2018 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 Gene3D G3DSA:3.30.70.120 225 298 9.9E-34 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.6E-24 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 SUPERFAMILY SSF53850 5 222 8.87E-66 T 12-10-2018 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.167 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 2.4E-54 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 Gene3D G3DSA:3.40.190.10 6 219 9.1E-68 T 12-10-2018 K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 SUPERFAMILY SSF54913 225 297 5.11E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta K04M3_11100 407a4f03d03242fa2df9188daca955d0 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.1E-43 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 K04M3_52710 347676a975176a1a3806885ef688d9f9 303 SUPERFAMILY SSF56596 10 296 3.53E-15 T 12-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 K04M3_52710 347676a975176a1a3806885ef688d9f9 303 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 18 181 2.1E-8 T 12-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 K04M3_52710 347676a975176a1a3806885ef688d9f9 303 Gene3D G3DSA:3.50.14.10 3 193 9.1E-9 T 12-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 K04M3_48320 f5d8074506685a78e3ab0ad3284c184c 697 SUPERFAMILY SSF56935 20 697 3.34E-120 T 12-10-2018 K04M3_48320 f5d8074506685a78e3ab0ad3284c184c 697 Pfam PF00593 TonB dependent receptor 237 696 3.8E-52 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_48320 f5d8074506685a78e3ab0ad3284c184c 697 Gene3D G3DSA:2.40.170.20 161 697 3.7E-102 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_48320 f5d8074506685a78e3ab0ad3284c184c 697 Gene3D G3DSA:2.170.130.10 35 160 3.1E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_48320 f5d8074506685a78e3ab0ad3284c184c 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 150 1.5E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_48320 f5d8074506685a78e3ab0ad3284c184c 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 696 2.3E-93 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_26470 8b5fb88f3e610090ddf6052966a2c473 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.0E-158 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 K04M3_26470 8b5fb88f3e610090ddf6052966a2c473 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 5.6E-169 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 K04M3_26470 8b5fb88f3e610090ddf6052966a2c473 376 PIRSF PIRSF015658 1 376 4.3E-178 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 SUPERFAMILY SSF118215 5 406 2.09E-105 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 4.6E-115 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 Gene3D G3DSA:1.10.3860.10 1 421 1.0E-113 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 5.2E-37 T 12-10-2018 K04M3_06320 fcde3bcb225d7ef91e37e1e031cca090 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 5.2E-37 T 12-10-2018 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.5E-89 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.4E-17 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 SMART SM01185 69 124 1.6E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.1E-19 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.40.50.140 67 130 4.2E-15 T 12-10-2018 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.40.50.140 131 188 1.9E-19 T 12-10-2018 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.4E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-15 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 PIRSF PIRSF005901 1 188 1.4E-58 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.081 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50249 67 129 4.71E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50104 1 65 9.63E-12 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_20110 049b2149fc50c6b524805dea436e4f69 188 SMART SM00841 132 187 2.2E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 K04M3_12430 564252ea03bb48db5a99ceb7fcef8a3c 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 3.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_12430 564252ea03bb48db5a99ceb7fcef8a3c 262 SUPERFAMILY SSF46689 28 86 1.39E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_12430 564252ea03bb48db5a99ceb7fcef8a3c 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 4.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_12430 564252ea03bb48db5a99ceb7fcef8a3c 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 4.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_12430 564252ea03bb48db5a99ceb7fcef8a3c 262 Gene3D G3DSA:1.10.357.10 22 212 9.7E-16 T 12-10-2018 K04M3_33250 f0d354d64da867d65d911c89f342cf53 157 Gene3D G3DSA:1.10.3470.10 1 157 7.0E-51 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_33250 f0d354d64da867d65d911c89f342cf53 157 Pfam PF01032 FecCD transport family 4 154 6.2E-48 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_33250 f0d354d64da867d65d911c89f342cf53 157 SUPERFAMILY SSF81345 3 154 8.76E-46 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_05690 76ea85b5d22176a4ba87555136fe5159 239 Gene3D G3DSA:3.40.1280.10 1 163 1.0E-61 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_05690 76ea85b5d22176a4ba87555136fe5159 239 Gene3D G3DSA:1.10.8.590 166 239 1.3E-27 T 12-10-2018 K04M3_05690 76ea85b5d22176a4ba87555136fe5159 239 PIRSF PIRSF004808 1 239 1.5E-72 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 K04M3_05690 76ea85b5d22176a4ba87555136fe5159 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 8.4E-84 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 K04M3_05690 76ea85b5d22176a4ba87555136fe5159 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.5E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 K04M3_05690 76ea85b5d22176a4ba87555136fe5159 239 SUPERFAMILY SSF75217 5 175 4.32E-37 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 PIRSF PIRSF003180 1 403 1.7E-169 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 SUPERFAMILY SSF109604 181 400 4.71E-43 T 12-10-2018 K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 Pfam PF08668 HDOD domain 205 325 1.1E-12 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 Gene3D G3DSA:3.20.20.450 3 194 8.1E-18 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 Gene3D G3DSA:1.10.3210.10 195 403 7.5E-22 T 12-10-2018 K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 Pfam PF00563 EAL domain 64 190 4.0E-15 T 12-10-2018 IPR001633 EAL domain K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 SUPERFAMILY SSF141868 5 193 2.09E-28 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_11190 d7d95f3128e2b7ff16d0f91322dc38c3 404 SMART SM00052 2 195 0.0011 T 12-10-2018 IPR001633 EAL domain K04M3_27310 4f84aa951ab44aa581c01bc1f6dce43c 143 Gene3D G3DSA:2.60.40.3340 14 143 1.3E-40 T 12-10-2018 K04M3_27310 4f84aa951ab44aa581c01bc1f6dce43c 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 1.6E-48 T 12-10-2018 IPR025218 Domain of unknown function DUF4426 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Gene3D G3DSA:3.30.70.80 37 125 2.2E-5 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Pfam PF02225 PA domain 376 465 6.7E-7 T 12-10-2018 IPR003137 PA domain K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Gene3D G3DSA:3.40.50.200 144 545 1.8E-158 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Pfam PF05922 Peptidase inhibitor I9 43 120 2.9E-4 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Pfam PF00082 Subtilase family 146 333 6.1E-28 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Gene3D G3DSA:3.50.30.30 335 480 1.8E-158 T 12-10-2018 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 SUPERFAMILY SSF49785 568 675 3.49E-21 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 7.1E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 7.1E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 7.1E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 SUPERFAMILY SSF52743 123 546 2.39E-104 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Gene3D G3DSA:2.60.120.260 560 676 1.6E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Pfam PF00082 Subtilase family 478 538 9.6E-14 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site K04M3_47520 ad2532646c9c36bf5a03cabd14844ea1 676 Pfam PF01483 Proprotein convertase P-domain 596 675 4.9E-22 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Gene3D G3DSA:1.20.5.70 339 372 4.6E-19 T 12-10-2018 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Gene3D G3DSA:3.10.560.10 49 336 2.7E-118 T 12-10-2018 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Pfam PF10531 SLBB domain 169 215 5.2E-9 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Pfam PF10531 SLBB domain 252 305 6.4E-6 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Pfam PF02563 Polysaccharide biosynthesis/export protein 78 161 1.8E-26 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Gene3D G3DSA:3.30.1950.10 84 165 2.7E-118 T 12-10-2018 K04M3_33910 b747a4d6399dc00b6ed9dec982d0ca1e 372 Gene3D G3DSA:3.10.560.10 62 250 2.7E-118 T 12-10-2018 K04M3_40260 9c3f9c1b13e638d3346afb7f26e621b6 276 PIRSF PIRSF015626 20 276 3.2E-65 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 K04M3_40260 9c3f9c1b13e638d3346afb7f26e621b6 276 SUPERFAMILY SSF53927 36 274 1.44E-65 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_40260 9c3f9c1b13e638d3346afb7f26e621b6 276 Gene3D G3DSA:3.40.140.10 133 275 1.8E-37 T 12-10-2018 K04M3_40260 9c3f9c1b13e638d3346afb7f26e621b6 276 Pfam PF02634 FdhD/NarQ family 42 273 3.8E-61 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 K04M3_40260 9c3f9c1b13e638d3346afb7f26e621b6 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 273 7.5E-46 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 K04M3_40260 9c3f9c1b13e638d3346afb7f26e621b6 276 Gene3D G3DSA:3.10.20.10 43 128 3.9E-8 T 12-10-2018 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 8.5E-133 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 SUPERFAMILY SSF52540 32 222 1.09E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 SUPERFAMILY SSF48019 243 361 8.42E-33 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Gene3D G3DSA:1.20.272.10 242 361 1.5E-39 T 12-10-2018 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Gene3D G3DSA:3.30.300.150 558 683 5.4E-41 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 3.1E-32 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 SMART SM00382 37 179 9.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 481 558 1.6E-21 T 12-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Gene3D G3DSA:3.40.50.300 13 177 1.4E-101 T 12-10-2018 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Gene3D G3DSA:1.10.8.60 8 240 1.4E-101 T 12-10-2018 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 560 698 7.7E-50 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_22180 07ed6c5a221496b5a429542bbbca0687 701 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.6E-44 T 12-10-2018 K04M3_28000 d030860104f61b5115de95e044ae84af 164 Gene3D G3DSA:2.60.450.10 20 157 2.0E-41 T 12-10-2018 K04M3_28000 d030860104f61b5115de95e044ae84af 164 Pfam PF03968 OstA-like protein 30 141 4.2E-29 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal K04M3_28000 d030860104f61b5115de95e044ae84af 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.456 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 K04M3_28000 d030860104f61b5115de95e044ae84af 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 7.0E-47 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 K04M3_03230 d91f1a74497b721f9efad5b6937b22c3 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_03230 d91f1a74497b721f9efad5b6937b22c3 315 SUPERFAMILY SSF53850 95 301 2.9E-42 T 12-10-2018 K04M3_03230 d91f1a74497b721f9efad5b6937b22c3 315 Pfam PF03466 LysR substrate binding domain 95 296 2.8E-40 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_03230 d91f1a74497b721f9efad5b6937b22c3 315 SUPERFAMILY SSF46785 9 95 2.46E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_03230 d91f1a74497b721f9efad5b6937b22c3 315 Gene3D G3DSA:1.10.10.10 9 99 6.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03230 d91f1a74497b721f9efad5b6937b22c3 315 Gene3D G3DSA:3.40.190.290 100 299 7.7E-58 T 12-10-2018 K04M3_37680 a8d355bb482023884168276b8a471306 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 3.2E-15 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 K04M3_37680 a8d355bb482023884168276b8a471306 102 Pfam PF14375 Cysteine-rich CWC 53 97 2.0E-6 T 12-10-2018 IPR032720 Cysteine-rich CWC K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 Gene3D G3DSA:3.30.559.10 176 381 2.1E-49 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 380 2.2E-55 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 SUPERFAMILY SSF47005 122 164 4.32E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 Pfam PF00364 Biotin-requiring enzyme 3 75 5.5E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 Pfam PF02817 e3 binding domain 129 161 1.8E-9 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 Gene3D G3DSA:4.10.320.10 118 166 9.6E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 Gene3D G3DSA:2.40.50.100 2 80 6.1E-23 T 12-10-2018 K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 SUPERFAMILY SSF51230 2 91 8.38E-25 T 12-10-2018 IPR011053 Single hybrid motif K04M3_38570 e3a77bc5338bf98c8413ea73076ef0e2 382 SUPERFAMILY SSF52777 165 380 6.23E-55 T 12-10-2018 K04M3_35890 640d50ead8231bba11a88c04e3517ade 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 466 9.6E-153 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K04M3_35890 640d50ead8231bba11a88c04e3517ade 466 Pfam PF13727 CoA-binding domain 66 240 2.3E-37 T 12-10-2018 K04M3_35890 640d50ead8231bba11a88c04e3517ade 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 466 3.3E-171 T 12-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 K04M3_35890 640d50ead8231bba11a88c04e3517ade 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.5E-67 T 12-10-2018 IPR003362 Bacterial sugar transferase K04M3_35890 640d50ead8231bba11a88c04e3517ade 466 Gene3D G3DSA:3.40.50.720 142 265 1.8E-11 T 12-10-2018 K04M3_35890 640d50ead8231bba11a88c04e3517ade 466 SUPERFAMILY SSF51735 143 270 1.42E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08560 d2a9feb592eb6ce34d0ffe36821e7362 198 Pfam PF06185 YecM protein 13 196 9.3E-69 T 12-10-2018 IPR010393 Protein of unknown function DUF991 K04M3_08560 d2a9feb592eb6ce34d0ffe36821e7362 198 SUPERFAMILY SSF54593 4 197 1.07E-67 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_08560 d2a9feb592eb6ce34d0ffe36821e7362 198 Gene3D G3DSA:3.10.180.10 7 198 2.5E-62 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Gene3D G3DSA:3.10.350.10 473 521 1.5E-13 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SUPERFAMILY SSF54106 417 462 4.05E-11 T 12-10-2018 K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Pfam PF01464 Transglycosylase SLT domain 126 227 2.3E-22 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 134 162 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Gene3D G3DSA:3.10.350.10 341 395 1.5E-15 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SUPERFAMILY SSF54106 473 520 3.27E-10 T 12-10-2018 K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SUPERFAMILY SSF53955 113 271 2.39E-41 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Gene3D G3DSA:1.10.530.10 110 262 1.0E-28 T 12-10-2018 K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Gene3D G3DSA:3.10.350.10 402 470 3.9E-15 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SMART SM00257 418 462 9.0E-12 T 12-10-2018 IPR018392 LysM domain K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SMART SM00257 475 519 4.5E-10 T 12-10-2018 IPR018392 LysM domain K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SMART SM00257 344 387 4.5E-15 T 12-10-2018 IPR018392 LysM domain K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 SUPERFAMILY SSF54106 344 387 5.62E-11 T 12-10-2018 K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Pfam PF01476 LysM domain 345 387 5.0E-13 T 12-10-2018 IPR018392 LysM domain K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Pfam PF01476 LysM domain 476 518 1.5E-10 T 12-10-2018 IPR018392 LysM domain K04M3_23780 e6bd2d6b103a7ff343302bec6e287e8c 527 Pfam PF01476 LysM domain 419 462 1.1E-11 T 12-10-2018 IPR018392 LysM domain K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 K04M3_02700 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 Gene3D G3DSA:3.40.50.720 2 206 3.5E-79 T 12-10-2018 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 SUPERFAMILY SSF48179 205 382 2.38E-46 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.8E-23 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 SUPERFAMILY SSF51735 3 203 2.89E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 Gene3D G3DSA:1.10.1040.10 208 382 1.3E-65 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 375 7.9E-60 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.203 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 K04M3_03680 4fcb143d8402cc831d4bd1fb9a22d091 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 K04M3_36910 7ad9a22722da54c3b1cde4a0cadb675c 179 Pfam PF08534 Redoxin 8 148 9.9E-20 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 K04M3_36910 7ad9a22722da54c3b1cde4a0cadb675c 179 SUPERFAMILY SSF52833 7 176 1.83E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_36910 7ad9a22722da54c3b1cde4a0cadb675c 179 Gene3D G3DSA:3.40.30.10 4 165 1.2E-21 T 12-10-2018 K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 SMART SM00738 1 101 5.7E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 SUPERFAMILY SSF82679 1 101 3.01E-29 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 3.3E-61 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 SUPERFAMILY SSF50104 115 163 2.11E-5 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Gene3D G3DSA:3.30.70.940 1 165 1.2E-52 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.204 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 K04M3_08210 a3f3c8c1bad99111bdb0e4c245fa62b2 166 Pfam PF02357 Transcription termination factor nusG 2 95 1.0E-19 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 K04M3_21840 d0a7458b257ed584f62f372e00d2af71 435 SUPERFAMILY SSF47226 317 421 1.24E-17 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_21840 d0a7458b257ed584f62f372e00d2af71 435 Pfam PF01627 Hpt domain 339 415 4.4E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_21840 d0a7458b257ed584f62f372e00d2af71 435 Gene3D G3DSA:1.20.120.160 317 427 2.2E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 3.3E-153 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 Gene3D G3DSA:3.40.50.150 228 425 1.7E-71 T 12-10-2018 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 SUPERFAMILY SSF53335 139 424 1.82E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 Gene3D G3DSA:1.10.940.10 1 142 9.1E-45 T 12-10-2018 IPR035926 NusB-like superfamily K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 Gene3D G3DSA:3.30.70.1170 170 227 6.3E-27 T 12-10-2018 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 Gene3D G3DSA:1.10.287.730 143 169 7.7E-14 T 12-10-2018 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 12-10-2018 IPR035926 NusB-like superfamily K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 Pfam PF01029 NusB family 1 123 2.1E-24 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 K04M3_31970 87c2a102fbde9d6d5cca3dbe16e1f991 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 2.4E-69 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 Gene3D G3DSA:3.40.50.970 326 537 4.6E-84 T 12-10-2018 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.4E-166 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 SUPERFAMILY SSF52518 6 329 3.48E-119 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 SMART SM00861 354 525 3.7E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 Gene3D G3DSA:3.40.50.920 538 664 6.0E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 SUPERFAMILY SSF52922 533 664 3.53E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 Gene3D G3DSA:3.40.50.970 1 325 1.4E-130 T 12-10-2018 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.3E-46 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 Pfam PF02780 Transketolase, C-terminal domain 544 655 4.8E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain K04M3_27160 06280f77d7edddb0ea4997ddfa9f5a8c 664 SUPERFAMILY SSF52518 333 526 2.61E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_42040 a9bbe06bb02cee1f71ccce37b5a4604e 200 PIRSF PIRSF011489 1 196 6.8E-82 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 K04M3_42040 a9bbe06bb02cee1f71ccce37b5a4604e 200 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 2.1E-29 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 SMART SM00347 23 124 1.0E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 Gene3D G3DSA:1.10.10.10 2 139 4.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 Pfam PF01047 MarR family 31 88 1.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_25570 9073feadb2344d732dcf32b5bf32e239 140 SUPERFAMILY SSF46785 11 137 5.89E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 Gene3D G3DSA:2.40.500.20 83 194 3.5E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.7E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.0E-38 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 PIRSF PIRSF000349 1 194 4.5E-84 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 SUPERFAMILY SSF54719 84 193 2.75E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 Gene3D G3DSA:1.10.287.990 20 82 8.8E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_21750 5e080358437d671c9cfa30ee419eac1e 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 PIRSF PIRSF001363 9 542 5.1E-251 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 ProSitePatterns PS00510 Malate synthase signature. 275 290 - T 12-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 32 541 9.9E-264 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 Gene3D G3DSA:3.20.20.360 10 420 4.8E-190 T 12-10-2018 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 Pfam PF01274 Malate synthase 23 541 6.2E-202 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 SUPERFAMILY SSF51645 20 541 3.14E-187 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_05570 d9e2097d2a534bc2a071bd8402364236 542 Gene3D G3DSA:1.20.1220.12 421 542 4.2E-48 T 12-10-2018 K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 Pfam PF05547 Immune inhibitor A peptidase M6 168 376 3.4E-15 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 SUPERFAMILY SSF49299 775 871 6.28E-6 T 12-10-2018 IPR035986 PKD domain superfamily K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 147 435 7.1E-73 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 Gene3D G3DSA:2.60.40.10 785 869 6.0E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 ProSitePatterns PS00018 EF-hand calcium-binding domain. 247 259 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 973 993 0.0013 T 12-10-2018 IPR020008 GlyGly-CTERM domain K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 SUPERFAMILY SSF55486 293 358 4.79E-7 T 12-10-2018 K04M3_09020 840bc40c4b9b340742ed42aa583194bb 994 PIRSF PIRSF036597 3 994 0.0 T 12-10-2018 IPR012045 Peptidase M6, unassigned InhA-related K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 8.6E-40 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 Gene3D G3DSA:3.40.47.10 1 255 8.1E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 SUPERFAMILY SSF53901 4 252 1.18E-54 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 3.3E-28 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 SUPERFAMILY SSF53901 215 406 6.1E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 SMART SM00825 Beta-ketoacyl synthase 5 377 2.4E-11 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 Gene3D G3DSA:3.40.47.10 261 407 1.2E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08770 c49ba5ae2a28a74d49c665141fc70cb6 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site K04M3_28380 77d44579a454f34722c52593ab8ed449 481 SUPERFAMILY SSF53067 42 154 4.92E-11 T 12-10-2018 K04M3_28380 77d44579a454f34722c52593ab8ed449 481 PIRSF PIRSF028153 1 481 4.0E-226 T 12-10-2018 IPR016871 MSHA biogenesis protein, MshI K04M3_04450 70ba36c70b1fcf8ea9e473af186f7e88 284 Gene3D G3DSA:3.40.190.290 91 282 5.5E-8 T 12-10-2018 K04M3_04450 70ba36c70b1fcf8ea9e473af186f7e88 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.7E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_04450 70ba36c70b1fcf8ea9e473af186f7e88 284 SUPERFAMILY SSF46785 4 83 7.69E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_04450 70ba36c70b1fcf8ea9e473af186f7e88 284 Gene3D G3DSA:1.10.10.10 1 90 1.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_04450 70ba36c70b1fcf8ea9e473af186f7e88 284 Pfam PF03466 LysR substrate binding domain 90 276 5.4E-14 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_04450 70ba36c70b1fcf8ea9e473af186f7e88 284 SUPERFAMILY SSF53850 89 280 2.35E-17 T 12-10-2018 K04M3_06790 16ba6d06a4f24ebf1950eb5ec42f50e2 181 Gene3D G3DSA:3.40.1580.20 1 181 4.5E-69 T 12-10-2018 IPR038228 Syd superfamily K04M3_06790 16ba6d06a4f24ebf1950eb5ec42f50e2 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 5.9E-70 T 12-10-2018 IPR009948 Syd GO:0009898 K04M3_06790 16ba6d06a4f24ebf1950eb5ec42f50e2 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.021 T 12-10-2018 IPR009948 Syd GO:0009898 K04M3_25550 4648f5d731de2a8a4e6972346b9ab2f5 296 Pfam PF01136 Peptidase family U32 85 241 4.2E-12 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_47220 2eca0aaed04163eb531b3d0ca4e4f564 145 Gene3D G3DSA:1.20.58.300 6 138 3.9E-20 T 12-10-2018 K04M3_47220 2eca0aaed04163eb531b3d0ca4e4f564 145 Pfam PF05130 FlgN protein 8 132 9.8E-15 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 K04M3_47220 2eca0aaed04163eb531b3d0ca4e4f564 145 SUPERFAMILY SSF140566 8 136 7.32E-27 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 Gene3D G3DSA:3.65.10.10 20 224 1.3E-159 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.436 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 PIRSF PIRSF000505 1 426 7.5E-156 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 SUPERFAMILY SSF55205 1 424 1.2E-143 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 Gene3D G3DSA:3.65.10.10 242 419 1.3E-159 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 7.7E-156 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 K04M3_10100 754d714dd04505174ce84a3d834e8f1b 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.0E-141 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 SUPERFAMILY SSF81464 15 117 7.68E-28 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 Gene3D G3DSA:1.10.760.10 264 387 4.1E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 Gene3D G3DSA:2.60.40.420 120 259 6.2E-54 T 12-10-2018 IPR008972 Cupredoxin K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 6.7E-61 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 8.3E-36 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 SUPERFAMILY SSF49503 121 260 2.5E-53 T 12-10-2018 IPR008972 Cupredoxin K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 356 4.4E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 Gene3D G3DSA:1.10.287.90 25 119 1.2E-25 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 30 108 1.3E-14 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 SUPERFAMILY SSF46626 225 367 1.3E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 5.1E-40 T 12-10-2018 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 5.1E-40 T 12-10-2018 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 5.1E-40 T 12-10-2018 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 5.1E-40 T 12-10-2018 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 5.1E-40 T 12-10-2018 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 5.1E-40 T 12-10-2018 K04M3_37240 0f6bec923cb7392f5429fdbec0a3d18c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 5.1E-40 T 12-10-2018 K04M3_01280 92356fcec489c9f142fd4ba474851d1c 163 Pfam PF04612 Type II secretion system (T2SS), protein M 6 162 1.9E-53 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 K04M3_01280 92356fcec489c9f142fd4ba474851d1c 163 Gene3D G3DSA:3.30.1360.100 85 163 5.6E-31 T 12-10-2018 K04M3_01280 92356fcec489c9f142fd4ba474851d1c 163 SUPERFAMILY SSF103054 85 162 8.89E-25 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily K04M3_01280 92356fcec489c9f142fd4ba474851d1c 163 PIRSF PIRSF006291 2 162 3.7E-40 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 Gene3D G3DSA:3.40.50.10260 5 219 2.6E-58 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 214 5.5E-51 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 Pfam PF03853 YjeF-related protein N-terminus 32 193 4.1E-43 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 Gene3D G3DSA:3.40.1190.20 223 508 1.8E-79 T 12-10-2018 IPR029056 Ribokinase-like K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 SUPERFAMILY SSF64153 8 250 1.44E-63 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 PIRSF PIRSF017184 7 513 1.0E-131 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 SUPERFAMILY SSF53613 229 507 4.91E-71 T 12-10-2018 IPR029056 Ribokinase-like K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 Pfam PF01256 Carbohydrate kinase 253 502 6.7E-53 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 506 2.3E-60 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.563 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site K04M3_44740 3ebb9f30214a30a1416c50b39951e6d6 513 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.666 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 K04M3_49100 35b8912394aa9029e43dc153bee1fbba 382 SMART SM00267 180 362 5.5E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_49100 35b8912394aa9029e43dc153bee1fbba 382 Gene3D G3DSA:3.30.70.270 186 375 3.4E-50 T 12-10-2018 K04M3_49100 35b8912394aa9029e43dc153bee1fbba 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 6.1E-41 T 12-10-2018 IPR000160 GGDEF domain K04M3_49100 35b8912394aa9029e43dc153bee1fbba 382 SUPERFAMILY SSF55073 196 363 6.91E-41 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_49100 35b8912394aa9029e43dc153bee1fbba 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 360 2.5E-41 T 12-10-2018 IPR000160 GGDEF domain K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 Gene3D G3DSA:3.40.50.180 177 366 1.9E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 Gene3D G3DSA:3.40.50.2300 2 131 1.0E-31 T 12-10-2018 K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 SMART SM00448 3 126 1.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 SUPERFAMILY SSF52172 2 109 7.54E-27 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 PIRSF PIRSF000876 1 368 2.4E-128 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 38.945 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 SUPERFAMILY SSF52738 179 364 7.59E-63 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 Pfam PF01339 CheB methylesterase 185 362 3.1E-58 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 K04M3_22660 b229c40efca28cf9fd8288b05e595118 370 Pfam PF00072 Response regulator receiver domain 5 109 2.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_46090 647432e2ae2cfb420b255a4f4ef4407c 959 SUPERFAMILY SSF48208 254 678 2.13E-36 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 K04M3_46090 647432e2ae2cfb420b255a4f4ef4407c 959 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 364 509 7.6E-7 T 12-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain K04M3_46090 647432e2ae2cfb420b255a4f4ef4407c 959 Gene3D G3DSA:1.50.10.10 279 588 3.1E-28 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 K04M3_12690 329b77668ac018e2d9729432b17345c5 405 Gene3D G3DSA:3.40.50.10190 186 280 1.9E-15 T 12-10-2018 IPR036420 BRCT domain superfamily K04M3_12690 329b77668ac018e2d9729432b17345c5 405 SUPERFAMILY SSF52113 186 265 1.24E-9 T 12-10-2018 IPR036420 BRCT domain superfamily K04M3_12690 329b77668ac018e2d9729432b17345c5 405 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 188 237 5.9E-9 T 12-10-2018 IPR001357 BRCT domain K04M3_26140 85e27d2fc592c3af518e216686f946ec 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.383 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 K04M3_26140 85e27d2fc592c3af518e216686f946ec 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 299 2.9E-69 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_26140 85e27d2fc592c3af518e216686f946ec 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 2.3E-133 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 K04M3_26140 85e27d2fc592c3af518e216686f946ec 309 PIRSF PIRSF026649 4 306 8.8E-72 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_21690 ab190358cff60f049e7111510f3b31d8 214 Gene3D G3DSA:3.30.420.10 9 214 1.0E-53 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_21690 ab190358cff60f049e7111510f3b31d8 214 SMART SM00479 18 204 6.2E-31 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_21690 ab190358cff60f049e7111510f3b31d8 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.609 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 K04M3_21690 ab190358cff60f049e7111510f3b31d8 214 Pfam PF00929 Exonuclease 20 195 3.0E-46 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_21690 ab190358cff60f049e7111510f3b31d8 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.3E-100 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 K04M3_21690 ab190358cff60f049e7111510f3b31d8 214 SUPERFAMILY SSF53098 10 208 3.09E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_15280 de6a9ec9ef39f0e4c3474258766ddcef 646 SUPERFAMILY SSF56300 154 556 3.8E-12 T 12-10-2018 K04M3_15280 de6a9ec9ef39f0e4c3474258766ddcef 646 Gene3D G3DSA:3.60.21.70 316 561 5.3E-11 T 12-10-2018 IPR038607 PhoD-like superfamily K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 Gene3D G3DSA:1.10.10.60 249 301 2.2E-15 T 12-10-2018 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 SUPERFAMILY SSF46689 251 301 8.06E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 Pfam PF12833 Helix-turn-helix domain 221 300 1.0E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 Gene3D G3DSA:3.40.50.880 1 185 5.8E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 SUPERFAMILY SSF46689 199 249 8.24E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 Gene3D G3DSA:1.10.10.60 195 248 3.4E-12 T 12-10-2018 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 SMART SM00342 215 298 1.1E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 Pfam PF01965 DJ-1/PfpI family 57 159 4.3E-10 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 K04M3_16770 9eaa1f8e52ebb4fecfdba4ba0400181f 303 SUPERFAMILY SSF52317 1 178 3.6E-27 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_48710 bccefd47da74c4ce8d67a1e8e1c0c483 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 5.0E-157 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 K04M3_48710 bccefd47da74c4ce8d67a1e8e1c0c483 378 Gene3D G3DSA:3.90.1510.10 42 276 3.9E-139 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 K04M3_48710 bccefd47da74c4ce8d67a1e8e1c0c483 378 SUPERFAMILY SSF110738 1 376 1.15E-139 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 K04M3_48710 bccefd47da74c4ce8d67a1e8e1c0c483 378 Gene3D G3DSA:3.40.50.10350 1 362 3.9E-139 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold K04M3_48710 bccefd47da74c4ce8d67a1e8e1c0c483 378 Pfam PF02595 Glycerate kinase family 3 374 5.3E-147 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 K04M3_48710 bccefd47da74c4ce8d67a1e8e1c0c483 378 PIRSF PIRSF006078 1 377 1.2E-133 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 K04M3_19900 c2e7d71fe05f7eada7dd24afe3c64883 207 Pfam PF07719 Tetratricopeptide repeat 85 115 3.2E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 K04M3_19900 c2e7d71fe05f7eada7dd24afe3c64883 207 SUPERFAMILY SSF48452 75 190 1.52E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_19900 c2e7d71fe05f7eada7dd24afe3c64883 207 Gene3D G3DSA:1.25.40.10 48 117 3.6E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_19900 c2e7d71fe05f7eada7dd24afe3c64883 207 Gene3D G3DSA:1.25.40.10 118 206 1.2E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 348 9.4E-114 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 Gene3D G3DSA:3.40.50.300 1 201 2.4E-69 T 12-10-2018 K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 SMART SM00487 15 211 1.7E-22 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 SUPERFAMILY SSF52540 60 338 5.01E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 Gene3D G3DSA:1.10.10.10 501 640 1.7E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 Pfam PF00270 DEAD/DEAH box helicase 22 181 3.1E-15 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 Gene3D G3DSA:3.40.50.300 203 450 2.8E-46 T 12-10-2018 K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 Pfam PF00271 Helicase conserved C-terminal domain 219 325 7.5E-19 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 SMART SM00490 245 326 6.4E-28 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site K04M3_24280 d0e986d88865a77f641ef7632d6c3a26 641 Pfam PF16124 RecQ zinc-binding 512 559 3.5E-8 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain K04M3_08300 6908bdbef8756e929b10d44329fd8a6a 177 Pfam PF00258 Flavodoxin 6 162 1.2E-32 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 K04M3_08300 6908bdbef8756e929b10d44329fd8a6a 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 6.5E-71 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 K04M3_08300 6908bdbef8756e929b10d44329fd8a6a 177 SUPERFAMILY SSF52218 4 172 1.1E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_08300 6908bdbef8756e929b10d44329fd8a6a 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 K04M3_08300 6908bdbef8756e929b10d44329fd8a6a 177 PIRSF PIRSF038996 1 174 2.5E-66 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 K04M3_08300 6908bdbef8756e929b10d44329fd8a6a 177 Gene3D G3DSA:3.40.50.360 3 176 4.6E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 SUPERFAMILY SSF51604 123 315 3.01E-52 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 SMART SM00922 137 230 5.2E-16 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 Gene3D G3DSA:3.30.390.10 1 110 6.6E-26 T 12-10-2018 IPR029017 Enolase-like, N-terminal K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 SUPERFAMILY SSF54826 2 110 1.96E-21 T 12-10-2018 K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 Gene3D G3DSA:3.20.20.120 122 328 6.0E-56 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 Pfam PF13378 Enolase C-terminal domain-like 140 301 2.6E-27 T 12-10-2018 IPR029065 Enolase C-terminal domain-like K04M3_46640 d34ec13eb7aa52ba1a41e94ed3e7a21f 330 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 108 2.3E-9 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain K04M3_24760 64bfdb2115a436b3cbe84032dc70a39d 450 SUPERFAMILY SSF103473 11 436 1.57E-32 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_24760 64bfdb2115a436b3cbe84032dc70a39d 450 Pfam PF07690 Major Facilitator Superfamily 24 397 2.0E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_24760 64bfdb2115a436b3cbe84032dc70a39d 450 Gene3D G3DSA:1.20.1250.20 248 441 3.2E-8 T 12-10-2018 K04M3_24760 64bfdb2115a436b3cbe84032dc70a39d 450 Gene3D G3DSA:1.20.1250.20 11 222 9.8E-12 T 12-10-2018 K04M3_46200 7887909d68114308d3d643b4b8ce5f67 335 SUPERFAMILY SSF53187 4 328 9.26E-56 T 12-10-2018 K04M3_46200 7887909d68114308d3d643b4b8ce5f67 335 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 48 328 3.8E-66 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_46200 7887909d68114308d3d643b4b8ce5f67 335 PIRSF PIRSF039012 1 333 7.1E-79 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_46200 7887909d68114308d3d643b4b8ce5f67 335 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 2 328 1.5E-143 T 12-10-2018 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB KEGG: 00260+3.5.1.125|MetaCyc: PWY-7855 K04M3_46200 7887909d68114308d3d643b4b8ce5f67 335 Gene3D G3DSA:3.40.630.10 1 330 1.7E-105 T 12-10-2018 K04M3_18510 969d85d7412ee718d1f35796ec2130a2 318 Gene3D G3DSA:1.20.58.340 242 318 4.4E-27 T 12-10-2018 K04M3_18510 969d85d7412ee718d1f35796ec2130a2 318 SUPERFAMILY SSF144083 253 316 1.1E-20 T 12-10-2018 K04M3_18510 969d85d7412ee718d1f35796ec2130a2 318 SUPERFAMILY SSF143865 20 257 4.45E-34 T 12-10-2018 K04M3_18510 969d85d7412ee718d1f35796ec2130a2 318 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 27 318 7.3E-75 T 12-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 K04M3_18510 969d85d7412ee718d1f35796ec2130a2 318 Pfam PF01544 CorA-like Mg2+ transporter protein 29 314 1.8E-56 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 K04M3_10420 7994ec8623c6d5b1e4662aee8677c23d 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 2.1E-30 T 12-10-2018 IPR011846 Cyd operon protein YbgE K04M3_10420 7994ec8623c6d5b1e4662aee8677c23d 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 8.8E-40 T 12-10-2018 IPR011846 Cyd operon protein YbgE K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 1.7E-159 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 Gene3D G3DSA:1.10.150.530 1 67 2.2E-25 T 12-10-2018 K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 Pfam PF04055 Radical SAM superfamily 109 283 1.3E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 SUPERFAMILY SSF102114 103 312 2.49E-13 T 12-10-2018 K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 PIRSF PIRSF006004 3 366 2.4E-143 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 Gene3D G3DSA:3.20.20.70 68 338 6.7E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_05800 e10c5cec8857dc0027bc0cfc37ff3e82 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.739 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 SMART SM00116 147 195 0.028 T 12-10-2018 IPR000644 CBS domain K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 SMART SM00116 84 133 0.0058 T 12-10-2018 IPR000644 CBS domain K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF00571 CBS domain 75 132 2.5E-7 T 12-10-2018 IPR000644 CBS domain K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 12-10-2018 IPR000644 CBS domain K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 Gene3D G3DSA:3.30.465.10 204 296 2.9E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 SMART SM01091 211 289 2.4E-30 T 12-10-2018 IPR005170 Transporter-associated domain K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 SUPERFAMILY SSF54631 65 206 2.02E-33 T 12-10-2018 K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF03471 Transporter associated domain 212 287 3.3E-22 T 12-10-2018 IPR005170 Transporter-associated domain K04M3_07060 2f6a6af0a1373d69673dff17832626ee 299 Gene3D G3DSA:3.10.580.10 57 203 3.8E-54 T 12-10-2018 K04M3_30910 746e269ffbfa8e4ad2caa2e11ed1f629 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 5.2E-76 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_30910 746e269ffbfa8e4ad2caa2e11ed1f629 449 Pfam PF01554 MatE 24 184 1.6E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_30910 746e269ffbfa8e4ad2caa2e11ed1f629 449 Pfam PF01554 MatE 250 399 2.9E-15 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_30910 746e269ffbfa8e4ad2caa2e11ed1f629 449 PIRSF PIRSF006603 7 448 2.7E-49 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_48520 a001f8e97d46ca78ea02228dddadf102 285 Gene3D G3DSA:3.40.1190.20 2 284 2.8E-102 T 12-10-2018 IPR029056 Ribokinase-like K04M3_48520 a001f8e97d46ca78ea02228dddadf102 285 SUPERFAMILY SSF53613 17 278 1.33E-82 T 12-10-2018 IPR029056 Ribokinase-like K04M3_48520 a001f8e97d46ca78ea02228dddadf102 285 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 20 277 3.4E-102 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48520 a001f8e97d46ca78ea02228dddadf102 285 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 5.3E-95 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 K04M3_47490 984cc518af21ea8d2fddfbd76027ac53 95 Gene3D G3DSA:3.40.50.2300 1 90 1.7E-20 T 12-10-2018 K04M3_47490 984cc518af21ea8d2fddfbd76027ac53 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 2.3E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 K04M3_47490 984cc518af21ea8d2fddfbd76027ac53 95 SUPERFAMILY SSF52794 1 90 1.99E-21 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 K04M3_19490 9de53530909a25a01b85512f547f0639 453 Gene3D G3DSA:3.30.1330.90 10 159 3.5E-49 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 K04M3_19490 9de53530909a25a01b85512f547f0639 453 Pfam PF03315 Serine dehydratase beta chain 3 155 4.2E-54 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 K04M3_19490 9de53530909a25a01b85512f547f0639 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.2E-226 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 K04M3_19490 9de53530909a25a01b85512f547f0639 453 SUPERFAMILY SSF143548 16 157 4.18E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 K04M3_19490 9de53530909a25a01b85512f547f0639 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 5.6E-97 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit K04M3_20470 095bd9cac5cef3e1ef6dacc15e61cfdb 298 PIRSF PIRSF006278 2 296 5.9E-24 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase K04M3_20470 095bd9cac5cef3e1ef6dacc15e61cfdb 298 Gene3D G3DSA:3.40.50.1100 15 285 1.1E-23 T 12-10-2018 K04M3_20470 095bd9cac5cef3e1ef6dacc15e61cfdb 298 Gene3D G3DSA:3.40.50.1100 33 137 1.1E-23 T 12-10-2018 K04M3_20470 095bd9cac5cef3e1ef6dacc15e61cfdb 298 SUPERFAMILY SSF53686 9 295 2.44E-56 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_44340 0df76b3c060eeae6db485684acde1517 166 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 149 1.7E-33 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN K04M3_44340 0df76b3c060eeae6db485684acde1517 166 Gene3D G3DSA:2.60.40.4150 28 164 5.6E-31 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily K04M3_44340 0df76b3c060eeae6db485684acde1517 166 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 152 2.6E-40 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 SUPERFAMILY SSF52833 3 241 1.2E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 Gene3D G3DSA:3.40.30.10 4 165 6.2E-64 T 12-10-2018 K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 Gene3D G3DSA:3.40.30.10 171 242 5.3E-23 T 12-10-2018 K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 Pfam PF08534 Redoxin 5 160 1.7E-33 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 Pfam PF00462 Glutaredoxin 173 231 1.8E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.6E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 3.2E-42 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 K04M3_28920 803a7f8249db3ce0e806e3d464120881 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 K04M3_35190 ed76f3e1c421846d075be76f20a98403 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 1.5E-36 T 12-10-2018 IPR007553 Domain of unknown function DUF523 K04M3_35190 ed76f3e1c421846d075be76f20a98403 316 PIRSF PIRSF037004 1 316 2.6E-138 T 12-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 K04M3_35190 ed76f3e1c421846d075be76f20a98403 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.2E-43 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 K04M3_15530 e9546868ea0db9d1540dbe1991681511 288 Gene3D G3DSA:3.30.1330.60 144 276 2.1E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_15530 e9546868ea0db9d1540dbe1991681511 288 PRINTS PR01021 OMPA domain signature 212 228 3.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_15530 e9546868ea0db9d1540dbe1991681511 288 PRINTS PR01021 OMPA domain signature 197 212 3.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_15530 e9546868ea0db9d1540dbe1991681511 288 PRINTS PR01021 OMPA domain signature 167 189 3.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_15530 e9546868ea0db9d1540dbe1991681511 288 SUPERFAMILY SSF103088 155 267 7.06E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_15530 e9546868ea0db9d1540dbe1991681511 288 Pfam PF00691 OmpA family 167 261 3.0E-21 T 12-10-2018 IPR006665 OmpA-like domain K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 Gene3D G3DSA:3.40.50.720 1 267 1.0E-49 T 12-10-2018 K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 Pfam PF00106 short chain dehydrogenase 3 190 6.4E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 6.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_46010 8021ad3733dc2dfde5a62d6dc9735dbe 267 SUPERFAMILY SSF51735 2 241 6.71E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_35450 a52565345adbd211c567547db5e751b9 214 SUPERFAMILY SSF46894 139 212 3.37E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 SMART SM00421 153 210 4.8E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 5.5E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 4.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 4.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 4.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_35450 a52565345adbd211c567547db5e751b9 214 Gene3D G3DSA:1.10.10.10 148 214 1.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_35450 a52565345adbd211c567547db5e751b9 214 Gene3D G3DSA:3.40.50.2300 7 143 2.8E-27 T 12-10-2018 K04M3_40900 eafcd88c90ba1cdefac0e040b0911a72 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.4E-74 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 K04M3_41410 eafcd88c90ba1cdefac0e040b0911a72 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.4E-74 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 SUPERFAMILY SSF46609 1 90 3.4E-30 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 Gene3D G3DSA:1.10.287.990 20 83 1.4E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 PIRSF PIRSF000349 1 202 3.0E-81 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 3.8E-40 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.0E-27 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 SUPERFAMILY SSF54719 87 200 1.02E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_30020 a456c7b9b3740f1be2b651335e097632 202 Gene3D G3DSA:2.40.500.20 84 201 3.4E-48 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 Pfam PF03462 PCRF domain 3 143 6.8E-49 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 Gene3D G3DSA:1.20.58.410 1 40 8.0E-8 T 12-10-2018 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 Pfam PF00472 RF-1 domain 153 261 1.3E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 287 1.0E-148 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 Gene3D G3DSA:3.30.160.20 150 245 8.5E-97 T 12-10-2018 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 169 185 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 Gene3D G3DSA:3.30.70.1660 54 282 8.5E-97 T 12-10-2018 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 289 31.857 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 SUPERFAMILY SSF75620 2 288 5.89E-125 T 12-10-2018 K04M3_04810 ca606cd14a8fd2f913678e631058b515 289 SMART SM00937 9 119 1.3E-57 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 K04M3_09610 5f380bd40f07046908e3b60c4951e66a 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.1E-55 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB K04M3_09610 5f380bd40f07046908e3b60c4951e66a 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 7.5E-75 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB K04M3_09610 5f380bd40f07046908e3b60c4951e66a 196 Gene3D G3DSA:3.40.50.10610 39 188 2.9E-43 T 12-10-2018 K04M3_22610 437f30f37f300225406143a604412f2b 205 Pfam PF00005 ABC transporter 18 158 1.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_22610 437f30f37f300225406143a604412f2b 205 SMART SM00382 26 205 4.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_22610 437f30f37f300225406143a604412f2b 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 4.1E-77 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 K04M3_22610 437f30f37f300225406143a604412f2b 205 SUPERFAMILY SSF52540 2 193 3.59E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_22610 437f30f37f300225406143a604412f2b 205 Gene3D G3DSA:3.40.50.300 1 201 6.7E-41 T 12-10-2018 K04M3_22610 437f30f37f300225406143a604412f2b 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 SUPERFAMILY SSF53850 36 530 9.51E-141 T 12-10-2018 K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 Gene3D G3DSA:3.40.190.10 41 523 1.6E-183 T 12-10-2018 K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 1.4E-85 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 Gene3D G3DSA:3.10.105.10 296 511 1.6E-183 T 12-10-2018 K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 Gene3D G3DSA:3.90.76.10 71 194 1.6E-183 T 12-10-2018 K04M3_32550 9728128d900d599e51845bb9e3e57a30 541 PIRSF PIRSF002741 1 541 7.4E-115 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 16 339 3.8E-60 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 611 656 9.0E-10 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 PRINTS PR01005 Flagellar hook-associated protein signature 23 46 2.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 PRINTS PR01005 Flagellar hook-associated protein signature 61 83 2.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 PRINTS PR01005 Flagellar hook-associated protein signature 371 393 2.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 PRINTS PR01005 Flagellar hook-associated protein signature 169 193 2.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 K04M3_07770 fea3d1c9f0bc39a987cfa5a6fff8adc8 657 SUPERFAMILY SSF64518 186 656 3.92E-26 T 12-10-2018 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 Gene3D G3DSA:3.40.50.720 1 113 1.3E-34 T 12-10-2018 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.4E-7 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 Pfam PF13241 Putative NAD(P)-binding 6 116 2.1E-31 T 12-10-2018 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 SUPERFAMILY SSF51735 1 113 1.75E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 SUPERFAMILY SSF75615 115 202 2.49E-26 T 12-10-2018 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 Gene3D G3DSA:3.30.160.110 114 149 1.8E-14 T 12-10-2018 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 2.2E-13 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 Gene3D G3DSA:1.10.8.210 150 211 8.6E-11 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_16480 94de803d1522f9ec1870b75945a42df6 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 203 9.1E-63 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_35570 5186e64834a36701483d6f7ed74e6ae4 217 Pfam PF02254 TrkA-N domain 5 119 1.2E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_35570 5186e64834a36701483d6f7ed74e6ae4 217 SUPERFAMILY SSF51735 3 133 9.63E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_35570 5186e64834a36701483d6f7ed74e6ae4 217 Gene3D G3DSA:3.40.50.720 1 137 2.6E-32 T 12-10-2018 K04M3_35570 5186e64834a36701483d6f7ed74e6ae4 217 SUPERFAMILY SSF116726 134 213 4.32E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_35570 5186e64834a36701483d6f7ed74e6ae4 217 Gene3D G3DSA:3.30.70.1450 138 213 4.2E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_00080 350f7a7e0e7be7859142a63abd6f6c32 417 Pfam PF00155 Aminotransferase class I and II 67 401 1.2E-27 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_00080 350f7a7e0e7be7859142a63abd6f6c32 417 Gene3D G3DSA:3.40.640.10 1 415 1.1E-148 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_00080 350f7a7e0e7be7859142a63abd6f6c32 417 SUPERFAMILY SSF53383 13 411 1.77E-61 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 SUPERFAMILY SSF53850 98 300 7.24E-19 T 12-10-2018 K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 Pfam PF03466 LysR substrate binding domain 98 299 1.6E-19 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 Gene3D G3DSA:3.40.190.10 173 275 4.6E-33 T 12-10-2018 K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 2.1E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 Gene3D G3DSA:1.10.10.10 5 94 3.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 SUPERFAMILY SSF46785 10 92 1.28E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_00570 77eedf2823b4c88e69884cd09a7b3577 301 Gene3D G3DSA:3.40.190.10 101 294 4.6E-33 T 12-10-2018 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 SUPERFAMILY SSF50715 340 548 5.18E-80 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.261 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.1E-126 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Gene3D G3DSA:3.40.50.620 30 247 7.3E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.8E-63 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Gene3D G3DSA:2.40.240.10 464 548 4.7E-34 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Gene3D G3DSA:3.90.800.10 101 209 7.3E-106 T 12-10-2018 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Gene3D G3DSA:1.10.1160.10 261 339 8.4E-37 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 8.8E-299 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 Gene3D G3DSA:2.40.240.10 348 463 8.2E-47 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_08270 e8fc8b36ae2da33f8a1225b71225e6f1 556 SUPERFAMILY SSF52374 11 337 2.28E-102 T 12-10-2018 K04M3_25690 986e292d3184825d89487b06fc379933 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 3.1E-12 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.8E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF55957 359 444 7.33E-21 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 4.1E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 4.1E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 4.1E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.30.310.50 371 446 3.1E-24 T 12-10-2018 K04M3_25690 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.40.120.10 176 363 5.8E-60 T 12-10-2018 K04M3_25690 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF53738 259 365 8.24E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.8E-202 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF53738 157 257 1.1E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.40.120.10 4 155 8.0E-49 T 12-10-2018 K04M3_25690 986e292d3184825d89487b06fc379933 446 Gene3D G3DSA:3.40.120.10 258 340 5.8E-60 T 12-10-2018 K04M3_25690 986e292d3184825d89487b06fc379933 446 SUPERFAMILY SSF53738 4 182 8.24E-49 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.3E-46 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.6E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_25690 986e292d3184825d89487b06fc379933 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.82 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 K04M3_28110 3c688df97c92beab967ce3bbc69faaa0 250 Gene3D G3DSA:3.30.2350.10 4 223 6.1E-67 T 12-10-2018 K04M3_28110 3c688df97c92beab967ce3bbc69faaa0 250 Pfam PF00849 RNA pseudouridylate synthase 23 172 2.9E-29 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_28110 3c688df97c92beab967ce3bbc69faaa0 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_28110 3c688df97c92beab967ce3bbc69faaa0 250 SUPERFAMILY SSF55120 7 220 7.84E-60 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 336.822 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 30 868 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF55021 797 860 1.2E-10 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF55021 689 761 2.18E-8 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF81301 43 171 2.62E-19 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 9.7E-36 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF109604 418 596 8.16E-14 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF01842 ACT domain 802 846 1.3E-7 T 12-10-2018 IPR002912 ACT domain K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF01909 Nucleotidyltransferase domain 57 111 9.7E-8 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:1.10.3210.10 435 588 1.1E-8 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 SUPERFAMILY SSF81593 187 310 2.2E-9 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 SMART SM00471 447 594 4.9E-10 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Pfam PF01966 HD domain 452 584 1.7E-13 T 12-10-2018 IPR006674 HD domain K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 Gene3D G3DSA:3.30.70.260 796 873 1.4E-5 T 12-10-2018 K04M3_24020 40b08079982f4b788f37a21ac3837c5d 874 PIRSF PIRSF006288 7 874 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 K04M3_36260 12dda5804c00428dc2b3ecf6d854cb02 282 SMART SM00382 49 238 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_36260 12dda5804c00428dc2b3ecf6d854cb02 282 Gene3D G3DSA:3.40.50.300 17 281 3.0E-75 T 12-10-2018 K04M3_36260 12dda5804c00428dc2b3ecf6d854cb02 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_36260 12dda5804c00428dc2b3ecf6d854cb02 282 SUPERFAMILY SSF52540 35 262 1.43E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36260 12dda5804c00428dc2b3ecf6d854cb02 282 Pfam PF00005 ABC transporter 51 190 6.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_39390 38bec2eb7842a911c8fec572f80c7643 117 SUPERFAMILY SSF55846 36 115 1.15E-9 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_39390 38bec2eb7842a911c8fec572f80c7643 117 Gene3D G3DSA:3.40.80.10 5 116 4.5E-11 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_39390 38bec2eb7842a911c8fec572f80c7643 117 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 39 108 2.0E-6 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 5.7E-98 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.8E-39 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 SUPERFAMILY SSF51735 1 268 1.81E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 SUPERFAMILY SSF55347 127 236 1.31E-37 T 12-10-2018 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 PIRSF PIRSF000161 1 268 1.2E-88 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 9.3E-44 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.525 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 Gene3D G3DSA:3.30.360.10 127 234 9.1E-101 T 12-10-2018 K04M3_04390 af4bce86b0e9296202b4af8f3bc5961f 269 Gene3D G3DSA:3.40.50.720 3 264 9.1E-101 T 12-10-2018 K04M3_35720 7e180f84c5f6ffbb387271fd93deb1e7 112 Gene3D G3DSA:2.60.120.10 1 112 7.1E-48 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_35720 7e180f84c5f6ffbb387271fd93deb1e7 112 PIRSF PIRSF020632 3 112 8.7E-63 T 12-10-2018 IPR014510 Tellurite resistance predicted, YeaR K04M3_35720 7e180f84c5f6ffbb387271fd93deb1e7 112 SUPERFAMILY SSF51197 4 101 1.65E-32 T 12-10-2018 K04M3_35720 7e180f84c5f6ffbb387271fd93deb1e7 112 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 3.5E-26 T 12-10-2018 IPR015392 Domain of unknown function DUF1971 K04M3_45580 b15cdbb4dfbae8764af1855b76611402 425 Pfam PF07969 Amidohydrolase family 43 403 4.9E-55 T 12-10-2018 IPR013108 Amidohydrolase 3 K04M3_45580 b15cdbb4dfbae8764af1855b76611402 425 Gene3D G3DSA:3.20.20.140 55 362 4.3E-177 T 12-10-2018 K04M3_45580 b15cdbb4dfbae8764af1855b76611402 425 Gene3D G3DSA:2.30.40.10 8 409 4.3E-177 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_45580 b15cdbb4dfbae8764af1855b76611402 425 SUPERFAMILY SSF51556 54 372 1.73E-105 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_45580 b15cdbb4dfbae8764af1855b76611402 425 SUPERFAMILY SSF51338 1 76 2.64E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 Pfam PF03466 LysR substrate binding domain 87 282 1.9E-25 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 SUPERFAMILY SSF53850 88 292 1.09E-28 T 12-10-2018 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 SUPERFAMILY SSF46785 1 87 6.74E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 Gene3D G3DSA:3.40.190.290 91 292 7.2E-31 T 12-10-2018 K04M3_40270 78d60b41bf82f083f987a13051a44cd3 294 Gene3D G3DSA:1.10.10.10 1 84 3.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_18100 b31a6df4e9547beade8a9176c2b157c0 102 Pfam PF01527 Transposase 5 80 6.0E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 K04M3_18100 b31a6df4e9547beade8a9176c2b157c0 102 SUPERFAMILY SSF46689 7 99 1.68E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_18100 b31a6df4e9547beade8a9176c2b157c0 102 Gene3D G3DSA:1.10.10.60 10 93 1.1E-12 T 12-10-2018 K04M3_18270 b31a6df4e9547beade8a9176c2b157c0 102 Pfam PF01527 Transposase 5 80 6.0E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 K04M3_18270 b31a6df4e9547beade8a9176c2b157c0 102 SUPERFAMILY SSF46689 7 99 1.68E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_18270 b31a6df4e9547beade8a9176c2b157c0 102 Gene3D G3DSA:1.10.10.60 10 93 1.1E-12 T 12-10-2018 K04M3_16570 d68be37d29b4c33ceec15220fb3c5638 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 K04M3_16570 d68be37d29b4c33ceec15220fb3c5638 90 Gene3D G3DSA:3.30.70.100 1 90 4.4E-29 T 12-10-2018 K04M3_16570 d68be37d29b4c33ceec15220fb3c5638 90 SUPERFAMILY SSF54975 4 89 3.49E-26 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 K04M3_16570 d68be37d29b4c33ceec15220fb3c5638 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 K04M3_16570 d68be37d29b4c33ceec15220fb3c5638 90 Pfam PF00708 Acylphosphatase 7 89 1.0E-22 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 K04M3_49080 662920a312946462beb64a0f35b67ba9 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 4.3E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_49080 662920a312946462beb64a0f35b67ba9 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_49080 662920a312946462beb64a0f35b67ba9 559 SUPERFAMILY SSF55120 350 556 1.42E-57 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_49080 662920a312946462beb64a0f35b67ba9 559 Gene3D G3DSA:3.30.2350.10 347 559 1.7E-61 T 12-10-2018 K04M3_21630 23f4e9cf6ccd6aa8bdea0e55041b50d7 210 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.439 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 K04M3_21630 23f4e9cf6ccd6aa8bdea0e55041b50d7 210 SMART SM00900 100 192 4.8E-32 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 K04M3_21630 23f4e9cf6ccd6aa8bdea0e55041b50d7 210 Pfam PF04205 FMN-binding domain 100 188 1.4E-18 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 K04M3_21630 23f4e9cf6ccd6aa8bdea0e55041b50d7 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 4.9E-64 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 K04M3_21630 23f4e9cf6ccd6aa8bdea0e55041b50d7 210 PIRSF PIRSF006091 1 205 1.6E-77 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 K04M3_32560 3cc09eb7e26de26fabef59ccc3ec30fc 194 SUPERFAMILY SSF52218 2 191 1.1E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_32560 3cc09eb7e26de26fabef59ccc3ec30fc 194 Gene3D G3DSA:3.40.50.360 1 193 1.4E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_32560 3cc09eb7e26de26fabef59ccc3ec30fc 194 Pfam PF03358 NADPH-dependent FMN reductase 57 137 3.0E-13 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 K04M3_30980 06dfdda08bfd858744f6e0a1a6c22e37 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 7.6E-118 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 K04M3_30980 06dfdda08bfd858744f6e0a1a6c22e37 280 Pfam PF01694 Rhomboid family 134 271 6.5E-31 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 K04M3_30980 06dfdda08bfd858744f6e0a1a6c22e37 280 SUPERFAMILY SSF144091 96 271 1.7E-40 T 12-10-2018 K04M3_30980 06dfdda08bfd858744f6e0a1a6c22e37 280 Gene3D G3DSA:1.20.1540.10 90 279 4.4E-54 T 12-10-2018 IPR035952 Rhomboid-like superfamily K04M3_30980 06dfdda08bfd858744f6e0a1a6c22e37 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 6.4E-34 T 12-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 K04M3_30980 06dfdda08bfd858744f6e0a1a6c22e37 280 Gene3D G3DSA:3.30.70.2350 1 70 2.9E-25 T 12-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily K04M3_31720 ed49550e6133942704456acf537f0e4b 646 Pfam PF01964 Radical SAM ThiC family 144 592 7.7E-199 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 K04M3_31720 ed49550e6133942704456acf537f0e4b 646 Gene3D G3DSA:3.20.20.540 214 527 2.5E-153 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 K04M3_31720 ed49550e6133942704456acf537f0e4b 646 Pfam PF13667 ThiC-associated domain 22 104 1.4E-33 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 K04M3_31720 ed49550e6133942704456acf537f0e4b 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.42 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 K04M3_31720 ed49550e6133942704456acf537f0e4b 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 1.1E-218 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 SUPERFAMILY SSF53474 3 268 1.32E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 Pfam PF00561 alpha/beta hydrolase fold 23 136 1.2E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 Gene3D G3DSA:3.40.50.1820 1 271 2.2E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 3.6E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 3.6E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 3.6E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_03800 0b3aada66ae6a64c6d4bf6c1ec960fa5 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 2.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_14650 e7518ab86ea07efa0614e65a354f44d7 248 Pfam PF00929 Exonuclease 59 229 1.5E-16 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_14650 e7518ab86ea07efa0614e65a354f44d7 248 Gene3D G3DSA:3.30.420.10 52 240 8.4E-35 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_14650 e7518ab86ea07efa0614e65a354f44d7 248 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 53 239 2.3E-21 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_14650 e7518ab86ea07efa0614e65a354f44d7 248 SUPERFAMILY SSF53098 57 238 1.37E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_14650 e7518ab86ea07efa0614e65a354f44d7 248 SMART SM00479 57 238 1.8E-25 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Gene3D G3DSA:3.30.56.10 401 475 8.8E-26 T 12-10-2018 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 47.166 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Gene3D G3DSA:3.30.56.10 7 179 1.0E-70 T 12-10-2018 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Gene3D G3DSA:2.40.50.140 39 154 1.0E-70 T 12-10-2018 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SUPERFAMILY SSF54991 703 800 2.88E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Gene3D G3DSA:3.30.930.10 486 697 2.4E-60 T 12-10-2018 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Pfam PF03483 B3/4 domain 212 385 9.3E-72 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SUPERFAMILY SSF55681 467 695 4.37E-49 T 12-10-2018 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 9.6E-277 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Gene3D G3DSA:3.50.40.10 197 395 6.0E-84 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SUPERFAMILY SSF50249 38 189 3.43E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SUPERFAMILY SSF56037 196 394 4.45E-78 T 12-10-2018 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 6.7E-29 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SMART SM00874 403 471 4.8E-29 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Pfam PF01588 Putative tRNA binding domain 45 145 3.4E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.2E-17 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SMART SM00873 212 385 6.1E-101 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 SMART SM00896 707 800 2.6E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 K04M3_12480 f5f7c558c74c4a047244aa9e57bd4f40 801 Gene3D G3DSA:3.30.70.380 708 801 1.2E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 K04M3_00530 a6b58bd449e9db6f132cfdb37ca9dcb9 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 162 2.3E-63 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 K04M3_00530 a6b58bd449e9db6f132cfdb37ca9dcb9 174 Gene3D G3DSA:3.40.50.300 2 168 4.3E-63 T 12-10-2018 K04M3_00530 a6b58bd449e9db6f132cfdb37ca9dcb9 174 Pfam PF01202 Shikimate kinase 13 136 9.3E-14 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 K04M3_00530 a6b58bd449e9db6f132cfdb37ca9dcb9 174 SUPERFAMILY SSF52540 4 152 5.15E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:3.30.70.1430 40 794 8.7E-288 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:3.30.70.1440 648 843 8.7E-288 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 5.5E-277 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:3.30.2090.10 698 786 8.7E-288 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:3.30.70.1320 134 325 8.7E-288 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82693 553 650 1.78E-22 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82693 136 323 5.36E-22 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:1.20.1640.10 10 500 8.7E-288 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82866 290 489 6.02E-47 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:3.30.2090.10 178 268 8.7E-288 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82693 41 130 2.79E-23 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:3.30.70.1430 555 647 8.7E-288 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 SUPERFAMILY SSF82866 782 1008 4.05E-47 T 12-10-2018 K04M3_00320 01f77d9fb344ebe9c4e58cd0f088b934 1040 Gene3D G3DSA:1.20.1640.10 501 1001 8.7E-288 T 12-10-2018 K04M3_47210 28e4cada753d308a359ffd38c6300e99 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.4E-14 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 K04M3_47210 28e4cada753d308a359ffd38c6300e99 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 86 4.5E-6 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal K04M3_47210 28e4cada753d308a359ffd38c6300e99 93 SUPERFAMILY SSF101498 12 89 1.05E-8 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily K04M3_46840 8a3eb9acaff0c745ced6b6b432acbbf4 217 Pfam PF00857 Isochorismatase family 10 208 3.2E-31 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 K04M3_46840 8a3eb9acaff0c745ced6b6b432acbbf4 217 Gene3D G3DSA:3.40.50.850 7 212 7.3E-35 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_46840 8a3eb9acaff0c745ced6b6b432acbbf4 217 SUPERFAMILY SSF52499 4 212 4.06E-26 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_27380 16b512687f99b264cea1e9ad400d9ea2 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 K04M3_27380 16b512687f99b264cea1e9ad400d9ea2 90 SUPERFAMILY SSF111148 1 89 1.7E-40 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 K04M3_27380 16b512687f99b264cea1e9ad400d9ea2 90 PIRSF PIRSF029827 1 90 1.5E-43 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 K04M3_27380 16b512687f99b264cea1e9ad400d9ea2 90 Gene3D G3DSA:1.10.3880.10 1 90 4.1E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 K04M3_27380 16b512687f99b264cea1e9ad400d9ea2 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.6E-42 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 K04M3_27380 16b512687f99b264cea1e9ad400d9ea2 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.339 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 K04M3_22550 c95685021fa75f500407c14ed0082b25 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 1.5E-71 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 K04M3_22550 c95685021fa75f500407c14ed0082b25 184 Gene3D G3DSA:3.40.30.10 20 184 2.2E-45 T 12-10-2018 K04M3_22550 c95685021fa75f500407c14ed0082b25 184 SUPERFAMILY SSF52833 46 178 6.43E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_22550 c95685021fa75f500407c14ed0082b25 184 Pfam PF08534 Redoxin 41 164 3.3E-27 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 K04M3_22550 c95685021fa75f500407c14ed0082b25 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_41090 8985079ce50f403dc742fe8355c833c1 380 Pfam PF05707 Zonular occludens toxin (Zot) 1 193 1.9E-33 T 12-10-2018 IPR008900 Zona occludens toxin K04M3_41090 8985079ce50f403dc742fe8355c833c1 380 SUPERFAMILY SSF52540 4 141 9.31E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_41090 8985079ce50f403dc742fe8355c833c1 380 Gene3D G3DSA:3.40.50.300 1 194 3.2E-43 T 12-10-2018 K04M3_40960 8985079ce50f403dc742fe8355c833c1 380 Pfam PF05707 Zonular occludens toxin (Zot) 1 193 1.9E-33 T 12-10-2018 IPR008900 Zona occludens toxin K04M3_40960 8985079ce50f403dc742fe8355c833c1 380 SUPERFAMILY SSF52540 4 141 9.31E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_40960 8985079ce50f403dc742fe8355c833c1 380 Gene3D G3DSA:3.40.50.300 1 194 3.2E-43 T 12-10-2018 K04M3_41470 8985079ce50f403dc742fe8355c833c1 380 Pfam PF05707 Zonular occludens toxin (Zot) 1 193 1.9E-33 T 12-10-2018 IPR008900 Zona occludens toxin K04M3_41470 8985079ce50f403dc742fe8355c833c1 380 SUPERFAMILY SSF52540 4 141 9.31E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_41470 8985079ce50f403dc742fe8355c833c1 380 Gene3D G3DSA:3.40.50.300 1 194 3.2E-43 T 12-10-2018 K04M3_36750 88957a5151ad0264394829aadd4900dc 481 Gene3D G3DSA:3.30.1490.130 284 340 1.7E-170 T 12-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 K04M3_36750 88957a5151ad0264394829aadd4900dc 481 SUPERFAMILY SSF51556 57 415 1.38E-85 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_36750 88957a5151ad0264394829aadd4900dc 481 SUPERFAMILY SSF51338 3 469 2.05E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_36750 88957a5151ad0264394829aadd4900dc 481 Pfam PF07969 Amidohydrolase family 45 459 2.9E-43 T 12-10-2018 IPR013108 Amidohydrolase 3 K04M3_36750 88957a5151ad0264394829aadd4900dc 481 Gene3D G3DSA:3.20.20.140 56 415 1.7E-170 T 12-10-2018 K04M3_36750 88957a5151ad0264394829aadd4900dc 481 Gene3D G3DSA:2.30.40.10 3 428 1.7E-170 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_02990 8c509bca05da6a3990eab109af343901 476 Gene3D G3DSA:2.40.30.10 242 327 2.1E-26 T 12-10-2018 K04M3_02990 8c509bca05da6a3990eab109af343901 476 Gene3D G3DSA:2.40.30.10 331 434 1.0E-29 T 12-10-2018 K04M3_02990 8c509bca05da6a3990eab109af343901 476 SUPERFAMILY SSF50447 243 324 2.43E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_02990 8c509bca05da6a3990eab109af343901 476 Gene3D G3DSA:3.40.50.300 6 239 3.0E-71 T 12-10-2018 K04M3_02990 8c509bca05da6a3990eab109af343901 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 1.7E-44 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_02990 8c509bca05da6a3990eab109af343901 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 9.1E-198 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 K04M3_02990 8c509bca05da6a3990eab109af343901 476 SUPERFAMILY SSF50465 332 434 3.45E-30 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal K04M3_02990 8c509bca05da6a3990eab109af343901 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.81 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 K04M3_02990 8c509bca05da6a3990eab109af343901 476 SUPERFAMILY SSF52540 19 235 3.89E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_02990 8c509bca05da6a3990eab109af343901 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_02990 8c509bca05da6a3990eab109af343901 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_02990 8c509bca05da6a3990eab109af343901 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_02990 8c509bca05da6a3990eab109af343901 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_02990 8c509bca05da6a3990eab109af343901 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 K04M3_02990 8c509bca05da6a3990eab109af343901 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site K04M3_02990 8c509bca05da6a3990eab109af343901 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.2E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 SMART SM00893 3 186 7.8E-34 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 Pfam PF01012 Electron transfer flavoprotein domain 4 161 1.0E-35 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 PIRSF PIRSF000089 1 308 4.9E-109 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 Gene3D G3DSA:3.40.50.1220 183 308 2.0E-58 T 12-10-2018 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 SUPERFAMILY SSF52402 4 182 6.21E-48 T 12-10-2018 K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 Gene3D G3DSA:3.40.50.620 4 181 5.4E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 SUPERFAMILY SSF52467 186 308 3.97E-49 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_44100 cf4cc63097521c3cd76ba59449613d19 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 8.1E-37 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 SUPERFAMILY SSF56024 280 457 6.87E-36 T 12-10-2018 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 Gene3D G3DSA:3.30.870.10 286 465 3.2E-40 T 12-10-2018 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 SUPERFAMILY SSF56024 60 237 4.19E-39 T 12-10-2018 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 Pfam PF13091 PLD-like domain 78 224 2.1E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 Pfam PF13091 PLD-like domain 310 448 4.5E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 Gene3D G3DSA:3.30.870.10 56 256 8.6E-37 T 12-10-2018 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 SMART SM00155 399 426 4.2E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 K04M3_46550 fed226cddc0c580886db7848b665f4dc 505 SMART SM00155 165 192 0.027 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 SUPERFAMILY SSF46689 135 185 3.14E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 SMART SM00342 152 235 5.5E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 Gene3D G3DSA:2.60.120.10 8 71 1.4E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 Pfam PF12833 Helix-turn-helix domain 158 235 1.0E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 204 219 5.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 219 235 5.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 SUPERFAMILY SSF51182 14 105 5.76E-9 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 Gene3D G3DSA:1.10.10.60 133 236 1.3E-29 T 12-10-2018 K04M3_17360 1023d784117ce638ece6a00daf9d746b 236 SUPERFAMILY SSF46689 189 235 3.05E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 SUPERFAMILY SSF55136 161 304 1.15E-16 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 Gene3D G3DSA:3.20.80.10 155 307 1.8E-24 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 Pfam PF06445 GyrI-like small molecule binding domain 161 306 6.6E-17 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 SUPERFAMILY SSF55961 5 146 1.44E-14 T 12-10-2018 K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 SMART SM00871 156 309 2.4E-8 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 Gene3D G3DSA:3.30.530.20 3 154 7.7E-16 T 12-10-2018 IPR023393 START-like domain superfamily K04M3_38710 faf142d95a142a1868ec8ff54bbbee1b 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 147 3.4E-19 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase K04M3_07350 1458cbe0e02fd9ca2c731b99feb5e2ed 212 SUPERFAMILY SSF89392 27 210 3.33E-48 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX K04M3_07350 1458cbe0e02fd9ca2c731b99feb5e2ed 212 Gene3D G3DSA:2.50.20.10 32 211 3.6E-50 T 12-10-2018 K04M3_07350 1458cbe0e02fd9ca2c731b99feb5e2ed 212 Pfam PF03550 Outer membrane lipoprotein LolB 51 208 7.2E-42 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 K04M3_07350 1458cbe0e02fd9ca2c731b99feb5e2ed 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 15 209 5.5E-36 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 K04M3_07350 1458cbe0e02fd9ca2c731b99feb5e2ed 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 12 210 26.326 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 K04M3_37610 95cb6eb4b66a317a9d3b7a402691d698 292 SUPERFAMILY SSF46785 1 86 3.2E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_37610 95cb6eb4b66a317a9d3b7a402691d698 292 Gene3D G3DSA:3.40.190.290 93 283 9.1E-36 T 12-10-2018 K04M3_37610 95cb6eb4b66a317a9d3b7a402691d698 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_37610 95cb6eb4b66a317a9d3b7a402691d698 292 SUPERFAMILY SSF53850 93 289 2.71E-22 T 12-10-2018 K04M3_37610 95cb6eb4b66a317a9d3b7a402691d698 292 Gene3D G3DSA:1.10.10.10 1 88 2.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_37610 95cb6eb4b66a317a9d3b7a402691d698 292 Pfam PF03466 LysR substrate binding domain 111 287 1.8E-15 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 SMART SM01192 143 431 3.3E-212 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 4.5E-136 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 Gene3D G3DSA:3.30.390.10 1 127 3.1E-55 T 12-10-2018 IPR029017 Enolase-like, N-terminal K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 Gene3D G3DSA:3.20.20.120 128 433 5.3E-132 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 SMART SM01193 4 134 2.8E-93 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PIRSF PIRSF001400 1 431 1.6E-191 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 5.9E-206 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 Hamap MF_00318 Enolase [eno]. 2 417 44.379 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 SUPERFAMILY SSF51604 143 428 3.11E-126 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 SUPERFAMILY SSF54826 3 138 1.96E-56 T 12-10-2018 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_26750 fe05f49cb4824b6074098b768fa6c248 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_04000 34786211355ea7e5ff7bc26491dc6891 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 41.559 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 K04M3_04000 34786211355ea7e5ff7bc26491dc6891 268 SUPERFAMILY SSF56300 6 244 2.81E-56 T 12-10-2018 K04M3_04000 34786211355ea7e5ff7bc26491dc6891 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 1.0E-23 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 K04M3_04000 34786211355ea7e5ff7bc26491dc6891 268 Gene3D G3DSA:3.60.21.10 1 260 3.1E-70 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_04000 34786211355ea7e5ff7bc26491dc6891 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 5.6E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 Gene3D G3DSA:3.40.50.300 627 929 3.2E-120 T 12-10-2018 K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 Pfam PF09397 Ftsk gamma domain 949 1009 1.1E-25 T 12-10-2018 IPR018541 FtsK gamma domain K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 1.3E-41 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 SUPERFAMILY SSF52540 604 916 2.66E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 SMART SM00843 947 1012 5.3E-38 T 12-10-2018 IPR018541 FtsK gamma domain K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 SUPERFAMILY SSF46785 947 1012 4.9E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 Gene3D G3DSA:1.10.10.10 951 1014 4.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 Gene3D G3DSA:3.30.980.40 522 626 4.5E-33 T 12-10-2018 K04M3_10810 9c5fef75a3bc0570f47b9d9a4c35ee66 1015 Pfam PF01580 FtsK/SpoIIIE family 630 843 6.3E-71 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 K04M3_51400 45b7b7cab98c2f2be9760da3a8ee86ef 138 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 99 123 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site K04M3_51400 45b7b7cab98c2f2be9760da3a8ee86ef 138 Gene3D G3DSA:1.20.120.910 8 134 3.2E-12 T 12-10-2018 K04M3_51400 45b7b7cab98c2f2be9760da3a8ee86ef 138 SUPERFAMILY SSF57716 96 132 2.99E-6 T 12-10-2018 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 496 3.8E-215 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 Gene3D G3DSA:1.20.200.10 198 509 1.7E-123 T 12-10-2018 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.372 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 Pfam PF00221 Aromatic amino acid lyase 12 470 3.5E-189 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 SUPERFAMILY SSF48557 4 506 1.57E-193 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 K04M3_12290 1d7cae3b3e52a2433b4f89662e800b07 511 Gene3D G3DSA:1.10.275.10 2 197 1.2E-70 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal K04M3_45270 9d5997dbd60bdcc9e3a05f1cabdffc0e 345 PIRSF PIRSF029594 8 345 5.8E-137 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 K04M3_45270 9d5997dbd60bdcc9e3a05f1cabdffc0e 345 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 3.3E-52 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 K04M3_01090 54f741a187f6575fd1afd7254a0ddc6b 180 Pfam PF13521 AAA domain 4 164 1.8E-37 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain K04M3_01090 54f741a187f6575fd1afd7254a0ddc6b 180 Gene3D G3DSA:3.40.50.300 2 167 1.5E-6 T 12-10-2018 K04M3_01090 54f741a187f6575fd1afd7254a0ddc6b 180 SUPERFAMILY SSF52540 4 171 1.38E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_02100 477a65d420ca64bf759caf1896b78697 337 Pfam PF13692 Glycosyl transferases group 1 182 302 7.0E-22 T 12-10-2018 K04M3_02100 477a65d420ca64bf759caf1896b78697 337 Gene3D G3DSA:3.40.50.2000 14 324 2.6E-42 T 12-10-2018 K04M3_02100 477a65d420ca64bf759caf1896b78697 337 Pfam PF13439 Glycosyltransferase Family 4 13 167 2.0E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_02100 477a65d420ca64bf759caf1896b78697 337 Gene3D G3DSA:3.40.50.2000 167 320 2.6E-42 T 12-10-2018 K04M3_02100 477a65d420ca64bf759caf1896b78697 337 SUPERFAMILY SSF53756 3 333 2.72E-55 T 12-10-2018 K04M3_12980 5b02ad47d34e23a9543366fccc5bccfb 632 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 359 509 3.6E-7 T 12-10-2018 IPR005181 Sialate O-acetylesterase domain K04M3_12980 5b02ad47d34e23a9543366fccc5bccfb 632 Gene3D G3DSA:3.40.50.1110 270 518 5.6E-11 T 12-10-2018 IPR036514 SGNH hydrolase superfamily K04M3_12980 5b02ad47d34e23a9543366fccc5bccfb 632 SUPERFAMILY SSF52266 270 564 8.24E-18 T 12-10-2018 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 SUPERFAMILY SSF52172 3 166 1.01E-35 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 SUPERFAMILY SSF46894 147 224 2.72E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 Gene3D G3DSA:3.40.50.2300 1 123 2.4E-32 T 12-10-2018 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 SMART SM00448 3 113 8.5E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 Pfam PF00072 Response regulator receiver domain 5 114 2.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 SMART SM00862 148 224 2.6E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 9.8E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_35560 78089e8d8f9fa82a5a03c31e07dd9f9e 232 Gene3D G3DSA:1.10.10.10 124 232 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_29340 402f96e386ac24d0c19eb2beb4bc81cb 339 Gene3D G3DSA:2.40.40.20 277 339 3.2E-6 T 12-10-2018 K04M3_29340 402f96e386ac24d0c19eb2beb4bc81cb 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 8.8E-134 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 K04M3_29340 402f96e386ac24d0c19eb2beb4bc81cb 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.7E-138 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 K04M3_29340 402f96e386ac24d0c19eb2beb4bc81cb 339 SUPERFAMILY SSF55729 1 338 1.7E-129 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_29340 402f96e386ac24d0c19eb2beb4bc81cb 339 Gene3D G3DSA:3.40.630.30 1 274 4.0E-113 T 12-10-2018 K04M3_29340 402f96e386ac24d0c19eb2beb4bc81cb 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 7.3E-133 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 K04M3_18870 61d37963caf2868e20f3aeb975347a89 369 Gene3D G3DSA:3.20.20.450 130 367 1.1E-57 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_18870 61d37963caf2868e20f3aeb975347a89 369 Pfam PF00563 EAL domain 132 356 6.3E-51 T 12-10-2018 IPR001633 EAL domain K04M3_18870 61d37963caf2868e20f3aeb975347a89 369 SUPERFAMILY SSF141868 132 368 4.05E-58 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_18870 61d37963caf2868e20f3aeb975347a89 369 SMART SM00052 118 361 6.4E-38 T 12-10-2018 IPR001633 EAL domain K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 SMART SM00357 6 70 3.9E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 PRINTS PR00050 Cold shock protein signature 43 61 2.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 PRINTS PR00050 Cold shock protein signature 7 22 2.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 PRINTS PR00050 Cold shock protein signature 28 37 2.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 PIRSF PIRSF002599 1 70 3.3E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 Gene3D G3DSA:2.40.50.140 2 69 3.3E-29 T 12-10-2018 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 SUPERFAMILY SSF50249 4 69 4.71E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 7.5E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23390 b02db3aa3edd6d23f3d8e10f2d534a1e 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 Pfam PF04542 Sigma-70 region 2 14 75 6.0E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 154 2.2E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 SUPERFAMILY SSF88659 99 155 1.81E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 Pfam PF08281 Sigma-70, region 4 103 153 2.5E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 Gene3D G3DSA:1.10.10.10 100 160 4.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 Gene3D G3DSA:1.10.1740.10 1 78 1.2E-15 T 12-10-2018 K04M3_32850 f9b573ae2b3ecab869968821f9292c2d 161 SUPERFAMILY SSF88946 6 87 4.32E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_46130 205900caf0e8cd5da177b744e852ee1d 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 9.6E-97 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 K04M3_46130 205900caf0e8cd5da177b744e852ee1d 374 SUPERFAMILY SSF51395 2 369 7.33E-126 T 12-10-2018 K04M3_46130 205900caf0e8cd5da177b744e852ee1d 374 Gene3D G3DSA:3.20.20.70 5 373 6.5E-140 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 1.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 591 2.0E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 Gene3D G3DSA:3.30.450.20 41 279 1.9E-81 T 12-10-2018 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 SMART SM00388 372 440 8.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 SMART SM00387 483 593 6.5E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 Gene3D G3DSA:1.10.287.130 348 435 9.6E-20 T 12-10-2018 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 Gene3D G3DSA:3.30.565.10 443 598 4.0E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 SUPERFAMILY SSF47384 367 440 2.35E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 8.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 Gene3D G3DSA:3.30.450.20 54 175 1.9E-81 T 12-10-2018 K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 SUPERFAMILY SSF103190 48 187 1.1E-30 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 SUPERFAMILY SSF55874 442 595 4.19E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_09100 b681b40e091da0fb08dfd8acfaae296b 601 PIRSF PIRSF036431 1 599 1.8E-189 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) K04M3_47550 d5b864234d123f79d79d8a318a1c363d 180 Gene3D G3DSA:1.20.1290.10 13 180 9.7E-35 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_47550 d5b864234d123f79d79d8a318a1c363d 180 SUPERFAMILY SSF69118 1 178 1.32E-45 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 Gene3D G3DSA:2.170.130.10 38 167 2.5E-36 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 1.8E-25 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 2.2E-172 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 Pfam PF00593 TonB dependent receptor 230 710 1.4E-59 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 29 712 2.5E-181 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 Gene3D G3DSA:2.40.170.20 168 712 1.6E-112 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_41630 e316d25fab7fe0f22feac3eca8867644 712 SUPERFAMILY SSF56935 18 712 3.66E-115 T 12-10-2018 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.30.42.10 265 361 7.0E-28 T 12-10-2018 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 2.9E-31 T 12-10-2018 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.30.42.10 362 455 1.5E-28 T 12-10-2018 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 SUPERFAMILY SSF50494 37 258 1.93E-64 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 SUPERFAMILY SSF50156 378 454 1.31E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 7.6E-163 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 SUPERFAMILY SSF50156 225 350 1.1E-26 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 9.1E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 Pfam PF13180 PDZ domain 268 358 1.4E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 SMART SM00228 374 447 2.2E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 SMART SM00228 267 349 4.9E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.5E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.5E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.5E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.5E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.5E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04050 dbefec6bd4acafd34b1982dc40dbae96 455 Gene3D G3DSA:2.40.10.120 37 261 7.3E-85 T 12-10-2018 K04M3_38140 184851deddfa7d7ba6e36264e66668b1 202 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 196 1.5E-40 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_38140 184851deddfa7d7ba6e36264e66668b1 202 Pfam PF01914 MarC family integral membrane protein 4 199 2.9E-46 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_17570 248ed839c67e6a7f1c7e9db17df8afa4 137 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 127 1.6E-9 T 12-10-2018 IPR039366 YscW/ExsB K04M3_17570 248ed839c67e6a7f1c7e9db17df8afa4 137 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 9 134 1.9E-31 T 12-10-2018 IPR013400 Type III secretion system chaperone, YscW K04M3_39010 4c240389465f4ba302e06d910e096761 430 SUPERFAMILY SSF103088 310 426 1.12E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_39010 4c240389465f4ba302e06d910e096761 430 Gene3D G3DSA:3.30.1330.60 277 429 7.6E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_39010 4c240389465f4ba302e06d910e096761 430 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 291 426 7.5E-44 T 12-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain K04M3_39010 4c240389465f4ba302e06d910e096761 430 Pfam PF00691 OmpA family 322 420 3.5E-15 T 12-10-2018 IPR006665 OmpA-like domain K04M3_39010 4c240389465f4ba302e06d910e096761 430 Gene3D G3DSA:1.25.40.590 47 204 2.0E-47 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily K04M3_39010 4c240389465f4ba302e06d910e096761 430 Pfam PF09850 Type VI secretion system protein DotU 51 252 1.5E-55 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU K04M3_39010 4c240389465f4ba302e06d910e096761 430 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 49 258 8.5E-66 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU K04M3_15980 0a68852eb698379cd48b6765586803b0 243 Gene3D G3DSA:3.40.50.1220 8 227 2.2E-81 T 12-10-2018 K04M3_15980 0a68852eb698379cd48b6765586803b0 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.662 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 K04M3_15980 0a68852eb698379cd48b6765586803b0 243 Gene3D G3DSA:3.30.1600.10 22 158 2.2E-81 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily K04M3_15980 0a68852eb698379cd48b6765586803b0 243 Pfam PF02146 Sir2 family 13 186 3.3E-51 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 K04M3_15980 0a68852eb698379cd48b6765586803b0 243 SUPERFAMILY SSF52467 6 234 3.71E-72 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_17230 eb73c886fb102587f82515aea762b695 113 SUPERFAMILY SSF48452 5 110 7.15E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_17230 eb73c886fb102587f82515aea762b695 113 PIRSF PIRSF017117 1 111 4.7E-46 T 12-10-2018 IPR016684 Type III secretion system chaperone, YscY K04M3_17230 eb73c886fb102587f82515aea762b695 113 Gene3D G3DSA:1.25.40.10 2 113 4.1E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_17230 eb73c886fb102587f82515aea762b695 113 Pfam PF14559 Tetratricopeptide repeat 19 71 3.0E-9 T 12-10-2018 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.1E-29 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 95 4.0E-14 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.7E-46 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 SUPERFAMILY SSF54736 52 122 7.32E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.8E-16 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 SUPERFAMILY SSF48300 4 58 2.35E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.394 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 Gene3D G3DSA:3.30.1390.10 52 122 4.7E-30 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like K04M3_30540 dfa6ee87245dcca836c2ec2666c84e44 122 Gene3D G3DSA:1.20.5.710 2 51 2.0E-22 T 12-10-2018 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 Gene3D G3DSA:3.40.430.10 1 159 8.4E-60 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 SUPERFAMILY SSF53597 1 159 2.66E-57 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 Pfam PF00186 Dihydrofolate reductase 3 159 4.3E-61 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 PIRSF PIRSF000194 1 159 5.3E-62 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.0E-14 T 12-10-2018 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 4.0E-14 T 12-10-2018 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.0E-14 T 12-10-2018 K04M3_03370 9a36aa103d5566b57dffca7392b6cae3 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.0E-14 T 12-10-2018 K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.7E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 Gene3D G3DSA:1.10.8.60 335 440 1.3E-39 T 12-10-2018 K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 SMART SM00382 49 332 5.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 SMART SM01086 335 429 8.6E-20 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 SUPERFAMILY SSF52540 3 441 7.49E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.186 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.7E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_02550 bf880b625fc34d829fecf60c27430d23 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 4.7E-223 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 Pfam PF02080 TrkA-C domain 223 286 1.1E-6 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 397 548 3.0E-26 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 Gene3D G3DSA:3.30.70.1450 303 384 7.4E-6 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 Pfam PF06826 Predicted Permease Membrane Region 15 180 4.4E-30 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 Pfam PF06826 Predicted Permease Membrane Region 393 562 1.9E-32 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 SUPERFAMILY SSF116726 309 379 1.57E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 Gene3D G3DSA:3.30.70.1450 215 294 5.4E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 564 4.1E-203 T 12-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 K04M3_17810 c289b55335f20060e2c2eeee1cd7e494 571 SUPERFAMILY SSF116726 222 287 4.71E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 PRINTS PR00298 60kDa chaperonin signature 27 53 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 PRINTS PR00298 60kDa chaperonin signature 83 110 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 PRINTS PR00298 60kDa chaperonin signature 350 375 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 PRINTS PR00298 60kDa chaperonin signature 398 419 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 PRINTS PR00298 60kDa chaperonin signature 268 291 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.786 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 Gene3D G3DSA:3.50.7.10 192 372 1.3E-236 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.7E-250 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 Gene3D G3DSA:1.10.560.10 8 521 1.3E-236 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.5E-99 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 SUPERFAMILY SSF48592 7 521 3.33E-77 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 Gene3D G3DSA:3.30.260.10 136 410 1.3E-236 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 SUPERFAMILY SSF54849 137 203 7.55E-25 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily K04M3_47000 8d78e320fe32577e10e6f08bd761dc87 532 SUPERFAMILY SSF52029 185 376 4.36E-79 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 Gene3D G3DSA:3.40.190.290 94 289 4.6E-52 T 12-10-2018 K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 SUPERFAMILY SSF46785 7 112 2.94E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 Gene3D G3DSA:1.10.10.10 5 89 1.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.1E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 SUPERFAMILY SSF53850 92 290 6.36E-37 T 12-10-2018 K04M3_36940 b2eba8aa611111bc66be8ef1423302a6 291 Pfam PF03466 LysR substrate binding domain 91 289 1.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 1.9E-159 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 PIRSF PIRSF001549 2 422 1.1E-125 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 Gene3D G3DSA:3.30.930.10 2 323 1.4E-120 T 12-10-2018 K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 Pfam PF03129 Anticodon binding domain 329 420 9.9E-11 T 12-10-2018 IPR004154 Anticodon-binding K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.2E-46 T 12-10-2018 K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.876 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 Gene3D G3DSA:3.40.50.800 326 421 9.9E-26 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 SUPERFAMILY SSF52954 327 421 9.32E-27 T 12-10-2018 K04M3_05830 61c1ee5266ae81e949ff32f1fdb6ab0c 422 SUPERFAMILY SSF55681 5 320 1.53E-104 T 12-10-2018 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 Gene3D G3DSA:3.30.300.30 151 246 9.6E-11 T 12-10-2018 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 8.6E-39 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 PIRSF PIRSF004862 27 580 1.4E-162 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 8.0E-72 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_22880 a0e1745c77f6156c4c8ed4d58d3dcca5 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 4.4E-54 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF K04M3_27120 5507210d057944ab50aa527291c8909d 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.114 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 Gene3D G3DSA:3.40.50.1260 10 379 9.9E-151 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 Pfam PF00162 Phosphoglycerate kinase 6 373 1.8E-138 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PIRSF PIRSF000724 1 386 9.2E-134 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.0E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 Gene3D G3DSA:3.40.50.1260 165 373 9.9E-151 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_27120 5507210d057944ab50aa527291c8909d 386 SUPERFAMILY SSF53748 3 382 1.14E-143 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_52120 6c3afa6ee23fc95c26274951475722df 244 SUPERFAMILY SSF51306 13 123 8.37E-7 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily K04M3_52120 6c3afa6ee23fc95c26274951475722df 244 Gene3D G3DSA:2.10.109.10 14 125 1.9E-13 T 12-10-2018 K04M3_52120 6c3afa6ee23fc95c26274951475722df 244 Gene3D G3DSA:2.10.109.10 130 237 7.0E-19 T 12-10-2018 K04M3_52120 6c3afa6ee23fc95c26274951475722df 244 SUPERFAMILY SSF51306 136 235 1.67E-14 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily K04M3_15400 89b955004145e0cf817fdf38bcdb5e14 396 SUPERFAMILY SSF53448 48 326 1.22E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_15400 89b955004145e0cf817fdf38bcdb5e14 396 Gene3D G3DSA:3.90.550.10 39 273 5.5E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_15400 89b955004145e0cf817fdf38bcdb5e14 396 Pfam PF13641 Glycosyltransferase like family 2 58 278 4.2E-18 T 12-10-2018 K04M3_43800 bdb1696f7b8901fbe06871e42f49c1a3 128 SUPERFAMILY SSF46955 4 117 2.97E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_43800 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF09278 MerR, DNA binding 47 110 6.0E-17 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding K04M3_43800 bdb1696f7b8901fbe06871e42f49c1a3 128 Gene3D G3DSA:1.10.1660.10 1 123 9.9E-28 T 12-10-2018 K04M3_43800 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF00376 MerR family regulatory protein 5 40 7.1E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_43800 bdb1696f7b8901fbe06871e42f49c1a3 128 SMART SM00422 4 71 1.5E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_22580 8da532ac4d8c877973d87cf81c1a7edf 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.6E-20 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 K04M3_22580 8da532ac4d8c877973d87cf81c1a7edf 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 3.2E-17 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 K04M3_36030 bdab003ce27e7db0a1af94ebb86cbcaf 276 Gene3D G3DSA:3.40.50.620 1 276 4.4E-82 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_36030 bdab003ce27e7db0a1af94ebb86cbcaf 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 1.4E-65 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 K04M3_36030 bdab003ce27e7db0a1af94ebb86cbcaf 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.238 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 K04M3_36030 bdab003ce27e7db0a1af94ebb86cbcaf 276 Pfam PF02540 NAD synthase 21 270 6.9E-64 T 12-10-2018 IPR022310 NAD/GMP synthase K04M3_36030 bdab003ce27e7db0a1af94ebb86cbcaf 276 SUPERFAMILY SSF52402 2 276 1.63E-79 T 12-10-2018 K04M3_42360 157bfe46258fedb06002993b1f969b42 126 SUPERFAMILY SSF51230 3 125 5.63E-45 T 12-10-2018 IPR011053 Single hybrid motif K04M3_42360 157bfe46258fedb06002993b1f969b42 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 40.864 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 K04M3_42360 157bfe46258fedb06002993b1f969b42 126 Pfam PF01597 Glycine cleavage H-protein 5 125 1.6E-49 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate K04M3_42360 157bfe46258fedb06002993b1f969b42 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 6.0E-51 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 K04M3_42360 157bfe46258fedb06002993b1f969b42 126 Gene3D G3DSA:2.40.50.100 1 126 1.1E-49 T 12-10-2018 K04M3_24860 cf7fabfb3b7dbb587c6acb2f9a21f905 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 2.3E-48 T 12-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE K04M3_24860 cf7fabfb3b7dbb587c6acb2f9a21f905 142 SUPERFAMILY SSF82649 4 141 4.55E-50 T 12-10-2018 K04M3_24860 cf7fabfb3b7dbb587c6acb2f9a21f905 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.2E-46 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like K04M3_24860 cf7fabfb3b7dbb587c6acb2f9a21f905 142 Gene3D G3DSA:3.90.1010.10 1 142 5.5E-52 T 12-10-2018 K04M3_18180 455bd97e9976d9f42daeb32bf8ab9f9f 185 Gene3D G3DSA:3.30.460.10 13 139 2.2E-12 T 12-10-2018 K04M3_18180 455bd97e9976d9f42daeb32bf8ab9f9f 185 SUPERFAMILY SSF81301 28 131 1.5E-6 T 12-10-2018 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.957 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 Pfam PF01106 NifU-like domain 113 179 3.6E-19 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 SUPERFAMILY SSF89360 3 99 2.94E-22 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 Gene3D G3DSA:2.60.300.12 2 100 4.7E-14 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 6.0E-27 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 Gene3D G3DSA:3.30.300.130 103 191 1.9E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 1.2E-96 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 9.3E-13 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 K04M3_01320 53a8040c44eb4d90be1d91f18401691f 194 SUPERFAMILY SSF117916 97 187 5.01E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 Pfam PF00920 Dehydratase family 68 594 2.6E-148 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.374 T 12-10-2018 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 4.3E-250 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 Gene3D G3DSA:3.50.30.80 418 562 7.2E-48 T 12-10-2018 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 SUPERFAMILY SSF52016 418 596 4.47E-52 T 12-10-2018 K04M3_00520 1b70c816518d3af6782f7993f3354be2 598 SUPERFAMILY SSF143975 3 417 8.37E-131 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 K04M3_10460 afae82dda089a8279fb99afd22cdf6ef 355 Pfam PF06519 TolA C-terminal 254 352 4.7E-30 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 K04M3_10460 afae82dda089a8279fb99afd22cdf6ef 355 Gene3D G3DSA:3.30.1150.10 254 353 3.8E-21 T 12-10-2018 K04M3_10460 afae82dda089a8279fb99afd22cdf6ef 355 TIGRFAM TIGR02794 tolA_full: protein TolA 13 353 5.4E-87 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 K04M3_10460 afae82dda089a8279fb99afd22cdf6ef 355 SUPERFAMILY SSF74653 264 354 5.69E-13 T 12-10-2018 K04M3_16070 90129b06b320fa203df4392688712ed0 297 PIRSF PIRSF004976 2 282 6.8E-70 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 K04M3_16070 90129b06b320fa203df4392688712ed0 297 Pfam PF01171 PP-loop family 41 203 4.9E-16 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 K04M3_16070 90129b06b320fa203df4392688712ed0 297 SUPERFAMILY SSF52402 15 233 6.75E-54 T 12-10-2018 K04M3_16070 90129b06b320fa203df4392688712ed0 297 Gene3D G3DSA:3.40.50.620 2 264 8.4E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_16070 90129b06b320fa203df4392688712ed0 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.382 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 K04M3_32830 de108096e5041fe03ce6caf4dafa0f74 330 SUPERFAMILY SSF50129 16 153 1.83E-24 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_32830 de108096e5041fe03ce6caf4dafa0f74 330 Gene3D G3DSA:3.40.50.720 129 296 4.7E-67 T 12-10-2018 K04M3_32830 de108096e5041fe03ce6caf4dafa0f74 330 SUPERFAMILY SSF51735 124 289 1.2E-25 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_32830 de108096e5041fe03ce6caf4dafa0f74 330 SMART SM00829 18 328 5.4E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_32830 de108096e5041fe03ce6caf4dafa0f74 330 Gene3D G3DSA:3.90.180.10 14 313 4.7E-67 T 12-10-2018 K04M3_32830 de108096e5041fe03ce6caf4dafa0f74 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 98 8.6E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_00650 d578a9b9ee1b64cb97fc346585593f3c 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 1.3E-69 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 K04M3_00650 d578a9b9ee1b64cb97fc346585593f3c 292 Pfam PF00892 EamA-like transporter family 138 275 4.8E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_00650 d578a9b9ee1b64cb97fc346585593f3c 292 SUPERFAMILY SSF103481 184 276 4.71E-6 T 12-10-2018 K04M3_00650 d578a9b9ee1b64cb97fc346585593f3c 292 SUPERFAMILY SSF103481 35 131 9.81E-6 T 12-10-2018 K04M3_34680 93b4218418329dfe2f1f39399be49faa 148 SUPERFAMILY SSF55961 2 146 3.26E-19 T 12-10-2018 K04M3_34680 93b4218418329dfe2f1f39399be49faa 148 Gene3D G3DSA:3.30.530.20 1 148 1.4E-16 T 12-10-2018 IPR023393 START-like domain superfamily K04M3_34680 93b4218418329dfe2f1f39399be49faa 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 141 1.5E-5 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like K04M3_35780 b8b8a8d8e903d4edfd5ffe9eabf6ca7e 106 SMART SM01022 8 106 1.6E-25 T 12-10-2018 IPR007374 ASCH domain K04M3_35780 b8b8a8d8e903d4edfd5ffe9eabf6ca7e 106 PIRSF PIRSF029143 3 106 2.7E-46 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 K04M3_35780 b8b8a8d8e903d4edfd5ffe9eabf6ca7e 106 SUPERFAMILY SSF88697 5 105 5.72E-32 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_35780 b8b8a8d8e903d4edfd5ffe9eabf6ca7e 106 Gene3D G3DSA:2.30.130.30 3 105 1.9E-43 T 12-10-2018 K04M3_35780 b8b8a8d8e903d4edfd5ffe9eabf6ca7e 106 Pfam PF04266 ASCH domain 9 105 1.2E-15 T 12-10-2018 IPR007374 ASCH domain K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 161 4.5E-21 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 SUPERFAMILY SSF55920 161 393 4.06E-52 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 SUPERFAMILY SSF53092 2 159 1.05E-39 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 TIGRFAM TIGR02993 ectoine_eutD: ectoine utilization protein EutD 4 394 3.8E-186 T 12-10-2018 IPR014335 Ectoine utilization protein EutD KEGG: 00260+3.5.4.44|MetaCyc: PWY-7855 K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 Gene3D G3DSA:3.40.350.10 2 159 2.6E-35 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 Gene3D G3DSA:3.90.230.10 160 393 4.0E-40 T 12-10-2018 K04M3_46190 9bf121755d04cfcbe75b61f16b70040e 395 Pfam PF00557 Metallopeptidase family M24 169 377 1.8E-30 T 12-10-2018 IPR000994 Peptidase M24 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 Gene3D G3DSA:2.30.110.50 17 332 3.0E-95 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 4.4E-79 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 6.0E-131 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 Gene3D G3DSA:3.30.1920.30 229 288 3.0E-95 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 SUPERFAMILY SSF69279 200 364 8.16E-33 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 1.3E-200 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 Gene3D G3DSA:2.40.50.230 359 458 6.9E-43 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 SUPERFAMILY SSF69279 7 183 3.4E-58 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 SUPERFAMILY SSF69255 367 454 4.18E-32 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 Gene3D G3DSA:3.55.50.10 96 187 3.0E-95 T 12-10-2018 K04M3_44510 aced6b0f5000bceb72b850cdf4a3beb2 692 SUPERFAMILY SSF69349 444 683 1.18E-46 T 12-10-2018 K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 PRINTS PR00990 Ribokinase signature 22 41 1.0E-5 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 PRINTS PR00990 Ribokinase signature 175 190 1.0E-5 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 PRINTS PR00990 Ribokinase signature 214 225 1.0E-5 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 SUPERFAMILY SSF53613 1 305 1.5E-82 T 12-10-2018 IPR029056 Ribokinase-like K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 Gene3D G3DSA:3.40.1190.20 1 306 1.6E-96 T 12-10-2018 IPR029056 Ribokinase-like K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 K04M3_45900 aa0e74d1979e443f0ca477789b12e363 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 3.1E-69 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_40470 f0170ccdea0d94ec1a11db4cdb3e7316 251 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 2.4E-47 T 12-10-2018 K04M3_40470 f0170ccdea0d94ec1a11db4cdb3e7316 251 Gene3D G3DSA:3.40.190.10 28 249 2.3E-78 T 12-10-2018 K04M3_40470 f0170ccdea0d94ec1a11db4cdb3e7316 251 Gene3D G3DSA:3.40.190.10 104 215 2.3E-78 T 12-10-2018 K04M3_40470 f0170ccdea0d94ec1a11db4cdb3e7316 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 1.3E-61 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 K04M3_40470 f0170ccdea0d94ec1a11db4cdb3e7316 251 SUPERFAMILY SSF53850 25 249 5.2E-63 T 12-10-2018 K04M3_40470 f0170ccdea0d94ec1a11db4cdb3e7316 251 PIRSF PIRSF004846 3 251 4.5E-69 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 K04M3_51060 d574e04deee61f5beb66d746344aa56c 2221 Pfam PF04851 Type III restriction enzyme, res subunit 615 866 1.0E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 K04M3_51060 d574e04deee61f5beb66d746344aa56c 2221 SUPERFAMILY SSF52540 600 890 4.61E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 Gene3D G3DSA:1.10.10.10 123 219 1.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-36 T 12-10-2018 K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 SMART SM00862 145 216 4.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 Pfam PF00072 Response regulator receiver domain 3 113 4.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 SUPERFAMILY SSF52172 1 133 1.71E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_11740 f0e80e828aa6b169fc1e7499376c0d5c 219 SMART SM00448 1 112 9.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_10330 f6a1055f969365b59ca40868b86a2e50 277 Gene3D G3DSA:3.20.20.410 1 258 3.8E-45 T 12-10-2018 IPR036520 UPF0759 superfamily K04M3_10330 f6a1055f969365b59ca40868b86a2e50 277 Pfam PF01904 Protein of unknown function DUF72 12 250 1.5E-58 T 12-10-2018 IPR002763 Protein of unknown function DUF72 K04M3_10330 f6a1055f969365b59ca40868b86a2e50 277 SUPERFAMILY SSF117396 1 253 6.93E-72 T 12-10-2018 IPR036520 UPF0759 superfamily K04M3_34140 992610e969fa843e45d7192705ed87f6 382 Pfam PF01594 AI-2E family transporter 24 347 2.3E-32 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SMART SM00086 216 258 0.0011 T 12-10-2018 IPR001610 PAC motif K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SMART SM00086 94 136 36.0 T 12-10-2018 IPR001610 PAC motif K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SMART SM00091 19 88 19.0 T 12-10-2018 IPR000014 PAS domain K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SMART SM00091 141 211 0.0024 T 12-10-2018 IPR000014 PAS domain K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SMART SM00283 247 434 7.8E-16 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 435 7.5E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SUPERFAMILY SSF55785 131 256 6.28E-20 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SUPERFAMILY SSF55785 7 128 1.74E-10 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 Gene3D G3DSA:3.30.450.20 132 248 7.0E-22 T 12-10-2018 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 Gene3D G3DSA:3.30.450.20 19 131 3.1E-10 T 12-10-2018 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 Pfam PF08447 PAS fold 166 251 6.0E-15 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 Gene3D G3DSA:1.10.287.950 249 437 8.8E-50 T 12-10-2018 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 264 3.2E-18 T 12-10-2018 IPR000014 PAS domain K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 SUPERFAMILY SSF58104 172 434 3.01E-54 T 12-10-2018 K04M3_38160 609c659960e1ec35b48180f67e70e2bb 437 Pfam PF13426 PAS domain 37 132 4.7E-8 T 12-10-2018 IPR000014 PAS domain K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 Gene3D G3DSA:1.20.58.1390 101 315 4.6E-110 T 12-10-2018 K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 PIRSF PIRSF005739 3 345 1.3E-9 T 12-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 Gene3D G3DSA:3.40.50.150 166 350 4.6E-110 T 12-10-2018 K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 SUPERFAMILY SSF53335 99 341 2.15E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 Pfam PF00891 O-methyltransferase 112 338 5.3E-14 T 12-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 Gene3D G3DSA:1.10.10.10 2 98 1.6E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_08950 ea6a63ed9e1c38d32b418658f3abec55 355 SUPERFAMILY SSF46785 19 99 6.53E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_44930 c143c7b0378ae45306fd2aef415520de 350 PIRSF PIRSF001361 1 350 3.5E-162 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 K04M3_44930 c143c7b0378ae45306fd2aef415520de 350 SUPERFAMILY SSF51569 6 347 7.75E-137 T 12-10-2018 K04M3_44930 c143c7b0378ae45306fd2aef415520de 350 Gene3D G3DSA:3.20.20.70 1 349 1.6E-165 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_44930 c143c7b0378ae45306fd2aef415520de 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 6.4E-170 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 K04M3_44930 c143c7b0378ae45306fd2aef415520de 350 Pfam PF00793 DAHP synthetase I family 38 337 5.6E-106 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 K04M3_21500 1d9c85430fa9ea42b9490e14e0d4617c 159 SUPERFAMILY SSF55040 11 155 1.96E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21500 1d9c85430fa9ea42b9490e14e0d4617c 159 Pfam PF01967 MoaC family 15 150 1.0E-55 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21500 1d9c85430fa9ea42b9490e14e0d4617c 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.0E-71 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21500 1d9c85430fa9ea42b9490e14e0d4617c 159 Gene3D G3DSA:3.30.70.640 1 159 6.3E-70 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21500 1d9c85430fa9ea42b9490e14e0d4617c 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.907 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 SMART SM00490 260 341 2.1E-31 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 Pfam PF00271 Helicase conserved C-terminal domain 234 341 1.9E-31 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 Gene3D G3DSA:3.40.50.300 217 407 8.2E-52 T 12-10-2018 K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 SUPERFAMILY SSF52540 76 358 7.32E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.882 T 12-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 6.2E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 Gene3D G3DSA:3.40.50.300 1 211 1.3E-70 T 12-10-2018 K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_04740 f0c79512740c1a004d2e0d6a7ef046a8 407 SMART SM00487 22 222 4.6E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_38520 9212aeca755b5ddf39cca23fa1a956cb 215 SUPERFAMILY SSF47616 83 198 2.76E-14 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_38520 9212aeca755b5ddf39cca23fa1a956cb 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 4.7E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_38520 9212aeca755b5ddf39cca23fa1a956cb 215 Gene3D G3DSA:3.40.30.10 6 195 6.8E-55 T 12-10-2018 K04M3_38520 9212aeca755b5ddf39cca23fa1a956cb 215 Pfam PF14834 Glutathione S-transferase, C-terminal domain 89 195 3.1E-7 T 12-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 K04M3_38520 9212aeca755b5ddf39cca23fa1a956cb 215 SUPERFAMILY SSF52833 5 84 2.29E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_38520 9212aeca755b5ddf39cca23fa1a956cb 215 Gene3D G3DSA:1.20.1050.10 84 191 6.8E-55 T 12-10-2018 K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 6.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 SUPERFAMILY SSF54523 5 149 7.85E-15 T 12-10-2018 K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 Pfam PF12019 Type II transport protein GspH 41 139 1.3E-7 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 Gene3D G3DSA:3.30.700.10 5 148 5.3E-10 T 12-10-2018 K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 8.3E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_06360 60e1706e23eea49f6a73d4b215880eb9 169 PIRSF PIRSF024622 1 169 8.5E-61 T 12-10-2018 IPR016824 Tfp pilus assembly protein FimT K04M3_29870 2e77446d68474e830ab1e9975649be88 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.6E-49 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 K04M3_29870 2e77446d68474e830ab1e9975649be88 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 K04M3_29870 2e77446d68474e830ab1e9975649be88 127 Gene3D G3DSA:1.20.1300.10 1 127 3.4E-48 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29870 2e77446d68474e830ab1e9975649be88 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 K04M3_29870 2e77446d68474e830ab1e9975649be88 127 PIRSF PIRSF000180 1 127 2.1E-57 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 K04M3_29870 2e77446d68474e830ab1e9975649be88 127 SUPERFAMILY SSF81343 1 127 1.02E-52 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_50590 88c7203390ee6abb9148e7817d3c2856 923 Pfam PF12696 TraM recognition site of TraD and TraG 439 558 3.1E-5 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site K04M3_50590 88c7203390ee6abb9148e7817d3c2856 923 SUPERFAMILY SSF52540 106 567 7.31E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_50590 88c7203390ee6abb9148e7817d3c2856 923 Gene3D G3DSA:3.40.50.300 356 579 7.5E-13 T 12-10-2018 K04M3_33870 a969755c13327330037fe63a5d32b58c 102 SUPERFAMILY SSF54909 3 96 9.12E-34 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_33870 a969755c13327330037fe63a5d32b58c 102 Gene3D G3DSA:3.30.70.100 1 102 2.6E-41 T 12-10-2018 K04M3_33870 a969755c13327330037fe63a5d32b58c 102 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 2.4E-41 T 12-10-2018 IPR014910 Putative monooxygenase YdhR K04M3_43430 3b90802389b200a6892189eef151d4f0 305 SUPERFAMILY SSF53613 1 302 1.37E-86 T 12-10-2018 IPR029056 Ribokinase-like K04M3_43430 3b90802389b200a6892189eef151d4f0 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.476 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 PRINTS PR00990 Ribokinase signature 33 52 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 PRINTS PR00990 Ribokinase signature 173 188 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 PRINTS PR00990 Ribokinase signature 217 228 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 PRINTS PR00990 Ribokinase signature 6 27 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 PRINTS PR00990 Ribokinase signature 105 118 2.1E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.4E-112 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 K04M3_43430 3b90802389b200a6892189eef151d4f0 305 Gene3D G3DSA:3.40.1190.20 1 300 2.4E-106 T 12-10-2018 IPR029056 Ribokinase-like K04M3_43430 3b90802389b200a6892189eef151d4f0 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 1.4E-75 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 Gene3D G3DSA:3.30.110.10 34 129 7.1E-40 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 SUPERFAMILY SSF54364 1 36 1.7E-13 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 Gene3D G3DSA:3.10.20.80 1 33 1.8E-14 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 5.7E-59 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 SUPERFAMILY SSF55200 41 129 1.44E-35 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 3.8E-38 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 5.0E-14 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 K04M3_12370 10e8c36a9bba2018bdd8a37eb9fe44b2 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 K04M3_21870 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 8.6E-99 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal K04M3_21870 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 Pfam PF00884 Sulfatase 266 515 9.8E-24 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_21870 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 Gene3D G3DSA:3.40.720.10 248 540 1.4E-39 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_21870 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 SUPERFAMILY SSF53649 257 584 4.07E-51 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_21870 48f00a2b9b8346ce4b18a1bd9c7b8af5 602 PIRSF PIRSF004950 6 600 3.9E-251 T 12-10-2018 IPR012159 Inner membrane protein YejM K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 Gene3D G3DSA:3.90.79.10 131 262 5.5E-40 T 12-10-2018 K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 SUPERFAMILY SSF55811 63 248 8.39E-43 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 Gene3D G3DSA:3.90.79.20 3 130 8.5E-32 T 12-10-2018 K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 Pfam PF00293 NUDIX domain 137 238 2.2E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 4.7E-9 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 K04M3_30500 40b12faf1e7a7749b6a6d78e1f4364ff 265 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 262 43.596 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 K04M3_38480 79054cfde1ace3ef68b0f4e692c7bf91 229 SUPERFAMILY SSF161098 10 202 9.03E-38 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_38480 79054cfde1ace3ef68b0f4e692c7bf91 229 Gene3D G3DSA:1.10.3720.10 2 218 2.2E-46 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_38480 79054cfde1ace3ef68b0f4e692c7bf91 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.2E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_38480 79054cfde1ace3ef68b0f4e692c7bf91 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 4.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 SMART SM01228 546 617 1.4E-42 T 12-10-2018 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 SUPERFAMILY SSF51905 6 261 8.76E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Gene3D G3DSA:3.50.50.60 1 232 2.0E-90 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Gene3D G3DSA:3.50.50.60 296 458 3.5E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Gene3D G3DSA:1.10.10.1800 459 550 6.6E-32 T 12-10-2018 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Pfam PF13932 GidA associated domain 403 616 3.8E-76 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.51 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.2E-293 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Pfam PF01134 Glucose inhibited division protein A 8 398 1.8E-168 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 Gene3D G3DSA:1.10.150.570 569 622 8.4E-23 T 12-10-2018 K04M3_32340 fc3320e8e45bb939c68998c76655cb4c 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 K04M3_26980 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 K04M3_26980 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 63 1.6E-29 T 12-10-2018 K04M3_26980 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.9E-29 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 K04M3_05280 82e51d531c965b7696a040517451505e 857 SUPERFAMILY SSF52540 159 545 5.58E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05280 82e51d531c965b7696a040517451505e 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 K04M3_05280 82e51d531c965b7696a040517451505e 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.0E-28 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_05280 82e51d531c965b7696a040517451505e 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.9E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 SUPERFAMILY SSF81923 4 156 7.46E-43 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_05280 82e51d531c965b7696a040517451505e 857 SMART SM00382 198 344 3.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05280 82e51d531c965b7696a040517451505e 857 SMART SM00382 597 767 1.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05280 82e51d531c965b7696a040517451505e 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-11 T 12-10-2018 IPR004176 Clp, N-terminal K04M3_05280 82e51d531c965b7696a040517451505e 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.1E-13 T 12-10-2018 IPR004176 Clp, N-terminal K04M3_05280 82e51d531c965b7696a040517451505e 857 Gene3D G3DSA:1.10.1780.10 1 148 6.7E-33 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 K04M3_05280 82e51d531c965b7696a040517451505e 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.4E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 Gene3D G3DSA:1.10.8.60 766 857 3.5E-28 T 12-10-2018 K04M3_05280 82e51d531c965b7696a040517451505e 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 SUPERFAMILY SSF52540 546 853 7.77E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05280 82e51d531c965b7696a040517451505e 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 K04M3_05280 82e51d531c965b7696a040517451505e 857 Gene3D G3DSA:3.40.50.300 348 544 1.6E-67 T 12-10-2018 K04M3_05280 82e51d531c965b7696a040517451505e 857 Gene3D G3DSA:3.40.50.300 158 347 7.3E-75 T 12-10-2018 K04M3_05280 82e51d531c965b7696a040517451505e 857 Gene3D G3DSA:3.40.50.300 550 764 2.0E-89 T 12-10-2018 K04M3_05280 82e51d531c965b7696a040517451505e 857 SMART SM01086 766 855 6.7E-38 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_05280 82e51d531c965b7696a040517451505e 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 K04M3_03100 7172b21e16cbcb41f39c6094940c498c 66 Gene3D G3DSA:3.30.1910.10 2 65 2.4E-19 T 12-10-2018 K04M3_03100 7172b21e16cbcb41f39c6094940c498c 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 1.8E-25 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 K04M3_03100 7172b21e16cbcb41f39c6094940c498c 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-26 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 K04M3_39510 9ca1449a95fbe587d1a7f3307e4127d2 213 Gene3D G3DSA:3.30.1360.170 1 213 5.3E-62 T 12-10-2018 K04M3_39510 9ca1449a95fbe587d1a7f3307e4127d2 213 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 5 208 5.6E-40 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 K04M3_39510 9ca1449a95fbe587d1a7f3307e4127d2 213 SUPERFAMILY SSF69796 3 211 7.06E-44 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 K04M3_39510 9ca1449a95fbe587d1a7f3307e4127d2 213 Pfam PF02511 Thymidylate synthase complementing protein 7 205 7.0E-42 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 K04M3_22530 8f2bbddb6e510a2617d0cbc22b22ae1e 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 115 4.2E-31 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI K04M3_22530 8f2bbddb6e510a2617d0cbc22b22ae1e 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.1E-8 T 12-10-2018 K04M3_22530 8f2bbddb6e510a2617d0cbc22b22ae1e 404 SUPERFAMILY SSF48452 161 265 9.8E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_22530 8f2bbddb6e510a2617d0cbc22b22ae1e 404 Gene3D G3DSA:1.25.40.10 153 293 7.3E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_22020 0fb096d6532effdb77de7ac3984ad338 294 PIRSF PIRSF016020 4 294 4.5E-65 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 K04M3_22020 0fb096d6532effdb77de7ac3984ad338 294 Pfam PF01263 Aldose 1-epimerase 27 291 2.8E-52 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 K04M3_22020 0fb096d6532effdb77de7ac3984ad338 294 Gene3D G3DSA:2.70.98.10 2 294 2.2E-86 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 K04M3_22020 0fb096d6532effdb77de7ac3984ad338 294 SUPERFAMILY SSF74650 8 289 2.89E-76 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 SUPERFAMILY SSF46785 2 84 1.96E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 Pfam PF03466 LysR substrate binding domain 92 296 2.2E-23 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 Gene3D G3DSA:3.40.190.10 88 292 7.9E-47 T 12-10-2018 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 SUPERFAMILY SSF53850 88 295 1.81E-38 T 12-10-2018 K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 Gene3D G3DSA:1.10.10.10 1 86 5.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_45430 b3e79a1c0c9b4f668a4ffb1eb95262d8 304 Gene3D G3DSA:3.40.190.10 168 267 7.9E-47 T 12-10-2018 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 SMART SM00382 113 266 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 SMART SM00994 13 52 1.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 12-10-2018 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.1E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Gene3D G3DSA:3.40.50.300 59 317 1.1E-108 T 12-10-2018 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 SMART SM01086 319 414 4.5E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Gene3D G3DSA:1.10.8.60 318 426 3.7E-41 T 12-10-2018 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.0E-15 T 12-10-2018 IPR019489 Clp ATPase, C-terminal K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 1.5E-209 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 SUPERFAMILY SSF52540 63 404 5.86E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09130 58992a5db86d9b80f77ee02f50333449 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.321 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 K04M3_24210 506108e67351359f3215d14fe436e84d 222 SUPERFAMILY SSF158682 81 221 1.96E-28 T 12-10-2018 IPR029024 TerB-like K04M3_24210 506108e67351359f3215d14fe436e84d 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 1.8E-62 T 12-10-2018 IPR007486 Inner membrane protein YebE K04M3_24210 506108e67351359f3215d14fe436e84d 222 Gene3D G3DSA:1.10.3680.10 99 222 4.2E-12 T 12-10-2018 IPR029024 TerB-like K04M3_29860 261b59d050877e157b2988f37c9e1752 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 K04M3_29860 261b59d050877e157b2988f37c9e1752 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.7E-32 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29860 261b59d050877e157b2988f37c9e1752 252 Gene3D G3DSA:3.10.20.30 1 106 4.0E-35 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_29860 261b59d050877e157b2988f37c9e1752 252 SUPERFAMILY SSF46548 107 226 6.45E-31 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_29860 261b59d050877e157b2988f37c9e1752 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.4E-95 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29860 261b59d050877e157b2988f37c9e1752 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.2E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_29860 261b59d050877e157b2988f37c9e1752 252 SUPERFAMILY SSF54292 5 106 1.1E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_29860 261b59d050877e157b2988f37c9e1752 252 Gene3D G3DSA:1.10.1060.10 107 244 2.4E-50 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_29860 261b59d050877e157b2988f37c9e1752 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 Gene3D G3DSA:3.40.50.2300 155 326 2.1E-25 T 12-10-2018 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 12-10-2018 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 Gene3D G3DSA:3.40.50.2300 62 154 1.1E-20 T 12-10-2018 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 Gene3D G3DSA:1.10.260.40 1 61 8.8E-27 T 12-10-2018 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 8.4E-150 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 SUPERFAMILY SSF53822 61 313 1.3E-39 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 251 1.4E-13 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 SMART SM00354 1 73 6.1E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 SUPERFAMILY SSF47413 1 58 1.05E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_42240 27f454ac0ed6659c0af3f2c1f8427759 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.5E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 SMART SM00267 267 434 1.4E-46 T 12-10-2018 IPR000160 GGDEF domain K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 SUPERFAMILY SSF49785 39 215 4.25E-12 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 SUPERFAMILY SSF55073 283 432 5.1E-40 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 39 167 6.0E-4 T 12-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 433 1.1E-41 T 12-10-2018 IPR000160 GGDEF domain K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 Gene3D G3DSA:3.30.70.270 264 434 1.4E-47 T 12-10-2018 K04M3_12120 c122863a618dae2f7ba7b70820bde67e 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 1.1E-38 T 12-10-2018 IPR000160 GGDEF domain K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 4.8E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 SUPERFAMILY SSF55103 252 538 2.62E-52 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 SUPERFAMILY SSF46548 568 685 1.27E-6 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 Pfam PF01565 FAD binding domain 52 191 4.5E-36 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 Gene3D G3DSA:3.30.465.40 17 208 4.3E-48 T 12-10-2018 K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 SUPERFAMILY SSF56176 29 277 5.72E-51 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_12260 a229049a5ea0c5a3f0d1c6fa02fadec1 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 2.7E-61 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 Gene3D G3DSA:3.40.190.10 91 287 2.1E-68 T 12-10-2018 K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 Gene3D G3DSA:1.10.10.10 1 86 9.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 Gene3D G3DSA:3.40.190.10 162 260 2.1E-68 T 12-10-2018 K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 Pfam PF03466 LysR substrate binding domain 88 287 3.4E-44 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 SUPERFAMILY SSF46785 1 111 1.86E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 SUPERFAMILY SSF53850 89 293 6.36E-47 T 12-10-2018 K04M3_46020 0ab5d3f15f15cf6569fcd580b0148cde 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_20730 300255bcd8d3ed2bdee18e29593c5233 203 SUPERFAMILY SSF46626 120 201 1.75E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20730 300255bcd8d3ed2bdee18e29593c5233 203 Gene3D G3DSA:1.10.760.10 118 201 8.5E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20730 300255bcd8d3ed2bdee18e29593c5233 203 Gene3D G3DSA:1.10.760.10 26 96 1.5E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_20730 300255bcd8d3ed2bdee18e29593c5233 203 Pfam PF00034 Cytochrome c 133 201 1.2E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_20730 300255bcd8d3ed2bdee18e29593c5233 203 PIRSF PIRSF000005 1 203 2.1E-62 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 K04M3_20730 300255bcd8d3ed2bdee18e29593c5233 203 SUPERFAMILY SSF46626 29 98 4.17E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_47200 93c7eee5d2cf350e40c47ef0ea94296d 265 Gene3D G3DSA:2.30.30.760 206 265 5.7E-12 T 12-10-2018 K04M3_47200 93c7eee5d2cf350e40c47ef0ea94296d 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 5.2E-39 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal K04M3_47200 93c7eee5d2cf350e40c47ef0ea94296d 265 SMART SM00858 141 202 4.8E-8 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 K04M3_47200 93c7eee5d2cf350e40c47ef0ea94296d 265 Gene3D G3DSA:3.90.1210.10 141 205 6.2E-5 T 12-10-2018 K04M3_47200 93c7eee5d2cf350e40c47ef0ea94296d 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 57 261 6.6E-43 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 Pfam PF06481 COX Aromatic Rich Motif 239 283 5.5E-13 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 Gene3D G3DSA:2.60.40.420 113 281 2.9E-54 T 12-10-2018 IPR008972 Cupredoxin K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 239 1.0E-113 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 SUPERFAMILY SSF81464 29 116 1.14E-23 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 Gene3D G3DSA:1.10.287.90 27 112 4.3E-34 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 221 6.6E-8 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 PIRSF PIRSF000292 1 292 2.6E-127 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 K04M3_38300 318a9da85a1f3a286be903e9ac86ba13 293 SUPERFAMILY SSF49503 119 280 1.34E-49 T 12-10-2018 IPR008972 Cupredoxin K04M3_29280 315dda3abefa4641f4b5609c2b0809d4 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 12-10-2018 IPR000952 AB hydrolase 4, conserved site K04M3_29280 315dda3abefa4641f4b5609c2b0809d4 335 Gene3D G3DSA:3.40.50.1820 30 313 5.6E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_29280 315dda3abefa4641f4b5609c2b0809d4 335 SUPERFAMILY SSF53474 32 299 2.55E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_29280 315dda3abefa4641f4b5609c2b0809d4 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 2.5E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_29280 315dda3abefa4641f4b5609c2b0809d4 335 PIRSF PIRSF005211 1 335 1.7E-104 T 12-10-2018 IPR012020 AB hydrolase 4 family K04M3_39630 68e3f93b1378b1cf53248e21dbe33d1b 146 ProDom PD084413 INTERNAL VIRION A GENE 21 135 5.0E-8 T 12-10-2018 IPR020335 Bacteriophage T7, probable scaffold protein Gp13 K04M3_39630 68e3f93b1378b1cf53248e21dbe33d1b 146 SUPERFAMILY SSF55729 44 143 1.13E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_39630 68e3f93b1378b1cf53248e21dbe33d1b 146 Pfam PF11090 Protein of unknown function (DUF2833) 50 126 1.3E-6 T 12-10-2018 IPR020335 Bacteriophage T7, probable scaffold protein Gp13 K04M3_36500 3079e37ede0ea8e54dca54dfd78c226f 205 Pfam PF02525 Flavodoxin-like fold 4 173 1.2E-44 T 12-10-2018 IPR003680 Flavodoxin-like fold K04M3_36500 3079e37ede0ea8e54dca54dfd78c226f 205 SUPERFAMILY SSF52218 4 180 7.12E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_36500 3079e37ede0ea8e54dca54dfd78c226f 205 Gene3D G3DSA:3.40.50.360 1 181 8.8E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.1E-21 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 3.1E-27 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.083 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 PIRSF PIRSF002211 1 58 6.5E-29 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 Gene3D G3DSA:3.30.1390.20 1 58 2.9E-28 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site K04M3_02810 43ecbee32af215b0bd10414e148ba336 58 SUPERFAMILY SSF55129 1 58 2.22E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily K04M3_04770 4d8300e7a71581fdf96eb5a5799b33bf 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 K04M3_04770 4d8300e7a71581fdf96eb5a5799b33bf 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.9E-68 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 K04M3_04770 4d8300e7a71581fdf96eb5a5799b33bf 172 Pfam PF00258 Flavodoxin 5 160 1.3E-27 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 K04M3_04770 4d8300e7a71581fdf96eb5a5799b33bf 172 Gene3D G3DSA:3.40.50.360 1 172 8.5E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_04770 4d8300e7a71581fdf96eb5a5799b33bf 172 PIRSF PIRSF038996 1 171 9.4E-60 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 K04M3_04770 4d8300e7a71581fdf96eb5a5799b33bf 172 SUPERFAMILY SSF52218 1 167 5.03E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_28620 d62540bf20a36665670978b474ea8577 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 2.5E-87 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 K04M3_28620 d62540bf20a36665670978b474ea8577 259 PIRSF PIRSF000857 6 253 2.0E-55 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 K04M3_28620 d62540bf20a36665670978b474ea8577 259 Gene3D G3DSA:3.40.50.620 7 221 6.1E-66 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_28620 d62540bf20a36665670978b474ea8577 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 6.2E-50 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 K04M3_28620 d62540bf20a36665670978b474ea8577 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 7.3E-93 T 12-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 K04M3_28620 d62540bf20a36665670978b474ea8577 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.168 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 K04M3_28620 d62540bf20a36665670978b474ea8577 259 SUPERFAMILY SSF52402 26 213 4.1E-55 T 12-10-2018 K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 2.3E-67 T 12-10-2018 K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 Gene3D G3DSA:3.40.50.720 1 245 3.4E-89 T 12-10-2018 K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 1.8E-100 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 1.7E-4 T 12-10-2018 K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 SUPERFAMILY SSF51735 5 244 1.95E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.8E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21090 848c535808c8f3d89d84712e53f6e8af 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_19300 c64862658922b4a51edfd15a7cceccbe 631 SUPERFAMILY SSF52980 482 544 3.49E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_19300 c64862658922b4a51edfd15a7cceccbe 631 Gene3D G3DSA:3.40.1350.10 473 594 5.8E-7 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 K04M3_05160 9f1034b82914be69ca1404aaca7e1db9 333 SUPERFAMILY SSF51261 127 271 2.09E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_05160 9f1034b82914be69ca1404aaca7e1db9 333 Gene3D G3DSA:2.70.70.10 124 276 5.2E-43 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_05160 9f1034b82914be69ca1404aaca7e1db9 333 Pfam PF01551 Peptidase family M23 174 269 9.5E-31 T 12-10-2018 IPR016047 Peptidase M23 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 SUPERFAMILY SSF53756 11 492 5.02E-109 T 12-10-2018 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 15 490 1.3E-167 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 Gene3D G3DSA:3.40.50.2000 264 475 1.5E-158 T 12-10-2018 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 Gene3D G3DSA:3.40.50.2000 16 489 1.5E-158 T 12-10-2018 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 Pfam PF08323 Starch synthase catalytic domain 16 247 1.3E-66 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 Pfam PF00534 Glycosyl transferases group 1 307 453 1.2E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_10140 3292978d56ef082050028dd96d8ab5ff 493 Hamap MF_00484 Glycogen synthase [glgA]. 14 491 39.39 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 K04M3_46570 e6dab507ef79d65966fab27a2742f56e 156 PIRSF PIRSF021320 1 156 1.6E-48 T 12-10-2018 IPR009326 Protein of unknown function DUF984 K04M3_46570 e6dab507ef79d65966fab27a2742f56e 156 Pfam PF04266 ASCH domain 41 153 5.0E-23 T 12-10-2018 IPR007374 ASCH domain K04M3_46570 e6dab507ef79d65966fab27a2742f56e 156 SMART SM01022 30 153 1.4E-34 T 12-10-2018 IPR007374 ASCH domain K04M3_46570 e6dab507ef79d65966fab27a2742f56e 156 Gene3D G3DSA:3.10.400.10 1 153 3.4E-57 T 12-10-2018 K04M3_46570 e6dab507ef79d65966fab27a2742f56e 156 SUPERFAMILY SSF88697 2 155 1.49E-52 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_44260 766dbc6ff40d667956e10d7db67b7c04 369 Gene3D G3DSA:1.20.1720.10 1 361 5.9E-73 T 12-10-2018 K04M3_44260 766dbc6ff40d667956e10d7db67b7c04 369 Pfam PF07690 Major Facilitator Superfamily 10 333 1.2E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_44260 766dbc6ff40d667956e10d7db67b7c04 369 SUPERFAMILY SSF103473 3 359 3.66E-52 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_35930 f04ce3f1c9ea9badb4048cd5d4c282a3 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 8.3E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_35930 f04ce3f1c9ea9badb4048cd5d4c282a3 296 SUPERFAMILY SSF161098 10 296 1.5E-69 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35930 f04ce3f1c9ea9badb4048cd5d4c282a3 296 Gene3D G3DSA:1.10.3720.10 1 283 4.4E-74 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_23790 dc5a033a297ee8a24dadca84355aeff1 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 2.7E-40 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 K04M3_38120 7c7a5f3a9d4478d1fc2175d31056e19c 399 SUPERFAMILY SSF52540 3 321 1.86E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_38120 7c7a5f3a9d4478d1fc2175d31056e19c 399 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 257 374 6.0E-27 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal K04M3_38120 7c7a5f3a9d4478d1fc2175d31056e19c 399 SMART SM00833 257 374 1.6E-46 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal K04M3_38120 7c7a5f3a9d4478d1fc2175d31056e19c 399 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 1.0E-56 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain K04M3_38120 7c7a5f3a9d4478d1fc2175d31056e19c 399 Gene3D G3DSA:3.40.50.300 3 230 1.6E-71 T 12-10-2018 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 Gene3D G3DSA:1.10.10.10 1 83 2.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 Gene3D G3DSA:3.40.190.10 115 270 3.0E-27 T 12-10-2018 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 2.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 SUPERFAMILY SSF53850 115 272 3.98E-28 T 12-10-2018 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 Pfam PF03466 LysR substrate binding domain 115 274 2.8E-14 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 Gene3D G3DSA:3.40.190.10 148 246 3.0E-27 T 12-10-2018 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_43160 da0cbd5c21de8a7439c474de2d53ce99 285 SUPERFAMILY SSF46785 1 81 1.24E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_36310 55461b9d4762c191382f04f67035e0e4 419 Pfam PF07005 Putative sugar-binding N-terminal domain 4 228 2.5E-68 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain K04M3_36310 55461b9d4762c191382f04f67035e0e4 419 Gene3D G3DSA:3.40.50.10840 3 236 9.2E-87 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily K04M3_36310 55461b9d4762c191382f04f67035e0e4 419 SUPERFAMILY SSF142764 4 418 8.37E-131 T 12-10-2018 K04M3_36310 55461b9d4762c191382f04f67035e0e4 419 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 255 411 1.9E-40 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain K04M3_36310 55461b9d4762c191382f04f67035e0e4 419 Gene3D G3DSA:3.40.980.20 243 419 2.8E-63 T 12-10-2018 K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 Pfam PF02311 AraC-like ligand binding domain 19 94 9.8E-6 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 SUPERFAMILY SSF46689 207 254 7.89E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 SUPERFAMILY SSF51182 29 80 9.29E-8 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 Gene3D G3DSA:2.60.120.10 5 85 2.5E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 Gene3D G3DSA:1.10.10.60 154 256 1.5E-20 T 12-10-2018 K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 SMART SM00342 171 253 1.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 Pfam PF12833 Helix-turn-helix domain 177 254 8.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_44250 4824337631e8b8cbcaf0bf62da5a6dc2 257 SUPERFAMILY SSF46689 154 206 2.79E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 Pfam PF03466 LysR substrate binding domain 87 289 3.6E-32 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 SUPERFAMILY SSF53850 87 290 1.03E-27 T 12-10-2018 K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:1.10.10.10 1 90 6.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 SUPERFAMILY SSF46785 1 87 5.89E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:3.40.190.10 165 265 3.5E-26 T 12-10-2018 K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00290 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:3.40.190.10 91 287 3.5E-26 T 12-10-2018 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 Gene3D G3DSA:3.40.50.300 468 716 1.6E-72 T 12-10-2018 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 14 706 1.1E-241 T 12-10-2018 IPR017750 ATPase, type I secretion system K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 Gene3D G3DSA:3.90.70.10 9 133 2.0E-13 T 12-10-2018 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 ProSitePatterns PS00211 ABC transporters family signature. 615 629 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 SUPERFAMILY SSF90123 151 461 1.44E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 Pfam PF00005 ABC transporter 494 643 6.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 SMART SM00382 503 688 1.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 SUPERFAMILY SSF52540 468 704 5.89E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 Pfam PF00664 ABC transporter transmembrane region 167 425 8.0E-11 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_14800 6d5ad36ab39ac96ee53710e13a57de54 723 Gene3D G3DSA:1.20.1560.10 151 463 6.8E-46 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_32690 173c289d981587053197b0811042d062 235 Gene3D G3DSA:3.40.605.10 31 199 2.8E-9 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_32690 173c289d981587053197b0811042d062 235 SUPERFAMILY SSF53720 9 180 4.19E-12 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_42090 3fe010c975f1fc52f623cfa7bb87c3f0 156 PIRSF PIRSF003174 1 155 4.2E-48 T 12-10-2018 IPR010292 Uncharacterised protein family CreA K04M3_42090 3fe010c975f1fc52f623cfa7bb87c3f0 156 Pfam PF05981 CreA protein 24 144 1.4E-42 T 12-10-2018 IPR010292 Uncharacterised protein family CreA K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 SMART SM00870 29 348 6.7E-149 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 PIRSF PIRSF001220 24 354 8.4E-97 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 Gene3D G3DSA:3.40.50.1170 25 240 5.8E-86 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 3.7E-24 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 3.7E-24 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 3.7E-24 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 15 354 2.3E-161 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 Gene3D G3DSA:3.40.50.40 241 354 1.3E-42 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 SUPERFAMILY SSF53774 27 352 1.83E-108 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 Pfam PF00710 Asparaginase, N-terminal 29 222 2.5E-61 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 PIRSF PIRSF500176 26 354 1.3E-83 T 12-10-2018 K04M3_46290 14a60693a9e66c27af060dcb990c7ad1 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.40.50.720 3 353 7.3E-137 T 12-10-2018 K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 SMART SM01002 149 297 3.4E-87 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.0E-155 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF51735 137 303 3.58E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.8E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 PIRSF PIRSF000183 1 371 1.1E-156 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.4E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF52283 1 360 3.4E-67 T 12-10-2018 K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.40.50.720 130 305 7.3E-137 T 12-10-2018 K04M3_10790 8e8923096c87b50371a68da5b59870a6 374 SMART SM01003 4 137 2.6E-79 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal K04M3_22380 bec06c1d278932cc2d12c63b18bba5bc 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 K04M3_22380 bec06c1d278932cc2d12c63b18bba5bc 207 Pfam PF03458 UPF0126 domain 92 163 3.7E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Gene3D G3DSA:1.10.3170.10 173 365 2.5E-159 T 12-10-2018 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Gene3D G3DSA:3.90.320.10 919 1217 2.1E-102 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Gene3D G3DSA:3.40.50.300 25 452 2.5E-159 T 12-10-2018 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 SUPERFAMILY SSF52980 928 1211 6.97E-87 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 452 3.5E-59 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 459 842 4.0E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 SUPERFAMILY SSF52540 31 870 3.66E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Gene3D G3DSA:1.10.486.10 602 756 1.5E-155 T 12-10-2018 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 985 1196 4.4E-7 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Gene3D G3DSA:3.40.50.300 461 873 1.5E-155 T 12-10-2018 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 23 1210 22.963 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 K04M3_24930 b2f88b12dd95be1ca20e1722342a37f5 1227 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 25 1209 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 K04M3_43710 0887420b080058e8d327f8293b204e3d 199 SUPERFAMILY SSF48498 87 192 8.12E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_43710 0887420b080058e8d327f8293b204e3d 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 1.6E-32 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal K04M3_43710 0887420b080058e8d327f8293b204e3d 199 Gene3D G3DSA:1.10.357.10 5 196 1.9E-45 T 12-10-2018 K04M3_43710 0887420b080058e8d327f8293b204e3d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_43710 0887420b080058e8d327f8293b204e3d 199 SUPERFAMILY SSF46689 4 80 9.23E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_43710 0887420b080058e8d327f8293b204e3d 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 97.116 T 12-10-2018 IPR017757 Transcriptional repressor BetI K04M3_43710 0887420b080058e8d327f8293b204e3d 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 9.6E-76 T 12-10-2018 IPR017757 Transcriptional repressor BetI K04M3_43710 0887420b080058e8d327f8293b204e3d 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site K04M3_23890 cf51023bb0b1316d45d32188d41b9a82 150 Pfam PF07977 FabA-like domain 17 141 6.9E-40 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_23890 cf51023bb0b1316d45d32188d41b9a82 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.2E-60 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_23890 cf51023bb0b1316d45d32188d41b9a82 150 Gene3D G3DSA:3.10.129.10 2 150 8.7E-62 T 12-10-2018 K04M3_23890 cf51023bb0b1316d45d32188d41b9a82 150 SUPERFAMILY SSF54637 7 146 1.42E-49 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_23890 cf51023bb0b1316d45d32188d41b9a82 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.701 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 Gene3D G3DSA:1.10.10.10 4 89 3.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 Gene3D G3DSA:3.40.190.10 164 262 2.0E-56 T 12-10-2018 K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 SUPERFAMILY SSF53850 91 291 2.48E-38 T 12-10-2018 K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 Pfam PF03466 LysR substrate binding domain 90 290 4.4E-39 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 Gene3D G3DSA:3.40.190.10 92 287 2.0E-56 T 12-10-2018 K04M3_16730 0c5cdbcb8f081719bad2133eab44c70e 294 SUPERFAMILY SSF46785 5 112 1.57E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46880 f9b542cf583a9ab0a1648141b1f42ade 159 Gene3D G3DSA:3.30.1060.10 1 158 1.3E-41 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_46880 f9b542cf583a9ab0a1648141b1f42ade 159 SUPERFAMILY SSF55068 1 148 1.44E-49 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_46880 f9b542cf583a9ab0a1648141b1f42ade 159 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 1.2E-43 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_46880 f9b542cf583a9ab0a1648141b1f42ade 159 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 26.65 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 365 5.6E-27 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 Gene3D G3DSA:3.90.190.10 88 234 2.1E-26 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 Gene3D G3DSA:3.40.50.10330 237 365 6.8E-28 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 SUPERFAMILY SSF52799 84 227 3.67E-28 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 SMART SM00195 90 232 5.8E-14 T 12-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 SMART SM00046 240 363 2.4E-4 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 SMART SM00404 135 231 4.3E-4 T 12-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 Gene3D G3DSA:2.60.200.40 366 538 2.7E-27 T 12-10-2018 K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 SUPERFAMILY SSF111331 242 547 2.75E-52 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily K04M3_00750 dc424250a22ec090c8dcf92b0a74527c 554 Pfam PF00782 Dual specificity phosphatase, catalytic domain 99 228 4.0E-17 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Gene3D G3DSA:3.40.350.10 152 302 2.2E-36 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 SUPERFAMILY SSF55920 308 562 7.07E-50 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 9.4E-21 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 SUPERFAMILY SSF53092 14 141 9.24E-12 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Pfam PF00557 Metallopeptidase family M24 323 526 1.0E-41 T 12-10-2018 IPR000994 Peptidase M24 K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 137 3.6E-17 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Gene3D G3DSA:3.90.230.10 305 596 2.8E-92 T 12-10-2018 K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 2.0E-40 T 12-10-2018 K04M3_13360 79f9459a0de0125d34b30ee37b272d74 598 Gene3D G3DSA:3.40.350.10 1 151 1.3E-42 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal K04M3_33080 0f9ce83eab3c248e367b79de8ae0f536 236 SUPERFAMILY SSF52540 5 219 1.23E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_33080 0f9ce83eab3c248e367b79de8ae0f536 236 SMART SM00382 34 221 2.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_33080 0f9ce83eab3c248e367b79de8ae0f536 236 Gene3D G3DSA:3.40.50.300 3 233 3.9E-58 T 12-10-2018 K04M3_33080 0f9ce83eab3c248e367b79de8ae0f536 236 Pfam PF00005 ABC transporter 25 170 5.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_33080 0f9ce83eab3c248e367b79de8ae0f536 236 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 Gene3D G3DSA:2.40.50.100 67 298 6.8E-20 T 12-10-2018 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 Pfam PF13437 HlyD family secretion protein 264 388 1.0E-16 T 12-10-2018 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 Pfam PF02321 Outer membrane efflux protein 113 224 8.4E-5 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 SUPERFAMILY SSF51230 259 293 4.71E-5 T 12-10-2018 IPR011053 Single hybrid motif K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 Gene3D G3DSA:1.10.287.470 101 263 6.8E-20 T 12-10-2018 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 6.7E-24 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 6.7E-24 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 6.7E-24 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 6.7E-24 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_23210 2c044a4d6acc419fbc4615cd9a0d570e 418 Gene3D G3DSA:2.40.30.170 55 398 6.8E-20 T 12-10-2018 K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 8.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 8.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 8.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.4E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 SUPERFAMILY SSF51735 3 235 6.27E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 Pfam PF00106 short chain dehydrogenase 3 191 2.8E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_47740 52fe32ca39efe2e109e0660a3b360646 235 Gene3D G3DSA:3.40.50.720 3 235 1.2E-49 T 12-10-2018 K04M3_34080 75fb03c7bee515197b81a121827fd661 72 Gene3D G3DSA:1.10.720.30 14 71 5.4E-30 T 12-10-2018 IPR036361 SAP domain superfamily K04M3_34080 75fb03c7bee515197b81a121827fd661 72 Pfam PF09905 DNA-binding protein VF530 6 68 1.1E-34 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 K04M3_26490 4ab2decbc77391936a3e5def56f157fa 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.276 T 12-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 K04M3_26490 4ab2decbc77391936a3e5def56f157fa 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.8E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 K04M3_26490 4ab2decbc77391936a3e5def56f157fa 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.3E-20 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 K04M3_14160 940762f65fccaca0d5c45c23c684d773 363 SUPERFAMILY SSF56935 26 363 3.26E-23 T 12-10-2018 K04M3_14160 940762f65fccaca0d5c45c23c684d773 363 Gene3D G3DSA:2.40.160.10 108 363 1.2E-7 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_02510 c2ee361dbb77863b05d780b6eb9177fb 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 10 171 7.5E-58 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 K04M3_02510 c2ee361dbb77863b05d780b6eb9177fb 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 10 171 2.3E-54 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 SMART SM00493 266 337 3.6E-18 T 12-10-2018 IPR006171 TOPRIM domain K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 SUPERFAMILY SSF117023 455 586 1.44E-44 T 12-10-2018 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Gene3D G3DSA:3.90.580.10 1 102 1.2E-39 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Gene3D G3DSA:1.20.50.20 375 433 1.5E-23 T 12-10-2018 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Pfam PF08278 DNA primase DnaG DnaB-binding 459 582 8.0E-36 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Pfam PF10410 DnaB-helicase binding domain of primase 376 428 1.3E-9 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 SUPERFAMILY SSF57783 4 101 4.76E-38 T 12-10-2018 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 SMART SM00766 458 583 1.7E-57 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Gene3D G3DSA:3.40.1360.10 248 374 7.6E-43 T 12-10-2018 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Gene3D G3DSA:3.90.980.10 122 247 5.0E-46 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 SMART SM00400 36 90 1.8E-37 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Pfam PF13155 Toprim-like 270 357 7.9E-14 T 12-10-2018 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 7.0E-42 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Hamap MF_00974 DNA primase [dnaG]. 4 584 29.776 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 PIRSF PIRSF002811 2 587 4.9E-146 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Gene3D G3DSA:1.10.860.10 446 588 5.7E-58 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 SUPERFAMILY SSF56731 123 434 9.59E-115 T 12-10-2018 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 Pfam PF01807 CHC2 zinc finger 6 101 1.9E-41 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 K04M3_03760 ebb87cd1f31ca47f62196081560e99e6 588 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 2.6E-148 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 K04M3_45230 ca86acf0bca4e348c429609135a259f8 207 SUPERFAMILY SSF53335 41 160 3.26E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_45230 ca86acf0bca4e348c429609135a259f8 207 Pfam PF13649 Methyltransferase domain 54 148 3.5E-11 T 12-10-2018 K04M3_45230 ca86acf0bca4e348c429609135a259f8 207 Gene3D G3DSA:3.40.50.150 11 198 1.9E-17 T 12-10-2018 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 Pfam PF03466 LysR substrate binding domain 88 293 7.2E-30 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 Gene3D G3DSA:3.40.190.10 93 292 1.9E-49 T 12-10-2018 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 SUPERFAMILY SSF46785 5 88 1.6E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 Gene3D G3DSA:1.10.10.10 4 92 6.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 SUPERFAMILY SSF53850 88 300 2.57E-35 T 12-10-2018 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16890 ab0a63c7102902d6a1a201ab09907f16 307 Gene3D G3DSA:3.40.190.10 163 268 1.9E-49 T 12-10-2018 K04M3_11410 f42e2cf6199c88bf86643a4d299a5f7f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 3.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_11410 f42e2cf6199c88bf86643a4d299a5f7f 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.1E-13 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain K04M3_11410 f42e2cf6199c88bf86643a4d299a5f7f 295 Gene3D G3DSA:1.10.3720.10 85 291 3.3E-17 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_11410 f42e2cf6199c88bf86643a4d299a5f7f 295 SUPERFAMILY SSF161098 89 276 1.96E-21 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_18210 856df5758cf738b760d3bd532a157189 138 Pfam PF07007 Lysozyme inhibitor LprI 25 117 5.8E-13 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal K04M3_18210 856df5758cf738b760d3bd532a157189 138 Gene3D G3DSA:1.20.1270.180 16 128 7.0E-13 T 12-10-2018 K04M3_02870 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02870 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02870 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 K04M3_02870 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 12-10-2018 K04M3_02870 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 K04M3_02870 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_02870 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 K04M3_02870 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 12-10-2018 K04M3_02870 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 K04M3_02870 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 Pfam PF04055 Radical SAM superfamily 91 251 4.4E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.1E-8 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 SMART SM00729 84 293 2.2E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 SUPERFAMILY SSF102114 52 315 3.92E-68 T 12-10-2018 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 PIRSF PIRSF005963 1 321 2.5E-129 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.346 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 Gene3D G3DSA:3.20.20.70 49 293 1.1E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_06920 2334983b96524dafb7fc48e2d6e6cd37 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 1.3E-149 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 SUPERFAMILY SSF52172 183 306 1.2E-25 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 SUPERFAMILY SSF50341 16 157 1.57E-35 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:2.30.30.40 23 147 2.9E-28 T 12-10-2018 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 SMART SM00260 17 153 3.8E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 Pfam PF00072 Response regulator receiver domain 184 302 1.4E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 PIRSF PIRSF002867 1 308 5.7E-103 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 SMART SM00448 182 302 5.0E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:3.40.50.2300 168 308 1.5E-25 T 12-10-2018 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:2.40.50.180 39 153 2.9E-28 T 12-10-2018 K04M3_07660 9e46e3b512d245501fe0abf0182c1701 308 Pfam PF01584 CheW-like domain 21 155 5.6E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 SMART SM00028 658 691 160.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 SMART SM00028 624 657 3.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 SMART SM00028 590 623 8.6E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 SUPERFAMILY SSF48695 42 581 8.71E-77 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 SUPERFAMILY SSF48452 583 705 7.97E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 Pfam PF13414 TPR repeat 598 635 2.5E-7 T 12-10-2018 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 Gene3D G3DSA:1.25.40.10 571 750 2.9E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 Gene3D G3DSA:1.10.1130.10 155 379 9.6E-19 T 12-10-2018 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 Pfam PF13435 Cytochrome c554 and c-prime 47 73 0.0019 T 12-10-2018 IPR023155 Cytochrome c-552/4 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 Pfam PF13435 Cytochrome c554 and c-prime 180 218 7.6E-4 T 12-10-2018 IPR023155 Cytochrome c-552/4 K04M3_14720 834d63da8feda7c89868b6c7a5b6a165 776 Pfam PF13432 Tetratricopeptide repeat 662 704 3.0E-4 T 12-10-2018 K04M3_16650 99f30efb6c4abd13e1a21cec8e1397c8 204 SUPERFAMILY SSF103088 55 182 1.1E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_16650 99f30efb6c4abd13e1a21cec8e1397c8 204 Pfam PF00691 OmpA family 83 178 1.1E-17 T 12-10-2018 IPR006665 OmpA-like domain K04M3_16650 99f30efb6c4abd13e1a21cec8e1397c8 204 PRINTS PR01021 OMPA domain signature 114 129 5.9E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_16650 99f30efb6c4abd13e1a21cec8e1397c8 204 PRINTS PR01021 OMPA domain signature 84 106 5.9E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_16650 99f30efb6c4abd13e1a21cec8e1397c8 204 PRINTS PR01021 OMPA domain signature 129 145 5.9E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_16650 99f30efb6c4abd13e1a21cec8e1397c8 204 Gene3D G3DSA:3.30.1330.60 54 188 5.9E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_09180 2b19f4b1f0da04a40deb7a62d6123176 183 Gene3D G3DSA:1.20.1540.10 1 181 1.5E-20 T 12-10-2018 IPR035952 Rhomboid-like superfamily K04M3_09180 2b19f4b1f0da04a40deb7a62d6123176 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 172 4.4E-48 T 12-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria K04M3_09180 2b19f4b1f0da04a40deb7a62d6123176 183 SUPERFAMILY SSF144091 4 176 1.31E-28 T 12-10-2018 K04M3_09180 2b19f4b1f0da04a40deb7a62d6123176 183 Pfam PF01694 Rhomboid family 34 173 8.8E-14 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 SUPERFAMILY SSF53720 2 449 1.17E-123 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 Gene3D G3DSA:3.40.605.10 7 448 1.7E-141 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 Gene3D G3DSA:3.40.309.10 247 436 1.7E-141 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.564 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 2.8E-229 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 K04M3_29330 a86fbd409dfb6023b8447b2143cf710c 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 1.0E-121 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_17510 1769b9c9b82c5c6ffedae57486c34667 67 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 62 5.6E-12 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 K04M3_17510 1769b9c9b82c5c6ffedae57486c34667 67 Gene3D G3DSA:1.20.5.420 1 66 6.1E-8 T 12-10-2018 K04M3_17510 1769b9c9b82c5c6ffedae57486c34667 67 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 2.2E-11 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 SUPERFAMILY SSF55073 209 362 5.41E-17 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 SMART SM00065 14 161 1.9E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 Gene3D G3DSA:3.30.450.40 12 166 1.7E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 SUPERFAMILY SSF141868 378 626 4.05E-84 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 Gene3D G3DSA:3.20.20.450 372 630 7.6E-89 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 Pfam PF13185 GAF domain 52 143 1.6E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 Pfam PF00563 EAL domain 381 613 1.3E-70 T 12-10-2018 IPR001633 EAL domain K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 2.5E-13 T 12-10-2018 IPR000160 GGDEF domain K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 358 2.0E-11 T 12-10-2018 IPR000160 GGDEF domain K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 SMART SM00267 192 364 4.5E-9 T 12-10-2018 IPR000160 GGDEF domain K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 SUPERFAMILY SSF55781 17 164 1.84E-20 T 12-10-2018 K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 Gene3D G3DSA:3.30.70.270 189 360 2.5E-17 T 12-10-2018 K04M3_41740 0b08c49200827ab78f5f8b398baf5052 637 SMART SM00052 373 618 4.1E-97 T 12-10-2018 IPR001633 EAL domain K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 SUPERFAMILY SSF56601 1 275 1.09E-82 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 Gene3D G3DSA:3.40.710.10 18 273 9.6E-89 T 12-10-2018 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 Gene3D G3DSA:2.60.410.10 275 365 6.6E-27 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 SUPERFAMILY SSF69189 275 367 5.1E-23 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 365 4.3E-22 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 254 3.0E-85 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 SMART SM00936 275 365 6.5E-28 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.3E-19 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.3E-19 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_34020 ec0b64e8692e641e2dc99e18788ac88b 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.3E-19 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_32300 d479ef4bbd615133259554a2a6386701 129 Pfam PF03899 ATP synthase I chain 15 111 7.8E-21 T 12-10-2018 IPR005598 ATP synthase protein I K04M3_17240 eca64f9cc67183655c837f38916ad744 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 5.4E-45 T 12-10-2018 IPR012672 Type III secretion system YscX K04M3_17240 eca64f9cc67183655c837f38916ad744 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 8.5E-50 T 12-10-2018 IPR012672 Type III secretion system YscX K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 12-10-2018 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12390 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 12-10-2018 K04M3_02280 194b4cb890127f423cb6721ee7e0b522 206 Gene3D G3DSA:1.10.10.10 2 85 2.5E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_02280 194b4cb890127f423cb6721ee7e0b522 206 SUPERFAMILY SSF46785 5 183 8.57E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_02280 194b4cb890127f423cb6721ee7e0b522 206 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.0E-7 T 12-10-2018 K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 1.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 16 207 8.6E-81 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 Gene3D G3DSA:3.10.610.10 47 160 2.8E-36 T 12-10-2018 K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 Gene3D G3DSA:2.10.70.20 162 210 3.5E-17 T 12-10-2018 K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 Pfam PF11612 Type II secretion system (T2SS), protein J 68 205 1.5E-40 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 SUPERFAMILY SSF54523 51 213 8.24E-58 T 12-10-2018 K04M3_01250 bd7de1e33732b55e2583cdee3125b594 225 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 3.7E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Gene3D G3DSA:3.40.50.300 216 381 4.5E-102 T 12-10-2018 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 SUPERFAMILY SSF116878 120 453 5.1E-52 T 12-10-2018 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Pfam PF12631 MnmE helical domain 122 450 1.2E-60 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Gene3D G3DSA:1.20.120.430 121 453 4.5E-102 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 SUPERFAMILY SSF52540 70 371 1.96E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.791 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.4E-35 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 7.1E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 Gene3D G3DSA:3.30.1360.120 1 120 6.8E-39 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 K04M3_32360 a0cb9eb43955e91b403a461791a06045 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.1E-99 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 7.4E-9 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 7.4E-9 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.4E-9 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 Pfam PF03486 HI0933-like protein 5 395 9.5E-158 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 5.0E-5 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.0E-5 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.0E-5 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 Gene3D G3DSA:2.40.30.10 191 342 5.8E-132 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 SUPERFAMILY SSF160996 193 341 1.28E-42 T 12-10-2018 K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 Gene3D G3DSA:3.50.50.60 8 391 5.8E-132 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 Gene3D G3DSA:1.10.8.260 265 325 5.8E-132 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 2.9E-130 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like K04M3_00690 c5b411162a20b280c1dfd9dbca85b8be 397 SUPERFAMILY SSF51905 1 397 3.4E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 7.6E-243 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 SUPERFAMILY SSF52540 331 580 1.02E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 Gene3D G3DSA:3.40.50.300 329 581 2.6E-96 T 12-10-2018 K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 Pfam PF00005 ABC transporter 359 509 2.3E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 Gene3D G3DSA:1.20.1560.10 2 328 5.3E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 SMART SM00382 368 555 1.1E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 SUPERFAMILY SSF90123 14 327 3.92E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_09740 d236d874f3996b71cb1d6f387d153333 582 Pfam PF00664 ABC transporter transmembrane region 28 293 5.4E-57 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 SUPERFAMILY SSF46894 132 234 1.47E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 Gene3D G3DSA:1.10.10.10 130 239 1.7E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-40 T 12-10-2018 K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 SMART SM00448 5 116 3.8E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.0E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_01400 ba7e60a4d2227af29616cee2b108aaf7 239 SMART SM00862 156 232 1.9E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_27290 2dcc2af71ca35e8be66c83ef9f022e77 185 Pfam PF02325 YGGT family 109 173 7.1E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 K04M3_27290 2dcc2af71ca35e8be66c83ef9f022e77 185 Pfam PF02325 YGGT family 10 78 2.2E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 K04M3_22230 4bbba57d18a0f741f18cbd0c9604dced 291 SUPERFAMILY SSF53850 89 287 4.62E-38 T 12-10-2018 K04M3_22230 4bbba57d18a0f741f18cbd0c9604dced 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_22230 4bbba57d18a0f741f18cbd0c9604dced 291 Pfam PF03466 LysR substrate binding domain 88 286 1.2E-40 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_22230 4bbba57d18a0f741f18cbd0c9604dced 291 Gene3D G3DSA:3.40.190.290 90 290 3.8E-73 T 12-10-2018 K04M3_22230 4bbba57d18a0f741f18cbd0c9604dced 291 SUPERFAMILY SSF46785 1 84 6.01E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_22230 4bbba57d18a0f741f18cbd0c9604dced 291 Gene3D G3DSA:1.10.10.10 1 89 9.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_11600 16f7216e147a678a743694356c67e2dd 553 SUPERFAMILY SSF56821 1 551 3.27E-195 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 Gene3D G3DSA:1.20.1270.20 1 143 1.3E-37 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 Gene3D G3DSA:3.40.50.2030 237 382 3.5E-63 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 Gene3D G3DSA:1.20.1270.20 153 235 1.4E-28 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 1.8E-162 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 Gene3D G3DSA:3.40.50.2030 383 551 6.0E-61 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 2.0E-225 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 PIRSF PIRSF000076 1 553 2.6E-243 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_11600 16f7216e147a678a743694356c67e2dd 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.162 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 K04M3_40430 d59c88cf7adda69f68e35251271654aa 227 Pfam PF05618 Putative ATP-dependant zinc protease 87 221 1.1E-43 T 12-10-2018 K04M3_40430 d59c88cf7adda69f68e35251271654aa 227 SUPERFAMILY SSF50630 87 218 5.25E-43 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_40430 d59c88cf7adda69f68e35251271654aa 227 Gene3D G3DSA:2.40.70.10 85 211 6.1E-41 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_03830 25e6a45aa86c807cf87f877eb2b7162d 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 1.9E-29 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_03830 25e6a45aa86c807cf87f877eb2b7162d 160 Gene3D G3DSA:3.30.70.560 1 153 9.2E-34 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_03830 25e6a45aa86c807cf87f877eb2b7162d 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 3.7E-25 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_03830 25e6a45aa86c807cf87f877eb2b7162d 160 SUPERFAMILY SSF55083 1 148 5.75E-38 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_27660 ec09db16f86b0a4c62f70b53133f5f8a 104 SUPERFAMILY SSF46973 1 99 8.76E-35 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 K04M3_27660 ec09db16f86b0a4c62f70b53133f5f8a 104 PIRSF PIRSF000699 1 104 1.0E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 K04M3_27660 ec09db16f86b0a4c62f70b53133f5f8a 104 Gene3D G3DSA:1.20.58.280 2 103 2.8E-35 T 12-10-2018 K04M3_27660 ec09db16f86b0a4c62f70b53133f5f8a 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 98 8.2E-34 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 K04M3_35620 0a03dcc2b335f9a5550860100714299b 473 Pfam PF00171 Aldehyde dehydrogenase family 12 468 7.5E-148 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_35620 0a03dcc2b335f9a5550860100714299b 473 Gene3D G3DSA:3.40.309.10 251 438 6.6E-152 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_35620 0a03dcc2b335f9a5550860100714299b 473 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_35620 0a03dcc2b335f9a5550860100714299b 473 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_35620 0a03dcc2b335f9a5550860100714299b 473 Gene3D G3DSA:3.40.605.10 8 466 6.6E-152 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_35620 0a03dcc2b335f9a5550860100714299b 473 SUPERFAMILY SSF53720 2 471 8.64E-141 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_33180 9a4c0b0fa06a108a7ab0f7e6e9982c32 401 Pfam PF07690 Major Facilitator Superfamily 8 265 4.7E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_33180 9a4c0b0fa06a108a7ab0f7e6e9982c32 401 Pfam PF07690 Major Facilitator Superfamily 274 384 9.0E-9 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_33180 9a4c0b0fa06a108a7ab0f7e6e9982c32 401 SUPERFAMILY SSF103473 5 386 2.62E-43 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_33180 9a4c0b0fa06a108a7ab0f7e6e9982c32 401 Gene3D G3DSA:1.20.1250.20 2 386 3.1E-39 T 12-10-2018 K04M3_38130 33b3b7596b55105024bd80dcdd339d0e 141 SUPERFAMILY SSF109635 7 100 5.62E-23 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily K04M3_38130 33b3b7596b55105024bd80dcdd339d0e 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 126 5.0E-7 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 K04M3_38130 33b3b7596b55105024bd80dcdd339d0e 141 SUPERFAMILY SSF57716 101 139 5.99E-6 T 12-10-2018 K04M3_38130 33b3b7596b55105024bd80dcdd339d0e 141 Gene3D G3DSA:1.20.120.910 7 141 3.0E-32 T 12-10-2018 K04M3_39480 6b2e0e9a184b9243d96f79ccf1204d24 109 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 98 2.9E-9 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core K04M3_39480 6b2e0e9a184b9243d96f79ccf1204d24 109 PIRSF PIRSF006639 8 109 2.7E-20 T 12-10-2018 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 K04M3_39480 6b2e0e9a184b9243d96f79ccf1204d24 109 SUPERFAMILY SSF101386 9 97 4.74E-15 T 12-10-2018 K04M3_39480 6b2e0e9a184b9243d96f79ccf1204d24 109 Gene3D G3DSA:1.10.287.1080 9 103 1.1E-13 T 12-10-2018 K04M3_35180 f3c9b545f9965e1c2a28f4d823dda948 236 SUPERFAMILY SSF53167 3 234 9.56E-92 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 K04M3_35180 f3c9b545f9965e1c2a28f4d823dda948 236 Pfam PF01048 Phosphorylase superfamily 17 222 2.1E-34 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 K04M3_35180 f3c9b545f9965e1c2a28f4d823dda948 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 5.7E-113 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 K04M3_35180 f3c9b545f9965e1c2a28f4d823dda948 236 Gene3D G3DSA:3.40.50.1580 1 236 8.0E-76 T 12-10-2018 K04M3_35180 f3c9b545f9965e1c2a28f4d823dda948 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.853 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 Pfam PF00563 EAL domain 408 637 1.6E-50 T 12-10-2018 IPR001633 EAL domain K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 SMART SM00052 397 640 6.5E-15 T 12-10-2018 IPR001633 EAL domain K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 Gene3D G3DSA:3.20.20.450 397 641 4.3E-37 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 Gene3D G3DSA:3.30.70.270 211 387 8.7E-23 T 12-10-2018 K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 SUPERFAMILY SSF55073 233 386 1.1E-18 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 SUPERFAMILY SSF141868 409 638 3.01E-37 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 SMART SM00267 216 386 4.5E-8 T 12-10-2018 IPR000160 GGDEF domain K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 3.2E-28 T 12-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 1.1E-19 T 12-10-2018 IPR000160 GGDEF domain K04M3_28390 dd53832a9b2e9053b55e306e78e84ec3 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 3.4E-10 T 12-10-2018 IPR000160 GGDEF domain K04M3_21760 09b1a36e61a32eaa765afb42968179e1 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 4.8E-62 T 12-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) K04M3_51970 fdc5b12ace64b4d0a1f106501b54b692 375 Pfam PF13455 Meiotically up-regulated gene 113 207 277 3.1E-5 T 12-10-2018 K04M3_51970 fdc5b12ace64b4d0a1f106501b54b692 375 SMART SM00974 201 282 0.0024 T 12-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding K04M3_46630 bcf8a298c44cd069e847e83df02fab5e 334 SUPERFAMILY SSF52540 1 333 1.15E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46630 bcf8a298c44cd069e847e83df02fab5e 334 Gene3D G3DSA:3.40.50.300 128 333 1.4E-75 T 12-10-2018 K04M3_46630 bcf8a298c44cd069e847e83df02fab5e 334 Gene3D G3DSA:3.40.50.720 51 127 7.3E-18 T 12-10-2018 K04M3_46630 bcf8a298c44cd069e847e83df02fab5e 334 PIRSF PIRSF026760 3 334 1.2E-106 T 12-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 K04M3_46630 bcf8a298c44cd069e847e83df02fab5e 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 3.3E-74 T 12-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop K04M3_46630 bcf8a298c44cd069e847e83df02fab5e 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 47 124 1.1E-20 T 12-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 SMART SM00487 9 427 2.2E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF52540 37 583 8.71E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF52540 5 416 7.43E-137 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:3.40.50.300 270 415 9.2E-51 T 12-10-2018 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 SUPERFAMILY SSF46600 625 672 2.75E-10 T 12-10-2018 IPR036876 UVR domain superfamily K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.1E-17 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.899 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:3.40.50.300 416 597 1.5E-50 T 12-10-2018 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 129 1.2E-8 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 1.1E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.9E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:3.40.50.300 1 233 5.0E-72 T 12-10-2018 K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 SMART SM00490 461 547 1.2E-19 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_21560 e166145b1d8b175e4e52d7aab06e6b13 676 Gene3D G3DSA:4.10.860.10 618 676 6.1E-19 T 12-10-2018 K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 SMART SM00382 385 572 1.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 Pfam PF00005 ABC transporter 376 524 1.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 SUPERFAMILY SSF90123 12 347 8.5E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 Pfam PF00664 ABC transporter transmembrane region 24 312 3.5E-30 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 SUPERFAMILY SSF52540 357 591 8.56E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 Gene3D G3DSA:1.20.1560.10 11 341 3.5E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_16390 67fdfda9ae61d07de7b4ee5481830e99 598 Gene3D G3DSA:3.40.50.300 353 597 6.4E-81 T 12-10-2018 K04M3_12710 3e8938ac7e4fcb6f29249acd63eaf589 84 Gene3D G3DSA:1.10.260.40 10 76 4.8E-6 T 12-10-2018 K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 Pfam PF02355 Protein export membrane protein 100 284 2.1E-53 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.563 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.2E-63 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 SUPERFAMILY SSF82866 81 283 5.23E-35 T 12-10-2018 K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 Pfam PF07549 SecD/SecF GG Motif 29 55 3.6E-9 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 274 2.3E-45 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_45180 8a0b5c7a28d7f36191142238dc95de04 300 Gene3D G3DSA:1.20.1640.10 96 290 2.1E-8 T 12-10-2018 K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 SMART SM00962 282 475 2.9E-63 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 Gene3D G3DSA:3.40.50.300 277 463 2.7E-57 T 12-10-2018 K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 SMART SM00382 281 434 7.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 SUPERFAMILY SSF52540 278 469 2.09E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 Gene3D G3DSA:1.20.120.1380 256 466 2.7E-57 T 12-10-2018 K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 136 370 7.4E-70 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 K04M3_22720 f0fe1f83e0aa7ea1dd5a0e081865c93a 495 Pfam PF00448 SRP54-type protein, GTPase domain 284 471 5.0E-38 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 Pfam PF09278 MerR, DNA binding 45 109 7.4E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 SMART SM00422 3 71 5.9E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 4.1E-67 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 SUPERFAMILY SSF46955 4 124 9.89E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 Gene3D G3DSA:1.10.1660.10 1 126 6.1E-34 T 12-10-2018 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.0E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.0E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_46600 07d83acd7c5ae93dc0deaa3387b7b515 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.0E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_37310 21454aa2dbf3d66d35c9f89e24fd7641 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 3.4E-100 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 K04M3_37310 21454aa2dbf3d66d35c9f89e24fd7641 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.511 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 K04M3_37310 21454aa2dbf3d66d35c9f89e24fd7641 299 Gene3D G3DSA:1.10.357.140 22 182 4.1E-23 T 12-10-2018 K04M3_37310 21454aa2dbf3d66d35c9f89e24fd7641 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site K04M3_37310 21454aa2dbf3d66d35c9f89e24fd7641 299 Pfam PF01040 UbiA prenyltransferase family 32 279 2.2E-65 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 K04M3_14020 4822dbae93b61d7ea0ab16ab0660a0fb 248 Gene3D G3DSA:3.40.50.880 4 248 2.1E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_14020 4822dbae93b61d7ea0ab16ab0660a0fb 248 Pfam PF07722 Peptidase C26 7 226 4.2E-69 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 K04M3_14020 4822dbae93b61d7ea0ab16ab0660a0fb 248 SUPERFAMILY SSF52317 5 245 3.0E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_13660 4822dbae93b61d7ea0ab16ab0660a0fb 248 Gene3D G3DSA:3.40.50.880 4 248 2.1E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_13660 4822dbae93b61d7ea0ab16ab0660a0fb 248 Pfam PF07722 Peptidase C26 7 226 4.2E-69 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 K04M3_13660 4822dbae93b61d7ea0ab16ab0660a0fb 248 SUPERFAMILY SSF52317 5 245 3.0E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Gene3D G3DSA:3.30.413.10 146 354 1.1E-81 T 12-10-2018 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 6.5E-284 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 SUPERFAMILY SSF55124 352 429 8.04E-21 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 562 1.6E-5 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 SUPERFAMILY SSF56014 435 567 3.27E-32 T 12-10-2018 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 9.6E-45 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 SUPERFAMILY SSF56014 154 350 1.96E-57 T 12-10-2018 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 SUPERFAMILY SSF55124 18 150 2.78E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 9.5E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.349 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Gene3D G3DSA:3.90.480.20 21 420 1.1E-81 T 12-10-2018 K04M3_28630 0ffbb4d67a89e79da89ffc92739904bf 578 Gene3D G3DSA:3.30.413.10 432 575 2.2E-35 T 12-10-2018 K04M3_23550 8e71efd521d117c28e0a53a05decfc7b 81 SUPERFAMILY SSF64307 4 73 1.44E-7 T 12-10-2018 IPR036868 TusA-like domain superfamily K04M3_23550 8e71efd521d117c28e0a53a05decfc7b 81 Pfam PF01206 Sulfurtransferase TusA 6 75 9.2E-9 T 12-10-2018 IPR001455 TusA-like domain K04M3_23550 8e71efd521d117c28e0a53a05decfc7b 81 Gene3D G3DSA:3.30.110.40 1 77 5.8E-6 T 12-10-2018 IPR036868 TusA-like domain superfamily K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.2E-144 T 12-10-2018 IPR005215 Trigger factor GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 PIRSF PIRSF003095 1 434 2.0E-127 T 12-10-2018 IPR005215 Trigger factor GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.2E-42 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.0E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 SUPERFAMILY SSF54534 90 241 1.96E-36 T 12-10-2018 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Gene3D G3DSA:3.30.70.1050 1 115 2.2E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Hamap MF_00303 Trigger factor [tig]. 1 418 22.024 T 12-10-2018 IPR005215 Trigger factor GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 SUPERFAMILY SSF102735 1 130 3.53E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Gene3D G3DSA:3.10.50.40 150 246 1.4E-107 T 12-10-2018 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.3E-40 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 SUPERFAMILY SSF109998 248 429 7.65E-49 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily K04M3_09110 7102f51e3e9d0a8df05c62589f5b0300 435 Gene3D G3DSA:1.10.3120.10 116 417 1.4E-107 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SUPERFAMILY SSF52172 935 1057 3.13E-37 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 606 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 581 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 625 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SMART SM00448 937 1054 3.5E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SMART SM00448 774 891 5.4E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Gene3D G3DSA:3.40.50.12330 929 994 3.4E-22 T 12-10-2018 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Gene3D G3DSA:3.40.50.12330 764 830 2.5E-20 T 12-10-2018 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SUPERFAMILY SSF47384 388 465 8.63E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Gene3D G3DSA:3.30.565.10 465 631 2.4E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SMART SM00388 400 465 4.2E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Pfam PF00072 Response regulator receiver domain 776 891 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Pfam PF00072 Response regulator receiver domain 939 1054 6.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Gene3D G3DSA:1.10.287.130 364 463 6.6E-29 T 12-10-2018 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SMART SM00387 512 628 2.8E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Gene3D G3DSA:3.40.50.2300 831 903 3.8E-20 T 12-10-2018 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Gene3D G3DSA:3.40.50.2300 995 1058 3.7E-21 T 12-10-2018 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 624 1.4E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SUPERFAMILY SSF55874 454 624 1.1E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 Pfam PF00512 His Kinase A (phospho-acceptor) domain 400 465 5.1E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_14180 cad3d72b39c944662629bcc5129cc450 1058 SUPERFAMILY SSF52172 774 899 1.15E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 3.8E-196 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 764 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 SUPERFAMILY SSF51998 7 763 1.46E-277 T 12-10-2018 K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 Gene3D G3DSA:3.20.70.20 5 765 0.0 T 12-10-2018 K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 PIRSF PIRSF000379 8 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 K04M3_21580 c2731dbba25cb07f935029fa30db6226 765 Pfam PF01228 Glycine radical 630 746 6.3E-42 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28770 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_06100 888d068d2a7e89884bc44b40f8800c8a 418 Gene3D G3DSA:3.30.9.10 134 362 1.4E-53 T 12-10-2018 K04M3_06100 888d068d2a7e89884bc44b40f8800c8a 418 Gene3D G3DSA:3.50.50.60 1 73 1.7E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_06100 888d068d2a7e89884bc44b40f8800c8a 418 SUPERFAMILY SSF51905 1 417 2.72E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_06100 888d068d2a7e89884bc44b40f8800c8a 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 5.2E-71 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_06100 888d068d2a7e89884bc44b40f8800c8a 418 SUPERFAMILY SSF54373 270 360 9.16E-18 T 12-10-2018 K04M3_06100 888d068d2a7e89884bc44b40f8800c8a 418 Gene3D G3DSA:3.50.50.60 93 404 1.4E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 12-10-2018 K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 K04M3_02860 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_44590 d217634cf01fb40787323588415c5cce 324 Pfam PF01551 Peptidase family M23 191 284 2.8E-30 T 12-10-2018 IPR016047 Peptidase M23 K04M3_44590 d217634cf01fb40787323588415c5cce 324 SUPERFAMILY SSF51261 57 289 1.31E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_44590 d217634cf01fb40787323588415c5cce 324 Gene3D G3DSA:2.70.70.10 162 288 3.2E-41 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_44590 d217634cf01fb40787323588415c5cce 324 Gene3D G3DSA:3.10.450.350 61 159 8.9E-7 T 12-10-2018 K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 SUPERFAMILY SSF53822 260 599 3.18E-69 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 Gene3D G3DSA:3.40.50.2300 261 596 9.5E-65 T 12-10-2018 K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 Gene3D G3DSA:1.25.40.650 149 254 4.4E-17 T 12-10-2018 K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 Gene3D G3DSA:1.25.40.10 23 146 1.8E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 Gene3D G3DSA:3.40.50.2300 369 597 9.5E-65 T 12-10-2018 K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 Pfam PF04348 LppC putative lipoprotein 40 599 1.5E-162 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA K04M3_04200 6a4412ffe6d5936f50036f1cd3b7ba2c 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 30.296 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.3E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-32 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 PIRSF PIRSF002134 1 118 2.5E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 SUPERFAMILY SSF46946 2 114 3.24E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.128 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02850 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:1.10.8.50 1 71 5.2E-28 T 12-10-2018 K04M3_07040 ccd0027e5d2a39b78fc1953049625f18 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 7.8E-48 T 12-10-2018 IPR009912 Zinc-ribbon containing domain K04M3_08390 49722a868832e21c0ea73e2b101e0422 114 PIRSF PIRSF000169 1 114 1.1E-37 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 K04M3_08390 49722a868832e21c0ea73e2b101e0422 114 SUPERFAMILY SSF81343 4 113 1.64E-25 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08390 49722a868832e21c0ea73e2b101e0422 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.0E-34 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 K04M3_08390 49722a868832e21c0ea73e2b101e0422 114 Gene3D G3DSA:1.20.1300.10 1 114 1.5E-27 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 Gene3D G3DSA:3.40.50.450 4 287 2.2E-116 T 12-10-2018 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.341 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 SUPERFAMILY SSF53784 3 310 8.5E-112 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.9E-129 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 PIRSF PIRSF000532 1 320 1.1E-126 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 Pfam PF00365 Phosphofructokinase 4 276 8.6E-109 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 K04M3_29970 d2b713a9df4650780950a9d017101d8b 320 Gene3D G3DSA:3.40.50.460 143 252 2.2E-116 T 12-10-2018 K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 542 560 7.6E-20 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 415 439 7.6E-20 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 450 460 7.6E-20 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 319 329 7.6E-20 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 PRINTS PR00811 Bacterial general secretion pathway protein D signature 565 579 7.6E-20 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 Pfam PF03958 Bacterial type II/III secretion system short domain 254 319 1.2E-12 T 12-10-2018 IPR005644 NolW-like K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 Gene3D G3DSA:3.30.1370.120 252 315 5.4E-12 T 12-10-2018 IPR038591 NolW-like superfamily K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 SMART SM00965 180 228 7.6E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 Pfam PF00263 Bacterial type II and III secretion system protein 419 577 3.0E-46 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 Gene3D G3DSA:2.60.40.3470 24 137 2.1E-14 T 12-10-2018 K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 523 556 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 Gene3D G3DSA:3.55.50.30 138 251 3.6E-36 T 12-10-2018 K04M3_28850 4bbe0d1de2d2d5d394bf8ec2fd0e607a 579 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 155 577 7.6E-164 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ K04M3_47060 bcbc5c57bafa030c82c5d72bcd1c1a0e 599 Pfam PF02254 TrkA-N domain 399 489 7.7E-8 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_47060 bcbc5c57bafa030c82c5d72bcd1c1a0e 599 SUPERFAMILY SSF51735 399 490 5.25E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_47060 bcbc5c57bafa030c82c5d72bcd1c1a0e 599 Pfam PF00999 Sodium/hydrogen exchanger family 16 386 2.2E-33 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_47060 bcbc5c57bafa030c82c5d72bcd1c1a0e 599 Gene3D G3DSA:1.20.1530.20 6 388 3.2E-14 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily K04M3_47060 bcbc5c57bafa030c82c5d72bcd1c1a0e 599 Gene3D G3DSA:3.40.50.720 397 508 8.6E-10 T 12-10-2018 K04M3_08100 64fb551ebf91bb79b7c56e3fe39d88d3 135 SUPERFAMILY SSF54631 7 126 1.77E-23 T 12-10-2018 K04M3_08100 64fb551ebf91bb79b7c56e3fe39d88d3 135 Gene3D G3DSA:3.10.580.10 2 134 3.5E-26 T 12-10-2018 K04M3_08100 64fb551ebf91bb79b7c56e3fe39d88d3 135 Pfam PF00571 CBS domain 78 125 5.9E-9 T 12-10-2018 IPR000644 CBS domain K04M3_08100 64fb551ebf91bb79b7c56e3fe39d88d3 135 SMART SM00116 83 130 5.0E-5 T 12-10-2018 IPR000644 CBS domain K04M3_08100 64fb551ebf91bb79b7c56e3fe39d88d3 135 SMART SM00116 16 65 11.0 T 12-10-2018 IPR000644 CBS domain K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 4.8E-27 T 12-10-2018 IPR018076 Type II secretion system F domain K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.8E-33 T 12-10-2018 IPR018076 Type II secretion system F domain K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 Gene3D G3DSA:1.20.81.30 58 174 3.2E-29 T 12-10-2018 K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 7.0E-19 T 12-10-2018 IPR003004 GspF/PilC family K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 7.0E-19 T 12-10-2018 IPR003004 GspF/PilC family K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 7.0E-19 T 12-10-2018 IPR003004 GspF/PilC family K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 7.0E-19 T 12-10-2018 IPR003004 GspF/PilC family K04M3_26290 0d7037177fa36d3fe2d910cd709fd96f 407 Gene3D G3DSA:1.20.81.30 259 370 9.8E-27 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.9E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.9E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.9E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 SUPERFAMILY SSF82866 289 490 6.02E-42 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 SUPERFAMILY SSF82714 184 263 2.09E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 SUPERFAMILY SSF82866 793 1027 4.05E-48 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:3.30.70.1440 657 857 7.1E-262 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:3.30.70.1430 567 656 7.1E-262 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:3.30.2090.10 179 270 7.1E-262 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 SUPERFAMILY SSF82693 41 133 2.88E-23 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 SUPERFAMILY SSF82693 142 325 2.46E-13 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 SUPERFAMILY SSF82714 711 793 7.06E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:3.30.2090.10 710 798 7.1E-262 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Pfam PF00873 AcrB/AcrD/AcrF family 6 1026 2.0E-176 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:3.30.70.1430 41 806 7.1E-262 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:1.20.1640.10 508 1023 7.1E-262 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:3.30.70.1320 135 325 7.1E-262 T 12-10-2018 K04M3_25800 36670f7fcc78f2858a6edd1059207e10 1034 Gene3D G3DSA:1.20.1640.10 13 507 7.1E-262 T 12-10-2018 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 Gene3D G3DSA:3.40.1450.10 78 310 2.3E-210 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.311 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.6E-80 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 9.6E-81 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 PIRSF PIRSF001492 1 510 2.6E-202 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.1E-228 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 SUPERFAMILY SSF53649 4 509 2.14E-75 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 SUPERFAMILY SSF64158 78 308 1.28E-80 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 K04M3_29750 5cfb08b0e2285d0247c8cc40e78ab156 510 Gene3D G3DSA:3.40.720.10 6 509 2.3E-210 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Gene3D G3DSA:3.40.1140.10 3 229 1.2E-97 T 12-10-2018 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Pfam PF04310 MukB N-terminal 4 229 5.0E-121 T 12-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 SUPERFAMILY SSF52540 28 226 1.22E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 3 1474 10.925 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Pfam PF16330 MukB hinge domain 649 813 1.4E-72 T 12-10-2018 IPR032520 MukB, hinge domain K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Gene3D G3DSA:1.20.58.850 623 833 3.5E-134 T 12-10-2018 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 SUPERFAMILY SSF52540 23 1436 1.73E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 PIRSF PIRSF005246 3 1489 0.0 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Gene3D G3DSA:1.20.1060.30 670 781 3.5E-134 T 12-10-2018 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1339 1427 1.0E-14 T 12-10-2018 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Gene3D G3DSA:3.40.1140.10 1385 1471 8.0E-39 T 12-10-2018 K04M3_10260 d631dec5857ac673bb4188a8a70615c4 1489 Gene3D G3DSA:1.20.58.850 585 855 3.5E-134 T 12-10-2018 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 SUPERFAMILY SSF51905 15 386 4.32E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_25180 f00ccd31feee60e377953b9b483af095 519 Gene3D G3DSA:1.10.8.870 404 475 2.2E-14 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 Gene3D G3DSA:3.50.50.60 17 378 1.1E-141 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_25180 f00ccd31feee60e377953b9b483af095 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 Gene3D G3DSA:3.30.9.10 94 332 1.1E-141 T 12-10-2018 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 9.2E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_25180 f00ccd31feee60e377953b9b483af095 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 501 1.8E-11 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 K04M3_19230 aafaccaac7cdca1758a5875b8f9cf4fd 126 SUPERFAMILY SSF74653 38 103 9.42E-6 T 12-10-2018 K04M3_19230 aafaccaac7cdca1758a5875b8f9cf4fd 126 Gene3D G3DSA:3.30.1150.10 26 126 4.9E-10 T 12-10-2018 K04M3_19230 aafaccaac7cdca1758a5875b8f9cf4fd 126 Pfam PF13103 TonB C terminal 39 103 5.1E-5 T 12-10-2018 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 SUPERFAMILY SSF52540 187 421 4.11E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 SMART SM00382 208 351 1.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 SMART SM00065 20 168 5.3E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 SUPERFAMILY SSF46689 461 509 2.06E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:3.40.50.300 175 358 2.7E-62 T 12-10-2018 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:1.10.8.60 359 424 2.4E-19 T 12-10-2018 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 SUPERFAMILY SSF55781 7 167 1.68E-17 T 12-10-2018 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:1.10.10.60 458 510 2.6E-10 T 12-10-2018 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 Gene3D G3DSA:3.30.450.40 4 172 4.9E-18 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 Pfam PF01590 GAF domain 24 154 2.9E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_35690 77c747df38f27994ed0ecd8947b9bb3c 510 Pfam PF00158 Sigma-54 interaction domain 188 354 2.5E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_24320 3cafbe1256ebfc297f4281690d72045e 454 Gene3D G3DSA:1.10.443.10 192 401 4.2E-17 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_24320 3cafbe1256ebfc297f4281690d72045e 454 SUPERFAMILY SSF56349 191 393 3.53E-18 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_24320 3cafbe1256ebfc297f4281690d72045e 454 Pfam PF00589 Phage integrase family 206 338 4.3E-13 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_17920 891a12a495907fd94cafd3d58a484882 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 4.1E-30 T 12-10-2018 IPR022548 Domain of unknown function DUF2846 K04M3_17920 891a12a495907fd94cafd3d58a484882 154 PIRSF PIRSF012335 1 154 6.3E-66 T 12-10-2018 IPR016596 Protein of unknown function UCP012335 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.242 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 6.3E-19 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 1.8E-114 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 SUPERFAMILY SSF56349 113 303 4.12E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 Gene3D G3DSA:1.10.150.130 10 105 3.7E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.906 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 Gene3D G3DSA:1.10.443.10 118 299 2.4E-73 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 SUPERFAMILY SSF47823 11 107 1.33E-33 T 12-10-2018 K04M3_04780 69f575a62285bcb8c2deeb715858ce93 305 Pfam PF00589 Phage integrase family 120 291 1.8E-53 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_04320 bd114d804e2ef69cfedf7d8b529546b5 260 Pfam PF03799 Cell division protein FtsQ 127 239 7.5E-25 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB K04M3_04320 bd114d804e2ef69cfedf7d8b529546b5 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 3.9E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type K04M3_04320 bd114d804e2ef69cfedf7d8b529546b5 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.568 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 K04M3_04320 bd114d804e2ef69cfedf7d8b529546b5 260 Gene3D G3DSA:3.10.20.310 55 123 1.6E-24 T 12-10-2018 K04M3_04320 bd114d804e2ef69cfedf7d8b529546b5 260 Gene3D G3DSA:3.40.50.11690 125 252 2.5E-37 T 12-10-2018 K04M3_47470 37205b09351b4e4c14488243c60367db 342 SUPERFAMILY SSF53822 70 332 8.35E-48 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_47470 37205b09351b4e4c14488243c60367db 342 Pfam PF13377 Periplasmic binding protein-like domain 180 339 5.1E-24 T 12-10-2018 K04M3_47470 37205b09351b4e4c14488243c60367db 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.6E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_47470 37205b09351b4e4c14488243c60367db 342 SUPERFAMILY SSF47413 12 70 4.59E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_47470 37205b09351b4e4c14488243c60367db 342 Gene3D G3DSA:3.40.50.2300 74 318 7.7E-79 T 12-10-2018 K04M3_47470 37205b09351b4e4c14488243c60367db 342 Gene3D G3DSA:1.10.260.40 5 70 3.8E-22 T 12-10-2018 K04M3_47470 37205b09351b4e4c14488243c60367db 342 SMART SM00354 12 82 1.3E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_47470 37205b09351b4e4c14488243c60367db 342 Gene3D G3DSA:3.40.50.2300 168 301 7.7E-79 T 12-10-2018 K04M3_47470 37205b09351b4e4c14488243c60367db 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 12-10-2018 K04M3_17450 dfa78adcc792e8cd7344dce7c1863464 176 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 2 175 1.0E-66 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 K04M3_17450 dfa78adcc792e8cd7344dce7c1863464 176 Pfam PF06578 YOP proteins translocation protein K (YscK) 2 176 1.2E-54 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 245 366 3.93E-36 T 12-10-2018 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 SMART SM00480 17 362 1.5E-148 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.8E-109 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.2E-38 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 PIRSF PIRSF000804 1 366 3.0E-118 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 1 118 3.02E-30 T 12-10-2018 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 126 244 1.88E-28 T 12-10-2018 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 1 122 3.0E-42 T 12-10-2018 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.9E-38 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 124 247 1.5E-36 T 12-10-2018 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 248 366 3.5E-39 T 12-10-2018 K04M3_00020 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.2E-35 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 K04M3_22930 d40e3f2995cbf3d2551b98742c58f407 136 Gene3D G3DSA:1.20.120.340 2 126 2.1E-38 T 12-10-2018 K04M3_22930 d40e3f2995cbf3d2551b98742c58f407 136 SUPERFAMILY SSF101116 6 127 1.96E-38 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 K04M3_22930 d40e3f2995cbf3d2551b98742c58f407 136 Pfam PF02561 Flagellar protein FliS 6 122 2.1E-36 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 K04M3_22930 d40e3f2995cbf3d2551b98742c58f407 136 PIRSF PIRSF039090 1 133 5.6E-42 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 K04M3_22930 d40e3f2995cbf3d2551b98742c58f407 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.3E-22 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 K04M3_35800 108a1cb8d206a5a4a1d792472c7aa58a 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 349 432 1.1E-7 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain K04M3_35800 108a1cb8d206a5a4a1d792472c7aa58a 435 Pfam PF01943 Polysaccharide biosynthesis protein 19 296 8.1E-11 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 3.5E-73 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 Pfam PF13721 SecD export protein N-terminal TM region 14 110 2.1E-22 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 Gene3D G3DSA:3.30.1360.200 288 428 1.0E-46 T 12-10-2018 K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.863 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 Gene3D G3DSA:3.30.70.3400 230 434 1.0E-46 T 12-10-2018 K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 SUPERFAMILY SSF82866 407 604 1.96E-40 T 12-10-2018 K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 1.4E-131 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 K04M3_45190 d130d76b4ae0d961b9c1b174cdcce119 612 Pfam PF02355 Protein export membrane protein 430 598 5.0E-18 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial K04M3_34710 44c7bbb54922a3ebd031f994621117e8 479 Pfam PF03929 PepSY-associated TM region 24 416 7.1E-64 T 12-10-2018 IPR005625 PepSY-associated TM protein K04M3_06080 59fc945195c7d4bed1eebaf486ac8928 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 2.0E-35 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 K04M3_06080 59fc945195c7d4bed1eebaf486ac8928 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 PIRSF PIRSF000171 360 558 9.1E-13 T 12-10-2018 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 PIRSF PIRSF000171 23 289 1.8E-28 T 12-10-2018 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 SUPERFAMILY SSF56425 262 377 1.21E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 SUPERFAMILY SSF51905 25 471 1.5E-75 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 Pfam PF00890 FAD binding domain 34 416 8.1E-101 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 546 1.6E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 Gene3D G3DSA:3.90.700.10 272 382 1.2E-154 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 Gene3D G3DSA:3.50.50.60 34 428 1.2E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 35 54 4.3E-8 T 12-10-2018 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 401 4.3E-8 T 12-10-2018 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 SUPERFAMILY SSF46977 449 549 2.09E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 31 544 2.6E-210 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 K04M3_26930 b4ab23cae7f83453cd11cb2dee05eed6 561 Gene3D G3DSA:1.20.58.100 449 561 6.9E-45 T 12-10-2018 K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.30.190.20 21 225 1.6E-80 T 12-10-2018 K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.40.50.790 68 159 1.6E-80 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.5E-106 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.048 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 SUPERFAMILY SSF56808 6 225 2.49E-82 T 12-10-2018 IPR023674 Ribosomal protein L1-like K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 PIRSF PIRSF002155 1 227 3.8E-79 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_30560 8c1ba8b3c18658d94a334f71b82c4fab 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.7E-52 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein K04M3_27190 6bca36edf637193dbe6a36530d363e7b 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 6.2E-11 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain K04M3_27190 6bca36edf637193dbe6a36530d363e7b 165 SMART SM00731 11 160 9.4E-55 T 12-10-2018 IPR006640 SprT-like K04M3_27190 6bca36edf637193dbe6a36530d363e7b 165 Pfam PF10263 SprT-like family 15 114 1.5E-18 T 12-10-2018 IPR006640 SprT-like K04M3_27190 6bca36edf637193dbe6a36530d363e7b 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.334 T 12-10-2018 IPR023483 Uncharacterised protein family SprT K04M3_07080 016ba7322e0f36b0d7c15c8a595c3024 365 Pfam PF02562 PhoH-like protein 120 323 2.5E-93 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 K04M3_07080 016ba7322e0f36b0d7c15c8a595c3024 365 SUPERFAMILY SSF52540 119 320 6.54E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_07080 016ba7322e0f36b0d7c15c8a595c3024 365 Gene3D G3DSA:3.40.50.300 117 323 2.7E-72 T 12-10-2018 K04M3_51810 a111d1ddd9148a5d04b6be9ea70c0a9a 233 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 3 135 1.1E-9 T 12-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family K04M3_51810 a111d1ddd9148a5d04b6be9ea70c0a9a 233 Gene3D G3DSA:3.90.1720.10 1 153 2.7E-7 T 12-10-2018 K04M3_51810 a111d1ddd9148a5d04b6be9ea70c0a9a 233 SUPERFAMILY SSF54001 3 131 7.85E-14 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily K04M3_41810 e838e6d2649d6db7b1423095a541f0b5 569 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.7E-19 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_41810 e838e6d2649d6db7b1423095a541f0b5 569 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 8.0E-37 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain K04M3_41810 e838e6d2649d6db7b1423095a541f0b5 569 Gene3D G3DSA:3.40.190.10 122 312 8.5E-40 T 12-10-2018 K04M3_41810 e838e6d2649d6db7b1423095a541f0b5 569 SUPERFAMILY SSF53850 117 559 5.79E-63 T 12-10-2018 K04M3_45070 d8374adc86d8dcc2b279bd9ac65f3594 102 Pfam PF03927 NapD protein 6 80 2.8E-29 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly K04M3_45070 d8374adc86d8dcc2b279bd9ac65f3594 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.167 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly K04M3_45070 d8374adc86d8dcc2b279bd9ac65f3594 102 Gene3D G3DSA:3.30.70.920 6 75 5.1E-22 T 12-10-2018 K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 SUPERFAMILY SSF51182 97 204 6.29E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 Pfam PF07883 Cupin domain 147 204 2.0E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 Gene3D G3DSA:1.10.260.40 26 92 2.5E-15 T 12-10-2018 K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 SUPERFAMILY SSF47413 26 90 1.58E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 Pfam PF01381 Helix-turn-helix 32 84 1.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 SMART SM00530 31 86 1.3E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_42340 2a07b39ff2b77283b1b24423d1041c54 207 Gene3D G3DSA:2.60.120.10 93 205 6.3E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_28050 0b95a0b0fc3d124924c31d242e347793 287 Gene3D G3DSA:3.40.50.300 2 158 1.0E-5 T 12-10-2018 K04M3_28050 0b95a0b0fc3d124924c31d242e347793 287 PIRSF PIRSF005052 1 286 9.6E-106 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 K04M3_28050 0b95a0b0fc3d124924c31d242e347793 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.808 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 K04M3_28050 0b95a0b0fc3d124924c31d242e347793 287 SUPERFAMILY SSF52540 2 151 4.28E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28050 0b95a0b0fc3d124924c31d242e347793 287 Pfam PF03668 P-loop ATPase protein family 1 284 1.2E-109 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 Gene3D G3DSA:3.40.50.720 28 317 2.6E-110 T 12-10-2018 K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 7.6E-55 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 37 320 1.4E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 SUPERFAMILY SSF52283 4 139 5.48E-32 T 12-10-2018 K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 SUPERFAMILY SSF51735 103 290 2.76E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_28100 ff539bae1d436ad558d7af64e778a76a 320 Gene3D G3DSA:3.40.50.720 99 288 2.6E-110 T 12-10-2018 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 668 25.123 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Gene3D G3DSA:2.30.42.20 484 666 4.2E-54 T 12-10-2018 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 SUPERFAMILY SSF54211 191 330 3.79E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Gene3D G3DSA:3.30.230.10 217 329 9.6E-40 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 SUPERFAMILY SSF118116 484 669 1.96E-37 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 3.4E-11 T 12-10-2018 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Gene3D G3DSA:3.30.565.10 1 216 2.9E-71 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 1.2E-39 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 SMART SM01340 212 330 4.0E-59 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Pfam PF08676 MutL C terminal dimerisation domain 484 624 5.6E-27 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 SUPERFAMILY SSF55874 1 207 9.82E-54 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 SMART SM00853 487 629 8.4E-13 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 Gene3D G3DSA:3.30.1370.100 528 622 4.2E-54 T 12-10-2018 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.5E-103 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 K04M3_29530 48851fb8ef28c9d452083d5d9ad87a83 670 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site K04M3_04760 d04d58f24f2b87921b604a217cbac4d7 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 4.0E-133 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 K04M3_04760 d04d58f24f2b87921b604a217cbac4d7 436 Pfam PF05525 Branched-chain amino acid transport protein 8 426 1.8E-150 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 K04M3_07650 549512a0b4fe4c63798ea31fce448c37 248 SMART SM00858 126 188 9.9E-11 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 K04M3_07650 549512a0b4fe4c63798ea31fce448c37 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 2.7E-52 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal K04M3_07650 549512a0b4fe4c63798ea31fce448c37 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 8.5E-41 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal K04M3_07650 549512a0b4fe4c63798ea31fce448c37 248 Gene3D G3DSA:2.30.30.760 188 248 5.9E-12 T 12-10-2018 K04M3_34520 dc7ee86f7a14441013ba69ea19c16b40 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 1.1E-58 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 K04M3_34520 dc7ee86f7a14441013ba69ea19c16b40 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 1.0E-60 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_34520 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_34520 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_34520 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_34520 dc7ee86f7a14441013ba69ea19c16b40 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.4E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_44070 b529d2ecf06111cea49749c53faffba3 266 SMART SM00382 32 234 2.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_44070 b529d2ecf06111cea49749c53faffba3 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 1.5E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal K04M3_44070 b529d2ecf06111cea49749c53faffba3 266 Pfam PF00005 ABC transporter 23 185 9.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_44070 b529d2ecf06111cea49749c53faffba3 266 Gene3D G3DSA:3.40.50.300 2 259 1.1E-61 T 12-10-2018 K04M3_44070 b529d2ecf06111cea49749c53faffba3 266 SUPERFAMILY SSF52540 6 256 5.97E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 SUPERFAMILY SSF53067 5 256 9.26E-94 T 12-10-2018 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 PIRSF PIRSF000538 4 503 1.7E-176 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 Gene3D G3DSA:3.30.420.40 2 254 9.7E-113 T 12-10-2018 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 Gene3D G3DSA:3.30.420.40 255 500 7.8E-93 T 12-10-2018 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 7.5E-61 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.093 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 1.7E-86 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.7E-226 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 K04M3_25160 bb9947d939608cd1ab9dbec0115b5fb2 505 SUPERFAMILY SSF53067 255 497 2.45E-85 T 12-10-2018 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 12-10-2018 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 12-10-2018 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 12-10-2018 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 12-10-2018 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 K04M3_28220 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 12-10-2018 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 8.8E-87 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 SUPERFAMILY SSF54862 37 173 1.28E-30 T 12-10-2018 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.1E-14 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 PIRSF PIRSF005784 3 188 8.1E-87 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 5.9E-18 T 12-10-2018 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.905 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 Gene3D G3DSA:3.30.70.20 82 180 2.8E-22 T 12-10-2018 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 Gene3D G3DSA:1.10.15.40 38 81 9.2E-8 T 12-10-2018 K04M3_21600 4b4df2487bf35a9827937628b0e40622 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_09880 845b8bab0eea355b2da783551fae5537 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_09880 845b8bab0eea355b2da783551fae5537 256 Pfam PF00005 ABC transporter 22 181 5.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_09880 845b8bab0eea355b2da783551fae5537 256 PIRSF PIRSF039085 3 256 2.0E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 K04M3_09880 845b8bab0eea355b2da783551fae5537 256 Gene3D G3DSA:3.40.50.300 4 255 2.3E-74 T 12-10-2018 K04M3_09880 845b8bab0eea355b2da783551fae5537 256 SMART SM00382 31 229 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_09880 845b8bab0eea355b2da783551fae5537 256 SUPERFAMILY SSF52540 7 251 1.9E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32640 76ec84474141fd52223682bc28f896f4 624 Gene3D G3DSA:3.30.450.20 57 246 4.7E-58 T 12-10-2018 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 PIRSF PIRSF036431 3 618 1.1E-189 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) K04M3_32640 76ec84474141fd52223682bc28f896f4 624 SMART SM00387 497 611 8.3E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_32640 76ec84474141fd52223682bc28f896f4 624 Gene3D G3DSA:3.30.450.20 68 186 4.7E-58 T 12-10-2018 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 608 6.1E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_32640 76ec84474141fd52223682bc28f896f4 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 5.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 5.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 5.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 565 5.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 SUPERFAMILY SSF103190 66 195 6.67E-16 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_32640 76ec84474141fd52223682bc28f896f4 624 Gene3D G3DSA:3.30.565.10 460 612 1.5E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_32640 76ec84474141fd52223682bc28f896f4 624 SUPERFAMILY SSF55874 458 611 2.89E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_32640 76ec84474141fd52223682bc28f896f4 624 Gene3D G3DSA:1.10.287.130 351 448 1.9E-15 T 12-10-2018 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 Pfam PF02743 Cache domain 49 238 7.7E-15 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_32640 76ec84474141fd52223682bc28f896f4 624 SUPERFAMILY SSF47384 371 450 2.16E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_24720 aaea61eafaa95fe71ff02819926f7267 102 SUPERFAMILY SSF82657 1 88 1.44E-31 T 12-10-2018 IPR036065 BolA-like superfamily K04M3_24720 aaea61eafaa95fe71ff02819926f7267 102 PIRSF PIRSF003113 1 99 5.5E-37 T 12-10-2018 IPR002634 BolA protein K04M3_24720 aaea61eafaa95fe71ff02819926f7267 102 Pfam PF01722 BolA-like protein 10 83 6.8E-30 T 12-10-2018 IPR002634 BolA protein K04M3_24720 aaea61eafaa95fe71ff02819926f7267 102 Gene3D G3DSA:3.30.300.90 1 89 1.2E-34 T 12-10-2018 K04M3_05770 a6fd3274ee7062a602bad942a0cd7f4d 64 PIRSF PIRSF039003 1 64 1.3E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 K04M3_05770 a6fd3274ee7062a602bad942a0cd7f4d 64 SUPERFAMILY SSF140319 1 62 2.09E-28 T 12-10-2018 IPR036762 IscX-like superfamily K04M3_05770 a6fd3274ee7062a602bad942a0cd7f4d 64 Gene3D G3DSA:1.10.10.600 1 64 7.2E-30 T 12-10-2018 IPR036762 IscX-like superfamily K04M3_05770 a6fd3274ee7062a602bad942a0cd7f4d 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.8E-35 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 K04M3_05770 a6fd3274ee7062a602bad942a0cd7f4d 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 1.7E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 Pfam PF17200 Single Cache domain 2 47 188 1.9E-30 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 Gene3D G3DSA:3.30.450.20 29 202 4.0E-34 T 12-10-2018 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 SUPERFAMILY SSF58104 244 553 2.88E-75 T 12-10-2018 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 Gene3D G3DSA:1.10.287.950 221 553 3.3E-73 T 12-10-2018 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 SMART SM01049 44 130 6.1E-23 T 12-10-2018 IPR033480 Single Cache domain 2 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 518 3.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 SMART SM00304 222 276 2.9E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_49400 92c116acdaf4041b83e6a69172add378 553 SMART SM00283 291 552 1.3E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_19780 10977824f972904ce35fb3237f293960 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 1.2E-143 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase K04M3_19780 10977824f972904ce35fb3237f293960 460 SUPERFAMILY SSF46626 319 460 1.41E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_19780 10977824f972904ce35fb3237f293960 460 PIRSF PIRSF028099 5 460 1.1E-183 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase K04M3_19780 10977824f972904ce35fb3237f293960 460 Gene3D G3DSA:1.10.760.10 315 460 1.5E-8 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 7.3E-256 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 7.4E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Gene3D G3DSA:1.20.990.10 304 408 1.2E-72 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Gene3D G3DSA:2.40.30.10 257 463 1.2E-72 T 12-10-2018 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 SUPERFAMILY SSF63380 252 469 6.59E-64 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PIRSF PIRSF000207 20 623 4.6E-277 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 SUPERFAMILY SSF52343 468 623 6.68E-51 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.012 T 12-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Gene3D G3DSA:3.40.50.360 77 240 2.3E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 SUPERFAMILY SSF52218 86 233 1.43E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Pfam PF00258 Flavodoxin 89 213 4.0E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Pfam PF00667 FAD binding domain 254 448 1.3E-30 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00369 Flavodoxin signature 168 178 2.6E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00369 Flavodoxin signature 88 101 2.6E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00369 Flavodoxin signature 192 211 2.6E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00369 Flavodoxin signature 136 147 2.6E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 Gene3D G3DSA:3.40.50.80 469 623 3.9E-60 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_28640 a364b7c310a9bd511d98674bfd92a570 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.9E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_49120 bb2aa1f312a4937aa0be3e50abe16971 94 SUPERFAMILY SSF51182 3 93 2.71E-33 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_49120 bb2aa1f312a4937aa0be3e50abe16971 94 Gene3D G3DSA:2.60.120.10 1 94 1.3E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_49120 bb2aa1f312a4937aa0be3e50abe16971 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.242 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 K04M3_49120 bb2aa1f312a4937aa0be3e50abe16971 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 2.5E-34 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 K04M3_45420 4667e283affc859513cf7e92cf6d8c9c 204 PIRSF PIRSF006324 1 204 9.3E-42 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_45420 4667e283affc859513cf7e92cf6d8c9c 204 Pfam PF01810 LysE type translocator 15 202 1.2E-32 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_44640 297cadeccb6d588be4cf211a3edcfb50 204 Gene3D G3DSA:3.90.1340.10 2 60 1.2E-13 T 12-10-2018 IPR037053 Phage tail collar domain superfamily K04M3_44640 297cadeccb6d588be4cf211a3edcfb50 204 SUPERFAMILY SSF88874 3 139 1.27E-27 T 12-10-2018 K04M3_44640 297cadeccb6d588be4cf211a3edcfb50 204 Pfam PF07484 Phage Tail Collar Domain 8 64 4.3E-20 T 12-10-2018 IPR011083 Phage tail collar domain K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.2E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 Pfam PF00005 ABC transporter 35 192 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 SMART SM00382 43 241 7.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 Gene3D G3DSA:3.40.50.300 8 331 1.1E-77 T 12-10-2018 K04M3_25910 7ad685644d943c3d47c4efa15d3908c0 331 SUPERFAMILY SSF52540 9 262 4.5E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 SUPERFAMILY SSF50182 180 247 4.58E-18 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 Gene3D G3DSA:3.30.70.100 249 346 6.1E-14 T 12-10-2018 K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 Pfam PF00924 Mechanosensitive ion channel 138 341 1.5E-55 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 SUPERFAMILY SSF82861 97 179 9.55E-15 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 SUPERFAMILY SSF82689 252 351 1.12E-17 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 Gene3D G3DSA:2.30.30.60 196 248 4.2E-10 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily K04M3_34910 46895ac177b47bef1f7fca5d3debaca1 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Pfam PF14815 NUDIX domain 242 351 2.3E-21 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Gene3D G3DSA:3.90.79.10 223 356 7.9E-17 T 12-10-2018 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 SUPERFAMILY SSF48150 3 223 8.64E-75 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Pfam PF00633 Helix-hairpin-helix motif 97 125 8.7E-6 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 271 1.9E-126 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Gene3D G3DSA:1.10.340.30 19 130 1.6E-88 T 12-10-2018 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 SMART SM00525 189 209 1.8E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 1.8E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Gene3D G3DSA:1.10.1670.10 7 209 1.6E-88 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 2.4E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 SMART SM00478 37 188 7.8E-47 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 K04M3_27370 880a729262b02ee06441fa5e377f9beb 358 SUPERFAMILY SSF55811 218 353 4.46E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_42750 b331a26fb0f937ef112094b0e6b3cfd4 470 Pfam PF00171 Aldehyde dehydrogenase family 29 440 4.7E-95 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_42750 b331a26fb0f937ef112094b0e6b3cfd4 470 Gene3D G3DSA:3.40.605.10 22 440 1.5E-156 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_42750 b331a26fb0f937ef112094b0e6b3cfd4 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_42750 b331a26fb0f937ef112094b0e6b3cfd4 470 PIRSF PIRSF036492 2 470 8.9E-162 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 K04M3_42750 b331a26fb0f937ef112094b0e6b3cfd4 470 Gene3D G3DSA:3.40.309.10 221 420 1.5E-156 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_42750 b331a26fb0f937ef112094b0e6b3cfd4 470 SUPERFAMILY SSF53720 14 441 9.69E-119 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_03390 fcaff88343d530d386eca6d96698e133 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.686 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG K04M3_03390 fcaff88343d530d386eca6d96698e133 126 Pfam PF04379 ApaG domain 18 103 2.0E-33 T 12-10-2018 IPR007474 ApaG domain K04M3_03390 fcaff88343d530d386eca6d96698e133 126 SUPERFAMILY SSF110069 5 126 8.11E-47 T 12-10-2018 IPR036767 ApaG domain superfamily K04M3_03390 fcaff88343d530d386eca6d96698e133 126 Gene3D G3DSA:2.60.40.1470 1 126 5.8E-47 T 12-10-2018 IPR036767 ApaG domain superfamily K04M3_09960 c3a3e9b5f75be467824d3c621dd8e84d 254 Pfam PF01925 Sulfite exporter TauE/SafE 5 244 2.2E-45 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_05090 eb2079378b9e232afd8120ac6b2d0452 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 2.0E-23 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 K04M3_18010 e9d6f15c98b83a7105239816b93e39f0 187 Pfam PF12464 Maltose acetyltransferase 6 57 1.3E-13 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 K04M3_18010 e9d6f15c98b83a7105239816b93e39f0 187 Gene3D G3DSA:2.160.10.10 1 184 1.5E-66 T 12-10-2018 K04M3_18010 e9d6f15c98b83a7105239816b93e39f0 187 SMART SM01266 4 58 4.3E-19 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 K04M3_18010 e9d6f15c98b83a7105239816b93e39f0 187 SUPERFAMILY SSF51161 2 183 4.16E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_18010 e9d6f15c98b83a7105239816b93e39f0 187 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 2.3E-10 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 Pfam PF00027 Cyclic nucleotide-binding domain 23 101 2.5E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 2.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 Gene3D G3DSA:2.60.120.10 10 131 1.7E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 SUPERFAMILY SSF51206 13 132 5.11E-15 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 SMART SM00387 329 440 1.8E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 SMART SM00100 2 124 6.2E-4 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 Gene3D G3DSA:3.30.565.10 291 443 7.8E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 SUPERFAMILY SSF55874 293 437 3.93E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_14930 ddc0c5ea50aed6b380f61887e9765df0 445 Gene3D G3DSA:1.10.287.130 132 284 5.2E-10 T 12-10-2018 K04M3_21490 ef9fa0a30ca7015c7f2f95e4b3b164d3 85 SUPERFAMILY SSF54285 1 85 1.74E-19 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp K04M3_21490 ef9fa0a30ca7015c7f2f95e4b3b164d3 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 1.4E-20 T 12-10-2018 K04M3_21490 ef9fa0a30ca7015c7f2f95e4b3b164d3 85 Gene3D G3DSA:3.10.20.30 1 85 5.7E-23 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_21490 ef9fa0a30ca7015c7f2f95e4b3b164d3 85 Pfam PF02597 ThiS family 4 85 9.5E-21 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 K04M3_16580 5f838e7a9e468899493ea1ad03712548 467 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 148 415 0.002 T 12-10-2018 K04M3_16580 5f838e7a9e468899493ea1ad03712548 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 431 3.7E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_16580 5f838e7a9e468899493ea1ad03712548 467 SUPERFAMILY SSF58104 157 466 2.35E-66 T 12-10-2018 K04M3_16580 5f838e7a9e468899493ea1ad03712548 467 Gene3D G3DSA:1.10.287.950 139 466 4.4E-63 T 12-10-2018 K04M3_16580 5f838e7a9e468899493ea1ad03712548 467 SMART SM00283 205 466 8.0E-59 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_35750 c5f209178bf3b6a8645700667bfaf163 205 SUPERFAMILY SSF47616 72 198 1.67E-19 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_35750 c5f209178bf3b6a8645700667bfaf163 205 SUPERFAMILY SSF52833 1 77 1.86E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_35750 c5f209178bf3b6a8645700667bfaf163 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 9.9E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_35750 c5f209178bf3b6a8645700667bfaf163 205 Gene3D G3DSA:3.40.30.10 1 82 6.0E-31 T 12-10-2018 K04M3_35750 c5f209178bf3b6a8645700667bfaf163 205 Gene3D G3DSA:1.20.1050.10 84 198 5.0E-32 T 12-10-2018 K04M3_35750 c5f209178bf3b6a8645700667bfaf163 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 192 3.1E-9 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 SUPERFAMILY SSF55174 4 96 6.56E-12 T 12-10-2018 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 Gene3D G3DSA:3.30.70.580 70 228 3.6E-49 T 12-10-2018 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 Gene3D G3DSA:3.10.290.10 1 59 2.3E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 SMART SM00363 3 61 8.0E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 Pfam PF00849 RNA pseudouridylate synthase 68 185 6.0E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 Gene3D G3DSA:3.30.70.1560 130 220 3.6E-49 T 12-10-2018 K04M3_20130 c944645eb5d1ac3c3bf1e3383f0ef4b8 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 Gene3D G3DSA:3.40.718.10 1 363 2.3E-157 T 12-10-2018 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 SUPERFAMILY SSF53659 4 361 1.5E-123 T 12-10-2018 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 8.6E-165 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 SMART SM01329 7 356 2.5E-203 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 2.3E-136 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 K04M3_03480 bf853d833c14652156957b0c0712b81f 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.349 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 SUPERFAMILY SSF54675 15 128 1.92E-33 T 12-10-2018 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 Gene3D G3DSA:3.20.20.70 138 284 2.5E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 SUPERFAMILY SSF51690 130 294 1.77E-60 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 3.3E-27 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 5.5E-96 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 PIRSF PIRSF006250 16 295 1.2E-102 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 4.4E-59 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 K04M3_26260 ccc4f2751cc6cc5dc5bac1842340b124 295 Gene3D G3DSA:3.90.1170.20 21 293 2.5E-127 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 5.4E-117 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 2.3E-108 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 SUPERFAMILY SSF51569 2 288 4.19E-100 T 12-10-2018 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 Gene3D G3DSA:3.20.20.70 1 291 1.5E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.269 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.7E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.7E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.7E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.7E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 PIRSF PIRSF001365 1 291 9.2E-94 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 K04M3_23100 c74aabee4c6e766d6d1ef46682f766df 292 SMART SM01130 1 290 7.4E-140 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 Gene3D G3DSA:1.20.1530.20 4 384 1.5E-82 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 SUPERFAMILY SSF51735 401 529 1.52E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 Gene3D G3DSA:3.40.50.720 398 559 3.4E-35 T 12-10-2018 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 2.2E-67 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 Pfam PF02254 TrkA-N domain 402 511 7.2E-22 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 2.9E-81 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 K04M3_29240 d1559f3f3a55be8448e3c617c509b5e6 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.89 T 12-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 K04M3_20000 57a298083bc8d96b93a25411c1786e6f 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 1.1E-32 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 K04M3_20000 57a298083bc8d96b93a25411c1786e6f 414 Gene3D G3DSA:3.40.50.720 4 398 3.6E-144 T 12-10-2018 K04M3_20000 57a298083bc8d96b93a25411c1786e6f 414 Gene3D G3DSA:3.30.360.10 159 355 3.6E-144 T 12-10-2018 K04M3_20000 57a298083bc8d96b93a25411c1786e6f 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 2.9E-30 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 K04M3_20000 57a298083bc8d96b93a25411c1786e6f 414 SUPERFAMILY SSF51735 3 179 2.5E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_20100 767ee10582fc096297403e914fca8ef3 255 SUPERFAMILY SSF81301 6 78 6.18E-9 T 12-10-2018 K04M3_20100 767ee10582fc096297403e914fca8ef3 255 Gene3D G3DSA:3.30.460.10 7 100 9.3E-7 T 12-10-2018 K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 Gene3D G3DSA:1.10.10.10 1 160 5.1E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 SUPERFAMILY SSF46785 9 156 3.29E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 Pfam PF01047 MarR family 50 110 7.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 SMART SM00347 42 145 1.7E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 2.4E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 2.4E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 2.4E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_14120 4af757cbe9da75ec6b1d082b2063b0bc 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 2.4E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_32400 c562198dba6bef060c2905f6a7f0969d 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_32400 c562198dba6bef060c2905f6a7f0969d 245 SMART SM00382 26 216 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_32400 c562198dba6bef060c2905f6a7f0969d 245 SUPERFAMILY SSF52540 1 238 5.32E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32400 c562198dba6bef060c2905f6a7f0969d 245 Gene3D G3DSA:3.40.50.300 1 243 1.1E-76 T 12-10-2018 K04M3_32400 c562198dba6bef060c2905f6a7f0969d 245 PIRSF PIRSF039085 1 244 5.4E-105 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 K04M3_32400 c562198dba6bef060c2905f6a7f0969d 245 Pfam PF00005 ABC transporter 17 168 4.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 7.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 7.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 7.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 SUPERFAMILY SSF55890 322 372 1.7E-9 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 SMART SM00387 418 537 3.3E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 SUPERFAMILY SSF55785 215 306 1.5E-11 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 SUPERFAMILY SSF103190 40 169 9.81E-34 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Gene3D G3DSA:3.30.450.20 34 164 3.1E-38 T 12-10-2018 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 2.8E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Pfam PF00989 PAS fold 214 279 5.2E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 1.9E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Gene3D G3DSA:3.30.565.10 382 538 9.3E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 SMART SM00091 213 279 3.6E-5 T 12-10-2018 IPR000014 PAS domain K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Pfam PF17203 Single cache domain 3 38 168 3.2E-19 T 12-10-2018 IPR033463 Single cache domain 3 K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 SUPERFAMILY SSF55874 388 534 3.93E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_17700 af62c91edb2ad094fa208fe4749124f2 539 Gene3D G3DSA:3.30.450.20 199 310 1.6E-22 T 12-10-2018 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 2.2E-123 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 SUPERFAMILY SSF53927 14 156 5.14E-48 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 2.9E-53 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 110 3.6E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 PIRSF PIRSF006769 10 372 4.1E-118 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 Pfam PF01872 RibD C-terminal domain 158 358 3.4E-44 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 SUPERFAMILY SSF53597 155 366 1.07E-49 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 Gene3D G3DSA:3.40.140.10 10 146 8.3E-45 T 12-10-2018 K04M3_06570 10ce6ec9fb5612a23c8467c19d0a4660 375 Gene3D G3DSA:3.40.430.10 147 373 5.4E-62 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 Gene3D G3DSA:3.40.50.720 129 462 5.6E-114 T 12-10-2018 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 Gene3D G3DSA:3.30.360.10 287 452 5.6E-114 T 12-10-2018 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.4E-44 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 5.9E-113 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 SUPERFAMILY SSF55347 288 451 1.93E-52 T 12-10-2018 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 SUPERFAMILY SSF51735 128 304 7.04E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.1E-21 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_45380 02a8d97e15e1f8de1a2a8304e87da01e 477 SMART SM00846 127 288 2.5E-52 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_26720 d28c37bdf883460d6f65223cd48fae4d 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.984 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 K04M3_26720 d28c37bdf883460d6f65223cd48fae4d 158 Pfam PF02542 YgbB family 2 155 1.6E-65 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 K04M3_26720 d28c37bdf883460d6f65223cd48fae4d 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 K04M3_26720 d28c37bdf883460d6f65223cd48fae4d 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-68 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 K04M3_26720 d28c37bdf883460d6f65223cd48fae4d 158 Gene3D G3DSA:3.30.1330.50 1 158 1.0E-69 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 K04M3_26720 d28c37bdf883460d6f65223cd48fae4d 158 SUPERFAMILY SSF69765 1 157 1.07E-65 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 SUPERFAMILY SSF57783 16 64 1.98E-14 T 12-10-2018 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 SUPERFAMILY SSF57783 110 147 8.33E-5 T 12-10-2018 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.4E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.0E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 1.0 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.9E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 Gene3D G3DSA:3.30.65.10 62 105 1.9E-8 T 12-10-2018 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 Gene3D G3DSA:3.30.65.10 11 61 4.4E-9 T 12-10-2018 K04M3_31910 64424855e6b632df9db79d9595b135b7 189 SUPERFAMILY SSF57783 66 110 8.93E-15 T 12-10-2018 K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.85 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 PIRSF PIRSF002122 3 156 1.3E-63 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-64 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.9E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 SUPERFAMILY SSF47973 6 149 1.57E-59 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_29120 ed4013b6aceaa91c52e057c898c02da5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.6E-71 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 48 65 0.0027 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 47 1.1 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 103 117 2.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 85 101 4.3 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 67 83 0.22 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 SUPERFAMILY SSF51120 4 176 7.12E-22 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 63 81 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 76 84 4.9E-11 T 12-10-2018 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 94 103 4.9E-11 T 12-10-2018 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 46 57 4.9E-11 T 12-10-2018 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 PRINTS PR00313 NodO calcium binding signature 58 66 4.9E-11 T 12-10-2018 K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Gene3D G3DSA:2.150.10.10 69 194 1.6E-16 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_35460 d4ec802bb66f98a911175fee65127f6c 196 Gene3D G3DSA:2.150.10.10 23 68 3.7E-8 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_17880 ce3e7771ba59123316d547768fe61362 679 Pfam PF00135 Carboxylesterase family 73 616 2.4E-63 T 12-10-2018 IPR002018 Carboxylesterase, type B K04M3_17880 ce3e7771ba59123316d547768fe61362 679 SUPERFAMILY SSF53474 74 618 4.95E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_04010 5c87ec0d67dab1bceec47ed1ada1a068 194 SUPERFAMILY SSF53474 5 192 8.98E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_04010 5c87ec0d67dab1bceec47ed1ada1a068 194 Gene3D G3DSA:3.40.50.1820 6 194 2.0E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_04010 5c87ec0d67dab1bceec47ed1ada1a068 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 1.7E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 SUPERFAMILY SSF51206 23 162 1.23E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 Gene3D G3DSA:1.10.10.10 165 248 3.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 Gene3D G3DSA:2.60.120.10 43 164 5.0E-49 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 SMART SM00100 30 151 1.6E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.8E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 SUPERFAMILY SSF46785 165 245 2.02E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_16090 09a808a4dd99f3fec259e1d691963b4e 248 SMART SM00419 187 235 4.3E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_26120 1132168c07eafd4c7850363626d1fbd0 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.323 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 K04M3_26120 1132168c07eafd4c7850363626d1fbd0 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 9.4E-114 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 K04M3_26120 1132168c07eafd4c7850363626d1fbd0 264 Gene3D G3DSA:3.20.20.60 1 263 6.3E-106 T 12-10-2018 K04M3_26120 1132168c07eafd4c7850363626d1fbd0 264 SUPERFAMILY SSF51621 3 262 5.5E-106 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_26120 1132168c07eafd4c7850363626d1fbd0 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 9.6E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 K04M3_26120 1132168c07eafd4c7850363626d1fbd0 264 PIRSF PIRSF000388 1 264 6.5E-101 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 K04M3_44450 b4ade8c2be082a95af4c5bf59eb37c91 524 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 246 497 1.1E-67 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 K04M3_44450 b4ade8c2be082a95af4c5bf59eb37c91 524 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 1.3E-26 T 12-10-2018 IPR010657 ImpA, N-terminal K04M3_44450 b4ade8c2be082a95af4c5bf59eb37c91 524 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 497 1.8E-81 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 K04M3_15040 2b28dacc2c25b0897ea660d7a0131052 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 386 4.7E-104 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 K04M3_15040 2b28dacc2c25b0897ea660d7a0131052 397 SUPERFAMILY SSF56796 26 393 1.27E-106 T 12-10-2018 K04M3_15040 2b28dacc2c25b0897ea660d7a0131052 397 Gene3D G3DSA:3.40.50.1970 14 200 6.7E-53 T 12-10-2018 K04M3_15040 2b28dacc2c25b0897ea660d7a0131052 397 Gene3D G3DSA:1.20.1090.10 201 393 4.6E-51 T 12-10-2018 K04M3_28790 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 92 4.2E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 K04M3_28790 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28790 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_28790 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28790 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_28790 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_10990 4ec9821b167f3effd8acfd00b8013762 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 1.3E-78 T 12-10-2018 K04M3_10990 4ec9821b167f3effd8acfd00b8013762 418 Gene3D G3DSA:3.40.50.150 149 418 6.4E-99 T 12-10-2018 K04M3_10990 4ec9821b167f3effd8acfd00b8013762 418 PIRSF PIRSF003085 15 418 9.5E-118 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 K04M3_10990 4ec9821b167f3effd8acfd00b8013762 418 SUPERFAMILY SSF53335 21 370 6.85E-91 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_17390 900ee1dd331cfd740c95ebc7a7af67bc 152 Gene3D G3DSA:3.30.1460.10 1 131 8.6E-23 T 12-10-2018 K04M3_17390 900ee1dd331cfd740c95ebc7a7af67bc 152 SUPERFAMILY SSF69635 1 146 7.46E-37 T 12-10-2018 K04M3_17390 900ee1dd331cfd740c95ebc7a7af67bc 152 Pfam PF05932 Tir chaperone protein (CesT) family 6 126 4.3E-27 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 K04M3_31340 88afc92cd5c0becb581f98cf1f5a0ff7 393 Gene3D G3DSA:1.25.40.10 205 393 3.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_31340 88afc92cd5c0becb581f98cf1f5a0ff7 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 3.4E-109 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 K04M3_31340 88afc92cd5c0becb581f98cf1f5a0ff7 393 SUPERFAMILY SSF48452 273 392 3.3E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_31340 88afc92cd5c0becb581f98cf1f5a0ff7 393 SMART SM00028 327 360 0.0024 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_31340 88afc92cd5c0becb581f98cf1f5a0ff7 393 Pfam PF07219 HemY protein N-terminus 26 132 3.6E-26 T 12-10-2018 IPR010817 HemY, N-terminal K04M3_31340 88afc92cd5c0becb581f98cf1f5a0ff7 393 SUPERFAMILY SSF48452 34 359 7.59E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 342 355 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 252 267 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 290 307 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 158 169 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 123 135 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 63 81 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 269 284 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 195 222 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 PRINTS PR00992 Alanine racemase signature 29 45 1.5E-71 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 Gene3D G3DSA:3.20.20.10 13 220 3.8E-134 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 SMART SM01005 236 360 3.0E-67 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 6.7E-72 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 Gene3D G3DSA:2.40.37.10 11 355 3.8E-134 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 Hamap MF_01201 Alanine racemase. 4 360 35.162 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 TIGRFAM TIGR00492 alr: alanine racemase 7 359 1.1E-130 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 3.3E-42 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 SUPERFAMILY SSF51419 11 237 5.5E-72 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_28730 e3a6070b52478a2ac669fa3299223879 361 SUPERFAMILY SSF50621 229 359 4.53E-47 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 Gene3D G3DSA:2.40.420.20 270 338 1.3E-70 T 12-10-2018 K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 Gene3D G3DSA:1.10.287.470 94 153 1.3E-70 T 12-10-2018 K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 Gene3D G3DSA:2.40.30.170 46 269 1.3E-70 T 12-10-2018 K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 Gene3D G3DSA:2.40.50.100 59 187 1.3E-70 T 12-10-2018 K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 3.7E-27 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 340 3.7E-87 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_09400 c1645bcdb5c1b50dc9b37b71b559d144 364 SUPERFAMILY SSF111369 49 264 6.93E-37 T 12-10-2018 K04M3_48580 9c5fb44d5cdde4aa30385fbb30e9a0d4 204 SUPERFAMILY SSF51391 3 202 2.49E-68 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48580 9c5fb44d5cdde4aa30385fbb30e9a0d4 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.95 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48580 9c5fb44d5cdde4aa30385fbb30e9a0d4 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 7.3E-66 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_48580 9c5fb44d5cdde4aa30385fbb30e9a0d4 204 Gene3D G3DSA:3.20.20.70 1 204 1.8E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_48580 9c5fb44d5cdde4aa30385fbb30e9a0d4 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 9.1E-67 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_23860 ddd7a6077aa9b0937851d5615c60611d 211 Pfam PF01351 Ribonuclease HII 27 203 3.6E-39 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain K04M3_23860 ddd7a6077aa9b0937851d5615c60611d 211 SUPERFAMILY SSF53098 19 209 3.79E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_23860 ddd7a6077aa9b0937851d5615c60611d 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.853 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 K04M3_23860 ddd7a6077aa9b0937851d5615c60611d 211 Gene3D G3DSA:3.30.420.10 7 210 2.8E-78 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_33030 5607935c64f7091aa5ea17086d0263f8 286 Gene3D G3DSA:1.10.10.60 170 276 1.8E-19 T 12-10-2018 K04M3_33030 5607935c64f7091aa5ea17086d0263f8 286 Pfam PF12833 Helix-turn-helix domain 193 272 1.8E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_33030 5607935c64f7091aa5ea17086d0263f8 286 SMART SM00342 187 271 4.0E-8 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_18680 b6b195fcb1d05ecec246fd59d7ed1313 206 SUPERFAMILY SSF54862 1 197 2.41E-65 T 12-10-2018 K04M3_18680 b6b195fcb1d05ecec246fd59d7ed1313 206 Gene3D G3DSA:3.30.70.20 1 197 1.1E-53 T 12-10-2018 K04M3_18680 b6b195fcb1d05ecec246fd59d7ed1313 206 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 164 3.1E-78 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B K04M3_18680 b6b195fcb1d05ecec246fd59d7ed1313 206 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 100 111 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_18680 b6b195fcb1d05ecec246fd59d7ed1313 206 Pfam PF13247 4Fe-4S dicluster domain 59 155 2.0E-30 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 SMART SM00846 3 150 1.6E-93 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.8E-68 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 SUPERFAMILY SSF51735 3 166 3.58E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 Gene3D G3DSA:3.30.360.10 149 314 1.8E-152 T 12-10-2018 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.8E-134 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 Gene3D G3DSA:3.40.50.720 4 326 1.8E-152 T 12-10-2018 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 SUPERFAMILY SSF55347 149 312 6.86E-77 T 12-10-2018 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.8E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_22010 a9683ebe94c81c8ef51a05ea21d5fc85 331 PIRSF PIRSF000149 1 331 4.5E-133 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_36010 aa350c58170eca084adb8a6b17f0a7fe 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 K04M3_36010 aa350c58170eca084adb8a6b17f0a7fe 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 9.4E-21 T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 K04M3_12910 2c1f11c49381c760ff39b1673cf8dec8 210 Pfam PF06763 Prophage minor tail protein Z (GPZ) 8 204 1.0E-42 T 12-10-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail K04M3_12910 2c1f11c49381c760ff39b1673cf8dec8 210 PIRSF PIRSF004395 5 204 4.9E-50 T 12-10-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 PIRSF PIRSF000521 23 421 6.2E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 SUPERFAMILY SSF53383 4 420 5.55E-136 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 Pfam PF00202 Aminotransferase class-III 24 418 1.7E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.768 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 Gene3D G3DSA:3.90.1150.10 7 412 1.4E-168 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 4.7E-177 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 K04M3_10880 c3c1c7b799943931a2bb882fc30157f0 426 Gene3D G3DSA:3.40.640.10 58 327 1.4E-168 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_07600 88056b7f61d84f6775cbad572b112d7c 377 Gene3D G3DSA:2.40.10.410 291 377 5.7E-38 T 12-10-2018 IPR038165 FlgT, C-terminal domain superfamily K04M3_07600 88056b7f61d84f6775cbad572b112d7c 377 Gene3D G3DSA:3.40.50.10610 114 290 5.5E-58 T 12-10-2018 K04M3_07600 88056b7f61d84f6775cbad572b112d7c 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 6.1E-42 T 12-10-2018 IPR032386 Flagellar assembly protein T, middle domain K04M3_07600 88056b7f61d84f6775cbad572b112d7c 377 Gene3D G3DSA:3.30.1660.40 24 113 6.7E-37 T 12-10-2018 IPR038180 FlgT, N-terminal domain superfamily K04M3_07600 88056b7f61d84f6775cbad572b112d7c 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.4E-26 T 12-10-2018 IPR032370 Flagellar assembly protein T, N-terminal K04M3_07600 88056b7f61d84f6775cbad572b112d7c 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 7.4E-28 T 12-10-2018 IPR032388 Flagellar assembly protein T, C-terminal K04M3_13180 b438b15327adf6f7839a84fd793f27e8 76 Pfam PF00462 Glutaredoxin 4 60 6.3E-12 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 K04M3_13180 b438b15327adf6f7839a84fd793f27e8 76 SUPERFAMILY SSF52833 3 68 6.13E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_13180 b438b15327adf6f7839a84fd793f27e8 76 Gene3D G3DSA:3.40.30.10 2 75 3.4E-16 T 12-10-2018 K04M3_13180 b438b15327adf6f7839a84fd793f27e8 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 Gene3D G3DSA:1.10.287.950 89 418 5.6E-68 T 12-10-2018 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 SUPERFAMILY SSF58104 109 418 9.29E-75 T 12-10-2018 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 SMART SM00283 156 417 7.8E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_03940 0f5f2571dd0a7631cf4f31b62a76206f 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 204 384 1.8E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 SUPERFAMILY SSF46785 1 93 2.35E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 Gene3D G3DSA:1.10.10.10 1 93 6.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 SMART SM00418 8 88 1.2E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 Pfam PF12840 Helix-turn-helix domain 8 69 2.6E-12 T 12-10-2018 K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.3E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 6.3E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36470 52a6f946ed82cea41fd4e0d830721c53 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.3E-7 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 Gene3D G3DSA:3.30.70.890 162 280 2.7E-28 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 30.865 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 4.9E-9 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 Gene3D G3DSA:3.30.230.10 2 160 6.0E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 SUPERFAMILY SSF55060 162 277 2.21E-34 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 5.8E-92 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 Pfam PF08544 GHMP kinases C terminal 204 260 1.5E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 PIRSF PIRSF010376 4 280 6.5E-85 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 K04M3_07340 a06c53d2cee2c41af1b27960480cd58b 290 SUPERFAMILY SSF54211 6 158 1.67E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_46710 993037631070937530f4b6ae55298d6b 299 Gene3D G3DSA:1.10.3720.10 96 288 1.2E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_46710 993037631070937530f4b6ae55298d6b 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 283 3.0E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_46710 993037631070937530f4b6ae55298d6b 299 SUPERFAMILY SSF161098 99 281 3.92E-38 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_02710 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02710 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 63 3.6E-31 T 12-10-2018 K04M3_02710 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.7E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02710 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02710 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02710 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_14130 1531780ef800a19f97fe3a0f52d9372f 117 Gene3D G3DSA:3.90.1150.30 1 117 2.8E-42 T 12-10-2018 IPR038056 YjbR-like superfamily K04M3_14130 1531780ef800a19f97fe3a0f52d9372f 117 Pfam PF04237 YjbR 15 102 9.6E-25 T 12-10-2018 IPR007351 Uncharacterised protein YjbR K04M3_14130 1531780ef800a19f97fe3a0f52d9372f 117 SUPERFAMILY SSF142906 1 115 1.96E-38 T 12-10-2018 IPR038056 YjbR-like superfamily K04M3_13810 1531780ef800a19f97fe3a0f52d9372f 117 Gene3D G3DSA:3.90.1150.30 1 117 2.8E-42 T 12-10-2018 IPR038056 YjbR-like superfamily K04M3_13810 1531780ef800a19f97fe3a0f52d9372f 117 Pfam PF04237 YjbR 15 102 9.6E-25 T 12-10-2018 IPR007351 Uncharacterised protein YjbR K04M3_13810 1531780ef800a19f97fe3a0f52d9372f 117 SUPERFAMILY SSF142906 1 115 1.96E-38 T 12-10-2018 IPR038056 YjbR-like superfamily K04M3_35010 1c71e3c5a0cefde2d894d0095648c322 319 Gene3D G3DSA:2.40.160.10 22 319 5.6E-62 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_35010 1c71e3c5a0cefde2d894d0095648c322 319 SUPERFAMILY SSF56935 23 319 1.77E-50 T 12-10-2018 K04M3_35010 1c71e3c5a0cefde2d894d0095648c322 319 Pfam PF13609 Gram-negative porin 7 298 2.5E-28 T 12-10-2018 K04M3_00450 a20a2d501b3f6d76dd7e92c09ad348a1 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 2.3E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_00450 a20a2d501b3f6d76dd7e92c09ad348a1 325 SUPERFAMILY SSF161098 90 302 6.43E-18 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_00450 a20a2d501b3f6d76dd7e92c09ad348a1 325 Gene3D G3DSA:1.10.3720.10 84 314 2.8E-20 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_18500 01ca4e6da83a2c243f121615bd1271b0 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 37 371 1.2E-87 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 K04M3_18500 01ca4e6da83a2c243f121615bd1271b0 464 SUPERFAMILY SSF53383 4 447 4.23E-142 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_18500 01ca4e6da83a2c243f121615bd1271b0 464 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 443 4.0E-199 T 12-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 K04M3_18500 01ca4e6da83a2c243f121615bd1271b0 464 Gene3D G3DSA:3.40.640.10 66 357 1.9E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_18500 01ca4e6da83a2c243f121615bd1271b0 464 Gene3D G3DSA:3.90.1150.160 358 464 4.6E-32 T 12-10-2018 K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 5.2E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 5.2E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 5.2E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 Pfam PF01037 Lrp/AsnC ligand binding domain 77 139 7.3E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 SUPERFAMILY SSF46785 1 56 1.0E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 SUPERFAMILY SSF54909 62 145 5.9E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 SMART SM00344 1 110 2.0E-18 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 Gene3D G3DSA:1.10.10.10 1 52 1.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_45440 78882278f002841f630d0c86d26bcbf5 151 Gene3D G3DSA:3.30.70.920 57 147 1.1E-13 T 12-10-2018 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 Gene3D G3DSA:2.60.40.1190 673 879 7.2E-16 T 12-10-2018 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 SMART SM00642 52 467 5.0E-71 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 SUPERFAMILY SSF51445 40 473 6.41E-84 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 Gene3D G3DSA:3.20.20.80 36 469 2.7E-106 T 12-10-2018 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 Pfam PF00128 Alpha amylase, catalytic domain 84 432 8.9E-61 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 SUPERFAMILY SSF51011 488 564 1.12E-7 T 12-10-2018 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 SUPERFAMILY SSF49344 687 869 1.37E-20 T 12-10-2018 K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 690 871 1.6E-16 T 12-10-2018 IPR019248 Glucodextranase-like, C-terminal K04M3_34030 c87f9001de6a31f91450840d0f8179e3 885 Gene3D G3DSA:2.60.40.1180 471 564 8.8E-8 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.7E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_26340 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 3.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 8.1E-77 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 Pfam PF00813 FliP family 55 247 1.3E-75 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 4.1E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 4.1E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 4.1E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 4.1E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 4.1E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 4.1E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_34540 5b3ea10507cb911bf84fb9e2628e0f3d 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 SUPERFAMILY SSF111369 44 169 6.54E-13 T 12-10-2018 K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 Gene3D G3DSA:2.40.50.100 45 233 1.9E-35 T 12-10-2018 K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 Pfam PF13533 Biotin-lipoyl like 44 91 2.3E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 SUPERFAMILY SSF111369 175 243 7.06E-6 T 12-10-2018 K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 Gene3D G3DSA:1.10.287.470 77 199 1.9E-35 T 12-10-2018 K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 Gene3D G3DSA:2.40.30.170 234 279 1.9E-35 T 12-10-2018 K04M3_45280 b4ac5f43d201e71bc134d3812d27f3b6 352 Pfam PF13437 HlyD family secretion protein 200 290 3.7E-5 T 12-10-2018 K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 SUPERFAMILY SSF47413 2 71 5.63E-21 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 SMART SM00530 9 64 5.0E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 Gene3D G3DSA:1.10.260.40 2 74 3.0E-22 T 12-10-2018 K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 Gene3D G3DSA:2.60.120.10 75 179 6.5E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 SUPERFAMILY SSF51182 49 183 8.91E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_14030 ff4345880b34d6c7cde74eb97f6bf7ed 185 Pfam PF07883 Cupin domain 112 178 3.8E-16 T 12-10-2018 IPR013096 Cupin 2, conserved barrel K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 SUPERFAMILY SSF47413 2 71 5.63E-21 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 SMART SM00530 9 64 5.0E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 Gene3D G3DSA:1.10.260.40 2 74 3.0E-22 T 12-10-2018 K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 Gene3D G3DSA:2.60.120.10 75 179 6.5E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 SUPERFAMILY SSF51182 49 183 8.91E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_13670 ff4345880b34d6c7cde74eb97f6bf7ed 185 Pfam PF07883 Cupin domain 112 178 3.8E-16 T 12-10-2018 IPR013096 Cupin 2, conserved barrel K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 Gene3D G3DSA:1.10.10.10 11 147 2.9E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 Pfam PF01047 MarR family 37 95 6.4E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.1E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.1E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.1E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.1E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 SUPERFAMILY SSF46785 10 146 8.9E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45290 e1dd4203c54640b57cb3f282b471d754 151 SMART SM00347 30 131 1.2E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 SUPERFAMILY SSF53383 1 421 4.26E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 Gene3D G3DSA:3.40.640.10 1 285 3.4E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 8.3E-142 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 PIRSF PIRSF001434 1 422 2.1E-127 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.6E-199 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 K04M3_06120 6769dae883c61c99dd945e6a2e482cda 422 Gene3D G3DSA:3.90.1150.10 289 422 1.5E-50 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 SUPERFAMILY SSF111369 185 264 2.48E-11 T 12-10-2018 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 Gene3D G3DSA:1.10.287.470 87 111 1.1E-10 T 12-10-2018 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 Gene3D G3DSA:1.10.287.470 112 180 4.0E-8 T 12-10-2018 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 Pfam PF13533 Biotin-lipoyl like 55 99 3.1E-13 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_48850 876f7546f122af1ce926c94e1776a569 341 Pfam PF13437 HlyD family secretion protein 209 327 3.9E-13 T 12-10-2018 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 SUPERFAMILY SSF111369 52 173 3.01E-11 T 12-10-2018 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 Gene3D G3DSA:2.40.50.100 55 86 1.1E-10 T 12-10-2018 K04M3_48850 876f7546f122af1ce926c94e1776a569 341 Gene3D G3DSA:2.40.30.170 223 339 1.6E-34 T 12-10-2018 K04M3_02250 433911c106f8ce2ab67aae4b80748d45 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 2.3E-6 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 K04M3_02250 433911c106f8ce2ab67aae4b80748d45 115 Gene3D G3DSA:3.30.429.10 1 115 1.7E-32 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily K04M3_02250 433911c106f8ce2ab67aae4b80748d45 115 SUPERFAMILY SSF55331 2 115 5.5E-34 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily K04M3_23620 b297adc49bf1dc420da05c9c51c50cfd 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.573 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 K04M3_23620 b297adc49bf1dc420da05c9c51c50cfd 208 SUPERFAMILY SSF53271 3 206 2.23E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_23620 b297adc49bf1dc420da05c9c51c50cfd 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 5.5E-92 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 K04M3_23620 b297adc49bf1dc420da05c9c51c50cfd 208 Gene3D G3DSA:3.40.50.2020 1 208 8.2E-74 T 12-10-2018 K04M3_23620 b297adc49bf1dc420da05c9c51c50cfd 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.9E-65 T 12-10-2018 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 Gene3D G3DSA:2.40.50.140 2 69 4.7E-28 T 12-10-2018 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 SUPERFAMILY SSF50249 3 69 2.42E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 28 37 1.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 7 22 1.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 43 61 1.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.2E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 PIRSF PIRSF002599 1 70 3.3E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 SMART SM00357 6 70 1.6E-27 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_23500 fec89e3d343c79c3ed28a970dd797360 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 373 1.2E-155 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 SMART SM00382 44 227 4.1E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 Pfam PF08402 TOBE domain 294 373 8.0E-12 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 Gene3D G3DSA:2.40.50.140 301 318 5.9E-12 T 12-10-2018 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 Pfam PF00005 ABC transporter 37 176 1.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 SUPERFAMILY SSF52540 20 259 6.28E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 Gene3D G3DSA:2.40.50.940 238 300 5.9E-12 T 12-10-2018 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 Gene3D G3DSA:3.40.50.300 19 237 4.5E-69 T 12-10-2018 K04M3_16030 c109d5c48bb762cd2fee79b11ec6802e 379 SUPERFAMILY SSF50331 252 374 2.27E-8 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 80 91 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 Pfam PF00037 4Fe-4S binding domain 142 163 2.4E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 SUPERFAMILY SSF54862 44 166 1.0E-20 T 12-10-2018 K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 Pfam PF12800 4Fe-4S binding domain 111 130 0.089 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 Pfam PF12838 4Fe-4S dicluster domain 49 94 4.0E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 9 163 8.3E-39 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 Gene3D G3DSA:3.30.70.20 45 98 2.3E-13 T 12-10-2018 K04M3_18710 de9076e5c8d60aa8afbacd50f4bba813 173 Gene3D G3DSA:3.30.70.20 110 168 1.6E-10 T 12-10-2018 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 SUPERFAMILY SSF55174 7 97 3.2E-14 T 12-10-2018 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 Pfam PF00849 RNA pseudouridylate synthase 67 193 1.5E-13 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 Gene3D G3DSA:3.30.70.580 68 227 1.2E-53 T 12-10-2018 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 SMART SM00363 7 65 2.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 Gene3D G3DSA:3.30.70.1560 132 205 1.2E-53 T 12-10-2018 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 1.1E-47 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 Pfam PF01479 S4 domain 8 52 5.3E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 SUPERFAMILY SSF55120 66 227 1.9E-37 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 Gene3D G3DSA:3.10.290.10 1 61 3.7E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_07440 f6f066bb9e5d61f7a82e61fd3461b0bc 385 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_36270 126f2e6ee13c22930239240c9ecde822 504 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site K04M3_36270 126f2e6ee13c22930239240c9ecde822 504 SUPERFAMILY SSF53850 34 491 5.43E-89 T 12-10-2018 K04M3_36270 126f2e6ee13c22930239240c9ecde822 504 PIRSF PIRSF002741 3 498 4.5E-59 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_36270 126f2e6ee13c22930239240c9ecde822 504 Gene3D G3DSA:3.40.190.10 73 487 2.7E-84 T 12-10-2018 K04M3_36270 126f2e6ee13c22930239240c9ecde822 504 Gene3D G3DSA:3.10.105.10 267 475 2.7E-84 T 12-10-2018 K04M3_36270 126f2e6ee13c22930239240c9ecde822 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 425 1.2E-57 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_43760 718f1cb5e994a31327d81510fd0a1be9 258 Gene3D G3DSA:3.90.226.10 1 258 4.9E-80 T 12-10-2018 K04M3_43760 718f1cb5e994a31327d81510fd0a1be9 258 SUPERFAMILY SSF52096 3 257 7.19E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_43760 718f1cb5e994a31327d81510fd0a1be9 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 5.1E-58 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_43760 718f1cb5e994a31327d81510fd0a1be9 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 K04M3_03150 25ecb258b9a0ad8c1598dac1e7a70f08 120 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 2.1E-18 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 K04M3_05130 c6130be5f7ead912251f3bcb9f555843 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 K04M3_05130 c6130be5f7ead912251f3bcb9f555843 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.001 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 K04M3_05130 c6130be5f7ead912251f3bcb9f555843 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 285 7.7E-84 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_05130 c6130be5f7ead912251f3bcb9f555843 327 Gene3D G3DSA:3.20.20.300 1 327 1.3E-125 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 K04M3_05130 c6130be5f7ead912251f3bcb9f555843 327 SUPERFAMILY SSF51445 2 300 3.16E-86 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 SUPERFAMILY SSF143800 1 68 2.12E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.4E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.4E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.4E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 8.7E-36 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 Pfam PF01197 Ribosomal protein L31 1 66 1.9E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 Gene3D G3DSA:2.30.170.50 1 71 9.1E-34 T 12-10-2018 K04M3_02610 7ac43f0a0df52bd197cb78a400fbeff7 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.691 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_27250 927ca5a4b8fb6b237decb19615aed17f 368 Pfam PF00437 Type II/IV secretion system protein 116 268 3.6E-36 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_27250 927ca5a4b8fb6b237decb19615aed17f 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 6.9E-126 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 K04M3_27250 927ca5a4b8fb6b237decb19615aed17f 368 Gene3D G3DSA:3.30.450.90 1 97 2.2E-22 T 12-10-2018 K04M3_27250 927ca5a4b8fb6b237decb19615aed17f 368 SUPERFAMILY SSF52540 3 334 1.73E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_27250 927ca5a4b8fb6b237decb19615aed17f 368 Gene3D G3DSA:3.40.50.300 99 356 3.2E-87 T 12-10-2018 K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 Gene3D G3DSA:1.10.10.10 1 56 3.5E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 SMART SM00420 9 61 8.1E-13 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 2.5E-45 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 9.0E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 SMART SM01134 73 234 2.2E-58 T 12-10-2018 K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 SUPERFAMILY SSF46785 4 65 3.03E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 SUPERFAMILY SSF100950 78 234 2.16E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_03600 91b7fec2b890bc035bb7e0a60971552b 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 K04M3_49570 aa9d480d89ef72bb24bef9f99fda6953 282 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_49570 aa9d480d89ef72bb24bef9f99fda6953 282 SUPERFAMILY SSF52540 15 263 1.21E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_49570 aa9d480d89ef72bb24bef9f99fda6953 282 Gene3D G3DSA:3.40.50.300 13 281 7.9E-85 T 12-10-2018 K04M3_49570 aa9d480d89ef72bb24bef9f99fda6953 282 Pfam PF00005 ABC transporter 36 191 1.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_49570 aa9d480d89ef72bb24bef9f99fda6953 282 SMART SM00382 44 250 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_13060 d27f2ba0c79d9ea0f66b14b0c35ca4e6 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2 345 4.0E-130 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 K04M3_13060 d27f2ba0c79d9ea0f66b14b0c35ca4e6 347 Pfam PF02277 Phosphoribosyltransferase 2 345 1.5E-127 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 K04M3_13060 d27f2ba0c79d9ea0f66b14b0c35ca4e6 347 Gene3D G3DSA:1.10.1610.10 12 345 1.6E-121 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 K04M3_13060 d27f2ba0c79d9ea0f66b14b0c35ca4e6 347 SUPERFAMILY SSF52733 2 346 9.68E-112 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 K04M3_13060 d27f2ba0c79d9ea0f66b14b0c35ca4e6 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.593 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 K04M3_13060 d27f2ba0c79d9ea0f66b14b0c35ca4e6 347 Gene3D G3DSA:3.40.50.10210 50 328 1.6E-121 T 12-10-2018 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 Gene3D G3DSA:1.10.10.10 2 90 1.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 Gene3D G3DSA:3.40.190.10 168 269 4.0E-55 T 12-10-2018 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 2.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 Gene3D G3DSA:3.40.190.10 98 298 4.0E-55 T 12-10-2018 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 SUPERFAMILY SSF53850 95 300 1.18E-34 T 12-10-2018 K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 SUPERFAMILY SSF46785 4 117 9.3E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_05560 c343c2f7b81d76e68171f8a74ef5d810 301 Pfam PF03466 LysR substrate binding domain 96 299 1.6E-37 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_52570 dd8811a441f1db9d46b1cda41816f9b4 363 Pfam PF06406 StbA protein 12 347 3.4E-20 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA K04M3_52570 dd8811a441f1db9d46b1cda41816f9b4 363 SUPERFAMILY SSF53067 199 349 1.15E-11 T 12-10-2018 K04M3_52570 dd8811a441f1db9d46b1cda41816f9b4 363 SUPERFAMILY SSF53067 10 177 1.19E-10 T 12-10-2018 K04M3_52570 dd8811a441f1db9d46b1cda41816f9b4 363 Gene3D G3DSA:3.30.420.40 8 198 3.7E-31 T 12-10-2018 K04M3_52570 dd8811a441f1db9d46b1cda41816f9b4 363 Gene3D G3DSA:3.30.420.40 200 333 1.7E-22 T 12-10-2018 K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 487 9.3E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 SUPERFAMILY SSF47384 281 350 9.22E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 Gene3D G3DSA:3.30.565.10 351 486 7.3E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 SMART SM00388 286 353 5.0E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 SMART SM00387 391 489 1.8E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 Gene3D G3DSA:1.10.287.130 293 350 7.3E-18 T 12-10-2018 K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 342 2.7E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 Pfam PF11884 Domain of unknown function (DUF3404) 27 285 6.1E-111 T 12-10-2018 IPR021821 Protein of unknown function DUF3404 K04M3_40570 b968923e4b58df7306be7c9ad46dd23b 494 SUPERFAMILY SSF55874 358 489 1.36E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_31130 3e86212a1d129f676116cdb15055c743 164 SUPERFAMILY SSF52799 13 161 3.13E-31 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like K04M3_31130 3e86212a1d129f676116cdb15055c743 164 Gene3D G3DSA:3.90.190.10 5 164 3.8E-32 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like K04M3_31130 3e86212a1d129f676116cdb15055c743 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 29 128 2.8E-8 T 12-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_31130 3e86212a1d129f676116cdb15055c743 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 K04M3_49440 1f4405be17fc357e3629518372f29532 340 SUPERFAMILY SSF55874 213 337 3.14E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_49440 1f4405be17fc357e3629518372f29532 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 339 3.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_49440 1f4405be17fc357e3629518372f29532 340 Pfam PF06580 Histidine kinase 149 227 1.6E-22 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 K04M3_49440 1f4405be17fc357e3629518372f29532 340 SMART SM00387 242 340 6.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_49440 1f4405be17fc357e3629518372f29532 340 Gene3D G3DSA:3.30.565.10 205 340 3.5E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 Gene3D G3DSA:3.20.20.70 1 298 1.4E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 1.8E-60 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 SMART SM01130 4 293 7.0E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 SUPERFAMILY SSF51569 3 291 3.87E-85 T 12-10-2018 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 PIRSF PIRSF001365 1 301 1.1E-84 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.2E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.2E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_13300 65a0bd3fad891c75aa638ea3c6b4d18f 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.2E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 SUPERFAMILY SSF53850 26 516 3.26E-128 T 12-10-2018 K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 1.4E-83 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 Gene3D G3DSA:3.90.76.10 57 165 7.3E-123 T 12-10-2018 K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 Gene3D G3DSA:3.10.105.10 279 494 7.3E-123 T 12-10-2018 K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 Gene3D G3DSA:3.40.190.10 32 278 7.3E-123 T 12-10-2018 K04M3_00440 61f15b00df9ceea3b508ca5c04fe6dba 517 PIRSF PIRSF002741 21 512 4.6E-92 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_36730 a88cb62e622b300ea2ac82441bf8cf91 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 7.7E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 K04M3_36730 a88cb62e622b300ea2ac82441bf8cf91 287 Gene3D G3DSA:1.10.10.10 3 82 3.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36730 a88cb62e622b300ea2ac82441bf8cf91 287 SUPERFAMILY SSF53697 97 260 2.23E-37 T 12-10-2018 K04M3_36730 a88cb62e622b300ea2ac82441bf8cf91 287 Pfam PF01380 SIS domain 124 250 2.1E-18 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_36730 a88cb62e622b300ea2ac82441bf8cf91 287 Gene3D G3DSA:3.40.50.10490 94 273 2.0E-40 T 12-10-2018 K04M3_36730 a88cb62e622b300ea2ac82441bf8cf91 287 SUPERFAMILY SSF46689 5 79 1.15E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_10550 a636362a7734838fc595ac0302ddd208 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 2.8E-53 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 K04M3_10550 a636362a7734838fc595ac0302ddd208 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 6.9E-36 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 K04M3_10550 a636362a7734838fc595ac0302ddd208 203 SUPERFAMILY SSF101327 15 189 7.19E-31 T 12-10-2018 IPR036255 YgfB-like superfamily K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Pfam PF13437 HlyD family secretion protein 208 312 1.5E-8 T 12-10-2018 K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:1.10.287.470 79 108 2.3E-11 T 12-10-2018 K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:2.40.50.100 189 238 2.0E-19 T 12-10-2018 K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:2.40.50.100 44 78 2.3E-11 T 12-10-2018 K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.6E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 SUPERFAMILY SSF111369 44 109 2.35E-8 T 12-10-2018 K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:1.10.287.470 111 188 2.0E-19 T 12-10-2018 K04M3_17730 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:2.40.30.170 239 322 2.0E-19 T 12-10-2018 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 SUPERFAMILY SSF55347 126 272 7.85E-62 T 12-10-2018 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 Gene3D G3DSA:3.40.50.720 1 150 1.1E-52 T 12-10-2018 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 SUPERFAMILY SSF69055 301 398 6.02E-31 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.743 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.8E-37 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 3.9E-39 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 SUPERFAMILY SSF51735 2 150 2.08E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 4.7E-161 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 PIRSF PIRSF006205 1 401 5.7E-152 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.9E-46 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 K04M3_23940 ee54f3898cbd618cd7b741e47bac7a2d 401 Gene3D G3DSA:1.10.1740.10 312 400 3.0E-28 T 12-10-2018 K04M3_15540 a2fbd0d2a7f4864e7c6fa38ec87ea0bf 106 Pfam PF13466 STAS domain 19 95 2.7E-9 T 12-10-2018 IPR002645 STAS domain K04M3_15540 a2fbd0d2a7f4864e7c6fa38ec87ea0bf 106 SUPERFAMILY SSF52091 6 101 7.46E-20 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_15540 a2fbd0d2a7f4864e7c6fa38ec87ea0bf 106 Gene3D G3DSA:3.30.750.24 2 105 2.0E-17 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_25920 9df234e35898aff833490975abe5eb8c 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 1.2E-23 T 12-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 K04M3_25920 9df234e35898aff833490975abe5eb8c 579 Gene3D G3DSA:2.60.40.10 1 93 1.0E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_25920 9df234e35898aff833490975abe5eb8c 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 1.3E-10 T 12-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 K04M3_25920 9df234e35898aff833490975abe5eb8c 579 SUPERFAMILY SSF81296 2 88 1.75E-14 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_25920 9df234e35898aff833490975abe5eb8c 579 SUPERFAMILY SSF48208 84 565 5.1E-94 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 K04M3_25920 9df234e35898aff833490975abe5eb8c 579 Gene3D G3DSA:1.50.10.10 94 579 7.6E-239 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 K04M3_26240 80727399328b8536e8c48242e40699d3 255 Gene3D G3DSA:1.20.120.530 97 236 1.2E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_26240 80727399328b8536e8c48242e40699d3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_26240 80727399328b8536e8c48242e40699d3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_26240 80727399328b8536e8c48242e40699d3 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_26240 80727399328b8536e8c48242e40699d3 255 SUPERFAMILY SSF48008 98 235 3.14E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_26240 80727399328b8536e8c48242e40699d3 255 Gene3D G3DSA:1.10.10.10 1 74 1.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26240 80727399328b8536e8c48242e40699d3 255 Pfam PF07729 FCD domain 99 226 4.3E-18 T 12-10-2018 IPR011711 GntR, C-terminal K04M3_26240 80727399328b8536e8c48242e40699d3 255 SUPERFAMILY SSF46785 5 76 2.13E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_26240 80727399328b8536e8c48242e40699d3 255 SMART SM00345 15 74 9.1E-28 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_26240 80727399328b8536e8c48242e40699d3 255 SMART SM00895 99 227 8.8E-18 T 12-10-2018 IPR011711 GntR, C-terminal K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 2.5E-7 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 SUPERFAMILY SSF63418 1 96 3.01E-26 T 12-10-2018 IPR035911 MurE/MurF, N-terminal K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Gene3D G3DSA:3.40.1390.10 1 80 2.6E-28 T 12-10-2018 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Gene3D G3DSA:3.90.190.20 315 453 4.5E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 5.5E-142 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.714 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 SUPERFAMILY SSF53623 100 313 1.07E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 SUPERFAMILY SSF53244 316 450 2.75E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Pfam PF08245 Mur ligase middle domain 105 295 5.3E-48 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Gene3D G3DSA:3.40.1190.10 81 314 4.5E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04260 e30153d4216bf889c3a6e3b3161ccb7d 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 6.8E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 K04M3_31930 580f5e94bebe2540b9df17648cdf98c1 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 288 8.5E-80 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 K04M3_31930 580f5e94bebe2540b9df17648cdf98c1 369 SUPERFAMILY SSF102405 83 290 1.98E-42 T 12-10-2018 K04M3_31930 580f5e94bebe2540b9df17648cdf98c1 369 Gene3D G3DSA:1.10.10.10 305 364 6.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_31930 580f5e94bebe2540b9df17648cdf98c1 369 Pfam PF02481 DNA recombination-mediator protein A 77 280 5.2E-78 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 K04M3_31930 580f5e94bebe2540b9df17648cdf98c1 369 Gene3D G3DSA:3.40.50.450 1 293 1.6E-98 T 12-10-2018 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF52172 2 132 1.18E-33 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00072 Response regulator receiver domain 4 116 3.2E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 SMART SM00421 146 203 2.0E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 SMART SM00448 2 115 8.3E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:3.40.50.12740 2 209 7.5E-60 T 12-10-2018 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_20080 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.557 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 SMART SM00411 1 91 4.4E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.6E-49 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 Gene3D G3DSA:4.10.520.10 40 92 1.8E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 Gene3D G3DSA:4.10.520.10 2 39 5.4E-12 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 K04M3_20840 45abfc487e87b19bbb988576a7241553 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.9E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 1.3E-4 T 12-10-2018 K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 SUPERFAMILY SSF51735 1 252 2.24E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 Gene3D G3DSA:3.40.50.720 1 252 1.2E-71 T 12-10-2018 K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.3E-51 T 12-10-2018 K04M3_43730 55096efee8946b6b1f895f8c35cbf569 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 Gene3D G3DSA:2.40.420.20 279 348 1.3E-75 T 12-10-2018 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 Gene3D G3DSA:1.10.287.470 99 158 1.3E-75 T 12-10-2018 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 SUPERFAMILY SSF111369 57 274 3.92E-32 T 12-10-2018 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 Gene3D G3DSA:2.40.50.100 65 197 1.3E-75 T 12-10-2018 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 4.1E-70 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 Gene3D G3DSA:2.40.30.170 58 278 1.3E-75 T 12-10-2018 K04M3_42310 a1f7319d36da6a53d4ec1bdd6b340de5 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 257 3.3E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 Pfam PF13353 4Fe-4S single cluster domain 115 182 5.9E-7 T 12-10-2018 K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 SUPERFAMILY SSF102114 102 324 2.22E-26 T 12-10-2018 K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 PIRSF PIRSF004911 3 340 8.0E-118 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 2.2E-128 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 Gene3D G3DSA:3.20.20.70 51 334 3.3E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 Pfam PF04055 Radical SAM superfamily 117 261 1.9E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_29910 6be5e6f5cb0c3e3261ac920996f469b9 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.1E-155 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 SUPERFAMILY SSF52540 20 454 7.41E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 1.4E-216 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Gene3D G3DSA:3.40.50.300 580 702 9.2E-26 T 12-10-2018 K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Gene3D G3DSA:3.40.50.300 459 579 5.5E-27 T 12-10-2018 K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 SUPERFAMILY SSF52540 374 713 8.35E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Gene3D G3DSA:3.40.50.300 216 449 3.4E-75 T 12-10-2018 K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Pfam PF13604 AAA domain 248 409 2.1E-30 T 12-10-2018 K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Gene3D G3DSA:1.10.10.1020 13 134 3.9E-22 T 12-10-2018 K04M3_24920 8df7f61ec8860dd6c1f011de76233079 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 711 49.774 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 K04M3_27260 63082fc36e061c63491365b2f4107322 346 SUPERFAMILY SSF52540 5 334 3.33E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_27260 63082fc36e061c63491365b2f4107322 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 12-10-2018 K04M3_27260 63082fc36e061c63491365b2f4107322 346 SMART SM00382 122 247 0.0059 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_27260 63082fc36e061c63491365b2f4107322 346 Gene3D G3DSA:3.40.50.300 101 344 3.4E-102 T 12-10-2018 K04M3_27260 63082fc36e061c63491365b2f4107322 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 4.5E-152 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 K04M3_27260 63082fc36e061c63491365b2f4107322 346 Pfam PF00437 Type II/IV secretion system protein 12 270 2.9E-47 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_27260 63082fc36e061c63491365b2f4107322 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_45780 47f6367100a6863e243af2d918410dc1 282 Pfam PF01734 Patatin-like phospholipase 9 175 1.1E-19 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 K04M3_45780 47f6367100a6863e243af2d918410dc1 282 Gene3D G3DSA:3.40.1090.10 95 232 1.8E-8 T 12-10-2018 K04M3_45780 47f6367100a6863e243af2d918410dc1 282 Gene3D G3DSA:3.40.1090.10 2 94 6.5E-8 T 12-10-2018 K04M3_45780 47f6367100a6863e243af2d918410dc1 282 SUPERFAMILY SSF52151 6 223 2.3E-33 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_38540 250a48f99bc217c0742ba29fb513e715 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 9.5E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_38540 250a48f99bc217c0742ba29fb513e715 294 Gene3D G3DSA:3.40.190.290 91 290 8.5E-60 T 12-10-2018 K04M3_38540 250a48f99bc217c0742ba29fb513e715 294 SUPERFAMILY SSF46785 6 86 1.44E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_38540 250a48f99bc217c0742ba29fb513e715 294 Gene3D G3DSA:1.10.10.10 3 89 8.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_38540 250a48f99bc217c0742ba29fb513e715 294 SUPERFAMILY SSF53850 89 292 1.33E-43 T 12-10-2018 K04M3_38540 250a48f99bc217c0742ba29fb513e715 294 Pfam PF03466 LysR substrate binding domain 88 289 4.7E-42 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_50860 c1bbbaf80cac6f1a03da6d31960fc581 597 Gene3D G3DSA:3.40.50.300 355 577 3.4E-13 T 12-10-2018 K04M3_50860 c1bbbaf80cac6f1a03da6d31960fc581 597 SUPERFAMILY SSF52540 106 567 1.33E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_50860 c1bbbaf80cac6f1a03da6d31960fc581 597 Pfam PF12696 TraM recognition site of TraD and TraG 439 558 1.6E-5 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 PIRSF PIRSF000371 1 313 1.0E-111 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 302 5.7E-94 T 12-10-2018 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 Gene3D G3DSA:3.20.20.70 1 79 1.5E-13 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 Gene3D G3DSA:3.20.20.70 103 309 4.4E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 Pfam PF13353 4Fe-4S single cluster domain 12 166 3.5E-11 T 12-10-2018 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 Pfam PF04055 Radical SAM superfamily 20 251 4.0E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 K04M3_34310 872ed5a504458b4685a629c76a67a6e2 313 SUPERFAMILY SSF102114 139 279 1.55E-15 T 12-10-2018 K04M3_00050 a69b47059298ae9a47b5cc766868f461 138 Gene3D G3DSA:3.10.50.30 45 129 1.4E-10 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 K04M3_00050 a69b47059298ae9a47b5cc766868f461 138 PIRSF PIRSF006092 32 123 5.7E-8 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 K04M3_00050 a69b47059298ae9a47b5cc766868f461 138 SUPERFAMILY SSF54534 46 121 1.57E-10 T 12-10-2018 K04M3_00050 a69b47059298ae9a47b5cc766868f461 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 48 119 5.7E-9 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 K04M3_28090 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.976 T 12-10-2018 IPR006839 Ribosome-associated, YjgA K04M3_28090 188f1bf42ca3f25f5e09f93aa9eb68ea 175 PIRSF PIRSF016183 1 174 6.8E-72 T 12-10-2018 IPR006839 Ribosome-associated, YjgA K04M3_28090 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 7.3E-56 T 12-10-2018 IPR006839 Ribosome-associated, YjgA K04M3_28090 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Gene3D G3DSA:1.10.60.30 28 102 2.1E-26 T 12-10-2018 K04M3_28090 188f1bf42ca3f25f5e09f93aa9eb68ea 175 Gene3D G3DSA:1.10.60.30 104 174 1.3E-24 T 12-10-2018 K04M3_28090 188f1bf42ca3f25f5e09f93aa9eb68ea 175 SUPERFAMILY SSF158710 28 170 3.53E-52 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily K04M3_28870 5b79d872bfd37fbe0d7a420a787d81d9 197 Gene3D G3DSA:3.30.70.60 92 197 6.2E-26 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 K04M3_28870 5b79d872bfd37fbe0d7a420a787d81d9 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 4.2E-45 T 12-10-2018 IPR007445 Pilus assembly protein, PilO K04M3_28870 5b79d872bfd37fbe0d7a420a787d81d9 197 PIRSF PIRSF016482 2 197 9.1E-68 T 12-10-2018 IPR007445 Pilus assembly protein, PilO K04M3_15500 5340b862c18f00b14750268f9e7b959f 126 Gene3D G3DSA:1.20.120.160 5 120 1.2E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_15500 5340b862c18f00b14750268f9e7b959f 126 SUPERFAMILY SSF47226 10 119 8.24E-23 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_15500 5340b862c18f00b14750268f9e7b959f 126 Pfam PF01627 Hpt domain 34 109 1.6E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 SUPERFAMILY SSF52518 5 328 4.36E-121 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 2.0E-167 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 Pfam PF02780 Transketolase, C-terminal domain 542 654 4.4E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 SUPERFAMILY SSF52518 333 525 2.5E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 SMART SM00861 353 524 1.0E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.6E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 SUPERFAMILY SSF52922 532 663 3.4E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 Gene3D G3DSA:3.40.50.970 1 324 6.0E-133 T 12-10-2018 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 Gene3D G3DSA:3.40.50.920 537 663 2.2E-46 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 K04M3_44900 67678504258df34d1c7ae345eb4dd936 663 Gene3D G3DSA:3.40.50.970 325 536 1.0E-84 T 12-10-2018 K04M3_12450 54fb7a7a89163c210b987e9b8ce53f87 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 2.8E-68 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein K04M3_12450 54fb7a7a89163c210b987e9b8ce53f87 263 SUPERFAMILY SSF89392 107 214 5.49E-6 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX K04M3_12450 54fb7a7a89163c210b987e9b8ce53f87 263 Gene3D G3DSA:2.50.20.10 25 261 7.5E-100 T 12-10-2018 K04M3_47940 3c775a792a86b354416f0daa6b63d9a8 410 Pfam PF01266 FAD dependent oxidoreductase 6 397 1.9E-65 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_47940 3c775a792a86b354416f0daa6b63d9a8 410 Gene3D G3DSA:3.50.50.60 6 393 3.0E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_47940 3c775a792a86b354416f0daa6b63d9a8 410 SUPERFAMILY SSF51905 5 300 1.99E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_47940 3c775a792a86b354416f0daa6b63d9a8 410 Gene3D G3DSA:3.30.9.10 89 359 3.0E-82 T 12-10-2018 K04M3_01880 785f5ec2cf63a8930e554873aff6432f 211 SUPERFAMILY SSF56784 5 197 5.97E-25 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_01880 785f5ec2cf63a8930e554873aff6432f 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 185 4.7E-11 T 12-10-2018 K04M3_01880 785f5ec2cf63a8930e554873aff6432f 211 Gene3D G3DSA:1.10.150.240 22 96 4.5E-18 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_01880 785f5ec2cf63a8930e554873aff6432f 211 Gene3D G3DSA:3.40.50.1000 11 198 4.5E-18 T 12-10-2018 IPR023214 HAD superfamily K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 SUPERFAMILY SSF47928 3 105 3.53E-28 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.9E-66 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 9.1E-54 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.4E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.4E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.4E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.4E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.4E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.163 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 Gene3D G3DSA:1.10.520.20 2 106 4.4E-38 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32260 8b8fcb9b994a0292810b62f4759e2e62 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 5.5E-103 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.602 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 SUPERFAMILY SSF53790 12 232 7.59E-86 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 Gene3D G3DSA:3.30.950.10 121 241 1.1E-44 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 PIRSF PIRSF005917 1 286 5.0E-109 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 9.0E-30 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 K04M3_04210 ccffe204255b79ecc2b0f4a257585fec 287 Gene3D G3DSA:3.40.1010.10 2 120 6.5E-48 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 K04M3_10870 3a499a56a72ed0adef073c3126555f50 88 Gene3D G3DSA:1.20.120.910 1 73 7.6E-23 T 12-10-2018 K04M3_10870 3a499a56a72ed0adef073c3126555f50 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 2.7E-13 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 K04M3_10870 3a499a56a72ed0adef073c3126555f50 88 SUPERFAMILY SSF57716 38 71 4.56E-7 T 12-10-2018 K04M3_46480 2016a0981e41bef2dd59115055e3a6d2 442 Gene3D G3DSA:2.40.50.100 66 252 2.4E-32 T 12-10-2018 K04M3_46480 2016a0981e41bef2dd59115055e3a6d2 442 Gene3D G3DSA:2.40.420.20 362 424 2.4E-32 T 12-10-2018 K04M3_46480 2016a0981e41bef2dd59115055e3a6d2 442 Gene3D G3DSA:1.10.287.470 103 218 2.4E-32 T 12-10-2018 K04M3_46480 2016a0981e41bef2dd59115055e3a6d2 442 SUPERFAMILY SSF111369 64 356 3.53E-7 T 12-10-2018 K04M3_46480 2016a0981e41bef2dd59115055e3a6d2 442 Gene3D G3DSA:2.40.30.170 60 361 2.4E-32 T 12-10-2018 K04M3_39990 be24ed0fe81617bf3a0e393cef55667e 328 SUPERFAMILY SSF53850 37 253 2.54E-26 T 12-10-2018 K04M3_39990 be24ed0fe81617bf3a0e393cef55667e 328 Gene3D G3DSA:3.40.190.10 46 307 2.6E-26 T 12-10-2018 K04M3_39990 be24ed0fe81617bf3a0e393cef55667e 328 Gene3D G3DSA:3.40.190.10 114 211 2.6E-26 T 12-10-2018 K04M3_39990 be24ed0fe81617bf3a0e393cef55667e 328 Pfam PF09084 NMT1/THI5 like 46 252 4.0E-18 T 12-10-2018 IPR015168 SsuA/THI5-like K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 SUPERFAMILY SSF53850 24 342 1.58E-92 T 12-10-2018 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PIRSF PIRSF019574 1 345 4.9E-125 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 Gene3D G3DSA:3.40.190.10 129 318 4.8E-121 T 12-10-2018 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 3.9E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 1.6E-84 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_15990 0f8166aebb2501c785f5cbd51c2f6643 345 Gene3D G3DSA:3.40.190.10 29 312 4.8E-121 T 12-10-2018 K04M3_09900 8879adee863c1ef0627e588494604cee 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 5.3E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_09900 8879adee863c1ef0627e588494604cee 246 SUPERFAMILY SSF161098 11 233 1.14E-39 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_09900 8879adee863c1ef0627e588494604cee 246 Gene3D G3DSA:1.10.3720.10 3 243 2.5E-49 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_09900 8879adee863c1ef0627e588494604cee 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 3.2E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF69742 1 156 7.32E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 2.9E-144 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF51735 160 313 7.28E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 5.2E-49 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.5E-50 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 Gene3D G3DSA:3.40.50.720 159 311 1.7E-45 T 12-10-2018 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.747 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 9.9E-24 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 PIRSF PIRSF000445 1 418 2.1E-156 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_07360 c3714b01ae4c59377c300109ac152a7e 418 Gene3D G3DSA:3.30.460.30 1 156 2.5E-55 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 348 2.7E-54 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 Gene3D G3DSA:1.10.287.470 91 149 1.3E-60 T 12-10-2018 K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 Gene3D G3DSA:2.40.50.100 57 189 1.3E-60 T 12-10-2018 K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 SUPERFAMILY SSF111369 48 267 4.58E-24 T 12-10-2018 K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 Gene3D G3DSA:2.40.30.170 43 269 1.3E-60 T 12-10-2018 K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 Pfam PF13533 Biotin-lipoyl like 58 104 7.1E-9 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_42300 69f86c2efa9b6fb575aec5de5d1c663e 353 Gene3D G3DSA:2.40.420.20 270 346 1.3E-60 T 12-10-2018 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 SUPERFAMILY SSF69336 1214 1465 1.31E-87 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.1E-102 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.5E-152 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 SUPERFAMILY SSF51395 434 1191 4.48E-250 T 12-10-2018 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Pfam PF01493 GXGXG motif 1236 1419 5.5E-74 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Gene3D G3DSA:2.160.20.60 1200 1468 1.7E-101 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 SUPERFAMILY SSF56235 13 429 6.33E-149 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_04520 8950781ad875ec61ceb0874d5e2b321a 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 3.2E-177 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain K04M3_47150 02cb824420d89ced8b552c94d392645e 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.3E-31 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_47150 02cb824420d89ced8b552c94d392645e 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 1.3E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_47150 02cb824420d89ced8b552c94d392645e 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_47150 02cb824420d89ced8b552c94d392645e 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 2.6E-54 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 K04M3_47150 02cb824420d89ced8b552c94d392645e 243 SUPERFAMILY SSF117143 77 176 1.22E-12 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like K04M3_07570 33baf730575ae665bab519ceb018a99b 320 SUPERFAMILY SSF56925 18 171 6.02E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_07570 33baf730575ae665bab519ceb018a99b 320 SUPERFAMILY SSF103088 183 311 4.05E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_07570 33baf730575ae665bab519ceb018a99b 320 Pfam PF01389 OmpA-like transmembrane domain 18 170 2.3E-33 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 Gene3D G3DSA:3.30.1330.60 185 318 1.2E-43 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_07570 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01021 OMPA domain signature 256 272 2.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01021 OMPA domain signature 211 233 2.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01021 OMPA domain signature 241 256 2.5E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 Pfam PF00691 OmpA family 211 305 1.3E-24 T 12-10-2018 IPR006665 OmpA-like domain K04M3_07570 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 294 314 3.3E-5 T 12-10-2018 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 256 273 3.3E-5 T 12-10-2018 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 274 293 3.3E-5 T 12-10-2018 K04M3_07570 33baf730575ae665bab519ceb018a99b 320 Gene3D G3DSA:2.40.160.20 5 184 5.6E-39 T 12-10-2018 K04M3_38990 0537fe8d7f4311f1bf453aff5881a5ea 151 Gene3D G3DSA:2.60.40.4150 25 150 1.0E-38 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily K04M3_38990 0537fe8d7f4311f1bf453aff5881a5ea 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 144 1.0E-39 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN K04M3_38990 0537fe8d7f4311f1bf453aff5881a5ea 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 146 2.0E-49 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN K04M3_15780 c4d065262c18486bd27a26461fce3be5 232 Gene3D G3DSA:1.10.3720.10 2 228 1.6E-25 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_15780 c4d065262c18486bd27a26461fce3be5 232 SUPERFAMILY SSF161098 15 222 4.32E-29 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_15780 c4d065262c18486bd27a26461fce3be5 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 3.4E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 SUPERFAMILY SSF48452 52 241 2.09E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 Gene3D G3DSA:1.25.40.10 149 257 4.3E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 Gene3D G3DSA:1.25.40.10 39 148 3.9E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 Gene3D G3DSA:1.25.40.10 263 397 5.0E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 SUPERFAMILY SSF48452 287 386 1.1E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 SMART SM00028 74 107 8.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 SMART SM00028 151 184 1.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 SMART SM00028 360 392 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_01480 e350f9d4ab2509326ca098d740b07f38 407 Pfam PF13181 Tetratricopeptide repeat 151 181 0.0091 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 Gene3D G3DSA:3.50.30.20 3 151 1.8E-61 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 SUPERFAMILY SSF52021 5 142 3.79E-57 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 SMART SM01097 3 133 8.5E-91 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.2E-52 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.1E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 SUPERFAMILY SSF52317 153 377 3.25E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.715 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 Gene3D G3DSA:3.40.50.880 152 378 1.8E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.6E-149 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 12-10-2018 K04M3_04400 9acf2d2a80f5298ebb22d0a7684ea26c 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 12-10-2018 K04M3_09990 87f46722652f0ec6ed2c41b117dfa982 359 SUPERFAMILY SSF56935 20 359 1.57E-41 T 12-10-2018 K04M3_09990 87f46722652f0ec6ed2c41b117dfa982 359 Pfam PF13609 Gram-negative porin 7 334 1.3E-18 T 12-10-2018 K04M3_09990 87f46722652f0ec6ed2c41b117dfa982 359 Gene3D G3DSA:2.40.160.10 20 359 3.0E-35 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_40860 06a7964132c3d48db3d4dddbd03249fd 114 Pfam PF10734 Protein of unknown function (DUF2523) 37 110 2.7E-5 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 K04M3_45960 8403a39f4b5c5a12f0474e120ac75ec0 264 SUPERFAMILY SSF81345 40 237 7.85E-10 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_45960 8403a39f4b5c5a12f0474e120ac75ec0 264 Pfam PF00950 ABC 3 transport family 165 240 4.1E-6 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 K04M3_45960 8403a39f4b5c5a12f0474e120ac75ec0 264 Pfam PF00950 ABC 3 transport family 4 155 2.4E-6 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 K04M3_38420 a0b6b38f6ffe2188d5e0520f94db43b5 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 1.5E-27 T 12-10-2018 IPR022201 Protein of unknown function DUF3726 K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 Gene3D G3DSA:1.10.3210.10 226 410 7.2E-51 T 12-10-2018 K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 Gene3D G3DSA:1.10.3210.10 10 189 2.2E-23 T 12-10-2018 K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 SUPERFAMILY SSF109604 16 184 1.82E-19 T 12-10-2018 K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 Pfam PF01966 HD domain 239 360 2.0E-19 T 12-10-2018 IPR006674 HD domain K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 Pfam PF01966 HD domain 27 140 2.8E-6 T 12-10-2018 IPR006674 HD domain K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 TIGRFAM TIGR00277 HDIG: HDIG domain 239 329 1.5E-8 T 12-10-2018 IPR006675 HDIG domain K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 SUPERFAMILY SSF109604 230 399 2.81E-33 T 12-10-2018 K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 SMART SM00471 21 150 0.99 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_15030 d9cdfd4c4d33ea700a5c002f2d6b1092 411 SMART SM00471 235 370 3.2E-11 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 Gene3D G3DSA:3.40.190.10 27 308 5.4E-107 T 12-10-2018 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 Gene3D G3DSA:3.40.190.10 130 338 5.4E-107 T 12-10-2018 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PIRSF PIRSF019574 2 344 1.7E-107 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 307 2.3E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_46350 d5bc66360ca406649d11242f51f1dc7e 344 SUPERFAMILY SSF53850 24 341 4.78E-87 T 12-10-2018 K04M3_15600 871720332cceeb1afc500dec8e083a89 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.4E-21 T 12-10-2018 IPR025990 Cysteine-rich CPXCG protein K04M3_15600 871720332cceeb1afc500dec8e083a89 64 PIRSF PIRSF037225 1 64 8.3E-24 T 12-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 K04M3_38080 28e2e26a3d1874c685ee19e28813b22e 290 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 6 284 1.0E-29 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_38080 28e2e26a3d1874c685ee19e28813b22e 290 Gene3D G3DSA:3.40.630.10 8 284 8.2E-84 T 12-10-2018 K04M3_38080 28e2e26a3d1874c685ee19e28813b22e 290 Hamap MF_00704 Probable aspartoacylase. 2 289 28.335 T 12-10-2018 IPR016708 Aspartoacylase GO:0016811 K04M3_38080 28e2e26a3d1874c685ee19e28813b22e 290 Gene3D G3DSA:2.20.25.160 214 261 8.2E-84 T 12-10-2018 K04M3_38080 28e2e26a3d1874c685ee19e28813b22e 290 SUPERFAMILY SSF53187 5 287 3.27E-67 T 12-10-2018 K04M3_38080 28e2e26a3d1874c685ee19e28813b22e 290 PIRSF PIRSF018001 2 290 8.3E-55 T 12-10-2018 IPR016708 Aspartoacylase GO:0016811 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 1.1E-35 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 SMART SM00893 8 194 1.3E-40 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 SUPERFAMILY SSF52402 8 193 3.91E-45 T 12-10-2018 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 Gene3D G3DSA:3.40.50.620 8 195 8.1E-48 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 Gene3D G3DSA:3.40.50.1220 196 321 4.4E-56 T 12-10-2018 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 PIRSF PIRSF000089 6 321 5.1E-107 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 Pfam PF01012 Electron transfer flavoprotein domain 8 167 1.4E-37 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 K04M3_38560 2c76d95cbc2b54cd217dfcb3e7f2df3b 321 SUPERFAMILY SSF52467 201 321 3.64E-47 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 SUPERFAMILY SSF50249 3 68 6.21E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 7.4E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 SMART SM00357 5 69 2.7E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 PIRSF PIRSF002599 1 69 1.4E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 PRINTS PR00050 Cold shock protein signature 27 36 2.9E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 PRINTS PR00050 Cold shock protein signature 42 60 2.9E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 PRINTS PR00050 Cold shock protein signature 6 21 2.9E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_45800 dbde29372d2c54bab5a9b0b021581d4e 69 Gene3D G3DSA:2.40.50.140 1 68 2.3E-29 T 12-10-2018 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 Pfam PF00034 Cytochrome c 200 308 3.2E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 PIRSF PIRSF000294 2 318 1.1E-75 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 Pfam PF03150 Di-haem cytochrome c peroxidase 47 189 6.7E-34 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 Gene3D G3DSA:1.10.760.10 192 311 7.5E-86 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 SUPERFAMILY SSF46626 33 179 1.1E-35 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 Gene3D G3DSA:1.10.760.10 46 191 7.5E-86 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_43610 a4e12f4cdb93130388f446d731157c39 322 SUPERFAMILY SSF46626 178 314 6.1E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_05810 552f564b04ca3b4451b22b8713b15062 316 SUPERFAMILY SSF47413 14 81 9.57E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_05810 552f564b04ca3b4451b22b8713b15062 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 6.8E-26 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 K04M3_05810 552f564b04ca3b4451b22b8713b15062 316 Pfam PF13413 Helix-turn-helix domain 20 78 2.2E-19 T 12-10-2018 K04M3_05810 552f564b04ca3b4451b22b8713b15062 316 SMART SM00530 19 80 2.3E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_05810 552f564b04ca3b4451b22b8713b15062 316 Gene3D G3DSA:1.10.260.40 7 116 3.7E-25 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 SUPERFAMILY SSF111369 72 127 3.27E-5 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 Gene3D G3DSA:2.40.50.100 76 129 8.6E-6 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 Gene3D G3DSA:2.40.30.170 339 422 1.5E-15 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 Pfam PF13437 HlyD family secretion protein 301 408 6.9E-18 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 Gene3D G3DSA:2.40.50.100 302 338 1.5E-15 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 Pfam PF13533 Biotin-lipoyl like 79 112 7.6E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 446 7.4E-100 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 Gene3D G3DSA:1.10.287.470 228 301 1.5E-15 T 12-10-2018 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 2.7E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 2.7E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 2.7E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 2.7E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 2.7E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_35480 2f029f416a37c7e993235ffead7bfd33 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 2.7E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 Gene3D G3DSA:2.40.50.180 31 146 6.2E-24 T 12-10-2018 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 SUPERFAMILY SSF50341 10 152 2.09E-29 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 Gene3D G3DSA:2.30.30.40 17 141 6.2E-24 T 12-10-2018 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 Gene3D G3DSA:3.40.50.2300 163 299 1.4E-21 T 12-10-2018 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 SMART SM00448 173 290 2.1E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 Pfam PF00072 Response regulator receiver domain 175 289 4.6E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 Pfam PF01584 CheW-like domain 14 149 2.6E-29 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 SUPERFAMILY SSF52172 173 294 5.41E-21 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 PIRSF PIRSF002867 1 298 3.1E-86 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV K04M3_36220 37d803f94d452ae48925869e7f8c0b90 304 SMART SM00260 11 147 3.2E-19 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 510 524 6.6E-18 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 340 364 6.6E-18 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 271 281 6.6E-18 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 487 505 6.6E-18 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 Pfam PF00263 Bacterial type II and III secretion system protein 345 522 3.0E-40 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 Gene3D G3DSA:3.55.50.30 48 146 3.4E-12 T 12-10-2018 K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 Pfam PF07655 Secretin N-terminal domain 145 242 3.9E-25 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 SMART SM00965 93 141 4.6E-7 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 K04M3_28350 9c2feae5e158cbdb05a95c2d430101c4 546 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 237 522 5.2E-90 T 12-10-2018 IPR013358 Pilus biogenesis, MshL K04M3_20490 4aca5efe5880a0bfb5790ee3ef99f50c 286 Pfam PF03466 LysR substrate binding domain 89 285 3.3E-28 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_20490 4aca5efe5880a0bfb5790ee3ef99f50c 286 Gene3D G3DSA:1.10.10.10 3 93 2.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20490 4aca5efe5880a0bfb5790ee3ef99f50c 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_20490 4aca5efe5880a0bfb5790ee3ef99f50c 286 SUPERFAMILY SSF46785 4 89 4.39E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_20490 4aca5efe5880a0bfb5790ee3ef99f50c 286 SUPERFAMILY SSF53850 89 286 2.71E-31 T 12-10-2018 K04M3_20490 4aca5efe5880a0bfb5790ee3ef99f50c 286 Gene3D G3DSA:3.40.190.290 94 284 5.4E-39 T 12-10-2018 K04M3_39970 f431fd38789d9d5ae6421a82a2fcb904 330 Pfam PF00296 Luciferase-like monooxygenase 18 303 1.5E-37 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 K04M3_39970 f431fd38789d9d5ae6421a82a2fcb904 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 326 2.2E-130 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 K04M3_39970 f431fd38789d9d5ae6421a82a2fcb904 330 SUPERFAMILY SSF51679 5 326 1.57E-80 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 K04M3_39970 f431fd38789d9d5ae6421a82a2fcb904 330 Gene3D G3DSA:3.20.20.30 4 330 3.2E-100 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 SUPERFAMILY SSF55931 102 468 3.92E-137 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 5.9E-211 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 SMART SM01230 102 379 3.7E-152 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 Gene3D G3DSA:3.30.590.10 105 457 5.6E-148 T 12-10-2018 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.0E-137 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 K04M3_01070 5744e8fb6973a06882de8a5774f70580 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 K04M3_46390 91765fc4956e4d669d5904077dbb2ece 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 49 526 6.5E-145 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_09230 63af2f1acbd2102a6dec94cf2c028e12 435 Pfam PF00425 chorismate binding enzyme 164 417 4.0E-71 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal K04M3_09230 63af2f1acbd2102a6dec94cf2c028e12 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 4.4E-102 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 K04M3_09230 63af2f1acbd2102a6dec94cf2c028e12 435 Gene3D G3DSA:3.60.120.10 1 429 8.2E-128 T 12-10-2018 IPR005801 ADC synthase GO:0009058 K04M3_09230 63af2f1acbd2102a6dec94cf2c028e12 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 30.943 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 K04M3_09230 63af2f1acbd2102a6dec94cf2c028e12 435 SUPERFAMILY SSF56322 28 425 1.3E-100 T 12-10-2018 IPR005801 ADC synthase GO:0009058 K04M3_38320 de760169c6054064b7c79024dee00a99 200 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 21 200 7.8E-84 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 K04M3_38320 de760169c6054064b7c79024dee00a99 200 Pfam PF00510 Cytochrome c oxidase subunit III 17 198 6.3E-17 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38320 de760169c6054064b7c79024dee00a99 200 SUPERFAMILY SSF81452 7 198 3.53E-59 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_38320 de760169c6054064b7c79024dee00a99 200 Gene3D G3DSA:1.20.120.80 15 200 8.7E-58 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_51640 608e2cdf4b12bbfc0e097820f2a76aa3 435 Gene3D G3DSA:1.10.443.10 189 403 7.6E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_51640 608e2cdf4b12bbfc0e097820f2a76aa3 435 Pfam PF00589 Phage integrase family 218 401 1.6E-6 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_51640 608e2cdf4b12bbfc0e097820f2a76aa3 435 SUPERFAMILY SSF56349 197 415 7.95E-21 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_42580 2fc99be13d8e8d6a57c0ab72aed8cba1 179 SUPERFAMILY SSF81901 41 153 6.93E-13 T 12-10-2018 K04M3_42580 2fc99be13d8e8d6a57c0ab72aed8cba1 179 Gene3D G3DSA:1.25.40.10 36 174 7.3E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_28080 3022c710d53ca5734155bff00e318cb4 447 Gene3D G3DSA:3.30.2290.10 7 232 3.8E-83 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal K04M3_28080 3022c710d53ca5734155bff00e318cb4 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.0E-60 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 K04M3_28080 3022c710d53ca5734155bff00e318cb4 447 SUPERFAMILY SSF111283 12 447 5.23E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 K04M3_38910 214804e09573ca69a97241be97fba54a 204 SUPERFAMILY SSF52833 1 89 1.21E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_38910 214804e09573ca69a97241be97fba54a 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 200 7.4E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal K04M3_38910 214804e09573ca69a97241be97fba54a 204 SUPERFAMILY SSF47616 72 203 5.29E-25 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_38910 214804e09573ca69a97241be97fba54a 204 Gene3D G3DSA:1.20.1050.10 83 199 2.5E-53 T 12-10-2018 K04M3_38910 214804e09573ca69a97241be97fba54a 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 1.8E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_38910 214804e09573ca69a97241be97fba54a 204 Gene3D G3DSA:3.40.30.10 4 201 2.5E-53 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Pfam PF02563 Polysaccharide biosynthesis/export protein 120 182 2.3E-13 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 SUPERFAMILY SSF142984 284 320 2.88E-5 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Gene3D G3DSA:3.30.1950.10 125 192 2.2E-5 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Gene3D G3DSA:3.10.560.10 193 278 1.5E-15 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Gene3D G3DSA:3.10.560.10 575 674 2.9E-12 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Gene3D G3DSA:3.10.560.10 815 893 2.3E-11 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Gene3D G3DSA:3.10.560.10 362 453 1.3E-7 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Gene3D G3DSA:3.10.560.10 279 361 5.2E-11 T 12-10-2018 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Pfam PF06251 Capsule biosynthesis GfcC 694 895 8.3E-11 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Pfam PF10531 SLBB domain 201 249 1.4E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Pfam PF10531 SLBB domain 284 330 6.8E-10 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_02020 4df633f1e45cd67333f00ac3304d9239 922 Pfam PF10531 SLBB domain 590 631 1.9E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 Pfam PF08448 PAS fold 13 124 6.3E-27 T 12-10-2018 IPR013656 PAS fold-4 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 SMART SM00421 156 213 4.5E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 SUPERFAMILY SSF55785 12 123 1.68E-14 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 Gene3D G3DSA:1.10.10.10 150 217 1.6E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 123 9.1E-6 T 12-10-2018 IPR000014 PAS domain K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 SUPERFAMILY SSF46894 148 218 2.58E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 Gene3D G3DSA:3.30.450.20 9 128 2.5E-16 T 12-10-2018 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 6.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 3.5E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 3.5E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_32660 d9051cc783cabc7b1238c69f35902723 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 3.5E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_17520 96ba664e3e4cdda87a363f30f96998b0 433 Gene3D G3DSA:3.30.70.1770 296 357 1.3E-8 T 12-10-2018 K04M3_17520 96ba664e3e4cdda87a363f30f96998b0 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 1.6E-123 T 12-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain K04M3_17520 96ba664e3e4cdda87a363f30f96998b0 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 1.9E-17 T 12-10-2018 IPR032030 YscD, cytoplasmic domain K04M3_17520 96ba664e3e4cdda87a363f30f96998b0 433 Gene3D G3DSA:2.60.200.20 1 120 4.1E-12 T 12-10-2018 K04M3_17520 96ba664e3e4cdda87a363f30f96998b0 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 3.6E-119 T 12-10-2018 IPR012843 Type III secretion system YscD/HrpQ K04M3_17520 96ba664e3e4cdda87a363f30f96998b0 433 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 299 413 0.003 T 12-10-2018 K04M3_26110 9f58cdcd009b8aa5eaf18ff20ec34582 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_26110 9f58cdcd009b8aa5eaf18ff20ec34582 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 4.0E-37 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_26110 9f58cdcd009b8aa5eaf18ff20ec34582 161 SUPERFAMILY SSF55083 1 159 1.57E-53 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_26110 9f58cdcd009b8aa5eaf18ff20ec34582 161 Gene3D G3DSA:3.30.70.560 1 159 4.6E-59 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_26110 9f58cdcd009b8aa5eaf18ff20ec34582 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.2E-45 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 Gene3D G3DSA:1.20.1560.10 1 321 7.0E-27 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 Gene3D G3DSA:3.40.50.300 326 573 7.5E-76 T 12-10-2018 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 2.7E-134 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 SUPERFAMILY SSF52540 333 571 2.3E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 Pfam PF00664 ABC transporter transmembrane region 53 272 1.1E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 Pfam PF00005 ABC transporter 356 502 8.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 SMART SM00382 365 549 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_12060 ed67b0e02f1f237f0a9b4c41bc979078 573 SUPERFAMILY SSF90123 7 323 1.06E-39 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_29950 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 Pfam PF01070 FMN-dependent dehydrogenase 159 335 1.1E-16 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 Pfam PF01070 FMN-dependent dehydrogenase 16 106 2.7E-10 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 Gene3D G3DSA:3.20.20.70 3 339 3.2E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 SMART SM01240 26 339 0.007 T 12-10-2018 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 PIRSF PIRSF003314 1 339 3.9E-118 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 338 2.3E-115 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 37.939 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 K04M3_47050 160699b29c7cad608f2c9f62e70daeb7 339 SUPERFAMILY SSF51395 26 337 4.49E-75 T 12-10-2018 K04M3_27240 756b8d48b950c6b2678940489f48fabc 141 SUPERFAMILY SSF53098 3 136 8.95E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_27240 756b8d48b950c6b2678940489f48fabc 141 SMART SM00732 3 104 3.3E-34 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 K04M3_27240 756b8d48b950c6b2678940489f48fabc 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.2E-48 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 K04M3_27240 756b8d48b950c6b2678940489f48fabc 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.126 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 K04M3_27240 756b8d48b950c6b2678940489f48fabc 141 Gene3D G3DSA:3.30.420.140 1 138 3.2E-39 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 K04M3_27240 756b8d48b950c6b2678940489f48fabc 141 Pfam PF03652 Holliday junction resolvase 4 136 1.1E-35 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 K04M3_16540 4d8ee4c8015d1712d98a436c76d4528c 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 4.6E-45 T 12-10-2018 IPR006214 Bax inhibitor 1-related K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 SUPERFAMILY SSF52440 2 122 6.04E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 Gene3D G3DSA:3.40.50.20 1 129 5.5E-53 T 12-10-2018 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 6.3E-49 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 Gene3D G3DSA:3.30.1490.20 137 196 3.4E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.819 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 SUPERFAMILY SSF56059 123 313 3.98E-59 T 12-10-2018 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 Gene3D G3DSA:3.30.470.20 197 300 1.7E-40 T 12-10-2018 K04M3_27220 c438240dee9ac92e12b99e8b7b553729 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.0E-140 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 Pfam PF06574 FAD synthetase 13 167 2.2E-59 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 PIRSF PIRSF004491 1 311 4.1E-108 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 SUPERFAMILY SSF52374 15 175 1.89E-36 T 12-10-2018 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 Gene3D G3DSA:2.40.30.30 188 311 2.5E-40 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 56 7.5E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 SMART SM00904 183 307 4.2E-64 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 Pfam PF01687 Riboflavin kinase 184 306 4.9E-39 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 6.0E-109 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 SUPERFAMILY SSF82114 174 309 2.4E-45 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 K04M3_05000 24073bdfd93b69858ee79619850a8cc5 311 Gene3D G3DSA:3.40.50.620 1 187 9.5E-63 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_01790 d875f1001797ea17b62d5972f2e4a4c4 236 Gene3D G3DSA:1.10.510.10 135 236 1.5E-15 T 12-10-2018 K04M3_01790 d875f1001797ea17b62d5972f2e4a4c4 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 4.8E-67 T 12-10-2018 K04M3_01790 d875f1001797ea17b62d5972f2e4a4c4 236 SUPERFAMILY SSF56112 44 197 1.35E-18 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_01790 d875f1001797ea17b62d5972f2e4a4c4 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 42.693 T 12-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 SUPERFAMILY SSF51735 3 223 3.12E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 162 0.0069 T 12-10-2018 K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 Gene3D G3DSA:3.40.50.720 1 239 1.1E-77 T 12-10-2018 K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_44230 5985df87080bc243fd175d8020f1aee0 239 Pfam PF00106 short chain dehydrogenase 3 188 2.9E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_25010 8f4553a113f815e6bb7d0c709d882380 208 Pfam PF00665 Integrase core domain 37 152 2.7E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_25010 8f4553a113f815e6bb7d0c709d882380 208 SUPERFAMILY SSF53098 30 192 2.91E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_25010 8f4553a113f815e6bb7d0c709d882380 208 Gene3D G3DSA:3.30.420.10 27 199 1.5E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_03990 c8ef69df48ed101609b1847ce736ac06 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.4E-38 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 Pfam PF01202 Shikimate kinase 13 169 1.5E-57 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 12-10-2018 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 12-10-2018 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 12-10-2018 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 12-10-2018 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 12-10-2018 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.116 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 Gene3D G3DSA:3.40.50.300 1 172 2.2E-58 T 12-10-2018 K04M3_28840 6ffdba2debfc527604d0c738c96220dd 172 SUPERFAMILY SSF52540 4 169 6.92E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24110 4de5ee74899089353bfa9c3e2c42b28f 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 185 5.5E-15 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_24110 4de5ee74899089353bfa9c3e2c42b28f 329 Gene3D G3DSA:3.40.47.10 2 329 6.4E-69 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_24110 4de5ee74899089353bfa9c3e2c42b28f 329 SUPERFAMILY SSF53901 5 328 8.21E-33 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_24110 4de5ee74899089353bfa9c3e2c42b28f 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 242 328 5.1E-17 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_30090 a34201308f381e571a587c42a1e4068c 583 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 50.999 T 12-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 K04M3_30090 a34201308f381e571a587c42a1e4068c 583 SUPERFAMILY SSF56176 500 571 1.06E-6 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_30090 a34201308f381e571a587c42a1e4068c 583 Pfam PF03471 Transporter associated domain 497 570 3.3E-6 T 12-10-2018 IPR005170 Transporter-associated domain K04M3_30090 a34201308f381e571a587c42a1e4068c 583 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.7E-56 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_30090 a34201308f381e571a587c42a1e4068c 583 Gene3D G3DSA:3.30.70.1450 412 483 1.6E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_30090 a34201308f381e571a587c42a1e4068c 583 SUPERFAMILY SSF116726 413 481 1.31E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_30090 a34201308f381e571a587c42a1e4068c 583 Gene3D G3DSA:1.20.1530.20 7 392 1.7E-21 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily K04M3_30090 a34201308f381e571a587c42a1e4068c 583 SMART SM01091 493 572 7.8E-8 T 12-10-2018 IPR005170 Transporter-associated domain K04M3_30090 a34201308f381e571a587c42a1e4068c 583 Pfam PF02080 TrkA-C domain 417 484 9.4E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.387 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 SUPERFAMILY SSF52540 6 204 2.48E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21220 d543be713a0433c163a5f52017a694aa 213 Gene3D G3DSA:3.40.50.300 3 213 4.2E-60 T 12-10-2018 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 2.0E-41 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.6E-89 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 12-10-2018 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 12-10-2018 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 12-10-2018 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 12-10-2018 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 12-10-2018 K04M3_21220 d543be713a0433c163a5f52017a694aa 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 12-10-2018 K04M3_26730 1996b7feaf2ae1ceaf6ed2eaa3f83d18 235 SUPERFAMILY SSF53448 9 230 1.73E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_26730 1996b7feaf2ae1ceaf6ed2eaa3f83d18 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 42.424 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 K04M3_26730 1996b7feaf2ae1ceaf6ed2eaa3f83d18 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 1.1E-77 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 K04M3_26730 1996b7feaf2ae1ceaf6ed2eaa3f83d18 235 Gene3D G3DSA:3.90.550.10 3 233 2.1E-75 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_26730 1996b7feaf2ae1ceaf6ed2eaa3f83d18 235 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 1.2E-77 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 K04M3_26730 1996b7feaf2ae1ceaf6ed2eaa3f83d18 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 SMART SM00382 314 435 0.0011 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 Gene3D G3DSA:3.30.450.90 146 286 6.3E-44 T 12-10-2018 K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 Pfam PF00437 Type II/IV secretion system protein 189 453 2.4E-77 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 SUPERFAMILY SSF160246 3 145 2.07E-40 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 Gene3D G3DSA:3.30.300.160 63 145 1.5E-5 T 12-10-2018 K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 Gene3D G3DSA:3.40.50.300 289 565 8.1E-102 T 12-10-2018 K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 SUPERFAMILY SSF52540 181 558 9.52E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28320 4a11324e68d04f62fe18af89e41a665b 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 1.8E-22 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal K04M3_41050 66f1a3c34948df6b79c340891090b403 148 SUPERFAMILY SSF47413 20 63 9.12E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_41050 66f1a3c34948df6b79c340891090b403 148 Pfam PF12472 Phage related protein 63 119 2.4E-19 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 K04M3_24710 f17db8763a4974eeb1c1c6c1692e6b30 478 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 33 288 1.6E-113 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 K04M3_24710 f17db8763a4974eeb1c1c6c1692e6b30 478 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 33 478 46.282 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 K04M3_24710 f17db8763a4974eeb1c1c6c1692e6b30 478 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 34 478 1.9E-204 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 K04M3_24710 f17db8763a4974eeb1c1c6c1692e6b30 478 Pfam PF11973 NQRA C-terminal domain 293 342 9.3E-22 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 K04M3_30430 87aabdfb1989e14824221b53d272d90f 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 228 9.8E-58 T 12-10-2018 IPR010858 Protein of unknown function DUF1481 K04M3_30430 87aabdfb1989e14824221b53d272d90f 232 PIRSF PIRSF028160 1 232 5.4E-118 T 12-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.1E-196 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 Gene3D G3DSA:3.30.1360.60 396 475 4.7E-28 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.3E-74 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 1.7E-19 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 K04M3_21010 7b897ad4f0270e919f2623eea79a4ae0 476 SUPERFAMILY SSF55604 402 472 3.01E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 Gene3D G3DSA:3.40.1030.10 71 325 5.3E-125 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 39.868 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 Gene3D G3DSA:1.20.970.10 14 187 5.3E-125 T 12-10-2018 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 5.4E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 SUPERFAMILY SSF47648 5 71 5.23E-19 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 SUPERFAMILY SSF52418 74 333 2.75E-94 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 5.4E-129 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 K04M3_20200 7c0553c8dca6d30ce04682e0bd9b1b18 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 2.3E-106 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_21790 ad70bca80a7cd648d669aa8f26b3a943 212 Pfam PF01914 MarC family integral membrane protein 8 208 2.8E-64 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_21790 ad70bca80a7cd648d669aa8f26b3a943 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 204 1.0E-65 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_47380 1481f752d2d9226c03c3c207adfc0482 301 Pfam PF00892 EamA-like transporter family 152 299 2.2E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_47380 1481f752d2d9226c03c3c207adfc0482 301 Pfam PF00892 EamA-like transporter family 5 136 3.2E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_47380 1481f752d2d9226c03c3c207adfc0482 301 SUPERFAMILY SSF103481 200 298 7.98E-7 T 12-10-2018 K04M3_47380 1481f752d2d9226c03c3c207adfc0482 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 3.9E-105 T 12-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative K04M3_47380 1481f752d2d9226c03c3c207adfc0482 301 SUPERFAMILY SSF103481 45 140 3.92E-9 T 12-10-2018 K04M3_04230 6abd1ccb28b9a627455757446732317d 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.206 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 K04M3_04230 6abd1ccb28b9a627455757446732317d 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 102 1.8E-25 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 K04M3_04230 6abd1ccb28b9a627455757446732317d 105 Pfam PF04999 Cell division protein FtsL 8 103 8.1E-36 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 K04M3_17020 8e7fa7063ffc2b92fce45e235b2ef18a 159 SUPERFAMILY SSF55729 5 148 6.38E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_17020 8e7fa7063ffc2b92fce45e235b2ef18a 159 Gene3D G3DSA:3.40.630.30 4 137 5.3E-32 T 12-10-2018 K04M3_17020 8e7fa7063ffc2b92fce45e235b2ef18a 159 Pfam PF00583 Acetyltransferase (GNAT) family 28 146 5.2E-18 T 12-10-2018 IPR000182 GNAT domain K04M3_21290 5347d2e2eafff0791835b755f12fa809 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.386 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 K04M3_21290 5347d2e2eafff0791835b755f12fa809 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 K04M3_21290 5347d2e2eafff0791835b755f12fa809 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 1.5E-303 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 K04M3_35360 82147cd5fb945d5fbb02239ba3c1271e 548 Pfam PF13584 Oxygen tolerance 17 469 2.2E-79 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 Gene3D G3DSA:1.20.5.1030 67 123 1.2E-17 T 12-10-2018 IPR038379 SecE superfamily K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 5.6E-21 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_30590 96118cd06073aeecf8d5ce715d47f0b7 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 SMART SM00418 5 83 1.2E-24 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 SUPERFAMILY SSF46785 5 85 2.46E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.1E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.1E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.1E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.1E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 Gene3D G3DSA:1.10.10.10 3 89 1.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_31150 94406453c33030d8c60091b8800ba1fc 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 1.2E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_33010 529b5e1ca8bc71e885eb0c30bb29d231 365 SUPERFAMILY SSF48452 84 157 3.56E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_33010 529b5e1ca8bc71e885eb0c30bb29d231 365 Pfam PF02698 DUF218 domain 194 320 2.3E-19 T 12-10-2018 IPR003848 Domain of unknown function DUF218 K04M3_33010 529b5e1ca8bc71e885eb0c30bb29d231 365 Gene3D G3DSA:1.25.40.10 68 210 6.1E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_19790 6d9642281df8e6b1d24755918da49d0a 420 Gene3D G3DSA:1.20.1420.20 16 402 9.6E-86 T 12-10-2018 IPR038352 Imelysin-like domain superfamily K04M3_19790 6d9642281df8e6b1d24755918da49d0a 420 Pfam PF09375 Imelysin 40 397 1.6E-97 T 12-10-2018 IPR018976 Imelysin-like domain K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 2.1E-28 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 SUPERFAMILY SSF56322 10 453 6.8E-143 T 12-10-2018 IPR005801 ADC synthase GO:0009058 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 Pfam PF00425 chorismate binding enzyme 191 444 3.2E-98 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 1.8E-121 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 K04M3_19430 1cb7375f02460697558e09d304f59bbf 454 Gene3D G3DSA:3.60.120.10 4 454 5.5E-172 T 12-10-2018 IPR005801 ADC synthase GO:0009058 K04M3_37540 4a13c97327cc5d96cad6c89f34434cf5 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 4.2E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_37540 4a13c97327cc5d96cad6c89f34434cf5 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 78 165 2.9E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_37540 4a13c97327cc5d96cad6c89f34434cf5 204 Gene3D G3DSA:1.10.260.80 24 75 2.0E-52 T 12-10-2018 K04M3_37540 4a13c97327cc5d96cad6c89f34434cf5 204 Gene3D G3DSA:3.40.50.1000 12 184 2.0E-52 T 12-10-2018 IPR023214 HAD superfamily K04M3_37540 4a13c97327cc5d96cad6c89f34434cf5 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 171 3.0E-17 T 12-10-2018 K04M3_37540 4a13c97327cc5d96cad6c89f34434cf5 204 SUPERFAMILY SSF56784 10 199 7.09E-33 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_27990 bc4e461a634b4ac01423e4ab0a99c2c9 187 PIRSF PIRSF028513 2 185 2.0E-30 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 K04M3_27990 bc4e461a634b4ac01423e4ab0a99c2c9 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.5E-46 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related K04M3_27990 bc4e461a634b4ac01423e4ab0a99c2c9 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 1.4E-48 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 K04M3_27990 bc4e461a634b4ac01423e4ab0a99c2c9 187 Gene3D G3DSA:2.60.450.10 59 186 2.6E-38 T 12-10-2018 K04M3_27990 bc4e461a634b4ac01423e4ab0a99c2c9 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.873 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 K04M3_08330 b24434898e249e00164570840d27854b 180 Gene3D G3DSA:1.20.1380.10 65 180 2.9E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 K04M3_08330 b24434898e249e00164570840d27854b 180 SUPERFAMILY SSF47598 1 35 4.67E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 K04M3_08330 b24434898e249e00164570840d27854b 180 Gene3D G3DSA:1.10.1220.10 1 41 1.2E-24 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 K04M3_08330 b24434898e249e00164570840d27854b 180 SUPERFAMILY SSF82808 67 179 2.88E-49 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 K04M3_08330 b24434898e249e00164570840d27854b 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.4E-24 T 12-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal K04M3_08330 b24434898e249e00164570840d27854b 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 42.491 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 K04M3_08330 b24434898e249e00164570840d27854b 180 PIRSF PIRSF019401 1 180 3.0E-55 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 K04M3_08330 b24434898e249e00164570840d27854b 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 1.3E-46 T 12-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 K04M3_05210 935af2f9b1652af54c80934125cdf361 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 30.443 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase K04M3_05210 935af2f9b1652af54c80934125cdf361 177 SUPERFAMILY SSF52972 4 173 2.4E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_05210 935af2f9b1652af54c80934125cdf361 177 Pfam PF01931 Protein of unknown function DUF84 9 167 1.3E-58 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 K04M3_05210 935af2f9b1652af54c80934125cdf361 177 Gene3D G3DSA:3.90.950.10 1 176 6.5E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_05210 935af2f9b1652af54c80934125cdf361 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 172 2.2E-47 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase K04M3_47390 332947f356298260d15d4892fa5252ac 234 SUPERFAMILY SSF46785 3 73 9.54E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_47390 332947f356298260d15d4892fa5252ac 234 Gene3D G3DSA:3.40.1410.10 70 229 2.3E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_47390 332947f356298260d15d4892fa5252ac 234 Pfam PF07702 UTRA domain 86 224 2.5E-35 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_47390 332947f356298260d15d4892fa5252ac 234 SMART SM00866 86 225 4.0E-31 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 K04M3_47390 332947f356298260d15d4892fa5252ac 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_47390 332947f356298260d15d4892fa5252ac 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.0E-116 T 12-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR K04M3_47390 332947f356298260d15d4892fa5252ac 234 SMART SM00345 6 65 4.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_47390 332947f356298260d15d4892fa5252ac 234 SUPERFAMILY SSF64288 53 228 9.74E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily K04M3_47390 332947f356298260d15d4892fa5252ac 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_47390 332947f356298260d15d4892fa5252ac 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_47390 332947f356298260d15d4892fa5252ac 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 SUPERFAMILY SSF52540 85 363 6.81E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.3E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 SMART SM00487 28 234 3.1E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.05 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 SMART SM00490 270 351 1.2E-32 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.1E-30 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 Gene3D G3DSA:3.40.50.300 2 222 4.5E-72 T 12-10-2018 K04M3_31480 0bfb0b92b95875de7f07145fb4060211 439 Gene3D G3DSA:3.40.50.300 229 407 7.8E-47 T 12-10-2018 K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 SUPERFAMILY SSF52540 3 189 2.36E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 SMART SM00072 3 187 9.1E-77 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 Pfam PF00625 Guanylate kinase 5 185 1.8E-62 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.1E-76 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 Gene3D G3DSA:3.40.50.300 8 183 1.4E-74 T 12-10-2018 K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.184 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 K04M3_01470 a51e2090db776f3b7dddd3fe0e59e45e 207 Gene3D G3DSA:3.30.63.10 37 96 1.4E-74 T 12-10-2018 K04M3_21770 8043d8ab5ac33ebb356fb1f4a8e944a1 247 Pfam PF00106 short chain dehydrogenase 27 211 9.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21770 8043d8ab5ac33ebb356fb1f4a8e944a1 247 SUPERFAMILY SSF51735 20 211 3.58E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_21770 8043d8ab5ac33ebb356fb1f4a8e944a1 247 Gene3D G3DSA:3.40.50.720 21 240 1.9E-21 T 12-10-2018 K04M3_03460 ad7f70503ee72a9f010614218ae40201 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 K04M3_03460 ad7f70503ee72a9f010614218ae40201 200 SUPERFAMILY SSF52016 1 196 1.49E-60 T 12-10-2018 K04M3_03460 ad7f70503ee72a9f010614218ae40201 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.052 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 K04M3_03460 ad7f70503ee72a9f010614218ae40201 200 Gene3D G3DSA:3.20.19.10 1 180 2.5E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 K04M3_03460 ad7f70503ee72a9f010614218ae40201 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 4.3E-98 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 Gene3D G3DSA:2.30.42.10 236 320 7.4E-11 T 12-10-2018 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 SMART SM00228 246 323 4.8E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 SMART SM00245 326 527 4.7E-61 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 8.2E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 8.7E-113 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF08180 B melanoma antigen family 9 36 4.8E-15 T 12-10-2018 IPR012530 B melanoma antigen-like K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 Gene3D G3DSA:3.90.226.10 325 545 1.0E-57 T 12-10-2018 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 SUPERFAMILY SSF52096 166 532 6.46E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 SUPERFAMILY SSF50156 217 338 4.15E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 5.2E-39 T 12-10-2018 IPR020992 Tail specific protease, C-terminal K04M3_16360 431aec90375e9a74fa22008a792b7d2b 668 Pfam PF03572 Peptidase family S41 356 525 1.3E-51 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 K04M3_17270 390e3d4349a532e16eebc2c2c454026f 297 Pfam PF07201 HrpJ-like domain 60 226 3.2E-36 T 12-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 K04M3_17270 390e3d4349a532e16eebc2c2c454026f 297 SUPERFAMILY SSF140591 75 272 3.84E-49 T 12-10-2018 K04M3_17270 390e3d4349a532e16eebc2c2c454026f 297 Gene3D G3DSA:1.10.150.630 174 261 1.8E-5 T 12-10-2018 K04M3_17270 390e3d4349a532e16eebc2c2c454026f 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 1.2E-80 T 12-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 K04M3_38490 6cf3b56b536aecf5fce888c539e1323a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 5.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_38490 6cf3b56b536aecf5fce888c539e1323a 222 Gene3D G3DSA:1.10.3720.10 3 217 5.1E-41 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_38490 6cf3b56b536aecf5fce888c539e1323a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 1.3E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_38490 6cf3b56b536aecf5fce888c539e1323a 222 SUPERFAMILY SSF161098 9 202 3.14E-31 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 SMART SM00487 265 459 9.7E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Gene3D G3DSA:3.40.50.300 208 450 8.3E-83 T 12-10-2018 K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 SMART SM00490 505 589 1.2E-21 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 SUPERFAMILY SSF50249 9 174 4.45E-41 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Gene3D G3DSA:1.10.150.20 3 41 5.5E-5 T 12-10-2018 K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Pfam PF17191 RecG wedge domain 14 172 1.3E-21 T 12-10-2018 IPR033454 RecG, wedge domain K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 1.3E-237 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Gene3D G3DSA:2.40.50.140 47 140 3.7E-13 T 12-10-2018 K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 SUPERFAMILY SSF52540 195 453 1.47E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Gene3D G3DSA:3.40.50.300 457 630 9.1E-53 T 12-10-2018 K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 SUPERFAMILY SSF52540 292 653 3.97E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Pfam PF00270 DEAD/DEAH box helicase 291 433 6.8E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_01430 41ec4843f3a020056b6921d2ee24955b 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 5.9E-17 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_29020 f97c4e981acab5299588029f45c66d97 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.6E-15 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal K04M3_29020 f97c4e981acab5299588029f45c66d97 179 Gene3D G3DSA:1.10.10.10 1 89 6.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_29020 f97c4e981acab5299588029f45c66d97 179 SUPERFAMILY SSF46785 3 176 3.18E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_29020 f97c4e981acab5299588029f45c66d97 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 Gene3D G3DSA:2.30.33.40 1 96 8.5E-33 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.605 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.8E-29 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 SUPERFAMILY SSF50129 1 96 1.08E-27 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_47010 ead2c4041bf61ccee63dc0d3d6b3087d 96 SMART SM00883 2 95 1.7E-40 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 K04M3_07720 ac6a90f054bcc50583ff4a16fe8467bc 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.7E-34 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G K04M3_07720 ac6a90f054bcc50583ff4a16fe8467bc 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 2.1E-53 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 K04M3_07720 ac6a90f054bcc50583ff4a16fe8467bc 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 7.8E-23 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain K04M3_07720 ac6a90f054bcc50583ff4a16fe8467bc 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_07720 ac6a90f054bcc50583ff4a16fe8467bc 249 SUPERFAMILY SSF117143 77 207 9.02E-17 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like K04M3_34800 13019e75a89c253eeb607b60bf744658 469 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 1.8E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_34800 13019e75a89c253eeb607b60bf744658 469 Pfam PF00266 Aminotransferase class-V 117 408 2.1E-31 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_34800 13019e75a89c253eeb607b60bf744658 469 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 269 288 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site K04M3_34800 13019e75a89c253eeb607b60bf744658 469 Gene3D G3DSA:3.90.1150.10 72 457 1.2E-67 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_34800 13019e75a89c253eeb607b60bf744658 469 Gene3D G3DSA:3.40.640.10 85 355 1.2E-67 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_34800 13019e75a89c253eeb607b60bf744658 469 SUPERFAMILY SSF53383 60 463 2.04E-65 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_37170 602720fde680c8ffb08bb120a33b4bdf 204 SUPERFAMILY SSF56529 12 186 1.01E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 K04M3_37170 602720fde680c8ffb08bb120a33b4bdf 204 Gene3D G3DSA:3.90.850.10 7 201 9.7E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 K04M3_37170 602720fde680c8ffb08bb120a33b4bdf 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 195 9.3E-28 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 K04M3_00860 ce8d39f5c43c8777651914902294215e 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 8.3E-23 T 12-10-2018 IPR003033 SCP2 sterol-binding domain K04M3_00860 ce8d39f5c43c8777651914902294215e 211 SUPERFAMILY SSF55718 15 117 9.89E-10 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily K04M3_00860 ce8d39f5c43c8777651914902294215e 211 Gene3D G3DSA:3.30.1050.10 7 117 6.2E-5 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 486 2.0E-157 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 Pfam PF04552 Sigma-54, DNA binding domain 329 487 3.8E-72 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 467 474 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 Pfam PF04963 Sigma-54 factor, core binding domain 128 317 6.4E-61 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 Gene3D G3DSA:1.10.10.1330 130 247 1.3E-25 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 376 395 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 PIRSF PIRSF000774 1 489 1.3E-151 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 Gene3D G3DSA:1.10.10.60 429 486 2.3E-23 T 12-10-2018 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 PRINTS PR00045 Sigma-54 factor signature 200 217 7.7E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 PRINTS PR00045 Sigma-54 factor signature 388 400 7.7E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 PRINTS PR00045 Sigma-54 factor signature 404 415 7.7E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 PRINTS PR00045 Sigma-54 factor signature 462 480 7.7E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_28020 e3456f17de60027b4d2511d05c8dd406 489 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 SUPERFAMILY SSF46977 452 588 2.75E-45 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.1E-274 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 SUPERFAMILY SSF51905 5 443 2.23E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 Gene3D G3DSA:1.20.58.100 431 547 1.1E-37 T 12-10-2018 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 8.6E-240 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 PIRSF PIRSF000171 1 580 2.7E-49 T 12-10-2018 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 Gene3D G3DSA:3.50.50.60 9 416 7.0E-170 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 Pfam PF00890 FAD binding domain 9 405 4.6E-118 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 Gene3D G3DSA:4.10.80.40 548 588 5.5E-24 T 12-10-2018 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.2E-35 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08400 76d34e005875b51ca1e21a9c42566daf 588 Gene3D G3DSA:3.90.700.10 246 350 7.0E-170 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08840 48dbac14dac39cc90cebc161846f0197 148 Pfam PF13279 Thioesterase-like superfamily 19 124 3.5E-12 T 12-10-2018 K04M3_08840 48dbac14dac39cc90cebc161846f0197 148 SUPERFAMILY SSF54637 10 143 2.92E-30 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_08840 48dbac14dac39cc90cebc161846f0197 148 Gene3D G3DSA:3.10.129.10 9 143 1.2E-24 T 12-10-2018 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 Pfam PF12833 Helix-turn-helix domain 1041 1115 1.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 SUPERFAMILY SSF46689 1070 1115 5.38E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 SMART SM00342 1034 1116 4.4E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 Gene3D G3DSA:2.130.10.10 88 358 8.5E-20 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 SUPERFAMILY SSF63829 249 440 2.13E-13 T 12-10-2018 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 Gene3D G3DSA:1.10.10.60 1013 1124 1.8E-25 T 12-10-2018 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1085 1100 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1100 1116 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1071 1112 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_08490 44ae19f338ab59bf7f853e2f94deadaf 1125 Gene3D G3DSA:2.130.10.10 371 613 4.3E-18 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_27320 f832157e8cf9cce0eabdd877fb83681e 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 4.9E-65 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 K04M3_27320 f832157e8cf9cce0eabdd877fb83681e 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.994 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 K04M3_27320 f832157e8cf9cce0eabdd877fb83681e 200 Gene3D G3DSA:3.90.950.10 1 199 1.4E-83 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_27320 f832157e8cf9cce0eabdd877fb83681e 200 Pfam PF01725 Ham1 family 4 191 7.0E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 K04M3_27320 f832157e8cf9cce0eabdd877fb83681e 200 SUPERFAMILY SSF52972 1 195 7.59E-74 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like K04M3_25210 7380b21d819b94712b4cf43d14842a5a 206 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 26 131 2.2E-8 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like K04M3_25210 7380b21d819b94712b4cf43d14842a5a 206 SUPERFAMILY SSF110857 22 146 7.72E-16 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily K04M3_25210 7380b21d819b94712b4cf43d14842a5a 206 Gene3D G3DSA:3.10.490.10 10 185 3.8E-9 T 12-10-2018 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 Pfam PF07238 PilZ domain 702 802 2.5E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 155 841 6.4E-285 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 Gene3D G3DSA:3.90.550.10 270 491 2.2E-78 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 Gene3D G3DSA:2.40.10.220 698 811 1.0E-9 T 12-10-2018 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 371 395 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 675 696 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 561 580 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 601 620 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 207 227 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 235 260 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 290 309 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 PRINTS PR01439 Cellulose synthase subunit A signature 532 558 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 SUPERFAMILY SSF53448 280 560 1.2E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 SUPERFAMILY SSF141371 704 794 6.87E-7 T 12-10-2018 K04M3_08000 6ef9c0c029e442f891234fa5eb470e03 877 Pfam PF00535 Glycosyl transferase family 2 286 455 4.7E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_27770 935523abf1c3188ede4469c563576d6e 149 Gene3D G3DSA:3.40.50.10110 1 146 5.0E-43 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily K04M3_27770 935523abf1c3188ede4469c563576d6e 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.4E-33 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 K04M3_27770 935523abf1c3188ede4469c563576d6e 149 SUPERFAMILY SSF102400 1 145 9.68E-42 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily K04M3_14280 45184ad9842df82dfffc2ec6ba315e61 98 Gene3D G3DSA:1.10.260.40 16 98 1.4E-10 T 12-10-2018 K04M3_14280 45184ad9842df82dfffc2ec6ba315e61 98 SUPERFAMILY SSF47413 27 97 2.61E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_14280 45184ad9842df82dfffc2ec6ba315e61 98 SMART SM00530 36 96 1.4E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_14280 45184ad9842df82dfffc2ec6ba315e61 98 Pfam PF12844 Helix-turn-helix domain 34 97 1.5E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_28230 aa45e67b1c49c4716abd5346d49866ff 1508 Gene3D G3DSA:2.60.120.200 533 785 3.9E-13 T 12-10-2018 K04M3_28230 aa45e67b1c49c4716abd5346d49866ff 1508 SUPERFAMILY SSF49899 528 786 4.52E-18 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily K04M3_28230 aa45e67b1c49c4716abd5346d49866ff 1508 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 12-10-2018 IPR010916 TonB box, conserved site K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 Pfam PF13377 Periplasmic binding protein-like domain 168 309 3.6E-16 T 12-10-2018 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 2.1E-138 T 12-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 SUPERFAMILY SSF53822 63 306 8.64E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 Gene3D G3DSA:3.40.50.2300 68 303 2.7E-63 T 12-10-2018 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 SMART SM00354 4 74 2.1E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 Gene3D G3DSA:3.40.50.2300 163 279 2.7E-63 T 12-10-2018 K04M3_06850 b74f80ed6538577cfbb41bbc88136871 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 12-10-2018 K04M3_12830 5fdfd8a998c45a45af43904cd8fc28c8 404 Pfam PF13102 Phage integrase SAM-like domain 105 194 4.9E-6 T 12-10-2018 IPR025269 Phage integrase SAM-like domain K04M3_12830 5fdfd8a998c45a45af43904cd8fc28c8 404 Gene3D G3DSA:1.10.443.10 209 387 8.6E-19 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_12830 5fdfd8a998c45a45af43904cd8fc28c8 404 Gene3D G3DSA:1.10.150.130 97 200 3.6E-15 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_12830 5fdfd8a998c45a45af43904cd8fc28c8 404 Pfam PF00589 Phage integrase family 214 372 9.0E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_12830 5fdfd8a998c45a45af43904cd8fc28c8 404 SUPERFAMILY SSF56349 101 377 1.85E-42 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 Gene3D G3DSA:3.40.640.10 58 283 3.3E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 Gene3D G3DSA:3.90.1150.10 42 372 3.3E-121 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 Pfam PF00155 Aminotransferase class I and II 42 372 4.9E-50 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 376 4.5E-136 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 45.973 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 K04M3_10900 f051b7d60acb35337cd763fcdcb355c8 383 SUPERFAMILY SSF53383 4 379 1.26E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 Pfam PF00107 Zinc-binding dehydrogenase 154 243 4.9E-19 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 Gene3D G3DSA:3.40.50.720 126 272 2.9E-68 T 12-10-2018 K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 SMART SM00829 8 325 2.0E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 Gene3D G3DSA:3.90.180.10 11 325 2.9E-68 T 12-10-2018 K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 SUPERFAMILY SSF50129 1 142 5.02E-28 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 1.2E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_16810 bb37c261c7c41a7c05a7855548cd6c26 330 SUPERFAMILY SSF51735 116 266 2.89E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_43880 13238ec579b2283181bbc4110de402e9 195 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_43880 13238ec579b2283181bbc4110de402e9 195 Pfam PF12464 Maltose acetyltransferase 19 63 7.0E-8 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 K04M3_43880 13238ec579b2283181bbc4110de402e9 195 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 140 175 7.4E-11 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_43880 13238ec579b2283181bbc4110de402e9 195 SMART SM01266 17 69 9.1E-7 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 K04M3_43880 13238ec579b2283181bbc4110de402e9 195 SUPERFAMILY SSF51161 15 193 3.6E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_43880 13238ec579b2283181bbc4110de402e9 195 Gene3D G3DSA:2.160.10.10 11 195 3.4E-64 T 12-10-2018 K04M3_05840 489cad174e508aeae4f13d7cf74be0f7 204 SUPERFAMILY SSF48452 89 188 4.7E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05840 489cad174e508aeae4f13d7cf74be0f7 204 Gene3D G3DSA:1.25.40.10 7 203 1.9E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05840 489cad174e508aeae4f13d7cf74be0f7 204 PIRSF PIRSF006170 1 204 2.7E-52 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 K04M3_05840 489cad174e508aeae4f13d7cf74be0f7 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.4E-54 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 K04M3_11370 3f742f54c4d11c5d90900215fbdf4d9a 301 SMART SM01131 178 300 1.4E-33 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 K04M3_11370 3f742f54c4d11c5d90900215fbdf4d9a 301 Gene3D G3DSA:3.90.1640.10 1 186 4.3E-63 T 12-10-2018 K04M3_11370 3f742f54c4d11c5d90900215fbdf4d9a 301 Gene3D G3DSA:3.10.310.20 187 301 2.2E-22 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 K04M3_11370 3f742f54c4d11c5d90900215fbdf4d9a 301 SUPERFAMILY SSF64182 1 298 6.41E-67 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily K04M3_11370 3f742f54c4d11c5d90900215fbdf4d9a 301 Pfam PF01368 DHH family 2 142 8.5E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 K04M3_11370 3f742f54c4d11c5d90900215fbdf4d9a 301 Pfam PF02833 DHHA2 domain 180 297 2.4E-15 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 Pfam PF00072 Response regulator receiver domain 7 119 4.7E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 SMART SM00421 148 205 3.8E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.9E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 SUPERFAMILY SSF52172 4 135 1.22E-35 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_19660 a93616ac22475091b48178ee29a31bde 212 SMART SM00448 5 118 6.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 Gene3D G3DSA:3.40.50.12740 5 211 2.2E-66 T 12-10-2018 K04M3_19660 a93616ac22475091b48178ee29a31bde 212 SUPERFAMILY SSF46894 139 211 3.27E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_31430 e9672f4fb7031b93bff967e00a37a48b 89 Gene3D G3DSA:3.10.20.30 1 89 1.7E-23 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_31430 e9672f4fb7031b93bff967e00a37a48b 89 SUPERFAMILY SSF54292 1 87 2.88E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_31430 e9672f4fb7031b93bff967e00a37a48b 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 78 1.7E-14 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 K04M3_31430 e9672f4fb7031b93bff967e00a37a48b 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 Gene3D G3DSA:3.30.70.20 178 254 1.2E-12 T 12-10-2018 K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 Gene3D G3DSA:3.30.70.20 413 482 2.6E-11 T 12-10-2018 K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 SUPERFAMILY SSF54862 143 504 3.62E-38 T 12-10-2018 K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_15870 a2c0f4fffa87b988da24eb7e2455500f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_33860 94b329c714f5b7e30025f71d97802104 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.9E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_33860 94b329c714f5b7e30025f71d97802104 296 Gene3D G3DSA:3.40.190.290 96 273 5.5E-18 T 12-10-2018 K04M3_33860 94b329c714f5b7e30025f71d97802104 296 Gene3D G3DSA:1.10.10.10 1 88 7.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_33860 94b329c714f5b7e30025f71d97802104 296 Pfam PF03466 LysR substrate binding domain 92 291 2.5E-19 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_33860 94b329c714f5b7e30025f71d97802104 296 SUPERFAMILY SSF46785 6 103 7.38E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_33860 94b329c714f5b7e30025f71d97802104 296 SUPERFAMILY SSF53850 92 293 3.72E-22 T 12-10-2018 K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 SUPERFAMILY SSF52540 331 571 2.37E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 Gene3D G3DSA:1.20.1560.10 1 324 2.6E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 SUPERFAMILY SSF90123 8 322 4.19E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 SMART SM00382 362 547 5.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 Pfam PF00664 ABC transporter transmembrane region 22 290 1.1E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 Gene3D G3DSA:3.40.50.300 329 588 7.0E-83 T 12-10-2018 K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 Pfam PF00005 ABC transporter 353 501 4.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_15130 2fc51080e44c2948311a4a8eb379cecb 591 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_44090 5f60f7fdb309328e1996e21ddeab7801 250 SUPERFAMILY SSF52402 2 242 2.44E-81 T 12-10-2018 K04M3_44090 5f60f7fdb309328e1996e21ddeab7801 250 Pfam PF01012 Electron transfer flavoprotein domain 26 205 2.7E-47 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 K04M3_44090 5f60f7fdb309328e1996e21ddeab7801 250 Gene3D G3DSA:3.40.50.620 1 248 6.1E-85 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_44090 5f60f7fdb309328e1996e21ddeab7801 250 SMART SM00893 23 211 4.9E-67 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 K04M3_44090 5f60f7fdb309328e1996e21ddeab7801 250 PIRSF PIRSF000090 1 249 8.9E-82 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 K04M3_35340 21de71f873fa7f88cbdf8752ddddd47f 249 Pfam PF00005 ABC transporter 19 174 1.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35340 21de71f873fa7f88cbdf8752ddddd47f 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_35340 21de71f873fa7f88cbdf8752ddddd47f 249 SUPERFAMILY SSF52540 4 236 1.05E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35340 21de71f873fa7f88cbdf8752ddddd47f 249 Gene3D G3DSA:3.40.50.300 4 246 3.0E-62 T 12-10-2018 K04M3_35340 21de71f873fa7f88cbdf8752ddddd47f 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 2.2E-126 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 K04M3_35340 21de71f873fa7f88cbdf8752ddddd47f 249 SMART SM00382 28 220 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 4.7E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 SUPERFAMILY SSF50129 2 145 2.13E-44 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 SMART SM00829 13 324 1.5E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.5E-139 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 1.6E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 SUPERFAMILY SSF51735 116 289 1.67E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 Gene3D G3DSA:3.90.180.10 17 325 1.6E-123 T 12-10-2018 K04M3_00170 ce25c375ab1cf7c62dbcbe27dcc77cf2 326 Gene3D G3DSA:3.40.50.720 126 294 1.6E-123 T 12-10-2018 K04M3_15840 7036147f4c3aff225db92ae5f763d43b 274 Gene3D G3DSA:3.10.20.10 36 118 9.9E-10 T 12-10-2018 K04M3_15840 7036147f4c3aff225db92ae5f763d43b 274 Pfam PF02634 FdhD/NarQ family 35 266 1.8E-73 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 K04M3_15840 7036147f4c3aff225db92ae5f763d43b 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 25.807 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 K04M3_15840 7036147f4c3aff225db92ae5f763d43b 274 SUPERFAMILY SSF53927 15 266 3.91E-70 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_15840 7036147f4c3aff225db92ae5f763d43b 274 Gene3D G3DSA:3.40.140.10 122 272 3.7E-42 T 12-10-2018 K04M3_15840 7036147f4c3aff225db92ae5f763d43b 274 PIRSF PIRSF015626 2 271 3.0E-97 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 SUPERFAMILY SSF52374 4 666 1.11E-146 T 12-10-2018 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 12-10-2018 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 8.6E-79 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 2.8E-26 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 SUPERFAMILY SSF47323 660 856 1.66E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.10.20.590 796 856 2.9E-24 T 12-10-2018 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 816 9.5E-17 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.428 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 12-10-2018 K04M3_07030 a95cd6cfcc3c2db3e050960d526744fa 857 SUPERFAMILY SSF50677 226 414 1.88E-56 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 K04M3_11820 fb3c956337e673747e1177da41536bb9 223 SUPERFAMILY SSF52540 1 217 1.11E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11820 fb3c956337e673747e1177da41536bb9 223 Pfam PF00005 ABC transporter 21 167 4.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_11820 fb3c956337e673747e1177da41536bb9 223 SMART SM00382 30 218 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_11820 fb3c956337e673747e1177da41536bb9 223 Gene3D G3DSA:3.40.50.300 1 223 2.3E-57 T 12-10-2018 K04M3_09420 795282f39028b64398954af1a36ccf8e 191 SUPERFAMILY SSF56925 31 191 3.14E-13 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_09420 795282f39028b64398954af1a36ccf8e 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 9.7E-23 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_09420 795282f39028b64398954af1a36ccf8e 191 Gene3D G3DSA:2.40.160.20 12 188 2.0E-10 T 12-10-2018 K04M3_01550 e059105d8ac25a59f39a7008143fdc78 341 Gene3D G3DSA:1.10.3720.10 102 332 1.0E-18 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_01550 e059105d8ac25a59f39a7008143fdc78 341 SUPERFAMILY SSF161098 107 321 3.14E-16 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_01550 e059105d8ac25a59f39a7008143fdc78 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 8.1E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.3E-89 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 PIRSF PIRSF001359 13 358 2.2E-93 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 6.1E-179 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 Gene3D G3DSA:3.20.20.70 2 358 1.8E-147 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 6.1E-110 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 SUPERFAMILY SSF51569 4 356 2.75E-131 T 12-10-2018 K04M3_27110 220b2359fb06acee63cd8ce281947bbe 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 K04M3_40640 1feab179fa652004f61498ddfe4f18e4 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_40640 1feab179fa652004f61498ddfe4f18e4 279 SUPERFAMILY SSF53850 92 273 7.29E-21 T 12-10-2018 K04M3_40640 1feab179fa652004f61498ddfe4f18e4 279 Gene3D G3DSA:3.40.190.10 90 183 1.8E-16 T 12-10-2018 K04M3_40640 1feab179fa652004f61498ddfe4f18e4 279 SUPERFAMILY SSF46785 6 87 8.68E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_40640 1feab179fa652004f61498ddfe4f18e4 279 Gene3D G3DSA:1.10.10.10 4 89 4.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_40640 1feab179fa652004f61498ddfe4f18e4 279 Pfam PF03466 LysR substrate binding domain 92 167 1.2E-12 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_47990 c5b652a0510b1c489e90fc3afdf5d15d 402 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 225 382 9.9E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_47990 c5b652a0510b1c489e90fc3afdf5d15d 402 Gene3D G3DSA:3.30.70.270 220 387 2.7E-46 T 12-10-2018 K04M3_47990 c5b652a0510b1c489e90fc3afdf5d15d 402 SUPERFAMILY SSF55073 231 385 1.1E-39 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_47990 c5b652a0510b1c489e90fc3afdf5d15d 402 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 379 1.8E-40 T 12-10-2018 IPR000160 GGDEF domain K04M3_47990 c5b652a0510b1c489e90fc3afdf5d15d 402 SMART SM00267 215 384 2.1E-45 T 12-10-2018 IPR000160 GGDEF domain K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 Gene3D G3DSA:1.20.1560.10 48 377 1.0E-23 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 Pfam PF00005 ABC transporter 420 573 5.4E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 SUPERFAMILY SSF90123 61 558 3.14E-47 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 Pfam PF00664 ABC transporter transmembrane region 82 350 4.1E-16 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 SUPERFAMILY SSF52540 393 643 1.91E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 Gene3D G3DSA:3.40.50.300 393 650 2.9E-92 T 12-10-2018 K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 SMART SM00382 428 619 1.4E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35540 51dc9fb9ab4c42dd764b404914d4461f 659 ProSitePatterns PS00211 ABC transporters family signature. 545 559 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 SUPERFAMILY SSF51246 331 451 1.78E-35 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 Gene3D G3DSA:3.30.470.130 1 456 6.4E-199 T 12-10-2018 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 9.2E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 Pfam PF00364 Biotin-requiring enzyme 603 661 1.3E-14 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 619 636 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 SMART SM00878 336 448 2.1E-48 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 SUPERFAMILY SSF52440 1 113 7.19E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 Gene3D G3DSA:2.40.50.100 598 662 1.1E-19 T 12-10-2018 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 Pfam PF02785 Biotin carboxylase C-terminal domain 336 447 1.7E-36 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 9.3E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 SUPERFAMILY SSF56059 83 343 1.08E-69 T 12-10-2018 K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 SUPERFAMILY SSF51230 585 662 1.44E-18 T 12-10-2018 IPR011053 Single hybrid motif K04M3_43840 ebde5c4c457050085dbad4f3ce17e9c2 682 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 K04M3_34000 0b821ba4f2f8efe150bf5f42145f3d8d 326 Pfam PF00581 Rhodanese-like domain 116 210 2.1E-8 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_34000 0b821ba4f2f8efe150bf5f42145f3d8d 326 SUPERFAMILY SSF52821 94 240 2.19E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_34000 0b821ba4f2f8efe150bf5f42145f3d8d 326 Gene3D G3DSA:3.30.70.100 1 96 2.0E-33 T 12-10-2018 K04M3_34000 0b821ba4f2f8efe150bf5f42145f3d8d 326 SMART SM00450 113 214 2.8E-22 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_34000 0b821ba4f2f8efe150bf5f42145f3d8d 326 Gene3D G3DSA:3.40.250.10 97 253 5.9E-52 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_34000 0b821ba4f2f8efe150bf5f42145f3d8d 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.261 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 K04M3_06230 88f77c144bfda689444925dc6a47057e 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.9E-31 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 K04M3_06230 88f77c144bfda689444925dc6a47057e 147 SUPERFAMILY SSF55961 1 143 6.14E-34 T 12-10-2018 K04M3_06230 88f77c144bfda689444925dc6a47057e 147 Gene3D G3DSA:3.30.530.20 1 143 3.0E-37 T 12-10-2018 IPR023393 START-like domain superfamily K04M3_13630 412c42203d9472cb4050403d6296cd77 227 SUPERFAMILY SSF56281 3 224 3.43E-14 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_13630 412c42203d9472cb4050403d6296cd77 227 Pfam PF14234 Domain of unknown function (DUF4336) 7 147 1.0E-14 T 12-10-2018 IPR025638 Protein of unknown function DUF4336 K04M3_13990 412c42203d9472cb4050403d6296cd77 227 SUPERFAMILY SSF56281 3 224 3.43E-14 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_13990 412c42203d9472cb4050403d6296cd77 227 Pfam PF14234 Domain of unknown function (DUF4336) 7 147 1.0E-14 T 12-10-2018 IPR025638 Protein of unknown function DUF4336 K04M3_35120 54c060454998e23a538d3da834816c8f 182 Hamap MF_01572 UPF0397 protein . 1 182 21.229 T 12-10-2018 IPR022914 Protein of unknown function UPF0397 K04M3_35120 54c060454998e23a538d3da834816c8f 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 5.2E-43 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 K04M3_35120 54c060454998e23a538d3da834816c8f 182 Gene3D G3DSA:1.10.1760.20 1 177 1.1E-18 T 12-10-2018 K04M3_33640 69214cdb230d12f62c8110fb1b2be657 436 Gene3D G3DSA:1.20.1740.10 1 435 4.5E-62 T 12-10-2018 K04M3_33640 69214cdb230d12f62c8110fb1b2be657 436 Pfam PF13520 Amino acid permease 9 414 2.1E-46 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_33640 69214cdb230d12f62c8110fb1b2be657 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 7.9E-126 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 K04M3_33640 69214cdb230d12f62c8110fb1b2be657 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 5.1E-202 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 K04M3_33640 69214cdb230d12f62c8110fb1b2be657 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.557 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 K04M3_33640 69214cdb230d12f62c8110fb1b2be657 436 PIRSF PIRSF006060 1 432 4.2E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_10510 fc3af0508ba8dd1636007e57defc0cb8 347 Pfam PF07885 Ion channel 23 102 1.0E-14 T 12-10-2018 IPR013099 Potassium channel domain K04M3_10510 fc3af0508ba8dd1636007e57defc0cb8 347 Gene3D G3DSA:3.40.50.720 112 233 1.1E-12 T 12-10-2018 K04M3_10510 fc3af0508ba8dd1636007e57defc0cb8 347 SUPERFAMILY SSF81324 23 138 1.09E-17 T 12-10-2018 K04M3_10510 fc3af0508ba8dd1636007e57defc0cb8 347 Gene3D G3DSA:1.10.287.70 5 109 2.0E-12 T 12-10-2018 K04M3_10510 fc3af0508ba8dd1636007e57defc0cb8 347 SUPERFAMILY SSF51735 121 240 2.17E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_45120 9eb656803d1d6ad1a653a2edc6a7b435 600 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 104 275 4.0E-74 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 K04M3_45120 9eb656803d1d6ad1a653a2edc6a7b435 600 SUPERFAMILY SSF53474 234 535 1.21E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_45120 9eb656803d1d6ad1a653a2edc6a7b435 600 Gene3D G3DSA:3.40.50.1820 238 526 2.5E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_45120 9eb656803d1d6ad1a653a2edc6a7b435 600 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 64 593 2.1E-250 T 12-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 3.7E-26 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.8E-219 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:3.40.50.620 25 634 1.1E-241 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF47323 657 933 1.63E-74 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 6.0E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.516 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF52374 4 652 4.59E-139 T 12-10-2018 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 SUPERFAMILY SSF50677 203 408 1.47E-54 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:1.10.730.20 645 934 2.6E-87 T 12-10-2018 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 Gene3D G3DSA:3.90.740.10 195 413 1.1E-241 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_05010 5044bd436bcd8d5bd08c377eaea72db6 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 1.3E-294 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:2.40.50.100 69 214 3.1E-49 T 12-10-2018 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 372 1.6E-37 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:2.40.30.170 60 306 3.1E-49 T 12-10-2018 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 SUPERFAMILY SSF111369 61 236 1.44E-21 T 12-10-2018 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:2.40.420.20 307 371 3.1E-49 T 12-10-2018 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 Gene3D G3DSA:1.10.287.470 106 180 3.1E-49 T 12-10-2018 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 Pfam PF13437 HlyD family secretion protein 184 293 5.0E-9 T 12-10-2018 K04M3_46540 d13900e15a36a9d98ca6509c7723026d 385 Pfam PF13533 Biotin-lipoyl like 72 120 7.7E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_10520 4744ec2b9af4b41269ee591533921d2f 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.6E-13 T 12-10-2018 IPR007140 Protein of unknown function DUF350 K04M3_10520 4744ec2b9af4b41269ee591533921d2f 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 4.8E-12 T 12-10-2018 IPR007140 Protein of unknown function DUF350 K04M3_34180 9d0649df8b19318ae5d512769a5afd3d 547 Gene3D G3DSA:1.20.1600.10 59 493 1.9E-109 T 12-10-2018 K04M3_34180 9d0649df8b19318ae5d512769a5afd3d 547 Gene3D G3DSA:2.20.200.10 106 381 1.9E-109 T 12-10-2018 K04M3_34180 9d0649df8b19318ae5d512769a5afd3d 547 SUPERFAMILY SSF56954 2 495 3.66E-94 T 12-10-2018 K04M3_34180 9d0649df8b19318ae5d512769a5afd3d 547 Pfam PF02321 Outer membrane efflux protein 311 490 7.4E-22 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_34180 9d0649df8b19318ae5d512769a5afd3d 547 Pfam PF02321 Outer membrane efflux protein 69 251 1.1E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_16370 1c12956c635cd91763719baea22df68f 208 SMART SM00945 3 117 8.3E-66 T 12-10-2018 IPR016103 ProQ/FinO domain K04M3_16370 1c12956c635cd91763719baea22df68f 208 Pfam PF04352 ProQ/FINO family 6 113 1.0E-43 T 12-10-2018 IPR016103 ProQ/FinO domain K04M3_16370 1c12956c635cd91763719baea22df68f 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 208 30.457 T 12-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 K04M3_16370 1c12956c635cd91763719baea22df68f 208 SUPERFAMILY SSF48657 4 117 9.68E-41 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily K04M3_16370 1c12956c635cd91763719baea22df68f 208 Gene3D G3DSA:1.10.1710.10 1 117 7.3E-26 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily K04M3_16370 1c12956c635cd91763719baea22df68f 208 Pfam PF17516 ProQ C-terminal domain 159 207 1.1E-22 T 12-10-2018 IPR035236 RNA chaperone ProQ, C-terminal K04M3_26420 2f1fe9dfcefe6653100af79d381a6e25 201 SUPERFAMILY SSF53955 15 164 6.14E-22 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_26420 2f1fe9dfcefe6653100af79d381a6e25 201 Gene3D G3DSA:1.10.530.10 36 196 6.3E-14 T 12-10-2018 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 Gene3D G3DSA:3.90.930.12 1 82 6.7E-31 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-74 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 SUPERFAMILY SSF56053 83 177 1.28E-35 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 SUPERFAMILY SSF56053 1 82 5.23E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 PIRSF PIRSF002162 1 177 8.2E-45 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.819 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 Gene3D G3DSA:3.90.930.12 83 177 3.5E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 Pfam PF00347 Ribosomal protein L6 91 164 3.4E-19 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02780 81f2d5106b15edc7401908ba246dbe27 177 Pfam PF00347 Ribosomal protein L6 11 82 2.8E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 Gene3D G3DSA:2.40.40.20 651 809 1.9E-46 T 12-10-2018 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.6E-26 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 SUPERFAMILY SSF53706 47 667 7.2E-165 T 12-10-2018 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 Gene3D G3DSA:3.40.228.10 178 643 2.9E-220 T 12-10-2018 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 Gene3D G3DSA:3.90.55.10 83 617 2.9E-220 T 12-10-2018 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 Gene3D G3DSA:3.40.50.740 86 566 2.9E-220 T 12-10-2018 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 SUPERFAMILY SSF50692 668 813 2.17E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 12-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 31 2.5E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_48600 aee739fdab0e05be648cd59868a1c711 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 5.1E-104 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 Gene3D G3DSA:1.10.10.10 1 79 1.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 Gene3D G3DSA:3.40.190.10 80 169 9.9E-14 T 12-10-2018 K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 Gene3D G3DSA:3.40.190.10 174 249 4.6E-8 T 12-10-2018 K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 SUPERFAMILY SSF53850 89 284 1.19E-28 T 12-10-2018 K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 SUPERFAMILY SSF46785 1 107 1.69E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 Pfam PF03466 LysR substrate binding domain 88 283 5.2E-29 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46270 eacad481cb0bf251932ac139878ee2d6 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 Gene3D G3DSA:3.20.20.70 1 466 3.5E-173 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 SUPERFAMILY SSF51569 5 302 1.54E-92 T 12-10-2018 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 597 1.1E-277 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 SUPERFAMILY SSF51230 528 602 7.59E-22 T 12-10-2018 IPR011053 Single hybrid motif K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 559 576 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 SUPERFAMILY SSF89000 300 462 9.02E-48 T 12-10-2018 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 Gene3D G3DSA:2.40.50.100 526 602 1.7E-25 T 12-10-2018 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 Pfam PF02436 Conserved carboxylase domain 295 505 3.7E-56 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 Pfam PF00682 HMGL-like 8 273 1.6E-64 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 K04M3_02440 d49c985268a1a60bbec0b298c55d0fb0 603 Pfam PF00364 Biotin-requiring enzyme 542 602 2.2E-19 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_18480 caaf3744751a09a8e0bf792b2827fd6f 416 Pfam PF00665 Integrase core domain 220 335 3.9E-30 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_18480 caaf3744751a09a8e0bf792b2827fd6f 416 SUPERFAMILY SSF53098 213 375 3.16E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_18480 caaf3744751a09a8e0bf792b2827fd6f 416 Gene3D G3DSA:3.30.420.10 193 361 8.2E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_18480 caaf3744751a09a8e0bf792b2827fd6f 416 Gene3D G3DSA:1.10.10.60 10 90 9.2E-9 T 12-10-2018 K04M3_18480 caaf3744751a09a8e0bf792b2827fd6f 416 Pfam PF01527 Transposase 4 76 1.3E-11 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 K04M3_18480 caaf3744751a09a8e0bf792b2827fd6f 416 SUPERFAMILY SSF46689 6 90 2.87E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 8 311 1.0E-102 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 SUPERFAMILY SSF53613 9 296 1.15E-69 T 12-10-2018 IPR029056 Ribokinase-like K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 8 311 4.7E-103 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 Pfam PF00294 pfkB family carbohydrate kinase 18 297 1.4E-53 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 PIRSF PIRSF000535 5 314 1.7E-97 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 42 66 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 K04M3_42260 6c62b3d0d89f0f98696c549245e34cc6 323 Gene3D G3DSA:3.40.1190.20 4 314 1.9E-95 T 12-10-2018 IPR029056 Ribokinase-like K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 195 1.4E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 189 1.9E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 Gene3D G3DSA:3.40.50.1000 5 218 2.2E-64 T 12-10-2018 IPR023214 HAD superfamily K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 2.0E-23 T 12-10-2018 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 Gene3D G3DSA:1.10.150.240 16 95 2.2E-64 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 SUPERFAMILY SSF56784 2 222 2.18E-49 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_47640 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.4E-87 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 K04M3_52350 aef150c0653cd318e16f65f0cf5577e2 546 Pfam PF03743 Bacterial conjugation TrbI-like protein 432 525 5.8E-6 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 Pfam PF01026 TatD related DNase 3 253 2.2E-78 T 12-10-2018 IPR001130 TatD family GO:0016788 K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 PIRSF PIRSF005902 1 255 1.2E-82 T 12-10-2018 IPR001130 TatD family GO:0016788 K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.2E-94 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 SUPERFAMILY SSF51556 1 253 2.14E-88 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 Gene3D G3DSA:3.20.20.140 1 255 8.2E-100 T 12-10-2018 K04M3_21020 731b2610d8246764c8c1a981bca26df8 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 K04M3_14340 0991b6c721d4a018757fd350730962b6 181 SMART SM00857 3 138 1.6E-43 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_14340 0991b6c721d4a018757fd350730962b6 181 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 K04M3_14340 0991b6c721d4a018757fd350730962b6 181 Pfam PF00239 Resolvase, N terminal domain 4 138 7.4E-35 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_14340 0991b6c721d4a018757fd350730962b6 181 Pfam PF13384 Homeodomain-like domain 145 179 2.8E-6 T 12-10-2018 K04M3_14340 0991b6c721d4a018757fd350730962b6 181 SUPERFAMILY SSF53041 1 138 1.57E-38 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 K04M3_14340 0991b6c721d4a018757fd350730962b6 181 Gene3D G3DSA:3.40.50.1390 1 121 7.1E-35 T 12-10-2018 K04M3_37270 f8067a0fdb2723d27cddda2bc5b5a0ec 294 SUPERFAMILY SSF81452 4 294 3.98E-77 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37270 f8067a0fdb2723d27cddda2bc5b5a0ec 294 Gene3D G3DSA:1.10.287.70 1 78 5.8E-17 T 12-10-2018 K04M3_37270 f8067a0fdb2723d27cddda2bc5b5a0ec 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 8.0E-48 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37270 f8067a0fdb2723d27cddda2bc5b5a0ec 294 Gene3D G3DSA:1.20.120.80 79 294 3.9E-62 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_48910 ef7115a1c96e6b2e91e447a85930dcea 392 SUPERFAMILY SSF81296 26 217 4.9E-50 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_48910 ef7115a1c96e6b2e91e447a85930dcea 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 2.5E-37 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal K04M3_48910 ef7115a1c96e6b2e91e447a85930dcea 392 Gene3D G3DSA:2.10.10.20 349 392 2.4E-18 T 12-10-2018 K04M3_48910 ef7115a1c96e6b2e91e447a85930dcea 392 Gene3D G3DSA:2.70.50.50 26 219 1.1E-64 T 12-10-2018 K04M3_48910 ef7115a1c96e6b2e91e447a85930dcea 392 SMART SM00495 349 392 1.5E-7 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_48910 ef7115a1c96e6b2e91e447a85930dcea 392 SUPERFAMILY SSF51055 342 389 1.7E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_09470 9b066fe975bcf25a5747248774d616ed 286 SUPERFAMILY SSF54637 116 283 3.3E-58 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_09470 9b066fe975bcf25a5747248774d616ed 286 Gene3D G3DSA:3.10.129.90 2 286 7.0E-107 T 12-10-2018 K04M3_09470 9b066fe975bcf25a5747248774d616ed 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.7E-61 T 12-10-2018 K04M3_09470 9b066fe975bcf25a5747248774d616ed 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 6.5E-95 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 K04M3_09470 9b066fe975bcf25a5747248774d616ed 286 SUPERFAMILY SSF54637 6 114 4.06E-40 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 Gene3D G3DSA:3.40.50.300 1 167 1.1E-29 T 12-10-2018 K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 SMART SM00487 1 178 1.2E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 Pfam PF00271 Helicase conserved C-terminal domain 240 342 4.4E-13 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 SMART SM00490 261 344 6.6E-10 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 SUPERFAMILY SSF52540 48 362 1.47E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 Gene3D G3DSA:3.40.50.300 209 367 3.9E-33 T 12-10-2018 K04M3_11760 c95a94e54ecc95b3d6d4cdc7ea8f6fab 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 7.6E-24 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 K04M3_17440 131f7d7bf01c9eec0a98b7601298a758 212 SUPERFAMILY SSF160527 98 205 9.68E-5 T 12-10-2018 K04M3_17440 131f7d7bf01c9eec0a98b7601298a758 212 Pfam PF02108 Flagellar assembly protein FliH 77 194 8.4E-18 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE K04M3_17440 131f7d7bf01c9eec0a98b7601298a758 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 4.5E-43 T 12-10-2018 IPR012842 Type III secretion system HrpE/YscL K04M3_31040 788c0450eb9fcdc4a67a0e07b2305141 199 Gene3D G3DSA:3.40.50.150 6 199 9.5E-65 T 12-10-2018 K04M3_31040 788c0450eb9fcdc4a67a0e07b2305141 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 6.7E-63 T 12-10-2018 K04M3_31040 788c0450eb9fcdc4a67a0e07b2305141 199 SUPERFAMILY SSF53335 19 196 4.08E-56 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_31040 788c0450eb9fcdc4a67a0e07b2305141 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 8.1E-60 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 K04M3_31040 788c0450eb9fcdc4a67a0e07b2305141 199 PIRSF PIRSF004553 18 198 1.5E-56 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 K04M3_09520 1e1017640e8ef4d59aa4a19bf276c4ec 244 Gene3D G3DSA:3.40.1280.10 96 244 4.5E-40 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_09520 1e1017640e8ef4d59aa4a19bf276c4ec 244 SUPERFAMILY SSF55315 4 93 2.21E-11 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like K04M3_09520 1e1017640e8ef4d59aa4a19bf276c4ec 244 Gene3D G3DSA:3.30.1330.30 1 94 4.7E-17 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like K04M3_09520 1e1017640e8ef4d59aa4a19bf276c4ec 244 SUPERFAMILY SSF75217 95 243 5.43E-34 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_09520 1e1017640e8ef4d59aa4a19bf276c4ec 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 3.3E-29 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 K04M3_01330 d21e2e03e27d0bb26677771754b1c834 241 Pfam PF00156 Phosphoribosyl transferase domain 145 238 5.9E-11 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 K04M3_01330 d21e2e03e27d0bb26677771754b1c834 241 Gene3D G3DSA:3.40.50.2020 104 241 4.5E-17 T 12-10-2018 K04M3_01330 d21e2e03e27d0bb26677771754b1c834 241 SUPERFAMILY SSF53271 66 239 5.38E-34 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_08760 117d25212391f2a2bca0c168a76d7b48 563 SUPERFAMILY SSF53335 5 169 1.88E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_08760 117d25212391f2a2bca0c168a76d7b48 563 Pfam PF13489 Methyltransferase domain 35 169 1.1E-11 T 12-10-2018 K04M3_08760 117d25212391f2a2bca0c168a76d7b48 563 Gene3D G3DSA:3.40.50.150 2 195 3.1E-26 T 12-10-2018 K04M3_08850 833e18665e6d7f4d88846fe03ecf6019 517 Gene3D G3DSA:1.10.275.10 9 203 6.8E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal K04M3_08850 833e18665e6d7f4d88846fe03ecf6019 517 Pfam PF00221 Aromatic amino acid lyase 16 469 1.6E-164 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 K04M3_08850 833e18665e6d7f4d88846fe03ecf6019 517 Gene3D G3DSA:1.20.200.10 204 511 1.3E-101 T 12-10-2018 K04M3_08850 833e18665e6d7f4d88846fe03ecf6019 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 K04M3_08850 833e18665e6d7f4d88846fe03ecf6019 517 SUPERFAMILY SSF48557 5 513 5.42E-173 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 K04M3_33490 4c047fe1f3573d9bf57a6f97d54e6327 361 Gene3D G3DSA:2.40.160.10 24 361 3.5E-58 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_33490 4c047fe1f3573d9bf57a6f97d54e6327 361 SUPERFAMILY SSF56935 26 361 2.88E-49 T 12-10-2018 K04M3_32870 adad5af9910d67df2c095d9c7baa41a7 318 Gene3D G3DSA:1.10.10.10 3 89 1.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32870 adad5af9910d67df2c095d9c7baa41a7 318 SUPERFAMILY SSF46785 3 112 5.16E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_32870 adad5af9910d67df2c095d9c7baa41a7 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_32870 adad5af9910d67df2c095d9c7baa41a7 318 Pfam PF03466 LysR substrate binding domain 89 293 2.0E-38 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_32870 adad5af9910d67df2c095d9c7baa41a7 318 SUPERFAMILY SSF53850 90 297 2.64E-42 T 12-10-2018 K04M3_32870 adad5af9910d67df2c095d9c7baa41a7 318 Gene3D G3DSA:3.40.190.290 91 294 5.2E-61 T 12-10-2018 K04M3_31180 00d71c4d2277e1295b749acd223da70f 336 SUPERFAMILY SSF53474 42 324 1.62E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_31180 00d71c4d2277e1295b749acd223da70f 336 Gene3D G3DSA:3.40.50.1820 29 328 1.1E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_31180 00d71c4d2277e1295b749acd223da70f 336 Pfam PF12146 Serine aminopeptidase, S33 53 310 8.7E-59 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.5E-31 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.491 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 Gene3D G3DSA:1.10.287.1080 120 211 9.5E-30 T 12-10-2018 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.654 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-22 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 SUPERFAMILY SSF141734 12 122 2.22E-45 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 4.4E-18 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 7.1E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 SUPERFAMILY SSF101386 123 210 1.72E-25 T 12-10-2018 K04M3_11170 ea803efed0cf5dd7c4f3143268720577 211 Gene3D G3DSA:3.10.20.400 3 102 8.9E-37 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 SMART SM00267 265 442 4.8E-29 T 12-10-2018 IPR000160 GGDEF domain K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 Pfam PF00563 EAL domain 458 694 1.6E-73 T 12-10-2018 IPR001633 EAL domain K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 436 5.5E-32 T 12-10-2018 IPR000160 GGDEF domain K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 SUPERFAMILY SSF141868 467 706 1.06E-83 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 SUPERFAMILY SSF55073 281 444 4.08E-32 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 440 9.4E-28 T 12-10-2018 IPR000160 GGDEF domain K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 Gene3D G3DSA:3.20.20.450 454 710 2.6E-92 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 Gene3D G3DSA:3.30.70.270 273 453 6.8E-43 T 12-10-2018 K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 SMART SM00052 452 699 1.7E-105 T 12-10-2018 IPR001633 EAL domain K04M3_14190 0af81bf20f8f892911973cc25f01f26d 718 Gene3D G3DSA:1.20.1480.50 179 272 2.8E-6 T 12-10-2018 K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 SMART SM00470 40 130 5.6E-35 T 12-10-2018 IPR003115 ParB/Sulfiredoxin K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 Pfam PF02195 ParB-like nuclease domain 43 130 1.9E-28 T 12-10-2018 IPR003115 ParB/Sulfiredoxin K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 2.5E-56 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 SUPERFAMILY SSF110849 41 132 1.6E-27 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 SUPERFAMILY SSF109709 122 229 1.75E-32 T 12-10-2018 K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 Gene3D G3DSA:3.90.1530.30 53 116 1.7E-26 T 12-10-2018 K04M3_32310 bcff0562ead1fbabf1f57f5f9bef993c 293 Gene3D G3DSA:1.10.10.2830 117 230 1.7E-34 T 12-10-2018 K04M3_38890 e25e48079f13e9ef0f47c3edfa5f3809 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 9.6E-24 T 12-10-2018 IPR005175 PPC domain K04M3_38890 e25e48079f13e9ef0f47c3edfa5f3809 134 Gene3D G3DSA:3.30.1330.80 2 134 1.5E-47 T 12-10-2018 K04M3_38890 e25e48079f13e9ef0f47c3edfa5f3809 134 SUPERFAMILY SSF117856 4 131 2.01E-37 T 12-10-2018 K04M3_43540 b92416f512202287175004fb0e47e6bf 171 Gene3D G3DSA:3.30.160.670 11 170 9.7E-25 T 12-10-2018 K04M3_43540 b92416f512202287175004fb0e47e6bf 171 Pfam PF13590 Domain of unknown function (DUF4136) 19 168 6.1E-24 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Gene3D G3DSA:2.30.40.20 43 89 3.7E-35 T 12-10-2018 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Gene3D G3DSA:3.30.1490.100 255 367 3.5E-6 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Gene3D G3DSA:3.30.70.270 23 187 3.7E-35 T 12-10-2018 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Gene3D G3DSA:1.10.150.20 188 236 3.7E-35 T 12-10-2018 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 SUPERFAMILY SSF100879 259 353 8.63E-6 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Pfam PF13438 Domain of unknown function (DUF4113) 378 426 1.1E-12 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Pfam PF11799 impB/mucB/samB family C-terminal domain 252 363 2.1E-11 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 SUPERFAMILY SSF56672 20 247 9.78E-51 T 12-10-2018 K04M3_52130 737811bb2cd75edd11d5e9519378a8d2 428 Pfam PF00817 impB/mucB/samB family 24 167 7.9E-26 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_25290 61f85926662d0739743c8ed90853c7ca 225 Gene3D G3DSA:3.90.70.10 37 188 2.7E-32 T 12-10-2018 K04M3_25290 61f85926662d0739743c8ed90853c7ca 225 Pfam PF03412 Peptidase C39 family 46 181 5.1E-21 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 K04M3_10740 185c4d70bbcd9251f3408f086d2e27ba 542 SMART SM00283 280 541 1.2E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_10740 185c4d70bbcd9251f3408f086d2e27ba 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 507 3.6E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_10740 185c4d70bbcd9251f3408f086d2e27ba 542 SUPERFAMILY SSF58104 241 542 1.23E-71 T 12-10-2018 K04M3_10740 185c4d70bbcd9251f3408f086d2e27ba 542 Gene3D G3DSA:1.10.287.950 211 542 9.8E-75 T 12-10-2018 K04M3_10740 185c4d70bbcd9251f3408f086d2e27ba 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 182 9.3E-21 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain K04M3_40130 333fecdeab2c26064ccc3bcf9c572c3f 169 Gene3D G3DSA:3.40.630.30 1 166 5.8E-40 T 12-10-2018 K04M3_40130 333fecdeab2c26064ccc3bcf9c572c3f 169 SUPERFAMILY SSF55729 2 156 5.23E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_40130 333fecdeab2c26064ccc3bcf9c572c3f 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 1.3E-25 T 12-10-2018 IPR000182 GNAT domain K04M3_24510 fe4e0a4517b4913a8a8ed3475dc1c702 143 Pfam PF13673 Acetyltransferase (GNAT) domain 54 126 7.5E-18 T 12-10-2018 IPR000182 GNAT domain K04M3_24510 fe4e0a4517b4913a8a8ed3475dc1c702 143 Gene3D G3DSA:3.40.630.30 3 143 1.4E-31 T 12-10-2018 K04M3_24510 fe4e0a4517b4913a8a8ed3475dc1c702 143 SUPERFAMILY SSF55729 2 142 1.95E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_00960 12a6156e0d5d7f87936a57572940bf17 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.7E-74 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 K04M3_00960 12a6156e0d5d7f87936a57572940bf17 219 Gene3D G3DSA:3.40.50.300 3 201 2.4E-58 T 12-10-2018 K04M3_00960 12a6156e0d5d7f87936a57572940bf17 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.588 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 K04M3_00960 12a6156e0d5d7f87936a57572940bf17 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.1E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_00960 12a6156e0d5d7f87936a57572940bf17 219 SUPERFAMILY SSF52540 16 205 6.37E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09910 899510f7945f259b93c2c84795d1d5c6 225 SUPERFAMILY SSF161098 11 203 6.02E-41 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_09910 899510f7945f259b93c2c84795d1d5c6 225 Gene3D G3DSA:1.10.3720.10 1 218 1.3E-49 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_09910 899510f7945f259b93c2c84795d1d5c6 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 1.5E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_09910 899510f7945f259b93c2c84795d1d5c6 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 217 9.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_43170 616f8053c25a8b0c3739370bc0320d35 515 Pfam PF14707 C-terminal region of aryl-sulfatase 396 470 6.4E-8 T 12-10-2018 K04M3_43170 616f8053c25a8b0c3739370bc0320d35 515 Pfam PF00884 Sulfatase 31 356 3.4E-61 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_43170 616f8053c25a8b0c3739370bc0320d35 515 SUPERFAMILY SSF53649 27 507 9.45E-127 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_43170 616f8053c25a8b0c3739370bc0320d35 515 Gene3D G3DSA:3.30.1120.10 398 463 4.2E-101 T 12-10-2018 K04M3_43170 616f8053c25a8b0c3739370bc0320d35 515 Gene3D G3DSA:3.40.720.10 31 397 4.2E-101 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_31590 e0343a1a4fe744c372291f91a4ab50d5 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 2.1E-23 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane K04M3_02270 b1023f4cea9cce2f80707e9886cea8db 116 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 6.0E-34 T 12-10-2018 IPR021482 Protein of unknown function DUF3135 K04M3_11630 e9e0818d620c3c74ec40ee4ee459525b 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 K04M3_11630 e9e0818d620c3c74ec40ee4ee459525b 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.5E-9 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 K04M3_11630 e9e0818d620c3c74ec40ee4ee459525b 203 Gene3D G3DSA:1.20.120.1760 4 199 8.1E-21 T 12-10-2018 K04M3_35320 853f2658b27f66e943fef0b495056178 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 7.8E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_35320 853f2658b27f66e943fef0b495056178 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 2.3E-91 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 K04M3_35320 853f2658b27f66e943fef0b495056178 310 SUPERFAMILY SSF161098 34 305 6.02E-36 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35320 853f2658b27f66e943fef0b495056178 310 Gene3D G3DSA:1.10.3720.10 87 309 2.6E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 SUPERFAMILY SSF52540 337 582 3.16E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 SMART SM00382 371 557 1.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.0E-49 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 Pfam PF00005 ABC transporter 363 511 2.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 SUPERFAMILY SSF90123 14 324 2.49E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 Gene3D G3DSA:1.20.1560.10 9 332 1.3E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 Gene3D G3DSA:3.40.50.300 336 585 1.1E-94 T 12-10-2018 K04M3_42490 8cf227c2f0db727f636eccc936c1d3fb 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 2.3E-281 T 12-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein K04M3_33650 00436631b8bd312bbed93df480631aaa 62 SUPERFAMILY SSF89447 1 48 2.27E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily K04M3_33650 00436631b8bd312bbed93df480631aaa 62 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 1.7E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 K04M3_33650 00436631b8bd312bbed93df480631aaa 62 SMART SM00966 6 49 1.2E-5 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 K04M3_33650 00436631b8bd312bbed93df480631aaa 62 Gene3D G3DSA:2.10.260.10 2 46 7.9E-7 T 12-10-2018 K04M3_33650 00436631b8bd312bbed93df480631aaa 62 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 45 8.4E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 SUPERFAMILY SSF51735 1 335 1.58E-98 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.1E-141 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 9.8E-6 T 12-10-2018 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 9.8E-6 T 12-10-2018 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 9.8E-6 T 12-10-2018 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 Gene3D G3DSA:3.40.50.720 3 273 7.3E-141 T 12-10-2018 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 Gene3D G3DSA:3.90.25.10 193 328 7.3E-141 T 12-10-2018 K04M3_41640 3b9f9aded98aa972d0c3d7d4e39788f3 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 3.3E-61 T 12-10-2018 IPR016040 NAD(P)-binding domain K04M3_49050 97ea48acd23ae71d209f4503400d52ae 295 Gene3D G3DSA:3.40.190.290 90 289 2.6E-63 T 12-10-2018 K04M3_49050 97ea48acd23ae71d209f4503400d52ae 295 SUPERFAMILY SSF46785 6 111 7.05E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_49050 97ea48acd23ae71d209f4503400d52ae 295 SUPERFAMILY SSF53850 88 294 2.58E-46 T 12-10-2018 K04M3_49050 97ea48acd23ae71d209f4503400d52ae 295 Pfam PF03466 LysR substrate binding domain 87 289 9.0E-42 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_49050 97ea48acd23ae71d209f4503400d52ae 295 Gene3D G3DSA:1.10.10.10 3 88 3.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_49050 97ea48acd23ae71d209f4503400d52ae 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_02900 a6b7d022e67dba01f40c1086153755b8 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 18 152 2.1E-31 T 12-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE K04M3_16950 d56603e3aab53cc19afc43a2d2db691c 194 Pfam PF01810 LysE type translocator 14 193 5.7E-15 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_43620 bf94d4091a5a6d4003b2fef491158c91 458 SUPERFAMILY SSF141322 386 451 3.4E-8 T 12-10-2018 K04M3_43620 bf94d4091a5a6d4003b2fef491158c91 458 Gene3D G3DSA:2.40.50.140 388 458 4.3E-13 T 12-10-2018 K04M3_43620 bf94d4091a5a6d4003b2fef491158c91 458 SUPERFAMILY SSF52096 5 215 2.71E-28 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_43620 bf94d4091a5a6d4003b2fef491158c91 458 Gene3D G3DSA:3.90.226.10 15 265 2.2E-62 T 12-10-2018 K04M3_43620 bf94d4091a5a6d4003b2fef491158c91 458 Pfam PF01957 NfeD-like C-terminal, partner-binding 314 453 6.8E-35 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain K04M3_32080 35664ba9c4a95e291be3e51c6adc9c88 292 SUPERFAMILY SSF69593 47 288 5.75E-27 T 12-10-2018 K04M3_32080 35664ba9c4a95e291be3e51c6adc9c88 292 Pfam PF01553 Acyltransferase 72 226 2.8E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_32080 35664ba9c4a95e291be3e51c6adc9c88 292 SMART SM00563 85 227 6.6E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_01580 79259f75e3c1311acea0976573149bcb 285 SMART SM00382 35 244 1.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_01580 79259f75e3c1311acea0976573149bcb 285 SUPERFAMILY SSF52540 6 257 6.66E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_01580 79259f75e3c1311acea0976573149bcb 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 275 3.8E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_01580 79259f75e3c1311acea0976573149bcb 285 Pfam PF00005 ABC transporter 26 186 1.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_01580 79259f75e3c1311acea0976573149bcb 285 Gene3D G3DSA:3.40.50.300 4 282 2.2E-88 T 12-10-2018 K04M3_01580 79259f75e3c1311acea0976573149bcb 285 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 3.9E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Gene3D G3DSA:1.20.1330.10 195 327 2.2E-18 T 12-10-2018 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Pfam PF07196 Flagellin hook IN motif 199 247 1.3E-9 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-41 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 SUPERFAMILY SSF64518 1 375 3.53E-95 T 12-10-2018 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Gene3D G3DSA:1.20.58.1830 5 33 4.4E-71 T 12-10-2018 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Gene3D G3DSA:1.20.1330.10 45 178 4.4E-71 T 12-10-2018 K04M3_22970 0a26b900f32912a58091ee9577aec960 376 Gene3D G3DSA:1.10.8.410 328 375 1.8E-20 T 12-10-2018 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.259 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 42 192 1.6E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 SUPERFAMILY SSF55068 33 205 1.31E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 SUPERFAMILY SSF51316 240 379 2.77E-58 T 12-10-2018 IPR011057 Mss4-like superfamily K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.732 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 Pfam PF01641 SelR domain 243 362 4.7E-46 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 1.6E-56 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 Gene3D G3DSA:2.170.150.20 233 380 2.0E-55 T 12-10-2018 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 Gene3D G3DSA:3.30.1060.10 21 199 3.0E-62 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_47730 97b5a02ca52faefbd8f85c30af601663 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 239 371 1.3E-57 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 K04M3_40720 eb07cf58abeba17d45e69e03b0bebd45 637 SUPERFAMILY SSF53098 244 443 7.4E-14 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_40720 eb07cf58abeba17d45e69e03b0bebd45 637 Gene3D G3DSA:3.30.420.10 237 451 3.0E-19 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_40720 eb07cf58abeba17d45e69e03b0bebd45 637 Pfam PF00665 Integrase core domain 244 375 4.9E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_40720 eb07cf58abeba17d45e69e03b0bebd45 637 Pfam PF09039 Mu DNA binding, I gamma subdomain 150 225 1.7E-4 T 12-10-2018 IPR015126 Mu DNA binding, I gamma subdomain K04M3_02950 653b54ae443bb11cd878e6f433e5cb58 192 Gene3D G3DSA:2.60.120.10 2 140 4.6E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_02950 653b54ae443bb11cd878e6f433e5cb58 192 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 6.2E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_02950 653b54ae443bb11cd878e6f433e5cb58 192 SUPERFAMILY SSF51206 18 139 4.06E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 6.2E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.4E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.4E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.4E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.2E-60 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 Gene3D G3DSA:3.10.20.30 1 112 2.9E-36 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 K04M3_05760 6a385cc0f923178c4c39e71dfc8e3211 112 SUPERFAMILY SSF54292 5 107 2.77E-32 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_49040 f20b178e00b5308e0fb1c17c777a0817 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 1.1E-61 T 12-10-2018 K04M3_49040 f20b178e00b5308e0fb1c17c777a0817 267 SUPERFAMILY SSF56784 5 264 3.49E-67 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_49040 f20b178e00b5308e0fb1c17c777a0817 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 4.4E-52 T 12-10-2018 IPR000150 Cof family GO:0016787 K04M3_49040 f20b178e00b5308e0fb1c17c777a0817 267 Gene3D G3DSA:3.40.50.1000 9 260 2.0E-78 T 12-10-2018 IPR023214 HAD superfamily K04M3_49040 f20b178e00b5308e0fb1c17c777a0817 267 Gene3D G3DSA:3.30.1240.10 85 190 2.0E-78 T 12-10-2018 K04M3_49040 f20b178e00b5308e0fb1c17c777a0817 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 8.9E-24 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 K04M3_32180 6209c648ac4ba7d3f04afbfcce5e865d 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site K04M3_32180 6209c648ac4ba7d3f04afbfcce5e865d 258 Gene3D G3DSA:3.40.190.10 25 244 2.4E-63 T 12-10-2018 K04M3_32180 6209c648ac4ba7d3f04afbfcce5e865d 258 Gene3D G3DSA:3.40.190.10 120 211 2.4E-63 T 12-10-2018 K04M3_32180 6209c648ac4ba7d3f04afbfcce5e865d 258 SUPERFAMILY SSF53850 1 256 5.7E-51 T 12-10-2018 K04M3_32180 6209c648ac4ba7d3f04afbfcce5e865d 258 SMART SM00062 33 257 3.8E-39 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_32180 6209c648ac4ba7d3f04afbfcce5e865d 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 4.1E-38 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_21670 0a52d1ada8c1d71ca0bb47372b51e605 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 1.0E-70 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 K04M3_21670 0a52d1ada8c1d71ca0bb47372b51e605 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.3E-76 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 7.2E-94 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 Gene3D G3DSA:3.30.950.10 153 290 1.6E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 Gene3D G3DSA:3.40.1010.10 36 152 9.7E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 117 150 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 248 6.3E-46 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 K04M3_02970 bcec2c8bfed9e067860ca66e12e1d504 291 SUPERFAMILY SSF53790 33 280 8.51E-80 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 K04M3_24830 e32e90437bfa0ab961ad6a9a8a2ca529 199 Pfam PF01965 DJ-1/PfpI family 3 169 2.1E-39 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 K04M3_24830 e32e90437bfa0ab961ad6a9a8a2ca529 199 Gene3D G3DSA:3.40.50.880 1 190 9.9E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_24830 e32e90437bfa0ab961ad6a9a8a2ca529 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 3.6E-63 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 K04M3_24830 e32e90437bfa0ab961ad6a9a8a2ca529 199 SUPERFAMILY SSF52317 3 189 4.09E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_48170 57f8540cfa6bb6f71757d41ccdd994f4 291 Gene3D G3DSA:3.40.50.1980 67 190 1.2E-6 T 12-10-2018 K04M3_48170 57f8540cfa6bb6f71757d41ccdd994f4 291 SUPERFAMILY SSF53807 28 262 6.28E-19 T 12-10-2018 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 PIRSF PIRSF000151 1 411 4.4E-164 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 5 400 8.1E-166 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 SUPERFAMILY SSF53720 2 403 3.4E-110 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 Gene3D G3DSA:3.40.309.10 218 368 2.5E-151 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 Pfam PF00171 Aldehyde dehydrogenase family 3 274 2.5E-14 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 Gene3D G3DSA:3.40.605.10 10 403 2.5E-151 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_06550 48b954e07d2b8e5a86ff3ce454a7bc14 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 37.992 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 K04M3_42150 7c01b5059564776de37b6e47a056e567 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 1.2E-82 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 K04M3_42150 7c01b5059564776de37b6e47a056e567 382 Gene3D G3DSA:3.40.50.1970 1 180 2.9E-51 T 12-10-2018 K04M3_42150 7c01b5059564776de37b6e47a056e567 382 SUPERFAMILY SSF56796 2 378 3.66E-99 T 12-10-2018 K04M3_42150 7c01b5059564776de37b6e47a056e567 382 Gene3D G3DSA:1.20.1090.10 181 380 2.1E-33 T 12-10-2018 K04M3_03220 9b7b205b410eebfe667f6d38721a380d 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_03220 9b7b205b410eebfe667f6d38721a380d 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 1.0E-101 T 12-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 K04M3_03220 9b7b205b410eebfe667f6d38721a380d 234 SMART SM00382 24 209 5.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_03220 9b7b205b410eebfe667f6d38721a380d 234 Gene3D G3DSA:3.40.50.300 1 231 4.3E-61 T 12-10-2018 K04M3_03220 9b7b205b410eebfe667f6d38721a380d 234 SUPERFAMILY SSF52540 1 231 5.33E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03220 9b7b205b410eebfe667f6d38721a380d 234 Pfam PF00005 ABC transporter 18 157 7.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_25060 0a13390cf4285708b808091c3be4d2f0 607 Gene3D G3DSA:3.40.720.10 238 528 1.2E-52 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_25060 0a13390cf4285708b808091c3be4d2f0 607 Pfam PF00884 Sulfatase 250 521 1.1E-32 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_25060 0a13390cf4285708b808091c3be4d2f0 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 1.4E-49 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal K04M3_25060 0a13390cf4285708b808091c3be4d2f0 607 SUPERFAMILY SSF53649 247 571 7.11E-60 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_25060 0a13390cf4285708b808091c3be4d2f0 607 PIRSF PIRSF004950 1 606 5.4E-232 T 12-10-2018 IPR012159 Inner membrane protein YejM K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 1.3E-186 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 SUPERFAMILY SSF53383 117 574 2.79E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Gene3D G3DSA:3.90.1150.10 429 607 1.0E-67 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 SUPERFAMILY SSF52172 1 116 5.96E-25 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 PIRSF PIRSF009393 1 726 9.0E-289 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 12-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 SUPERFAMILY SSF55904 578 725 2.35E-44 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Gene3D G3DSA:3.40.640.10 117 427 1.3E-84 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Gene3D G3DSA:3.90.100.10 608 726 8.8E-42 T 12-10-2018 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 111 2.3E-13 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 1.7E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 K04M3_33630 64d5ee1a2a14e9634ce334974c40d15b 726 Gene3D G3DSA:3.40.50.220 22 116 1.6E-12 T 12-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 K04M3_19700 4383273c6eec6b5f3a13c90f04d8c872 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 1.3E-70 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 K04M3_19700 4383273c6eec6b5f3a13c90f04d8c872 363 PIRSF PIRSF039026 3 362 3.4E-144 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like K04M3_19700 4383273c6eec6b5f3a13c90f04d8c872 363 Gene3D G3DSA:3.40.190.170 38 348 4.6E-118 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily K04M3_19700 4383273c6eec6b5f3a13c90f04d8c872 363 Gene3D G3DSA:3.40.190.10 156 327 4.6E-118 T 12-10-2018 K04M3_43830 fbeba3bec1afa8b32e55ac4e8b3fd6f3 260 Gene3D G3DSA:3.90.226.10 2 199 1.1E-61 T 12-10-2018 K04M3_43830 fbeba3bec1afa8b32e55ac4e8b3fd6f3 260 SUPERFAMILY SSF52096 4 258 5.71E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_43830 fbeba3bec1afa8b32e55ac4e8b3fd6f3 260 Gene3D G3DSA:1.10.12.10 201 260 4.2E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal K04M3_43830 fbeba3bec1afa8b32e55ac4e8b3fd6f3 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 1.9E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 5.3E-28 T 12-10-2018 K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 5.3E-28 T 12-10-2018 K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.3E-28 T 12-10-2018 K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 5.3E-28 T 12-10-2018 K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 Gene3D G3DSA:3.40.50.720 1 334 1.1E-98 T 12-10-2018 K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.3E-55 T 12-10-2018 IPR016040 NAD(P)-binding domain K04M3_02220 46cf63350c54e34f09c92d62c54f48ba 334 SUPERFAMILY SSF51735 1 333 1.18E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.30.170 114 127 4.5E-9 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 5.1E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Pfam PF11604 Copper binding periplasmic protein CusF 499 563 1.0E-18 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.50.100 128 162 4.5E-9 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:1.10.287.470 163 175 4.5E-9 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.30.170 247 320 5.1E-29 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 7.7E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.50.100 205 246 5.1E-29 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 208 392 1.8E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.420.20 326 415 1.5E-22 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.420.20 102 113 4.5E-9 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 SUPERFAMILY SSF111369 133 324 2.22E-17 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.50.320 495 565 5.6E-16 T 12-10-2018 K04M3_36650 3082504ee005ca1feb7463e6924da96d 572 Gene3D G3DSA:2.40.50.320 416 485 9.0E-20 T 12-10-2018 K04M3_52780 11e2a8beeeaaf4631f86226a1a20cdf0 1142 Gene3D G3DSA:3.40.50.620 36 252 3.3E-17 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_52780 11e2a8beeeaaf4631f86226a1a20cdf0 1142 SUPERFAMILY SSF52402 57 251 3.56E-8 T 12-10-2018 K04M3_52780 11e2a8beeeaaf4631f86226a1a20cdf0 1142 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 58 248 1.5E-5 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 K04M3_16230 181a131f9b30f67a813ebadc9d5a8f3e 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.3E-26 T 12-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain K04M3_16230 181a131f9b30f67a813ebadc9d5a8f3e 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 5.0E-71 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 K04M3_16230 181a131f9b30f67a813ebadc9d5a8f3e 149 Gene3D G3DSA:1.10.1220.10 98 149 3.2E-22 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 K04M3_16230 181a131f9b30f67a813ebadc9d5a8f3e 149 Gene3D G3DSA:1.20.1270.380 1 89 9.3E-48 T 12-10-2018 IPR038339 MatP, N-terminal domain superfamily K04M3_16230 181a131f9b30f67a813ebadc9d5a8f3e 149 Pfam PF06303 MatP N-terminal domain 2 85 3.6E-42 T 12-10-2018 IPR035087 MatP, N-terminal K04M3_16230 181a131f9b30f67a813ebadc9d5a8f3e 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.022 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 SUPERFAMILY SSF51717 357 631 1.14E-87 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Gene3D G3DSA:1.10.288.10 938 1094 2.4E-144 T 12-10-2018 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 SUPERFAMILY SSF82282 8 400 1.27E-118 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 SMART SM01018 658 741 1.1E-45 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Pfam PF02310 B12 binding domain 749 842 4.4E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 SUPERFAMILY SSF47644 654 740 3.53E-29 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.8E-59 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 SUPERFAMILY SSF56507 903 1225 1.44E-131 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 SUPERFAMILY SSF52242 746 895 6.41E-46 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.5E-122 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Gene3D G3DSA:3.20.20.20 341 643 3.4E-130 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Gene3D G3DSA:3.20.20.330 2 340 1.7E-129 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Gene3D G3DSA:1.10.1240.10 650 738 1.9E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 4.3E-81 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 PIRSF PIRSF000381 3 1197 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Gene3D G3DSA:3.10.196.10 909 1224 2.4E-144 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Pfam PF02607 B12 binding domain 660 734 1.0E-25 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 K04M3_28490 575a976b2e03db6893bbf2f702d2176f 1226 Gene3D G3DSA:3.40.50.280 745 896 3.5E-57 T 12-10-2018 K04M3_35580 5d436915d2137862dfc4c7505e4b421b 454 Pfam PF02386 Cation transport protein 50 437 3.6E-56 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 K04M3_35580 5d436915d2137862dfc4c7505e4b421b 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 426 3.0E-107 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 419 3.4E-177 T 12-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 Gene3D G3DSA:1.25.40.80 135 294 1.6E-47 T 12-10-2018 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 Gene3D G3DSA:3.40.50.620 1 134 4.3E-23 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 PRINTS PR00147 DNA photolyase signature 341 359 1.2E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 PRINTS PR00147 DNA photolyase signature 321 337 1.2E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 PRINTS PR00147 DNA photolyase signature 380 394 1.2E-11 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 Pfam PF00875 DNA photolyase 7 163 7.6E-27 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 Pfam PF03441 FAD binding domain of DNA photolyase 274 417 1.8E-41 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 SUPERFAMILY SSF52425 2 189 9.68E-37 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 Gene3D G3DSA:1.10.579.10 296 431 1.3E-51 T 12-10-2018 K04M3_47760 e040f7c9d39b68f2c8d79db2358db608 450 SUPERFAMILY SSF48173 198 419 1.1E-69 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 Pfam PF14526 Integron-associated effector binding protein 142 302 7.8E-19 T 12-10-2018 IPR029441 Integron-associated effector binding protein K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 9.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 9.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 SMART SM00871 139 303 1.7E-19 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 SUPERFAMILY SSF55136 140 304 3.66E-23 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 SUPERFAMILY SSF46689 65 115 3.58E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 Gene3D G3DSA:3.20.80.10 139 307 4.1E-31 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 Gene3D G3DSA:1.10.10.60 4 64 1.7E-20 T 12-10-2018 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 Pfam PF12833 Helix-turn-helix domain 35 112 1.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 SMART SM00342 28 111 5.8E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 Gene3D G3DSA:1.10.10.60 65 126 1.0E-13 T 12-10-2018 K04M3_17670 2458b1203ce5aa9d5877de24a50d8d42 321 SUPERFAMILY SSF46689 11 62 5.38E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_38110 e7299b25947f2a12dc7966dcdc8fc732 404 SUPERFAMILY SSF52540 3 304 3.32E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_38110 e7299b25947f2a12dc7966dcdc8fc732 404 SMART SM00833 252 372 1.2E-30 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal K04M3_38110 e7299b25947f2a12dc7966dcdc8fc732 404 Gene3D G3DSA:3.40.50.300 2 218 7.4E-41 T 12-10-2018 K04M3_38110 e7299b25947f2a12dc7966dcdc8fc732 404 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 371 1.1E-17 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal K04M3_38110 e7299b25947f2a12dc7966dcdc8fc732 404 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 203 1.0E-27 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain K04M3_21620 51824a5f50f00ec617ba952c1060671a 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.006 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 K04M3_21620 51824a5f50f00ec617ba952c1060671a 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.5E-105 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 K04M3_21620 51824a5f50f00ec617ba952c1060671a 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.4E-139 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 Pfam PF00579 tRNA synthetases class I (W and Y) 31 325 9.5E-81 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 Gene3D G3DSA:1.10.240.10 225 327 1.5E-36 T 12-10-2018 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 Gene3D G3DSA:3.10.290.10 328 419 1.9E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 416 7.6E-124 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 SUPERFAMILY SSF52374 3 325 3.43E-101 T 12-10-2018 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 SUPERFAMILY SSF55174 323 416 1.7E-13 T 12-10-2018 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 Gene3D G3DSA:3.40.50.620 2 224 3.6E-88 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 417 43.991 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 9.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_46340 80ad8d94a1dd874a5f54d5801b7da917 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_08670 648bc57174b8572daddf630769fe3ea7 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.907 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 K04M3_08670 648bc57174b8572daddf630769fe3ea7 87 Gene3D G3DSA:3.30.1070.10 1 84 2.4E-26 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 K04M3_08670 648bc57174b8572daddf630769fe3ea7 87 SUPERFAMILY SSF55229 33 86 6.28E-17 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 K04M3_08670 648bc57174b8572daddf630769fe3ea7 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.9E-24 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 K04M3_08670 648bc57174b8572daddf630769fe3ea7 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 4.5E-34 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 K04M3_00590 38206c7ca920d8f7537f4f2696ba78ed 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.393 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 K04M3_00590 38206c7ca920d8f7537f4f2696ba78ed 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.8E-116 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 K04M3_00590 38206c7ca920d8f7537f4f2696ba78ed 279 Gene3D G3DSA:3.40.50.150 1 279 9.8E-116 T 12-10-2018 K04M3_00590 38206c7ca920d8f7537f4f2696ba78ed 279 SUPERFAMILY SSF53335 9 273 7.59E-96 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_05240 ff27966778c359773479b99db225045b 493 SUPERFAMILY SSF53850 38 268 1.76E-37 T 12-10-2018 K04M3_05240 ff27966778c359773479b99db225045b 493 Pfam PF01464 Transglycosylase SLT domain 302 414 2.6E-22 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_05240 ff27966778c359773479b99db225045b 493 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 263 9.7E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_05240 ff27966778c359773479b99db225045b 493 Gene3D G3DSA:3.40.190.10 132 236 8.0E-51 T 12-10-2018 K04M3_05240 ff27966778c359773479b99db225045b 493 Gene3D G3DSA:3.40.190.10 38 268 8.0E-51 T 12-10-2018 K04M3_05240 ff27966778c359773479b99db225045b 493 SUPERFAMILY SSF53955 297 456 1.66E-37 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_05240 ff27966778c359773479b99db225045b 493 Gene3D G3DSA:1.10.530.10 296 464 6.1E-40 T 12-10-2018 K04M3_05240 ff27966778c359773479b99db225045b 493 SMART SM00062 43 280 5.3E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 1.9E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 SUPERFAMILY SSF53850 26 332 3.22E-84 T 12-10-2018 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 Gene3D G3DSA:3.40.190.10 32 306 4.6E-106 T 12-10-2018 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 Gene3D G3DSA:3.40.190.10 132 335 4.6E-106 T 12-10-2018 K04M3_16000 4e10f6178df66e4af2a84881cceefe1c 343 PIRSF PIRSF019574 1 343 4.6E-109 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 K04M3_30920 783348e27e28a84bd2a32bcd6c2057c8 264 SUPERFAMILY SSF53335 13 246 6.56E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_30920 783348e27e28a84bd2a32bcd6c2057c8 264 Pfam PF04072 Leucine carboxyl methyltransferase 64 204 7.3E-8 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 K04M3_30920 783348e27e28a84bd2a32bcd6c2057c8 264 PIRSF PIRSF028177 1 264 8.0E-72 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 K04M3_30920 783348e27e28a84bd2a32bcd6c2057c8 264 Gene3D G3DSA:3.40.50.150 2 245 1.7E-20 T 12-10-2018 K04M3_04160 8f766a2c91c31806a89785ab17de395b 67 SUPERFAMILY SSF53098 5 64 2.12E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_04160 8f766a2c91c31806a89785ab17de395b 67 Pfam PF13683 Integrase core domain 1 60 1.2E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_33420 18e0ec2b26d98694239929e2aca67ca3 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 285 2.4E-78 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 K04M3_33420 18e0ec2b26d98694239929e2aca67ca3 331 Gene3D G3DSA:3.40.190.170 22 331 6.0E-102 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily K04M3_33420 18e0ec2b26d98694239929e2aca67ca3 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 308 3.0E-87 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 K04M3_33420 18e0ec2b26d98694239929e2aca67ca3 331 PIRSF PIRSF006470 1 330 6.9E-97 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 K04M3_34700 52810c66efca7ccba0665bfa3b5a36d4 129 Gene3D G3DSA:1.20.120.10 18 126 9.5E-15 T 12-10-2018 K04M3_34700 52810c66efca7ccba0665bfa3b5a36d4 129 SUPERFAMILY SSF47175 24 119 1.41E-30 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 K04M3_34700 52810c66efca7ccba0665bfa3b5a36d4 129 Pfam PF07361 Cytochrome b562 24 119 3.4E-30 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 K04M3_18160 e4f31a5240918b772a1a15b1608f0a99 100 Gene3D G3DSA:3.30.2310.20 1 96 7.6E-20 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily K04M3_18160 e4f31a5240918b772a1a15b1608f0a99 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 2.6E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family K04M3_18160 e4f31a5240918b772a1a15b1608f0a99 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 87 1.9E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SMART SM00322 553 618 1.1E-10 T 12-10-2018 IPR004087 K Homology domain GO:0003676 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Pfam PF00013 KH domain 557 615 3.9E-8 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Gene3D G3DSA:2.40.50.140 623 694 2.1E-29 T 12-10-2018 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Gene3D G3DSA:3.30.1370.10 551 622 2.0E-18 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Pfam PF00575 S1 RNA binding domain 620 691 3.9E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SMART SM00316 621 691 4.5E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Gene3D G3DSA:3.30.230.70 2 229 9.3E-77 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SUPERFAMILY SSF55666 451 550 1.05E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SUPERFAMILY SSF54211 293 489 1.77E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SUPERFAMILY SSF50249 621 704 2.68E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 PIRSF PIRSF005499 2 711 4.0E-297 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SUPERFAMILY SSF55666 146 236 1.82E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SUPERFAMILY SSF54211 5 145 1.47E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 3.6E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 5.3E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 4.4E-25 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.6E-12 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 SUPERFAMILY SSF54791 555 640 5.48E-22 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Gene3D G3DSA:3.30.230.70 234 550 4.3E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 K04M3_25590 ac4421bfda3cac4bc9b75b13f4e8faff 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.138 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 156 234 2.7E-19 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Gene3D G3DSA:3.20.20.80 262 640 4.8E-162 T 12-10-2018 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 SMART SM00642 278 623 2.5E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Pfam PF00128 Alpha amylase, catalytic domain 303 377 1.9E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 PIRSF PIRSF000463 37 755 5.8E-286 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 143 751 4.2E-247 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 SUPERFAMILY SSF51445 273 648 4.65E-108 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 SUPERFAMILY SSF51011 651 753 3.29E-28 T 12-10-2018 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Gene3D G3DSA:2.60.40.10 33 248 8.3E-52 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 SUPERFAMILY SSF81296 144 254 1.33E-26 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Gene3D G3DSA:2.60.40.1180 651 754 4.8E-30 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 656 753 3.8E-16 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 119 754 41.441 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 K04M3_33760 c25cb969dc72498c7ec983dc4b59ccbe 755 SUPERFAMILY SSF81296 49 132 3.27E-12 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 Gene3D G3DSA:1.10.10.10 1 52 6.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 SMART SM00344 1 110 9.1E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 Gene3D G3DSA:3.30.70.920 53 146 7.7E-24 T 12-10-2018 K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 SUPERFAMILY SSF54909 63 149 1.47E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 SUPERFAMILY SSF46785 1 60 4.45E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.4E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.4E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.4E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 2.4E-18 T 12-10-2018 K04M3_45240 9151740144102a731cbb45bcc1cc779f 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 6.0E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_39060 29083384154728df95ea95be8ea5a85f 176 PIRSF PIRSF028301 1 174 1.5E-66 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 K04M3_39060 29083384154728df95ea95be8ea5a85f 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 9.8E-62 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 K04M3_39060 29083384154728df95ea95be8ea5a85f 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 3.6E-60 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 K04M3_05530 634c5138db93664daf3671ebaa617c41 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 2.8E-117 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 K04M3_05530 634c5138db93664daf3671ebaa617c41 258 Gene3D G3DSA:3.40.50.300 1 240 9.0E-101 T 12-10-2018 K04M3_05530 634c5138db93664daf3671ebaa617c41 258 SUPERFAMILY SSF52540 35 223 8.56E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05530 634c5138db93664daf3671ebaa617c41 258 PIRSF PIRSF028756 1 258 1.4E-132 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 K04M3_05530 634c5138db93664daf3671ebaa617c41 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 3.3E-113 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 Gene3D G3DSA:3.40.30.10 8 92 4.4E-23 T 12-10-2018 K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 2.4E-34 T 12-10-2018 IPR007494 Glutaredoxin 2, C-terminal K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 1.1E-72 T 12-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 SUPERFAMILY SSF52833 1 86 4.26E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 3.6E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 Gene3D G3DSA:1.20.1050.10 93 209 5.3E-21 T 12-10-2018 K04M3_46120 0a2cf8adbdee2466e4d0afec7c6e11a7 209 SUPERFAMILY SSF47616 77 208 5.51E-41 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_22690 ed7f0576898261af5bc9c4ec32d232ec 126 Pfam PF00072 Response regulator receiver domain 7 119 2.2E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_22690 ed7f0576898261af5bc9c4ec32d232ec 126 SMART SM00448 5 119 1.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_22690 ed7f0576898261af5bc9c4ec32d232ec 126 SUPERFAMILY SSF52172 3 124 2.7E-38 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_22690 ed7f0576898261af5bc9c4ec32d232ec 126 Gene3D G3DSA:3.40.50.2300 1 126 8.7E-41 T 12-10-2018 K04M3_21930 4d6529ab25237824dfd748295af53898 182 PIRSF PIRSF000232 1 182 9.0E-63 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like K04M3_21930 4d6529ab25237824dfd748295af53898 182 SUPERFAMILY SSF55469 1 181 1.06E-41 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_21930 4d6529ab25237824dfd748295af53898 182 Gene3D G3DSA:3.40.109.10 1 182 1.6E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_21930 4d6529ab25237824dfd748295af53898 182 Pfam PF00881 Nitroreductase family 8 161 3.3E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 Gene3D G3DSA:3.40.5.10 1 50 9.8E-23 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.5E-25 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.815 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.5E-54 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 SUPERFAMILY SSF55653 60 148 7.06E-26 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 Gene3D G3DSA:3.10.430.100 61 149 5.4E-31 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 SUPERFAMILY SSF55658 1 57 1.59E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_28760 8cc9d16506d7f43cec1bb300183e7737 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.6E-20 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 Pfam PF14559 Tetratricopeptide repeat 194 248 5.6E-6 T 12-10-2018 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 Gene3D G3DSA:1.25.40.10 24 176 6.7E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.747 T 12-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 SUPERFAMILY SSF81901 39 274 1.86E-20 T 12-10-2018 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 182 215 0.088 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 216 249 21.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 69 102 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 SMART SM00028 35 68 430.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_20820 c18688a19f43e1b6f96b239c4069a71d 391 Gene3D G3DSA:1.25.40.10 177 350 9.6E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_11430 a1386d93bd394b337e4ec95b7e997848 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 455 1.5E-83 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_11430 a1386d93bd394b337e4ec95b7e997848 539 Gene3D G3DSA:3.40.190.10 217 526 2.9E-142 T 12-10-2018 K04M3_11430 a1386d93bd394b337e4ec95b7e997848 539 Gene3D G3DSA:3.10.105.10 296 514 2.9E-142 T 12-10-2018 K04M3_11430 a1386d93bd394b337e4ec95b7e997848 539 Gene3D G3DSA:3.90.76.10 44 216 2.9E-142 T 12-10-2018 K04M3_11430 a1386d93bd394b337e4ec95b7e997848 539 SUPERFAMILY SSF53850 35 535 2.53E-130 T 12-10-2018 K04M3_11430 a1386d93bd394b337e4ec95b7e997848 539 PIRSF PIRSF002741 4 538 2.1E-91 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 SUPERFAMILY SSF55811 1 127 3.25E-35 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 6.7E-43 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 Gene3D G3DSA:3.90.79.10 1 132 8.5E-42 T 12-10-2018 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 Pfam PF00293 NUDIX domain 7 124 1.7E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.2E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 K04M3_04380 0e8ca0a950988c4969c1a83b2ec73c26 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.2E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 K04M3_03450 8deda773edd368cc29553455d1520384 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 1.8E-22 T 12-10-2018 IPR006869 Domain of unknown function DUF547 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 Pfam PF13533 Biotin-lipoyl like 44 88 8.6E-17 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 Gene3D G3DSA:2.40.50.100 43 234 2.4E-39 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 Gene3D G3DSA:1.10.287.470 77 199 2.4E-39 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 SUPERFAMILY SSF111369 109 166 5.1E-6 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 Gene3D G3DSA:2.40.420.20 313 324 2.4E-39 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 SUPERFAMILY SSF111369 38 96 7.72E-10 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 SUPERFAMILY SSF111369 178 253 2.35E-6 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 Pfam PF13437 HlyD family secretion protein 200 268 3.5E-6 T 12-10-2018 K04M3_20500 1a63c15831288f06bf06c6f8903cc503 354 Gene3D G3DSA:2.40.30.170 38 311 2.4E-39 T 12-10-2018 K04M3_23540 317e5264ca4f64462dd972b9ca47e3d0 357 Pfam PF01594 AI-2E family transporter 20 344 6.8E-75 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like K04M3_15410 dbafed6cf836203cb249dd47a710fc58 372 SUPERFAMILY SSF53756 15 367 2.94E-73 T 12-10-2018 K04M3_15410 dbafed6cf836203cb249dd47a710fc58 372 Pfam PF00534 Glycosyl transferases group 1 199 341 8.4E-36 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_15410 dbafed6cf836203cb249dd47a710fc58 372 Gene3D G3DSA:3.40.50.2000 40 364 1.3E-65 T 12-10-2018 K04M3_15410 dbafed6cf836203cb249dd47a710fc58 372 Gene3D G3DSA:3.40.50.2000 181 353 1.3E-65 T 12-10-2018 K04M3_15410 dbafed6cf836203cb249dd47a710fc58 372 Pfam PF13439 Glycosyltransferase Family 4 26 184 1.6E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 5.4E-36 T 12-10-2018 IPR033248 Transketolase, C-terminal domain K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 SUPERFAMILY SSF52518 4 191 1.55E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 SUPERFAMILY SSF52922 190 323 1.7E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 Gene3D G3DSA:3.40.50.920 198 324 1.2E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 Gene3D G3DSA:3.40.50.970 1 192 1.1E-74 T 12-10-2018 K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 1.9E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_38580 b4afcf6c20a84a2de3896f65675cccab 327 SMART SM00861 4 179 8.0E-62 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Gene3D G3DSA:1.10.225.40 358 445 2.0E-37 T 12-10-2018 IPR038198 MukF, C-terminal domain superfamily K04M3_10240 2741683fa34bd770268144cdf8297b49 445 SUPERFAMILY SSF46785 13 123 1.5E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Pfam PF17192 MukF middle domain 126 286 1.6E-78 T 12-10-2018 IPR033440 Chromosome partition protein MukF, middle domain K04M3_10240 2741683fa34bd770268144cdf8297b49 445 SUPERFAMILY SSF140570 124 286 3.27E-76 T 12-10-2018 IPR036141 MukF, middle domain superfamily K04M3_10240 2741683fa34bd770268144cdf8297b49 445 PIRSF PIRSF018282 1 445 3.9E-247 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Pfam PF17193 MukF C-terminal domain 288 445 2.1E-77 T 12-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Gene3D G3DSA:1.20.58.590 124 316 1.3E-80 T 12-10-2018 IPR036141 MukF, middle domain superfamily K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.39 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Pfam PF03882 MukF winged-helix domain 10 122 9.9E-53 T 12-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain K04M3_10240 2741683fa34bd770268144cdf8297b49 445 Gene3D G3DSA:1.10.10.10 29 123 1.1E-44 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Gene3D G3DSA:2.20.25.90 6 51 6.3E-9 T 12-10-2018 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Pfam PF00384 Molybdopterin oxidoreductase 55 482 1.3E-81 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 SUPERFAMILY SSF53706 6 566 3.14E-167 T 12-10-2018 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 SUPERFAMILY SSF50692 554 695 5.88E-23 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Gene3D G3DSA:3.40.50.740 70 513 1.0E-156 T 12-10-2018 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 SMART SM00926 3 52 9.8E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Gene3D G3DSA:3.40.228.10 135 338 1.0E-156 T 12-10-2018 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 PIRSF PIRSF036643 2 709 7.0E-127 T 12-10-2018 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Gene3D G3DSA:2.40.40.20 578 703 5.1E-22 T 12-10-2018 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Pfam PF04324 BFD-like [2Fe-2S] binding domain 817 866 7.0E-12 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 4.3E-18 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 51 1.8E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_38790 a26e2ff3502487d3b6a15721b64bc875 887 Gene3D G3DSA:1.10.10.1100 817 872 1.6E-13 T 12-10-2018 K04M3_35000 27208608e894c38f5411ace6c68dc598 542 SUPERFAMILY SSF58104 233 542 9.55E-72 T 12-10-2018 K04M3_35000 27208608e894c38f5411ace6c68dc598 542 Pfam PF00672 HAMP domain 215 260 7.0E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_35000 27208608e894c38f5411ace6c68dc598 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 4.0E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_35000 27208608e894c38f5411ace6c68dc598 542 SMART SM00304 213 265 4.8E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_35000 27208608e894c38f5411ace6c68dc598 542 SMART SM00283 280 541 6.1E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_35000 27208608e894c38f5411ace6c68dc598 542 Gene3D G3DSA:1.10.287.950 213 542 6.9E-73 T 12-10-2018 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 SUPERFAMILY SSF51430 2 255 8.25E-83 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PIRSF PIRSF000097 1 107 4.3E-32 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PIRSF PIRSF000097 100 264 2.3E-35 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.8E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 147 176 2.8E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 112 129 2.8E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 184 208 2.8E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.8E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 Gene3D G3DSA:3.20.20.100 1 266 8.7E-93 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 112 129 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 K04M3_16700 1177ed79026b755de7482dc1530a92b7 266 Pfam PF00248 Aldo/keto reductase family 10 249 4.6E-51 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 SUPERFAMILY SSF55103 271 561 2.62E-105 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 PIRSF PIRSF000101 1 566 1.3E-300 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 55.13 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Pfam PF01565 FAD binding domain 41 160 2.1E-9 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 SUPERFAMILY SSF56176 4 268 9.81E-68 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 2.3E-135 T 12-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Gene3D G3DSA:3.30.1370.20 431 515 1.2E-38 T 12-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Gene3D G3DSA:3.30.43.10 1 96 7.1E-14 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Gene3D G3DSA:3.30.465.10 100 263 1.4E-72 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Gene3D G3DSA:3.30.70.610 368 430 5.3E-17 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 K04M3_39320 038dcd0dff6fb0e1ffeedb340deee433 568 Gene3D G3DSA:3.30.70.610 264 348 1.5E-16 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 SUPERFAMILY SSF54631 275 391 2.16E-9 T 12-10-2018 K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 Gene3D G3DSA:3.40.50.300 33 328 1.2E-78 T 12-10-2018 K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 SUPERFAMILY SSF52540 39 265 5.64E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 SMART SM00382 54 243 1.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 Pfam PF00005 ABC transporter 45 193 1.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 393 1.5E-122 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 K04M3_46720 c9bf0823e40d395834a7b4d2b896a086 409 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43190 537f6c93bca925fce71413ff936b412a 784 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 783 2.1E-299 T 12-10-2018 IPR010706 Fatty acid cis-trans isomerase K04M3_03050 527794789bc4fe334f85e309f0acdae8 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.5E-10 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_03050 527794789bc4fe334f85e309f0acdae8 419 Pfam PF02687 FtsX-like permease family 317 410 3.8E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_00500 6101cc5d476b16ba91ea5e3d7e1df015 134 Gene3D G3DSA:1.10.3730.20 4 109 6.8E-28 T 12-10-2018 K04M3_00500 6101cc5d476b16ba91ea5e3d7e1df015 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 2.9E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 K04M3_00500 6101cc5d476b16ba91ea5e3d7e1df015 134 SUPERFAMILY SSF103481 6 108 3.01E-14 T 12-10-2018 K04M3_50080 9861ec7d3481f1843668faea5fe8287d 276 Gene3D G3DSA:3.40.50.150 83 239 2.4E-7 T 12-10-2018 K04M3_50080 9861ec7d3481f1843668faea5fe8287d 276 SUPERFAMILY SSF53335 63 202 7.27E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 SUPERFAMILY SSF52425 4 194 8.76E-43 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 Gene3D G3DSA:1.25.40.80 165 278 6.0E-15 T 12-10-2018 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 Pfam PF00875 DNA photolyase 6 131 1.1E-21 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 PRINTS PR00147 DNA photolyase signature 336 354 1.2E-5 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 PRINTS PR00147 DNA photolyase signature 316 332 1.2E-5 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 Gene3D G3DSA:1.10.579.10 292 479 5.0E-58 T 12-10-2018 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 SUPERFAMILY SSF48173 191 468 1.44E-77 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 1.3E-54 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 K04M3_33980 6abd46bb47bb9c37f37d4758406c2d3e 493 Gene3D G3DSA:3.40.50.620 1 130 1.8E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 6.8E-126 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.0E-9 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 Gene3D G3DSA:3.40.50.300 2 241 3.2E-72 T 12-10-2018 K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 SUPERFAMILY SSF52540 3 237 2.32E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 SMART SM00382 28 231 9.7E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_28010 dbf69108022181cc556cffadcf9aaed5 241 Pfam PF00005 ABC transporter 20 166 2.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_34050 ca8d9660f5a287d3daa0f2398b2d1a2a 217 Gene3D G3DSA:3.40.109.10 1 217 5.9E-63 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_34050 ca8d9660f5a287d3daa0f2398b2d1a2a 217 Pfam PF00881 Nitroreductase family 8 193 7.6E-27 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 K04M3_34050 ca8d9660f5a287d3daa0f2398b2d1a2a 217 SUPERFAMILY SSF55469 1 216 1.57E-66 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_34240 7a05ea3f47e8e5185bc1302161716f63 152 Pfam PF00583 Acetyltransferase (GNAT) family 33 129 1.1E-13 T 12-10-2018 IPR000182 GNAT domain K04M3_34240 7a05ea3f47e8e5185bc1302161716f63 152 Gene3D G3DSA:3.40.630.30 1 152 2.0E-41 T 12-10-2018 K04M3_34240 7a05ea3f47e8e5185bc1302161716f63 152 SUPERFAMILY SSF55729 1 150 2.92E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 SUPERFAMILY SSF102114 5 310 3.53E-88 T 12-10-2018 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.0E-20 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.539 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 SMART SM00876 220 312 4.8E-46 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 SMART SM00729 43 255 1.1E-40 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 3.1E-124 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 Gene3D G3DSA:3.20.20.70 4 315 5.6E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 PIRSF PIRSF001619 1 319 8.2E-138 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_10890 dddb64fe92d705fcca50c787844b6074 350 Pfam PF04055 Radical SAM superfamily 50 199 3.5E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_34460 90a1fb32acff77b3af14170e1204b032 448 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 8.1E-14 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 K04M3_34460 90a1fb32acff77b3af14170e1204b032 448 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 7.1E-49 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 K04M3_34460 90a1fb32acff77b3af14170e1204b032 448 Pfam PF07196 Flagellin hook IN motif 124 181 1.3E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 K04M3_27720 ff3243b5ab4055377cde6a7a4e4ff4aa 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 1.0E-98 T 12-10-2018 IPR018723 Protein of unknown function DUF2254, membrane K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.4E-68 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-34 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-34 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-34 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-34 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.6E-58 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.6E-58 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.6E-58 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.6E-58 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.6E-58 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.6E-58 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 SUPERFAMILY SSF56655 1 259 3.4E-81 T 12-10-2018 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 Gene3D G3DSA:3.40.190.80 142 266 4.2E-37 T 12-10-2018 K04M3_05680 c6642a602e0526cf49db199e32c1fc9d 267 Gene3D G3DSA:3.30.540.10 1 140 2.6E-49 T 12-10-2018 K04M3_19640 e88af0cf42c721b8a8c4eaad52cc70d1 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site K04M3_19640 e88af0cf42c721b8a8c4eaad52cc70d1 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 7.3E-135 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_19640 e88af0cf42c721b8a8c4eaad52cc70d1 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.1E-172 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Gene3D G3DSA:3.40.50.2300 3 132 1.2E-27 T 12-10-2018 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Pfam PF00072 Response regulator receiver domain 7 120 1.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Gene3D G3DSA:1.10.10.10 148 209 1.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 SMART SM00421 147 204 5.0E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 SUPERFAMILY SSF52172 4 173 1.43E-27 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_30080 1fad26fc770e1dfa8fbc74af4d7e6f0a 209 SMART SM00448 5 119 1.6E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_16840 213acf7303841531ee94a21f0f808068 315 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 112 206 9.7E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_16840 213acf7303841531ee94a21f0f808068 315 Gene3D G3DSA:1.10.3720.10 109 314 3.3E-55 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16840 213acf7303841531ee94a21f0f808068 315 SUPERFAMILY SSF161098 111 300 3.53E-47 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16840 213acf7303841531ee94a21f0f808068 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 311 4.9E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 12-10-2018 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03330 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 12-10-2018 K04M3_48730 f1ecbd48a35a9035d11d0f3c61d279cf 380 SUPERFAMILY SSF46689 323 352 4.44E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_48730 f1ecbd48a35a9035d11d0f3c61d279cf 380 Pfam PF05651 Putative sugar diacid recognition 4 137 3.0E-51 T 12-10-2018 IPR008599 Putative sugar diacid recognition K04M3_48730 f1ecbd48a35a9035d11d0f3c61d279cf 380 Gene3D G3DSA:1.10.10.2840 252 380 6.7E-22 T 12-10-2018 K04M3_48730 f1ecbd48a35a9035d11d0f3c61d279cf 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 375 6.4E-21 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 SUPERFAMILY SSF82051 2 157 4.05E-55 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 Gene3D G3DSA:2.70.210.12 1 158 4.4E-58 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.8E-143 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.1E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 SUPERFAMILY SSF52540 151 340 1.07E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.99 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 PIRSF PIRSF002401 1 375 5.9E-137 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 Pfam PF01018 GTP1/OBG 4 156 1.1E-55 T 12-10-2018 IPR006169 GTP1/OBG domain K04M3_03340 4f99f951ea71b7d26f834aa8d5b0005f 391 Gene3D G3DSA:3.40.50.300 159 335 1.3E-51 T 12-10-2018 K04M3_37260 29c82e312d13bca9e70b22d08150a982 179 Gene3D G3DSA:2.60.370.10 54 177 1.6E-43 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37260 29c82e312d13bca9e70b22d08150a982 179 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 9.5E-50 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37260 29c82e312d13bca9e70b22d08150a982 179 SUPERFAMILY SSF110111 55 174 4.05E-47 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_37260 29c82e312d13bca9e70b22d08150a982 179 PIRSF PIRSF005413 1 178 9.0E-67 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 258 6.6E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 Gene3D G3DSA:2.40.30.170 41 267 5.8E-72 T 12-10-2018 K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 Gene3D G3DSA:2.40.420.20 35 334 5.8E-72 T 12-10-2018 K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 Gene3D G3DSA:2.40.50.100 56 188 5.8E-72 T 12-10-2018 K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 4.3E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 Gene3D G3DSA:1.10.287.470 90 149 5.8E-72 T 12-10-2018 K04M3_11480 8132266311dbcfa7074a745c77d98e02 343 SUPERFAMILY SSF111369 47 264 6.54E-32 T 12-10-2018 K04M3_20120 6c3ad074f17f66e20387a96a544659b0 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.434 T 12-10-2018 IPR007376 dsDNA mimic, putative K04M3_20120 6c3ad074f17f66e20387a96a544659b0 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 4.0E-50 T 12-10-2018 IPR007376 dsDNA mimic, putative K04M3_20120 6c3ad074f17f66e20387a96a544659b0 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.8E-45 T 12-10-2018 IPR007376 dsDNA mimic, putative K04M3_20120 6c3ad074f17f66e20387a96a544659b0 106 PIRSF PIRSF004916 1 105 1.4E-52 T 12-10-2018 IPR007376 dsDNA mimic, putative K04M3_20120 6c3ad074f17f66e20387a96a544659b0 106 SUPERFAMILY SSF102816 3 105 8.37E-50 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily K04M3_20120 6c3ad074f17f66e20387a96a544659b0 106 Gene3D G3DSA:3.10.450.140 5 105 9.8E-43 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily K04M3_36140 b28357d906e1c658bf8536e54919b179 289 Gene3D G3DSA:3.40.50.1980 150 289 6.9E-45 T 12-10-2018 K04M3_36140 b28357d906e1c658bf8536e54919b179 289 SUPERFAMILY SSF53807 33 289 2.59E-50 T 12-10-2018 K04M3_36140 b28357d906e1c658bf8536e54919b179 289 Gene3D G3DSA:3.40.50.1980 29 149 6.2E-35 T 12-10-2018 K04M3_36140 b28357d906e1c658bf8536e54919b179 289 Pfam PF01497 Periplasmic binding protein 35 264 3.3E-39 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain K04M3_09700 d8d3d7ac5efe245bb10cf65e6bbf95d5 235 SMART SM00382 33 221 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_09700 d8d3d7ac5efe245bb10cf65e6bbf95d5 235 SUPERFAMILY SSF52540 4 225 7.66E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_09700 d8d3d7ac5efe245bb10cf65e6bbf95d5 235 Pfam PF00005 ABC transporter 24 172 1.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_09700 d8d3d7ac5efe245bb10cf65e6bbf95d5 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.1E-110 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 K04M3_09700 d8d3d7ac5efe245bb10cf65e6bbf95d5 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_09700 d8d3d7ac5efe245bb10cf65e6bbf95d5 235 Gene3D G3DSA:3.40.50.300 1 233 2.3E-65 T 12-10-2018 K04M3_17060 05f66be171b378e053c970fa78930682 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 7.2E-161 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.2E-111 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 K04M3_17060 05f66be171b378e053c970fa78930682 380 Gene3D G3DSA:1.10.580.10 36 360 1.1E-116 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 K04M3_17060 05f66be171b378e053c970fa78930682 380 PIRSF PIRSF001369 7 380 1.1E-116 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type K04M3_17060 05f66be171b378e053c970fa78930682 380 SUPERFAMILY SSF48256 14 380 4.97E-124 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 K04M3_17060 05f66be171b378e053c970fa78930682 380 Gene3D G3DSA:1.10.230.10 229 327 1.1E-116 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 Gene3D G3DSA:2.40.170.20 167 652 3.4E-135 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 SUPERFAMILY SSF56935 33 652 9.89E-128 T 12-10-2018 K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 12-10-2018 IPR010916 TonB box, conserved site K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 Pfam PF00593 TonB dependent receptor 193 650 2.5E-60 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 Gene3D G3DSA:2.170.130.10 28 161 9.4E-41 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_27140 d9b2ad2fe231cfcdfcba1fa568d590b4 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_24030 953b27b8cfc5006a9c5bdfb251c207d0 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 6.0E-64 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 K04M3_24030 953b27b8cfc5006a9c5bdfb251c207d0 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.317 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 K04M3_24030 953b27b8cfc5006a9c5bdfb251c207d0 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 1.6E-56 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 K04M3_20900 c571db823c0caa8115fccc656110326b 467 Gene3D G3DSA:1.10.150.20 167 207 5.4E-11 T 12-10-2018 K04M3_20900 c571db823c0caa8115fccc656110326b 467 SUPERFAMILY SSF56672 5 225 1.22E-34 T 12-10-2018 K04M3_20900 c571db823c0caa8115fccc656110326b 467 Gene3D G3DSA:2.30.40.20 27 68 5.4E-11 T 12-10-2018 K04M3_20900 c571db823c0caa8115fccc656110326b 467 Gene3D G3DSA:3.30.70.270 69 166 5.4E-11 T 12-10-2018 K04M3_20900 c571db823c0caa8115fccc656110326b 467 Pfam PF00817 impB/mucB/samB family 23 146 3.8E-8 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 K04M3_22090 287e56a34a485fcc015ba9e04bac2952 131 Gene3D G3DSA:3.10.180.10 1 129 1.6E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_22090 287e56a34a485fcc015ba9e04bac2952 131 SUPERFAMILY SSF54593 2 127 4.43E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_22090 287e56a34a485fcc015ba9e04bac2952 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 3.1E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_35820 793013273db90f8ac159dd3e7a82f508 277 SUPERFAMILY SSF52540 18 245 2.17E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35820 793013273db90f8ac159dd3e7a82f508 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 1.5E-58 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS K04M3_10060 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 K04M3_10060 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_10060 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_10060 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 K04M3_10060 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 K04M3_10060 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 12-10-2018 K04M3_40010 8fb3313a138f90d207e71985f8948f6a 135 Pfam PF14760 Rnk N-terminus 6 43 4.2E-12 T 12-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain K04M3_40010 8fb3313a138f90d207e71985f8948f6a 135 PIRSF PIRSF006092 1 27 11.0 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 K04M3_40010 8fb3313a138f90d207e71985f8948f6a 135 PIRSF PIRSF006092 22 127 1.3E-30 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 K04M3_40010 8fb3313a138f90d207e71985f8948f6a 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 2.1E-17 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 K04M3_40010 8fb3313a138f90d207e71985f8948f6a 135 Gene3D G3DSA:3.10.50.30 45 135 1.7E-26 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 K04M3_40010 8fb3313a138f90d207e71985f8948f6a 135 SUPERFAMILY SSF54534 49 126 3.92E-17 T 12-10-2018 K04M3_08540 3fd71475e1fff19ef8fb168e8fb5a603 142 Pfam PF01230 HIT domain 11 99 3.1E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein K04M3_08540 3fd71475e1fff19ef8fb168e8fb5a603 142 PIRSF PIRSF000714 2 141 6.8E-54 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type K04M3_08540 3fd71475e1fff19ef8fb168e8fb5a603 142 SUPERFAMILY SSF54197 3 133 6.17E-35 T 12-10-2018 IPR036265 HIT-like superfamily K04M3_08540 3fd71475e1fff19ef8fb168e8fb5a603 142 Gene3D G3DSA:3.30.428.10 1 142 5.2E-44 T 12-10-2018 IPR036265 HIT-like superfamily K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 Gene3D G3DSA:2.30.22.10 142 198 5.1E-26 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.843 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 SUPERFAMILY SSF58014 44 142 5.49E-30 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 Pfam PF01025 GrpE 40 198 5.5E-56 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 Gene3D G3DSA:3.90.20.20 35 141 6.8E-33 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 SUPERFAMILY SSF51064 143 198 6.28E-20 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 177 196 4.1E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 67 83 4.1E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 95 110 4.1E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_06300 f4165ee01922a7e61adf7103c522488b 198 PRINTS PR00773 GrpE protein signature 150 165 4.1E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 Gene3D G3DSA:3.40.50.1400 163 301 1.4E-95 T 12-10-2018 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 Gene3D G3DSA:3.40.50.1400 8 320 1.4E-95 T 12-10-2018 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.1E-108 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 Pfam PF00762 Ferrochelatase 6 319 2.2E-112 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.924 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 K04M3_08190 f0e0f2647c610348ac0329885d711123 320 SUPERFAMILY SSF53800 4 319 1.36E-107 T 12-10-2018 K04M3_22630 9b55ea73e4cdb82018a56a00a1f823ee 164 SMART SM00260 16 153 2.5E-50 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_22630 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 12-10-2018 K04M3_22630 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 12-10-2018 K04M3_22630 9b55ea73e4cdb82018a56a00a1f823ee 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_22630 9b55ea73e4cdb82018a56a00a1f823ee 164 SUPERFAMILY SSF50341 15 158 9.42E-42 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_01500 ab069418d330fb7fdf7a9d5526521df0 135 Gene3D G3DSA:3.30.420.270 61 129 7.2E-10 T 12-10-2018 K04M3_01500 ab069418d330fb7fdf7a9d5526521df0 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 4.1E-32 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 K04M3_17820 48b342bd6835792a5ab17939f9a6c56c 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.5E-15 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 K04M3_10700 e6878458781c49af36434b09de1d024c 340 Pfam PF00579 tRNA synthetases class I (W and Y) 11 292 1.3E-51 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_10700 e6878458781c49af36434b09de1d024c 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 1.0E-69 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_10700 e6878458781c49af36434b09de1d024c 340 Gene3D G3DSA:1.10.240.10 191 305 1.1E-99 T 12-10-2018 K04M3_10700 e6878458781c49af36434b09de1d024c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_10700 e6878458781c49af36434b09de1d024c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_10700 e6878458781c49af36434b09de1d024c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_10700 e6878458781c49af36434b09de1d024c 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.4E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_10700 e6878458781c49af36434b09de1d024c 340 SUPERFAMILY SSF52374 12 337 4.69E-75 T 12-10-2018 K04M3_10700 e6878458781c49af36434b09de1d024c 340 Gene3D G3DSA:3.40.50.620 13 332 1.1E-99 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_10950 82d883b0054dd7a2cc49ae33c601e8ec 139 Pfam PF12680 SnoaL-like domain 9 108 6.9E-11 T 12-10-2018 IPR037401 SnoaL-like domain K04M3_10950 82d883b0054dd7a2cc49ae33c601e8ec 139 SUPERFAMILY SSF54427 5 130 1.08E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_10950 82d883b0054dd7a2cc49ae33c601e8ec 139 Gene3D G3DSA:3.10.450.50 4 125 4.4E-20 T 12-10-2018 K04M3_47720 94bfcfc7ac282eab96470294a52f899b 132 SUPERFAMILY SSF82784 1 131 2.09E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily K04M3_47720 94bfcfc7ac282eab96470294a52f899b 132 Gene3D G3DSA:3.30.300.20 35 132 9.8E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_47720 94bfcfc7ac282eab96470294a52f899b 132 Pfam PF02566 OsmC-like protein 29 126 2.7E-17 T 12-10-2018 IPR003718 OsmC/Ohr family K04M3_47720 94bfcfc7ac282eab96470294a52f899b 132 Gene3D G3DSA:2.20.25.10 1 34 5.0E-20 T 12-10-2018 K04M3_08250 f105d9896fd7214c8624657c987fb758 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 4.3E-155 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 K04M3_08250 f105d9896fd7214c8624657c987fb758 378 SUPERFAMILY SSF51556 54 347 6.81E-102 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_08250 f105d9896fd7214c8624657c987fb758 378 SUPERFAMILY SSF51338 1 53 6.79E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_08250 f105d9896fd7214c8624657c987fb758 378 Pfam PF01979 Amidohydrolase family 51 374 5.3E-35 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 K04M3_08250 f105d9896fd7214c8624657c987fb758 378 Gene3D G3DSA:3.20.20.140 55 341 7.0E-142 T 12-10-2018 K04M3_08250 f105d9896fd7214c8624657c987fb758 378 Gene3D G3DSA:2.30.40.10 6 373 7.0E-142 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 K04M3_08250 f105d9896fd7214c8624657c987fb758 378 PIRSF PIRSF038994 1 378 2.2E-121 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 3.4E-81 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 SUPERFAMILY SSF48173 191 470 7.85E-106 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 PRINTS PR00147 DNA photolyase signature 384 398 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 PRINTS PR00147 DNA photolyase signature 325 341 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 PRINTS PR00147 DNA photolyase signature 345 363 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-29 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 Gene3D G3DSA:1.25.40.80 133 286 1.7E-75 T 12-10-2018 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 Gene3D G3DSA:3.40.50.620 3 204 1.7E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 SUPERFAMILY SSF52425 1 186 7.85E-51 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 Pfam PF00875 DNA photolyase 3 162 1.6E-45 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 K04M3_35210 c7f2260f68545bcfdbdb9242708df18b 471 Gene3D G3DSA:1.10.579.10 293 471 1.1E-80 T 12-10-2018 K04M3_24190 e13665cc267609cc8b8098f92ecd1b3c 231 Gene3D G3DSA:2.40.30.70 1 139 1.4E-42 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily K04M3_24190 e13665cc267609cc8b8098f92ecd1b3c 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 12-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site K04M3_24190 e13665cc267609cc8b8098f92ecd1b3c 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 1.2E-48 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain K04M3_24190 e13665cc267609cc8b8098f92ecd1b3c 231 SUPERFAMILY SSF118196 1 226 6.8E-79 T 12-10-2018 IPR036413 YaeB-like superfamily K04M3_24190 e13665cc267609cc8b8098f92ecd1b3c 231 Gene3D G3DSA:3.30.2310.10 140 227 1.3E-20 T 12-10-2018 K04M3_24190 e13665cc267609cc8b8098f92ecd1b3c 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 4.5E-39 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain K04M3_24700 93ffd09b817ae6a2acfcd194e9138fa0 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 4.6E-205 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 K04M3_24700 93ffd09b817ae6a2acfcd194e9138fa0 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.497 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 K04M3_24700 93ffd09b817ae6a2acfcd194e9138fa0 414 PIRSF PIRSF016055 1 414 1.6E-199 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 K04M3_24700 93ffd09b817ae6a2acfcd194e9138fa0 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 2.1E-107 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 K04M3_40620 b6e097630b8f630eccef5e157a3b2d6b 129 Gene3D G3DSA:3.40.50.620 3 129 2.0E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_40620 b6e097630b8f630eccef5e157a3b2d6b 129 SUPERFAMILY SSF52402 3 125 2.34E-21 T 12-10-2018 K04M3_40620 b6e097630b8f630eccef5e157a3b2d6b 129 PIRSF PIRSF006276 1 129 4.3E-37 T 12-10-2018 IPR006015 Universal stress protein A K04M3_40620 b6e097630b8f630eccef5e157a3b2d6b 129 Pfam PF00582 Universal stress protein family 2 125 5.6E-14 T 12-10-2018 IPR006016 UspA K04M3_07050 d163d09f61888e91e8d23689173ece0b 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.421 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 K04M3_07050 d163d09f61888e91e8d23689173ece0b 505 Gene3D G3DSA:3.60.110.10 211 477 7.8E-15 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_07050 d163d09f61888e91e8d23689173ece0b 505 SUPERFAMILY SSF56317 213 485 7.06E-40 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_07050 d163d09f61888e91e8d23689173ece0b 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 9.0E-37 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 K04M3_07050 d163d09f61888e91e8d23689173ece0b 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 2.6E-97 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 Pfam PF04408 Helicase associated domain (HA2) 421 485 1.1E-5 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 Gene3D G3DSA:3.40.50.300 43 209 7.5E-42 T 12-10-2018 K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 SMART SM00490 265 361 6.6E-15 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 SMART SM00487 41 220 2.0E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 Gene3D G3DSA:1.20.120.1080 401 501 1.2E-7 T 12-10-2018 K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 SUPERFAMILY SSF52540 66 372 6.67E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 Pfam PF00270 DEAD/DEAH box helicase 66 198 4.8E-9 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 Gene3D G3DSA:3.40.50.300 214 377 1.8E-44 T 12-10-2018 K04M3_12160 f3422d8e601cf50e4064d6bbb5e54852 830 Pfam PF00271 Helicase conserved C-terminal domain 247 360 1.0E-15 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_46790 a080f50ad33da2275da5d85174f3c8d3 259 SUPERFAMILY SSF53335 60 228 1.2E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_46790 a080f50ad33da2275da5d85174f3c8d3 259 Gene3D G3DSA:3.40.50.150 56 257 1.0E-10 T 12-10-2018 K04M3_46790 a080f50ad33da2275da5d85174f3c8d3 259 Pfam PF13489 Methyltransferase domain 65 210 2.8E-7 T 12-10-2018 K04M3_41990 137bff8053c252fb2eb5ecaa8518b692 179 SUPERFAMILY SSF81342 4 175 2.9E-35 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 K04M3_41990 137bff8053c252fb2eb5ecaa8518b692 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 1.9E-31 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 K04M3_41990 137bff8053c252fb2eb5ecaa8518b692 179 Gene3D G3DSA:1.20.950.20 2 80 5.9E-6 T 12-10-2018 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 193 3.9E-70 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 Pfam PF01514 Secretory protein of YscJ/FliF family 8 187 1.6E-23 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 7.9E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 7.9E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 7.9E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 7.9E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 7.9E-29 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 Gene3D G3DSA:3.30.70.1530 19 90 8.8E-25 T 12-10-2018 K04M3_17460 474ae7bb2094a8d1e60f786e882b4ecc 247 Gene3D G3DSA:3.30.300.30 92 200 2.7E-39 T 12-10-2018 K04M3_35850 d0c8d4b00e8d8b9742c0621010ada57d 269 Pfam PF10364 Putative capsular polysaccharide synthesis protein 120 255 3.6E-48 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS K04M3_35850 d0c8d4b00e8d8b9742c0621010ada57d 269 SUPERFAMILY SSF52540 11 229 2.08E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_14260 a76afa30194868c317e1a8e0ee718e70 71 SUPERFAMILY SSF55486 1 71 3.17E-13 T 12-10-2018 K04M3_14260 a76afa30194868c317e1a8e0ee718e70 71 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 1 70 1.4E-7 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14260 a76afa30194868c317e1a8e0ee718e70 71 Gene3D G3DSA:1.10.1370.30 1 71 1.5E-23 T 12-10-2018 K04M3_13290 720b1a2a0ab21c24dcab56feff070192 324 Gene3D G3DSA:3.40.50.720 119 302 4.6E-81 T 12-10-2018 K04M3_13290 720b1a2a0ab21c24dcab56feff070192 324 Gene3D G3DSA:3.30.1780.10 5 315 4.6E-81 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 K04M3_13290 720b1a2a0ab21c24dcab56feff070192 324 SUPERFAMILY SSF51735 1 315 7.68E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_13290 720b1a2a0ab21c24dcab56feff070192 324 PIRSF PIRSF001439 1 319 2.0E-68 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 K04M3_13290 720b1a2a0ab21c24dcab56feff070192 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 4.2E-54 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 K04M3_40400 7b5cc92ebb314c351614afbeccd6e684 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 3.9E-53 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_40400 7b5cc92ebb314c351614afbeccd6e684 461 Pfam PF01554 MatE 22 182 4.8E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_40400 7b5cc92ebb314c351614afbeccd6e684 461 Pfam PF01554 MatE 249 411 1.6E-15 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_40400 7b5cc92ebb314c351614afbeccd6e684 461 PIRSF PIRSF006603 2 461 1.8E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_25930 41ac41403948a4916f8be2f6976f41ef 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.4E-45 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 K04M3_25930 41ac41403948a4916f8be2f6976f41ef 296 SUPERFAMILY SSF53067 114 283 2.22E-43 T 12-10-2018 K04M3_25930 41ac41403948a4916f8be2f6976f41ef 296 Gene3D G3DSA:3.30.420.40 4 114 7.6E-68 T 12-10-2018 K04M3_25930 41ac41403948a4916f8be2f6976f41ef 296 Gene3D G3DSA:3.30.420.40 115 261 7.6E-68 T 12-10-2018 K04M3_25930 41ac41403948a4916f8be2f6976f41ef 296 SUPERFAMILY SSF53067 1 111 5.65E-25 T 12-10-2018 K04M3_39520 5176ab15074c036d9eb4eae112bc882b 627 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 37 625 5.4E-186 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 K04M3_39520 5176ab15074c036d9eb4eae112bc882b 627 SUPERFAMILY SSF51998 46 607 3.97E-186 T 12-10-2018 K04M3_39520 5176ab15074c036d9eb4eae112bc882b 627 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 38 625 6.0E-177 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 K04M3_39520 5176ab15074c036d9eb4eae112bc882b 627 ProSitePatterns PS00850 Glycine radical domain signature. 596 604 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site K04M3_39520 5176ab15074c036d9eb4eae112bc882b 627 Gene3D G3DSA:3.20.70.20 42 607 2.9E-219 T 12-10-2018 K04M3_09210 d82e52c3910faed3fd406e3d627a8b40 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.42 T 12-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 K04M3_09210 d82e52c3910faed3fd406e3d627a8b40 194 SMART SM00471 26 151 3.3E-8 T 12-10-2018 IPR003607 HD/PDEase domain K04M3_09210 d82e52c3910faed3fd406e3d627a8b40 194 Gene3D G3DSA:1.10.3210.10 1 194 4.7E-85 T 12-10-2018 K04M3_09210 d82e52c3910faed3fd406e3d627a8b40 194 SUPERFAMILY SSF109604 4 183 5.42E-45 T 12-10-2018 K04M3_09210 d82e52c3910faed3fd406e3d627a8b40 194 Pfam PF13023 HD domain 11 158 4.0E-17 T 12-10-2018 IPR006674 HD domain K04M3_09210 d82e52c3910faed3fd406e3d627a8b40 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 5.0E-47 T 12-10-2018 K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 SUPERFAMILY SSF55781 64 228 4.9E-25 T 12-10-2018 K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 Gene3D G3DSA:1.10.10.10 3 75 4.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 SMART SM00346 8 97 2.5E-16 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 Pfam PF01614 Bacterial transcriptional regulator 127 226 7.3E-12 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 SUPERFAMILY SSF46785 8 75 5.47E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 Gene3D G3DSA:3.30.450.40 76 231 8.7E-25 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_16680 032e992ebcca2bd54d3413ca62d115fd 232 Pfam PF09339 IclR helix-turn-helix domain 10 59 3.8E-13 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 K04M3_28160 2451864af326c4dd523edde35e154f42 273 Gene3D G3DSA:3.60.110.10 1 268 5.3E-89 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_28160 2451864af326c4dd523edde35e154f42 273 SUPERFAMILY SSF56317 3 263 9.42E-80 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_28160 2451864af326c4dd523edde35e154f42 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 2.2E-54 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 K04M3_28160 2451864af326c4dd523edde35e154f42 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site K04M3_35610 460f644b054e24a8c3488efa7e006095 395 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 390 5.7E-31 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 2.5E-17 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 2.5E-17 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 2.5E-17 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 2.5E-17 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 2.5E-17 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 Gene3D G3DSA:2.102.10.10 47 172 1.4E-65 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 Pfam PF00355 Rieske [2Fe-2S] domain 49 134 5.6E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 SUPERFAMILY SSF55961 169 391 2.35E-46 T 12-10-2018 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 Gene3D G3DSA:3.90.380.10 25 385 1.4E-65 T 12-10-2018 K04M3_35610 460f644b054e24a8c3488efa7e006095 395 SUPERFAMILY SSF50022 15 167 8.64E-42 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 PIRSF PIRSF000456 4 262 1.7E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 7.3E-5 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.4E-7 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 SUPERFAMILY SSF51161 1 262 1.79E-73 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Gene3D G3DSA:2.160.10.10 1 196 8.0E-50 T 12-10-2018 K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.8E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 K04M3_23880 5c364f1a860677f7619c53c97b0d1a53 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.8 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Gene3D G3DSA:3.30.830.10 43 267 2.0E-66 T 12-10-2018 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 SUPERFAMILY SSF63411 274 464 6.9E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 5.2E-31 T 12-10-2018 IPR007863 Peptidase M16, C-terminal K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 1.5E-22 T 12-10-2018 IPR007863 Peptidase M16, C-terminal K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Gene3D G3DSA:3.30.830.10 270 467 1.3E-33 T 12-10-2018 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 SUPERFAMILY SSF63411 515 717 3.03E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 SUPERFAMILY SSF63411 45 254 1.02E-55 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Gene3D G3DSA:3.30.830.10 521 726 8.2E-43 T 12-10-2018 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 SUPERFAMILY SSF63411 736 936 8.33E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Pfam PF00675 Insulinase (Peptidase family M16) 62 150 3.2E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 1.3E-10 T 12-10-2018 IPR011765 Peptidase M16, N-terminal K04M3_26440 56a11026323b7dbb81a76baf9ddc1d35 947 Gene3D G3DSA:3.30.830.10 738 930 3.4E-38 T 12-10-2018 K04M3_08280 a2768401993f35200a13f91dfa263f7e 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_08280 a2768401993f35200a13f91dfa263f7e 149 SUPERFAMILY SSF46785 5 135 7.5E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_08280 a2768401993f35200a13f91dfa263f7e 149 Gene3D G3DSA:3.30.1490.190 85 141 2.3E-23 T 12-10-2018 K04M3_08280 a2768401993f35200a13f91dfa263f7e 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.5E-46 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 K04M3_19940 78bab9e560d2bdf2d8de3ecfd0b79abc 377 Gene3D G3DSA:1.10.620.20 2 341 1.9E-143 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 K04M3_19940 78bab9e560d2bdf2d8de3ecfd0b79abc 377 SUPERFAMILY SSF47240 3 341 6.15E-111 T 12-10-2018 IPR009078 Ferritin-like superfamily K04M3_19940 78bab9e560d2bdf2d8de3ecfd0b79abc 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_19940 78bab9e560d2bdf2d8de3ecfd0b79abc 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.2E-49 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 Gene3D G3DSA:3.40.1360.10 136 261 3.3E-40 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 Gene3D G3DSA:2.20.25.180 56 134 2.1E-15 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 Pfam PF13155 Toprim-like 152 241 2.2E-11 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 Gene3D G3DSA:2.20.25.10 1 55 3.2E-15 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 SMART SM00778 10 49 1.4E-4 T 12-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 SMART SM00493 149 226 2.7E-5 T 12-10-2018 IPR006171 TOPRIM domain K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 Gene3D G3DSA:3.40.50.300 267 535 2.9E-32 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 SUPERFAMILY SSF56731 62 254 2.88E-47 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 SUPERFAMILY SSF57783 11 41 1.42E-8 T 12-10-2018 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 Pfam PF03796 DnaB-like helicase C terminal domain 282 459 5.7E-8 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 K04M3_39410 2a9676bd7c7637254806443f486ac7ca 552 SUPERFAMILY SSF52540 276 499 5.63E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03110 15f54e23c334aef05b4a66d166f8cafb 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.123 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_03110 15f54e23c334aef05b4a66d166f8cafb 212 SUPERFAMILY SSF55068 3 207 1.31E-79 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_03110 15f54e23c334aef05b4a66d166f8cafb 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 9.8E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_03110 15f54e23c334aef05b4a66d166f8cafb 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 2.4E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_03110 15f54e23c334aef05b4a66d166f8cafb 212 Gene3D G3DSA:3.30.1060.10 3 212 2.9E-92 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 K04M3_16760 0879163cb68216e1653b95e63129c214 349 SUPERFAMILY SSF51735 152 313 1.03E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_16760 0879163cb68216e1653b95e63129c214 349 Pfam PF00107 Zinc-binding dehydrogenase 190 310 1.1E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_16760 0879163cb68216e1653b95e63129c214 349 Gene3D G3DSA:3.90.180.10 15 345 6.3E-103 T 12-10-2018 K04M3_16760 0879163cb68216e1653b95e63129c214 349 Gene3D G3DSA:3.40.50.720 166 319 6.3E-103 T 12-10-2018 K04M3_16760 0879163cb68216e1653b95e63129c214 349 SUPERFAMILY SSF50129 4 186 5.66E-32 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_16760 0879163cb68216e1653b95e63129c214 349 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 179 200 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 K04M3_16760 0879163cb68216e1653b95e63129c214 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 147 2.5E-10 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_16760 0879163cb68216e1653b95e63129c214 349 SMART SM00829 17 346 5.6E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 SUPERFAMILY SSF52540 4 286 1.18E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 Gene3D G3DSA:3.40.50.300 1 289 6.2E-111 T 12-10-2018 K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 5.2E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 5.2E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 5.2E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 5.2E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 K04M3_29300 39cf65ae3fb084e8017ad2ab4c87fd94 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 5.4E-70 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 K04M3_06170 ff0f50b732f01102eb62b5f30c0abb12 511 Gene3D G3DSA:3.60.110.10 222 508 5.3E-61 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_06170 ff0f50b732f01102eb62b5f30c0abb12 511 Gene3D G3DSA:3.40.630.30 4 221 1.2E-48 T 12-10-2018 K04M3_06170 ff0f50b732f01102eb62b5f30c0abb12 511 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 3.9E-7 T 12-10-2018 IPR000182 GNAT domain K04M3_06170 ff0f50b732f01102eb62b5f30c0abb12 511 SUPERFAMILY SSF56317 222 491 4.45E-60 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily K04M3_06170 ff0f50b732f01102eb62b5f30c0abb12 511 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 1.6E-34 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 K04M3_06170 ff0f50b732f01102eb62b5f30c0abb12 511 SUPERFAMILY SSF55729 5 140 6.69E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_28890 91840c21902db99b547227eefa66e78c 338 Gene3D G3DSA:3.30.420.40 182 292 1.2E-45 T 12-10-2018 K04M3_28890 91840c21902db99b547227eefa66e78c 338 Gene3D G3DSA:3.30.420.40 8 325 1.2E-45 T 12-10-2018 K04M3_28890 91840c21902db99b547227eefa66e78c 338 Gene3D G3DSA:3.30.1490.300 82 141 1.2E-45 T 12-10-2018 K04M3_28890 91840c21902db99b547227eefa66e78c 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 5.4E-53 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM K04M3_28890 91840c21902db99b547227eefa66e78c 338 SUPERFAMILY SSF53067 6 165 3.42E-7 T 12-10-2018 K04M3_28890 91840c21902db99b547227eefa66e78c 338 SMART SM00842 6 169 0.0087 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 K04M3_28890 91840c21902db99b547227eefa66e78c 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 3.9E-73 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM K04M3_28890 91840c21902db99b547227eefa66e78c 338 PIRSF PIRSF019169 1 328 2.0E-91 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 PIRSF PIRSF004654 1 296 1.1E-91 T 12-10-2018 IPR023605 Lipoprotein NlpI K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 Gene3D G3DSA:1.25.40.10 26 296 2.0E-80 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 SMART SM00028 66 99 0.45 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 SMART SM00028 134 167 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 SMART SM00028 238 271 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 SMART SM00028 100 133 0.0087 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_25580 5b30f717c6253faa2c3c6ebced3a26bf 306 SUPERFAMILY SSF48452 34 286 1.76E-68 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Gene3D G3DSA:1.10.10.60 458 513 2.9E-25 T 12-10-2018 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Gene3D G3DSA:1.10.8.60 377 451 3.5E-16 T 12-10-2018 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 SMART SM00382 225 368 5.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Pfam PF00989 PAS fold 83 130 5.3E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 SUPERFAMILY SSF55785 81 171 1.1E-9 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 12-10-2018 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Pfam PF00158 Sigma-54 interaction domain 206 370 6.6E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 SMART SM00091 80 146 3.9E-6 T 12-10-2018 IPR000014 PAS domain K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 SUPERFAMILY SSF52540 205 445 6.83E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Gene3D G3DSA:3.30.70.260 1 80 1.3E-25 T 12-10-2018 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Gene3D G3DSA:3.40.50.300 198 375 1.3E-56 T 12-10-2018 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 SUPERFAMILY SSF46689 461 512 9.56E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_19380 5eb78fe0136d444fc2627da15d649544 514 Gene3D G3DSA:3.30.450.20 82 189 1.7E-19 T 12-10-2018 K04M3_07970 50dfb7363db9bb67360ba644891e5ca9 527 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 479 1.7E-97 T 12-10-2018 IPR017745 BcsE, GIL domain GO:0035438 K04M3_07970 50dfb7363db9bb67360ba644891e5ca9 527 Pfam PF10995 GGDEF I-site like or GIL domain 166 478 1.9E-100 T 12-10-2018 IPR017745 BcsE, GIL domain GO:0035438 K04M3_22820 bae4071e747ec58a8546973ca95c292d 617 Pfam PF02120 Flagellar hook-length control protein FliK 488 571 1.5E-25 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal K04M3_22820 bae4071e747ec58a8546973ca95c292d 617 Gene3D G3DSA:3.30.750.140 467 582 1.5E-31 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily K04M3_47280 b73955098ed3825e32307c83c53e08c9 456 Gene3D G3DSA:3.30.1330.90 10 157 2.0E-50 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 K04M3_47280 b73955098ed3825e32307c83c53e08c9 456 SUPERFAMILY SSF143548 16 155 2.62E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 K04M3_47280 b73955098ed3825e32307c83c53e08c9 456 Pfam PF03313 Serine dehydratase alpha chain 190 447 1.5E-94 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit K04M3_47280 b73955098ed3825e32307c83c53e08c9 456 Pfam PF03315 Serine dehydratase beta chain 3 153 8.1E-53 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 K04M3_47280 b73955098ed3825e32307c83c53e08c9 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 3.9E-199 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 K04M3_03270 3e623cde531668bfaa235d091f9a7057 322 Pfam PF16868 NMT1-like family 30 319 1.8E-96 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family K04M3_03270 3e623cde531668bfaa235d091f9a7057 322 SUPERFAMILY SSF53850 25 321 6.69E-89 T 12-10-2018 K04M3_03270 3e623cde531668bfaa235d091f9a7057 322 Gene3D G3DSA:3.40.190.10 30 319 2.4E-111 T 12-10-2018 K04M3_03270 3e623cde531668bfaa235d091f9a7057 322 Gene3D G3DSA:3.40.190.10 117 255 2.4E-111 T 12-10-2018 K04M3_03270 3e623cde531668bfaa235d091f9a7057 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 3.1E-114 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family K04M3_20060 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 PIRSF PIRSF000847 1 184 3.6E-46 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 K04M3_20060 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 K04M3_20060 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 Gene3D G3DSA:1.20.120.1760 2 180 1.8E-17 T 12-10-2018 K04M3_20060 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 K04M3_20060 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 4.3E-55 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 K04M3_04940 553c0baa7257b1ab40a4823ef9481b05 380 Pfam PF08014 Domain of unknown function (DUF1704) 42 378 1.4E-113 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 K04M3_04940 553c0baa7257b1ab40a4823ef9481b05 380 SMART SM01154 41 380 1.1E-155 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 K04M3_04940 553c0baa7257b1ab40a4823ef9481b05 380 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 16 373 2.8E-131 T 12-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 SUPERFAMILY SSF48452 442 805 1.28E-156 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:3.40.50.300 12 165 5.9E-7 T 12-10-2018 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.784 T 12-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 SMART SM00421 836 893 5.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 SUPERFAMILY SSF52540 14 230 3.43E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_33730 2529c1e08ecc00f8491abeb7428a4eaf 902 Gene3D G3DSA:1.25.40.10 443 811 2.8E-83 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.30.1950.10 45 101 6.5E-16 T 12-10-2018 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF10531 SLBB domain 590 633 2.0E-11 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF10531 SLBB domain 212 253 1.6E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF10531 SLBB domain 105 149 1.9E-4 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF10531 SLBB domain 495 538 8.9E-5 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF10531 SLBB domain 396 447 6.8E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF10531 SLBB domain 299 352 3.2E-12 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 91 6.5E-11 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.10.560.10 578 671 5.7E-19 T 12-10-2018 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.10.560.10 289 378 5.2E-16 T 12-10-2018 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.10.560.10 388 473 1.2E-13 T 12-10-2018 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.10.560.10 482 577 1.1E-16 T 12-10-2018 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.10.560.10 200 288 2.0E-17 T 12-10-2018 K04M3_15520 422ee6174b1d4ff9a77fc6436609c07c 700 Gene3D G3DSA:3.10.560.10 102 182 6.5E-16 T 12-10-2018 K04M3_24810 2843013c925d8c1da39b505e39aff9af 281 SUPERFAMILY SSF111364 30 281 8.37E-85 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 K04M3_24810 2843013c925d8c1da39b505e39aff9af 281 Gene3D G3DSA:2.40.230.20 23 281 3.9E-76 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 K04M3_24810 2843013c925d8c1da39b505e39aff9af 281 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 281 7.4E-100 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 K04M3_45250 3b7677074e1f4eff92b7f1ec90df50cb 308 SUPERFAMILY SSF103481 39 139 2.22E-10 T 12-10-2018 K04M3_45250 3b7677074e1f4eff92b7f1ec90df50cb 308 Pfam PF00892 EamA-like transporter family 3 136 3.7E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_45250 3b7677074e1f4eff92b7f1ec90df50cb 308 Pfam PF00892 EamA-like transporter family 151 289 1.4E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_45250 3b7677074e1f4eff92b7f1ec90df50cb 308 SUPERFAMILY SSF103481 204 289 7.85E-9 T 12-10-2018 K04M3_25400 69dd3d5a269b3755eee41824e9e32ff4 239 SUPERFAMILY SSF53167 3 234 7.59E-93 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 K04M3_25400 69dd3d5a269b3755eee41824e9e32ff4 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.732 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 K04M3_25400 69dd3d5a269b3755eee41824e9e32ff4 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_25400 69dd3d5a269b3755eee41824e9e32ff4 239 Gene3D G3DSA:3.40.50.1580 1 238 5.4E-76 T 12-10-2018 K04M3_25400 69dd3d5a269b3755eee41824e9e32ff4 239 Pfam PF01048 Phosphorylase superfamily 15 217 6.1E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 K04M3_25400 69dd3d5a269b3755eee41824e9e32ff4 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.5E-119 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 K04M3_26250 37aa2d9c098262a42a76a451fc0d1bda 183 SUPERFAMILY SSF55846 4 181 4.06E-63 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_26250 37aa2d9c098262a42a76a451fc0d1bda 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 1.5E-26 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_26250 37aa2d9c098262a42a76a451fc0d1bda 183 SMART SM00644 18 169 1.5E-52 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_26250 37aa2d9c098262a42a76a451fc0d1bda 183 Gene3D G3DSA:3.40.80.10 4 183 5.4E-53 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 K04M3_28290 3d4249a9a5d51c67ec652ac86d0091da 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.3E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28290 3d4249a9a5d51c67ec652ac86d0091da 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28290 3d4249a9a5d51c67ec652ac86d0091da 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28290 3d4249a9a5d51c67ec652ac86d0091da 167 SUPERFAMILY SSF54523 7 133 8.63E-13 T 12-10-2018 K04M3_28290 3d4249a9a5d51c67ec652ac86d0091da 167 Gene3D G3DSA:3.30.700.10 7 167 2.2E-12 T 12-10-2018 K04M3_41170 045e78e03a06938cf41e236e1adaa3ea 122 Pfam PF12472 Phage related protein 63 119 4.0E-20 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 K04M3_41170 045e78e03a06938cf41e236e1adaa3ea 122 SUPERFAMILY SSF47413 20 63 5.9E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_41170 045e78e03a06938cf41e236e1adaa3ea 122 Gene3D G3DSA:1.10.260.40 3 77 4.5E-5 T 12-10-2018 K04M3_41560 045e78e03a06938cf41e236e1adaa3ea 122 Pfam PF12472 Phage related protein 63 119 4.0E-20 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 K04M3_41560 045e78e03a06938cf41e236e1adaa3ea 122 SUPERFAMILY SSF47413 20 63 5.9E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_41560 045e78e03a06938cf41e236e1adaa3ea 122 Gene3D G3DSA:1.10.260.40 3 77 4.5E-5 T 12-10-2018 K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 SUPERFAMILY SSF53686 1 424 1.15E-131 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 Pfam PF14821 Threonine synthase N terminus 8 78 1.7E-8 T 12-10-2018 IPR029144 Threonine synthase, N-terminal K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 366 4.7E-23 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 Gene3D G3DSA:3.40.50.1100 101 399 1.4E-137 T 12-10-2018 K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 390 6.4E-113 T 12-10-2018 IPR004450 Threonine synthase-like K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 Gene3D G3DSA:3.90.1380.10 1 79 1.2E-31 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 K04M3_04650 b47226e9d2600894d046add4b9a0412e 426 Gene3D G3DSA:3.40.50.1100 83 392 1.4E-137 T 12-10-2018 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-35 T 12-10-2018 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 12-10-2018 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 12-10-2018 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 12-10-2018 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 SUPERFAMILY SSF52833 3 107 3.72E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_31470 1f1bc86dad0744e1dd83bbdaaa1e579f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.5E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 Gene3D G3DSA:3.40.50.720 1 245 1.1E-74 T 12-10-2018 K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 2.4E-57 T 12-10-2018 K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 SUPERFAMILY SSF51735 2 245 7.04E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.7E-115 T 12-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 K04M3_45150 daad90ca2fc7756f99f86914e0073ed5 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 9.8E-4 T 12-10-2018 K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 3.0E-26 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 SUPERFAMILY SSF54862 40 220 7.33E-65 T 12-10-2018 K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 Gene3D G3DSA:3.30.70.20 32 75 3.4E-6 T 12-10-2018 K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 8.7E-132 T 12-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_19860 f5f08f862ad5861b4c1abb72e3ac1ee1 228 Gene3D G3DSA:3.30.70.20 76 228 9.6E-56 T 12-10-2018 K04M3_05040 1ad948d7456955718ff868cfdfc8013f 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.023 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 K04M3_05040 1ad948d7456955718ff868cfdfc8013f 317 Gene3D G3DSA:3.40.50.11270 12 96 5.0E-108 T 12-10-2018 K04M3_05040 1ad948d7456955718ff868cfdfc8013f 317 Pfam PF02401 LytB protein 3 284 8.9E-92 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 K04M3_05040 1ad948d7456955718ff868cfdfc8013f 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 6.3E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 K04M3_05040 1ad948d7456955718ff868cfdfc8013f 317 Gene3D G3DSA:3.40.1010.20 97 198 5.0E-108 T 12-10-2018 K04M3_05040 1ad948d7456955718ff868cfdfc8013f 317 Gene3D G3DSA:3.40.1010.20 6 283 5.0E-108 T 12-10-2018 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 PIRSF PIRSF000130 1 488 2.5E-201 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 SUPERFAMILY SSF51412 1 477 4.06E-125 T 12-10-2018 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 Gene3D G3DSA:3.20.20.70 1 486 3.5E-211 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 SMART SM01240 7 473 0.0 T 12-10-2018 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.9E-196 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 SUPERFAMILY SSF54631 93 203 1.39E-26 T 12-10-2018 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 SMART SM00116 158 206 3.1E-5 T 12-10-2018 IPR000644 CBS domain K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 SMART SM00116 96 144 5.6E-12 T 12-10-2018 IPR000644 CBS domain K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 Pfam PF00571 CBS domain 149 201 3.8E-4 T 12-10-2018 IPR000644 CBS domain K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 Pfam PF00571 CBS domain 89 140 2.7E-10 T 12-10-2018 IPR000644 CBS domain K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.061 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 K04M3_05900 be0c82b3e5e57fb7a16b73b6acf587a8 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.4E-162 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 SUPERFAMILY SSF82866 791 1019 9.02E-49 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:3.30.70.1430 46 803 3.1E-252 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:3.30.70.1440 660 856 3.1E-252 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:1.20.1640.10 502 1013 3.1E-252 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:3.30.70.1320 139 327 3.1E-252 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:1.20.1640.10 16 501 3.1E-252 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 SUPERFAMILY SSF82714 719 793 4.71E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:3.30.2090.10 180 270 3.1E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 SUPERFAMILY SSF82693 46 138 8.37E-19 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 9.0E-160 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:3.30.2090.10 708 795 3.1E-252 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.2E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.2E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.2E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 Gene3D G3DSA:3.30.70.1430 559 659 3.1E-252 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 SUPERFAMILY SSF82866 292 488 3.53E-37 T 12-10-2018 K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 SUPERFAMILY SSF82714 185 266 8.37E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_46530 feb060d8c262ce125c4ac8717f7fc900 1052 SUPERFAMILY SSF82693 150 325 9.16E-10 T 12-10-2018 K04M3_32910 f5402e0e9196e49915a49d0556218c29 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 8.6E-105 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 K04M3_32910 f5402e0e9196e49915a49d0556218c29 185 Gene3D G3DSA:3.40.30.10 1 184 6.0E-63 T 12-10-2018 K04M3_32910 f5402e0e9196e49915a49d0556218c29 185 PIRSF PIRSF000239 1 185 7.3E-54 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_32910 f5402e0e9196e49915a49d0556218c29 185 SUPERFAMILY SSF52833 2 184 4.54E-56 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_32910 f5402e0e9196e49915a49d0556218c29 185 Pfam PF00578 AhpC/TSA family 4 131 3.1E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_32910 f5402e0e9196e49915a49d0556218c29 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_10940 ee8f01409cb60e8ee997f0146ed7515d 289 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.924 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 K04M3_10940 ee8f01409cb60e8ee997f0146ed7515d 289 Gene3D G3DSA:3.30.2010.10 68 161 3.0E-37 T 12-10-2018 K04M3_10940 ee8f01409cb60e8ee997f0146ed7515d 289 Pfam PF01435 Peptidase family M48 78 286 4.5E-41 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 K04M3_21740 37a87b847eb05ead5fd8ad6fb0562f32 111 Pfam PF00462 Glutaredoxin 16 80 4.4E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 K04M3_21740 37a87b847eb05ead5fd8ad6fb0562f32 111 SUPERFAMILY SSF52833 1 104 3.67E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_21740 37a87b847eb05ead5fd8ad6fb0562f32 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.7E-46 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related K04M3_21740 37a87b847eb05ead5fd8ad6fb0562f32 111 PIRSF PIRSF005894 1 107 1.1E-51 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 K04M3_21740 37a87b847eb05ead5fd8ad6fb0562f32 111 Gene3D G3DSA:3.40.30.10 2 106 9.2E-31 T 12-10-2018 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 Gene3D G3DSA:3.40.50.1010 1 166 3.8E-52 T 12-10-2018 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 156 6.5E-31 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 SUPERFAMILY SSF47807 164 258 3.44E-21 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 257 1.9E-23 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 SMART SM00279 167 202 7.7E-10 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 Gene3D G3DSA:1.10.150.20 167 254 2.5E-22 T 12-10-2018 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 SMART SM00475 3 254 1.7E-70 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 SUPERFAMILY SSF88723 4 164 3.48E-39 T 12-10-2018 IPR029060 PIN-like domain superfamily K04M3_06740 ddceb2efa42532d89157ff6cec63eccc 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.521 T 12-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 Gene3D G3DSA:2.10.109.10 84 206 5.4E-44 T 12-10-2018 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.663 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 7.4E-81 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 Pfam PF00717 Peptidase S24-like 118 183 1.8E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 Pfam PF01726 LexA DNA binding domain 1 65 4.4E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 SUPERFAMILY SSF46785 3 69 3.14E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 Gene3D G3DSA:1.10.10.10 1 69 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_30930 0b2d96273408e5d848b26cdde29c1e08 206 SUPERFAMILY SSF51306 79 202 2.96E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily K04M3_23600 435a414693638728a2e12d19278e47b9 402 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.6E-69 T 12-10-2018 IPR018642 Protein of unknown function DUF2066 K04M3_34130 50b239469584fd3b3e200cca66622c81 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 218 2.0E-52 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 K04M3_34130 50b239469584fd3b3e200cca66622c81 223 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 222 29.435 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 K04M3_13090 c67c796418d35ddbc2e51a53f918d3e4 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 181 5.1E-49 T 12-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 K04M3_13090 c67c796418d35ddbc2e51a53f918d3e4 204 SUPERFAMILY SSF53254 1 188 1.58E-37 T 12-10-2018 IPR029033 Histidine phosphatase superfamily K04M3_13090 c67c796418d35ddbc2e51a53f918d3e4 204 SMART SM00855 5 154 2.0E-12 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 K04M3_13090 c67c796418d35ddbc2e51a53f918d3e4 204 Gene3D G3DSA:3.40.50.1240 1 204 4.8E-60 T 12-10-2018 IPR029033 Histidine phosphatase superfamily K04M3_13090 c67c796418d35ddbc2e51a53f918d3e4 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 187 6.8E-38 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.2E-98 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.8E-30 T 12-10-2018 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 SUPERFAMILY SSF118215 29 441 1.22E-91 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_13040 dfdd167da1a6ee634a321a8dd7cd9a34 457 Gene3D G3DSA:1.10.3860.10 4 456 1.8E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 SUPERFAMILY SSF53850 90 288 1.18E-42 T 12-10-2018 K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 SUPERFAMILY SSF46785 1 85 4.38E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 Pfam PF03466 LysR substrate binding domain 89 287 8.5E-45 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 Gene3D G3DSA:1.10.10.10 1 83 7.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_13170 33884f194243f52f5a790fb88fd2373a 289 Gene3D G3DSA:3.40.190.290 90 289 2.7E-47 T 12-10-2018 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 SUPERFAMILY SSF53681 112 262 1.24E-33 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 2.7E-27 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 Gene3D G3DSA:3.40.50.1860 11 237 2.3E-82 T 12-10-2018 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.715 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 232 2.0E-68 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 Gene3D G3DSA:3.40.50.1860 99 208 2.3E-82 T 12-10-2018 K04M3_30840 ac664b952748966766a5b03948cc5aec 267 SUPERFAMILY SSF53681 8 108 3.4E-31 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_17040 3eff0b377c4554afdcf33415402f00db 398 SUPERFAMILY SSF54506 9 186 6.98E-71 T 12-10-2018 K04M3_17040 3eff0b377c4554afdcf33415402f00db 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 10 395 9.3E-234 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 K04M3_17040 3eff0b377c4554afdcf33415402f00db 398 SUPERFAMILY SSF54506 191 395 1.08E-75 T 12-10-2018 K04M3_17040 3eff0b377c4554afdcf33415402f00db 398 Gene3D G3DSA:3.10.310.10 186 376 2.2E-148 T 12-10-2018 K04M3_17040 3eff0b377c4554afdcf33415402f00db 398 Pfam PF04303 PrpF protein 11 393 1.2E-175 T 12-10-2018 IPR007400 PrpF protein K04M3_17040 3eff0b377c4554afdcf33415402f00db 398 Gene3D G3DSA:3.10.310.10 16 390 2.2E-148 T 12-10-2018 K04M3_37340 62d0f8060676ca5ee87d2336c6f4349f 208 Pfam PF00691 OmpA family 104 198 2.1E-17 T 12-10-2018 IPR006665 OmpA-like domain K04M3_37340 62d0f8060676ca5ee87d2336c6f4349f 208 PRINTS PR01021 OMPA domain signature 104 126 1.6E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_37340 62d0f8060676ca5ee87d2336c6f4349f 208 PRINTS PR01021 OMPA domain signature 134 149 1.6E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_37340 62d0f8060676ca5ee87d2336c6f4349f 208 PRINTS PR01021 OMPA domain signature 149 165 1.6E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_37340 62d0f8060676ca5ee87d2336c6f4349f 208 Gene3D G3DSA:3.30.1330.60 67 207 2.2E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_37340 62d0f8060676ca5ee87d2336c6f4349f 208 SUPERFAMILY SSF103088 92 204 2.88E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.651 T 12-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 9.9E-44 T 12-10-2018 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 SMART SM00354 1 71 1.3E-38 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 Gene3D G3DSA:3.40.50.2300 161 323 1.6E-91 T 12-10-2018 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 Gene3D G3DSA:1.10.260.40 3 59 9.1E-25 T 12-10-2018 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 SUPERFAMILY SSF53822 60 331 7.85E-95 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 Gene3D G3DSA:3.40.50.2300 69 322 1.6E-91 T 12-10-2018 K04M3_10190 d6516012bdc902ca74146aa8f5abeb40 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 SMART SM00354 1 71 2.4E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 Gene3D G3DSA:3.40.50.2300 160 289 1.7E-80 T 12-10-2018 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 12-10-2018 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 SUPERFAMILY SSF53822 60 332 6.28E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 Gene3D G3DSA:3.40.50.2300 56 306 1.7E-80 T 12-10-2018 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 4.2E-40 T 12-10-2018 K04M3_02590 4aff51c9c946af52b5c3d8fe5c986f84 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 K04M3_36660 da83d465c4d8dd76d27c6fbce01d8320 463 Gene3D G3DSA:1.20.1600.10 40 448 6.5E-42 T 12-10-2018 K04M3_36660 da83d465c4d8dd76d27c6fbce01d8320 463 Pfam PF02321 Outer membrane efflux protein 267 446 1.2E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_36660 da83d465c4d8dd76d27c6fbce01d8320 463 Pfam PF02321 Outer membrane efflux protein 48 230 6.4E-5 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_36660 da83d465c4d8dd76d27c6fbce01d8320 463 SUPERFAMILY SSF56954 14 448 8.5E-50 T 12-10-2018 K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 Gene3D G3DSA:3.20.20.10 15 242 1.4E-140 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.8E-160 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 2.8E-4 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 SUPERFAMILY SSF51419 14 242 3.92E-41 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 PIRSF PIRSF038941 1 372 7.4E-125 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 Gene3D G3DSA:2.40.37.10 7 372 1.4E-140 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_19990 d2591b7cd6e3f1103587a5b414f3af47 377 SUPERFAMILY SSF50621 212 358 7.74E-23 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 K04M3_03060 e0aedc6e21213b6124f411ce6aee5374 242 Pfam PF00005 ABC transporter 30 185 5.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_03060 e0aedc6e21213b6124f411ce6aee5374 242 Gene3D G3DSA:3.40.50.300 6 232 1.6E-52 T 12-10-2018 K04M3_03060 e0aedc6e21213b6124f411ce6aee5374 242 SUPERFAMILY SSF52540 5 229 7.99E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03060 e0aedc6e21213b6124f411ce6aee5374 242 SMART SM00382 35 233 5.8E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_17150 d5b9a3979b7c7d4152e468db74d2daf1 323 Gene3D G3DSA:3.40.190.10 118 256 3.1E-109 T 12-10-2018 K04M3_17150 d5b9a3979b7c7d4152e468db74d2daf1 323 Gene3D G3DSA:3.40.190.10 31 320 3.1E-109 T 12-10-2018 K04M3_17150 d5b9a3979b7c7d4152e468db74d2daf1 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 320 1.5E-120 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family K04M3_17150 d5b9a3979b7c7d4152e468db74d2daf1 323 Pfam PF16868 NMT1-like family 31 320 2.6E-97 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family K04M3_17150 d5b9a3979b7c7d4152e468db74d2daf1 323 SUPERFAMILY SSF53850 27 322 2.44E-90 T 12-10-2018 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 SMART SM00382 206 345 5.1E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Gene3D G3DSA:1.20.58.760 419 626 2.4E-73 T 12-10-2018 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Gene3D G3DSA:1.10.8.60 345 418 2.2E-27 T 12-10-2018 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 SUPERFAMILY SSF140990 424 618 9.42E-76 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 123 615 1.9E-243 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 SUPERFAMILY SSF52540 165 413 1.02E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Gene3D G3DSA:3.40.50.300 158 344 3.2E-70 T 12-10-2018 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 342 5.5E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Pfam PF01434 Peptidase family M41 404 613 5.6E-82 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Pfam PF06480 FtsH Extracellular 26 115 1.1E-11 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 631 37.387 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 Gene3D G3DSA:2.40.50.920 45 121 3.7E-29 T 12-10-2018 K04M3_25710 b57d78150d0f780e71bb5fc64adc8c93 678 ProSitePatterns PS00674 AAA-protein family signature. 313 331 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 K04M3_03820 487940d6ce811c9c8c95544f67411097 119 SMART SM00905 6 116 1.3E-47 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 K04M3_03820 487940d6ce811c9c8c95544f67411097 119 SUPERFAMILY SSF55620 3 118 2.72E-37 T 12-10-2018 K04M3_03820 487940d6ce811c9c8c95544f67411097 119 Gene3D G3DSA:3.30.1130.10 1 119 1.8E-45 T 12-10-2018 K04M3_03820 487940d6ce811c9c8c95544f67411097 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 118 2.2E-36 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 K04M3_03820 487940d6ce811c9c8c95544f67411097 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 5.3E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 K04M3_03820 487940d6ce811c9c8c95544f67411097 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 4.7E-30 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 K04M3_02300 8d029443a340e1d856fed1afc0ce55e7 80 Pfam PF06005 Cell division protein ZapB 1 78 1.4E-25 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 K04M3_02300 8d029443a340e1d856fed1afc0ce55e7 80 Gene3D G3DSA:1.20.5.340 1 79 1.5E-29 T 12-10-2018 K04M3_02300 8d029443a340e1d856fed1afc0ce55e7 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.126 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 Gene3D G3DSA:3.40.50.720 144 250 3.9E-14 T 12-10-2018 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 Gene3D G3DSA:3.50.50.60 251 406 2.7E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 Gene3D G3DSA:1.10.1060.10 10 143 4.2E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 2.6E-198 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 SUPERFAMILY SSF51971 143 407 2.88E-66 T 12-10-2018 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 3.0E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 SUPERFAMILY SSF46548 2 155 3.4E-36 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 12-10-2018 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 12-10-2018 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 12-10-2018 K04M3_04530 7dfe3296f91e0f10c223e5ba1c6a1c9b 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 12-10-2018 K04M3_36790 f4651bb33a16d35bf98bac22c3825ec2 209 SUPERFAMILY SSF51569 3 207 8.79E-70 T 12-10-2018 K04M3_36790 f4651bb33a16d35bf98bac22c3825ec2 209 Pfam PF01081 KDPG and KHG aldolase 7 200 1.1E-76 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_36790 f4651bb33a16d35bf98bac22c3825ec2 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_36790 f4651bb33a16d35bf98bac22c3825ec2 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 207 1.7E-84 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_36790 f4651bb33a16d35bf98bac22c3825ec2 209 Gene3D G3DSA:3.20.20.70 1 209 2.2E-76 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_36790 f4651bb33a16d35bf98bac22c3825ec2 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_33850 2229f7a6b0c78aab9ef19bf37c6c138c 421 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 3.6E-14 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 K04M3_02190 4c264073793966a8eb022a526ac6ca6d 253 Gene3D G3DSA:3.90.550.10 1 244 1.9E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_02190 4c264073793966a8eb022a526ac6ca6d 253 Pfam PF00535 Glycosyl transferase family 2 8 169 1.1E-28 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_02190 4c264073793966a8eb022a526ac6ca6d 253 SUPERFAMILY SSF53448 6 228 9.0E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_25680 8e732754c4b44f5408e3da6bf3c4d778 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.1E-43 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 K04M3_25680 8e732754c4b44f5408e3da6bf3c4d778 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.1E-43 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 K04M3_25680 8e732754c4b44f5408e3da6bf3c4d778 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.1E-43 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 K04M3_25680 8e732754c4b44f5408e3da6bf3c4d778 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.1E-43 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 K04M3_25680 8e732754c4b44f5408e3da6bf3c4d778 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 3.8E-21 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 K04M3_25680 8e732754c4b44f5408e3da6bf3c4d778 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.8E-24 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 K04M3_39360 d82171fbbc924e4e2a67a90e90827365 543 SMART SM00304 211 265 3.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_39360 d82171fbbc924e4e2a67a90e90827365 543 SUPERFAMILY SSF58104 239 542 6.41E-74 T 12-10-2018 K04M3_39360 d82171fbbc924e4e2a67a90e90827365 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 6.1E-19 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain K04M3_39360 d82171fbbc924e4e2a67a90e90827365 543 SMART SM00283 273 541 4.9E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_39360 d82171fbbc924e4e2a67a90e90827365 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 506 7.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_39360 d82171fbbc924e4e2a67a90e90827365 543 Gene3D G3DSA:1.10.287.950 211 543 2.8E-76 T 12-10-2018 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 SUPERFAMILY SSF81271 279 360 4.36E-37 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.3E-170 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 8.0E-40 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 PIRSF PIRSF006641 1 363 4.2E-158 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:3.10.20.30 48 362 3.2E-151 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:1.10.150.300 120 200 3.2E-151 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:3.40.50.300 4 278 3.2E-151 T 12-10-2018 K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 SUPERFAMILY SSF52540 3 301 6.99E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_07310 0e080b36246df5ebebb34f0e62a2563a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.377 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 K04M3_29390 703e297950733dea45da80ff378ff20b 338 SUPERFAMILY SSF52374 5 334 2.33E-90 T 12-10-2018 K04M3_29390 703e297950733dea45da80ff378ff20b 338 Gene3D G3DSA:1.10.240.10 191 304 1.2E-139 T 12-10-2018 K04M3_29390 703e297950733dea45da80ff378ff20b 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.698 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 K04M3_29390 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_29390 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_29390 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_29390 703e297950733dea45da80ff378ff20b 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_29390 703e297950733dea45da80ff378ff20b 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 4.4E-77 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_29390 703e297950733dea45da80ff378ff20b 338 Gene3D G3DSA:3.40.50.620 5 333 1.2E-139 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_29390 703e297950733dea45da80ff378ff20b 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.9E-108 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 K04M3_23750 39b2fe708ae93d4d8bfa313c13c29557 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.605 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 K04M3_23750 39b2fe708ae93d4d8bfa313c13c29557 154 SUPERFAMILY SSF53098 3 143 1.64E-58 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_23750 39b2fe708ae93d4d8bfa313c13c29557 154 Gene3D G3DSA:3.30.420.10 1 154 9.5E-61 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_23750 39b2fe708ae93d4d8bfa313c13c29557 154 Pfam PF00075 RNase H 3 141 2.9E-54 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 7.9E-120 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 Pfam PF00326 Prolyl oligopeptidase family 459 674 3.3E-70 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 Gene3D G3DSA:3.40.50.1820 12 642 1.0E-243 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 2.2E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 2.2E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 2.2E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 2.2E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 2.2E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 2.2E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 SUPERFAMILY SSF50993 1 408 4.71E-95 T 12-10-2018 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 Gene3D G3DSA:2.130.10.120 70 403 1.0E-243 T 12-10-2018 K04M3_34960 20144bbf3381fa48b715d62f3b467810 677 SUPERFAMILY SSF53474 411 653 9.73E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_17830 9a0e0cc3b5035f72409799e8c5549b60 286 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 227 1.8E-33 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_17830 9a0e0cc3b5035f72409799e8c5549b60 286 Gene3D G3DSA:2.40.30.170 168 286 4.2E-28 T 12-10-2018 K04M3_17830 9a0e0cc3b5035f72409799e8c5549b60 286 Gene3D G3DSA:2.40.50.100 41 109 8.5E-13 T 12-10-2018 K04M3_17830 9a0e0cc3b5035f72409799e8c5549b60 286 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 228 2.5E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_17830 9a0e0cc3b5035f72409799e8c5549b60 286 SUPERFAMILY SSF111369 38 237 1.57E-26 T 12-10-2018 K04M3_42990 8a2e7cf1a238faed3cbd4632992f5d46 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 2.0E-124 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 K04M3_42990 8a2e7cf1a238faed3cbd4632992f5d46 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 1.6E-140 T 12-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 Gene3D G3DSA:1.25.40.10 235 405 3.1E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 Gene3D G3DSA:3.30.70.270 470 637 1.2E-47 T 12-10-2018 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 630 1.5E-36 T 12-10-2018 IPR000160 GGDEF domain K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 470 631 4.9E-40 T 12-10-2018 IPR000160 GGDEF domain K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SUPERFAMILY SSF55073 477 634 1.02E-39 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SMART SM00267 461 634 8.8E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SUPERFAMILY SSF48452 110 230 4.68E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SUPERFAMILY SSF48452 194 413 1.37E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SMART SM00028 195 228 100.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SMART SM00028 155 188 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SMART SM00028 239 272 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SMART SM00028 319 352 40.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 SMART SM00028 361 394 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 Gene3D G3DSA:1.25.40.10 104 234 2.6E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_38750 398dabc4c77c6a1220bbe845a58d3ce8 637 Pfam PF13374 Tetratricopeptide repeat 194 225 0.0041 T 12-10-2018 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 SUPERFAMILY SSF53850 89 295 3.41E-44 T 12-10-2018 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 Gene3D G3DSA:1.10.10.10 3 86 4.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 SUPERFAMILY SSF46785 3 112 1.33E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.5E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 Gene3D G3DSA:3.40.190.10 91 289 9.0E-67 T 12-10-2018 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 Gene3D G3DSA:3.40.190.10 163 264 9.0E-67 T 12-10-2018 K04M3_39310 c7f0e6713cbfe2fb6a44a9ca79fc1e30 300 Pfam PF03466 LysR substrate binding domain 89 292 2.4E-42 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_42970 16a7c2e98b4e676da59cb836d17756da 182 SUPERFAMILY SSF55729 1 155 5.15E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_42970 16a7c2e98b4e676da59cb836d17756da 182 Gene3D G3DSA:3.40.630.30 2 169 4.0E-31 T 12-10-2018 K04M3_42970 16a7c2e98b4e676da59cb836d17756da 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 4.1E-14 T 12-10-2018 IPR000182 GNAT domain K04M3_14670 d542081e19c2970c623a269817e27387 177 Gene3D G3DSA:3.40.630.30 20 177 8.6E-43 T 12-10-2018 K04M3_14670 d542081e19c2970c623a269817e27387 177 SUPERFAMILY SSF55729 23 142 2.66E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_14670 d542081e19c2970c623a269817e27387 177 Pfam PF00583 Acetyltransferase (GNAT) family 57 142 3.1E-15 T 12-10-2018 IPR000182 GNAT domain K04M3_14670 d542081e19c2970c623a269817e27387 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 176 1.2E-67 T 12-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.918 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.6E-138 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_07750 42f8359e125426cdd094bfd7e90f1e9e 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 K04M3_11420 dc69f4a57abccdd239c13c7480604b61 320 SUPERFAMILY SSF161098 69 298 2.94E-20 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_11420 dc69f4a57abccdd239c13c7480604b61 320 Gene3D G3DSA:1.10.3720.10 69 308 1.8E-23 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_11420 dc69f4a57abccdd239c13c7480604b61 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.1E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_19920 1dfb2860fa724faf969127a9099fe4a6 242 Pfam PF13489 Methyltransferase domain 59 208 4.1E-24 T 12-10-2018 K04M3_19920 1dfb2860fa724faf969127a9099fe4a6 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 18 242 36.466 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 K04M3_19920 1dfb2860fa724faf969127a9099fe4a6 242 Gene3D G3DSA:3.40.50.150 18 242 9.1E-74 T 12-10-2018 K04M3_19920 1dfb2860fa724faf969127a9099fe4a6 242 SUPERFAMILY SSF53335 22 239 1.82E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_19920 1dfb2860fa724faf969127a9099fe4a6 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 18 236 1.9E-84 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 K04M3_49190 efcac597254bdf8d3052f0af557ef304 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 464 4.1E-182 T 12-10-2018 IPR004672 Na+/H+ antiporter NhaD K04M3_49190 efcac597254bdf8d3052f0af557ef304 476 Pfam PF03600 Citrate transporter 45 420 1.3E-53 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 K04M3_18420 97a2fcf3414ad84dd0caf0ed2f5e84a2 280 Gene3D G3DSA:1.10.150.130 181 270 2.5E-5 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 Pfam PF01048 Phosphorylase superfamily 24 270 4.8E-43 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 SUPERFAMILY SSF53167 12 272 5.15E-82 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 7.1E-99 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 24 271 4.4E-122 T 12-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 PIRSF PIRSF000477 2 273 3.6E-103 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 K04M3_00560 681120ade1c4d08d18fb351fc335bca2 274 Gene3D G3DSA:3.40.50.1580 2 273 8.3E-102 T 12-10-2018 K04M3_42180 c9a05abbece68236bca2b172b527a884 265 SUPERFAMILY SSF161098 60 245 8.5E-46 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_42180 c9a05abbece68236bca2b172b527a884 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 4.2E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_42180 c9a05abbece68236bca2b172b527a884 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 2.6E-26 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_42180 c9a05abbece68236bca2b172b527a884 265 Gene3D G3DSA:1.10.3720.10 50 260 2.5E-54 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_20630 db88d2e831367c0661f281df41620b51 251 SUPERFAMILY SSF53335 15 250 6.26E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_20630 db88d2e831367c0661f281df41620b51 251 Gene3D G3DSA:3.40.50.150 15 248 1.8E-41 T 12-10-2018 K04M3_20630 db88d2e831367c0661f281df41620b51 251 Gene3D G3DSA:2.20.25.110 144 209 1.8E-41 T 12-10-2018 K04M3_20630 db88d2e831367c0661f281df41620b51 251 Pfam PF13649 Methyltransferase domain 42 136 2.1E-18 T 12-10-2018 K04M3_24460 21f0578d0944e82a6a65bee031b71c97 460 SUPERFAMILY SSF52540 20 357 2.22E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_24460 21f0578d0944e82a6a65bee031b71c97 460 Gene3D G3DSA:3.40.50.300 180 379 5.9E-24 T 12-10-2018 K04M3_24460 21f0578d0944e82a6a65bee031b71c97 460 SMART SM00487 2 179 0.005 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_24460 21f0578d0944e82a6a65bee031b71c97 460 Gene3D G3DSA:3.40.50.300 1 170 5.1E-14 T 12-10-2018 K04M3_24460 21f0578d0944e82a6a65bee031b71c97 460 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.0E-10 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 K04M3_24460 21f0578d0944e82a6a65bee031b71c97 460 Pfam PF00271 Helicase conserved C-terminal domain 263 353 8.7E-5 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 Gene3D G3DSA:3.40.190.10 113 205 1.8E-75 T 12-10-2018 K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 245 2.3E-82 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 Gene3D G3DSA:3.40.190.10 30 244 1.8E-75 T 12-10-2018 K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 8.8E-64 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 SMART SM00079 26 247 0.0052 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 SMART SM00062 26 247 1.8E-71 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_38470 4f9a2d2615a4b1a2a2fb0eea41880930 247 SUPERFAMILY SSF53850 1 246 3.77E-68 T 12-10-2018 K04M3_16080 c03a1c301d880a70eb0bb4b5b710d00f 315 Pfam PF00582 Universal stress protein family 4 148 8.7E-16 T 12-10-2018 IPR006016 UspA K04M3_16080 c03a1c301d880a70eb0bb4b5b710d00f 315 Pfam PF00582 Universal stress protein family 179 301 1.2E-14 T 12-10-2018 IPR006016 UspA K04M3_16080 c03a1c301d880a70eb0bb4b5b710d00f 315 SUPERFAMILY SSF52402 4 157 5.44E-27 T 12-10-2018 K04M3_16080 c03a1c301d880a70eb0bb4b5b710d00f 315 Gene3D G3DSA:3.40.50.12370 1 313 9.9E-113 T 12-10-2018 K04M3_16080 c03a1c301d880a70eb0bb4b5b710d00f 315 SUPERFAMILY SSF52402 166 308 4.86E-23 T 12-10-2018 K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 Pfam PF13616 PPIC-type PPIASE domain 263 361 9.5E-25 T 12-10-2018 K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 Gene3D G3DSA:1.10.4030.30 39 199 1.8E-14 T 12-10-2018 K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 SUPERFAMILY SSF109998 39 243 4.97E-38 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 SUPERFAMILY SSF54534 225 361 2.49E-31 T 12-10-2018 K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 Gene3D G3DSA:3.10.50.40 261 386 2.9E-33 T 12-10-2018 K04M3_09160 7cb7f09e2a39bc31df1dd48ab1eb702e 619 Pfam PF13624 SurA N-terminal domain 1 166 3.6E-51 T 12-10-2018 K04M3_18230 e71633fe91510de615bdf0b447d478e9 114 Gene3D G3DSA:3.30.70.100 1 93 7.0E-23 T 12-10-2018 K04M3_18230 e71633fe91510de615bdf0b447d478e9 114 SUPERFAMILY SSF54909 1 100 9.91E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_18230 e71633fe91510de615bdf0b447d478e9 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 72 7.8E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain K04M3_32190 97b8817f5529b37b3bc394b8b371c702 246 Gene3D G3DSA:1.10.3720.10 32 242 1.6E-55 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_32190 97b8817f5529b37b3bc394b8b371c702 246 SUPERFAMILY SSF161098 41 227 4.58E-46 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_32190 97b8817f5529b37b3bc394b8b371c702 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 6.7E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_32190 97b8817f5529b37b3bc394b8b371c702 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 242 2.0E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Gene3D G3DSA:3.30.1370.120 188 258 3.4E-20 T 12-10-2018 IPR038591 NolW-like superfamily K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Gene3D G3DSA:3.30.1370.120 263 341 1.3E-16 T 12-10-2018 IPR038591 NolW-like superfamily K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR01032 Gene IV protein signature 590 612 3.2E-13 T 12-10-2018 K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR01032 Gene IV protein signature 537 565 3.2E-13 T 12-10-2018 K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR01032 Gene IV protein signature 469 492 3.2E-13 T 12-10-2018 K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 12-10-2018 IPR005644 NolW-like K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.7E-16 T 12-10-2018 IPR005644 NolW-like K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 1.7E-17 T 12-10-2018 IPR005644 NolW-like K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 479 489 2.7E-37 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 468 2.7E-37 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 2.7E-37 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 574 592 2.7E-37 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 611 2.7E-37 T 12-10-2018 IPR001775 GspD/PilQ family K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Pfam PF00263 Bacterial type II and III secretion system protein 448 610 5.2E-51 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 Gene3D G3DSA:3.30.1370.120 21 185 2.1E-52 T 12-10-2018 IPR038591 NolW-like superfamily K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 619 1.4E-158 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 K04M3_01190 00b07fd2483a9c257b774937b6b91f09 672 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 555 588 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 K04M3_48230 cbf7705156bb4678295553d7eeef23c9 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 1.3E-47 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 K04M3_03320 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03320 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_03320 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03320 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_03320 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.0E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_44020 7d10d460e898f600e4646211d8a8cc1f 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_44020 7d10d460e898f600e4646211d8a8cc1f 273 Pfam PF00005 ABC transporter 31 179 2.9E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_44020 7d10d460e898f600e4646211d8a8cc1f 273 Gene3D G3DSA:3.40.50.300 10 253 2.3E-57 T 12-10-2018 K04M3_44020 7d10d460e898f600e4646211d8a8cc1f 273 SMART SM00382 40 236 1.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_44020 7d10d460e898f600e4646211d8a8cc1f 273 SUPERFAMILY SSF52540 13 251 6.91E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_47340 02586a493c04dc324f9c7b0be756d0e8 466 Gene3D G3DSA:3.50.50.60 30 394 8.7E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_47340 02586a493c04dc324f9c7b0be756d0e8 466 SUPERFAMILY SSF51905 17 308 2.85E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_47340 02586a493c04dc324f9c7b0be756d0e8 466 Gene3D G3DSA:3.30.9.10 124 354 8.7E-61 T 12-10-2018 K04M3_47340 02586a493c04dc324f9c7b0be756d0e8 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 3.9E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_47340 02586a493c04dc324f9c7b0be756d0e8 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 3.1E-245 T 12-10-2018 IPR017715 Putative aminophosphonate oxidoreductase K04M3_11160 1ccda1260d1f240a14cd34f3f81ac947 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.3E-79 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 K04M3_11160 1ccda1260d1f240a14cd34f3f81ac947 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.983 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 K04M3_11160 1ccda1260d1f240a14cd34f3f81ac947 257 SUPERFAMILY SSF51366 1 256 1.33E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_11160 1ccda1260d1f240a14cd34f3f81ac947 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 6.7E-115 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 K04M3_11160 1ccda1260d1f240a14cd34f3f81ac947 257 Gene3D G3DSA:3.20.20.70 1 257 2.2E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 Gene3D G3DSA:1.10.10.60 173 283 5.6E-30 T 12-10-2018 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 SUPERFAMILY SSF46689 229 277 6.27E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 SMART SM00342 193 276 7.7E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 7.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 7.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 SUPERFAMILY SSF46689 178 226 3.58E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.4E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_17560 56bdcd61c6e7d7e7a1b842236b7d7319 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_26830 1d062ed0d8210791a313775d137558a3 244 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 1.6E-100 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 K04M3_26830 1d062ed0d8210791a313775d137558a3 244 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.6E-106 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 K04M3_26830 1d062ed0d8210791a313775d137558a3 244 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 134.734 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 K04M3_26830 1d062ed0d8210791a313775d137558a3 244 SUPERFAMILY SSF63892 4 242 9.42E-104 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 K04M3_26830 1d062ed0d8210791a313775d137558a3 244 Gene3D G3DSA:3.20.20.70 1 244 2.5E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_08600 9797c864292531c66b2650b0fb32950e 646 Gene3D G3DSA:3.40.50.300 443 636 4.8E-36 T 12-10-2018 K04M3_08600 9797c864292531c66b2650b0fb32950e 646 Gene3D G3DSA:3.40.50.300 19 287 2.1E-49 T 12-10-2018 K04M3_08600 9797c864292531c66b2650b0fb32950e 646 SMART SM00491 477 606 5.7E-46 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 K04M3_08600 9797c864292531c66b2650b0fb32950e 646 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 1.7E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 K04M3_08600 9797c864292531c66b2650b0fb32950e 646 SUPERFAMILY SSF52540 42 602 2.83E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08600 9797c864292531c66b2650b0fb32950e 646 SMART SM00487 17 302 0.004 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_08600 9797c864292531c66b2650b0fb32950e 646 SUPERFAMILY SSF52540 14 236 1.44E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08600 9797c864292531c66b2650b0fb32950e 646 Pfam PF13307 Helicase C-terminal domain 462 619 8.3E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 K04M3_30390 1ba5d3627ce7893333b13d4a0690a7ff 520 SUPERFAMILY SSF46894 6 103 6.52E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_30390 1ba5d3627ce7893333b13d4a0690a7ff 520 Gene3D G3DSA:1.10.10.10 5 106 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_30390 1ba5d3627ce7893333b13d4a0690a7ff 520 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 3.2E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_30390 1ba5d3627ce7893333b13d4a0690a7ff 520 Gene3D G3DSA:1.25.40.10 351 513 3.0E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_30390 1ba5d3627ce7893333b13d4a0690a7ff 520 SMART SM00862 24 100 1.9E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_22370 e34959cdba291511a6bc2feeec9d5591 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 1.4E-72 T 12-10-2018 IPR007411 Elongation factor P hydroxylase K04M3_17940 653db546328944d8ccf7742e614149cf 208 Pfam PF01810 LysE type translocator 15 204 7.4E-29 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_49990 d301bee99c6c824dd17cf973420247d6 123 Gene3D G3DSA:1.10.260.40 54 123 3.0E-5 T 12-10-2018 K04M3_49990 d301bee99c6c824dd17cf973420247d6 123 SUPERFAMILY SSF47413 58 115 3.1E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_11780 611f852f07da50f61cca3c08a821a845 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 1.1E-117 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 K04M3_11780 611f852f07da50f61cca3c08a821a845 400 SUPERFAMILY SSF103473 8 398 1.31E-64 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_11780 611f852f07da50f61cca3c08a821a845 400 Gene3D G3DSA:1.20.1720.10 17 396 2.7E-101 T 12-10-2018 K04M3_11780 611f852f07da50f61cca3c08a821a845 400 Pfam PF07690 Major Facilitator Superfamily 24 364 3.0E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 SUPERFAMILY SSF69349 450 602 6.28E-36 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 Gene3D G3DSA:3.55.50.10 109 199 1.0E-68 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 SUPERFAMILY SSF69279 213 372 7.14E-9 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 1.2E-110 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 Gene3D G3DSA:2.40.50.230 363 465 1.7E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 334 5.3E-71 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 1.3E-168 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 SUPERFAMILY SSF69255 372 460 7.59E-33 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 Gene3D G3DSA:3.30.1920.30 230 293 1.0E-68 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 Gene3D G3DSA:2.30.110.50 15 334 1.0E-68 T 12-10-2018 K04M3_39150 d289e230703ac404e525d2de9f8ad6da 611 SUPERFAMILY SSF69279 12 195 3.63E-43 T 12-10-2018 K04M3_20580 9aa479bb338d960e2177a94cb6f88266 404 Pfam PF02687 FtsX-like permease family 305 396 2.4E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_20580 9aa479bb338d960e2177a94cb6f88266 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 2.9E-23 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_46730 fa0876060d3a2f70dfd91f52f4fc85f9 177 Pfam PF04170 NlpE N-terminal domain 83 167 9.0E-31 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE K04M3_46730 fa0876060d3a2f70dfd91f52f4fc85f9 177 Gene3D G3DSA:2.40.128.640 70 177 2.0E-40 T 12-10-2018 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 PIRSF PIRSF006092 1 157 3.6E-48 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.7E-25 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.24 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.4E-27 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 Gene3D G3DSA:1.10.287.180 1 74 1.1E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 Gene3D G3DSA:3.10.50.30 75 157 4.4E-31 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 SUPERFAMILY SSF46557 2 75 1.83E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 5.5E-54 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 SUPERFAMILY SSF54534 81 156 3.79E-24 T 12-10-2018 K04M3_25740 3937bfa93900d93eb8a763b69c8c8d86 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 K04M3_41260 e143a042d45c7ed5aeb00ea4331f21b3 148 Gene3D G3DSA:3.40.630.30 4 148 7.6E-26 T 12-10-2018 K04M3_41260 e143a042d45c7ed5aeb00ea4331f21b3 148 Pfam PF00583 Acetyltransferase (GNAT) family 25 125 1.0E-7 T 12-10-2018 IPR000182 GNAT domain K04M3_41260 e143a042d45c7ed5aeb00ea4331f21b3 148 SUPERFAMILY SSF55729 22 127 1.67E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 Gene3D G3DSA:3.40.50.2300 3 138 5.2E-22 T 12-10-2018 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 SMART SM00421 147 204 1.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 SUPERFAMILY SSF46894 134 207 1.6E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_25260 eab6f8d2375f89bd6573b3a99ed2e097 214 Gene3D G3DSA:1.10.10.10 139 208 3.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32480 4bccdcfc1cd5fb2d379a2a5c83decf48 303 Gene3D G3DSA:3.40.190.290 92 298 4.2E-47 T 12-10-2018 K04M3_32480 4bccdcfc1cd5fb2d379a2a5c83decf48 303 SUPERFAMILY SSF53850 91 299 3.26E-36 T 12-10-2018 K04M3_32480 4bccdcfc1cd5fb2d379a2a5c83decf48 303 SUPERFAMILY SSF46785 10 112 2.8E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_32480 4bccdcfc1cd5fb2d379a2a5c83decf48 303 Pfam PF03466 LysR substrate binding domain 91 297 2.1E-34 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_32480 4bccdcfc1cd5fb2d379a2a5c83decf48 303 Gene3D G3DSA:1.10.10.10 6 90 2.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32480 4bccdcfc1cd5fb2d379a2a5c83decf48 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 8.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34780 4f669c0ebace4b803f44db894b548592 457 SUPERFAMILY SSF55874 310 440 6.3E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_34780 4f669c0ebace4b803f44db894b548592 457 SUPERFAMILY SSF47384 240 319 2.75E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_34780 4f669c0ebace4b803f44db894b548592 457 SMART SM00388 257 320 3.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_34780 4f669c0ebace4b803f44db894b548592 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 3.1E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_34780 4f669c0ebace4b803f44db894b548592 457 Gene3D G3DSA:3.30.565.10 316 454 5.9E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_34780 4f669c0ebace4b803f44db894b548592 457 Gene3D G3DSA:1.10.287.130 194 315 2.6E-12 T 12-10-2018 K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.1E-45 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 SUPERFAMILY SSF53901 1 251 1.06E-66 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 Gene3D G3DSA:3.40.47.10 258 401 2.9E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 2.9E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 Gene3D G3DSA:3.40.47.10 6 257 5.0E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 SUPERFAMILY SSF53901 213 401 7.38E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22330 62f521890c1e2c479c4fe7f7862a5381 403 SMART SM00825 Beta-ketoacyl synthase 4 403 3.1E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain K04M3_44460 f8b693f5e87d0600cb6f3db514a357d7 666 SUPERFAMILY SSF56112 43 273 7.28E-37 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_44460 f8b693f5e87d0600cb6f3db514a357d7 666 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 K04M3_44460 f8b693f5e87d0600cb6f3db514a357d7 666 Gene3D G3DSA:1.10.510.10 29 301 1.4E-34 T 12-10-2018 K04M3_44460 f8b693f5e87d0600cb6f3db514a357d7 666 SMART SM00220 46 305 3.9E-12 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 K04M3_44460 f8b693f5e87d0600cb6f3db514a357d7 666 Pfam PF00069 Protein kinase domain 61 291 5.4E-29 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 K04M3_23730 602c2a2a35d0a4ac02d232b47929c7e0 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 1.6E-137 T 12-10-2018 IPR020010 Conserved hypothetical protein CHP03503 K04M3_27970 aaed83b2d9e91628cc80973259ea29be 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.7E-27 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 K04M3_27970 aaed83b2d9e91628cc80973259ea29be 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 1.0E-28 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 K04M3_27970 aaed83b2d9e91628cc80973259ea29be 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.6E-81 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 K04M3_27970 aaed83b2d9e91628cc80973259ea29be 321 Gene3D G3DSA:1.20.58.1130 8 206 2.4E-86 T 12-10-2018 K04M3_27970 aaed83b2d9e91628cc80973259ea29be 321 Gene3D G3DSA:1.20.1420.30 35 308 2.4E-86 T 12-10-2018 K04M3_00550 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_00550 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_00550 3440538f7c593c8abc59083679965176 203 Pfam PF01081 KDPG and KHG aldolase 5 197 4.9E-73 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_00550 3440538f7c593c8abc59083679965176 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 5.5E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 K04M3_00550 3440538f7c593c8abc59083679965176 203 Gene3D G3DSA:3.20.20.70 1 203 7.4E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_00550 3440538f7c593c8abc59083679965176 203 SUPERFAMILY SSF51569 3 201 1.06E-66 T 12-10-2018 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 6.3E-26 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 PRINTS PR00050 Cold shock protein signature 7 22 1.1E-14 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-14 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-14 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 PIRSF PIRSF002599 1 69 1.7E-21 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 SMART SM00357 6 69 3.3E-25 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 Gene3D G3DSA:2.40.50.140 6 68 4.6E-27 T 12-10-2018 K04M3_23440 3c0456f0f8c47724d830530d86fce56c 69 SUPERFAMILY SSF50249 4 68 1.03E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 Gene3D G3DSA:3.40.50.300 129 312 2.5E-62 T 12-10-2018 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 Pfam PF00158 Sigma-54 interaction domain 142 308 2.1E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 SUPERFAMILY SSF46689 354 444 2.37E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 Gene3D G3DSA:1.10.10.60 403 445 1.5E-14 T 12-10-2018 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 Gene3D G3DSA:1.10.8.60 313 377 1.3E-19 T 12-10-2018 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 SUPERFAMILY SSF52540 142 380 6.76E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 SUPERFAMILY SSF52172 64 185 2.02E-9 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_00700 4601a2bf0c042fec0e702956b9f07257 447 SMART SM00382 162 305 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_19390 8693f3c15bacd4f10bf7e15f70fa3412 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 339 1.8E-73 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 K04M3_19390 8693f3c15bacd4f10bf7e15f70fa3412 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.577 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 K04M3_19390 8693f3c15bacd4f10bf7e15f70fa3412 346 Pfam PF05128 Domain of unknown function (DUF697) 181 338 1.8E-48 T 12-10-2018 IPR021147 Protein of unknown function DUF697 K04M3_35220 6cc9aa7bd44cc17f285b886426b5fee5 308 SMART SM00257 47 91 0.0011 T 12-10-2018 IPR018392 LysM domain K04M3_35220 6cc9aa7bd44cc17f285b886426b5fee5 308 SUPERFAMILY SSF54106 47 91 1.57E-6 T 12-10-2018 K04M3_35220 6cc9aa7bd44cc17f285b886426b5fee5 308 Pfam PF01476 LysM domain 48 91 1.4E-6 T 12-10-2018 IPR018392 LysM domain K04M3_35220 6cc9aa7bd44cc17f285b886426b5fee5 308 SUPERFAMILY SSF141523 102 238 6.15E-30 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like K04M3_35220 6cc9aa7bd44cc17f285b886426b5fee5 308 Pfam PF03734 L,D-transpeptidase catalytic domain 103 238 2.1E-22 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 K04M3_35220 6cc9aa7bd44cc17f285b886426b5fee5 308 Gene3D G3DSA:2.40.440.10 27 306 1.8E-84 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like K04M3_21360 1b6276c3c6b485cb3a86411b8e2c74d3 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 269 1.6E-27 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 SMART SM00267 299 465 2.4E-45 T 12-10-2018 IPR000160 GGDEF domain K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 258 2.9E-27 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 SUPERFAMILY SSF53850 41 259 6.02E-35 T 12-10-2018 K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 Gene3D G3DSA:3.40.190.10 125 221 3.2E-31 T 12-10-2018 K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 461 4.3E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 SMART SM00062 40 262 8.0E-10 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 Gene3D G3DSA:3.30.70.270 300 466 4.9E-42 T 12-10-2018 K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 Gene3D G3DSA:3.40.190.10 39 258 3.2E-31 T 12-10-2018 K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 SUPERFAMILY SSF55073 315 464 1.18E-37 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_37400 31e410637ee8c3b091b1fa50b7ff10ef 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 463 3.4E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_09490 c0aeac159aec5c2b50a324afb604d2f6 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.2E-24 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 K04M3_09490 c0aeac159aec5c2b50a324afb604d2f6 100 Gene3D G3DSA:1.10.10.10 1 100 8.3E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_09490 c0aeac159aec5c2b50a324afb604d2f6 100 SUPERFAMILY SSF46767 2 84 5.89E-25 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 Gene3D G3DSA:3.90.1280.10 225 284 1.0E-19 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 Pfam PF01430 Hsp33 protein 6 272 6.4E-78 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 PIRSF PIRSF005261 1 284 2.9E-70 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.979 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 SUPERFAMILY SSF64397 4 231 5.23E-76 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 SUPERFAMILY SSF118352 223 281 1.03E-17 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 Gene3D G3DSA:3.55.30.10 1 175 6.1E-62 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 K04M3_01160 ee9d3216a7aa9021df8854dd1f4d9f39 291 Gene3D G3DSA:1.10.287.480 178 224 1.2E-22 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily K04M3_38630 a3548a9ca9edee2569c43cbc35c3a5e4 450 SUPERFAMILY SSF53067 1 205 1.36E-25 T 12-10-2018 K04M3_38630 a3548a9ca9edee2569c43cbc35c3a5e4 450 Pfam PF00012 Hsp70 protein 129 259 1.2E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_38630 a3548a9ca9edee2569c43cbc35c3a5e4 450 Pfam PF00012 Hsp70 protein 337 440 1.7E-4 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 K04M3_38630 a3548a9ca9edee2569c43cbc35c3a5e4 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 K04M3_38630 a3548a9ca9edee2569c43cbc35c3a5e4 450 SUPERFAMILY SSF53067 208 447 1.3E-32 T 12-10-2018 K04M3_12180 60b84cb9565cb893ebd12ba7c444c7e9 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 3.0E-29 T 12-10-2018 IPR032093 Phospholipase D, N-terminal K04M3_12180 60b84cb9565cb893ebd12ba7c444c7e9 557 Pfam PF09423 PhoD-like phosphatase 136 528 1.2E-116 T 12-10-2018 IPR018946 Alkaline phosphatase D-related K04M3_12180 60b84cb9565cb893ebd12ba7c444c7e9 557 Gene3D G3DSA:2.60.40.380 29 127 1.6E-32 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 K04M3_12180 60b84cb9565cb893ebd12ba7c444c7e9 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 4.3E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_12180 60b84cb9565cb893ebd12ba7c444c7e9 557 SUPERFAMILY SSF56300 136 532 5.61E-32 T 12-10-2018 K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 142.8 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 2.6E-9 T 12-10-2018 K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 5.7E-118 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 5.5E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 Gene3D G3DSA:1.10.150.240 24 102 7.5E-97 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 SUPERFAMILY SSF56784 6 260 2.23E-52 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_47460 fda21aee14cd4183d1d340a1e17c2851 271 Gene3D G3DSA:3.40.50.1000 8 271 7.5E-97 T 12-10-2018 IPR023214 HAD superfamily K04M3_46580 13603e7ce5fe7bd676d1784111c0576b 281 SUPERFAMILY SSF48452 172 259 1.43E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_46580 13603e7ce5fe7bd676d1784111c0576b 281 Pfam PF13181 Tetratricopeptide repeat 221 252 6.8E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_46580 13603e7ce5fe7bd676d1784111c0576b 281 SMART SM00028 220 253 0.0019 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_46580 13603e7ce5fe7bd676d1784111c0576b 281 SMART SM00028 186 219 13.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_46580 13603e7ce5fe7bd676d1784111c0576b 281 Gene3D G3DSA:1.25.40.10 97 267 1.9E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_37850 b1f2a028b9bab6e835c183a644c300f6 244 SUPERFAMILY SSF55781 87 240 4.12E-32 T 12-10-2018 K04M3_37850 b1f2a028b9bab6e835c183a644c300f6 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 5.5E-14 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal K04M3_37850 b1f2a028b9bab6e835c183a644c300f6 244 SUPERFAMILY SSF46785 11 77 3.85E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_37850 b1f2a028b9bab6e835c183a644c300f6 244 Gene3D G3DSA:3.30.450.40 80 240 7.0E-59 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_37850 b1f2a028b9bab6e835c183a644c300f6 244 Pfam PF08279 HTH domain 17 56 2.0E-4 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 K04M3_37850 b1f2a028b9bab6e835c183a644c300f6 244 Gene3D G3DSA:1.10.10.10 9 79 8.9E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 SMART SM00411 1 90 1.4E-46 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 SUPERFAMILY SSF47729 1 90 3.97E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 K04M3_30440 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 Gene3D G3DSA:4.10.520.10 1 90 4.6E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 K04M3_02770 3469a8bf5a1216c2dcf4f84c3534da2b 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 12-10-2018 K04M3_02770 3469a8bf5a1216c2dcf4f84c3534da2b 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.591 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02770 3469a8bf5a1216c2dcf4f84c3534da2b 130 SUPERFAMILY SSF56047 2 129 1.96E-43 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02770 3469a8bf5a1216c2dcf4f84c3534da2b 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02770 3469a8bf5a1216c2dcf4f84c3534da2b 130 Pfam PF00410 Ribosomal protein S8 5 129 1.4E-46 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02770 3469a8bf5a1216c2dcf4f84c3534da2b 130 Gene3D G3DSA:3.30.1490.10 73 130 1.7E-24 T 12-10-2018 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 4.2E-26 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.519 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 SUPERFAMILY SSF50692 689 828 4.14E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 12-10-2018 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 12-10-2018 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 12-10-2018 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Gene3D G3DSA:2.40.40.20 705 828 2.9E-44 T 12-10-2018 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 1.6E-89 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 SUPERFAMILY SSF53706 38 646 3.14E-201 T 12-10-2018 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 K04M3_45080 c269be80976d5aaa2e93d8a38205f5cc 829 SMART SM00926 41 95 1.9E-13 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SUPERFAMILY SSF58104 318 627 3.14E-76 T 12-10-2018 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 9.6E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SMART SM00283 365 626 4.4E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:1.10.287.950 297 627 1.3E-72 T 12-10-2018 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:3.30.450.20 50 264 1.4E-53 T 12-10-2018 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Gene3D G3DSA:3.30.450.20 60 168 1.4E-53 T 12-10-2018 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SUPERFAMILY SSF103190 86 174 1.52E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SMART SM00304 296 350 3.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 SMART SM00304 353 403 5.3 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Pfam PF02743 Cache domain 40 258 3.2E-32 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_19630 0dafb57c45fe4a8a79de73c7a4e44cf6 627 Pfam PF00672 HAMP domain 300 346 2.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_30250 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_30250 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 K04M3_30250 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_30250 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_30250 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 12-10-2018 K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 6.4E-90 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 SMART SM00382 210 390 2.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.5E-210 T 12-10-2018 IPR004482 Mg chelatase-related protein K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 SUPERFAMILY SSF52540 188 501 2.7E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.2E-28 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 Gene3D G3DSA:3.40.50.300 191 500 1.5E-54 T 12-10-2018 K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 6.6E-48 T 12-10-2018 K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 Gene3D G3DSA:3.30.230.10 1 166 1.7E-5 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 SUPERFAMILY SSF54211 2 169 2.84E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 K04M3_32100 ebe26c66f62fadd043160608fd04359a 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 K04M3_10540 e9a151a3ca893b22e1bcbf3d4e91dbe8 388 SUPERFAMILY SSF56059 1 385 6.53E-84 T 12-10-2018 K04M3_10540 e9a151a3ca893b22e1bcbf3d4e91dbe8 388 Gene3D G3DSA:3.30.1490.330 264 345 2.2E-25 T 12-10-2018 K04M3_10540 e9a151a3ca893b22e1bcbf3d4e91dbe8 388 SUPERFAMILY SSF52440 174 280 4.03E-42 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_10540 e9a151a3ca893b22e1bcbf3d4e91dbe8 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 3.3E-158 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain K04M3_33440 d4a567c5f41c05a05896f9abd108d891 249 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 237 4.5E-33 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 K04M3_33440 d4a567c5f41c05a05896f9abd108d891 249 Gene3D G3DSA:3.20.20.60 1 249 2.3E-70 T 12-10-2018 K04M3_33440 d4a567c5f41c05a05896f9abd108d891 249 SUPERFAMILY SSF51621 5 245 1.71E-63 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_28780 2f24854a804ab6b403545cb928bd4d04 100 Pfam PF00436 Single-strand binding protein family 3 88 1.1E-6 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 K04M3_28780 2f24854a804ab6b403545cb928bd4d04 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 1.9E-30 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 K04M3_28780 2f24854a804ab6b403545cb928bd4d04 100 SUPERFAMILY SSF50249 1 99 1.17E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_28780 2f24854a804ab6b403545cb928bd4d04 100 Gene3D G3DSA:2.40.50.140 1 100 2.1E-27 T 12-10-2018 K04M3_28780 2f24854a804ab6b403545cb928bd4d04 100 PIRSF PIRSF003135 1 100 8.3E-45 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 K04M3_28780 2f24854a804ab6b403545cb928bd4d04 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.312 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 Gene3D G3DSA:3.30.70.1450 229 288 1.8E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.845 T 12-10-2018 IPR023017 Transport protein YbjL, putative K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 4.7E-38 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 2.2E-27 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.9E-36 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 4.8E-43 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_11890 ff621c27b52d53e9b83a28306250a1df 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_51850 0feb5a55c6cb7371a74d5401449761dc 361 Gene3D G3DSA:1.10.443.10 195 360 1.1E-11 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_51850 0feb5a55c6cb7371a74d5401449761dc 361 SUPERFAMILY SSF56349 118 353 3.53E-19 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_51850 0feb5a55c6cb7371a74d5401449761dc 361 Pfam PF00589 Phage integrase family 202 350 8.4E-6 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_21540 e9cde3c30ba8cb831458d8423776f58c 114 SUPERFAMILY SSF47226 2 113 4.84E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_21540 e9cde3c30ba8cb831458d8423776f58c 114 Pfam PF01627 Hpt domain 26 106 4.9E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_21540 e9cde3c30ba8cb831458d8423776f58c 114 Gene3D G3DSA:1.20.120.160 1 114 2.1E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_21940 4aa999f068e19e9db82264e537506ce3 438 Gene3D G3DSA:1.20.1250.20 37 228 2.6E-8 T 12-10-2018 K04M3_21940 4aa999f068e19e9db82264e537506ce3 438 SUPERFAMILY SSF103473 37 430 2.75E-28 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_21940 4aa999f068e19e9db82264e537506ce3 438 Gene3D G3DSA:1.20.1250.20 249 433 1.1E-10 T 12-10-2018 K04M3_39190 3250ac043eea50ee08664e72637c89b4 1018 SUPERFAMILY SSF52540 28 997 2.1E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39190 3250ac043eea50ee08664e72637c89b4 1018 Pfam PF13476 AAA domain 5 259 1.5E-26 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain K04M3_39190 3250ac043eea50ee08664e72637c89b4 1018 Gene3D G3DSA:3.40.50.300 651 1011 3.0E-24 T 12-10-2018 K04M3_39190 3250ac043eea50ee08664e72637c89b4 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 904 971 3.2E-12 T 12-10-2018 K04M3_39190 3250ac043eea50ee08664e72637c89b4 1018 Gene3D G3DSA:3.40.50.300 1 207 1.8E-42 T 12-10-2018 K04M3_02310 2dbd14fa40a5efa61b170644f69937d2 168 SUPERFAMILY SSF89562 2 158 2.09E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily K04M3_02310 2dbd14fa40a5efa61b170644f69937d2 168 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.6E-68 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 K04M3_02310 2dbd14fa40a5efa61b170644f69937d2 168 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.821 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 K04M3_02310 2dbd14fa40a5efa61b170644f69937d2 168 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 1.6E-82 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 K04M3_02310 2dbd14fa40a5efa61b170644f69937d2 168 Pfam PF03737 Aldolase/RraA 6 152 1.3E-39 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein K04M3_02310 2dbd14fa40a5efa61b170644f69937d2 168 Gene3D G3DSA:3.50.30.40 1 161 4.1E-61 T 12-10-2018 K04M3_15470 38ef3b41539128421e759b14d7735438 394 Pfam PF00534 Glycosyl transferases group 1 184 347 3.0E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_15470 38ef3b41539128421e759b14d7735438 394 SUPERFAMILY SSF53756 7 371 5.83E-68 T 12-10-2018 K04M3_15470 38ef3b41539128421e759b14d7735438 394 Gene3D G3DSA:3.40.50.2000 172 353 5.6E-61 T 12-10-2018 K04M3_15470 38ef3b41539128421e759b14d7735438 394 Pfam PF13439 Glycosyltransferase Family 4 18 174 1.9E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_15470 38ef3b41539128421e759b14d7735438 394 Gene3D G3DSA:3.40.50.2000 19 363 5.6E-61 T 12-10-2018 K04M3_08640 a0efc2cb6ac803eb666bb046a3fc42a3 284 SUPERFAMILY SSF53474 2 282 2.43E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_08640 a0efc2cb6ac803eb666bb046a3fc42a3 284 Pfam PF00561 alpha/beta hydrolase fold 27 134 1.8E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_08640 a0efc2cb6ac803eb666bb046a3fc42a3 284 Gene3D G3DSA:3.40.50.1820 1 277 1.2E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 SUPERFAMILY SSF63380 1 93 1.02E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 Gene3D G3DSA:2.40.30.20 1 89 4.3E-31 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 PIRSF PIRSF000498 1 203 5.2E-67 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 Pfam PF00677 Lumazine binding domain 3 87 1.8E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 Pfam PF00677 Lumazine binding domain 100 184 1.0E-19 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.0E-75 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 SUPERFAMILY SSF63380 93 198 5.61E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_15590 4e913446507a523e4c9cc84a4160b1fa 203 Gene3D G3DSA:2.40.30.20 94 190 1.1E-26 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 SUPERFAMILY SSF56655 3 331 1.69E-114 T 12-10-2018 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PIRSF PIRSF000904 2 337 2.6E-126 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 Gene3D G3DSA:3.30.540.10 4 198 1.0E-76 T 12-10-2018 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.3E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.3E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.3E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.3E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.3E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.3E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.6E-75 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 Gene3D G3DSA:3.40.190.80 200 336 1.2E-60 T 12-10-2018 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.127 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_03170 c37730e0b97c5cc24d790216342c464a 338 PIRSF PIRSF500210 1 336 3.8E-129 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 K04M3_44030 85214b148c3a6fa7537b90f91a28f122 414 SUPERFAMILY SSF53822 25 392 9.42E-54 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_44030 85214b148c3a6fa7537b90f91a28f122 414 Gene3D G3DSA:3.40.50.2300 152 383 1.8E-92 T 12-10-2018 K04M3_44030 85214b148c3a6fa7537b90f91a28f122 414 Pfam PF13458 Periplasmic binding protein 27 389 1.1E-66 T 12-10-2018 IPR028081 Leucine-binding protein domain K04M3_44030 85214b148c3a6fa7537b90f91a28f122 414 Gene3D G3DSA:3.40.50.2300 29 381 1.8E-92 T 12-10-2018 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 SUPERFAMILY SSF52440 2 110 4.03E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 Gene3D G3DSA:3.40.50.20 1 120 4.1E-53 T 12-10-2018 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 1.8E-190 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 Gene3D G3DSA:3.30.470.20 195 389 1.6E-60 T 12-10-2018 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 SUPERFAMILY SSF51246 317 389 1.3E-18 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.888 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 SUPERFAMILY SSF56059 111 313 1.71E-57 T 12-10-2018 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 Gene3D G3DSA:3.30.1490.20 121 194 2.4E-33 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_12530 dba0aee6e8acd17e4a3b00108ce4e7a1 391 Pfam PF02222 ATP-grasp domain 121 293 9.8E-58 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type K04M3_14750 a0b14e312a55b09ebb227125049430b2 365 SUPERFAMILY SSF48371 71 174 1.47E-5 T 12-10-2018 IPR016024 Armadillo-type fold K04M3_14750 a0b14e312a55b09ebb227125049430b2 365 Gene3D G3DSA:1.25.40.10 64 342 3.4E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_14750 a0b14e312a55b09ebb227125049430b2 365 SUPERFAMILY SSF48452 178 339 1.59E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 Gene3D G3DSA:3.40.50.150 2 308 2.0E-98 T 12-10-2018 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 SUPERFAMILY SSF53335 7 308 2.52E-63 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 473 1.2E-10 T 12-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.0E-100 T 12-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 Gene3D G3DSA:2.30.130.90 309 478 2.9E-68 T 12-10-2018 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 110 306 3.4E-49 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 1.3E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 1.3E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 1.3E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 1.3E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.3E-27 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 3.5E-29 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 K04M3_16420 cb3fa6f103a556b6bab66abf1de9816d 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 66.36 T 12-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 K04M3_23970 bb4b0e3518f3fa5c906dad05ed80aaad 185 Gene3D G3DSA:3.30.1360.40 31 105 2.4E-68 T 12-10-2018 K04M3_23970 bb4b0e3518f3fa5c906dad05ed80aaad 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.852 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 K04M3_23970 bb4b0e3518f3fa5c906dad05ed80aaad 185 SUPERFAMILY SSF55194 2 185 4.19E-72 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 K04M3_23970 bb4b0e3518f3fa5c906dad05ed80aaad 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.3E-77 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 K04M3_23970 bb4b0e3518f3fa5c906dad05ed80aaad 185 Pfam PF01765 Ribosome recycling factor 20 183 3.9E-63 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 K04M3_23970 bb4b0e3518f3fa5c906dad05ed80aaad 185 Gene3D G3DSA:1.10.132.20 11 182 2.4E-68 T 12-10-2018 K04M3_20570 5f163be3452df71a160e6ea55ee6a3d0 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 5.8E-27 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_20570 5f163be3452df71a160e6ea55ee6a3d0 427 Pfam PF02687 FtsX-like permease family 322 420 7.3E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 SUPERFAMILY SSF52172 8 192 1.15E-38 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Pfam PF00072 Response regulator receiver domain 9 118 1.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 SMART SM00382 168 308 2.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 SUPERFAMILY SSF52540 148 371 1.99E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 SMART SM00448 7 118 4.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Gene3D G3DSA:1.10.8.60 316 377 2.0E-13 T 12-10-2018 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 2.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 SUPERFAMILY SSF46689 391 443 7.62E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Gene3D G3DSA:3.40.50.300 139 315 1.3E-57 T 12-10-2018 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Gene3D G3DSA:3.40.50.2300 5 138 3.8E-32 T 12-10-2018 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Pfam PF00158 Sigma-54 interaction domain 148 311 7.8E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_48000 fec7b598c482c19f9c62954ec3011d61 449 Gene3D G3DSA:1.10.10.60 381 446 7.8E-7 T 12-10-2018 K04M3_18700 673c3bc6dbecb60382c957fa00fd8614 191 Gene3D G3DSA:1.10.3480.10 2 189 4.7E-39 T 12-10-2018 K04M3_18700 673c3bc6dbecb60382c957fa00fd8614 191 Pfam PF02613 Nitrate reductase delta subunit 44 145 2.2E-19 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone K04M3_18700 673c3bc6dbecb60382c957fa00fd8614 191 PIRSF PIRSF004690 1 189 2.2E-39 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type K04M3_18700 673c3bc6dbecb60382c957fa00fd8614 191 SUPERFAMILY SSF89155 4 188 9.03E-38 T 12-10-2018 IPR036411 TorD-like superfamily K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Pfam PF00042 Globin 7 103 1.3E-14 T 12-10-2018 IPR000971 Globin GO:0020037 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 SUPERFAMILY SSF63380 148 253 7.85E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 2.1E-14 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 SUPERFAMILY SSF52343 256 393 4.71E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 6.8E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 6.8E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 6.8E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 6.8E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Gene3D G3DSA:3.40.50.80 256 394 3.2E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Gene3D G3DSA:1.10.490.10 1 142 8.9E-51 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Gene3D G3DSA:2.40.30.10 149 254 1.9E-33 T 12-10-2018 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 3.5E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.752 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 K04M3_29440 2eda6bf62e0f23695fa66973b44fd9db 394 SUPERFAMILY SSF46458 1 142 8.65E-37 T 12-10-2018 IPR009050 Globin-like superfamily K04M3_37570 53d3ceff90ba30ea04fe8536028ff020 216 PIRSF PIRSF006320 1 216 1.9E-104 T 12-10-2018 IPR026041 Glyoxalase ElbB K04M3_37570 53d3ceff90ba30ea04fe8536028ff020 216 SUPERFAMILY SSF52317 1 215 3.48E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_37570 53d3ceff90ba30ea04fe8536028ff020 216 Gene3D G3DSA:3.40.50.880 1 216 6.0E-87 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_11460 1a0f6dc680b87e7bf75e40054a84b287 77 Pfam PF06667 Phage shock protein B 3 74 6.2E-32 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 K04M3_11460 1a0f6dc680b87e7bf75e40054a84b287 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 7.9E-36 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 K04M3_15430 780dc3e07b2402172dd48396635952dc 374 SUPERFAMILY SSF53756 76 372 1.39E-20 T 12-10-2018 K04M3_15430 780dc3e07b2402172dd48396635952dc 374 Pfam PF13692 Glycosyl transferases group 1 216 345 1.1E-6 T 12-10-2018 K04M3_15430 780dc3e07b2402172dd48396635952dc 374 Gene3D G3DSA:3.40.50.2000 202 353 1.5E-30 T 12-10-2018 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 SMART SM00304 178 233 9.5E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 456 8.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Pfam PF00672 HAMP domain 178 229 1.7E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Gene3D G3DSA:1.10.287.130 182 299 2.4E-25 T 12-10-2018 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Gene3D G3DSA:3.30.565.10 312 457 5.6E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 5.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 5.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 2.1E-29 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 SUPERFAMILY SSF47384 217 298 1.69E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Gene3D G3DSA:3.30.450.170 39 150 1.9E-8 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 SMART SM00387 343 457 1.9E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 SUPERFAMILY SSF55874 287 456 2.62E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 SUPERFAMILY SSF158472 178 230 2.35E-6 T 12-10-2018 K04M3_48330 a87988ddeeedc05aa08e3005f6812758 457 SMART SM00388 234 298 4.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_07000 dd942191327e767f34c9dc65d31071e7 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.2E-39 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS K04M3_07000 dd942191327e767f34c9dc65d31071e7 105 SUPERFAMILY SSF81301 5 105 1.49E-38 T 12-10-2018 K04M3_07000 dd942191327e767f34c9dc65d31071e7 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.582 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS K04M3_07000 dd942191327e767f34c9dc65d31071e7 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.3E-28 T 12-10-2018 K04M3_07000 dd942191327e767f34c9dc65d31071e7 105 Gene3D G3DSA:3.30.460.10 3 105 9.3E-38 T 12-10-2018 K04M3_03580 071f755df837abbc81d941a21ce13641 226 SUPERFAMILY SSF48008 74 214 3.4E-5 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_03580 071f755df837abbc81d941a21ce13641 226 SUPERFAMILY SSF46785 2 76 2.15E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_03580 071f755df837abbc81d941a21ce13641 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 7.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_03580 071f755df837abbc81d941a21ce13641 226 Gene3D G3DSA:1.10.10.10 1 69 1.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_03580 071f755df837abbc81d941a21ce13641 226 Gene3D G3DSA:1.20.120.530 71 217 1.5E-5 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal K04M3_03580 071f755df837abbc81d941a21ce13641 226 SMART SM00345 10 68 1.9E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_47820 6af84126d2bb7efc0aac1b041b558d32 362 Pfam PF12060 Domain of unknown function (DUF3541) 32 253 2.4E-109 T 12-10-2018 IPR021928 Protein of unknown function DUF3541 K04M3_12520 dfc4da580ba9b44323b5f0ce28fb225d 242 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 31 240 7.2E-79 T 12-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 K04M3_12520 dfc4da580ba9b44323b5f0ce28fb225d 242 SUPERFAMILY SSF53335 24 240 3.64E-56 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_12520 dfc4da580ba9b44323b5f0ce28fb225d 242 PIRSF PIRSF023956 27 242 2.8E-73 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 K04M3_12520 dfc4da580ba9b44323b5f0ce28fb225d 242 Gene3D G3DSA:3.40.50.150 19 242 3.6E-63 T 12-10-2018 K04M3_12520 dfc4da580ba9b44323b5f0ce28fb225d 242 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 28 241 35.897 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 K04M3_12520 dfc4da580ba9b44323b5f0ce28fb225d 242 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 29 240 3.3E-74 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 Gene3D G3DSA:2.40.100.10 1 163 1.0E-62 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 4.6E-46 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 PIRSF PIRSF001467 1 164 6.9E-26 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 SUPERFAMILY SSF50891 2 162 3.94E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_49410 3316ca718b5ede16989ba6d3d1d9a613 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_23070 ebd97d9d987d4d7055e2f51582aaac85 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 7.3E-37 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 K04M3_23070 ebd97d9d987d4d7055e2f51582aaac85 232 Gene3D G3DSA:3.30.1380.10 4 190 3.0E-34 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_23070 ebd97d9d987d4d7055e2f51582aaac85 232 SUPERFAMILY SSF55166 20 175 6.8E-21 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 SUPERFAMILY SSF50630 358 482 3.71E-11 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 SUPERFAMILY SSF50630 219 340 5.51E-19 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 Gene3D G3DSA:2.40.70.10 109 204 1.1E-10 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 Gene3D G3DSA:2.40.70.10 489 611 1.1E-31 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 Gene3D G3DSA:2.40.70.10 216 333 3.3E-6 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 SUPERFAMILY SSF50630 491 617 5.3E-32 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 SUPERFAMILY SSF50630 42 211 1.15E-22 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 Pfam PF05618 Putative ATP-dependant zinc protease 139 212 2.2E-5 T 12-10-2018 K04M3_01370 fd535a2bfd0c59593032a4a92e50cf8e 626 Pfam PF05618 Putative ATP-dependant zinc protease 499 619 1.1E-24 T 12-10-2018 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 Gene3D G3DSA:3.30.450.20 53 269 1.0E-28 T 12-10-2018 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 Gene3D G3DSA:1.10.287.950 296 628 6.8E-75 T 12-10-2018 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 SMART SM00283 365 626 3.4E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 SUPERFAMILY SSF58104 318 627 4.05E-77 T 12-10-2018 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 Pfam PF02743 Cache domain 42 257 1.0E-23 T 12-10-2018 IPR033479 Double Cache domain 1 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 SMART SM00304 296 350 1.6E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 Gene3D G3DSA:3.30.450.20 66 171 1.0E-28 T 12-10-2018 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 Pfam PF00672 HAMP domain 300 347 8.8E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_33280 253144c798b6a1c60cec1186ed858890 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 594 2.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_09000 095ed6c7c48b5b4a99f204047999a187 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 2.8E-123 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 K04M3_09000 095ed6c7c48b5b4a99f204047999a187 455 Pfam PF02386 Cation transport protein 52 438 2.0E-53 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 Gene3D G3DSA:2.160.10.10 287 403 2.0E-32 T 12-10-2018 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 49.636 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 Pfam PF00483 Nucleotidyl transferase 6 272 2.3E-69 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 SUPERFAMILY SSF51161 312 395 9.27E-17 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 SUPERFAMILY SSF53448 5 357 2.3E-78 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 Gene3D G3DSA:3.90.550.10 1 286 9.2E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_42120 4c870159cee7675bc011fe2a67ec4dab 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 3.2E-154 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 K04M3_18610 a7874f1b9b1cdfd0fdccfe14474b7435 324 SUPERFAMILY SSF56235 2 305 7.64E-99 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_18610 a7874f1b9b1cdfd0fdccfe14474b7435 324 Gene3D G3DSA:3.60.60.10 1 318 4.3E-120 T 12-10-2018 K04M3_18610 a7874f1b9b1cdfd0fdccfe14474b7435 324 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 294 2.1E-52 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 SUPERFAMILY SSF56925 33 202 6.54E-28 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 Gene3D G3DSA:2.40.160.20 23 217 1.7E-37 T 12-10-2018 K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 PRINTS PR01021 OMPA domain signature 279 295 6.6E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 PRINTS PR01021 OMPA domain signature 264 279 6.6E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 Pfam PF00691 OmpA family 235 328 2.3E-20 T 12-10-2018 IPR006665 OmpA-like domain K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 279 296 4.8E-11 T 12-10-2018 K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 297 316 4.8E-11 T 12-10-2018 K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 317 337 4.8E-11 T 12-10-2018 K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 SUPERFAMILY SSF103088 225 333 2.62E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 Gene3D G3DSA:3.30.1330.60 228 340 9.8E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_18950 cb2f77687688f021dc3a022f77095c37 341 Pfam PF01389 OmpA-like transmembrane domain 34 202 3.9E-23 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 K04M3_02480 2cdd4cc1627175f393e7d5731515e5fc 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 1.0E-19 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 K04M3_02480 2cdd4cc1627175f393e7d5731515e5fc 98 PIRSF PIRSF002736 1 97 4.8E-41 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 K04M3_02480 2cdd4cc1627175f393e7d5731515e5fc 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 5.4E-37 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 K04M3_02480 2cdd4cc1627175f393e7d5731515e5fc 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 5.0E-31 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein K04M3_02480 2cdd4cc1627175f393e7d5731515e5fc 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.796 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 K04M3_34590 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 4.0E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_34590 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 4.0E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_34590 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 4.0E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_34590 ea37525bcdb16ab5524ff356904981c5 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 12 117 4.4E-14 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_34590 ea37525bcdb16ab5524ff356904981c5 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 15.269 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_34590 ea37525bcdb16ab5524ff356904981c5 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 8.8E-24 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_43970 0e56e42c768fff9b0f17e36af9ac84be 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 260 2.9E-98 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 K04M3_43970 0e56e42c768fff9b0f17e36af9ac84be 261 Gene3D G3DSA:3.30.1330.80 106 228 1.3E-80 T 12-10-2018 K04M3_43970 0e56e42c768fff9b0f17e36af9ac84be 261 PIRSF PIRSF001332 15 261 6.4E-95 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 K04M3_43970 0e56e42c768fff9b0f17e36af9ac84be 261 Gene3D G3DSA:3.30.1330.80 31 247 1.3E-80 T 12-10-2018 K04M3_43970 0e56e42c768fff9b0f17e36af9ac84be 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 2.9E-84 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 K04M3_43970 0e56e42c768fff9b0f17e36af9ac84be 261 SUPERFAMILY SSF117856 30 260 1.83E-85 T 12-10-2018 K04M3_35270 aa0503dabd3c0a93a1bee87a86890752 750 SUPERFAMILY SSF49785 604 708 1.79E-17 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_35270 aa0503dabd3c0a93a1bee87a86890752 750 Pfam PF01483 Proprotein convertase P-domain 621 705 1.5E-19 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 K04M3_35270 aa0503dabd3c0a93a1bee87a86890752 750 Gene3D G3DSA:2.60.120.260 586 724 1.6E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_35270 aa0503dabd3c0a93a1bee87a86890752 750 SUPERFAMILY SSF55486 174 486 2.93E-41 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 SUPERFAMILY SSF56014 634 809 3.4E-47 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.8E-10 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-8 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.8E-8 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.8E-8 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.8E-8 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Gene3D G3DSA:3.30.413.10 632 796 7.7E-32 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.8E-15 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.8E-15 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.8E-15 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.8E-15 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-15 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 SUPERFAMILY SSF51905 3 184 7.5E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 PIRSF PIRSF037149 1 836 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 2.4E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Gene3D G3DSA:3.50.50.60 110 246 9.4E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 SUPERFAMILY SSF55124 503 630 9.01E-31 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Gene3D G3DSA:3.50.50.60 7 283 9.4E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 12-10-2018 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 SUPERFAMILY SSF51905 144 310 6.91E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 K04M3_40030 5f411051eeb9d170db7635003b221bbe 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 769 4.5E-15 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 K04M3_06650 d6621b9daa50248c66bb4db9993cea6d 294 Gene3D G3DSA:1.10.600.10 1 294 5.3E-113 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily K04M3_06650 d6621b9daa50248c66bb4db9993cea6d 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site K04M3_06650 d6621b9daa50248c66bb4db9993cea6d 294 SUPERFAMILY SSF48576 3 285 3.52E-86 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily K04M3_06650 d6621b9daa50248c66bb4db9993cea6d 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site K04M3_06650 d6621b9daa50248c66bb4db9993cea6d 294 Pfam PF00348 Polyprenyl synthetase 29 270 3.7E-57 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 K04M3_29150 827dc08417e46e3e9bd2815d152b1ce5 118 SUPERFAMILY SSF75169 3 118 2.09E-35 T 12-10-2018 IPR027396 DsrEFH-like K04M3_29150 827dc08417e46e3e9bd2815d152b1ce5 118 Gene3D G3DSA:3.40.1260.10 1 118 3.4E-38 T 12-10-2018 IPR027396 DsrEFH-like K04M3_29150 827dc08417e46e3e9bd2815d152b1ce5 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.1E-45 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF K04M3_29150 827dc08417e46e3e9bd2815d152b1ce5 118 Pfam PF02635 DsrE/DsrF-like family 4 118 5.7E-25 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein K04M3_02090 97bb679b2b50909ba786bea249ccc1d0 364 Gene3D G3DSA:3.40.50.2000 164 348 8.2E-74 T 12-10-2018 K04M3_02090 97bb679b2b50909ba786bea249ccc1d0 364 Gene3D G3DSA:3.40.50.2000 22 361 8.2E-74 T 12-10-2018 K04M3_02090 97bb679b2b50909ba786bea249ccc1d0 364 SUPERFAMILY SSF53756 7 364 4.19E-78 T 12-10-2018 K04M3_02090 97bb679b2b50909ba786bea249ccc1d0 364 Pfam PF00534 Glycosyl transferases group 1 176 341 6.8E-34 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_02090 97bb679b2b50909ba786bea249ccc1d0 364 Pfam PF13439 Glycosyltransferase Family 4 12 167 2.0E-17 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 Gene3D G3DSA:1.20.81.30 55 172 7.7E-38 T 12-10-2018 K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 8.1E-37 T 12-10-2018 IPR003004 GspF/PilC family K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 8.1E-37 T 12-10-2018 IPR003004 GspF/PilC family K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 8.1E-37 T 12-10-2018 IPR003004 GspF/PilC family K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 8.1E-37 T 12-10-2018 IPR003004 GspF/PilC family K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-35 T 12-10-2018 IPR018076 Type II secretion system F domain K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 9.8E-25 T 12-10-2018 IPR018076 Type II secretion system F domain K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 Gene3D G3DSA:1.20.81.30 257 368 7.1E-26 T 12-10-2018 K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 K04M3_01210 10afa70ff4224ac25b2f1c58102b5bd6 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 6.3E-156 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 Pfam PF01235 Sodium:alanine symporter family 48 453 2.1E-162 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.6E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.6E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.6E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.6E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.6E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.6E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_04720 bcb8e0211123d89027aa52b786aa7d1a 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 4.3E-163 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 K04M3_26610 447ba7aa633d0211b1e6b073db0e7a30 395 SUPERFAMILY SSF53633 6 242 1.44E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_26610 447ba7aa633d0211b1e6b073db0e7a30 395 Pfam PF00696 Amino acid kinase family 5 231 3.3E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_26610 447ba7aa633d0211b1e6b073db0e7a30 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_26610 447ba7aa633d0211b1e6b073db0e7a30 395 Gene3D G3DSA:3.40.1160.10 4 258 7.8E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_26610 447ba7aa633d0211b1e6b073db0e7a30 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 1.1E-75 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 SUPERFAMILY SSF56601 20 280 1.15E-67 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 Pfam PF13354 Beta-lactamase enzyme family 47 252 4.6E-34 T 12-10-2018 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.4E-56 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 12-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 K04M3_36620 3ce32ca67dfb7ef14dab1866e931240b 283 Gene3D G3DSA:3.40.710.10 20 281 2.3E-64 T 12-10-2018 K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 3.1E-23 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Gene3D G3DSA:3.40.1390.10 1 99 1.6E-31 T 12-10-2018 K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 2.3E-9 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.2E-115 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Gene3D G3DSA:2.160.10.10 100 308 1.4E-62 T 12-10-2018 K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.526 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 K04M3_23900 a8bb8e5c8534d5cf70917f77889b3628 343 SUPERFAMILY SSF51161 32 316 1.07E-82 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_46460 ae2561afcbda8fccaab2aed41e9ff36e 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 5.8E-52 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like K04M3_46460 ae2561afcbda8fccaab2aed41e9ff36e 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 1.7E-29 T 12-10-2018 K04M3_46460 ae2561afcbda8fccaab2aed41e9ff36e 219 Gene3D G3DSA:1.20.1440.100 17 90 6.6E-58 T 12-10-2018 K04M3_46460 ae2561afcbda8fccaab2aed41e9ff36e 219 SUPERFAMILY SSF56784 1 210 1.58E-31 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_46460 ae2561afcbda8fccaab2aed41e9ff36e 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 2.0E-28 T 12-10-2018 K04M3_46460 ae2561afcbda8fccaab2aed41e9ff36e 219 Gene3D G3DSA:3.40.50.1000 6 216 6.6E-58 T 12-10-2018 IPR023214 HAD superfamily K04M3_11070 6ea948f47a621dd3774ad3d8c75a114e 434 SUPERFAMILY SSF53613 31 417 4.64E-45 T 12-10-2018 IPR029056 Ribokinase-like K04M3_11070 6ea948f47a621dd3774ad3d8c75a114e 434 Pfam PF00294 pfkB family carbohydrate kinase 76 292 8.6E-12 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_52670 93da09690306b6329d144ddc5951a328 856 Gene3D G3DSA:1.10.10.160 125 247 9.0E-60 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily K04M3_52670 93da09690306b6329d144ddc5951a328 856 Gene3D G3DSA:1.10.486.10 447 575 6.7E-31 T 12-10-2018 K04M3_52670 93da09690306b6329d144ddc5951a328 856 Gene3D G3DSA:3.40.50.300 20 328 9.0E-60 T 12-10-2018 K04M3_52670 93da09690306b6329d144ddc5951a328 856 SUPERFAMILY SSF52540 19 759 1.0E-104 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_52670 93da09690306b6329d144ddc5951a328 856 Pfam PF13361 UvrD-like helicase C-terminal domain 338 741 1.5E-43 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 K04M3_52670 93da09690306b6329d144ddc5951a328 856 Pfam PF00580 UvrD/REP helicase N-terminal domain 20 328 1.3E-52 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 K04M3_52670 93da09690306b6329d144ddc5951a328 856 Gene3D G3DSA:3.40.50.300 635 769 1.6E-19 T 12-10-2018 K04M3_52670 93da09690306b6329d144ddc5951a328 856 Gene3D G3DSA:3.40.50.300 342 446 6.7E-31 T 12-10-2018 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 PIRSF PIRSF002096 1 135 4.8E-44 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 SUPERFAMILY SSF81273 5 58 1.06E-11 T 12-10-2018 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 SUPERFAMILY SSF81273 94 136 2.04E-12 T 12-10-2018 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 Gene3D G3DSA:4.10.430.10 92 136 7.4E-25 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 Pfam PF00816 H-NS histone family 39 129 9.5E-20 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 Gene3D G3DSA:1.10.287.1050 1 83 1.7E-19 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 K04M3_51540 496eb6f74fb4c1f9c76df00cbbe72311 137 SMART SM00528 88 135 7.1E-24 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 K04M3_44440 bc3acadf7200aabe144dcc4be258c1c8 168 PIRSF PIRSF028301 1 168 2.5E-63 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 K04M3_44440 bc3acadf7200aabe144dcc4be258c1c8 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 1.1E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 K04M3_44440 bc3acadf7200aabe144dcc4be258c1c8 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 8.4E-59 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 K04M3_11650 c441a2b083a9a22f3ec398e7f0b355c9 569 SUPERFAMILY SSF161098 301 540 2.71E-25 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_11650 c441a2b083a9a22f3ec398e7f0b355c9 569 SUPERFAMILY SSF161098 5 276 6.67E-24 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_11650 c441a2b083a9a22f3ec398e7f0b355c9 569 Gene3D G3DSA:1.10.3720.10 298 547 5.2E-20 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_11650 c441a2b083a9a22f3ec398e7f0b355c9 569 Gene3D G3DSA:1.10.3720.10 3 279 1.2E-18 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_48500 b54ef38284ba172689ef71032a18dd48 447 Gene3D G3DSA:3.30.2290.10 4 213 8.0E-34 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal K04M3_48500 b54ef38284ba172689ef71032a18dd48 447 SUPERFAMILY SSF111283 8 445 8.89E-94 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 K04M3_48500 b54ef38284ba172689ef71032a18dd48 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 4.3E-44 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 K04M3_21120 349c96da3bd9969eaba8b286bddae585 353 PIRSF PIRSF002465 14 351 9.2E-125 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 K04M3_21120 349c96da3bd9969eaba8b286bddae585 353 Gene3D G3DSA:3.40.718.10 14 352 2.1E-121 T 12-10-2018 K04M3_21120 349c96da3bd9969eaba8b286bddae585 353 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 18 347 8.1E-107 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 K04M3_21120 349c96da3bd9969eaba8b286bddae585 353 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 352 135.205 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 K04M3_21120 349c96da3bd9969eaba8b286bddae585 353 SUPERFAMILY SSF53659 16 348 2.22E-103 T 12-10-2018 K04M3_21120 349c96da3bd9969eaba8b286bddae585 353 Pfam PF02504 Fatty acid synthesis protein 17 339 1.1E-101 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Gene3D G3DSA:3.40.1190.10 111 325 5.3E-85 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.5E-28 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 SUPERFAMILY SSF51984 23 109 3.4E-29 T 12-10-2018 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Pfam PF08245 Mur ligase middle domain 127 307 4.8E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 SUPERFAMILY SSF53244 326 473 1.12E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 3.7E-188 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Gene3D G3DSA:3.40.50.720 23 110 1.1E-33 T 12-10-2018 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Gene3D G3DSA:3.90.190.20 326 483 5.3E-50 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 SUPERFAMILY SSF53623 108 322 1.01E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 44.013 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_04310 cc9e04b41fb31b9b9bdf00a76b1ed4c5 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.5E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 3.8E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 SUPERFAMILY SSF51735 122 243 2.84E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 SMART SM00829 12 312 8.9E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 Gene3D G3DSA:3.40.50.720 133 263 2.0E-90 T 12-10-2018 K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 SUPERFAMILY SSF50129 4 154 1.42E-35 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 1.6E-19 T 12-10-2018 K04M3_26460 1ee017a9efe55e7635ddb82fea8abbd3 316 Gene3D G3DSA:3.90.180.10 10 310 2.0E-90 T 12-10-2018 K04M3_44400 9d21ec4bdbd0c18b7a95a0987f6e8e26 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 9 317 3.1E-96 T 12-10-2018 IPR010732 Type VI secretion, TssG-like K04M3_44400 9d21ec4bdbd0c18b7a95a0987f6e8e26 332 Pfam PF06996 Type VI secretion, TssG 10 317 1.6E-84 T 12-10-2018 IPR010732 Type VI secretion, TssG-like K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 Gene3D G3DSA:3.40.190.10 93 303 2.6E-98 T 12-10-2018 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 Gene3D G3DSA:1.10.10.10 1 86 5.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 Gene3D G3DSA:3.40.190.10 167 267 2.6E-98 T 12-10-2018 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 Pfam PF03466 LysR substrate binding domain 91 292 5.2E-40 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 SUPERFAMILY SSF53850 91 322 1.09E-42 T 12-10-2018 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_10770 af95e94fcf53534ffc08052e3b50265a 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 Gene3D G3DSA:1.10.10.10 154 228 4.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 SUPERFAMILY SSF46785 149 227 8.4E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 SMART SM00100 13 131 1.6E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 SUPERFAMILY SSF51206 1 142 6.68E-26 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 Pfam PF13545 Crp-like helix-turn-helix domain 151 225 2.5E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 6.1E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 6.1E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 SMART SM00419 172 218 8.0E-4 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 3.1E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_20240 82b3d5b22db05626dfb1c4770f30d158 231 Gene3D G3DSA:2.60.120.10 3 153 1.7E-24 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_01760 cb4435098e211ce7f776d84aba26ad92 255 SUPERFAMILY SSF53448 3 143 4.78E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01760 cb4435098e211ce7f776d84aba26ad92 255 Pfam PF00535 Glycosyl transferase family 2 8 117 1.8E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_01760 cb4435098e211ce7f776d84aba26ad92 255 Gene3D G3DSA:3.90.550.10 2 125 3.0E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_30850 548539fe1f09ae7f02fd0d953cda7512 230 Gene3D G3DSA:3.40.50.620 2 145 2.0E-16 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_30850 548539fe1f09ae7f02fd0d953cda7512 230 SUPERFAMILY SSF52402 4 222 1.21E-55 T 12-10-2018 K04M3_30850 548539fe1f09ae7f02fd0d953cda7512 230 Gene3D G3DSA:3.90.1490.10 146 227 2.9E-8 T 12-10-2018 K04M3_30850 548539fe1f09ae7f02fd0d953cda7512 230 Pfam PF01902 Diphthamide synthase 6 214 6.5E-22 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 K04M3_12560 810dc990bdc553a92c4fa1726332a67f 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.791 T 12-10-2018 IPR022957 Uncharacterised protein family UPF0299 K04M3_12560 810dc990bdc553a92c4fa1726332a67f 124 Pfam PF03788 LrgA family 25 115 1.1E-24 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 SUPERFAMILY SSF52283 4 130 2.76E-23 T 12-10-2018 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 285 1.5E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Gene3D G3DSA:3.40.50.720 1 279 3.5E-112 T 12-10-2018 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 6.0E-28 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Gene3D G3DSA:3.40.50.720 93 258 3.5E-112 T 12-10-2018 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 8.2E-34 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.085 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 SUPERFAMILY SSF51735 93 258 1.69E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_22320 2dcd47d12723e23c5e838b1c5032ed30 377 Gene3D G3DSA:3.30.1370.170 294 377 1.7E-31 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 K04M3_06600 5cd535316f3bce72dae62d119b28153f 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.4E-54 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06600 5cd535316f3bce72dae62d119b28153f 156 Gene3D G3DSA:3.40.50.960 1 156 1.7E-63 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06600 5cd535316f3bce72dae62d119b28153f 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.055 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06600 5cd535316f3bce72dae62d119b28153f 156 SUPERFAMILY SSF52121 4 154 1.57E-59 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06600 5cd535316f3bce72dae62d119b28153f 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.6E-56 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 6.1E-169 T 12-10-2018 K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 3.4E-33 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 Gene3D G3DSA:1.10.3810.10 48 242 7.5E-79 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 Gene3D G3DSA:3.40.710.10 243 329 1.8E-8 T 12-10-2018 K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 Pfam PF00912 Transglycosylase 55 229 1.9E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF53955 43 256 2.7E-78 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 SUPERFAMILY SSF56601 211 835 2.82E-111 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_28900 51fe1fc646303347300c8ef7055fc3c5 853 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 610 5.9E-22 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 K04M3_39940 674e4e7ecc3e595ff24a40c51218408d 336 SMART SM00880 51 314 2.6E-26 T 12-10-2018 IPR007899 CHAD domain K04M3_39940 674e4e7ecc3e595ff24a40c51218408d 336 Pfam PF05235 CHAD domain 57 279 1.5E-45 T 12-10-2018 IPR007899 CHAD domain K04M3_39940 674e4e7ecc3e595ff24a40c51218408d 336 Gene3D G3DSA:1.40.20.10 31 335 1.1E-61 T 12-10-2018 IPR038186 CHAD domain superfamily K04M3_13120 d91c4eb04347174b1264b55886ea6282 337 Pfam PF01032 FecCD transport family 31 332 1.8E-79 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_13120 d91c4eb04347174b1264b55886ea6282 337 SUPERFAMILY SSF81345 13 332 1.44E-77 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_13120 d91c4eb04347174b1264b55886ea6282 337 Gene3D G3DSA:1.10.3470.10 11 334 1.3E-92 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_13120 d91c4eb04347174b1264b55886ea6282 337 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 9 335 30.429 T 12-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-52 T 12-10-2018 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 SUPERFAMILY SSF55904 568 706 2.09E-42 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 SUPERFAMILY SSF53383 130 562 2.04E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 PIRSF PIRSF009393 1 711 2.4E-288 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Gene3D G3DSA:3.90.1150.10 425 594 9.3E-71 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Gene3D G3DSA:3.40.640.10 130 424 2.6E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.4E-189 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 K04M3_30370 ac2219512cf2578224de04b75e60ea95 711 Gene3D G3DSA:3.90.100.10 595 711 4.5E-45 T 12-10-2018 K04M3_09620 1aa06ee59a4943b6e1d14daac44e02e6 293 Gene3D G3DSA:3.90.1200.10 103 286 2.7E-13 T 12-10-2018 K04M3_09620 1aa06ee59a4943b6e1d14daac44e02e6 293 Pfam PF01636 Phosphotransferase enzyme family 30 235 1.1E-11 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase K04M3_09620 1aa06ee59a4943b6e1d14daac44e02e6 293 SUPERFAMILY SSF56112 24 270 6.71E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_09620 1aa06ee59a4943b6e1d14daac44e02e6 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 3.0E-95 T 12-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 K04M3_47360 b301ecd39a806c5532e02c646509aa68 308 Pfam PF04393 Protein of unknown function (DUF535) 27 295 9.7E-81 T 12-10-2018 IPR007488 Protein of unknown function DUF535 K04M3_03080 ecc89ed482fcdaeecc7a5396c41b8e47 99 Pfam PF10795 Protein of unknown function (DUF2607) 3 97 8.2E-27 T 12-10-2018 IPR019731 Protein of unknown function DUF2607 K04M3_29830 68b853de17274dee511c4be86322b31d 124 Pfam PF04892 VanZ like family 33 109 3.8E-9 T 12-10-2018 IPR006976 VanZ-like K04M3_15270 6e70420b43a2728320d64210a8900249 185 Gene3D G3DSA:1.10.3680.10 41 178 7.7E-20 T 12-10-2018 IPR029024 TerB-like K04M3_15270 6e70420b43a2728320d64210a8900249 185 SUPERFAMILY SSF158682 39 183 1.22E-28 T 12-10-2018 IPR029024 TerB-like K04M3_15270 6e70420b43a2728320d64210a8900249 185 Pfam PF05099 Tellurite resistance protein TerB 58 182 3.4E-38 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal K04M3_23460 054080152b0f3f710bde861a0d9dca24 352 SUPERFAMILY SSF117892 133 249 6.02E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_23460 054080152b0f3f710bde861a0d9dca24 352 SMART SM00244 60 242 3.8E-25 T 12-10-2018 IPR001107 Band 7 domain K04M3_23460 054080152b0f3f710bde861a0d9dca24 352 Pfam PF01145 SPFH domain / Band 7 family 64 257 6.3E-25 T 12-10-2018 IPR001107 Band 7 domain K04M3_23460 054080152b0f3f710bde861a0d9dca24 352 TIGRFAM TIGR01933 hflK: HflK protein 62 344 1.3E-79 T 12-10-2018 IPR010201 HflK GO:0016021 K04M3_23460 054080152b0f3f710bde861a0d9dca24 352 Gene3D G3DSA:3.30.479.30 127 232 1.0E-18 T 12-10-2018 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.855 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 6.6E-74 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:3.40.50.300 274 634 5.7E-124 T 12-10-2018 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:1.10.486.10 377 546 5.7E-124 T 12-10-2018 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:1.10.10.160 108 181 1.3E-99 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Gene3D G3DSA:3.40.50.300 4 266 1.3E-99 T 12-10-2018 K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 SUPERFAMILY SSF52540 1 640 5.32E-163 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00350 36649d67b9e81c7627ead3d0198f3d41 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.0E-77 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 K04M3_47230 73e6575da6976d1d6840907e84819a5f 248 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 93 121 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 K04M3_47230 73e6575da6976d1d6840907e84819a5f 248 Pfam PF01464 Transglycosylase SLT domain 79 187 1.3E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_47230 73e6575da6976d1d6840907e84819a5f 248 Gene3D G3DSA:1.10.530.10 71 217 2.8E-34 T 12-10-2018 K04M3_47230 73e6575da6976d1d6840907e84819a5f 248 SUPERFAMILY SSF53955 28 207 2.08E-38 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 SMART SM00228 115 186 1.4 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 SMART SM00228 212 281 2.3E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 9.5E-137 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 Gene3D G3DSA:2.30.42.10 222 311 1.3E-20 T 12-10-2018 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 Pfam PF02163 Peptidase family M50 11 440 2.4E-87 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 SUPERFAMILY SSF50156 196 293 3.29E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 Gene3D G3DSA:2.30.42.10 126 221 1.1E-31 T 12-10-2018 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 SUPERFAMILY SSF50156 89 183 2.76E-10 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_23930 d48af4e55919d34212d08bcc68fb6d00 452 Pfam PF13180 PDZ domain 226 288 3.9E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_20660 09f5e087b77456abd66f50ef667197e9 703 Pfam PF13899 Thioredoxin-like 587 673 8.5E-11 T 12-10-2018 K04M3_20660 09f5e087b77456abd66f50ef667197e9 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_20660 09f5e087b77456abd66f50ef667197e9 703 SUPERFAMILY SSF52833 580 673 5.03E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_20660 09f5e087b77456abd66f50ef667197e9 703 Gene3D G3DSA:3.40.30.10 584 689 2.7E-8 T 12-10-2018 K04M3_20660 09f5e087b77456abd66f50ef667197e9 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 515 1.9E-15 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 K04M3_20660 09f5e087b77456abd66f50ef667197e9 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 6.8E-17 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain K04M3_47170 0334f1e9ff2346aa1a473394f487bf94 227 Gene3D G3DSA:2.30.30.910 100 222 1.9E-16 T 12-10-2018 K04M3_47170 0334f1e9ff2346aa1a473394f487bf94 227 Gene3D G3DSA:2.60.40.4070 111 190 1.9E-16 T 12-10-2018 K04M3_47170 0334f1e9ff2346aa1a473394f487bf94 227 Pfam PF13861 FlgD Tudor-like domain 94 223 5.3E-11 T 12-10-2018 IPR025963 FlgD Tudor-like domain K04M3_47170 0334f1e9ff2346aa1a473394f487bf94 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 85 2.3E-17 T 12-10-2018 IPR005648 Flagellar hook capping protein K04M3_47170 0334f1e9ff2346aa1a473394f487bf94 227 Pfam PF13860 FlgD Ig-like domain 114 182 2.9E-8 T 12-10-2018 IPR025965 FlgD Ig-like domain K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 Gene3D G3DSA:3.30.1700.10 129 305 5.4E-71 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.6E-109 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 2.0E-142 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 SUPERFAMILY SSF54211 134 278 4.78E-53 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 Gene3D G3DSA:3.30.230.20 1 128 7.7E-52 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.964 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 K04M3_04350 b1f356f53c3efea317d5d5e8fc9557e5 305 SUPERFAMILY SSF54211 3 126 1.21E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 SUPERFAMILY SSF53223 6 105 9.21E-32 T 12-10-2018 K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.1E-84 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 3.5E-23 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 2.8E-14 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.905 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 SUPERFAMILY SSF51735 106 273 4.44E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 Gene3D G3DSA:3.40.50.720 119 239 4.6E-83 T 12-10-2018 K04M3_31860 b7177161ba498286d6d54dbe38b4d976 277 Gene3D G3DSA:3.40.50.10860 8 258 4.6E-83 T 12-10-2018 K04M3_44150 8f77d797b89b352ad9313e2ccfc354af 97 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 94 2.8E-26 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 K04M3_44150 8f77d797b89b352ad9313e2ccfc354af 97 Pfam PF03334 Na+/H+ antiporter subunit 8 86 1.5E-24 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 39.093 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 210 3.6E-77 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 Gene3D G3DSA:3.40.630.20 1 212 3.5E-79 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 PIRSF PIRSF015592 1 210 4.4E-83 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 Pfam PF01470 Pyroglutamyl peptidase 2 198 1.8E-78 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 SUPERFAMILY SSF53182 1 202 2.09E-71 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.8E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.8E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.8E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 1.8E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 K04M3_37790 b49c7b83f564f8ce5c0749b69c461ae4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.8E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 K04M3_04950 785f4e7fb04888c678140a0dfac6a8f3 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 2.0E-22 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 K04M3_04950 785f4e7fb04888c678140a0dfac6a8f3 382 Pfam PF02690 Na+/Pi-cotransporter 218 333 1.2E-18 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 K04M3_47530 04c0f14824c78ccd3191c986ec972e42 417 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 146 157 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 K04M3_47530 04c0f14824c78ccd3191c986ec972e42 417 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 146 404 1.2E-18 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 K04M3_47530 04c0f14824c78ccd3191c986ec972e42 417 Gene3D G3DSA:3.40.50.1110 132 411 2.7E-40 T 12-10-2018 IPR036514 SGNH hydrolase superfamily K04M3_47530 04c0f14824c78ccd3191c986ec972e42 417 SUPERFAMILY SSF52266 145 407 6.0E-23 T 12-10-2018 K04M3_15180 ffe54e0d9ba7ba8af4dee8e68a08b9de 95 Gene3D G3DSA:3.30.70.100 1 93 5.6E-21 T 12-10-2018 K04M3_15180 ffe54e0d9ba7ba8af4dee8e68a08b9de 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 80 7.5E-11 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain K04M3_15180 ffe54e0d9ba7ba8af4dee8e68a08b9de 95 SUPERFAMILY SSF54909 4 88 1.88E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_42660 55e07684131dffc80e5217561b188c5c 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 K04M3_42660 55e07684131dffc80e5217561b188c5c 128 Gene3D G3DSA:3.10.180.10 1 128 7.9E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_42660 55e07684131dffc80e5217561b188c5c 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 3.2E-60 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 K04M3_42660 55e07684131dffc80e5217561b188c5c 128 SUPERFAMILY SSF54593 1 126 8.99E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_42660 55e07684131dffc80e5217561b188c5c 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.9E-24 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_11920 eab6680d5367a6355cb354461461295e 414 Gene3D G3DSA:1.20.1090.10 187 382 7.0E-41 T 12-10-2018 K04M3_11920 eab6680d5367a6355cb354461461295e 414 Gene3D G3DSA:3.40.50.1970 1 180 2.7E-47 T 12-10-2018 K04M3_11920 eab6680d5367a6355cb354461461295e 414 SUPERFAMILY SSF56796 1 380 4.06E-88 T 12-10-2018 K04M3_11920 eab6680d5367a6355cb354461461295e 414 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 1.2E-89 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.9E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 Pfam PF00106 short chain dehydrogenase 3 192 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 SUPERFAMILY SSF51735 1 230 1.25E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_16690 f301373906ba22ad17ded9b9eb556fe5 230 Gene3D G3DSA:3.40.50.720 1 230 6.2E-65 T 12-10-2018 K04M3_39540 64e9472d72b6216d5c8743f9a0647e61 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 K04M3_39540 64e9472d72b6216d5c8743f9a0647e61 156 Gene3D G3DSA:3.20.20.70 4 155 1.2E-18 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_39540 64e9472d72b6216d5c8743f9a0647e61 156 Pfam PF13353 4Fe-4S single cluster domain 12 144 2.7E-40 T 12-10-2018 K04M3_39540 64e9472d72b6216d5c8743f9a0647e61 156 SUPERFAMILY SSF102114 16 147 2.35E-5 T 12-10-2018 K04M3_39540 64e9472d72b6216d5c8743f9a0647e61 156 PIRSF PIRSF000368 1 155 3.0E-49 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 K04M3_39540 64e9472d72b6216d5c8743f9a0647e61 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 146 1.6E-48 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:1.10.230.10 268 376 1.7E-150 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PIRSF PIRSF001369 38 429 1.4E-174 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 SUPERFAMILY SSF48256 4 428 1.03E-170 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:1.10.580.10 57 411 1.7E-150 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 5.5E-135 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.1E-238 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 K04M3_08370 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:2.20.28.60 1 50 1.6E-26 T 12-10-2018 K04M3_48890 b31de399bc369a7e413e90d86cae14c9 103 SUPERFAMILY SSF51182 2 102 9.19E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_48890 b31de399bc369a7e413e90d86cae14c9 103 Pfam PF07883 Cupin domain 42 101 7.1E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel K04M3_48890 b31de399bc369a7e413e90d86cae14c9 103 Gene3D G3DSA:2.60.120.10 13 103 5.8E-38 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_06240 0fa3a5c40e4f5b5880fd99788b6be68a 119 SUPERFAMILY SSF54285 6 82 6.21E-26 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp K04M3_06240 0fa3a5c40e4f5b5880fd99788b6be68a 119 Pfam PF03658 RnfH family Ubiquitin 8 90 7.7E-34 T 12-10-2018 IPR005346 RnfH protein K04M3_06240 0fa3a5c40e4f5b5880fd99788b6be68a 119 Gene3D G3DSA:3.10.20.280 2 92 2.9E-33 T 12-10-2018 IPR037021 RnfH superfamily K04M3_06240 0fa3a5c40e4f5b5880fd99788b6be68a 119 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.751 T 12-10-2018 IPR005346 RnfH protein K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 Gene3D G3DSA:3.40.50.2300 12 142 5.1E-25 T 12-10-2018 K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 Gene3D G3DSA:1.10.10.10 144 214 1.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 5.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 SMART SM00421 151 208 2.1E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_28410 61fee157a08a379570cd8fe93e311e5c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_27030 12c37f0c4b370c5486299078720a4f3c 199 Gene3D G3DSA:3.40.50.10420 3 197 5.2E-56 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily K04M3_27030 12c37f0c4b370c5486299078720a4f3c 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 6.4E-43 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase K04M3_27030 12c37f0c4b370c5486299078720a4f3c 199 SUPERFAMILY SSF100950 5 196 1.95E-57 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_27030 12c37f0c4b370c5486299078720a4f3c 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 3.8E-51 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase K04M3_27030 12c37f0c4b370c5486299078720a4f3c 199 PIRSF PIRSF006806 4 192 6.3E-36 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase K04M3_00540 72da84669bb6b0876c6f11bfc8b4c1c8 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.9E-107 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 K04M3_00540 72da84669bb6b0876c6f11bfc8b4c1c8 458 PIRSF PIRSF002746 9 458 8.1E-145 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 K04M3_00540 72da84669bb6b0876c6f11bfc8b4c1c8 458 Pfam PF02447 GntP family permease 14 456 1.9E-117 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 K04M3_19400 fac4b4ec31503b2ebf435f78a02ccea6 458 Pfam PF04317 YcjX-like family, DUF463 20 457 3.0E-187 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein K04M3_19400 fac4b4ec31503b2ebf435f78a02ccea6 458 PIRSF PIRSF019381 1 458 5.5E-199 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein K04M3_23820 7084a4113b26150ead4e235a120aaa01 104 SUPERFAMILY SSF46626 4 104 4.8E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_23820 7084a4113b26150ead4e235a120aaa01 104 PRINTS PR00605 Class IC cytochrome C signature 78 100 7.7E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 K04M3_23820 7084a4113b26150ead4e235a120aaa01 104 PRINTS PR00605 Class IC cytochrome C signature 33 44 7.7E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 K04M3_23820 7084a4113b26150ead4e235a120aaa01 104 Gene3D G3DSA:1.10.760.10 22 104 1.9E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_23820 7084a4113b26150ead4e235a120aaa01 104 Pfam PF00034 Cytochrome c 34 104 3.6E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 SUPERFAMILY SSF56796 4 360 1.96E-117 T 12-10-2018 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.391 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 Gene3D G3DSA:1.20.1090.10 177 366 6.1E-70 T 12-10-2018 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 3.2E-120 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 PIRSF PIRSF001455 22 363 3.0E-107 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 Gene3D G3DSA:3.40.50.1970 1 176 1.2E-65 T 12-10-2018 K04M3_28830 2cace31a4d7636a4058d63340a8be391 366 Pfam PF01761 3-dehydroquinate synthase 72 329 3.6E-111 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 K04M3_40150 0b31b6c9ac87a83b7867b48b0dc53fe4 386 Pfam PF07690 Major Facilitator Superfamily 19 343 6.7E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_40150 0b31b6c9ac87a83b7867b48b0dc53fe4 386 SUPERFAMILY SSF103473 18 379 7.46E-33 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_40150 0b31b6c9ac87a83b7867b48b0dc53fe4 386 Gene3D G3DSA:1.20.1250.20 13 194 1.1E-16 T 12-10-2018 K04M3_40150 0b31b6c9ac87a83b7867b48b0dc53fe4 386 Gene3D G3DSA:1.20.1250.20 202 383 1.1E-9 T 12-10-2018 K04M3_25780 091916b1f524792979108404902da9c6 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.359 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 K04M3_25780 091916b1f524792979108404902da9c6 395 Gene3D G3DSA:3.10.290.10 326 394 1.0E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_25780 091916b1f524792979108404902da9c6 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_25780 091916b1f524792979108404902da9c6 395 Gene3D G3DSA:3.40.50.620 5 217 1.1E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_25780 091916b1f524792979108404902da9c6 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.3E-79 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_25780 091916b1f524792979108404902da9c6 395 Pfam PF01479 S4 domain 338 374 2.5E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_25780 091916b1f524792979108404902da9c6 395 Gene3D G3DSA:1.10.240.10 218 325 1.7E-34 T 12-10-2018 K04M3_25780 091916b1f524792979108404902da9c6 395 SUPERFAMILY SSF52374 6 316 1.05E-97 T 12-10-2018 K04M3_25780 091916b1f524792979108404902da9c6 395 SMART SM00363 334 393 9.5E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_25780 091916b1f524792979108404902da9c6 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 1.3E-126 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_25780 091916b1f524792979108404902da9c6 395 SUPERFAMILY SSF55174 297 394 3.93E-16 T 12-10-2018 K04M3_25780 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_25780 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_25780 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_25780 091916b1f524792979108404902da9c6 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 K04M3_35160 ec70034e25529fe8edde201b2afcfa8d 494 Gene3D G3DSA:1.25.40.10 171 318 8.2E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_35160 ec70034e25529fe8edde201b2afcfa8d 494 SMART SM00028 87 120 360.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_35160 ec70034e25529fe8edde201b2afcfa8d 494 SMART SM00028 127 160 49.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_35160 ec70034e25529fe8edde201b2afcfa8d 494 SMART SM00028 207 240 3.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_35160 ec70034e25529fe8edde201b2afcfa8d 494 SUPERFAMILY SSF48452 65 315 1.12E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_35160 ec70034e25529fe8edde201b2afcfa8d 494 Gene3D G3DSA:1.25.40.10 3 170 4.5E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_11660 dd6e38181ce1e91af19e715cb1a01891 386 Gene3D G3DSA:3.40.190.10 74 359 1.6E-14 T 12-10-2018 K04M3_11660 dd6e38181ce1e91af19e715cb1a01891 386 SUPERFAMILY SSF53850 39 384 3.57E-39 T 12-10-2018 K04M3_11660 dd6e38181ce1e91af19e715cb1a01891 386 Pfam PF13416 Bacterial extracellular solute-binding protein 62 351 6.3E-22 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein K04M3_11660 dd6e38181ce1e91af19e715cb1a01891 386 Gene3D G3DSA:3.40.190.10 158 383 1.6E-14 T 12-10-2018 K04M3_11660 dd6e38181ce1e91af19e715cb1a01891 386 PIRSF PIRSF029172 1 386 4.7E-175 T 12-10-2018 IPR027020 Protein ynjB K04M3_44220 09a75f294ba1e5ec6e4acc047e28221a 311 Pfam PF00582 Universal stress protein family 151 301 3.0E-16 T 12-10-2018 IPR006016 UspA K04M3_44220 09a75f294ba1e5ec6e4acc047e28221a 311 SUPERFAMILY SSF52402 1 142 1.34E-10 T 12-10-2018 K04M3_44220 09a75f294ba1e5ec6e4acc047e28221a 311 Gene3D G3DSA:3.40.50.12370 1 311 4.1E-84 T 12-10-2018 K04M3_44220 09a75f294ba1e5ec6e4acc047e28221a 311 SUPERFAMILY SSF52402 151 309 1.09E-20 T 12-10-2018 K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 Gene3D G3DSA:3.40.50.300 3 288 1.4E-80 T 12-10-2018 K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 Pfam PF08402 TOBE domain 257 330 7.7E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 Pfam PF00005 ABC transporter 20 161 2.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 SUPERFAMILY SSF52540 4 240 8.91E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 SUPERFAMILY SSF50331 250 334 4.19E-7 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal K04M3_46450 f88aed65f8554c36cf9cc26fd88ce821 339 SMART SM00382 28 211 1.7E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35430 245f7c7aa4bcfca9f06324347ae50cda 66 SUPERFAMILY SSF116734 10 51 5.56E-5 T 12-10-2018 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 SUPERFAMILY SSF102114 23 220 9.81E-30 T 12-10-2018 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 1.5E-20 T 12-10-2018 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 Gene3D G3DSA:3.20.20.70 2 246 2.0E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 Pfam PF04055 Radical SAM superfamily 24 178 2.8E-32 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-109 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 PIRSF PIRSF000371 44 244 2.8E-45 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 K04M3_09830 f89e54ee973ce332e3c448662b6a8842 246 PIRSF PIRSF000371 2 47 3.0E-11 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 K04M3_45980 2fa84aba4ad6a2897f898da8163ea500 380 SUPERFAMILY SSF56935 33 372 1.83E-20 T 12-10-2018 K04M3_45980 2fa84aba4ad6a2897f898da8163ea500 380 Gene3D G3DSA:2.40.160.10 29 337 2.5E-9 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_38070 1ce7143e7a6c9426be21ded068626399 337 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 186 5.5E-41 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain K04M3_38070 1ce7143e7a6c9426be21ded068626399 337 SUPERFAMILY SSF52540 11 207 4.88E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_38070 1ce7143e7a6c9426be21ded068626399 337 Gene3D G3DSA:3.40.50.300 8 210 1.0E-47 T 12-10-2018 K04M3_13580 9ea7d33f229b04f4ae8ff9b79f521e6c 166 SUPERFAMILY SSF55729 1 164 2.44E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_13580 9ea7d33f229b04f4ae8ff9b79f521e6c 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 161 2.5E-14 T 12-10-2018 K04M3_13580 9ea7d33f229b04f4ae8ff9b79f521e6c 166 Gene3D G3DSA:3.40.630.30 3 166 3.6E-32 T 12-10-2018 K04M3_13950 9ea7d33f229b04f4ae8ff9b79f521e6c 166 SUPERFAMILY SSF55729 1 164 2.44E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_13950 9ea7d33f229b04f4ae8ff9b79f521e6c 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 161 2.5E-14 T 12-10-2018 K04M3_13950 9ea7d33f229b04f4ae8ff9b79f521e6c 166 Gene3D G3DSA:3.40.630.30 3 166 3.6E-32 T 12-10-2018 K04M3_36810 4ed78373bff70135e5955d39969aac6a 348 SUPERFAMILY SSF51004 93 332 1.1E-30 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily K04M3_36810 4ed78373bff70135e5955d39969aac6a 348 Gene3D G3DSA:2.130.10.10 2 346 4.2E-91 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_36810 4ed78373bff70135e5955d39969aac6a 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 345 8.2E-93 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller K04M3_06470 d63ee5557f6c0dce0fc684545a8133ca 355 PIRSF PIRSF039012 3 324 2.1E-94 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_06470 d63ee5557f6c0dce0fc684545a8133ca 355 SUPERFAMILY SSF53187 22 318 1.39E-77 T 12-10-2018 K04M3_06470 d63ee5557f6c0dce0fc684545a8133ca 355 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 4.0E-72 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_06470 d63ee5557f6c0dce0fc684545a8133ca 355 Gene3D G3DSA:3.40.630.10 14 320 1.5E-93 T 12-10-2018 K04M3_15260 4196b56e912a034608eb2143dfd2b3b5 176 Pfam PF00929 Exonuclease 7 171 1.1E-12 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_15260 4196b56e912a034608eb2143dfd2b3b5 176 SMART SM00479 5 176 4.9E-5 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_15260 4196b56e912a034608eb2143dfd2b3b5 176 SUPERFAMILY SSF53098 4 175 2.28E-29 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_15260 4196b56e912a034608eb2143dfd2b3b5 176 Gene3D G3DSA:3.30.420.10 1 176 1.3E-38 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_42200 cfd1f3a57c77a7c205671a713d44560b 306 SUPERFAMILY SSF161098 72 290 7.33E-41 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_42200 cfd1f3a57c77a7c205671a713d44560b 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 2.1E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_42200 cfd1f3a57c77a7c205671a713d44560b 306 Gene3D G3DSA:1.10.3720.10 66 303 2.2E-50 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_42200 cfd1f3a57c77a7c205671a713d44560b 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 4.2E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_41570 10cfe681f02103cf94670b522a1b1211 103 Gene3D G3DSA:3.30.780.10 23 103 1.2E-33 T 12-10-2018 K04M3_41570 10cfe681f02103cf94670b522a1b1211 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.8E-19 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 K04M3_41570 10cfe681f02103cf94670b522a1b1211 103 SUPERFAMILY SSF55159 3 99 8.24E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 K04M3_41570 10cfe681f02103cf94670b522a1b1211 103 PIRSF PIRSF037511 1 103 1.6E-33 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 K04M3_41570 10cfe681f02103cf94670b522a1b1211 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 2.3E-39 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 K04M3_20150 2e3873ad08238934c8bee7bf4f25ff04 206 Pfam PF01300 Telomere recombination 23 198 1.2E-46 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 K04M3_20150 2e3873ad08238934c8bee7bf4f25ff04 206 SUPERFAMILY SSF55821 1 203 6.71E-65 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily K04M3_20150 2e3873ad08238934c8bee7bf4f25ff04 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 5.5E-72 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 K04M3_20150 2e3873ad08238934c8bee7bf4f25ff04 206 Gene3D G3DSA:3.90.870.10 1 205 3.1E-69 T 12-10-2018 K04M3_34450 9f423577e05ba1f4672643327f601019 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 7.2E-23 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 K04M3_34450 9f423577e05ba1f4672643327f601019 128 Pfam PF02561 Flagellar protein FliS 7 122 3.1E-32 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 K04M3_34450 9f423577e05ba1f4672643327f601019 128 SUPERFAMILY SSF101116 9 126 2.49E-34 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 K04M3_34450 9f423577e05ba1f4672643327f601019 128 Gene3D G3DSA:1.20.120.340 1 127 1.2E-35 T 12-10-2018 K04M3_34450 9f423577e05ba1f4672643327f601019 128 PIRSF PIRSF039090 1 128 1.1E-39 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 SUPERFAMILY SSF46785 4 112 3.19E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 Gene3D G3DSA:3.40.190.290 91 294 3.7E-56 T 12-10-2018 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 Gene3D G3DSA:1.10.10.10 1 90 5.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 SUPERFAMILY SSF53850 89 296 5.89E-40 T 12-10-2018 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34070 b1e1e9004fe50a0e89cdd9963dde01d2 307 Pfam PF03466 LysR substrate binding domain 88 294 6.1E-39 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_49090 a0ff114af0c4db882d56b26686808d90 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 3.3E-57 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_49090 a0ff114af0c4db882d56b26686808d90 446 PIRSF PIRSF006603 2 446 1.9E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_49090 a0ff114af0c4db882d56b26686808d90 446 Pfam PF01554 MatE 19 179 1.4E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_49090 a0ff114af0c4db882d56b26686808d90 446 Pfam PF01554 MatE 247 404 9.6E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_36460 514cb67825238133b272008bf664080d 449 Gene3D G3DSA:3.20.20.80 9 379 1.4E-77 T 12-10-2018 K04M3_36460 514cb67825238133b272008bf664080d 449 SMART SM00642 13 374 4.6E-22 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_36460 514cb67825238133b272008bf664080d 449 PRINTS PR00110 Alpha-amylase signature 230 248 2.2E-15 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 K04M3_36460 514cb67825238133b272008bf664080d 449 PRINTS PR00110 Alpha-amylase signature 88 99 2.2E-15 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 K04M3_36460 514cb67825238133b272008bf664080d 449 PRINTS PR00110 Alpha-amylase signature 55 72 2.2E-15 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 K04M3_36460 514cb67825238133b272008bf664080d 449 PRINTS PR00110 Alpha-amylase signature 201 212 2.2E-15 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 K04M3_36460 514cb67825238133b272008bf664080d 449 PRINTS PR00110 Alpha-amylase signature 296 308 2.2E-15 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 K04M3_36460 514cb67825238133b272008bf664080d 449 SUPERFAMILY SSF51445 10 344 4.69E-62 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_36460 514cb67825238133b272008bf664080d 449 Pfam PF00128 Alpha amylase, catalytic domain 28 238 1.7E-16 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_36180 9c3700d8c964abec66f62bdbfb38b26e 478 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 45 464 1.2E-177 T 12-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW K04M3_36180 9c3700d8c964abec66f62bdbfb38b26e 478 Pfam PF04055 Radical SAM superfamily 89 259 1.0E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_36180 9c3700d8c964abec66f62bdbfb38b26e 478 SMART SM00729 84 307 2.1E-41 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_36180 9c3700d8c964abec66f62bdbfb38b26e 478 Gene3D G3DSA:3.80.30.20 51 386 3.6E-73 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe K04M3_36180 9c3700d8c964abec66f62bdbfb38b26e 478 SUPERFAMILY SSF102114 82 461 8.24E-81 T 12-10-2018 K04M3_23670 364dfe806394f2099bdf4e1895ea698d 191 Gene3D G3DSA:3.40.50.10490 1 191 6.3E-70 T 12-10-2018 K04M3_23670 364dfe806394f2099bdf4e1895ea698d 191 SUPERFAMILY SSF53697 1 189 4.45E-51 T 12-10-2018 K04M3_23670 364dfe806394f2099bdf4e1895ea698d 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.3E-81 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 K04M3_23670 364dfe806394f2099bdf4e1895ea698d 191 Pfam PF13580 SIS domain 12 146 9.5E-30 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_23670 364dfe806394f2099bdf4e1895ea698d 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.527 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 SUPERFAMILY SSF46626 63 137 8.49E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 136 9.6E-16 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 Gene3D G3DSA:1.10.760.10 62 139 7.6E-34 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 PRINTS PR00607 Class IE cytochrome C signature 72 83 2.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 PRINTS PR00607 Class IE cytochrome C signature 83 93 2.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 PRINTS PR00607 Class IE cytochrome C signature 126 137 2.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 K04M3_00360 0e15669f31a0a356dacc0f2c1c224925 140 PRINTS PR00607 Class IE cytochrome C signature 111 123 2.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82693 672 856 3.14E-26 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82714 722 809 7.46E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82714 182 272 4.05E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82866 831 1025 1.57E-40 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.8E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82693 136 330 5.75E-24 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82693 565 670 1.36E-30 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82866 296 497 1.26E-48 T 12-10-2018 K04M3_10670 e232b5fa522b88e0c3eeb95de3f6fea7 1053 SUPERFAMILY SSF82693 38 131 1.26E-24 T 12-10-2018 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 SUPERFAMILY SSF51984 1 89 4.71E-23 T 12-10-2018 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 6.0E-259 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 SUPERFAMILY SSF53244 311 448 2.9E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Gene3D G3DSA:3.40.1190.10 91 313 4.7E-57 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.329 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Gene3D G3DSA:3.90.190.20 314 450 1.5E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Pfam PF08245 Mur ligase middle domain 108 291 4.4E-21 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Gene3D G3DSA:3.40.50.720 1 90 8.1E-36 T 12-10-2018 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 6.4E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 8.1E-19 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 K04M3_03180 2afbde5ef34bf5f3e00308f092d48fae 452 SUPERFAMILY SSF53623 97 308 3.01E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_12920 4f26704861dfab5524db650fcda6c9f2 148 SUPERFAMILY SSF143749 3 145 6.54E-20 T 12-10-2018 IPR035934 Phage tail protein-like superfamily K04M3_12920 4f26704861dfab5524db650fcda6c9f2 148 Pfam PF06141 Phage minor tail protein U 3 144 1.9E-16 T 12-10-2018 IPR009312 Minor tail protein U-like K04M3_12920 4f26704861dfab5524db650fcda6c9f2 148 Gene3D G3DSA:3.30.70.1700 3 146 3.3E-31 T 12-10-2018 IPR038512 GpU-like superfamily K04M3_34550 249558bc62b5a8f5202992b45228e795 123 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 42 116 9.3E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 K04M3_34550 249558bc62b5a8f5202992b45228e795 123 SUPERFAMILY SSF101801 41 116 4.84E-19 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_34550 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 6.1E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_34550 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 6.1E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_34550 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 6.1E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_34550 249558bc62b5a8f5202992b45228e795 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 6.1E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_34550 249558bc62b5a8f5202992b45228e795 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 46 113 1.5E-19 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) K04M3_34550 249558bc62b5a8f5202992b45228e795 123 Gene3D G3DSA:2.30.330.10 30 119 2.6E-23 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_11810 67433dc4650b8675394a19bdcee27f01 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 4.7E-59 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_11810 67433dc4650b8675394a19bdcee27f01 458 Pfam PF01554 MatE 25 185 1.5E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_11810 67433dc4650b8675394a19bdcee27f01 458 Pfam PF01554 MatE 252 413 1.6E-19 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_11810 67433dc4650b8675394a19bdcee27f01 458 PIRSF PIRSF006603 9 458 7.0E-64 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_22960 588c33d574995820a836ca024aff1f09 144 SUPERFAMILY SSF160214 62 140 6.28E-22 T 12-10-2018 IPR035924 FlaG-like superfamily K04M3_22960 588c33d574995820a836ca024aff1f09 144 Gene3D G3DSA:3.30.160.170 37 136 5.5E-13 T 12-10-2018 IPR035924 FlaG-like superfamily K04M3_22960 588c33d574995820a836ca024aff1f09 144 Pfam PF03646 FlaG protein 44 142 2.8E-24 T 12-10-2018 IPR005186 FlaG protein K04M3_45850 7e9fb4bf2a3998dbbffb0c3a47d49eab 135 Pfam PF05036 Sporulation related domain 44 118 7.5E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_45850 7e9fb4bf2a3998dbbffb0c3a47d49eab 135 Gene3D G3DSA:3.30.70.1070 33 126 6.7E-20 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_45850 7e9fb4bf2a3998dbbffb0c3a47d49eab 135 SUPERFAMILY SSF110997 44 109 1.44E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_34230 4084dc5c643c319cd5b836953065fbab 156 Gene3D G3DSA:3.40.630.30 3 155 2.5E-22 T 12-10-2018 K04M3_34230 4084dc5c643c319cd5b836953065fbab 156 Pfam PF00583 Acetyltransferase (GNAT) family 40 134 5.5E-10 T 12-10-2018 IPR000182 GNAT domain K04M3_34230 4084dc5c643c319cd5b836953065fbab 156 SUPERFAMILY SSF55729 1 152 3.96E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_32070 23246598253fe433b78ec960fa5874b2 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 3.5E-27 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 K04M3_32070 23246598253fe433b78ec960fa5874b2 200 SUPERFAMILY SSF52833 20 197 6.26E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_32070 23246598253fe433b78ec960fa5874b2 200 Gene3D G3DSA:3.40.30.10 17 200 1.6E-53 T 12-10-2018 K04M3_32070 23246598253fe433b78ec960fa5874b2 200 PIRSF PIRSF001488 1 200 1.6E-68 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL K04M3_32070 23246598253fe433b78ec960fa5874b2 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_21400 4853ef978760da595cee43a022bdce38 714 SUPERFAMILY SSF52540 1 240 1.79E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21400 4853ef978760da595cee43a022bdce38 714 Pfam PF07085 DRTGG domain 233 344 5.2E-27 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 K04M3_21400 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.50.10950 398 709 4.3E-134 T 12-10-2018 K04M3_21400 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.50.10750 529 682 4.3E-134 T 12-10-2018 K04M3_21400 4853ef978760da595cee43a022bdce38 714 Pfam PF13500 AAA domain 3 229 5.8E-51 T 12-10-2018 K04M3_21400 4853ef978760da595cee43a022bdce38 714 SUPERFAMILY SSF53659 392 709 3.95E-96 T 12-10-2018 K04M3_21400 4853ef978760da595cee43a022bdce38 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.3E-132 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 K04M3_21400 4853ef978760da595cee43a022bdce38 714 SUPERFAMILY SSF75138 229 353 1.26E-23 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily K04M3_21400 4853ef978760da595cee43a022bdce38 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 2.6E-125 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 K04M3_21400 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.1390.20 225 365 1.3E-12 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily K04M3_21400 4853ef978760da595cee43a022bdce38 714 Gene3D G3DSA:3.40.50.300 5 217 4.7E-14 T 12-10-2018 K04M3_21400 4853ef978760da595cee43a022bdce38 714 PIRSF PIRSF006107 1 714 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Gene3D G3DSA:3.60.20.10 2 241 6.7E-82 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.1E-258 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Gene3D G3DSA:3.40.50.10490 448 595 2.2E-144 T 12-10-2018 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.456 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 SUPERFAMILY SSF53697 245 610 1.58E-113 T 12-10-2018 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 1.1E-21 T 12-10-2018 K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 SUPERFAMILY SSF56235 2 234 4.03E-76 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_03610 7769eeb664fa9bfac45485887ea2c5a2 610 Gene3D G3DSA:3.40.50.10490 249 609 2.2E-144 T 12-10-2018 K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 2.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Gene3D G3DSA:1.10.10.10 122 232 1.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SMART SM00862 152 227 1.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SMART SM00448 4 114 8.3E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-41 T 12-10-2018 K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Pfam PF00072 Response regulator receiver domain 6 115 3.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SUPERFAMILY SSF52172 2 131 5.98E-45 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_33130 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SUPERFAMILY SSF46894 132 229 1.05E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_14690 e7c19806b82bd0997adb1bd794dfd590 128 SUPERFAMILY SSF51182 10 127 7.37E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_14690 e7c19806b82bd0997adb1bd794dfd590 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-58 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 K04M3_14690 e7c19806b82bd0997adb1bd794dfd590 128 Pfam PF06339 Ectoine synthase 1 127 1.0E-60 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 K04M3_14690 e7c19806b82bd0997adb1bd794dfd590 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 38.982 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 K04M3_14690 e7c19806b82bd0997adb1bd794dfd590 128 Gene3D G3DSA:2.60.120.10 1 116 3.2E-44 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.6E-135 T 12-10-2018 IPR033752 MetA family K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 9.0E-128 T 12-10-2018 K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 8.0E-161 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 SUPERFAMILY SSF52317 18 297 3.41E-101 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 Gene3D G3DSA:3.40.50.880 1 301 2.9E-124 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 PIRSF PIRSF000450 1 309 8.0E-148 T 12-10-2018 IPR033752 MetA family K04M3_14220 501fc273853fa59687cb2ad96e0a1002 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.893 T 12-10-2018 IPR033752 MetA family K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 6.8E-29 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 6.8E-29 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 6.8E-29 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 6.8E-29 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 SMART SM00839 201 448 9.4E-76 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 Gene3D G3DSA:1.10.285.10 3 385 1.8E-162 T 12-10-2018 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 7.0E-52 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 PIRSF PIRSF000185 19 450 4.1E-113 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 SUPERFAMILY SSF53223 5 193 2.33E-73 T 12-10-2018 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 Gene3D G3DSA:3.40.50.10860 52 187 1.8E-162 T 12-10-2018 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 Gene3D G3DSA:1.10.285.10 386 450 8.2E-9 T 12-10-2018 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 Gene3D G3DSA:3.40.50.720 206 375 1.8E-162 T 12-10-2018 K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 SUPERFAMILY SSF51735 199 449 8.83E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_43580 46d67098ef07646c137c8c6bd865b1be 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 448 4.4E-80 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 K04M3_25130 971342f402090811cf3643b5c36bc835 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 9.5E-64 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 K04M3_25130 971342f402090811cf3643b5c36bc835 351 Gene3D G3DSA:3.20.20.190 21 350 6.5E-124 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 K04M3_25130 971342f402090811cf3643b5c36bc835 351 SUPERFAMILY SSF51695 22 349 6.02E-91 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 K04M3_48650 267cf6f44774af07c8d2783385e340f9 155 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 130 1.5E-10 T 12-10-2018 K04M3_48650 267cf6f44774af07c8d2783385e340f9 155 SUPERFAMILY SSF56784 4 141 2.98E-23 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_48650 267cf6f44774af07c8d2783385e340f9 155 Gene3D G3DSA:3.40.50.1000 1 155 1.0E-28 T 12-10-2018 IPR023214 HAD superfamily K04M3_41720 b8cc184b0257309d042907eaaec26349 165 SUPERFAMILY SSF52266 3 164 1.39E-44 T 12-10-2018 K04M3_41720 b8cc184b0257309d042907eaaec26349 165 Gene3D G3DSA:3.40.50.1110 1 165 3.1E-56 T 12-10-2018 IPR036514 SGNH hydrolase superfamily K04M3_41720 b8cc184b0257309d042907eaaec26349 165 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 148 1.3E-19 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain K04M3_09730 22e5d6163a22770b7885816889a7253c 751 SUPERFAMILY SSF56281 494 736 8.96E-42 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_09730 22e5d6163a22770b7885816889a7253c 751 SMART SM00849 505 688 3.6E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_09730 22e5d6163a22770b7885816889a7253c 751 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 2.4E-27 T 12-10-2018 IPR004477 ComEC/Rec2-related protein K04M3_09730 22e5d6163a22770b7885816889a7253c 751 Pfam PF00753 Metallo-beta-lactamase superfamily 503 684 7.0E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_09730 22e5d6163a22770b7885816889a7253c 751 Gene3D G3DSA:3.60.15.10 494 730 1.9E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_09730 22e5d6163a22770b7885816889a7253c 751 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 132 716 3.3E-118 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 K04M3_09730 22e5d6163a22770b7885816889a7253c 751 Pfam PF03772 Competence protein 208 466 1.9E-55 T 12-10-2018 IPR004477 ComEC/Rec2-related protein K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 Gene3D G3DSA:3.40.50.300 1 214 8.6E-78 T 12-10-2018 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.753 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 SUPERFAMILY SSF52540 1 193 5.43E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.1E-75 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 Pfam PF00406 Adenylate kinase 5 185 2.6E-59 T 12-10-2018 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 K04M3_08180 1b2c78ce5b5689bab57bbf2a2874d664 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 280 9.2E-75 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 SUPERFAMILY SSF54631 312 464 1.46E-22 T 12-10-2018 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 Pfam PF00571 CBS domain 382 464 1.7E-4 T 12-10-2018 IPR000644 CBS domain K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 Pfam PF00571 CBS domain 313 365 2.4E-10 T 12-10-2018 IPR000644 CBS domain K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 7.2E-112 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 Gene3D G3DSA:1.20.1080.10 4 270 3.8E-87 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 Gene3D G3DSA:3.10.580.10 309 465 5.4E-26 T 12-10-2018 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 Pfam PF01226 Formate/nitrite transporter 17 277 1.2E-70 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 SMART SM00116 320 368 4.6E-7 T 12-10-2018 IPR000644 CBS domain K04M3_41970 85414e407fbaba0bfdc9b53f951fe47c 483 SMART SM00116 418 465 13.0 T 12-10-2018 IPR000644 CBS domain K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 Pfam PF00491 Arginase family 47 325 1.2E-59 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 PIRSF PIRSF036979 25 333 4.7E-25 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 1.4E-113 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 Gene3D G3DSA:3.40.800.10 7 335 2.0E-129 T 12-10-2018 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.368 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 K04M3_12310 d5a0ce28ac1c9463ad76cbf418ecca2c 336 SUPERFAMILY SSF52768 13 333 1.8E-83 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SUPERFAMILY SSF50998 28 328 1.02E-44 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 68 106 8.6 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 233 274 0.031 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 285 323 170.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 192 230 0.11 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 23 62 180.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 SMART SM00320 150 189 4.4E-5 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 Pfam PF13360 PQQ-like domain 170 282 9.4E-6 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 Gene3D G3DSA:2.130.10.10 117 328 8.1E-38 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 12-10-2018 IPR019775 WD40 repeat, conserved site K04M3_29190 72f5261d2c5a631424b783c3a741a1c5 328 Gene3D G3DSA:2.130.10.10 21 116 3.0E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_06130 4203ec1e0465d5590e8cbf9f73e2c439 443 PIRSF PIRSF000521 1 438 5.1E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_06130 4203ec1e0465d5590e8cbf9f73e2c439 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_06130 4203ec1e0465d5590e8cbf9f73e2c439 443 Gene3D G3DSA:3.40.640.10 48 326 2.9E-152 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_06130 4203ec1e0465d5590e8cbf9f73e2c439 443 Pfam PF00202 Aminotransferase class-III 11 434 6.8E-107 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_06130 4203ec1e0465d5590e8cbf9f73e2c439 443 Gene3D G3DSA:3.90.1150.10 15 434 2.9E-152 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_06130 4203ec1e0465d5590e8cbf9f73e2c439 443 SUPERFAMILY SSF53383 7 437 2.77E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 Gene3D G3DSA:1.10.3210.10 197 365 2.4E-22 T 12-10-2018 K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 SMART SM00052 2 199 7.9E-4 T 12-10-2018 IPR001633 EAL domain K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 Pfam PF08668 HDOD domain 208 325 6.1E-13 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 SUPERFAMILY SSF141868 4 197 9.29E-28 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 Gene3D G3DSA:3.20.20.450 59 196 3.0E-17 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 PIRSF PIRSF003180 1 407 5.7E-170 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 Pfam PF00563 EAL domain 74 194 3.2E-13 T 12-10-2018 IPR001633 EAL domain K04M3_31160 7138f7671531a80e76a0ecec0c1483b7 407 SUPERFAMILY SSF109604 185 404 2.61E-40 T 12-10-2018 K04M3_20510 036a4270e70df73210d0126165cc7a38 339 Pfam PF13515 Fusaric acid resistance protein-like 182 313 4.2E-7 T 12-10-2018 K04M3_20510 036a4270e70df73210d0126165cc7a38 339 PIRSF PIRSF029594 1 330 2.9E-95 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 K04M3_20510 036a4270e70df73210d0126165cc7a38 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 3.5E-48 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 K04M3_32990 517671605f59ce0e783af773583305bd 152 Pfam PF01047 MarR family 46 103 1.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_32990 517671605f59ce0e783af773583305bd 152 SUPERFAMILY SSF46785 11 151 5.07E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_32990 517671605f59ce0e783af773583305bd 152 SMART SM00347 39 137 4.1E-26 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_32990 517671605f59ce0e783af773583305bd 152 Gene3D G3DSA:1.10.10.10 10 152 4.1E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32990 517671605f59ce0e783af773583305bd 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.4E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_32990 517671605f59ce0e783af773583305bd 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.4E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_32990 517671605f59ce0e783af773583305bd 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.4E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 3.9E-191 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 SUPERFAMILY SSF53901 4 252 6.86E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.3E-36 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 PIRSF PIRSF000447 1 416 9.6E-203 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.3E-64 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 Gene3D G3DSA:3.40.47.10 261 414 2.3E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 SUPERFAMILY SSF53901 215 414 5.76E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 Gene3D G3DSA:3.40.47.10 1 255 7.6E-92 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site K04M3_21070 5ea79f6caaeba1bb6130e6ec465d5279 416 SMART SM00825 Beta-ketoacyl synthase 6 416 5.1E-16 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 SUPERFAMILY SSF53383 1 395 1.25E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 Pfam PF00155 Aminotransferase class I and II 27 391 1.0E-83 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 Gene3D G3DSA:3.40.640.10 60 300 2.8E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_19590 3a99fce38b1583afcd002b322cea020a 396 Gene3D G3DSA:3.90.1150.10 5 392 2.8E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 SUPERFAMILY SSF103088 211 318 6.93E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 Gene3D G3DSA:2.40.160.20 10 202 1.6E-43 T 12-10-2018 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 Gene3D G3DSA:3.30.1330.60 203 324 3.2E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 301 321 5.8E-11 T 12-10-2018 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 263 280 5.8E-11 T 12-10-2018 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 281 300 5.8E-11 T 12-10-2018 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 Pfam PF00691 OmpA family 217 312 9.1E-25 T 12-10-2018 IPR006665 OmpA-like domain K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 SUPERFAMILY SSF56925 24 181 1.23E-33 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 ProSitePatterns PS01068 OmpA-like domain. 250 294 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01021 OMPA domain signature 263 279 1.5E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01021 OMPA domain signature 248 263 1.5E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 PRINTS PR01021 OMPA domain signature 218 240 1.5E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_44940 4883a65d64501f4df5becd235eed41c9 330 Pfam PF13505 Outer membrane protein beta-barrel domain 6 181 2.3E-26 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_03540 89fe1fab0f59a88f7c4fd6c95570a1bb 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_03540 89fe1fab0f59a88f7c4fd6c95570a1bb 602 SUPERFAMILY SSF56801 7 596 4.84E-114 T 12-10-2018 K04M3_03540 89fe1fab0f59a88f7c4fd6c95570a1bb 602 Gene3D G3DSA:3.40.50.12780 327 459 2.3E-30 T 12-10-2018 K04M3_03540 89fe1fab0f59a88f7c4fd6c95570a1bb 602 Pfam PF00501 AMP-binding enzyme 14 466 9.0E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_03540 89fe1fab0f59a88f7c4fd6c95570a1bb 602 Gene3D G3DSA:3.40.50.12780 1 326 2.4E-53 T 12-10-2018 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 Gene3D G3DSA:1.20.1250.20 1 224 1.3E-73 T 12-10-2018 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 Gene3D G3DSA:1.20.1250.20 225 456 1.3E-60 T 12-10-2018 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 217 3.2E-59 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 440 2.6E-47 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 Pfam PF00854 POT family 230 405 1.3E-31 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 Pfam PF00854 POT family 85 197 2.7E-28 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 K04M3_08200 17f867845f8f3c936da66c2f1de2a6e2 462 SUPERFAMILY SSF103473 7 434 5.36E-42 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_09050 9b11c6be22a4267cff040c3860d396ea 332 Gene3D G3DSA:3.40.190.170 27 328 2.8E-90 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily K04M3_09050 9b11c6be22a4267cff040c3860d396ea 332 PIRSF PIRSF006470 1 332 5.2E-124 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 K04M3_09050 9b11c6be22a4267cff040c3860d396ea 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 6.6E-104 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 K04M3_09050 9b11c6be22a4267cff040c3860d396ea 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 3.6E-80 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 K04M3_02820 0f1e8baca098fab2e799150fe28fa0c9 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02820 0f1e8baca098fab2e799150fe28fa0c9 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.069 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 K04M3_02820 0f1e8baca098fab2e799150fe28fa0c9 144 Gene3D G3DSA:3.100.10.10 70 144 2.7E-13 T 12-10-2018 K04M3_02820 0f1e8baca098fab2e799150fe28fa0c9 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 3.5E-50 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02820 0f1e8baca098fab2e799150fe28fa0c9 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily K04M3_02820 0f1e8baca098fab2e799150fe28fa0c9 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P K04M3_09800 6070689991a4a7d74815a6b15fa609a0 644 Pfam PF08298 PrkA AAA domain 19 380 3.1E-177 T 12-10-2018 IPR013153 PrkA AAA domain K04M3_09800 6070689991a4a7d74815a6b15fa609a0 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 9.5E-73 T 12-10-2018 IPR010650 PrkA C-terminal domain K04M3_09800 6070689991a4a7d74815a6b15fa609a0 644 SMART SM00763 19 380 2.8E-221 T 12-10-2018 IPR013153 PrkA AAA domain K04M3_09800 6070689991a4a7d74815a6b15fa609a0 644 PIRSF PIRSF000549 1 644 4.0E-290 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 K04M3_09800 6070689991a4a7d74815a6b15fa609a0 644 SUPERFAMILY SSF52540 73 368 6.53E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43320 c2b552daa3fbbbd29fac498f86dc741c 322 SUPERFAMILY SSF46689 220 271 6.9E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_43320 c2b552daa3fbbbd29fac498f86dc741c 322 SMART SM00342 237 320 6.0E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_43320 c2b552daa3fbbbd29fac498f86dc741c 322 SUPERFAMILY SSF46689 273 321 5.02E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_43320 c2b552daa3fbbbd29fac498f86dc741c 322 Gene3D G3DSA:1.10.10.60 221 322 5.0E-29 T 12-10-2018 K04M3_43320 c2b552daa3fbbbd29fac498f86dc741c 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 316 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_43320 c2b552daa3fbbbd29fac498f86dc741c 322 Pfam PF12833 Helix-turn-helix domain 243 320 4.2E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_07400 8eb785e971d13faed9ef48f1ab702c83 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 1.6E-44 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 K04M3_07400 8eb785e971d13faed9ef48f1ab702c83 269 Pfam PF13371 Tetratricopeptide repeat 187 259 5.1E-24 T 12-10-2018 K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 Pfam PF00664 ABC transporter transmembrane region 174 416 1.4E-11 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 SMART SM00382 511 696 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 SUPERFAMILY SSF90123 160 464 3.53E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 Gene3D G3DSA:1.20.1560.10 160 470 2.7E-31 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 Pfam PF00005 ABC transporter 502 650 9.1E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 SUPERFAMILY SSF52540 463 709 1.23E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37430 e01537f1d8d029bf08529ce318ae789e 712 Gene3D G3DSA:3.40.50.300 474 712 8.7E-36 T 12-10-2018 K04M3_11570 b5bb12e6ba7912e0e671c34418822140 230 SUPERFAMILY SSF55120 2 199 1.26E-47 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_11570 b5bb12e6ba7912e0e671c34418822140 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_11570 b5bb12e6ba7912e0e671c34418822140 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.5E-108 T 12-10-2018 IPR006508 Pseudouridine synthase, RluA-like K04M3_11570 b5bb12e6ba7912e0e671c34418822140 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 4.1E-27 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_11570 b5bb12e6ba7912e0e671c34418822140 230 Gene3D G3DSA:3.30.2350.10 1 196 1.7E-48 T 12-10-2018 K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.2E-69 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 12-10-2018 K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 12-10-2018 K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.230.10 75 167 5.0E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_02800 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22590 d43c6c5d583fa1c8dccca14185c4ead3 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.3E-32 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 K04M3_16380 47b6a7feb4a50cad68bd053aa85c874d 157 Gene3D G3DSA:3.30.450.40 2 157 3.2E-63 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_16380 47b6a7feb4a50cad68bd053aa85c874d 157 SUPERFAMILY SSF55781 4 144 1.06E-39 T 12-10-2018 K04M3_16380 47b6a7feb4a50cad68bd053aa85c874d 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site K04M3_16380 47b6a7feb4a50cad68bd053aa85c874d 157 Pfam PF13185 GAF domain 41 142 7.0E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_20230 ba5295c5c3de35cddb9eb407dda761c9 268 SUPERFAMILY SSF51366 1 266 7.63E-92 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_20230 ba5295c5c3de35cddb9eb407dda761c9 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20230 ba5295c5c3de35cddb9eb407dda761c9 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.5E-100 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20230 ba5295c5c3de35cddb9eb407dda761c9 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.094 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20230 ba5295c5c3de35cddb9eb407dda761c9 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.5E-101 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 K04M3_20230 ba5295c5c3de35cddb9eb407dda761c9 268 Gene3D G3DSA:3.20.20.70 1 268 1.2E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_25450 60f2e061b088c4adfff27798cd45bd85 257 PIRSF PIRSF005902 1 257 7.0E-66 T 12-10-2018 IPR001130 TatD family GO:0016788 K04M3_25450 60f2e061b088c4adfff27798cd45bd85 257 Pfam PF01026 TatD related DNase 4 253 1.9E-64 T 12-10-2018 IPR001130 TatD family GO:0016788 K04M3_25450 60f2e061b088c4adfff27798cd45bd85 257 Gene3D G3DSA:3.20.20.140 1 256 6.3E-82 T 12-10-2018 K04M3_25450 60f2e061b088c4adfff27798cd45bd85 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 K04M3_25450 60f2e061b088c4adfff27798cd45bd85 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 K04M3_25450 60f2e061b088c4adfff27798cd45bd85 257 SUPERFAMILY SSF51556 1 255 7.49E-76 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_26950 1cbceb69f9614baa6718300946ad004b 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 5.8E-25 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase K04M3_26950 1cbceb69f9614baa6718300946ad004b 86 SUPERFAMILY SSF109910 2 79 1.83E-26 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily K04M3_26950 1cbceb69f9614baa6718300946ad004b 86 Gene3D G3DSA:1.10.150.250 1 86 1.2E-37 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily K04M3_36870 95248830b6a3152e5ea85872e63c4e50 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36870 95248830b6a3152e5ea85872e63c4e50 113 Gene3D G3DSA:1.10.10.10 10 108 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36870 95248830b6a3152e5ea85872e63c4e50 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36870 95248830b6a3152e5ea85872e63c4e50 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36870 95248830b6a3152e5ea85872e63c4e50 113 SMART SM00418 28 106 8.5E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_36870 95248830b6a3152e5ea85872e63c4e50 113 SUPERFAMILY SSF46785 16 104 2.02E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_44170 4ec7a4c5db0b1fe1a805c666198cb397 158 PIRSF PIRSF019239 1 158 6.9E-43 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 K04M3_44170 4ec7a4c5db0b1fe1a805c666198cb397 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 155 9.1E-39 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 K04M3_43220 f89a1fe416a9b96c410ca27a3f391db0 334 Gene3D G3DSA:3.40.50.2300 33 302 6.2E-118 T 12-10-2018 K04M3_43220 f89a1fe416a9b96c410ca27a3f391db0 334 Gene3D G3DSA:3.40.50.2300 140 326 6.2E-118 T 12-10-2018 K04M3_43220 f89a1fe416a9b96c410ca27a3f391db0 334 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 32 330 3.6E-131 T 12-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT K04M3_43220 f89a1fe416a9b96c410ca27a3f391db0 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 323 1.6E-32 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain K04M3_43220 f89a1fe416a9b96c410ca27a3f391db0 334 SUPERFAMILY SSF53822 32 296 2.16E-37 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 SUPERFAMILY SSF54631 151 278 1.09E-25 T 12-10-2018 K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Gene3D G3DSA:3.10.580.10 145 283 1.1E-30 T 12-10-2018 K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Gene3D G3DSA:2.60.120.10 1 144 1.2E-24 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 5.2E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Pfam PF00571 CBS domain 226 278 2.9E-9 T 12-10-2018 IPR000644 CBS domain K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Pfam PF00571 CBS domain 159 214 6.0E-7 T 12-10-2018 IPR000644 CBS domain K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 SMART SM00116 159 216 0.048 T 12-10-2018 IPR000644 CBS domain K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 SMART SM00116 233 280 8.7E-5 T 12-10-2018 IPR000644 CBS domain K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 5.5E-46 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 1.6E-46 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 SMART SM00100 17 134 8.5E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_19610 f095e9117e25a6c6c1858e8b50f71e20 629 SUPERFAMILY SSF51206 7 135 5.5E-29 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_28260 9577bcc6948db2c4a1b328fba36e5abf 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 2.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28260 9577bcc6948db2c4a1b328fba36e5abf 193 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28260 9577bcc6948db2c4a1b328fba36e5abf 193 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 4.8E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28260 9577bcc6948db2c4a1b328fba36e5abf 193 SUPERFAMILY SSF54523 7 76 5.18E-5 T 12-10-2018 K04M3_11010 39cf1d038fcf019161350456b9daf0e1 197 Pfam PF16036 Chalcone isomerase-like 68 194 2.0E-6 T 12-10-2018 IPR016087 Chalcone isomerase GO:0016872 K04M3_42020 4f801e1fedb29183f89a561afa900e40 262 SMART SM00052 12 255 4.5E-10 T 12-10-2018 IPR001633 EAL domain K04M3_42020 4f801e1fedb29183f89a561afa900e40 262 Gene3D G3DSA:3.20.20.450 16 257 1.5E-40 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_42020 4f801e1fedb29183f89a561afa900e40 262 Pfam PF00563 EAL domain 27 249 3.4E-40 T 12-10-2018 IPR001633 EAL domain K04M3_42020 4f801e1fedb29183f89a561afa900e40 262 SUPERFAMILY SSF141868 27 257 1.02E-39 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_27900 8f7c31c481c3a3eda0d24885d80df8ed 418 Gene3D G3DSA:3.65.10.10 22 229 1.1E-171 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 K04M3_27900 8f7c31c481c3a3eda0d24885d80df8ed 418 Gene3D G3DSA:3.65.10.10 12 414 1.1E-171 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 K04M3_27900 8f7c31c481c3a3eda0d24885d80df8ed 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.826 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_27900 8f7c31c481c3a3eda0d24885d80df8ed 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 9.2E-123 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 K04M3_27900 8f7c31c481c3a3eda0d24885d80df8ed 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.8E-182 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 K04M3_27900 8f7c31c481c3a3eda0d24885d80df8ed 418 SUPERFAMILY SSF55205 6 417 7.52E-142 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 K04M3_08070 fd62dceb5be8cf09e944b34bbb80fa0b 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 1.4E-72 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 K04M3_30460 9f2be4326b3a602ba3dba6a31e8220d5 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.5E-78 T 12-10-2018 IPR007338 Protein of unknown function DUF416 K04M3_30460 9f2be4326b3a602ba3dba6a31e8220d5 195 Gene3D G3DSA:1.20.1590.10 2 195 5.7E-68 T 12-10-2018 IPR023381 YP001051499.1-like domain superfamily K04M3_36590 93b60061119ce46af41998e622a9a8e9 179 Gene3D G3DSA:3.40.630.30 5 173 1.5E-51 T 12-10-2018 K04M3_36590 93b60061119ce46af41998e622a9a8e9 179 Pfam PF13302 Acetyltransferase (GNAT) domain 6 139 3.4E-21 T 12-10-2018 IPR000182 GNAT domain K04M3_36590 93b60061119ce46af41998e622a9a8e9 179 SUPERFAMILY SSF55729 4 164 1.92E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 1.3E-201 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 SUPERFAMILY SSF53720 18 473 3.14E-160 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 2.9E-164 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 Gene3D G3DSA:3.40.605.10 19 465 1.2E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_13720 45f2934788394bb26e49e594aa43e2eb 475 Gene3D G3DSA:3.40.309.10 255 442 1.2E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 1.3E-201 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 SUPERFAMILY SSF53720 18 473 3.14E-160 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 2.9E-164 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 Gene3D G3DSA:3.40.605.10 19 465 1.2E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_14080 45f2934788394bb26e49e594aa43e2eb 475 Gene3D G3DSA:3.40.309.10 255 442 1.2E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_31120 bd6558b510fb448ddf8725ee71b6bf85 405 Pfam PF07690 Major Facilitator Superfamily 18 339 7.2E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_31120 bd6558b510fb448ddf8725ee71b6bf85 405 Gene3D G3DSA:1.20.1250.20 8 201 2.2E-14 T 12-10-2018 K04M3_31120 bd6558b510fb448ddf8725ee71b6bf85 405 SUPERFAMILY SSF103473 9 399 1.96E-32 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_31120 bd6558b510fb448ddf8725ee71b6bf85 405 Gene3D G3DSA:1.20.1250.20 208 402 8.2E-12 T 12-10-2018 K04M3_42740 5e92f2133d8819154fac81895f03f2c4 159 Pfam PF04073 Aminoacyl-tRNA editing domain 34 141 2.2E-19 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 K04M3_42740 5e92f2133d8819154fac81895f03f2c4 159 Gene3D G3DSA:3.90.960.10 3 149 5.6E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_42740 5e92f2133d8819154fac81895f03f2c4 159 SUPERFAMILY SSF55826 5 147 2.75E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 SUPERFAMILY SSF53383 7 410 1.2E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 Gene3D G3DSA:3.40.640.10 54 313 2.8E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 Gene3D G3DSA:3.90.1150.10 5 405 2.8E-106 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 3.1E-149 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 Pfam PF00202 Aminotransferase class-III 15 409 7.1E-80 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 8.2E-206 T 12-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 PIRSF PIRSF000521 174 412 2.1E-31 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 PIRSF PIRSF000521 2 128 3.1E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_14680 5833243a0c5413df91deb8fd32e0eb26 421 PIRSF PIRSF000521 122 154 6.6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_05510 0b48effb490aa5136d2a1bf75a7fc4be 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_05510 0b48effb490aa5136d2a1bf75a7fc4be 272 SUPERFAMILY SSF52540 22 258 4.02E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05510 0b48effb490aa5136d2a1bf75a7fc4be 272 Pfam PF00005 ABC transporter 41 197 2.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_05510 0b48effb490aa5136d2a1bf75a7fc4be 272 SMART SM00382 50 252 9.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_05510 0b48effb490aa5136d2a1bf75a7fc4be 272 Gene3D G3DSA:3.40.50.300 21 269 7.8E-66 T 12-10-2018 K04M3_05510 0b48effb490aa5136d2a1bf75a7fc4be 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 3.8E-124 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 K04M3_00200 c17e8e59a178e019f21df6234db1fb75 207 SUPERFAMILY SSF54211 5 134 3.49E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_00200 c17e8e59a178e019f21df6234db1fb75 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.7E-11 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal K04M3_00200 c17e8e59a178e019f21df6234db1fb75 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 7.5E-66 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal K04M3_00200 c17e8e59a178e019f21df6234db1fb75 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.0E-25 T 12-10-2018 IPR001498 Impact, N-terminal K04M3_00200 c17e8e59a178e019f21df6234db1fb75 207 SUPERFAMILY SSF54980 139 204 4.03E-9 T 12-10-2018 IPR035647 EF-G domain III/V-like K04M3_00200 c17e8e59a178e019f21df6234db1fb75 207 Gene3D G3DSA:3.30.230.30 2 136 1.7E-49 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 Gene3D G3DSA:2.10.10.20 437 483 8.0E-15 T 12-10-2018 K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 SUPERFAMILY SSF51055 433 482 4.71E-16 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 Gene3D G3DSA:1.10.530.10 105 346 1.6E-76 T 12-10-2018 K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 SUPERFAMILY SSF53955 87 350 2.5E-53 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 Gene3D G3DSA:3.30.20.10 178 248 1.6E-76 T 12-10-2018 K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 Pfam PF00182 Chitinase class I 106 325 5.4E-30 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 SMART SM00495 522 567 1.5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_06070 704c722335e0cd1fc0748c36b79775fd 570 SMART SM00495 439 481 8.3E-17 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_25080 32343317948660d1f5fa1c6d33bff280 308 Gene3D G3DSA:3.40.190.290 94 296 2.4E-37 T 12-10-2018 K04M3_25080 32343317948660d1f5fa1c6d33bff280 308 SUPERFAMILY SSF46785 5 114 4.16E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_25080 32343317948660d1f5fa1c6d33bff280 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.2E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_25080 32343317948660d1f5fa1c6d33bff280 308 Pfam PF03466 LysR substrate binding domain 90 294 4.8E-49 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_25080 32343317948660d1f5fa1c6d33bff280 308 SUPERFAMILY SSF53850 92 296 4.62E-43 T 12-10-2018 K04M3_25080 32343317948660d1f5fa1c6d33bff280 308 Gene3D G3DSA:1.10.10.10 4 92 4.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_01520 ec49d31b4accfe092b07b8a20e81e1bc 453 PIRSF PIRSF037714 2 453 1.1E-173 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein K04M3_01520 ec49d31b4accfe092b07b8a20e81e1bc 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.4E-28 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 36 438 6.3E-155 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 33 439 42.961 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 SUPERFAMILY SSF54675 34 171 5.0E-34 T 12-10-2018 K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 SUPERFAMILY SSF51690 155 435 7.26E-86 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 Gene3D G3DSA:3.20.140.10 26 453 3.2E-161 T 12-10-2018 K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 204 438 6.4E-80 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 K04M3_46820 010a9eb29f005e024a3e1567064955d5 462 PIRSF PIRSF000484 27 422 7.7E-66 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 PIRSF PIRSF004848 1 233 1.2E-78 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 Gene3D G3DSA:3.20.20.10 1 233 4.1E-88 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 34.733 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 SUPERFAMILY SSF51419 1 228 2.88E-82 T 12-10-2018 IPR029066 PLP-binding barrel K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 5.3E-36 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 K04M3_27270 b0d69f8ab75ad6b939342e1090dcfd28 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.8E-89 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 K04M3_45360 19e342eac0a4469c2fc2e9d948e04e82 447 Pfam PF01554 MatE 22 182 3.1E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_45360 19e342eac0a4469c2fc2e9d948e04e82 447 Pfam PF01554 MatE 241 398 3.7E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_45360 19e342eac0a4469c2fc2e9d948e04e82 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 403 5.5E-46 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_45360 19e342eac0a4469c2fc2e9d948e04e82 447 PIRSF PIRSF006603 1 447 1.7E-83 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_04500 f436af599b41f4572678f5ee26dc9fab 119 PIRSF PIRSF026426 1 119 2.8E-43 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 K04M3_04500 f436af599b41f4572678f5ee26dc9fab 119 Pfam PF07386 Protein of unknown function (DUF1499) 7 112 5.7E-23 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 K04M3_12040 a424d43539e72835576b365120129fba 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site K04M3_12040 a424d43539e72835576b365120129fba 364 PIRSF PIRSF000525 2 364 1.0E-152 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 K04M3_12040 a424d43539e72835576b365120129fba 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 6.8E-161 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 K04M3_12040 a424d43539e72835576b365120129fba 364 Gene3D G3DSA:3.90.1150.10 262 364 8.6E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_12040 a424d43539e72835576b365120129fba 364 Pfam PF00266 Aminotransferase class-V 8 352 1.4E-63 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_12040 a424d43539e72835576b365120129fba 364 Gene3D G3DSA:3.40.640.10 21 261 8.9E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_12040 a424d43539e72835576b365120129fba 364 SUPERFAMILY SSF53383 7 362 4.1E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_12040 a424d43539e72835576b365120129fba 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.162 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 K04M3_39030 0168488ea39c850ffba3c120feb7e9aa 231 Gene3D G3DSA:3.40.1730.10 8 230 1.0E-58 T 12-10-2018 IPR038225 T6S-associated protein TagF superfamily K04M3_39030 0168488ea39c850ffba3c120feb7e9aa 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 2.4E-43 T 12-10-2018 IPR017748 T6S-associated protein TagF K04M3_39030 0168488ea39c850ffba3c120feb7e9aa 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 139 5.3E-38 T 12-10-2018 IPR017748 T6S-associated protein TagF K04M3_39030 0168488ea39c850ffba3c120feb7e9aa 231 PIRSF PIRSF029287 3 229 2.2E-30 T 12-10-2018 IPR017748 T6S-associated protein TagF K04M3_25510 e4c60a272e5e5a83b724e39c9d7e0c64 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 8.9E-10 T 12-10-2018 K04M3_25510 e4c60a272e5e5a83b724e39c9d7e0c64 167 Gene3D G3DSA:3.40.630.30 1 167 3.6E-46 T 12-10-2018 K04M3_25510 e4c60a272e5e5a83b724e39c9d7e0c64 167 SUPERFAMILY SSF55729 1 130 9.12E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_02460 91f3b8cb6c981dfbd9ee0779bb222da9 448 PIRSF PIRSF005348 2 447 3.6E-159 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 K04M3_02460 91f3b8cb6c981dfbd9ee0779bb222da9 448 Pfam PF03390 2-hydroxycarboxylate transporter family 25 441 4.3E-150 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 K04M3_51310 7b4920f04f158b6ece8beb9c9d8b5562 233 Pfam PF09904 Winged helix-turn helix 7 89 1.8E-29 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 K04M3_51310 7b4920f04f158b6ece8beb9c9d8b5562 233 Gene3D G3DSA:1.10.10.10 1 103 9.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_33620 35f7c8bbbc8df656cd8efeb5587dd1eb 148 Gene3D G3DSA:1.10.260.40 3 63 1.9E-5 T 12-10-2018 K04M3_33620 35f7c8bbbc8df656cd8efeb5587dd1eb 148 SUPERFAMILY SSF47413 8 47 1.13E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_27230 8b9e4ec869732c360cd77c81cad08359 189 Pfam PF02622 Uncharacterized ACR, COG1678 14 176 9.3E-51 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 K04M3_27230 8b9e4ec869732c360cd77c81cad08359 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 3 189 39.241 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 K04M3_27230 8b9e4ec869732c360cd77c81cad08359 189 SUPERFAMILY SSF143456 3 189 1.83E-67 T 12-10-2018 K04M3_27230 8b9e4ec869732c360cd77c81cad08359 189 Gene3D G3DSA:3.40.1740.10 1 189 3.1E-69 T 12-10-2018 K04M3_08320 4d14364f0258fc734380a07585112f68 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_08320 4d14364f0258fc734380a07585112f68 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_08320 4d14364f0258fc734380a07585112f68 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_08320 4d14364f0258fc734380a07585112f68 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.8E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 K04M3_08320 4d14364f0258fc734380a07585112f68 255 Gene3D G3DSA:3.40.50.1820 3 254 1.9E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_08320 4d14364f0258fc734380a07585112f68 255 SUPERFAMILY SSF53474 5 254 3.06E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_08320 4d14364f0258fc734380a07585112f68 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 6.5E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_38380 e6a4cd8442b3820270e2594c9049bcb5 486 Gene3D G3DSA:3.40.605.10 19 476 5.9E-148 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_38380 e6a4cd8442b3820270e2594c9049bcb5 486 Pfam PF00171 Aldehyde dehydrogenase family 24 480 2.5E-149 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_38380 e6a4cd8442b3820270e2594c9049bcb5 486 SUPERFAMILY SSF53720 6 484 2.09E-148 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_38380 e6a4cd8442b3820270e2594c9049bcb5 486 Gene3D G3DSA:3.40.309.10 260 452 5.9E-148 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 Gene3D G3DSA:3.30.450.90 152 288 2.3E-46 T 12-10-2018 K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 143 2.5E-16 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 SUPERFAMILY SSF52540 173 558 8.5E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 Pfam PF00437 Type II/IV secretion system protein 188 455 4.7E-87 T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 Gene3D G3DSA:3.40.50.300 290 560 6.8E-103 T 12-10-2018 K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 1.1E-237 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 SUPERFAMILY SSF160246 2 140 4.18E-31 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 12-10-2018 IPR001482 Type II/IV secretion system protein K04M3_26280 ab8d6c020f3962eaee9be1142586c362 561 Gene3D G3DSA:3.30.300.160 63 140 4.2E-8 T 12-10-2018 K04M3_48490 0630b0312f7c5c2e2b21e0cc93754632 199 SUPERFAMILY SSF75217 1 198 9.55E-68 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_48490 0630b0312f7c5c2e2b21e0cc93754632 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 28.034 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 K04M3_48490 0630b0312f7c5c2e2b21e0cc93754632 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 2.2E-66 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 K04M3_48490 0630b0312f7c5c2e2b21e0cc93754632 199 Gene3D G3DSA:3.40.1280.10 1 199 6.5E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_17370 e0090aed98e94cefd69c6f71a4733749 298 SUPERFAMILY SSF103481 199 294 2.35E-9 T 12-10-2018 K04M3_17370 e0090aed98e94cefd69c6f71a4733749 298 SUPERFAMILY SSF103481 71 148 6.54E-5 T 12-10-2018 K04M3_17370 e0090aed98e94cefd69c6f71a4733749 298 Pfam PF00892 EamA-like transporter family 11 145 5.0E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_17370 e0090aed98e94cefd69c6f71a4733749 298 Pfam PF00892 EamA-like transporter family 161 294 3.6E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_17910 2e10892240c30a79e108768f16622e65 568 Pfam PF17243 POTRA domain TamA domain 1 27 93 8.1E-8 T 12-10-2018 IPR035243 TamA, POTRA domain 1 K04M3_17910 2e10892240c30a79e108768f16622e65 568 Gene3D G3DSA:3.10.20.310 24 95 7.4E-7 T 12-10-2018 K04M3_17910 2e10892240c30a79e108768f16622e65 568 Gene3D G3DSA:3.10.20.310 97 183 2.4E-25 T 12-10-2018 K04M3_17910 2e10892240c30a79e108768f16622e65 568 Gene3D G3DSA:3.10.20.310 184 260 1.5E-14 T 12-10-2018 K04M3_17910 2e10892240c30a79e108768f16622e65 568 Pfam PF01103 Surface antigen 264 568 2.1E-25 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 K04M3_17910 2e10892240c30a79e108768f16622e65 568 Gene3D G3DSA:2.40.160.50 261 568 1.7E-81 T 12-10-2018 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 60 1.4E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.362 T 12-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 Gene3D G3DSA:3.40.190.290 89 296 8.4E-64 T 12-10-2018 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 Gene3D G3DSA:1.10.10.10 2 85 6.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 SUPERFAMILY SSF53850 94 295 6.88E-22 T 12-10-2018 K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 9.1E-106 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 Pfam PF03466 LysR substrate binding domain 95 271 3.5E-15 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_27070 fcffec474b61cee8e33125fe438139c7 298 SUPERFAMILY SSF46785 4 112 4.63E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_11040 a7fbadf53d67284e67d5b9298cc1949c 205 SUPERFAMILY SSF101322 2 204 9.29E-80 T 12-10-2018 IPR035932 HflD-like superfamily K04M3_11040 a7fbadf53d67284e67d5b9298cc1949c 205 Gene3D G3DSA:1.10.3890.10 1 205 2.1E-77 T 12-10-2018 IPR035932 HflD-like superfamily K04M3_11040 a7fbadf53d67284e67d5b9298cc1949c 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 1.0E-102 T 12-10-2018 K04M3_11040 a7fbadf53d67284e67d5b9298cc1949c 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.2E-76 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD K04M3_11040 a7fbadf53d67284e67d5b9298cc1949c 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.903 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD K04M3_22750 daa6f63047dac1b4f453145c2556e146 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 253 4.1E-73 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 K04M3_22750 daa6f63047dac1b4f453145c2556e146 260 Pfam PF01311 Bacterial export proteins, family 1 13 245 5.3E-56 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_22750 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.0E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_22750 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.0E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_22750 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.0E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_22750 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.0E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.737 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 SUPERFAMILY SSF53098 3 156 3.54E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 8.6E-76 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 Gene3D G3DSA:3.30.420.10 2 159 1.4E-52 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.8E-63 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 K04M3_10360 90df06a3edb9e01e7be0940ead3e10b7 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 1.7E-62 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 Gene3D G3DSA:3.40.50.1980 180 293 1.2E-41 T 12-10-2018 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00690 Adhesin family signature 63 80 1.6E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00690 Adhesin family signature 50 63 1.6E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00690 Adhesin family signature 179 200 1.6E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 Gene3D G3DSA:3.40.50.1980 21 179 6.6E-50 T 12-10-2018 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 SUPERFAMILY SSF53807 12 291 2.26E-79 T 12-10-2018 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00691 Adhesin B signature 63 82 5.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00691 Adhesin B signature 123 142 5.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00691 Adhesin B signature 179 196 5.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_08480 fbfb378123b7f3c315c225eb07143550 295 PRINTS PR00691 Adhesin B signature 44 62 5.9E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 K04M3_22790 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_22790 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_22790 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_22790 4ca3547173c506447e122809e03eaf13 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_22790 4ca3547173c506447e122809e03eaf13 136 Gene3D G3DSA:2.30.330.10 43 136 2.9E-34 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_22790 4ca3547173c506447e122809e03eaf13 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 K04M3_22790 4ca3547173c506447e122809e03eaf13 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) K04M3_22790 4ca3547173c506447e122809e03eaf13 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_13080 d699119becd703666dfa0e87d12b41f6 177 Gene3D G3DSA:3.40.50.300 3 176 1.1E-57 T 12-10-2018 K04M3_13080 d699119becd703666dfa0e87d12b41f6 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 3.5E-59 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 K04M3_13080 d699119becd703666dfa0e87d12b41f6 177 SUPERFAMILY SSF52540 4 176 7.41E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_13080 d699119becd703666dfa0e87d12b41f6 177 PIRSF PIRSF006135 1 177 3.0E-54 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 K04M3_33210 233a5c1d92c6071eafce895122689a5a 678 Gene3D G3DSA:2.170.130.10 48 173 5.2E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_33210 233a5c1d92c6071eafce895122689a5a 678 SUPERFAMILY SSF56935 33 678 3.0E-125 T 12-10-2018 K04M3_33210 233a5c1d92c6071eafce895122689a5a 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 4.7E-22 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_33210 233a5c1d92c6071eafce895122689a5a 678 Pfam PF00593 TonB dependent receptor 269 676 2.0E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_33210 233a5c1d92c6071eafce895122689a5a 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 2.4E-91 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_33210 233a5c1d92c6071eafce895122689a5a 678 Gene3D G3DSA:2.40.170.20 174 678 3.2E-98 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_30990 36015f05572eb46012147707587bda75 106 Pfam PF00581 Rhodanese-like domain 13 98 1.8E-11 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_30990 36015f05572eb46012147707587bda75 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.882 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 K04M3_30990 36015f05572eb46012147707587bda75 106 Gene3D G3DSA:3.40.250.10 1 101 5.2E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_30990 36015f05572eb46012147707587bda75 106 SUPERFAMILY SSF52821 1 105 1.57E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_30990 36015f05572eb46012147707587bda75 106 SMART SM00450 7 102 1.8E-18 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_36340 bdbf3c1b5f887894888a317dfb0ae3ec 319 Gene3D G3DSA:3.90.25.10 169 307 4.4E-101 T 12-10-2018 K04M3_36340 bdbf3c1b5f887894888a317dfb0ae3ec 319 Gene3D G3DSA:3.40.50.720 8 298 4.4E-101 T 12-10-2018 K04M3_36340 bdbf3c1b5f887894888a317dfb0ae3ec 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 197 2.4E-24 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 K04M3_36340 bdbf3c1b5f887894888a317dfb0ae3ec 319 SUPERFAMILY SSF51735 2 311 5.21E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_44060 eae497ddc52d0afad696cdc13214fd5f 650 SUPERFAMILY SSF56801 12 606 1.57E-99 T 12-10-2018 K04M3_44060 eae497ddc52d0afad696cdc13214fd5f 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_44060 eae497ddc52d0afad696cdc13214fd5f 650 Pfam PF00501 AMP-binding enzyme 21 471 1.1E-74 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_44060 eae497ddc52d0afad696cdc13214fd5f 650 Gene3D G3DSA:3.40.50.12780 8 319 5.3E-38 T 12-10-2018 K04M3_44060 eae497ddc52d0afad696cdc13214fd5f 650 Gene3D G3DSA:3.40.50.12780 328 467 8.7E-33 T 12-10-2018 K04M3_37670 c03b4a9033e51b9950dd8ac01098bb4d 114 Gene3D G3DSA:3.20.160.10 1 114 2.6E-52 T 12-10-2018 IPR038604 Type III effector HopJ superfamily K04M3_37670 c03b4a9033e51b9950dd8ac01098bb4d 114 Pfam PF08888 HopJ type III effector protein 4 111 1.6E-49 T 12-10-2018 IPR014984 HopJ type III effector protein K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PIRSF PIRSF002764 1 222 5.8E-84 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.1E-91 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 7.3E-70 T 12-10-2018 K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 7.3E-70 T 12-10-2018 K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 7.3E-70 T 12-10-2018 K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 7.3E-70 T 12-10-2018 K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 7.3E-70 T 12-10-2018 K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 7.3E-70 T 12-10-2018 K04M3_22600 9ab0d8b4effaaa54a206d57f9360a3c5 222 Pfam PF03379 CcmB protein 5 219 9.1E-90 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_02920 57825914fe8756580306c3818a17e89b 198 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 6.2E-7 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal K04M3_02920 57825914fe8756580306c3818a17e89b 198 Gene3D G3DSA:3.10.450.350 102 194 1.1E-14 T 12-10-2018 K04M3_02920 57825914fe8756580306c3818a17e89b 198 Pfam PF04225 Opacity-associated protein A LysM-like domain 114 198 8.7E-38 T 12-10-2018 IPR007340 Opacity-associated protein A K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Pfam PF01493 GXGXG motif 1267 1452 1.5E-83 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 6.4E-151 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 SUPERFAMILY SSF51395 452 1221 4.89E-268 T 12-10-2018 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Pfam PF04898 Glutamate synthase central domain 472 756 5.3E-117 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 SUPERFAMILY SSF69336 1235 1498 3.14E-95 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 SUPERFAMILY SSF56235 21 447 7.72E-153 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Gene3D G3DSA:2.160.20.60 1239 1510 3.1E-109 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 K04M3_04540 4bb76b13fc97e857d729760c713aad50 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.7E-185 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain K04M3_39670 462c986c6c267d8d554d17438372726a 940 Pfam PF03906 Phage T7 tail fibre protein 19 166 4.0E-21 T 12-10-2018 IPR005604 Bacteriophage T7 tail fibre protein K04M3_08990 23795b622ed613c22471f4daaa1e3331 220 SUPERFAMILY SSF51735 6 136 6.26E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08990 23795b622ed613c22471f4daaa1e3331 220 Pfam PF02254 TrkA-N domain 8 123 7.0E-28 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_08990 23795b622ed613c22471f4daaa1e3331 220 Pfam PF02080 TrkA-C domain 154 214 3.6E-10 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_08990 23795b622ed613c22471f4daaa1e3331 220 Gene3D G3DSA:3.40.50.720 2 140 8.2E-35 T 12-10-2018 K04M3_08990 23795b622ed613c22471f4daaa1e3331 220 Gene3D G3DSA:3.30.70.1450 141 217 6.7E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_08990 23795b622ed613c22471f4daaa1e3331 220 SUPERFAMILY SSF116726 134 216 1.07E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_10010 e4ea02c076eee790df7b544db1b667fc 233 Gene3D G3DSA:3.30.70.1560 122 221 1.3E-39 T 12-10-2018 K04M3_10010 e4ea02c076eee790df7b544db1b667fc 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 93 107 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_10010 e4ea02c076eee790df7b544db1b667fc 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 62 232 5.7E-59 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_10010 e4ea02c076eee790df7b544db1b667fc 233 SUPERFAMILY SSF55120 47 232 2.24E-46 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_10010 e4ea02c076eee790df7b544db1b667fc 233 Pfam PF00849 RNA pseudouridylate synthase 58 202 4.3E-16 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_10010 e4ea02c076eee790df7b544db1b667fc 233 Gene3D G3DSA:3.30.70.580 46 121 2.1E-26 T 12-10-2018 K04M3_39100 90d4b7bea4e585751ab1d32c0e7c40ba 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 144 5.1E-32 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein K04M3_39100 90d4b7bea4e585751ab1d32c0e7c40ba 154 Pfam PF04965 Gene 25-like lysozyme 31 130 2.7E-17 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD K04M3_39100 90d4b7bea4e585751ab1d32c0e7c40ba 154 SUPERFAMILY SSF160719 33 141 6.93E-8 T 12-10-2018 K04M3_34560 eb0e43c05d4958c905b11da0dfcf7f0a 272 SUPERFAMILY SSF101801 198 262 1.44E-9 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_34560 eb0e43c05d4958c905b11da0dfcf7f0a 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 4.4E-11 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) K04M3_25490 9b763ad20578f940beeeeadc718e1cf5 133 SUPERFAMILY SSF102220 33 132 4.05E-28 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_25490 9b763ad20578f940beeeeadc718e1cf5 133 PIRSF PIRSF029225 2 133 2.1E-43 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_25490 9b763ad20578f940beeeeadc718e1cf5 133 Pfam PF03603 DNA polymerase III psi subunit 4 130 6.2E-38 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_25490 9b763ad20578f940beeeeadc718e1cf5 133 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 56 128 7.0E-6 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_25490 9b763ad20578f940beeeeadc718e1cf5 133 Gene3D G3DSA:3.40.50.10220 35 133 4.1E-30 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_12400 21a4de2d946817a85eab8a4aad1692b4 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.677 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 K04M3_12400 21a4de2d946817a85eab8a4aad1692b4 105 Pfam PF01906 Putative heavy-metal-binding 1 103 1.3E-38 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 K04M3_12400 21a4de2d946817a85eab8a4aad1692b4 105 Gene3D G3DSA:3.30.110.70 1 105 1.2E-32 T 12-10-2018 K04M3_12400 21a4de2d946817a85eab8a4aad1692b4 105 SUPERFAMILY SSF117782 1 104 3.53E-37 T 12-10-2018 IPR035439 UPF0145 domain superfamily K04M3_24080 306abaea8db8630644b473249a311838 168 Gene3D G3DSA:3.40.630.30 3 161 3.2E-26 T 12-10-2018 K04M3_24080 306abaea8db8630644b473249a311838 168 SUPERFAMILY SSF55729 3 147 1.9E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_24080 306abaea8db8630644b473249a311838 168 Pfam PF13302 Acetyltransferase (GNAT) domain 34 139 5.3E-20 T 12-10-2018 IPR000182 GNAT domain K04M3_42430 93dda16419c8b4332817e5a75271e55d 246 SMART SM00342 165 241 6.2E-6 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_42430 93dda16419c8b4332817e5a75271e55d 246 Pfam PF12833 Helix-turn-helix domain 169 242 5.9E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_42430 93dda16419c8b4332817e5a75271e55d 246 Gene3D G3DSA:1.10.10.60 143 245 5.4E-19 T 12-10-2018 K04M3_42430 93dda16419c8b4332817e5a75271e55d 246 SUPERFAMILY SSF46689 194 243 1.93E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_45740 d833864ed84f2431bfa225b57df39c78 551 SUPERFAMILY SSF53649 348 534 2.99E-17 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_45740 d833864ed84f2431bfa225b57df39c78 551 Gene3D G3DSA:3.40.720.10 217 551 4.8E-83 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_45740 d833864ed84f2431bfa225b57df39c78 551 Pfam PF08019 Domain of unknown function (DUF1705) 59 211 1.3E-48 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 K04M3_45740 d833864ed84f2431bfa225b57df39c78 551 Pfam PF00884 Sulfatase 242 532 1.6E-42 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 5.1E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 6.4E-27 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 SUPERFAMILY SSF53686 16 366 1.83E-106 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 5.0E-83 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 SUPERFAMILY SSF55021 421 514 7.1E-27 T 12-10-2018 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 SUPERFAMILY SSF55021 338 424 2.52E-27 T 12-10-2018 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 Gene3D G3DSA:3.40.1020.10 339 515 7.6E-72 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 Gene3D G3DSA:3.40.50.1100 62 158 1.8E-133 T 12-10-2018 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 8.4E-250 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 K04M3_32150 7f96aa720c8c100b7b79ceed52ffe238 515 Gene3D G3DSA:3.40.50.1100 26 328 1.8E-133 T 12-10-2018 K04M3_19870 af9be380e2e0e0529caa0df1dd5e3c8d 200 SUPERFAMILY SSF48695 5 191 2.84E-26 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_19870 af9be380e2e0e0529caa0df1dd5e3c8d 200 Gene3D G3DSA:3.90.10.10 141 198 3.6E-6 T 12-10-2018 K04M3_19870 af9be380e2e0e0529caa0df1dd5e3c8d 200 Gene3D G3DSA:3.90.10.10 39 140 6.4E-6 T 12-10-2018 K04M3_19870 af9be380e2e0e0529caa0df1dd5e3c8d 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 6.6E-62 T 12-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 K04M3_19870 af9be380e2e0e0529caa0df1dd5e3c8d 200 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 1.0E-4 T 12-10-2018 IPR010177 Doubled CXXCH motif K04M3_06610 f2046fb0f29595da3100024846804c41 155 Pfam PF01029 NusB family 11 149 1.9E-35 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 K04M3_06610 f2046fb0f29595da3100024846804c41 155 SUPERFAMILY SSF48013 7 153 4.97E-39 T 12-10-2018 IPR035926 NusB-like superfamily K04M3_06610 f2046fb0f29595da3100024846804c41 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.117 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 K04M3_06610 f2046fb0f29595da3100024846804c41 155 Gene3D G3DSA:1.10.940.10 3 155 5.4E-48 T 12-10-2018 IPR035926 NusB-like superfamily K04M3_06610 f2046fb0f29595da3100024846804c41 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 151 2.9E-43 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 Pfam PF00085 Thioredoxin 6 109 1.2E-15 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 Gene3D G3DSA:1.25.40.10 112 196 1.6E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.7E-28 T 12-10-2018 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 SUPERFAMILY SSF69103 112 192 5.49E-5 T 12-10-2018 IPR036743 Actin-related protein 2/3 complex subunit 5 superfamily GO:0005885|GO:0015629|GO:0030833|GO:0034314 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 Pfam PF14559 Tetratricopeptide repeat 124 190 4.7E-13 T 12-10-2018 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 Gene3D G3DSA:1.25.40.10 197 284 9.2E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 Gene3D G3DSA:3.40.30.10 2 111 5.3E-22 T 12-10-2018 K04M3_08040 1516d1f428c92cb2e618144fadc00526 284 SUPERFAMILY SSF52833 3 113 1.65E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_18170 22ecf804660a12c141368ba6029d9d70 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.1E-15 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM K04M3_18170 22ecf804660a12c141368ba6029d9d70 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 12-10-2018 K04M3_18170 22ecf804660a12c141368ba6029d9d70 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 12-10-2018 K04M3_18170 22ecf804660a12c141368ba6029d9d70 85 SUPERFAMILY SSF143120 1 75 6.98E-17 T 12-10-2018 IPR036165 YefM-like superfamily K04M3_26200 d9eed71763ee51e4972189c38cc6f3c1 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_26200 d9eed71763ee51e4972189c38cc6f3c1 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_26200 d9eed71763ee51e4972189c38cc6f3c1 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_26200 d9eed71763ee51e4972189c38cc6f3c1 204 SUPERFAMILY SSF46689 8 84 7.98E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_26200 d9eed71763ee51e4972189c38cc6f3c1 204 Gene3D G3DSA:1.10.357.10 1 204 2.0E-87 T 12-10-2018 K04M3_26200 d9eed71763ee51e4972189c38cc6f3c1 204 SUPERFAMILY SSF48498 89 197 5.34E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_38440 0c6d8c2d059d944e67100e7e3973998c 331 SUPERFAMILY SSF53850 22 326 1.47E-63 T 12-10-2018 K04M3_38440 0c6d8c2d059d944e67100e7e3973998c 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 303 5.1E-55 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 K04M3_38440 0c6d8c2d059d944e67100e7e3973998c 331 Gene3D G3DSA:3.40.190.10 28 319 2.7E-32 T 12-10-2018 K04M3_38440 0c6d8c2d059d944e67100e7e3973998c 331 Gene3D G3DSA:3.40.190.100 112 245 2.7E-32 T 12-10-2018 K04M3_23660 d1f399ce3acf4b95fcbc8ea598197458 281 Gene3D G3DSA:3.60.20.10 1 259 1.4E-99 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_23660 d1f399ce3acf4b95fcbc8ea598197458 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 4.4E-114 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 K04M3_23660 d1f399ce3acf4b95fcbc8ea598197458 281 SUPERFAMILY SSF56235 2 253 1.06E-50 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_30410 023f27311e9c73a0d548221486efdda4 536 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 536 3.6E-259 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 467 1.1E-118 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 SUPERFAMILY SSF53927 228 536 1.6E-130 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 Gene3D G3DSA:3.40.50.1380 1 200 2.0E-87 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily K04M3_30410 023f27311e9c73a0d548221486efdda4 536 SMART SM00851 19 132 1.9E-61 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain K04M3_30410 023f27311e9c73a0d548221486efdda4 536 SUPERFAMILY SSF52335 7 197 1.57E-71 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily K04M3_30410 023f27311e9c73a0d548221486efdda4 536 PIRSF PIRSF000414 1 536 1.7E-227 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 536 45.829 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 Gene3D G3DSA:3.40.140.20 225 381 5.0E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 SMART SM00798 137 468 2.4E-216 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 Gene3D G3DSA:3.40.140.20 400 536 1.5E-60 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_30410 023f27311e9c73a0d548221486efdda4 536 Pfam PF02142 MGS-like domain 19 132 4.6E-31 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain K04M3_29550 1181a8fc522915435214fa2e1604de3d 154 SUPERFAMILY SSF52540 27 151 7.14E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29550 1181a8fc522915435214fa2e1604de3d 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 4.2E-53 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 K04M3_29550 1181a8fc522915435214fa2e1604de3d 154 Gene3D G3DSA:3.40.50.300 2 153 3.5E-49 T 12-10-2018 K04M3_29550 1181a8fc522915435214fa2e1604de3d 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 4.1E-43 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 Pfam PF00571 CBS domain 278 325 2.7E-5 T 12-10-2018 IPR000644 CBS domain K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 Gene3D G3DSA:3.30.465.10 340 418 9.6E-26 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 Pfam PF01595 Domain of unknown function DUF21 13 181 9.8E-50 T 12-10-2018 IPR002550 CNNM, transmembrane domain K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 Pfam PF03471 Transporter associated domain 344 418 1.4E-16 T 12-10-2018 IPR005170 Transporter-associated domain K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 Gene3D G3DSA:3.10.580.10 201 330 1.3E-40 T 12-10-2018 K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 SUPERFAMILY SSF54631 192 329 3.92E-24 T 12-10-2018 K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 SMART SM01091 342 420 9.5E-23 T 12-10-2018 IPR005170 Transporter-associated domain K04M3_26400 a07bb4ef10bba6bfabc8b5712669fee7 426 SUPERFAMILY SSF56176 340 423 1.23E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_21380 6cdf77fdcde469cf5285582ed807f48b 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.92 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 K04M3_21380 6cdf77fdcde469cf5285582ed807f48b 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 1.4E-58 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 K04M3_05920 7254a573b3f891eeb70794d6f625b5bd 402 Gene3D G3DSA:1.10.150.130 102 194 8.6E-16 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_05920 7254a573b3f891eeb70794d6f625b5bd 402 Gene3D G3DSA:1.10.443.10 200 386 3.2E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_05920 7254a573b3f891eeb70794d6f625b5bd 402 Pfam PF13356 Arm DNA-binding domain 2 88 1.0E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain K04M3_05920 7254a573b3f891eeb70794d6f625b5bd 402 Pfam PF00589 Phage integrase family 203 373 6.4E-23 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_05920 7254a573b3f891eeb70794d6f625b5bd 402 SUPERFAMILY SSF56349 98 383 5.0E-61 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_05920 7254a573b3f891eeb70794d6f625b5bd 402 Gene3D G3DSA:3.30.160.390 1 101 3.0E-26 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 SMART SM00437 284 563 1.3E-89 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 SUPERFAMILY SSF56712 3 611 3.66E-184 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.8E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.8E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.8E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.8E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.8E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Gene3D G3DSA:2.70.20.10 218 493 7.0E-166 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 64.778 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Pfam PF01751 Toprim domain 4 125 1.3E-16 T 12-10-2018 IPR006171 TOPRIM domain K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 SMART SM00436 129 224 1.2E-32 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Gene3D G3DSA:3.40.50.140 2 157 4.2E-61 T 12-10-2018 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 SMART SM00493 2 125 3.6E-28 T 12-10-2018 IPR006171 TOPRIM domain K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Gene3D G3DSA:1.10.460.10 163 606 7.0E-166 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Gene3D G3DSA:1.10.290.10 293 422 7.0E-166 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 Pfam PF01131 DNA topoisomerase 159 598 1.4E-115 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 K04M3_21920 7c6ad616f0d2391cd98f15b9eb94984c 653 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 642 2.1E-239 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 K04M3_32440 d13485bbdf8925bd94fb77cf667332dd 324 SUPERFAMILY SSF110849 72 150 2.12E-8 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily K04M3_32440 d13485bbdf8925bd94fb77cf667332dd 324 SUPERFAMILY SSF109709 152 240 2.75E-5 T 12-10-2018 K04M3_32440 d13485bbdf8925bd94fb77cf667332dd 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 69 227 1.6E-21 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 K04M3_32440 d13485bbdf8925bd94fb77cf667332dd 324 SMART SM00470 58 149 2.5E-5 T 12-10-2018 IPR003115 ParB/Sulfiredoxin K04M3_32440 d13485bbdf8925bd94fb77cf667332dd 324 Pfam PF02195 ParB-like nuclease domain 78 145 1.7E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin K04M3_32440 d13485bbdf8925bd94fb77cf667332dd 324 Gene3D G3DSA:1.10.10.2830 153 273 2.3E-15 T 12-10-2018 K04M3_15390 6229c676e48a14d6ae3e832e64f5e0fe 212 Pfam PF02397 Bacterial sugar transferase 14 207 4.1E-62 T 12-10-2018 IPR003362 Bacterial sugar transferase K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 Gene3D G3DSA:3.10.410.10 469 558 1.1E-29 T 12-10-2018 K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.333 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.6E-238 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 Gene3D G3DSA:3.30.1510.10 129 264 5.3E-188 T 12-10-2018 K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 SUPERFAMILY SSF52540 4 580 1.21E-214 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 Gene3D G3DSA:3.40.50.300 4 454 5.3E-188 T 12-10-2018 K04M3_42110 f9e0061e018370febf8ca9867b458c41 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 Pfam PF00367 phosphotransferase system, EIIB 413 446 4.2E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 Gene3D G3DSA:3.30.1360.60 406 487 7.7E-26 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 482 9.5E-216 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 SUPERFAMILY SSF55604 410 484 3.27E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 7.6E-21 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 K04M3_08260 837206076de4c4bbe863ba71a60791f1 497 Pfam PF02378 Phosphotransferase system, EIIC 11 324 1.5E-77 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_33480 33989e800635a818504e973683c36aa4 237 Pfam PF12146 Serine aminopeptidase, S33 46 219 2.0E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 K04M3_33480 33989e800635a818504e973683c36aa4 237 SUPERFAMILY SSF53474 7 233 4.69E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_33480 33989e800635a818504e973683c36aa4 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 2.8E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_33480 33989e800635a818504e973683c36aa4 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 2.8E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_33480 33989e800635a818504e973683c36aa4 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 74 2.8E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_33480 33989e800635a818504e973683c36aa4 237 Gene3D G3DSA:3.40.50.1820 2 235 3.5E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_09190 bc15e59fdeefcf386d0515ef5f81054e 204 SMART SM01144 1 193 1.3E-69 T 12-10-2018 IPR005636 DTW K04M3_09190 bc15e59fdeefcf386d0515ef5f81054e 204 Pfam PF03942 DTW domain 3 188 3.0E-48 T 12-10-2018 IPR005636 DTW K04M3_44880 324b9b6d363f863937057a1f41675814 333 Gene3D G3DSA:3.40.50.1360 60 325 2.9E-80 T 12-10-2018 K04M3_44880 324b9b6d363f863937057a1f41675814 333 SUPERFAMILY SSF100950 70 320 3.6E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_44880 324b9b6d363f863937057a1f41675814 333 Pfam PF04198 Putative sugar-binding domain 66 320 2.1E-77 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 K04M3_44880 324b9b6d363f863937057a1f41675814 333 Gene3D G3DSA:1.10.10.60 9 59 2.9E-18 T 12-10-2018 K04M3_17530 6d4f18176c25522a763cca468db67305 624 Pfam PF03958 Bacterial type II/III secretion system short domain 189 293 2.0E-15 T 12-10-2018 IPR005644 NolW-like K04M3_17530 6d4f18176c25522a763cca468db67305 624 Gene3D G3DSA:3.30.1370.120 188 293 1.4E-9 T 12-10-2018 IPR038591 NolW-like superfamily K04M3_17530 6d4f18176c25522a763cca468db67305 624 Gene3D G3DSA:3.55.50.30 28 112 2.1E-29 T 12-10-2018 K04M3_17530 6d4f18176c25522a763cca468db67305 624 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 473 506 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 K04M3_17530 6d4f18176c25522a763cca468db67305 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 506 525 2.4E-38 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 K04M3_17530 6d4f18176c25522a763cca468db67305 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 296 316 2.4E-38 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 K04M3_17530 6d4f18176c25522a763cca468db67305 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 201 218 2.4E-38 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 K04M3_17530 6d4f18176c25522a763cca468db67305 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 414 429 2.4E-38 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 K04M3_17530 6d4f18176c25522a763cca468db67305 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 380 399 2.4E-38 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 K04M3_17530 6d4f18176c25522a763cca468db67305 624 Pfam PF00263 Bacterial type II and III secretion system protein 367 527 2.2E-36 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 K04M3_17530 6d4f18176c25522a763cca468db67305 624 Gene3D G3DSA:3.30.1370.120 113 181 2.3E-13 T 12-10-2018 IPR038591 NolW-like superfamily K04M3_17530 6d4f18176c25522a763cca468db67305 624 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 41 528 4.6E-153 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 K04M3_38590 6386c3684c1b67af42af8103be7f74b4 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 1.5E-135 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 K04M3_38590 6386c3684c1b67af42af8103be7f74b4 364 SUPERFAMILY SSF52518 22 357 2.03E-92 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_38590 6386c3684c1b67af42af8103be7f74b4 364 Gene3D G3DSA:3.40.50.970 1 351 2.4E-102 T 12-10-2018 K04M3_38590 6386c3684c1b67af42af8103be7f74b4 364 Pfam PF00676 Dehydrogenase E1 component 36 321 1.1E-75 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 SUPERFAMILY SSF46785 6 88 7.23E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 SUPERFAMILY SSF53850 95 302 1.86E-37 T 12-10-2018 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 Gene3D G3DSA:1.10.10.10 8 97 1.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 Pfam PF03466 LysR substrate binding domain 94 298 5.9E-35 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 Gene3D G3DSA:3.40.190.10 164 266 1.2E-47 T 12-10-2018 K04M3_35590 4cc323380722b479099fb2d11831ed1e 308 Gene3D G3DSA:3.40.190.10 104 294 1.2E-47 T 12-10-2018 K04M3_51600 e77bccb092118dd665ebec3160baaa88 439 Gene3D G3DSA:1.10.443.10 199 419 2.0E-34 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_51600 e77bccb092118dd665ebec3160baaa88 439 Pfam PF00589 Phage integrase family 207 417 5.2E-14 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_51600 e77bccb092118dd665ebec3160baaa88 439 Gene3D G3DSA:1.10.150.130 90 193 2.9E-13 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_51600 e77bccb092118dd665ebec3160baaa88 439 SUPERFAMILY SSF56349 200 422 2.21E-24 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_51600 e77bccb092118dd665ebec3160baaa88 439 SUPERFAMILY SSF47823 106 178 6.28E-13 T 12-10-2018 K04M3_20530 ed259ee095083d34b7a8309e4eb461f3 324 PIRSF PIRSF034367 1 324 3.6E-198 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 K04M3_20530 ed259ee095083d34b7a8309e4eb461f3 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 1.2E-184 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_29310 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_05460 4d991a244b7f7d125bed01225c02ce97 319 SUPERFAMILY SSF53850 38 317 5.65E-65 T 12-10-2018 K04M3_05460 4d991a244b7f7d125bed01225c02ce97 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 13 305 3.3E-74 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 K04M3_05460 4d991a244b7f7d125bed01225c02ce97 319 Gene3D G3DSA:3.40.190.10 121 263 1.5E-98 T 12-10-2018 K04M3_05460 4d991a244b7f7d125bed01225c02ce97 319 Gene3D G3DSA:3.40.190.10 37 307 1.5E-98 T 12-10-2018 K04M3_05460 4d991a244b7f7d125bed01225c02ce97 319 Pfam PF12849 PBP superfamily domain 34 290 3.7E-29 T 12-10-2018 IPR024370 PBP domain K04M3_19330 abc48dac7602b0d15297cb9d97187899 291 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 16 125 7.6E-9 T 12-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain K04M3_19330 abc48dac7602b0d15297cb9d97187899 291 Gene3D G3DSA:3.90.1570.30 3 150 1.1E-6 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Gene3D G3DSA:3.30.750.80 396 487 4.4E-35 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 SMART SM00981 56 154 6.9E-19 T 12-10-2018 IPR004114 THUMP domain GO:0003723 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 7.8E-5 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 7.8E-5 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Pfam PF02926 THUMP domain 30 153 2.0E-12 T 12-10-2018 IPR004114 THUMP domain GO:0003723 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Gene3D G3DSA:3.40.50.150 488 706 1.2E-73 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 3.5E-27 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 PIRSF PIRSF037618 1 706 1.1E-295 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.8E-61 T 12-10-2018 IPR000241 Putative RNA methylase domain K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Gene3D G3DSA:3.30.2130.30 6 255 2.5E-135 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 SUPERFAMILY SSF53335 139 371 1.3E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 SUPERFAMILY SSF53335 399 705 7.86E-69 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Gene3D G3DSA:3.40.50.150 169 371 2.5E-135 T 12-10-2018 K04M3_16300 969930ad2d99728543afd168e19fe5a8 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.456 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 K04M3_36350 cdb666acecd9241810490af749d3dc8b 497 Pfam PF02447 GntP family permease 6 459 1.6E-120 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 K04M3_36350 cdb666acecd9241810490af749d3dc8b 497 PIRSF PIRSF002746 1 462 3.7E-130 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Gene3D G3DSA:3.40.50.12470 557 803 8.3E-172 T 12-10-2018 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Gene3D G3DSA:3.40.50.11610 724 930 8.3E-172 T 12-10-2018 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Gene3D G3DSA:1.10.287.1150 85 167 2.1E-30 T 12-10-2018 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Gene3D G3DSA:3.40.50.970 168 534 1.2E-147 T 12-10-2018 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 SUPERFAMILY SSF52518 577 793 2.69E-53 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 SUPERFAMILY SSF52518 122 532 2.55E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 SMART SM00861 594 787 2.0E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 2.1E-54 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 2.0E-66 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 PIRSF PIRSF000157 1 935 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 K04M3_08420 5959cbf204f3d1191d75f08cd42a68f5 941 Pfam PF00676 Dehydrogenase E1 component 221 514 6.5E-49 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 K04M3_43850 2c3e0e366cdcd2bb7354aac32fc1428e 300 Pfam PF00682 HMGL-like 5 274 6.8E-50 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 K04M3_43850 2c3e0e366cdcd2bb7354aac32fc1428e 300 SUPERFAMILY SSF51569 3 291 1.37E-72 T 12-10-2018 K04M3_43850 2c3e0e366cdcd2bb7354aac32fc1428e 300 Gene3D G3DSA:3.20.20.70 1 296 4.5E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_32280 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 K04M3_02110 0e6a5a7f01d3ed3ef08301f4d9992755 335 Pfam PF02397 Bacterial sugar transferase 148 330 4.1E-63 T 12-10-2018 IPR003362 Bacterial sugar transferase K04M3_07410 4f29f8687512816acb1740ba841ce3d6 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.193 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 K04M3_07410 4f29f8687512816acb1740ba841ce3d6 283 SUPERFAMILY SSF51569 2 278 3.94E-104 T 12-10-2018 K04M3_07410 4f29f8687512816acb1740ba841ce3d6 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.0E-116 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 K04M3_07410 4f29f8687512816acb1740ba841ce3d6 283 Pfam PF00793 DAHP synthetase I family 10 275 6.0E-70 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 K04M3_07410 4f29f8687512816acb1740ba841ce3d6 283 Gene3D G3DSA:3.20.20.70 1 283 2.0E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 Gene3D G3DSA:3.40.47.10 246 389 2.2E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 SUPERFAMILY SSF53901 7 235 1.28E-37 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 1.8E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 SMART SM00825 Beta-ketoacyl synthase 61 338 1.3E-9 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 100 236 6.8E-20 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 SUPERFAMILY SSF53901 210 391 1.22E-46 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_08800 ada0cea903e5cd2a7f129c202ed3c877 395 Gene3D G3DSA:3.40.47.10 24 242 3.0E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_34400 4a65bb0a2a26cf9a2d3e649d4e13bffe 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.5E-115 T 12-10-2018 IPR022522 Flagellar motor stator, MotA K04M3_34400 4a65bb0a2a26cf9a2d3e649d4e13bffe 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site K04M3_34400 4a65bb0a2a26cf9a2d3e649d4e13bffe 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 3.2E-9 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_01750 36f1025b5858f262a492c0e6fbfe5db9 262 Pfam PF00535 Glycosyl transferase family 2 5 121 2.7E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_01750 36f1025b5858f262a492c0e6fbfe5db9 262 Pfam PF02709 N-terminal domain of galactosyltransferase 166 226 8.8E-15 T 12-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 K04M3_01750 36f1025b5858f262a492c0e6fbfe5db9 262 Gene3D G3DSA:3.90.550.10 1 235 3.2E-47 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01750 36f1025b5858f262a492c0e6fbfe5db9 262 SUPERFAMILY SSF53448 1 248 4.71E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_43670 f94dd8c4d44bb5be9766f4f07c9db88d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 6.7E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_43670 f94dd8c4d44bb5be9766f4f07c9db88d 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 1.1E-126 T 12-10-2018 IPR017784 ABC transporter, choline, permease protein K04M3_43670 f94dd8c4d44bb5be9766f4f07c9db88d 280 Gene3D G3DSA:1.10.3720.10 86 274 1.9E-34 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_43670 f94dd8c4d44bb5be9766f4f07c9db88d 280 SUPERFAMILY SSF161098 88 272 1.7E-39 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 Gene3D G3DSA:3.30.1330.30 1 77 1.0E-26 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.6E-86 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.181 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 Gene3D G3DSA:3.40.1280.10 78 244 2.9E-64 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.2E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 SUPERFAMILY SSF55315 2 77 1.08E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 SUPERFAMILY SSF75217 69 244 7.85E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.0E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 K04M3_29410 e1f19e20fd2c2f69cd590508baac145e 247 SMART SM00967 5 81 1.2E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 K04M3_29430 71bbc28035f675d12e3165004bb3537c 141 Gene3D G3DSA:1.10.10.10 1 136 2.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_29430 71bbc28035f675d12e3165004bb3537c 141 Pfam PF02082 Transcriptional regulator 1 82 1.0E-23 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type K04M3_29430 71bbc28035f675d12e3165004bb3537c 141 SUPERFAMILY SSF46785 2 131 4.43E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_29430 71bbc28035f675d12e3165004bb3537c 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.99 T 12-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 K04M3_29430 71bbc28035f675d12e3165004bb3537c 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.2E-36 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type K04M3_29430 71bbc28035f675d12e3165004bb3537c 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.699 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 Gene3D G3DSA:3.40.640.10 58 326 4.8E-209 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 Pfam PF01212 Beta-eliminating lyase 46 431 1.3E-97 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 Gene3D G3DSA:3.90.1150.10 6 460 4.8E-209 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 SUPERFAMILY SSF53383 2 465 5.66E-145 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_47860 23f50aec9bb7b91cb514be8b7beba177 466 PIRSF PIRSF001386 1 466 3.7E-229 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 K04M3_29250 c1953872fe4a08936c75fcc2117a3ea6 197 Pfam PF02525 Flavodoxin-like fold 10 165 4.4E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold K04M3_29250 c1953872fe4a08936c75fcc2117a3ea6 197 SUPERFAMILY SSF52218 9 184 2.99E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_29250 c1953872fe4a08936c75fcc2117a3ea6 197 Gene3D G3DSA:3.40.50.360 10 185 3.9E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_29250 c1953872fe4a08936c75fcc2117a3ea6 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 48.738 T 12-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 Gene3D G3DSA:1.25.40.10 37 241 2.9E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 SMART SM00028 73 106 23.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 SMART SM00028 143 176 0.81 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 SMART SM00028 107 140 35.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 SMART SM00028 39 72 48.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 11 239 1.0E-80 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 SUPERFAMILY SSF81901 34 201 1.8E-21 T 12-10-2018 K04M3_14210 3ba3145396f65e05bdf75c15a49d645d 241 Pfam PF13431 Tetratricopeptide repeat 95 127 3.5E-6 T 12-10-2018 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 Pfam PF03466 LysR substrate binding domain 94 301 2.6E-38 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 Gene3D G3DSA:3.40.190.10 98 298 4.0E-59 T 12-10-2018 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 SUPERFAMILY SSF53850 95 301 3.88E-39 T 12-10-2018 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 Gene3D G3DSA:3.40.190.10 169 270 4.0E-59 T 12-10-2018 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 SUPERFAMILY SSF46785 10 116 1.59E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34730 b2f8536674e7ff5200f321b9764412d8 309 Gene3D G3DSA:1.10.10.10 9 95 2.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 SUPERFAMILY SSF55785 8 102 5.06E-9 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 SUPERFAMILY SSF55874 198 347 6.81E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 Gene3D G3DSA:3.30.450.20 1 112 7.5E-29 T 12-10-2018 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 Pfam PF00989 PAS fold 7 111 7.8E-17 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 2.7E-7 T 12-10-2018 IPR000014 PAS domain K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.1E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 SMART SM00091 4 72 6.6E-8 T 12-10-2018 IPR000014 PAS domain K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 Gene3D G3DSA:3.30.565.10 192 348 1.0E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 SMART SM00388 129 194 2.7E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 Gene3D G3DSA:1.10.287.130 114 191 2.6E-13 T 12-10-2018 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 SMART SM00387 233 348 4.3E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 SUPERFAMILY SSF47384 125 190 4.71E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_01050 47ae781ebf445af35c65ccbfed3cb433 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 5.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_25070 3e23c039ae91f51511de59a78ba5b9cf 324 Gene3D G3DSA:1.50.10.150 5 318 1.1E-44 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily K04M3_25070 3e23c039ae91f51511de59a78ba5b9cf 324 Pfam PF03595 Voltage-dependent anion channel 19 306 2.3E-31 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 SUPERFAMILY SSF51735 143 319 2.34E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 PIRSF PIRSF000203 1 516 1.8E-269 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 SMART SM01003 4 143 7.8E-67 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 Gene3D G3DSA:3.40.50.720 143 324 8.1E-157 T 12-10-2018 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 2.7E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 Gene3D G3DSA:3.40.50.720 3 371 8.1E-157 T 12-10-2018 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 1.3E-270 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 7.9E-75 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 SMART SM01002 152 317 3.5E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 SUPERFAMILY SSF52283 2 174 6.55E-51 T 12-10-2018 K04M3_40550 0a6c9aec05df5d41164cc18b4403b13f 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 9.7E-37 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 K04M3_34040 eb0a956e9eacb6ff23df0dcf3ab3d8c5 487 Gene3D G3DSA:2.60.40.2440 281 382 1.1E-10 T 12-10-2018 IPR038175 CBM21 domain superfamily GO:0005515 K04M3_34040 eb0a956e9eacb6ff23df0dcf3ab3d8c5 487 Gene3D G3DSA:1.10.10.60 166 276 3.7E-23 T 12-10-2018 K04M3_34040 eb0a956e9eacb6ff23df0dcf3ab3d8c5 487 SMART SM00342 184 266 7.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_34040 eb0a956e9eacb6ff23df0dcf3ab3d8c5 487 Pfam PF12833 Helix-turn-helix domain 191 268 5.0E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_34040 eb0a956e9eacb6ff23df0dcf3ab3d8c5 487 SUPERFAMILY SSF46689 221 271 2.02E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_39830 a7ded90443571422834bc270c59989c7 449 TIGRFAM TIGR03187 DGQHR: DGQHR domain 7 272 1.5E-51 T 12-10-2018 IPR017601 DGQHR-containing domain K04M3_39830 a7ded90443571422834bc270c59989c7 449 Pfam PF14072 DNA-sulfur modification-associated 5 316 4.2E-53 T 12-10-2018 IPR017642 DNA sulphur modification protein DndB K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 2.5E-26 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 2.3E-66 T 12-10-2018 K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 Gene3D G3DSA:3.30.1240.10 87 192 2.5E-81 T 12-10-2018 K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 12-10-2018 K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 Gene3D G3DSA:3.40.50.1000 4 264 2.5E-81 T 12-10-2018 IPR023214 HAD superfamily K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 12-10-2018 K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 SUPERFAMILY SSF56784 1 268 3.56E-76 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_16990 9ff718cdcd4f4b261f23cd19bba72d5b 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 1.3E-61 T 12-10-2018 IPR000150 Cof family GO:0016787 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 SUPERFAMILY SSF51735 1 173 2.77E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_28990 d338d7cb708559d03488f31bfb509265 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.052 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 2.0E-15 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.2E-118 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 5.5E-31 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 SMART SM00859 3 146 4.1E-44 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 Gene3D G3DSA:3.30.360.10 153 312 1.0E-120 T 12-10-2018 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 Gene3D G3DSA:3.40.50.720 6 329 1.0E-120 T 12-10-2018 K04M3_28990 d338d7cb708559d03488f31bfb509265 334 SUPERFAMILY SSF55347 154 308 1.83E-50 T 12-10-2018 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.3E-130 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 Gene3D G3DSA:3.90.226.10 25 285 1.7E-79 T 12-10-2018 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.604 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 Pfam PF01039 Carboxyl transferase domain 99 242 1.3E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 K04M3_36400 ca1e0a6d9f9cab8d8fd3b98f2e4c1e76 287 SUPERFAMILY SSF52096 25 284 1.09E-80 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 Gene3D G3DSA:3.40.50.2300 82 323 4.1E-64 T 12-10-2018 K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 80 328 1.6E-28 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 Gene3D G3DSA:3.40.50.2300 179 307 4.1E-64 T 12-10-2018 K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 SUPERFAMILY SSF53822 79 333 1.76E-54 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 Gene3D G3DSA:1.10.260.40 13 79 1.5E-17 T 12-10-2018 K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 24 42 - T 12-10-2018 K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 SUPERFAMILY SSF47413 21 79 1.55E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 SMART SM00354 21 91 1.0E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_00480 4bc1f3bf84b1090dd46bd10ce9525064 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 23 68 3.3E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_10230 df38f8dd676f8e399c06ed600db9afeb 278 SUPERFAMILY SSF53335 22 265 1.02E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_10230 df38f8dd676f8e399c06ed600db9afeb 278 Gene3D G3DSA:3.40.50.150 24 278 4.8E-56 T 12-10-2018 K04M3_10230 df38f8dd676f8e399c06ed600db9afeb 278 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 18 274 40.193 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 K04M3_10230 df38f8dd676f8e399c06ed600db9afeb 278 Pfam PF08241 Methyltransferase domain 67 163 1.1E-13 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 K04M3_27020 8b16f1201c72255a1802ce77d64e525f 102 SUPERFAMILY SSF102829 6 95 1.01E-23 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily K04M3_27020 8b16f1201c72255a1802ce77d64e525f 102 Gene3D G3DSA:1.10.20.30 1 47 1.1E-18 T 12-10-2018 K04M3_27020 8b16f1201c72255a1802ce77d64e525f 102 Pfam PF05164 Cell division protein ZapA 6 89 5.6E-19 T 12-10-2018 IPR007838 Cell division protein ZapA-like K04M3_47660 d6cf9f368005bfdf296452f7d704b30d 104 SUPERFAMILY SSF54909 3 86 1.66E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_47660 d6cf9f368005bfdf296452f7d704b30d 104 Gene3D G3DSA:3.30.70.100 2 97 3.9E-5 T 12-10-2018 K04M3_15890 71376a500e70ef3e8d386d04ad901a74 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 66 1.6E-32 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing K04M3_15890 71376a500e70ef3e8d386d04ad901a74 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 37 3.8E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_15890 71376a500e70ef3e8d386d04ad901a74 66 PIRSF PIRSF036704 1 66 1.2E-33 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing K04M3_29470 5e7b835780674c417b4ae3971bff3b3a 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 8.7E-23 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 K04M3_18440 a1dc23c011a66ef79fbfc37d93bec7ab 296 Gene3D G3DSA:1.10.443.10 101 289 7.1E-52 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_18440 a1dc23c011a66ef79fbfc37d93bec7ab 296 Pfam PF00589 Phage integrase family 109 270 4.0E-39 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_18440 a1dc23c011a66ef79fbfc37d93bec7ab 296 SUPERFAMILY SSF56349 9 277 4.12E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_18440 a1dc23c011a66ef79fbfc37d93bec7ab 296 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 92 4.9E-18 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 K04M3_18440 a1dc23c011a66ef79fbfc37d93bec7ab 296 Gene3D G3DSA:1.10.150.130 10 94 1.5E-12 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_16780 b0c3ff4aebb4fd42ec7c7b254c46b0ad 172 Pfam PF00857 Isochorismatase family 5 161 3.3E-32 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 K04M3_16780 b0c3ff4aebb4fd42ec7c7b254c46b0ad 172 SUPERFAMILY SSF52499 3 163 1.28E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_16780 b0c3ff4aebb4fd42ec7c7b254c46b0ad 172 Gene3D G3DSA:3.40.50.850 1 171 1.2E-40 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 K04M3_15960 6796e4335cf2683ba488c04a54aff5cd 406 Pfam PF00909 Ammonium Transporter Family 23 399 1.1E-88 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 K04M3_15960 6796e4335cf2683ba488c04a54aff5cd 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 K04M3_15960 6796e4335cf2683ba488c04a54aff5cd 406 Gene3D G3DSA:1.10.3430.10 2 406 2.3E-102 T 12-10-2018 IPR029020 Ammonium/urea transporter K04M3_15960 6796e4335cf2683ba488c04a54aff5cd 406 SUPERFAMILY SSF111352 17 384 3.66E-96 T 12-10-2018 K04M3_29140 91d883b6dad1e8e3936fc09146715c5a 91 Pfam PF04077 DsrH like protein 10 86 3.8E-23 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 K04M3_29140 91d883b6dad1e8e3936fc09146715c5a 91 Gene3D G3DSA:3.40.1260.10 1 90 1.5E-25 T 12-10-2018 IPR027396 DsrEFH-like K04M3_29140 91d883b6dad1e8e3936fc09146715c5a 91 SUPERFAMILY SSF75169 1 90 3.53E-23 T 12-10-2018 IPR027396 DsrEFH-like K04M3_29140 91d883b6dad1e8e3936fc09146715c5a 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 2.6E-25 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 K04M3_18490 7029d47abd47c2ef968d80483c371549 589 SUPERFAMILY SSF116726 321 401 2.09E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_18490 7029d47abd47c2ef968d80483c371549 589 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 421 573 2.7E-21 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_18490 7029d47abd47c2ef968d80483c371549 589 Pfam PF06826 Predicted Permease Membrane Region 29 205 2.6E-30 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_18490 7029d47abd47c2ef968d80483c371549 589 Pfam PF06826 Predicted Permease Membrane Region 416 584 1.5E-30 T 12-10-2018 IPR006512 YidE/YbjL duplication K04M3_32410 fd5e81db4d01d31954ce796e144e2d90 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.7E-24 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_32410 fd5e81db4d01d31954ce796e144e2d90 223 Gene3D G3DSA:1.10.3720.10 1 222 1.1E-52 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_32410 fd5e81db4d01d31954ce796e144e2d90 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.4E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_32410 fd5e81db4d01d31954ce796e144e2d90 223 SUPERFAMILY SSF161098 13 203 3.14E-43 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_45330 de0c1f91a1ff7b7bbd15cec8cc077163 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.3E-65 T 12-10-2018 IPR007432 Protein of unknown function DUF480 K04M3_45330 de0c1f91a1ff7b7bbd15cec8cc077163 216 Gene3D G3DSA:1.10.10.10 95 175 1.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_45330 de0c1f91a1ff7b7bbd15cec8cc077163 216 SUPERFAMILY SSF46785 90 174 6.39E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45330 de0c1f91a1ff7b7bbd15cec8cc077163 216 SUPERFAMILY SSF46785 2 84 1.36E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45330 de0c1f91a1ff7b7bbd15cec8cc077163 216 Gene3D G3DSA:1.10.10.10 1 90 5.4E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_45330 de0c1f91a1ff7b7bbd15cec8cc077163 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 35.38 T 12-10-2018 IPR007432 Protein of unknown function DUF480 K04M3_11280 142c917f0629b1d160497fa5c85d8059 77 Pfam PF06146 Phosphate-starvation-inducible E 8 68 3.3E-10 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like K04M3_11280 142c917f0629b1d160497fa5c85d8059 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.3E-41 T 12-10-2018 IPR013468 Conserved hypothetical protein CHP02647 K04M3_31850 2a7a6626c70206702f1389b47ba32825 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 3.7E-25 T 12-10-2018 IPR009962 Protein of unknown function DUF1488 K04M3_31850 2a7a6626c70206702f1389b47ba32825 87 Gene3D G3DSA:3.30.160.140 1 87 4.8E-33 T 12-10-2018 IPR036692 Shew3726-like superfamily K04M3_31850 2a7a6626c70206702f1389b47ba32825 87 SUPERFAMILY SSF160272 1 86 4.18E-29 T 12-10-2018 IPR036692 Shew3726-like superfamily K04M3_15160 c9b6d77a17668e190909dbe4fc0bc75c 447 Pfam PF03616 Sodium/glutamate symporter 8 350 3.5E-13 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_35500 6b5096198445adb027ab7264af9a7418 655 Gene3D G3DSA:1.10.3470.10 3 328 2.0E-60 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_35500 6b5096198445adb027ab7264af9a7418 655 Gene3D G3DSA:1.10.3470.10 334 653 1.1E-70 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_35500 6b5096198445adb027ab7264af9a7418 655 SUPERFAMILY SSF81345 9 323 1.23E-55 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_35500 6b5096198445adb027ab7264af9a7418 655 SUPERFAMILY SSF81345 349 651 5.62E-63 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_35500 6b5096198445adb027ab7264af9a7418 655 Pfam PF01032 FecCD transport family 12 323 3.0E-62 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_35500 6b5096198445adb027ab7264af9a7418 655 Pfam PF01032 FecCD transport family 373 651 2.1E-68 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 SMART SM00359 3 87 3.0E-15 T 12-10-2018 IPR002478 PUA domain GO:0003723 K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 170 376 3.7E-29 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 Gene3D G3DSA:3.30.750.80 73 180 2.5E-36 T 12-10-2018 K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 Gene3D G3DSA:3.40.50.150 181 396 4.4E-69 T 12-10-2018 K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 SUPERFAMILY SSF88697 4 73 1.99E-17 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 SUPERFAMILY SSF53335 78 393 1.03E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.35 T 12-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 K04M3_16590 bd377dd3544d6136ab4e33686595b474 397 Gene3D G3DSA:2.30.130.10 1 72 3.5E-29 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 K04M3_44760 ef97a0f23c48505f49d0cd28be1efcd8 334 Gene3D G3DSA:3.40.50.2300 3 126 4.0E-29 T 12-10-2018 K04M3_44760 ef97a0f23c48505f49d0cd28be1efcd8 334 SUPERFAMILY SSF52172 4 120 2.42E-28 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_44760 ef97a0f23c48505f49d0cd28be1efcd8 334 Pfam PF00072 Response regulator receiver domain 5 115 1.5E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_44760 ef97a0f23c48505f49d0cd28be1efcd8 334 Gene3D G3DSA:3.40.1550.10 139 328 3.0E-31 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_44760 ef97a0f23c48505f49d0cd28be1efcd8 334 SUPERFAMILY SSF103039 140 329 7.59E-39 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_44760 ef97a0f23c48505f49d0cd28be1efcd8 334 SMART SM00448 3 115 2.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_29180 eea800052c40aa364bc5732a3bdb35f6 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 3.2E-33 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 K04M3_29180 eea800052c40aa364bc5732a3bdb35f6 260 SUPERFAMILY SSF54534 46 253 1.65E-64 T 12-10-2018 K04M3_29180 eea800052c40aa364bc5732a3bdb35f6 260 Gene3D G3DSA:3.10.50.40 149 260 5.7E-43 T 12-10-2018 K04M3_29180 eea800052c40aa364bc5732a3bdb35f6 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain K04M3_29180 eea800052c40aa364bc5732a3bdb35f6 260 Gene3D G3DSA:1.10.287.460 31 148 1.1E-32 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 Gene3D G3DSA:3.40.50.720 1 208 1.1E-86 T 12-10-2018 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 SUPERFAMILY SSF51735 28 209 1.34E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 5.6E-17 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.6E-24 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 Gene3D G3DSA:1.10.1040.10 209 494 3.8E-120 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 SUPERFAMILY SSF48179 210 341 1.7E-38 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.1E-124 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.956 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.2E-59 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 K04M3_00300 aaf1c132ba02969a42dce9d173bf948a 494 SUPERFAMILY SSF48179 348 487 1.34E-42 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 K04M3_15860 a02a69436b433a7819ff4c54f36c179f 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 6.7E-27 T 12-10-2018 IPR021735 Protein of unknown function DUF3306 K04M3_29090 962c9cc23a259d1ea92c89944b371ec9 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 52 4.7E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain K04M3_29090 962c9cc23a259d1ea92c89944b371ec9 62 Gene3D G3DSA:1.10.10.1100 1 56 4.3E-18 T 12-10-2018 K04M3_48130 cee0555df030a661465080176e381227 306 Gene3D G3DSA:3.40.800.10 1 306 3.7E-105 T 12-10-2018 K04M3_48130 cee0555df030a661465080176e381227 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 9.0E-93 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 K04M3_48130 cee0555df030a661465080176e381227 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 K04M3_48130 cee0555df030a661465080176e381227 306 SUPERFAMILY SSF52768 12 302 4.32E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily K04M3_48130 cee0555df030a661465080176e381227 306 PIRSF PIRSF036979 13 305 7.8E-98 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 K04M3_48130 cee0555df030a661465080176e381227 306 Pfam PF00491 Arginase family 33 298 3.8E-90 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 2.7E-116 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 SUPERFAMILY SSF53383 21 388 1.79E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 Gene3D G3DSA:3.40.640.10 3 255 3.5E-77 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 5.4E-172 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 PIRSF PIRSF001434 1 391 1.5E-125 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_11540 d4bb7e38814311a9d24b28dec17f07fb 401 Gene3D G3DSA:3.90.1150.10 256 391 2.0E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_34110 3733c89cb0cf22e3c630a881df021e4b 254 SUPERFAMILY SSF52343 112 254 3.54E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_34110 3733c89cb0cf22e3c630a881df021e4b 254 Gene3D G3DSA:3.40.50.80 104 254 7.1E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain K04M3_34110 3733c89cb0cf22e3c630a881df021e4b 254 Gene3D G3DSA:2.40.30.10 3 102 2.9E-23 T 12-10-2018 K04M3_34110 3733c89cb0cf22e3c630a881df021e4b 254 Pfam PF00970 Oxidoreductase FAD-binding domain 23 96 4.9E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 K04M3_34110 3733c89cb0cf22e3c630a881df021e4b 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 228 2.2E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 K04M3_34110 3733c89cb0cf22e3c630a881df021e4b 254 SUPERFAMILY SSF63380 10 99 1.02E-18 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel K04M3_45610 977f4974b4d20b32007de2c50d2faf48 617 SUPERFAMILY SSF69593 382 614 1.96E-31 T 12-10-2018 K04M3_45610 977f4974b4d20b32007de2c50d2faf48 617 SUPERFAMILY SSF103473 7 416 2.62E-24 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_45610 977f4974b4d20b32007de2c50d2faf48 617 Pfam PF01553 Acyltransferase 435 563 5.8E-25 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_45610 977f4974b4d20b32007de2c50d2faf48 617 Gene3D G3DSA:1.20.1250.20 6 415 2.1E-23 T 12-10-2018 K04M3_45610 977f4974b4d20b32007de2c50d2faf48 617 Pfam PF07690 Major Facilitator Superfamily 40 380 1.3E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_45610 977f4974b4d20b32007de2c50d2faf48 617 SMART SM00563 450 566 1.3E-30 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_44960 b0f0d102f5eda4fadb0c01d29e707bdc 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 K04M3_44960 b0f0d102f5eda4fadb0c01d29e707bdc 137 SUPERFAMILY SSF75620 7 117 1.37E-12 T 12-10-2018 K04M3_44960 b0f0d102f5eda4fadb0c01d29e707bdc 137 Pfam PF00472 RF-1 domain 7 132 3.9E-24 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 K04M3_44960 b0f0d102f5eda4fadb0c01d29e707bdc 137 Gene3D G3DSA:3.30.160.20 1 136 2.4E-39 T 12-10-2018 K04M3_37860 ef26762681064723720e9eeea7749546 490 Gene3D G3DSA:3.20.20.450 240 488 3.3E-73 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_37860 ef26762681064723720e9eeea7749546 490 SMART SM00052 239 481 4.2E-73 T 12-10-2018 IPR001633 EAL domain K04M3_37860 ef26762681064723720e9eeea7749546 490 Pfam PF00563 EAL domain 246 476 4.2E-61 T 12-10-2018 IPR001633 EAL domain K04M3_37860 ef26762681064723720e9eeea7749546 490 Pfam PF12792 CSS motif domain associated with EAL 33 108 4.5E-5 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain K04M3_37860 ef26762681064723720e9eeea7749546 490 SUPERFAMILY SSF141868 246 484 1.15E-71 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 Gene3D G3DSA:1.10.287.950 149 476 7.0E-67 T 12-10-2018 K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 2.8E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 2.8E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 2.8E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 440 4.9E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 SMART SM00283 213 474 4.1E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_42060 4e0d74db182c044f453080999fd05cdb 476 SUPERFAMILY SSF58104 165 474 5.62E-67 T 12-10-2018 K04M3_04600 fc0dd26525b7f9719902b719b4cb8fb2 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 1.7E-18 T 12-10-2018 IPR021710 Protein of unknown function DUF3293 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 Gene3D G3DSA:3.30.9.90 79 446 3.9E-189 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 Gene3D G3DSA:3.50.50.60 7 382 3.9E-189 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 3.8E-7 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 SUPERFAMILY SSF51905 4 444 8.5E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 542 7.7E-49 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 SUPERFAMILY SSF54862 446 545 7.06E-28 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 3.6E-6 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.6E-6 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 Gene3D G3DSA:3.30.70.20 447 540 7.1E-38 T 12-10-2018 K04M3_44080 88ea2dbdb2ec3a4a8827581d0396b48b 545 SUPERFAMILY SSF54373 211 306 9.42E-37 T 12-10-2018 K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02620 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_39450 1cd008d077cb1c8380bfd5090c09e98f 281 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 39 147 9.3E-9 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 K04M3_39450 1cd008d077cb1c8380bfd5090c09e98f 281 Gene3D G3DSA:3.40.50.1010 1 159 9.0E-17 T 12-10-2018 K04M3_39450 1cd008d077cb1c8380bfd5090c09e98f 281 Gene3D G3DSA:1.10.150.20 169 204 1.5E-5 T 12-10-2018 K04M3_39450 1cd008d077cb1c8380bfd5090c09e98f 281 SUPERFAMILY SSF47807 174 201 1.12E-6 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily K04M3_39450 1cd008d077cb1c8380bfd5090c09e98f 281 SUPERFAMILY SSF88723 1 150 2.81E-13 T 12-10-2018 IPR029060 PIN-like domain superfamily K04M3_28200 aba33e1f2d20c1489dfbb5505e8cd494 162 Pfam PF04093 rod shape-determining protein MreD 9 154 4.6E-40 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 K04M3_28200 aba33e1f2d20c1489dfbb5505e8cd494 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.3E-36 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 K04M3_28200 aba33e1f2d20c1489dfbb5505e8cd494 162 PIRSF PIRSF018472 1 162 6.7E-42 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 SUPERFAMILY SSF56601 11 283 5.51E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 Gene3D G3DSA:2.60.410.10 283 373 5.2E-31 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 3.8E-29 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 Gene3D G3DSA:3.40.710.10 27 282 4.1E-89 T 12-10-2018 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 1.1E-93 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 SMART SM00936 283 373 1.4E-38 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 3.0E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 3.0E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_06950 6a700b6e50390b3c13e54d28b711786a 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 3.0E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 K04M3_23570 8895793ad7c7a653ff1d9d4ec7b3a104 116 Pfam PF03960 ArsC family 6 115 3.0E-20 T 12-10-2018 IPR006660 Arsenate reductase-like K04M3_23570 8895793ad7c7a653ff1d9d4ec7b3a104 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 1.5E-47 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 K04M3_23570 8895793ad7c7a653ff1d9d4ec7b3a104 116 Gene3D G3DSA:3.40.30.10 1 116 2.0E-48 T 12-10-2018 K04M3_23570 8895793ad7c7a653ff1d9d4ec7b3a104 116 SUPERFAMILY SSF52833 2 116 1.24E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_41860 1560abcd2ca992f2616706fb602972c0 411 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 410 1.4E-130 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) K04M3_41860 1560abcd2ca992f2616706fb602972c0 411 SUPERFAMILY SSF56935 22 410 5.04E-94 T 12-10-2018 K04M3_41860 1560abcd2ca992f2616706fb602972c0 411 Gene3D G3DSA:2.40.160.60 22 411 1.8E-124 T 12-10-2018 K04M3_17490 f60b20ef170a7de2243b49134c27616c 119 Gene3D G3DSA:1.25.40.10 1 117 2.6E-39 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_17490 f60b20ef170a7de2243b49134c27616c 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 2.0E-46 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 K04M3_17490 f60b20ef170a7de2243b49134c27616c 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 9.8E-45 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 K04M3_17960 f5c5e1928422dfb11f32a34af7c07c7d 201 Gene3D G3DSA:3.40.50.720 2 173 1.1E-7 T 12-10-2018 K04M3_17960 f5c5e1928422dfb11f32a34af7c07c7d 201 SUPERFAMILY SSF51735 1 159 4.44E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.0E-98 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 SUPERFAMILY SSF48592 3 230 1.31E-65 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 Gene3D G3DSA:1.10.560.10 8 521 2.7E-238 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 Gene3D G3DSA:3.50.7.10 173 379 2.7E-238 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.4E-254 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.506 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 SUPERFAMILY SSF52029 185 376 2.24E-83 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 SUPERFAMILY SSF48592 372 525 2.14E-32 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 K04M3_29940 c6e84ca9e998dc6f998725b5a718f3ce 548 Gene3D G3DSA:3.30.260.10 138 410 2.7E-238 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82714 184 274 1.96E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:3.30.70.1430 566 667 0.0 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:3.30.70.1440 668 865 0.0 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82866 299 499 1.96E-53 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82693 137 332 2.88E-22 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82693 39 132 4.19E-23 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:3.30.2090.10 720 808 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82714 721 805 2.88E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82693 671 856 7.85E-25 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1038 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82693 564 670 3.92E-24 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:1.20.1640.10 512 1023 0.0 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:3.30.70.1430 39 816 0.0 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 SUPERFAMILY SSF82866 830 1026 5.75E-45 T 12-10-2018 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Pfam PF00873 AcrB/AcrD/AcrF family 3 1026 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_36560 eb8559d12451b8333edd5dadc63ed32d 1046 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains K04M3_31500 ab6a70efd8642c9d1406e4f4517a0e97 547 Pfam PF04321 RmlD substrate binding domain 69 202 8.1E-16 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 K04M3_31500 ab6a70efd8642c9d1406e4f4517a0e97 547 Gene3D G3DSA:3.40.50.720 1 240 7.2E-23 T 12-10-2018 K04M3_31500 ab6a70efd8642c9d1406e4f4517a0e97 547 SUPERFAMILY SSF51735 256 342 4.19E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_31500 ab6a70efd8642c9d1406e4f4517a0e97 547 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 256 342 3.3E-7 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 K04M3_31500 ab6a70efd8642c9d1406e4f4517a0e97 547 SUPERFAMILY SSF51735 1 228 2.23E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_31500 ab6a70efd8642c9d1406e4f4517a0e97 547 Gene3D G3DSA:3.40.50.720 252 347 1.2E-9 T 12-10-2018 K04M3_46180 303d00237b53136f1e19bb0764c97288 477 SMART SM00345 27 86 2.0E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_46180 303d00237b53136f1e19bb0764c97288 477 Pfam PF00155 Aminotransferase class I and II 149 461 2.8E-14 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_46180 303d00237b53136f1e19bb0764c97288 477 SUPERFAMILY SSF53383 93 467 9.97E-65 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_46180 303d00237b53136f1e19bb0764c97288 477 Gene3D G3DSA:3.40.640.10 100 458 2.8E-55 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_46180 303d00237b53136f1e19bb0764c97288 477 SUPERFAMILY SSF46785 20 88 7.39E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46180 303d00237b53136f1e19bb0764c97288 477 Gene3D G3DSA:1.10.10.10 19 88 1.1E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46180 303d00237b53136f1e19bb0764c97288 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 86 1.0E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_10970 49bd5c82dde81ca093aef9e5c6c1954e 436 Pfam PF01593 Flavin containing amine oxidoreductase 16 274 1.3E-16 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 K04M3_10970 49bd5c82dde81ca093aef9e5c6c1954e 436 SUPERFAMILY SSF51905 7 419 1.23E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_10970 49bd5c82dde81ca093aef9e5c6c1954e 436 Gene3D G3DSA:3.50.50.60 2 283 1.5E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 Gene3D G3DSA:1.10.260.40 3 60 5.0E-22 T 12-10-2018 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 Gene3D G3DSA:3.40.50.2300 162 291 8.7E-89 T 12-10-2018 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 Pfam PF13377 Periplasmic binding protein-like domain 171 331 8.9E-43 T 12-10-2018 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 Gene3D G3DSA:3.40.50.2300 70 323 8.7E-89 T 12-10-2018 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 SUPERFAMILY SSF53822 61 333 2.17E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.2E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 SUPERFAMILY SSF47413 1 60 1.35E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 K04M3_43420 58a63f24d8ad562dc03477f1de1bef9c 340 SMART SM00354 1 72 6.3E-34 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 Pfam PF00245 Alkaline phosphatase 26 503 2.9E-83 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 3.2E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 3.2E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 3.2E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 3.2E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 3.2E-37 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 Gene3D G3DSA:3.40.720.10 24 382 2.4E-140 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 Gene3D G3DSA:3.40.720.10 462 525 2.2E-7 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 SMART SM00098 27 431 7.1E-51 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 Gene3D G3DSA:1.10.1200.140 388 444 5.1E-28 T 12-10-2018 K04M3_22070 3d00efd45310cbede4ffb69b46ae42e0 525 SUPERFAMILY SSF53649 9 504 1.11E-113 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_02760 9a792ab9bfe665f5279fa396abd19e70 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02760 9a792ab9bfe665f5279fa396abd19e70 101 SUPERFAMILY SSF57716 2 101 7.84E-37 T 12-10-2018 K04M3_02760 9a792ab9bfe665f5279fa396abd19e70 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02760 9a792ab9bfe665f5279fa396abd19e70 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.619 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid K04M3_02760 9a792ab9bfe665f5279fa396abd19e70 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 12-10-2018 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 Gene3D G3DSA:3.10.290.10 1 61 1.5E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 Gene3D G3DSA:3.30.70.1560 127 210 2.9E-56 T 12-10-2018 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 6.9E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 Pfam PF01479 S4 domain 1 47 3.8E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 9.6E-48 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 SUPERFAMILY SSF55174 1 81 3.39E-12 T 12-10-2018 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 SMART SM00363 1 59 8.7E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 Gene3D G3DSA:3.30.70.580 62 228 2.9E-56 T 12-10-2018 K04M3_11770 f2b02705cdc808da7caa32404ed5cd54 233 SUPERFAMILY SSF55120 60 228 2.08E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_11830 cc09422a286b14f6dc2cc338a2025649 817 Pfam PF02687 FtsX-like permease family 269 368 8.6E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_11830 cc09422a286b14f6dc2cc338a2025649 817 Pfam PF02687 FtsX-like permease family 715 809 1.4E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_12880 7cfdf306cd59b342b3075e63619728f5 657 SUPERFAMILY SSF56563 387 655 6.15E-38 T 12-10-2018 K04M3_12880 7cfdf306cd59b342b3075e63619728f5 657 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 361 653 6.4E-28 T 12-10-2018 IPR024455 Phage capsid K04M3_12880 7cfdf306cd59b342b3075e63619728f5 657 Pfam PF04586 Caudovirus prohead serine protease 73 170 2.7E-7 T 12-10-2018 IPR006433 Prohead protease K04M3_12880 7cfdf306cd59b342b3075e63619728f5 657 Pfam PF05065 Phage capsid family 396 653 3.2E-37 T 12-10-2018 IPR024455 Phage capsid K04M3_24060 ae7a0e481efe8887c39279b30f66f16d 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 339 2.9E-135 T 12-10-2018 IPR021936 Protein of unknown function DUF3549 K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 4.0E-29 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 Gene3D G3DSA:2.60.40.10 357 473 5.2E-48 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 SUPERFAMILY SSF54862 107 343 5.79E-33 T 12-10-2018 K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 2.0E-41 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_32050 577a9d9487e95a09d35b46a0f3b43f68 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.7E-173 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 K04M3_34860 59fa09df10f86f648b6dfb8c8ef24d77 165 Pfam PF05229 Spore Coat Protein U domain 12 162 1.1E-31 T 12-10-2018 IPR007893 Spore coat protein U K04M3_34860 59fa09df10f86f648b6dfb8c8ef24d77 165 SMART SM00972 105 162 9.2E-4 T 12-10-2018 IPR007893 Spore coat protein U K04M3_17130 5648ffe40fd275491cdf9bb069049a7b 171 Gene3D G3DSA:3.40.50.300 1 166 1.2E-9 T 12-10-2018 K04M3_17130 5648ffe40fd275491cdf9bb069049a7b 171 SUPERFAMILY SSF52540 3 168 2.24E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11640 b05858d48a6bcb001101b0bd86f56b5b 215 SMART SM00382 28 214 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_11640 b05858d48a6bcb001101b0bd86f56b5b 215 Gene3D G3DSA:3.40.50.300 1 204 1.2E-52 T 12-10-2018 K04M3_11640 b05858d48a6bcb001101b0bd86f56b5b 215 SUPERFAMILY SSF52540 10 199 1.13E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11640 b05858d48a6bcb001101b0bd86f56b5b 215 Pfam PF00005 ABC transporter 22 163 3.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 SUPERFAMILY SSF49503 158 277 8.27E-17 T 12-10-2018 IPR008972 Cupredoxin K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 5.4E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Pfam PF00394 Multicopper oxidase 197 281 5.1E-9 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Gene3D G3DSA:2.60.40.420 160 303 3.5E-23 T 12-10-2018 IPR008972 Cupredoxin K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Pfam PF07731 Multicopper oxidase 363 459 5.5E-26 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 SUPERFAMILY SSF49503 32 155 4.22E-39 T 12-10-2018 IPR008972 Cupredoxin K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Pfam PF07732 Multicopper oxidase 45 156 1.7E-38 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Gene3D G3DSA:2.60.40.420 308 460 1.1E-36 T 12-10-2018 IPR008972 Cupredoxin K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 Gene3D G3DSA:2.60.40.420 9 153 3.1E-45 T 12-10-2018 IPR008972 Cupredoxin K04M3_31740 4afe5683a0ab89dfb36f7c11857aad5e 460 SUPERFAMILY SSF49503 311 459 7.18E-34 T 12-10-2018 IPR008972 Cupredoxin K04M3_33500 0d2a0b091fb88d406605c12dbe95ff25 338 Gene3D G3DSA:3.10.450.50 5 150 4.0E-22 T 12-10-2018 K04M3_33500 0d2a0b091fb88d406605c12dbe95ff25 338 Gene3D G3DSA:3.10.450.50 203 332 1.9E-11 T 12-10-2018 K04M3_33500 0d2a0b091fb88d406605c12dbe95ff25 338 Pfam PF12680 SnoaL-like domain 11 132 1.2E-9 T 12-10-2018 IPR037401 SnoaL-like domain K04M3_33500 0d2a0b091fb88d406605c12dbe95ff25 338 SUPERFAMILY SSF54427 185 328 1.62E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_33500 0d2a0b091fb88d406605c12dbe95ff25 338 SUPERFAMILY SSF54427 5 153 5.01E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_49330 83c5ac32169456eef800d9e6260be4c5 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.723 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_49330 83c5ac32169456eef800d9e6260be4c5 408 Pfam PF03616 Sodium/glutamate symporter 7 376 1.2E-150 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_49330 83c5ac32169456eef800d9e6260be4c5 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 3.8E-135 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 K04M3_10070 4df9ee10304aa2c5605206559cf81c7d 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 2.7E-33 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 K04M3_10070 4df9ee10304aa2c5605206559cf81c7d 233 PIRSF PIRSF037208 1 233 1.1E-88 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 K04M3_10070 4df9ee10304aa2c5605206559cf81c7d 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 36.836 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 K04M3_10070 4df9ee10304aa2c5605206559cf81c7d 233 SUPERFAMILY SSF55729 79 231 8.02E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_10070 4df9ee10304aa2c5605206559cf81c7d 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 1.3E-18 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 5.0E-72 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 Gene3D G3DSA:3.30.930.10 1 203 3.0E-64 T 12-10-2018 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 1.1E-7 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 PIRSF PIRSF016262 1 216 1.3E-62 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 SUPERFAMILY SSF55681 2 204 2.73E-70 T 12-10-2018 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 12-10-2018 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.819 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 K04M3_06930 0790ffd42438ba66d6a1a6a13abbbe1f 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 K04M3_05490 40b2d4cced2724acd4cf49ca62562ca1 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 2.7E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_05490 40b2d4cced2724acd4cf49ca62562ca1 734 SUPERFAMILY SSF161098 426 529 1.07E-6 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_05490 40b2d4cced2724acd4cf49ca62562ca1 734 SUPERFAMILY SSF161098 502 720 7.85E-19 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_05490 40b2d4cced2724acd4cf49ca62562ca1 734 Gene3D G3DSA:1.10.3720.10 496 731 2.2E-22 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_52090 fa5886b72e62538288eea153c873bb7b 326 Pfam PF01145 SPFH domain / Band 7 family 53 237 1.6E-14 T 12-10-2018 IPR001107 Band 7 domain K04M3_52090 fa5886b72e62538288eea153c873bb7b 326 SUPERFAMILY SSF117892 62 142 4.84E-7 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_52090 fa5886b72e62538288eea153c873bb7b 326 SMART SM00244 24 223 5.3E-4 T 12-10-2018 IPR001107 Band 7 domain K04M3_52090 fa5886b72e62538288eea153c873bb7b 326 PIRSF PIRSF005651 2 326 4.4E-56 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 K04M3_52090 fa5886b72e62538288eea153c873bb7b 326 TIGRFAM TIGR01932 hflC: HflC protein 12 322 2.6E-60 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 K04M3_52090 fa5886b72e62538288eea153c873bb7b 326 SUPERFAMILY SSF117892 169 229 3.79E-5 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 7.3E-155 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.915 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.7E-101 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 Gene3D G3DSA:3.20.20.70 2 316 1.1E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_44890 d70b4f3feef540026160dd3a25db13ad 316 SUPERFAMILY SSF51569 1 315 2.41E-114 T 12-10-2018 K04M3_40610 b805b11cc7d46c4d8b86992d76f88f65 53 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 6.0E-18 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 K04M3_40610 b805b11cc7d46c4d8b86992d76f88f65 53 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 17.448 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 K04M3_40610 b805b11cc7d46c4d8b86992d76f88f65 53 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 4.1E-25 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 SUPERFAMILY SSF55073 115 257 3.77E-26 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 SMART SM00267 99 262 3.2E-7 T 12-10-2018 IPR000160 GGDEF domain K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 Pfam PF00563 EAL domain 280 513 4.4E-57 T 12-10-2018 IPR001633 EAL domain K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 112 257 4.7E-16 T 12-10-2018 IPR000160 GGDEF domain K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 112 257 4.2E-22 T 12-10-2018 IPR000160 GGDEF domain K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 SMART SM00052 271 519 7.7E-58 T 12-10-2018 IPR001633 EAL domain K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 SUPERFAMILY SSF141868 280 523 3.53E-65 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 Gene3D G3DSA:3.30.70.270 104 261 3.7E-27 T 12-10-2018 K04M3_51620 ce45dada34fa2d3bb7835145daf16c46 539 Gene3D G3DSA:3.20.20.450 276 528 8.8E-68 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_01290 31ae65e6152693393bca01ec604044e5 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 248 2.4E-58 T 12-10-2018 IPR022792 Type II secretion system, protein N K04M3_31050 1b6b48ab0b7ad075b084f1e581971a54 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.3E-19 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 K04M3_24850 4dfd62fda557695e9db38fc8c10e9550 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 300 4.2E-46 T 12-10-2018 IPR000160 GGDEF domain K04M3_24850 4dfd62fda557695e9db38fc8c10e9550 306 Gene3D G3DSA:3.30.70.270 131 303 1.5E-50 T 12-10-2018 K04M3_24850 4dfd62fda557695e9db38fc8c10e9550 306 SUPERFAMILY SSF55073 146 302 1.8E-43 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_24850 4dfd62fda557695e9db38fc8c10e9550 306 SMART SM00267 130 301 7.4E-53 T 12-10-2018 IPR000160 GGDEF domain K04M3_24850 4dfd62fda557695e9db38fc8c10e9550 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 4.6E-44 T 12-10-2018 IPR000160 GGDEF domain K04M3_21900 a1a644085857223a9d72c21f470062d4 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 Pfam PF00106 short chain dehydrogenase 3 190 1.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_21900 a1a644085857223a9d72c21f470062d4 229 SUPERFAMILY SSF51735 3 229 2.91E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_21900 a1a644085857223a9d72c21f470062d4 229 Gene3D G3DSA:3.40.50.720 1 229 5.1E-62 T 12-10-2018 K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 Gene3D G3DSA:2.40.40.10 83 177 6.6E-39 T 12-10-2018 IPR036908 RlpA-like domain superfamily K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 Pfam PF03330 Lytic transglycolase 84 173 2.8E-28 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 SUPERFAMILY SSF50685 89 175 3.35E-11 T 12-10-2018 IPR036908 RlpA-like domain superfamily K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 Pfam PF05036 Sporulation related domain 190 260 2.2E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.236 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 Gene3D G3DSA:3.30.70.1070 192 263 1.9E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 SUPERFAMILY SSF110997 190 262 1.7E-12 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_06960 240757cfd54847cde8fd70a16626f6f4 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 2.9E-47 T 12-10-2018 IPR012997 Rare lipoprotein A K04M3_25750 5463ffe78b48661f2f00d5800cb5e08f 340 Gene3D G3DSA:2.40.160.10 22 340 1.2E-65 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_25750 5463ffe78b48661f2f00d5800cb5e08f 340 Pfam PF13609 Gram-negative porin 10 304 2.2E-25 T 12-10-2018 K04M3_25750 5463ffe78b48661f2f00d5800cb5e08f 340 SUPERFAMILY SSF56935 22 340 2.52E-52 T 12-10-2018 K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 SMART SM01001 1 152 5.0E-104 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 Pfam PF00731 AIR carboxylase 2 150 5.5E-65 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 2.5E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 SUPERFAMILY SSF52255 2 158 1.03E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 Gene3D G3DSA:3.40.50.7700 1 161 1.8E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.534 T 12-10-2018 IPR033747 Class I PurE K04M3_31890 d76fa6aad9a61eea449ff2ab2f3413b1 161 PIRSF PIRSF001338 1 160 2.4E-68 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 K04M3_39490 0d3afbdfd06a9315849e41297c53cf4c 153 Pfam PF11753 Protein of unknwon function (DUF3310) 81 145 7.8E-15 T 12-10-2018 IPR021739 SaV-like K04M3_42190 5486ac270c533beac4f0db64b5587f8d 272 Gene3D G3DSA:3.40.190.10 32 249 1.1E-61 T 12-10-2018 K04M3_42190 5486ac270c533beac4f0db64b5587f8d 272 SMART SM00062 39 262 5.1E-45 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_42190 5486ac270c533beac4f0db64b5587f8d 272 Gene3D G3DSA:3.40.190.10 125 216 1.1E-61 T 12-10-2018 K04M3_42190 5486ac270c533beac4f0db64b5587f8d 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 4.2E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_42190 5486ac270c533beac4f0db64b5587f8d 272 SUPERFAMILY SSF53850 7 259 1.03E-57 T 12-10-2018 K04M3_42190 5486ac270c533beac4f0db64b5587f8d 272 SMART SM00079 39 261 0.0042 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 Gene3D G3DSA:3.60.20.40 388 575 1.4E-46 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 Gene3D G3DSA:1.10.246.130 266 387 3.5E-30 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 Pfam PF01019 Gamma-glutamyltranspeptidase 49 570 4.6E-139 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 469 486 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 459 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 249 265 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 426 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 7.4E-57 T 12-10-2018 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 568 1.6E-114 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 K04M3_03880 a5018777e6cff8c67bfc5c027799ca57 576 SUPERFAMILY SSF56235 27 570 1.72E-144 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_33560 579ab5ba3fc9ea311b5976ae38bc8609 269 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 200 4.8E-42 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 SUPERFAMILY SSF48695 37 470 1.36E-162 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 Gene3D G3DSA:1.20.140.10 309 451 2.9E-186 T 12-10-2018 K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.043 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 36 473 2.8E-247 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 Pfam PF02335 Cytochrome c552 41 470 1.8E-178 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 Gene3D G3DSA:1.10.1130.10 40 469 2.9E-186 T 12-10-2018 K04M3_19880 fc99fb9459d7c238b4be2f4ae72539f8 475 PIRSF PIRSF000243 24 474 1.2E-124 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Pfam PF08279 HTH domain 9 60 1.6E-13 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 SUPERFAMILY SSF46785 6 61 1.89E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 SUPERFAMILY SSF55681 70 269 2.73E-59 T 12-10-2018 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Gene3D G3DSA:1.10.10.10 2 65 5.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 4.5E-66 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Gene3D G3DSA:3.30.930.10 67 271 3.9E-65 T 12-10-2018 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 SUPERFAMILY SSF50037 272 318 4.26E-10 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 5.7E-20 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Gene3D G3DSA:2.30.30.100 272 314 1.3E-16 T 12-10-2018 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.462 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 K04M3_30660 45052cde2396b68202f7d59cfac5a539 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 1.4E-8 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_12840 42d4501e0c288bbe2c5f44be0d79fdf9 189 Gene3D G3DSA:1.10.10.10 2 68 4.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_12840 42d4501e0c288bbe2c5f44be0d79fdf9 189 Pfam PF07471 Phage DNA packaging protein Nu1 3 125 1.9E-8 T 12-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit K04M3_33040 0e05a2aa1ed86cb0d4df0553bd450c4b 195 Gene3D G3DSA:3.40.630.30 11 191 3.5E-33 T 12-10-2018 K04M3_33040 0e05a2aa1ed86cb0d4df0553bd450c4b 195 Pfam PF13302 Acetyltransferase (GNAT) domain 18 162 2.7E-17 T 12-10-2018 IPR000182 GNAT domain K04M3_33040 0e05a2aa1ed86cb0d4df0553bd450c4b 195 SUPERFAMILY SSF55729 15 186 9.25E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_52480 812e2c7763912eb6386d4de9ebbc5c82 582 Gene3D G3DSA:3.40.50.300 56 263 8.1E-7 T 12-10-2018 K04M3_52480 812e2c7763912eb6386d4de9ebbc5c82 582 SUPERFAMILY SSF52540 83 244 2.88E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_03070 5c5a4c0182f55e80744e87640ac20f8f 221 Pfam PF10986 Protein of unknown function (DUF2796) 132 216 6.0E-19 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 K04M3_03070 5c5a4c0182f55e80744e87640ac20f8f 221 Pfam PF10986 Protein of unknown function (DUF2796) 28 142 1.0E-30 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 K04M3_13550 0f9bac05caa2686eb0ba3352c4be4943 149 Pfam PF12680 SnoaL-like domain 10 117 6.5E-7 T 12-10-2018 IPR037401 SnoaL-like domain K04M3_13550 0f9bac05caa2686eb0ba3352c4be4943 149 SUPERFAMILY SSF54427 4 125 1.01E-18 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_13550 0f9bac05caa2686eb0ba3352c4be4943 149 Gene3D G3DSA:3.10.450.50 5 126 6.6E-15 T 12-10-2018 K04M3_46410 c085c4492add4435708382a5309f7c07 355 SUPERFAMILY SSF53850 49 348 2.63E-47 T 12-10-2018 K04M3_46410 c085c4492add4435708382a5309f7c07 355 Pfam PF13343 Bacterial extracellular solute-binding protein 92 316 4.9E-34 T 12-10-2018 K04M3_46410 c085c4492add4435708382a5309f7c07 355 Gene3D G3DSA:3.40.190.10 141 323 8.7E-36 T 12-10-2018 K04M3_46410 c085c4492add4435708382a5309f7c07 355 Gene3D G3DSA:3.40.190.10 67 318 8.7E-36 T 12-10-2018 K04M3_34690 8766625e785615cd3a6491f4b3acf72d 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 246 51.927 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 K04M3_34690 8766625e785615cd3a6491f4b3acf72d 251 SUPERFAMILY SSF89550 5 245 6.67E-60 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 K04M3_34690 8766625e785615cd3a6491f4b3acf72d 251 SMART SM00481 6 80 9.3E-8 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal K04M3_34690 8766625e785615cd3a6491f4b3acf72d 251 Gene3D G3DSA:3.20.20.140 3 248 1.2E-61 T 12-10-2018 K04M3_02180 f03f93c7c3117bae1b24671733614986 298 SUPERFAMILY SSF53448 6 232 2.81E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_02180 f03f93c7c3117bae1b24671733614986 298 Pfam PF00535 Glycosyl transferase family 2 7 165 9.4E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_02180 f03f93c7c3117bae1b24671733614986 298 Gene3D G3DSA:3.90.550.10 5 194 1.2E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_42600 4266776af6f3933d5e8e251eb0269c0f 481 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 86 363 1.5E-5 T 12-10-2018 K04M3_42600 4266776af6f3933d5e8e251eb0269c0f 481 Gene3D G3DSA:1.50.10.10 29 426 1.1E-19 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 K04M3_42600 4266776af6f3933d5e8e251eb0269c0f 481 SUPERFAMILY SSF48208 26 444 2.3E-52 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 SUPERFAMILY SSF55073 156 316 2.28E-42 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 5.0E-41 T 12-10-2018 IPR000160 GGDEF domain K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 314 1.2E-43 T 12-10-2018 IPR000160 GGDEF domain K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 SUPERFAMILY SSF52172 6 156 2.85E-37 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 Pfam PF00072 Response regulator receiver domain 10 117 1.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 SMART SM00267 140 316 3.0E-47 T 12-10-2018 IPR000160 GGDEF domain K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 Gene3D G3DSA:3.30.70.270 141 317 4.1E-50 T 12-10-2018 K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 SMART SM00448 8 120 5.9E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_40510 72c1b25f356609c282142d8e3c0f9bf7 319 Gene3D G3DSA:3.40.50.2300 1 140 8.7E-33 T 12-10-2018 K04M3_19110 485d6bfe7ad967664903f1ec73c44e79 86 Pfam PF13737 Transposase DDE domain 1 70 1.4E-24 T 12-10-2018 IPR025668 Transposase DDE domain K04M3_32390 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_32390 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_32390 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_32390 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_32390 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_05100 39ad921b750b8755c22c3999bf68e310 90 SUPERFAMILY SSF54403 5 56 1.11E-7 T 12-10-2018 K04M3_32740 dbea9661d7907ae92d9422e478354ea4 177 Gene3D G3DSA:3.40.630.30 2 171 8.8E-35 T 12-10-2018 K04M3_32740 dbea9661d7907ae92d9422e478354ea4 177 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 1.2E-24 T 12-10-2018 IPR000182 GNAT domain K04M3_32740 dbea9661d7907ae92d9422e478354ea4 177 SUPERFAMILY SSF55729 2 171 9.05E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 Gene3D G3DSA:1.10.10.60 223 336 1.9E-23 T 12-10-2018 K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 202 6.0E-20 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 SUPERFAMILY SSF46689 280 331 1.25E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 1.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 1.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 SMART SM00342 245 327 4.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_46170 2bf59cfbd989ecd9cd7bf1d71ec8332a 340 Pfam PF12833 Helix-turn-helix domain 251 328 4.1E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.1E-118 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 SUPERFAMILY SSF160544 244 351 9.55E-36 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 4.0E-118 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.8E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_34510 6a7550ddf4fbcb5e82c40bd598ac101a 375 Gene3D G3DSA:3.40.1690.10 217 358 4.4E-52 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal K04M3_32810 ddb581a91473d693bffbf6bc9d7826ab 230 SUPERFAMILY SSF50800 3 227 3.92E-71 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily K04M3_32810 ddb581a91473d693bffbf6bc9d7826ab 230 Gene3D G3DSA:2.40.33.20 1 230 1.7E-68 T 12-10-2018 K04M3_32810 ddb581a91473d693bffbf6bc9d7826ab 230 Pfam PF03475 3-alpha domain 173 215 8.8E-10 T 12-10-2018 IPR005163 3-alpha domain K04M3_32810 ddb581a91473d693bffbf6bc9d7826ab 230 Pfam PF03473 MOSC domain 49 163 6.0E-22 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 SMART SM00448 563 677 5.5E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 Pfam PF00072 Response regulator receiver domain 565 677 1.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 Gene3D G3DSA:1.10.287.130 168 258 1.9E-5 T 12-10-2018 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 Gene3D G3DSA:3.30.565.10 259 412 8.2E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 SUPERFAMILY SSF55874 250 415 1.7E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 Gene3D G3DSA:3.40.50.2300 554 681 3.5E-36 T 12-10-2018 K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 SUPERFAMILY SSF52172 561 681 5.27E-35 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 SMART SM00387 305 413 8.5E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 412 2.9E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_42950 830b81a366d68ea860b0d8a4b048100f 681 SUPERFAMILY SSF47384 171 233 3.14E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_12350 143702026d74d13329dd630bb3399903 325 Pfam PF11383 Protein of unknown function (DUF3187) 10 322 5.2E-121 T 12-10-2018 IPR021523 Protein of unknown function DUF3187 K04M3_01910 c41bb23f48eb9adb6c0b5bae04364b29 351 Gene3D G3DSA:3.40.50.2000 1 149 2.3E-53 T 12-10-2018 K04M3_01910 c41bb23f48eb9adb6c0b5bae04364b29 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 325 3.7E-70 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 K04M3_01910 c41bb23f48eb9adb6c0b5bae04364b29 351 SUPERFAMILY SSF53756 1 343 1.88E-98 T 12-10-2018 K04M3_01910 c41bb23f48eb9adb6c0b5bae04364b29 351 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 4.4E-150 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 K04M3_01910 c41bb23f48eb9adb6c0b5bae04364b29 351 Gene3D G3DSA:3.40.50.2000 165 345 1.7E-60 T 12-10-2018 K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 SMART SM00862 149 225 7.0E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 SUPERFAMILY SSF52172 1 127 1.57E-39 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 SMART SM00448 2 111 1.9E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 SUPERFAMILY SSF46894 125 226 2.07E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 2.8E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 Gene3D G3DSA:1.10.10.10 128 229 1.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_30000 83bb81318c19476ee6f1a1918e6ef4dc 229 Gene3D G3DSA:3.40.50.2300 1 127 7.5E-37 T 12-10-2018 K04M3_24950 6b39cdc1e914ee8fcc5dcab76f12b1cf 594 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 206 333 8.7E-34 T 12-10-2018 K04M3_24950 6b39cdc1e914ee8fcc5dcab76f12b1cf 594 Gene3D G3DSA:3.30.565.10 195 399 2.4E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_24950 6b39cdc1e914ee8fcc5dcab76f12b1cf 594 SUPERFAMILY SSF55874 208 346 5.11E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 Gene3D G3DSA:3.40.50.2300 451 590 2.5E-32 T 12-10-2018 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 SUPERFAMILY SSF55874 275 443 1.7E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 443 1.2E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 286 3.7E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 SMART SM00388 221 286 1.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 SMART SM00387 334 447 8.4E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 Gene3D G3DSA:3.30.565.10 285 450 9.1E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 Gene3D G3DSA:1.10.287.130 192 284 7.7E-27 T 12-10-2018 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 8.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 8.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 8.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 8.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 SUPERFAMILY SSF52172 465 585 9.39E-31 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 SUPERFAMILY SSF47384 207 287 7.06E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 SMART SM00448 466 578 3.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_18720 9af6fa6cb72e7a5ac4c78a85f6f97c1d 596 Pfam PF00072 Response regulator receiver domain 468 578 2.1E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_00140 866ffbe8c32bc080c90950a31ef19b89 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.0E-22 T 12-10-2018 IPR001455 TusA-like domain K04M3_00140 866ffbe8c32bc080c90950a31ef19b89 82 SUPERFAMILY SSF64307 10 80 6.41E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily K04M3_00140 866ffbe8c32bc080c90950a31ef19b89 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain K04M3_00140 866ffbe8c32bc080c90950a31ef19b89 82 Gene3D G3DSA:3.30.110.40 5 80 1.1E-28 T 12-10-2018 IPR036868 TusA-like domain superfamily K04M3_00140 866ffbe8c32bc080c90950a31ef19b89 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 29.019 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 K04M3_11530 0033841bc4f92c06d3e70b657d8d523f 309 Pfam PF00561 alpha/beta hydrolase fold 33 180 3.5E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_11530 0033841bc4f92c06d3e70b657d8d523f 309 Gene3D G3DSA:3.40.50.1820 26 309 2.8E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_11530 0033841bc4f92c06d3e70b657d8d523f 309 SUPERFAMILY SSF53474 28 305 3.12E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 Pfam PF00155 Aminotransferase class I and II 148 448 1.1E-34 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 Gene3D G3DSA:3.90.1150.10 100 467 1.6E-94 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 SUPERFAMILY SSF53383 96 470 1.25E-91 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 Gene3D G3DSA:1.10.10.10 3 69 2.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 SMART SM00345 9 68 4.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 7.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 Gene3D G3DSA:3.40.640.10 143 362 1.6E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_43890 3cc2f3a14d86a9ada140e3310d480bde 473 SUPERFAMILY SSF46785 4 70 1.47E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_40380 c9cdb5a04e25ff5438acb67ec2f58d2f 706 Pfam PF03477 ATP cone domain 4 89 3.3E-22 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 K04M3_40380 c9cdb5a04e25ff5438acb67ec2f58d2f 706 SUPERFAMILY SSF51998 121 687 3.05E-192 T 12-10-2018 K04M3_40380 c9cdb5a04e25ff5438acb67ec2f58d2f 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 6.0E-199 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 K04M3_40380 c9cdb5a04e25ff5438acb67ec2f58d2f 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.6E-180 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 K04M3_40380 c9cdb5a04e25ff5438acb67ec2f58d2f 706 Gene3D G3DSA:3.20.70.20 121 687 9.0E-232 T 12-10-2018 K04M3_40380 c9cdb5a04e25ff5438acb67ec2f58d2f 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site K04M3_02560 b1d012196f7fbcac2381333e69a662ae 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.029 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 K04M3_02560 b1d012196f7fbcac2381333e69a662ae 183 SUPERFAMILY SSF56235 2 172 1.02E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_02560 b1d012196f7fbcac2381333e69a662ae 183 Gene3D G3DSA:3.60.20.10 1 173 2.8E-67 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_02560 b1d012196f7fbcac2381333e69a662ae 183 PIRSF PIRSF039093 1 175 2.9E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 K04M3_02560 b1d012196f7fbcac2381333e69a662ae 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.5E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 K04M3_02560 b1d012196f7fbcac2381333e69a662ae 183 Pfam PF00227 Proteasome subunit 2 169 1.4E-23 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 K04M3_39610 af91c2124ff81f64d104b9dc83b39916 195 Pfam PF17212 Tail tubular protein 15 177 9.1E-40 T 12-10-2018 IPR033767 Tail tubular protein Gp11 K04M3_39090 71c7ce0b811a0c2a1993c1ef9820dfe6 264 SUPERFAMILY SSF144059 3 257 1.09E-82 T 12-10-2018 K04M3_39090 71c7ce0b811a0c2a1993c1ef9820dfe6 264 Gene3D G3DSA:1.25.40.10 1 86 8.0E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_39090 71c7ce0b811a0c2a1993c1ef9820dfe6 264 PIRSF PIRSF029288 1 263 2.8E-86 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type K04M3_39090 71c7ce0b811a0c2a1993c1ef9820dfe6 264 Pfam PF07024 ImpE protein 138 257 3.0E-34 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type K04M3_43110 e504e83b65bb96496f20675eef0714f4 192 Pfam PF14316 Domain of unknown function (DUF4381) 15 164 8.3E-26 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 K04M3_21660 cb2410ddd47b474725bfb5cb318be901 138 Gene3D G3DSA:3.10.180.10 3 135 8.0E-51 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_21660 cb2410ddd47b474725bfb5cb318be901 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 2.0E-24 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_21660 cb2410ddd47b474725bfb5cb318be901 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 6.9E-69 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 K04M3_21660 cb2410ddd47b474725bfb5cb318be901 138 SUPERFAMILY SSF54593 3 130 9.4E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_21660 cb2410ddd47b474725bfb5cb318be901 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 K04M3_21660 cb2410ddd47b474725bfb5cb318be901 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 K04M3_19770 65cb31c0685d9a85ea2140e2a894793c 345 Gene3D G3DSA:1.20.1420.20 29 345 4.2E-74 T 12-10-2018 IPR038352 Imelysin-like domain superfamily K04M3_19770 65cb31c0685d9a85ea2140e2a894793c 345 Pfam PF09375 Imelysin 47 324 1.3E-42 T 12-10-2018 IPR018976 Imelysin-like domain K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 Gene3D G3DSA:1.10.10.10 1 92 6.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 Pfam PF03466 LysR substrate binding domain 85 281 3.9E-17 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 SUPERFAMILY SSF46785 3 81 1.58E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 SUPERFAMILY SSF53850 86 284 1.32E-20 T 12-10-2018 K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 Gene3D G3DSA:3.40.190.10 158 252 2.7E-38 T 12-10-2018 K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46970 71c54b98bbf09b6a18af1f71323c1d7f 296 Gene3D G3DSA:3.40.190.10 98 277 2.7E-38 T 12-10-2018 K04M3_29720 806a2c2903bd0354f3a4b6c8403bae14 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 9.0E-62 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 K04M3_29720 806a2c2903bd0354f3a4b6c8403bae14 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.837 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 K04M3_29720 806a2c2903bd0354f3a4b6c8403bae14 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 3.1E-88 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 K04M3_33260 d41aba30e2e429e4aa9d1b78a6ac85fb 322 SUPERFAMILY SSF81345 4 318 2.09E-80 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_33260 d41aba30e2e429e4aa9d1b78a6ac85fb 322 Pfam PF01032 FecCD transport family 12 318 1.6E-93 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_33260 d41aba30e2e429e4aa9d1b78a6ac85fb 322 Gene3D G3DSA:1.10.3470.10 1 321 2.9E-96 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 SUPERFAMILY SSF142695 205 367 1.57E-48 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 PIRSF PIRSF001259 3 369 5.6E-131 T 12-10-2018 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.4E-76 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.776 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Pfam PF00925 GTP cyclohydrolase II 207 367 8.4E-41 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.9E-85 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Gene3D G3DSA:3.90.870.10 1 205 9.3E-90 T 12-10-2018 K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 SUPERFAMILY SSF55821 3 202 2.22E-87 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily K04M3_06590 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Gene3D G3DSA:3.40.50.10990 206 368 9.0E-33 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 Gene3D G3DSA:3.90.76.10 66 172 9.8E-195 T 12-10-2018 K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 SUPERFAMILY SSF53850 42 544 4.52E-106 T 12-10-2018 K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 5.1E-75 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 PIRSF PIRSF002741 5 542 4.5E-66 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 Gene3D G3DSA:3.10.105.10 272 519 9.8E-195 T 12-10-2018 K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site K04M3_25870 6066f08e764bc405983d8f1e7bb13084 560 Gene3D G3DSA:3.40.190.10 46 543 9.8E-195 T 12-10-2018 K04M3_46000 4552b8a57ed1172720b6fe08450d232f 79 Gene3D G3DSA:1.20.58.660 11 78 2.7E-14 T 12-10-2018 K04M3_46000 4552b8a57ed1172720b6fe08450d232f 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 7.7E-11 T 12-10-2018 IPR007420 Protein of unknown function DUF465 K04M3_27880 aa6a5c75d02be2ddbb8a29b3277868e0 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 K04M3_27880 aa6a5c75d02be2ddbb8a29b3277868e0 129 Gene3D G3DSA:3.30.1330.40 1 129 2.2E-47 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_27880 aa6a5c75d02be2ddbb8a29b3277868e0 129 SUPERFAMILY SSF55298 2 128 7.38E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_27880 aa6a5c75d02be2ddbb8a29b3277868e0 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 4.4E-53 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 K04M3_27880 aa6a5c75d02be2ddbb8a29b3277868e0 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.3E-44 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 K04M3_40500 f14d15b00092d06cb7f567814d951402 145 Gene3D G3DSA:1.10.3440.10 3 144 4.7E-5 T 12-10-2018 IPR023132 Sama2622-like superfamily K04M3_40500 f14d15b00092d06cb7f567814d951402 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 5.2E-53 T 12-10-2018 IPR021422 Protein of unknown function DUF3069 K04M3_40500 f14d15b00092d06cb7f567814d951402 145 SUPERFAMILY SSF158675 1 145 2.22E-52 T 12-10-2018 IPR023132 Sama2622-like superfamily K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 Pfam PF03466 LysR substrate binding domain 94 288 6.8E-24 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 Gene3D G3DSA:1.10.10.10 6 96 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 SUPERFAMILY SSF46785 3 84 3.33E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 Gene3D G3DSA:3.40.190.10 162 260 6.2E-42 T 12-10-2018 K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 9.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 Gene3D G3DSA:3.40.190.10 102 285 6.2E-42 T 12-10-2018 K04M3_47310 5cb84af01c86b213de23b0a7016ddfd3 289 SUPERFAMILY SSF53850 89 287 8.87E-27 T 12-10-2018 K04M3_35490 ef3f24a04893fa6888857125379cfe6d 282 SUPERFAMILY SSF50182 96 169 5.23E-10 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_35490 ef3f24a04893fa6888857125379cfe6d 282 Pfam PF00924 Mechanosensitive ion channel 57 184 1.3E-15 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 K04M3_45550 5fdf98c998b062ada83e72e1ad099ad3 440 SUPERFAMILY SSF56112 98 325 7.35E-17 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_45550 5fdf98c998b062ada83e72e1ad099ad3 440 Pfam PF03109 ABC1 family 115 230 4.0E-29 T 12-10-2018 IPR004147 UbiB domain K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.8E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 Gene3D G3DSA:3.30.450.40 7 175 3.9E-14 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 SUPERFAMILY SSF52540 193 437 3.5E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 9.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 9.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 Gene3D G3DSA:1.10.10.60 448 509 5.2E-10 T 12-10-2018 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 SMART SM00382 214 358 4.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 Gene3D G3DSA:3.40.50.300 180 364 6.0E-64 T 12-10-2018 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 Gene3D G3DSA:1.10.8.60 365 430 4.2E-15 T 12-10-2018 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 SUPERFAMILY SSF55781 7 163 1.5E-17 T 12-10-2018 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 SUPERFAMILY SSF46689 459 507 9.41E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 Pfam PF00158 Sigma-54 interaction domain 195 361 1.4E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_11610 c42b9ccacfb5ed492dfaaeca5a6b821e 509 SMART SM00065 21 170 1.2E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 K04M3_21110 5053b77c0a79fd0bc880a6f7a3fcf35f 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.948 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_21110 5053b77c0a79fd0bc880a6f7a3fcf35f 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 6.2E-146 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_21110 5053b77c0a79fd0bc880a6f7a3fcf35f 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 7.1E-32 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_21110 5053b77c0a79fd0bc880a6f7a3fcf35f 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.0E-34 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_21110 5053b77c0a79fd0bc880a6f7a3fcf35f 316 SUPERFAMILY SSF53901 3 315 5.91E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_21110 5053b77c0a79fd0bc880a6f7a3fcf35f 316 Gene3D G3DSA:3.40.47.10 1 316 5.6E-128 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 SUPERFAMILY SSF56935 22 324 8.85E-53 T 12-10-2018 K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 Gene3D G3DSA:2.40.160.10 22 324 1.3E-68 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 310 324 6.2E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 6.2E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.2E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.2E-8 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 K04M3_16880 b32ae0d92fb37d23cbe6188deb0f8183 324 Pfam PF00267 Gram-negative porin 32 317 1.1E-25 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 K04M3_44910 798045cc0cd65f04d508c8380668c301 520 Pfam PF08447 PAS fold 31 114 5.3E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 K04M3_44910 798045cc0cd65f04d508c8380668c301 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 112 2.8E-13 T 12-10-2018 IPR000014 PAS domain K04M3_44910 798045cc0cd65f04d508c8380668c301 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 484 9.2E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_44910 798045cc0cd65f04d508c8380668c301 520 SUPERFAMILY SSF55785 18 114 1.68E-25 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_44910 798045cc0cd65f04d508c8380668c301 520 SMART SM00091 8 75 0.0017 T 12-10-2018 IPR000014 PAS domain K04M3_44910 798045cc0cd65f04d508c8380668c301 520 Gene3D G3DSA:3.30.450.20 4 121 4.3E-24 T 12-10-2018 K04M3_44910 798045cc0cd65f04d508c8380668c301 520 Gene3D G3DSA:1.10.287.950 193 518 1.2E-54 T 12-10-2018 K04M3_44910 798045cc0cd65f04d508c8380668c301 520 SMART SM00283 257 518 5.3E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_44910 798045cc0cd65f04d508c8380668c301 520 SUPERFAMILY SSF58104 263 517 3.27E-58 T 12-10-2018 K04M3_48510 3702e45bacf4658aeb34b50b16ad64f5 461 SUPERFAMILY SSF111283 7 459 4.58E-113 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 K04M3_48510 3702e45bacf4658aeb34b50b16ad64f5 461 PIRSF PIRSF004919 1 461 2.4E-115 T 12-10-2018 IPR025502 TldD K04M3_48510 3702e45bacf4658aeb34b50b16ad64f5 461 Gene3D G3DSA:3.30.2290.10 3 221 5.0E-19 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal K04M3_48510 3702e45bacf4658aeb34b50b16ad64f5 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 1.0E-61 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 K04M3_33680 9681e09d7d6c7c0cb7b25286ce31a3f2 358 Gene3D G3DSA:3.40.50.300 103 263 3.5E-45 T 12-10-2018 K04M3_33680 9681e09d7d6c7c0cb7b25286ce31a3f2 358 Gene3D G3DSA:1.10.40.50 266 338 6.0E-21 T 12-10-2018 K04M3_33680 9681e09d7d6c7c0cb7b25286ce31a3f2 358 SUPERFAMILY SSF52540 107 324 8.25E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_33680 9681e09d7d6c7c0cb7b25286ce31a3f2 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.476 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 K04M3_33680 9681e09d7d6c7c0cb7b25286ce31a3f2 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 320 7.2E-51 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 K04M3_33680 9681e09d7d6c7c0cb7b25286ce31a3f2 358 Pfam PF03193 RsgA GTPase 91 263 1.3E-49 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 K04M3_29840 a3917d33680e6d370bf243976b986d9e 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 319 2.0E-44 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_29840 a3917d33680e6d370bf243976b986d9e 323 Gene3D G3DSA:3.30.930.10 1 322 8.4E-110 T 12-10-2018 K04M3_29840 a3917d33680e6d370bf243976b986d9e 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.254 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 K04M3_29840 a3917d33680e6d370bf243976b986d9e 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 7.0E-128 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 K04M3_29840 a3917d33680e6d370bf243976b986d9e 323 SUPERFAMILY SSF55681 10 320 2.11E-80 T 12-10-2018 K04M3_16160 f4702d8c6e8d955e1328b2204ed9f898 206 Gene3D G3DSA:1.10.760.10 46 206 9.3E-72 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_16160 f4702d8c6e8d955e1328b2204ed9f898 206 SUPERFAMILY SSF46626 21 202 3.93E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_16160 f4702d8c6e8d955e1328b2204ed9f898 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.5E-80 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO K04M3_16160 f4702d8c6e8d955e1328b2204ed9f898 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 3.9E-81 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO K04M3_36770 387c181d1bdc1498129741efb88952f3 507 Gene3D G3DSA:1.20.1730.10 6 485 1.1E-72 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_36770 387c181d1bdc1498129741efb88952f3 507 Pfam PF00474 Sodium:solute symporter family 34 416 8.1E-45 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_45160 04db79a8aabc3412545b140515b5bdbc 206 Pfam PF01810 LysE type translocator 15 205 1.5E-25 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_45160 04db79a8aabc3412545b140515b5bdbc 206 PIRSF PIRSF006324 1 206 1.2E-45 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.75 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 8.1E-37 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain K04M3_05640 4587fc8b736e03ae612d96d777822885 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.2E-82 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Gene3D G3DSA:3.30.70.3400 222 440 6.6E-51 T 12-10-2018 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.5E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Pfam PF02355 Protein export membrane protein 436 597 2.3E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial K04M3_05640 4587fc8b736e03ae612d96d777822885 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 4.2E-151 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 SUPERFAMILY SSF82866 413 609 5.23E-44 T 12-10-2018 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Gene3D G3DSA:1.20.1640.10 451 601 3.9E-7 T 12-10-2018 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 Gene3D G3DSA:3.30.1360.200 281 434 6.6E-51 T 12-10-2018 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 3.6E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_05640 4587fc8b736e03ae612d96d777822885 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 3.6E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 K04M3_37880 18515c144d79bb577f869509bc8a3303 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 480 2.6E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_37880 18515c144d79bb577f869509bc8a3303 516 SUPERFAMILY SSF58104 246 515 2.22E-70 T 12-10-2018 K04M3_37880 18515c144d79bb577f869509bc8a3303 516 Gene3D G3DSA:1.10.287.950 185 516 3.7E-62 T 12-10-2018 K04M3_37880 18515c144d79bb577f869509bc8a3303 516 Pfam PF08447 PAS fold 26 108 1.5E-18 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 K04M3_37880 18515c144d79bb577f869509bc8a3303 516 SUPERFAMILY SSF55785 15 108 2.23E-22 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_37880 18515c144d79bb577f869509bc8a3303 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 103 3.7E-10 T 12-10-2018 IPR000014 PAS domain K04M3_37880 18515c144d79bb577f869509bc8a3303 516 Gene3D G3DSA:3.30.450.20 3 110 2.8E-19 T 12-10-2018 K04M3_37880 18515c144d79bb577f869509bc8a3303 516 SMART SM00283 255 516 5.0E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_06940 11472fbb857a546d6605b1290d35c13f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.481 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 K04M3_06940 11472fbb857a546d6605b1290d35c13f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.3E-29 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 K04M3_06940 11472fbb857a546d6605b1290d35c13f 92 Gene3D G3DSA:3.30.70.260 6 92 2.4E-33 T 12-10-2018 K04M3_06940 11472fbb857a546d6605b1290d35c13f 92 SUPERFAMILY SSF117991 7 92 2.62E-31 T 12-10-2018 IPR027471 YbeD-like domain superfamily K04M3_33780 b92a1f1dc59671e473f592206cc7732c 686 SUPERFAMILY SSF51445 148 655 1.83E-93 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_33780 b92a1f1dc59671e473f592206cc7732c 686 Gene3D G3DSA:3.20.20.80 186 428 6.4E-56 T 12-10-2018 K04M3_33780 b92a1f1dc59671e473f592206cc7732c 686 Gene3D G3DSA:3.20.20.80 430 653 5.1E-38 T 12-10-2018 K04M3_33780 b92a1f1dc59671e473f592206cc7732c 686 SMART SM00642 203 646 1.0E-92 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33780 b92a1f1dc59671e473f592206cc7732c 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 6.0E-52 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_33780 b92a1f1dc59671e473f592206cc7732c 686 PIRSF PIRSF036917 1 685 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Gene3D G3DSA:3.40.50.720 1 118 1.2E-25 T 12-10-2018 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 SUPERFAMILY SSF52210 281 441 4.71E-40 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 SMART SM00881 7 102 4.2E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 SUPERFAMILY SSF52210 118 276 5.23E-32 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Gene3D G3DSA:3.40.630.30 713 882 2.2E-38 T 12-10-2018 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Gene3D G3DSA:3.40.50.261 119 277 3.8E-43 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Gene3D G3DSA:3.30.470.20 476 687 2.7E-54 T 12-10-2018 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 SUPERFAMILY SSF56059 477 683 6.36E-25 T 12-10-2018 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Gene3D G3DSA:3.30.1490.20 495 572 2.7E-54 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Pfam PF13549 ATP-grasp domain 470 690 4.0E-67 T 12-10-2018 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 SUPERFAMILY SSF55729 722 861 7.8E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Pfam PF13380 CoA binding domain 12 100 2.8E-15 T 12-10-2018 IPR003781 CoA-binding GO:0048037 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 8.5E-43 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 1.5E-6 T 12-10-2018 IPR000182 GNAT domain K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 Gene3D G3DSA:3.40.50.261 279 449 2.7E-50 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_41610 e8b3b69e47ff31a1149f0d35508eb371 882 SUPERFAMILY SSF51735 2 128 5.25E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_33370 821fde4f88862653ee2ba6661c239467 577 Pfam PF00474 Sodium:solute symporter family 36 432 2.4E-55 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_33370 821fde4f88862653ee2ba6661c239467 577 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 434 2.7E-75 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_33370 821fde4f88862653ee2ba6661c239467 577 Gene3D G3DSA:1.20.1730.10 25 506 1.2E-111 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_15240 adc1d0342b391ba1022781d53bf0f672 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.7E-54 T 12-10-2018 IPR021212 Domain of unknown function DUF2760 K04M3_03730 a9cdcb2cdc46829dea9aeaf03ecc2155 267 Pfam PF03180 NLPA lipoprotein 31 264 2.6E-84 T 12-10-2018 IPR004872 Lipoprotein NlpA family K04M3_03730 a9cdcb2cdc46829dea9aeaf03ecc2155 267 PIRSF PIRSF002854 1 267 1.4E-87 T 12-10-2018 IPR004872 Lipoprotein NlpA family K04M3_03730 a9cdcb2cdc46829dea9aeaf03ecc2155 267 Gene3D G3DSA:3.40.190.10 112 217 3.2E-90 T 12-10-2018 K04M3_03730 a9cdcb2cdc46829dea9aeaf03ecc2155 267 Gene3D G3DSA:3.40.190.10 32 262 3.2E-90 T 12-10-2018 K04M3_03730 a9cdcb2cdc46829dea9aeaf03ecc2155 267 SUPERFAMILY SSF53850 31 267 2.87E-80 T 12-10-2018 K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 Gene3D G3DSA:2.40.30.170 46 309 1.1E-91 T 12-10-2018 K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 373 8.1E-52 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 Gene3D G3DSA:1.10.287.470 91 182 1.1E-91 T 12-10-2018 K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 261 3.7E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 SUPERFAMILY SSF111369 50 305 3.66E-24 T 12-10-2018 K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 Gene3D G3DSA:2.40.420.20 41 369 1.1E-91 T 12-10-2018 K04M3_47580 3d8c9de0e46d39a543ca11a676709346 391 Gene3D G3DSA:2.40.50.100 57 219 1.1E-91 T 12-10-2018 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 SUPERFAMILY SSF53474 404 654 8.82E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 Gene3D G3DSA:3.40.50.1820 21 655 9.2E-146 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 612 4.1E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 431 449 4.1E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 504 4.1E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 457 481 4.1E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 534 4.1E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 587 4.1E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 Pfam PF00326 Prolyl oligopeptidase family 446 659 4.4E-56 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 Gene3D G3DSA:2.130.10.120 72 392 9.2E-146 T 12-10-2018 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 20 389 6.2E-23 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 K04M3_35250 5ddf8b47c5c409667ba7894e173fb866 665 SUPERFAMILY SSF50993 20 386 3.4E-31 T 12-10-2018 K04M3_35650 2a13bc84dab07bb57c2e1361ef3d8ab9 116 SUPERFAMILY SSF51182 2 109 3.17E-15 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_35650 2a13bc84dab07bb57c2e1361ef3d8ab9 116 Gene3D G3DSA:2.60.120.10 1 114 2.3E-27 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_35650 2a13bc84dab07bb57c2e1361ef3d8ab9 116 Pfam PF06249 Ethanolamine utilisation protein EutQ 4 111 3.4E-15 T 12-10-2018 IPR010424 Ethanolamine utilisation EutQ K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 Gene3D G3DSA:1.10.10.10 1 98 8.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.1E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.1E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.1E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.1E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 SUPERFAMILY SSF46785 8 96 3.64E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 6.7E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_04970 9accc6bcc03f40fcd000a0da18684817 102 SMART SM00418 15 93 7.5E-29 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 466 5.1E-79 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 1.1E-38 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 SUPERFAMILY SSF161070 3 477 4.58E-149 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_20980 ced5687a40c1e22255a791c5aebed73a 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_32860 d40b0e4c582c460a308cb4416cb4bcb9 228 Gene3D G3DSA:3.40.50.880 22 227 2.5E-48 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_32860 d40b0e4c582c460a308cb4416cb4bcb9 228 Pfam PF01965 DJ-1/PfpI family 32 202 1.2E-18 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 K04M3_32860 d40b0e4c582c460a308cb4416cb4bcb9 228 SUPERFAMILY SSF52317 32 222 1.37E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_14140 da49d2d22eb465e8f9deef15c3338d5a 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 6.3E-21 T 12-10-2018 IPR009305 Protein of unknown function DUF962 K04M3_20970 ef8db576c59980f83aa3441cb3b3c870 196 SUPERFAMILY SSF56925 28 196 1.39E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_20970 ef8db576c59980f83aa3441cb3b3c870 196 Gene3D G3DSA:2.40.160.20 26 196 2.7E-13 T 12-10-2018 K04M3_20970 ef8db576c59980f83aa3441cb3b3c870 196 Pfam PF13505 Outer membrane protein beta-barrel domain 10 194 2.2E-8 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_11970 25f514524df39ddca22a8593b9fcff7e 306 SUPERFAMILY SSF109604 24 299 2.51E-39 T 12-10-2018 K04M3_11970 25f514524df39ddca22a8593b9fcff7e 306 Pfam PF08668 HDOD domain 39 233 4.3E-37 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD K04M3_11970 25f514524df39ddca22a8593b9fcff7e 306 Gene3D G3DSA:1.10.3210.10 19 297 9.6E-39 T 12-10-2018 K04M3_17930 c318adbda19435b6f86f42e0a21d7573 208 PIRSF PIRSF006324 1 208 1.4E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_17930 c318adbda19435b6f86f42e0a21d7573 208 Pfam PF01810 LysE type translocator 15 205 7.2E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_27740 c8ea70b4bb25fdab361a4f7e068be262 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.7E-133 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 K04M3_27740 c8ea70b4bb25fdab361a4f7e068be262 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 6.0E-68 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 SUPERFAMILY SSF53223 1 122 7.87E-40 T 12-10-2018 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 Gene3D G3DSA:3.40.50.720 6 259 3.9E-108 T 12-10-2018 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.0E-69 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 SUPERFAMILY SSF51735 123 280 4.76E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 Gene3D G3DSA:3.40.50.10860 8 276 3.9E-108 T 12-10-2018 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.097 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 9.0E-39 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_08740 ada4611f8550f85370b302ce844bc61a 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.40.50.720 2 139 1.1E-51 T 12-10-2018 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02254 TrkA-N domain 3 123 2.7E-29 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02254 TrkA-N domain 235 350 5.6E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF116726 367 437 2.88E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02080 TrkA-C domain 390 451 1.5E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF51735 1 151 3.04E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 SUPERFAMILY SSF51735 232 376 3.73E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.30.70.1450 367 458 1.9E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 Gene3D G3DSA:3.40.50.720 233 366 2.6E-38 T 12-10-2018 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_31980 f121e92d2b11e1cf0a274e09a9a279ec 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 Pfam PF00072 Response regulator receiver domain 6 113 3.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 SMART SM00448 4 114 2.9E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 SMART SM00862 156 232 2.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 SUPERFAMILY SSF52172 2 130 3.98E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 Gene3D G3DSA:3.40.50.2300 2 122 4.4E-33 T 12-10-2018 K04M3_04590 bc0160e79b7de742bdb44ed0d30f34bb 238 Gene3D G3DSA:1.10.10.10 123 236 5.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16670 f3a882db4c5448618929465ab3db316d 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 638 1.2E-35 T 12-10-2018 IPR000160 GGDEF domain K04M3_16670 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.25.40.10 99 294 2.8E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 Pfam PF13424 Tetratricopeptide repeat 217 287 5.6E-9 T 12-10-2018 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00267 471 643 6.8E-37 T 12-10-2018 IPR000160 GGDEF domain K04M3_16670 f3a882db4c5448618929465ab3db316d 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 640 7.7E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SUPERFAMILY SSF48452 217 420 5.69E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:1.25.40.10 295 460 7.0E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SUPERFAMILY SSF48452 101 248 1.14E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SUPERFAMILY SSF55073 487 641 1.88E-34 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_16670 f3a882db4c5448618929465ab3db316d 656 Gene3D G3DSA:3.30.70.270 479 648 8.5E-38 T 12-10-2018 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 295 328 20.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 335 368 62.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 375 408 66.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 255 288 0.15 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 178 211 320.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_16670 f3a882db4c5448618929465ab3db316d 656 SMART SM00028 215 248 9.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 Gene3D G3DSA:3.40.640.10 35 295 5.5E-162 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 Gene3D G3DSA:3.90.1150.10 7 395 5.5E-162 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 5.3E-167 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 3.9E-158 T 12-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 Pfam PF00266 Aminotransferase class-V 24 392 2.2E-149 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 PIRSF PIRSF005572 21 403 6.6E-53 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 K04M3_24840 8ea81b994878a5644b76d0357c777b92 403 SUPERFAMILY SSF53383 2 400 1.01E-124 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 Pfam PF00155 Aminotransferase class I and II 147 442 4.0E-27 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 Gene3D G3DSA:3.40.640.10 105 471 6.5E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 SMART SM00345 27 86 1.9E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 SUPERFAMILY SSF46785 19 87 8.17E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 SUPERFAMILY SSF53383 116 477 3.21E-79 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 86 4.8E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_45460 d57ba2f1869c1e9c2a8936cc6a43e9d6 481 Gene3D G3DSA:1.10.10.10 17 87 1.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_25220 9d83caf102d744a5cde689800056279b 195 Pfam PF13505 Outer membrane protein beta-barrel domain 7 195 5.3E-19 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_25220 9d83caf102d744a5cde689800056279b 195 SUPERFAMILY SSF56925 21 195 6.8E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_25220 9d83caf102d744a5cde689800056279b 195 Gene3D G3DSA:2.40.160.20 20 195 2.2E-15 T 12-10-2018 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 2.8E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 SUPERFAMILY SSF58104 354 663 2.22E-73 T 12-10-2018 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 Gene3D G3DSA:1.10.287.950 333 663 2.7E-70 T 12-10-2018 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 SMART SM00283 401 662 4.1E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 SMART SM00304 334 386 1.6E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 5.5E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_09570 dc94c9962de28c017562b64f456e2855 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 5.5E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 K04M3_11150 aa427ed95fe521136ee1c5882e539f43 245 SUPERFAMILY SSF51366 2 242 1.68E-63 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_11150 aa427ed95fe521136ee1c5882e539f43 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.619 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 K04M3_11150 aa427ed95fe521136ee1c5882e539f43 245 Pfam PF00977 Histidine biosynthesis protein 2 234 8.2E-76 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 K04M3_11150 aa427ed95fe521136ee1c5882e539f43 245 Gene3D G3DSA:3.20.20.70 1 245 1.9E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_11150 aa427ed95fe521136ee1c5882e539f43 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 8.3E-78 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 K04M3_44920 b4503e3b2cbfb91d289c1b99b0b40395 424 Gene3D G3DSA:1.20.1250.20 31 419 1.6E-42 T 12-10-2018 K04M3_44920 b4503e3b2cbfb91d289c1b99b0b40395 424 SUPERFAMILY SSF103473 32 415 2.09E-45 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_44920 b4503e3b2cbfb91d289c1b99b0b40395 424 Pfam PF07690 Major Facilitator Superfamily 286 418 2.1E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_44920 b4503e3b2cbfb91d289c1b99b0b40395 424 Pfam PF07690 Major Facilitator Superfamily 43 275 8.9E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_48190 025127af792ae73281e74c3e547dcebe 242 SMART SM00382 30 212 9.0E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_48190 025127af792ae73281e74c3e547dcebe 242 SUPERFAMILY SSF52540 5 225 4.65E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_48190 025127af792ae73281e74c3e547dcebe 242 Pfam PF00005 ABC transporter 21 164 6.3E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_48190 025127af792ae73281e74c3e547dcebe 242 Gene3D G3DSA:3.40.50.300 2 241 2.8E-51 T 12-10-2018 K04M3_48190 025127af792ae73281e74c3e547dcebe 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43350 18ccfd1823bbff36959fc380c22bbf9c 316 Gene3D G3DSA:1.10.3470.10 5 315 8.6E-57 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_43350 18ccfd1823bbff36959fc380c22bbf9c 316 Pfam PF01032 FecCD transport family 27 312 1.4E-53 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_43350 18ccfd1823bbff36959fc380c22bbf9c 316 SUPERFAMILY SSF81345 6 312 4.05E-57 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 Gene3D G3DSA:1.10.10.10 2 81 5.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 Pfam PF00480 ROK family 88 390 7.0E-69 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 SUPERFAMILY SSF53067 86 395 2.93E-54 T 12-10-2018 K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 Gene3D G3DSA:3.30.420.40 91 387 4.9E-109 T 12-10-2018 K04M3_20930 59fe2c5f6c7eca02e5cc4fc2dbfec7a5 405 Gene3D G3DSA:3.30.420.40 208 377 4.9E-109 T 12-10-2018 K04M3_38340 78a4154cc5c664ec380f73f82b5f33c7 304 Gene3D G3DSA:1.10.357.140 29 198 2.7E-16 T 12-10-2018 K04M3_38340 78a4154cc5c664ec380f73f82b5f33c7 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site K04M3_38340 78a4154cc5c664ec380f73f82b5f33c7 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 292 6.2E-83 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 K04M3_38340 78a4154cc5c664ec380f73f82b5f33c7 304 Pfam PF01040 UbiA prenyltransferase family 34 285 8.7E-54 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 K04M3_38340 78a4154cc5c664ec380f73f82b5f33c7 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 300 17.002 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 K04M3_35840 a0b62e015b56fde0ebf5e78fb9304764 350 Pfam PF13439 Glycosyltransferase Family 4 71 161 1.5E-12 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_35840 a0b62e015b56fde0ebf5e78fb9304764 350 Gene3D G3DSA:3.40.50.2000 174 328 8.5E-38 T 12-10-2018 K04M3_35840 a0b62e015b56fde0ebf5e78fb9304764 350 Gene3D G3DSA:3.40.50.2000 4 173 1.8E-15 T 12-10-2018 K04M3_35840 a0b62e015b56fde0ebf5e78fb9304764 350 Pfam PF00534 Glycosyl transferases group 1 168 323 1.4E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_35840 a0b62e015b56fde0ebf5e78fb9304764 350 SUPERFAMILY SSF53756 1 348 2.28E-68 T 12-10-2018 K04M3_36710 bfc0a2ef006301e673a09e694ca37330 308 SMART SM00382 30 212 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_36710 bfc0a2ef006301e673a09e694ca37330 308 Gene3D G3DSA:3.40.50.300 1 243 1.9E-71 T 12-10-2018 K04M3_36710 bfc0a2ef006301e673a09e694ca37330 308 Pfam PF00005 ABC transporter 22 165 2.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_36710 bfc0a2ef006301e673a09e694ca37330 308 SUPERFAMILY SSF52540 5 227 6.44E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36710 bfc0a2ef006301e673a09e694ca37330 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_26270 704c5d6d3809af611443d955949062ba 154 Gene3D G3DSA:3.30.700.10 12 153 1.3E-25 T 12-10-2018 K04M3_26270 704c5d6d3809af611443d955949062ba 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 1.8E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_26270 704c5d6d3809af611443d955949062ba 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_26270 704c5d6d3809af611443d955949062ba 154 SUPERFAMILY SSF54523 12 138 8.89E-21 T 12-10-2018 K04M3_26270 704c5d6d3809af611443d955949062ba 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.9E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_04440 7f45555d895b329b915774717d838bca 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 8.0E-43 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_33270 1b9b9391bbb42686339997954a5fe8d6 254 SUPERFAMILY SSF52540 2 227 1.09E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_33270 1b9b9391bbb42686339997954a5fe8d6 254 Pfam PF00005 ABC transporter 19 165 2.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_33270 1b9b9391bbb42686339997954a5fe8d6 254 Gene3D G3DSA:3.40.50.300 1 253 5.8E-71 T 12-10-2018 K04M3_33270 1b9b9391bbb42686339997954a5fe8d6 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_33270 1b9b9391bbb42686339997954a5fe8d6 254 SMART SM00382 26 213 2.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_00340 e78038ad36bb38bc45070f6586b00e71 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site K04M3_00340 e78038ad36bb38bc45070f6586b00e71 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_00340 e78038ad36bb38bc45070f6586b00e71 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_00340 e78038ad36bb38bc45070f6586b00e71 193 Gene3D G3DSA:1.10.357.10 1 193 2.7E-73 T 12-10-2018 K04M3_00340 e78038ad36bb38bc45070f6586b00e71 193 SUPERFAMILY SSF46689 6 80 1.75E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_00340 e78038ad36bb38bc45070f6586b00e71 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.2E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_42830 7869cabf8e66829ea0dc8671cc3e0fcc 306 Pfam PF00892 EamA-like transporter family 157 288 1.6E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_42830 7869cabf8e66829ea0dc8671cc3e0fcc 306 Pfam PF00892 EamA-like transporter family 12 146 1.2E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_42830 7869cabf8e66829ea0dc8671cc3e0fcc 306 SUPERFAMILY SSF103481 194 290 9.02E-9 T 12-10-2018 K04M3_42830 7869cabf8e66829ea0dc8671cc3e0fcc 306 TIGRFAM TIGR00688 rarD: protein RarD 12 264 5.6E-50 T 12-10-2018 IPR004626 RarD protein GO:0005887 K04M3_42830 7869cabf8e66829ea0dc8671cc3e0fcc 306 SUPERFAMILY SSF103481 65 148 9.29E-11 T 12-10-2018 K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 SUPERFAMILY SSF55874 336 475 3.01E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 SMART SM00387 372 476 2.1E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 Gene3D G3DSA:3.30.565.10 333 475 5.9E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 SUPERFAMILY SSF47384 259 311 1.18E-8 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 Gene3D G3DSA:1.10.287.130 226 332 2.6E-14 T 12-10-2018 K04M3_33140 8d474c68d3af0579d44893fdf6617dd1 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 475 6.9E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_29230 5cfff304d6e42e4a965ccb80bd46e163 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 9.0E-21 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 K04M3_29230 5cfff304d6e42e4a965ccb80bd46e163 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 7.6E-32 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 K04M3_36200 574b306835f1250f304420fb82de2bd5 176 Gene3D G3DSA:2.30.110.10 12 176 3.7E-56 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 K04M3_36200 574b306835f1250f304420fb82de2bd5 176 SUPERFAMILY SSF50475 12 162 1.55E-35 T 12-10-2018 K04M3_36200 574b306835f1250f304420fb82de2bd5 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 4.7E-91 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain K04M3_36200 574b306835f1250f304420fb82de2bd5 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 7.6E-18 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_36200 574b306835f1250f304420fb82de2bd5 176 PIRSF PIRSF004633 1 176 4.2E-78 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain K04M3_30110 2ab8cd2630b4001f67a60fb68fdbf0f7 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 9.9E-258 T 12-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily K04M3_30110 2ab8cd2630b4001f67a60fb68fdbf0f7 575 Gene3D G3DSA:1.20.1730.10 345 556 3.3E-26 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_30110 2ab8cd2630b4001f67a60fb68fdbf0f7 575 Gene3D G3DSA:1.20.1730.10 21 329 7.7E-35 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_30110 2ab8cd2630b4001f67a60fb68fdbf0f7 575 Pfam PF00474 Sodium:solute symporter family 375 491 2.1E-15 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_30110 2ab8cd2630b4001f67a60fb68fdbf0f7 575 Pfam PF00474 Sodium:solute symporter family 33 296 1.5E-36 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 3.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 1.3E-151 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.20.200.10 118 447 4.9E-159 T 12-10-2018 K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.275.10 1 117 2.0E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.6E-52 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF00206 Lyase 14 313 4.2E-75 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 SUPERFAMILY SSF48557 4 448 5.5E-109 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 K04M3_11030 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.40.30 383 446 4.9E-159 T 12-10-2018 K04M3_31670 0e16b3264d744bbae3833270045c68b8 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.9E-25 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_31670 0e16b3264d744bbae3833270045c68b8 370 SMART SM00876 256 359 4.3E-35 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 K04M3_31670 0e16b3264d744bbae3833270045c68b8 370 SUPERFAMILY SSF102114 38 361 2.22E-56 T 12-10-2018 K04M3_31670 0e16b3264d744bbae3833270045c68b8 370 Pfam PF04055 Radical SAM superfamily 81 222 2.0E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_31670 0e16b3264d744bbae3833270045c68b8 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 1.8E-180 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 K04M3_31670 0e16b3264d744bbae3833270045c68b8 370 Gene3D G3DSA:3.20.20.70 8 363 4.0E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_22410 c61161db84fa0dbb937627cb3105deda 176 SMART SM00463 94 172 7.5E-14 T 12-10-2018 IPR002625 Smr domain K04M3_22410 c61161db84fa0dbb937627cb3105deda 176 Pfam PF01713 Smr domain 97 171 5.6E-17 T 12-10-2018 IPR002625 Smr domain K04M3_22410 c61161db84fa0dbb937627cb3105deda 176 SUPERFAMILY SSF160443 95 171 6.93E-11 T 12-10-2018 IPR036063 Smr domain superfamily K04M3_22410 c61161db84fa0dbb937627cb3105deda 176 Gene3D G3DSA:3.30.1370.110 49 175 1.0E-26 T 12-10-2018 K04M3_22410 c61161db84fa0dbb937627cb3105deda 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.336 T 12-10-2018 IPR022990 Uncharacterised protein family UPF0115 K04M3_35380 f37e3764b54d76b4ef792751cee9f539 334 SUPERFAMILY SSF53300 94 293 1.63E-38 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_35380 f37e3764b54d76b4ef792751cee9f539 334 Gene3D G3DSA:3.40.50.410 96 297 3.0E-59 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_35380 f37e3764b54d76b4ef792751cee9f539 334 Pfam PF00092 von Willebrand factor type A domain 98 290 5.4E-31 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_35380 f37e3764b54d76b4ef792751cee9f539 334 SMART SM00327 96 272 3.7E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_32320 8224803e89d505f7b567aa96fd04a1e3 257 SUPERFAMILY SSF52540 2 254 6.9E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32320 8224803e89d505f7b567aa96fd04a1e3 257 Pfam PF13614 AAA domain 2 178 5.6E-62 T 12-10-2018 IPR025669 AAA domain K04M3_32320 8224803e89d505f7b567aa96fd04a1e3 257 PIRSF PIRSF009320 88 251 6.6E-9 T 12-10-2018 K04M3_32320 8224803e89d505f7b567aa96fd04a1e3 257 PIRSF PIRSF009320 2 70 1.6E-13 T 12-10-2018 K04M3_32320 8224803e89d505f7b567aa96fd04a1e3 257 Gene3D G3DSA:3.40.50.300 1 255 1.5E-76 T 12-10-2018 K04M3_36190 755e2de9069c854dc53afc15a4fa7e9d 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 161 4.3E-33 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like K04M3_36190 755e2de9069c854dc53afc15a4fa7e9d 167 Gene3D G3DSA:3.40.1570.10 1 167 9.9E-60 T 12-10-2018 K04M3_36190 755e2de9069c854dc53afc15a4fa7e9d 167 SUPERFAMILY SSF144064 1 164 1.44E-55 T 12-10-2018 K04M3_36190 755e2de9069c854dc53afc15a4fa7e9d 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 10 161 3.6E-62 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like K04M3_36190 755e2de9069c854dc53afc15a4fa7e9d 167 PIRSF PIRSF030840 1 167 3.3E-62 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like K04M3_11710 1d6bd8758d877b9e62d24ef056eed9da 171 SUPERFAMILY SSF55729 1 151 1.86E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_11710 1d6bd8758d877b9e62d24ef056eed9da 171 Gene3D G3DSA:3.40.630.30 4 166 4.1E-34 T 12-10-2018 K04M3_11710 1d6bd8758d877b9e62d24ef056eed9da 171 Pfam PF00583 Acetyltransferase (GNAT) family 43 143 2.0E-15 T 12-10-2018 IPR000182 GNAT domain K04M3_15080 89492696a4f8002c7783a95aeec30f46 254 Gene3D G3DSA:3.40.50.300 1 248 7.7E-63 T 12-10-2018 K04M3_15080 89492696a4f8002c7783a95aeec30f46 254 Pfam PF00005 ABC transporter 17 165 9.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_15080 89492696a4f8002c7783a95aeec30f46 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_15080 89492696a4f8002c7783a95aeec30f46 254 SMART SM00382 26 214 2.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15080 89492696a4f8002c7783a95aeec30f46 254 SUPERFAMILY SSF52540 2 233 3.7E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15610 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 Pfam PF03881 Fructosamine kinase 1 286 4.5E-124 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 K04M3_15610 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 Gene3D G3DSA:3.90.1200.10 102 288 2.4E-66 T 12-10-2018 K04M3_15610 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 PIRSF PIRSF006221 1 288 3.0E-105 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 K04M3_15610 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 SUPERFAMILY SSF56112 4 282 3.23E-41 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_15610 ee3ea536d3bf9d3258a3cd2ab3d14fb3 288 Gene3D G3DSA:3.30.200.20 1 93 1.3E-21 T 12-10-2018 K04M3_47890 9a4319dff86b7c6986ab490e6c62b312 462 PIRSF PIRSF006446 1 459 1.9E-205 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_47890 9a4319dff86b7c6986ab490e6c62b312 462 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 435 3.8E-168 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_22040 7cf6091fc6ccfd5a9d96ef33b5803954 275 Gene3D G3DSA:3.40.50.150 1 273 3.4E-79 T 12-10-2018 K04M3_22040 7cf6091fc6ccfd5a9d96ef33b5803954 275 SUPERFAMILY SSF53335 4 258 6.57E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_22040 7cf6091fc6ccfd5a9d96ef33b5803954 275 PIRSF PIRSF018249 1 273 1.3E-86 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 K04M3_22040 7cf6091fc6ccfd5a9d96ef33b5803954 275 Pfam PF13847 Methyltransferase domain 85 220 1.2E-14 T 12-10-2018 IPR025714 Methyltransferase domain K04M3_20270 c95c6050da57c2e1589b900977d54cb1 394 Pfam PF17327 Acyl homoserine lactone synthase 18 389 3.9E-137 T 12-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 K04M3_20270 c95c6050da57c2e1589b900977d54cb1 394 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 183 385 1.0E-72 T 12-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 K04M3_20270 c95c6050da57c2e1589b900977d54cb1 394 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 156 1.0E-36 T 12-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 K04M3_43100 0d5cab12ecd4001c7a85c1d7d08dd50a 356 Gene3D G3DSA:3.40.50.410 105 306 5.7E-52 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_43100 0d5cab12ecd4001c7a85c1d7d08dd50a 356 SUPERFAMILY SSF53300 103 302 1.08E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily K04M3_43100 0d5cab12ecd4001c7a85c1d7d08dd50a 356 Pfam PF00092 von Willebrand factor type A domain 107 297 2.6E-25 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_43100 0d5cab12ecd4001c7a85c1d7d08dd50a 356 SMART SM00327 105 306 2.6E-24 T 12-10-2018 IPR002035 von Willebrand factor, type A K04M3_27830 5daba5666962dadea476a1834d5a975b 406 Gene3D G3DSA:3.75.10.10 6 403 2.7E-145 T 12-10-2018 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 Pfam PF02274 Amidinotransferase 18 403 2.0E-110 T 12-10-2018 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 SUPERFAMILY SSF55909 3 406 2.55E-128 T 12-10-2018 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.909 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 PIRSF PIRSF006356 1 406 4.0E-155 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 Gene3D G3DSA:1.10.3930.10 68 148 2.7E-145 T 12-10-2018 K04M3_27830 5daba5666962dadea476a1834d5a975b 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 2.4E-172 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 K04M3_40170 dea8011d010acdb9a3f0f3eb3093b079 364 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.7E-28 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_40170 dea8011d010acdb9a3f0f3eb3093b079 364 SUPERFAMILY SSF53901 7 325 7.48E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_40170 dea8011d010acdb9a3f0f3eb3093b079 364 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.5E-37 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_40170 dea8011d010acdb9a3f0f3eb3093b079 364 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 7.0E-111 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_40170 dea8011d010acdb9a3f0f3eb3093b079 364 Gene3D G3DSA:3.40.47.10 1 362 7.4E-154 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_40170 dea8011d010acdb9a3f0f3eb3093b079 364 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.763 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 K04M3_37690 54f4c03876ee53503c2bb787e9caba96 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 1.0E-12 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor K04M3_37690 54f4c03876ee53503c2bb787e9caba96 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.1E-30 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor K04M3_40290 6e29b4a9adeb9f322a3923c4974b5d1e 158 Pfam PF10517 Electron transfer DM13 63 157 9.4E-18 T 12-10-2018 IPR019545 DM13 domain K04M3_02010 ab524705ab9d899c4369a798b0385456 172 Pfam PF13505 Outer membrane protein beta-barrel domain 10 172 1.8E-18 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_02010 ab524705ab9d899c4369a798b0385456 172 Gene3D G3DSA:2.40.160.20 22 172 2.7E-16 T 12-10-2018 K04M3_02010 ab524705ab9d899c4369a798b0385456 172 SUPERFAMILY SSF56925 25 172 1.05E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_11400 7477ab4d52356651824d7ebd6a17bd4a 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.8E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_11400 7477ab4d52356651824d7ebd6a17bd4a 331 Pfam PF00005 ABC transporter 24 187 3.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_11400 7477ab4d52356651824d7ebd6a17bd4a 331 SUPERFAMILY SSF52540 4 268 9.84E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11400 7477ab4d52356651824d7ebd6a17bd4a 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.4E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_11400 7477ab4d52356651824d7ebd6a17bd4a 331 Gene3D G3DSA:3.40.50.300 2 331 5.1E-73 T 12-10-2018 K04M3_11400 7477ab4d52356651824d7ebd6a17bd4a 331 SMART SM00382 32 230 5.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_34350 f2d2d69f1236128ff12a7b1af9853d30 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 5.1E-26 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich K04M3_34350 f2d2d69f1236128ff12a7b1af9853d30 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 4.0E-22 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich K04M3_47430 f4a37d0ca01bfa396fb951bb43a1061f 335 PIRSF PIRSF002825 5 328 2.3E-79 T 12-10-2018 IPR026045 Ferric binding protein K04M3_47430 f4a37d0ca01bfa396fb951bb43a1061f 335 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 5 332 9.6E-159 T 12-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative K04M3_47430 f4a37d0ca01bfa396fb951bb43a1061f 335 SUPERFAMILY SSF53850 26 325 6.96E-63 T 12-10-2018 K04M3_47430 f4a37d0ca01bfa396fb951bb43a1061f 335 Gene3D G3DSA:3.40.190.10 29 296 1.2E-78 T 12-10-2018 K04M3_47430 f4a37d0ca01bfa396fb951bb43a1061f 335 Pfam PF13343 Bacterial extracellular solute-binding protein 74 294 8.7E-27 T 12-10-2018 K04M3_47430 f4a37d0ca01bfa396fb951bb43a1061f 335 Gene3D G3DSA:3.40.190.10 132 310 1.2E-78 T 12-10-2018 K04M3_49480 204f420336caf502784679a13f7ffe58 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_49480 204f420336caf502784679a13f7ffe58 232 Pfam PF00005 ABC transporter 21 169 3.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_49480 204f420336caf502784679a13f7ffe58 232 SUPERFAMILY SSF52540 1 223 1.33E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_49480 204f420336caf502784679a13f7ffe58 232 Gene3D G3DSA:3.40.50.300 1 229 1.4E-66 T 12-10-2018 K04M3_49480 204f420336caf502784679a13f7ffe58 232 SMART SM00382 30 219 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_17310 66e846def1d22e4491762c17c6f90277 322 SUPERFAMILY SSF101801 242 318 5.75E-20 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_17310 66e846def1d22e4491762c17c6f90277 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 247 314 1.0E-20 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) K04M3_17310 66e846def1d22e4491762c17c6f90277 322 SUPERFAMILY SSF101801 166 220 1.44E-6 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_17310 66e846def1d22e4491762c17c6f90277 322 Gene3D G3DSA:2.30.330.10 231 319 9.1E-28 T 12-10-2018 IPR036429 SpoA-like superfamily K04M3_17310 66e846def1d22e4491762c17c6f90277 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 278 291 1.6E-7 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_17310 66e846def1d22e4491762c17c6f90277 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 291 306 1.6E-7 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_17310 66e846def1d22e4491762c17c6f90277 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 245 261 1.6E-7 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_17310 66e846def1d22e4491762c17c6f90277 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 262 278 1.6E-7 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 K04M3_17310 66e846def1d22e4491762c17c6f90277 322 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 40 314 8.0E-66 T 12-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 K04M3_46610 3020b0a62190716a03fa9f4688a9d234 402 Pfam PF07690 Major Facilitator Superfamily 11 269 3.1E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_46610 3020b0a62190716a03fa9f4688a9d234 402 Gene3D G3DSA:1.20.1250.20 8 385 1.6E-23 T 12-10-2018 K04M3_46610 3020b0a62190716a03fa9f4688a9d234 402 SUPERFAMILY SSF103473 9 388 3.27E-34 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_34670 bce742b27031ac210e8c7fa076c41e32 307 Pfam PF00892 EamA-like transporter family 6 136 1.4E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_34670 bce742b27031ac210e8c7fa076c41e32 307 Pfam PF00892 EamA-like transporter family 150 288 2.4E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_34670 bce742b27031ac210e8c7fa076c41e32 307 SUPERFAMILY SSF103481 41 140 5.1E-11 T 12-10-2018 K04M3_34670 bce742b27031ac210e8c7fa076c41e32 307 SUPERFAMILY SSF103481 182 288 4.97E-9 T 12-10-2018 K04M3_10690 ec728a76dd6250762969d0666d1b3633 318 Pfam PF03547 Membrane transport protein 164 307 5.4E-15 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 K04M3_42650 a15a54549cb69f77309057353a766b5d 142 Pfam PF03061 Thioesterase superfamily 59 109 7.7E-8 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 K04M3_42650 a15a54549cb69f77309057353a766b5d 142 Gene3D G3DSA:3.10.129.10 3 142 6.8E-26 T 12-10-2018 K04M3_42650 a15a54549cb69f77309057353a766b5d 142 SUPERFAMILY SSF54637 13 137 1.31E-24 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 PIRSF PIRSF000726 2 450 4.2E-129 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 Gene3D G3DSA:3.40.1160.10 6 290 3.2E-99 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 12-10-2018 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 Gene3D G3DSA:3.30.70.260 380 450 4.6E-17 T 12-10-2018 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 Pfam PF00696 Amino acid kinase family 6 278 2.5E-46 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 SUPERFAMILY SSF53633 6 293 3.67E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 SUPERFAMILY SSF55021 377 449 9.16E-15 T 12-10-2018 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 Gene3D G3DSA:1.20.120.1320 42 135 3.2E-99 T 12-10-2018 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 2.6E-122 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.2E-122 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 K04M3_28480 0bde4bf71793ef8711ee2d122ef7f8ec 450 Gene3D G3DSA:3.30.70.260 310 379 7.1E-29 T 12-10-2018 K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 Pfam PF00005 ABC transporter 25 173 2.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 SUPERFAMILY SSF52540 5 236 2.47E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 SMART SM00382 34 221 1.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 Pfam PF02687 FtsX-like permease family 559 647 1.3E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 Gene3D G3DSA:3.40.50.300 3 266 3.6E-72 T 12-10-2018 K04M3_47570 229f576289e8aee726cf444fc363c2b4 654 Pfam PF12704 MacB-like periplasmic core domain 279 496 1.0E-40 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 Pfam PF00664 ABC transporter transmembrane region 158 417 5.7E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.6E-295 T 12-10-2018 IPR017750 ATPase, type I secretion system K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 SMART SM00382 495 681 2.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 Gene3D G3DSA:3.90.70.10 1 126 7.1E-38 T 12-10-2018 K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 Pfam PF00005 ABC transporter 487 635 2.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 Gene3D G3DSA:3.40.50.300 460 703 2.6E-75 T 12-10-2018 K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 SUPERFAMILY SSF90123 142 452 4.84E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 SUPERFAMILY SSF52540 459 693 1.09E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32590 d54dfaca0433deed9e489a46c4f76ac7 704 Gene3D G3DSA:1.20.1560.10 141 454 1.5E-56 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 K04M3_16330 f80a6882c4c1b5f83cd1458a64c59b21 1613 SUPERFAMILY SSF51735 945 1281 9.84E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_16330 f80a6882c4c1b5f83cd1458a64c59b21 1613 PIRSF PIRSF036761 1 1610 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 K04M3_16330 f80a6882c4c1b5f83cd1458a64c59b21 1613 SUPERFAMILY SSF53223 754 940 1.34E-25 T 12-10-2018 K04M3_16330 f80a6882c4c1b5f83cd1458a64c59b21 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 K04M3_18410 257a62289fa0ba718c63a11f3add4176 449 Pfam PF00589 Phage integrase family 247 409 8.2E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_18410 257a62289fa0ba718c63a11f3add4176 449 Gene3D G3DSA:1.10.443.10 246 424 1.7E-14 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_18410 257a62289fa0ba718c63a11f3add4176 449 Gene3D G3DSA:3.30.160.390 5 102 1.7E-26 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily K04M3_18410 257a62289fa0ba718c63a11f3add4176 449 Pfam PF13356 Arm DNA-binding domain 7 92 1.0E-14 T 12-10-2018 IPR025166 Integrase, DNA-binding domain K04M3_18410 257a62289fa0ba718c63a11f3add4176 449 SUPERFAMILY SSF56349 152 416 1.12E-41 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_38820 d55e8a30672ef11e423d77560af7d535 305 Gene3D G3DSA:3.40.50.1820 64 302 2.3E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_38820 d55e8a30672ef11e423d77560af7d535 305 SUPERFAMILY SSF53474 78 302 5.84E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_38820 d55e8a30672ef11e423d77560af7d535 305 Pfam PF01738 Dienelactone hydrolase family 92 301 2.0E-46 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 Gene3D G3DSA:2.60.120.10 5 138 5.0E-13 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 7.7E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 SUPERFAMILY SSF54631 144 276 3.41E-16 T 12-10-2018 K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 Gene3D G3DSA:3.10.580.10 140 288 1.2E-16 T 12-10-2018 K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 2.5E-39 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 1.1E-41 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 K04M3_30170 c3be0471adcd2c555d6ff40fdaa4e481 608 SUPERFAMILY SSF51206 8 128 3.01E-17 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like K04M3_46300 88a3891ff7711ec93f94ba41faca8296 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 67.04 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein K04M3_46300 88a3891ff7711ec93f94ba41faca8296 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 1.3E-73 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 SUPERFAMILY SSF50891 18 180 7.6E-53 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 4.1E-43 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 Gene3D G3DSA:2.40.100.10 18 181 7.5E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 PIRSF PIRSF001467 5 181 2.2E-24 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 9.2E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 9.2E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 9.2E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_24750 6bb3f8173a27a4dd6b055437dee14e11 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 K04M3_31210 e2e3a13838943bdc3499127f65367a45 516 PIRSF PIRSF028175 1 516 1.3E-303 T 12-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 K04M3_33750 add2c6f0e8e41f158920826a7ce45f2e 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 6.2E-127 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 K04M3_33750 add2c6f0e8e41f158920826a7ce45f2e 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 8.6E-192 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 K04M3_33750 add2c6f0e8e41f158920826a7ce45f2e 726 SUPERFAMILY SSF51445 164 717 5.06E-149 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_36980 db30b6546fe65f5a8b3ba1a4a3d86f54 110 Pfam PF13560 Helix-turn-helix domain 10 61 1.6E-9 T 12-10-2018 K04M3_36980 db30b6546fe65f5a8b3ba1a4a3d86f54 110 SUPERFAMILY SSF47413 6 61 3.94E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_36980 db30b6546fe65f5a8b3ba1a4a3d86f54 110 SMART SM00530 9 64 1.5E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_36980 db30b6546fe65f5a8b3ba1a4a3d86f54 110 Gene3D G3DSA:1.10.260.40 5 79 7.6E-11 T 12-10-2018 K04M3_22740 c0c342560003f712da3de868ba37b055 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.9E-133 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 K04M3_22740 c0c342560003f712da3de868ba37b055 376 Gene3D G3DSA:3.40.1690.10 218 359 2.4E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal K04M3_22740 c0c342560003f712da3de868ba37b055 376 SUPERFAMILY SSF160544 250 355 1.05E-39 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal K04M3_22740 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_22740 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_22740 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_22740 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_22740 c0c342560003f712da3de868ba37b055 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.1E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_22740 c0c342560003f712da3de868ba37b055 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.2E-120 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 K04M3_26450 8b033c9d3cda93529e43a5a04a084a6e 153 Pfam PF09335 SNARE associated Golgi protein 53 146 1.2E-9 T 12-10-2018 IPR032816 SNARE associated Golgi protein K04M3_26450 8b033c9d3cda93529e43a5a04a084a6e 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.001 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 K04M3_02490 9f5db3241aa6570d3512e2b9d3f787cf 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 286 4.3E-142 T 12-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 K04M3_02490 9f5db3241aa6570d3512e2b9d3f787cf 291 Gene3D G3DSA:3.20.20.60 1 289 2.0E-91 T 12-10-2018 K04M3_02490 9f5db3241aa6570d3512e2b9d3f787cf 291 SUPERFAMILY SSF51621 2 235 8.72E-61 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_02490 9f5db3241aa6570d3512e2b9d3f787cf 291 PIRSF PIRSF015582 1 291 1.0E-78 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like K04M3_02490 9f5db3241aa6570d3512e2b9d3f787cf 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 2.8E-84 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 K04M3_48530 c63424c889ce28847f01531502c4f741 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_48530 c63424c889ce28847f01531502c4f741 251 Gene3D G3DSA:3.40.50.300 7 234 5.4E-56 T 12-10-2018 K04M3_48530 c63424c889ce28847f01531502c4f741 251 Pfam PF00005 ABC transporter 26 166 2.8E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_48530 c63424c889ce28847f01531502c4f741 251 SUPERFAMILY SSF52540 12 212 2.05E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_48530 c63424c889ce28847f01531502c4f741 251 SMART SM00382 34 213 2.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_03140 9f8aa0a47f680b7ac96b735358a91c0f 115 Gene3D G3DSA:3.10.490.10 4 115 1.5E-38 T 12-10-2018 K04M3_03140 9f8aa0a47f680b7ac96b735358a91c0f 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.9E-25 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like K04M3_03140 9f8aa0a47f680b7ac96b735358a91c0f 115 SUPERFAMILY SSF110857 3 113 1.7E-32 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 SUPERFAMILY SSF46689 349 486 7.62E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 SUPERFAMILY SSF52540 137 378 1.84E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:1.10.8.60 309 385 9.2E-25 T 12-10-2018 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 1.1E-30 T 12-10-2018 IPR010518 Flagellar regulatory FleQ K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:3.40.50.300 125 308 1.8E-66 T 12-10-2018 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Pfam PF00158 Sigma-54 interaction domain 137 304 5.4E-73 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:3.40.50.2300 1 117 3.2E-11 T 12-10-2018 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 1.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 SMART SM00382 157 301 3.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_22920 89b33a7e0fa87057c7fbf67253ec5c60 488 Gene3D G3DSA:1.10.10.60 422 488 2.8E-13 T 12-10-2018 K04M3_19620 65dda5dbffff89c661454a871270da16 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 229 4.0E-24 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_19620 65dda5dbffff89c661454a871270da16 239 SUPERFAMILY SSF53098 41 227 6.4E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_19620 65dda5dbffff89c661454a871270da16 239 Gene3D G3DSA:3.30.420.10 44 230 3.5E-37 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_19620 65dda5dbffff89c661454a871270da16 239 SMART SM00479 48 229 4.0E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_19620 65dda5dbffff89c661454a871270da16 239 Pfam PF00929 Exonuclease 50 220 3.5E-14 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_02930 532f7cf570b478a6979ec89b4781d074 153 SUPERFAMILY SSF55729 1 150 6.42E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_02930 532f7cf570b478a6979ec89b4781d074 153 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 2.1E-16 T 12-10-2018 IPR000182 GNAT domain K04M3_02930 532f7cf570b478a6979ec89b4781d074 153 Gene3D G3DSA:3.40.630.30 1 149 3.7E-42 T 12-10-2018 K04M3_25730 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 K04M3_25730 f019e7982d442aec08b0239f7a90b76f 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 K04M3_25730 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.0E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 K04M3_25730 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 1 98 7.2E-37 T 12-10-2018 IPR035920 YhbY-like superfamily K04M3_25730 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 K04M3_25730 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 12-10-2018 IPR035920 YhbY-like superfamily K04M3_04620 f20a88b12bb376cfb92218ccb55d69b4 156 SUPERFAMILY SSF56935 40 150 4.27E-6 T 12-10-2018 K04M3_04620 f20a88b12bb376cfb92218ccb55d69b4 156 PIRSF PIRSF028680 1 156 1.7E-72 T 12-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 K04M3_23080 f9f42859b8873c3e1eb6f1b41b722574 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 1.1E-20 T 12-10-2018 IPR021550 Protein of unknown function DUF2897 K04M3_37730 5082accee8e373240316d59bf920784e 416 SMART SM00487 27 232 2.1E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_37730 5082accee8e373240316d59bf920784e 416 Pfam PF00270 DEAD/DEAH box helicase 32 206 7.1E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_37730 5082accee8e373240316d59bf920784e 416 SUPERFAMILY SSF52540 86 370 8.99E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37730 5082accee8e373240316d59bf920784e 416 Gene3D G3DSA:3.40.50.300 2 220 3.3E-75 T 12-10-2018 K04M3_37730 5082accee8e373240316d59bf920784e 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_37730 5082accee8e373240316d59bf920784e 416 Gene3D G3DSA:3.40.50.300 222 392 4.5E-47 T 12-10-2018 K04M3_37730 5082accee8e373240316d59bf920784e 416 SMART SM00490 267 348 1.1E-32 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_37730 5082accee8e373240316d59bf920784e 416 Pfam PF00271 Helicase conserved C-terminal domain 241 348 3.0E-29 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_09560 a4a6332db40c977891142a7a73ddaa1e 386 Gene3D G3DSA:3.40.50.10770 1 140 1.6E-59 T 12-10-2018 K04M3_09560 a4a6332db40c977891142a7a73ddaa1e 386 Gene3D G3DSA:1.10.10.680 169 250 1.8E-77 T 12-10-2018 K04M3_09560 a4a6332db40c977891142a7a73ddaa1e 386 Gene3D G3DSA:3.40.1350.10 251 376 1.8E-77 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 K04M3_09560 a4a6332db40c977891142a7a73ddaa1e 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 378 1.1E-161 T 12-10-2018 IPR015093 Protein of unknown function DUF1887 K04M3_09560 a4a6332db40c977891142a7a73ddaa1e 386 SUPERFAMILY SSF52980 1 382 3.22E-117 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 SUPERFAMILY SSF51182 20 185 3.34E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 Pfam PF12833 Helix-turn-helix domain 182 260 1.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 4.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 4.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 SUPERFAMILY SSF46689 213 260 1.08E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 Gene3D G3DSA:1.10.10.60 156 261 4.5E-24 T 12-10-2018 K04M3_35970 c89fde90bd9f9f2ecb60e9e620cf10da 262 SMART SM00342 176 258 2.3E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_09070 3e579c49cb16756ca27f21e9367a4fe0 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 2.0E-85 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_09070 3e579c49cb16756ca27f21e9367a4fe0 453 PIRSF PIRSF006066 1 270 1.1E-90 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_09070 3e579c49cb16756ca27f21e9367a4fe0 453 PIRSF PIRSF006066 271 447 4.9E-49 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_09070 3e579c49cb16756ca27f21e9367a4fe0 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 1.3E-117 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit K04M3_42760 ab2c3d7131b2900649e8a9842f897f04 190 Gene3D G3DSA:3.40.630.30 6 177 1.0E-27 T 12-10-2018 K04M3_42760 ab2c3d7131b2900649e8a9842f897f04 190 Pfam PF13302 Acetyltransferase (GNAT) domain 24 163 4.2E-12 T 12-10-2018 IPR000182 GNAT domain K04M3_42760 ab2c3d7131b2900649e8a9842f897f04 190 SUPERFAMILY SSF55729 22 165 9.33E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 SMART SM00388 221 286 1.7E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 SMART SM00387 334 447 3.4E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 286 2.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 SMART SM00448 466 578 3.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 Gene3D G3DSA:1.10.287.130 192 284 9.3E-27 T 12-10-2018 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 4.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 4.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 4.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 SUPERFAMILY SSF55874 275 442 1.57E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 SUPERFAMILY SSF47384 207 287 1.16E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 Pfam PF00072 Response regulator receiver domain 468 578 2.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 Gene3D G3DSA:3.40.50.2300 449 589 3.6E-35 T 12-10-2018 K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 SUPERFAMILY SSF52172 465 583 1.38E-32 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 443 6.1E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_23350 ba18dda3fb33542b3e2baa4ab4d4e478 592 Gene3D G3DSA:3.30.565.10 285 447 5.6E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_30240 05026a9154ebab7434c0e033136b7253 306 PIRSF PIRSF006621 1 305 4.7E-96 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 Gene3D G3DSA:1.10.1200.80 235 306 6.5E-8 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 305 45.691 T 12-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 Pfam PF01207 Dihydrouridine synthase (Dus) 1 290 2.1E-106 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 Gene3D G3DSA:3.20.20.70 1 233 3.8E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 78 96 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 304 5.6E-124 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 K04M3_30240 05026a9154ebab7434c0e033136b7253 306 SUPERFAMILY SSF51395 1 303 7.69E-86 T 12-10-2018 K04M3_08290 d7eae29075d56868209699907257f6bf 167 SUPERFAMILY SSF54637 10 156 1.16E-22 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_08290 d7eae29075d56868209699907257f6bf 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.7E-24 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 K04M3_08290 d7eae29075d56868209699907257f6bf 167 Gene3D G3DSA:3.10.129.10 15 157 5.7E-27 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 Pfam PF00691 OmpA family 211 306 5.9E-18 T 12-10-2018 IPR006665 OmpA-like domain K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 Gene3D G3DSA:3.30.1330.60 200 324 7.9E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 72 90 2.0E-9 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 2.0E-9 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 228 254 2.0E-9 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 315 2.0E-9 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 225 2.0E-9 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 Gene3D G3DSA:2.60.40.2540 53 198 4.7E-15 T 12-10-2018 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01021 OMPA domain signature 211 233 4.1E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01021 OMPA domain signature 257 273 4.1E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 PRINTS PR01021 OMPA domain signature 242 257 4.1E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_34570 08ad18888c905a5c1791165f85fa2ee5 339 SUPERFAMILY SSF103088 187 311 1.31E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_25030 43b58b6b060838662af8055cba016409 361 Pfam PF13391 HNH endonuclease 254 306 7.7E-10 T 12-10-2018 IPR003615 HNH nuclease K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 12-10-2018 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.5E-187 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:3.40.50.300 118 297 9.7E-50 T 12-10-2018 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 SUPERFAMILY SSF52540 133 344 5.35E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_00010 26c92c227e99161afbf97322a94299b8 468 SMART SM00760 376 445 3.4E-45 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Pfam PF00308 Bacterial dnaA protein 134 350 2.5E-98 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like K04M3_00010 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like K04M3_00010 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like K04M3_00010 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like K04M3_00010 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like K04M3_00010 26c92c227e99161afbf97322a94299b8 468 SMART SM00382 165 378 4.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.591 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Pfam PF11638 DnaA N-terminal domain 4 65 7.8E-20 T 12-10-2018 IPR024633 DnaA N-terminal domain K04M3_00010 26c92c227e99161afbf97322a94299b8 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 K04M3_00010 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:3.30.300.180 2 114 1.1E-41 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily K04M3_18760 ad11d7ba4907611fa73b3083581fdd3e 96 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 16 60 7.3E-13 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA K04M3_08130 cd2845587a785ee7475edac126aadec4 92 SUPERFAMILY SSF52833 5 87 1.07E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_08130 cd2845587a785ee7475edac126aadec4 92 Pfam PF10262 Rdx family 6 78 4.3E-31 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type K04M3_08130 cd2845587a785ee7475edac126aadec4 92 Gene3D G3DSA:3.40.30.10 2 92 5.3E-39 T 12-10-2018 K04M3_08130 cd2845587a785ee7475edac126aadec4 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.6E-24 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type K04M3_15190 f1300097a15a0f7b3e17405b533df85e 325 Gene3D G3DSA:3.40.50.720 1 118 4.0E-31 T 12-10-2018 K04M3_15190 f1300097a15a0f7b3e17405b533df85e 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 3.2E-19 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 K04M3_15190 f1300097a15a0f7b3e17405b533df85e 325 SUPERFAMILY SSF51735 2 150 2.06E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_15190 f1300097a15a0f7b3e17405b533df85e 325 Gene3D G3DSA:3.30.360.10 121 324 1.0E-26 T 12-10-2018 K04M3_15190 f1300097a15a0f7b3e17405b533df85e 325 SUPERFAMILY SSF55347 125 293 2.29E-18 T 12-10-2018 K04M3_17070 5055b6fd97052f3f5171a5e923cec06b 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 K04M3_17070 5055b6fd97052f3f5171a5e923cec06b 298 Gene3D G3DSA:3.20.20.60 4 298 1.0E-96 T 12-10-2018 K04M3_17070 5055b6fd97052f3f5171a5e923cec06b 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 1.6E-126 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 K04M3_17070 5055b6fd97052f3f5171a5e923cec06b 298 SUPERFAMILY SSF51621 5 294 2.11E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 K04M3_17070 5055b6fd97052f3f5171a5e923cec06b 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 259 1.8E-45 T 12-10-2018 K04M3_17070 5055b6fd97052f3f5171a5e923cec06b 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.501 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 K04M3_49760 01dd9345c27b168929dcfac4fdbdc136 176 Gene3D G3DSA:1.10.472.120 22 139 9.8E-6 T 12-10-2018 K04M3_51590 6278a96eb962ceaf686ba6b381688df0 478 Pfam PF00145 C-5 cytosine-specific DNA methylase 207 347 1.2E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_51590 6278a96eb962ceaf686ba6b381688df0 478 Gene3D G3DSA:3.40.50.150 142 356 4.7E-20 T 12-10-2018 K04M3_51590 6278a96eb962ceaf686ba6b381688df0 478 SUPERFAMILY SSF53335 196 462 1.72E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_23110 220127384b38cc0ef3030460cc4b2142 180 PIRSF PIRSF028103 1 178 5.6E-68 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 K04M3_23110 220127384b38cc0ef3030460cc4b2142 180 Gene3D G3DSA:3.30.70.260 1 85 1.3E-24 T 12-10-2018 K04M3_23110 220127384b38cc0ef3030460cc4b2142 180 SUPERFAMILY SSF55021 1 81 6.01E-18 T 12-10-2018 K04M3_23110 220127384b38cc0ef3030460cc4b2142 180 Gene3D G3DSA:3.30.70.260 87 180 4.1E-39 T 12-10-2018 K04M3_23110 220127384b38cc0ef3030460cc4b2142 180 SUPERFAMILY SSF55021 90 176 6.59E-21 T 12-10-2018 K04M3_23110 220127384b38cc0ef3030460cc4b2142 180 Pfam PF13740 ACT domain 3 78 1.5E-22 T 12-10-2018 K04M3_10310 071dccc5abc36ebff9820ace9fb260a3 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.1E-173 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like K04M3_10310 071dccc5abc36ebff9820ace9fb260a3 323 Gene3D G3DSA:3.40.50.150 93 293 5.4E-21 T 12-10-2018 K04M3_10310 071dccc5abc36ebff9820ace9fb260a3 323 SUPERFAMILY SSF53335 91 323 8.59E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_10310 071dccc5abc36ebff9820ace9fb260a3 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 5.1E-147 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 K04M3_10310 071dccc5abc36ebff9820ace9fb260a3 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.682 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 K04M3_38330 493d828549143048fd98c817de224283 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 7 101 1.3E-36 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 K04M3_38330 493d828549143048fd98c817de224283 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 8.8E-18 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 K04M3_34920 9c7eb89484ef85426eb8ece14d663999 115 SUPERFAMILY SSF47413 8 87 1.04E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_34920 9c7eb89484ef85426eb8ece14d663999 115 Gene3D G3DSA:1.10.260.40 3 86 2.7E-9 T 12-10-2018 K04M3_45090 ce23bf62e59a621938b67441763b37a6 152 PIRSF PIRSF006105 1 152 2.2E-47 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB K04M3_45090 ce23bf62e59a621938b67441763b37a6 152 SUPERFAMILY SSF48695 39 149 1.01E-40 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_45090 ce23bf62e59a621938b67441763b37a6 152 Gene3D G3DSA:1.10.1130.10 66 133 1.1E-28 T 12-10-2018 K04M3_45090 ce23bf62e59a621938b67441763b37a6 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 33 146 2.2E-48 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 Gene3D G3DSA:3.40.50.300 1 176 1.4E-57 T 12-10-2018 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 Gene3D G3DSA:1.10.8.60 177 259 5.2E-26 T 12-10-2018 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 SUPERFAMILY SSF46689 278 331 1.25E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 Pfam PF00158 Sigma-54 interaction domain 5 167 2.0E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 5.9E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 5.9E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 5.9E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 SUPERFAMILY SSF52540 4 237 2.08E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 295 312 3.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 312 332 3.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 Gene3D G3DSA:1.10.10.60 262 332 9.8E-8 T 12-10-2018 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 329 4.2E-165 T 12-10-2018 IPR014317 Transcription activator PspF K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 Pfam PF02954 Bacterial regulatory protein, Fis family 295 323 3.6E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_11440 92b2e22a9015ff90addd5d17edc0811c 335 SMART SM00382 25 177 1.7E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15150 f583f46b14091f30b7a778ba7fc6ffbd 163 SUPERFAMILY SSF54523 7 123 2.75E-12 T 12-10-2018 K04M3_15150 f583f46b14091f30b7a778ba7fc6ffbd 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.3E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_15150 f583f46b14091f30b7a778ba7fc6ffbd 163 Gene3D G3DSA:3.30.700.10 7 98 2.0E-10 T 12-10-2018 K04M3_15150 f583f46b14091f30b7a778ba7fc6ffbd 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.2E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.2E-13 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.2E-13 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.2E-13 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.2E-13 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 12-10-2018 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 SUPERFAMILY SSF51905 3 347 2.75E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 3.9E-62 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_09640 c76f13ed22ed9bb1458b1d97d7e296be 429 Gene3D G3DSA:3.50.50.100 1 409 3.0E-114 T 12-10-2018 K04M3_32160 ea3c4680c4e873b05291ffe1351f05ff 300 Pfam PF03466 LysR substrate binding domain 88 287 1.6E-20 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_32160 ea3c4680c4e873b05291ffe1351f05ff 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 8.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_32160 ea3c4680c4e873b05291ffe1351f05ff 300 Gene3D G3DSA:1.10.10.10 1 90 2.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32160 ea3c4680c4e873b05291ffe1351f05ff 300 Gene3D G3DSA:3.40.190.290 93 276 9.0E-12 T 12-10-2018 K04M3_32160 ea3c4680c4e873b05291ffe1351f05ff 300 SUPERFAMILY SSF46785 6 87 3.05E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_32160 ea3c4680c4e873b05291ffe1351f05ff 300 SUPERFAMILY SSF53850 89 291 6.03E-24 T 12-10-2018 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 12-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 PRINTS PR01607 Apyrase family signature 28 46 6.0E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 PRINTS PR01607 Apyrase family signature 434 457 6.0E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 PRINTS PR01607 Apyrase family signature 221 238 6.0E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 PRINTS PR01607 Apyrase family signature 536 555 6.0E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 PRINTS PR01607 Apyrase family signature 249 272 6.0E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 PRINTS PR01607 Apyrase family signature 289 309 6.0E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 6.7E-21 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 1.6E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 SUPERFAMILY SSF55816 361 603 1.7E-36 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 SUPERFAMILY SSF56300 23 360 1.52E-88 T 12-10-2018 K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 Gene3D G3DSA:3.60.21.10 22 360 3.7E-137 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_02960 e8d570b27b06aa5b74366cbbdde59b5a 653 Gene3D G3DSA:3.90.780.10 415 592 7.9E-49 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 K04M3_44690 7e937ee8798ae66cabb6293f93a7ac6c 157 Pfam PF08896 Domain of unknown function (DUF1842) 11 125 1.5E-23 T 12-10-2018 IPR014992 Domain of unknown function DUF1842 K04M3_35020 2320334833b4d339782f097043f5f90b 248 Pfam PF12945 Flagellar protein YcgR 39 128 2.3E-13 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal K04M3_35020 2320334833b4d339782f097043f5f90b 248 Pfam PF07238 PilZ domain 135 236 5.3E-14 T 12-10-2018 IPR009875 PilZ domain GO:0035438 K04M3_35020 2320334833b4d339782f097043f5f90b 248 Gene3D G3DSA:2.40.10.220 138 248 8.1E-38 T 12-10-2018 K04M3_35020 2320334833b4d339782f097043f5f90b 248 Gene3D G3DSA:2.30.110.10 24 137 2.0E-40 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 K04M3_35020 2320334833b4d339782f097043f5f90b 248 SUPERFAMILY SSF141371 139 247 2.62E-31 T 12-10-2018 K04M3_35020 2320334833b4d339782f097043f5f90b 248 SUPERFAMILY SSF141371 26 138 8.63E-33 T 12-10-2018 K04M3_06460 5c70272b9ef974adc3adb3b2fb6b6a7b 728 Gene3D G3DSA:2.40.170.20 161 727 6.9E-80 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_06460 5c70272b9ef974adc3adb3b2fb6b6a7b 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 142 4.8E-13 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_06460 5c70272b9ef974adc3adb3b2fb6b6a7b 728 Gene3D G3DSA:2.170.130.10 45 160 4.5E-21 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_06460 5c70272b9ef974adc3adb3b2fb6b6a7b 728 SUPERFAMILY SSF56935 32 728 6.41E-82 T 12-10-2018 K04M3_06460 5c70272b9ef974adc3adb3b2fb6b6a7b 728 Pfam PF00593 TonB dependent receptor 246 727 1.2E-28 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 SUPERFAMILY SSF81338 9 254 4.32E-75 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 Gene3D G3DSA:1.20.1080.10 4 260 1.5E-96 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 Pfam PF00230 Major intrinsic protein 6 252 4.3E-64 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 7.5E-69 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 4.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 4.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 4.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 4.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 4.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_25150 196a87d3ba4bd89a3ab745f6647eede6 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 4.9E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_26690 1d45b7a01a40f8b0475fe58c82789289 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.3E-82 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 K04M3_26690 1d45b7a01a40f8b0475fe58c82789289 208 SUPERFAMILY SSF53335 14 204 2.17E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_26690 1d45b7a01a40f8b0475fe58c82789289 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.968 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 K04M3_26690 1d45b7a01a40f8b0475fe58c82789289 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 K04M3_26690 1d45b7a01a40f8b0475fe58c82789289 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 4.6E-71 T 12-10-2018 K04M3_26690 1d45b7a01a40f8b0475fe58c82789289 208 Gene3D G3DSA:3.40.50.150 2 206 5.2E-76 T 12-10-2018 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 6.8E-16 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 138 152 6.8E-16 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 191 204 6.8E-16 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 95 107 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 394 4.2E-55 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 SUPERFAMILY SSF53335 1 396 4.76E-71 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 Gene3D G3DSA:3.40.50.150 6 390 3.2E-83 T 12-10-2018 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 Gene3D G3DSA:3.90.120.10 187 385 3.2E-83 T 12-10-2018 K04M3_25040 73a880f4ccb49446d01f33b7cd39c72b 403 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 395 1.1E-56 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_33190 c11f241a81fcf1d1c2a32f1762f68aa7 610 Pfam PF04183 IucA / IucC family 162 372 4.1E-33 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 K04M3_33190 c11f241a81fcf1d1c2a32f1762f68aa7 610 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 556 2.9E-14 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain K04M3_33190 c11f241a81fcf1d1c2a32f1762f68aa7 610 Gene3D G3DSA:1.10.510.40 363 543 1.1E-9 T 12-10-2018 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 5.7E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 Pfam PF12019 Type II transport protein GspH 45 183 6.1E-9 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 PRINTS PR00885 Bacterial general secretion pathway protein H signature 5 19 5.9E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 PRINTS PR00885 Bacterial general secretion pathway protein H signature 146 161 5.9E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 PRINTS PR00885 Bacterial general secretion pathway protein H signature 20 34 5.9E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 SUPERFAMILY SSF54523 10 94 6.12E-10 T 12-10-2018 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 Gene3D G3DSA:3.55.40.10 36 202 1.2E-45 T 12-10-2018 K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.8E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01230 3577633ea2ebe073b850d9a65860bb54 202 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 6 170 8.6E-13 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 K04M3_24270 35b392525edba89fab8b656971195fd0 159 Gene3D G3DSA:3.10.50.30 76 159 1.1E-7 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 K04M3_24270 35b392525edba89fab8b656971195fd0 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 1.0E-7 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 K04M3_24270 35b392525edba89fab8b656971195fd0 159 PIRSF PIRSF006092 1 159 1.8E-7 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 K04M3_24270 35b392525edba89fab8b656971195fd0 159 SUPERFAMILY SSF54534 81 158 6.67E-11 T 12-10-2018 K04M3_33970 67d05c0de30125657220b7acb313307f 166 Pfam PF02469 Fasciclin domain 43 165 6.2E-37 T 12-10-2018 IPR000782 FAS1 domain K04M3_33970 67d05c0de30125657220b7acb313307f 166 Gene3D G3DSA:2.30.180.10 8 166 7.2E-52 T 12-10-2018 IPR036378 FAS1 domain superfamily K04M3_33970 67d05c0de30125657220b7acb313307f 166 SMART SM00554 67 166 3.2E-32 T 12-10-2018 IPR000782 FAS1 domain K04M3_33970 67d05c0de30125657220b7acb313307f 166 SUPERFAMILY SSF82153 24 165 2.88E-43 T 12-10-2018 IPR036378 FAS1 domain superfamily K04M3_43010 e5fc565e38648de1d6d625b159b891a8 410 Gene3D G3DSA:1.20.1250.20 3 399 1.3E-56 T 12-10-2018 K04M3_43010 e5fc565e38648de1d6d625b159b891a8 410 SUPERFAMILY SSF103473 9 398 9.16E-56 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_43010 e5fc565e38648de1d6d625b159b891a8 410 Pfam PF07690 Major Facilitator Superfamily 15 295 5.3E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_03700 2f131f85f30e0e246b88c9a93ee5e340 587 SUPERFAMILY SSF55729 313 496 6.89E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_03700 2f131f85f30e0e246b88c9a93ee5e340 587 SMART SM00563 75 199 3.8E-4 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_03700 2f131f85f30e0e246b88c9a93ee5e340 587 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 3.2E-21 T 12-10-2018 K04M3_03700 2f131f85f30e0e246b88c9a93ee5e340 587 Gene3D G3DSA:3.40.630.30 312 456 1.3E-6 T 12-10-2018 K04M3_03700 2f131f85f30e0e246b88c9a93ee5e340 587 SUPERFAMILY SSF69593 47 161 6.67E-8 T 12-10-2018 K04M3_48790 d1963e29ca2a8735de9166a225289538 161 Gene3D G3DSA:3.10.180.10 1 150 1.0E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_48790 d1963e29ca2a8735de9166a225289538 161 SUPERFAMILY SSF54593 1 150 1.11E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_48790 d1963e29ca2a8735de9166a225289538 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 K04M3_48790 d1963e29ca2a8735de9166a225289538 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 6.6E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 SUPERFAMILY SSF111369 51 266 1.03E-42 T 12-10-2018 K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 Gene3D G3DSA:2.40.50.100 61 189 4.6E-75 T 12-10-2018 K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 Gene3D G3DSA:2.40.30.170 51 272 4.6E-75 T 12-10-2018 K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 Gene3D G3DSA:1.10.287.470 96 155 4.6E-75 T 12-10-2018 K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 262 1.9E-29 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 346 1.8E-76 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_00330 8591194a9fdac1827c6cd6d560031964 361 Gene3D G3DSA:2.40.420.20 273 344 4.6E-75 T 12-10-2018 K04M3_29740 8e61b10663f1fbce33d9d26b0da95215 295 Pfam PF00892 EamA-like transporter family 157 294 5.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_29740 8e61b10663f1fbce33d9d26b0da95215 295 Pfam PF00892 EamA-like transporter family 4 135 3.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_29740 8e61b10663f1fbce33d9d26b0da95215 295 SUPERFAMILY SSF103481 36 140 7.19E-12 T 12-10-2018 K04M3_29740 8e61b10663f1fbce33d9d26b0da95215 295 SUPERFAMILY SSF103481 207 293 2.62E-10 T 12-10-2018 K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 1.6E-125 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 1.1E-114 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 5.3E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 SUPERFAMILY SSF56935 24 713 6.96E-112 T 12-10-2018 K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 Gene3D G3DSA:2.40.170.20 166 713 1.6E-79 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 Pfam PF00593 TonB dependent receptor 233 711 2.1E-48 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_35260 bf9533d009fe56e2931f245b39fa1f0c 713 Gene3D G3DSA:2.170.130.10 28 155 1.0E-28 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_43900 0658242e177cfe9ea267a3fd0f208f07 454 PIRSF PIRSF006446 2 453 8.8E-216 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_43900 0658242e177cfe9ea267a3fd0f208f07 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.3E-163 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_08610 88a78fc5764d35e317d58f7cc7d0379d 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.4E-67 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 K04M3_08610 88a78fc5764d35e317d58f7cc7d0379d 233 SUPERFAMILY SSF53067 112 219 2.33E-28 T 12-10-2018 K04M3_08610 88a78fc5764d35e317d58f7cc7d0379d 233 SUPERFAMILY SSF53067 4 106 2.12E-31 T 12-10-2018 K04M3_08610 88a78fc5764d35e317d58f7cc7d0379d 233 Pfam PF00814 Glycoprotease family 31 155 1.9E-31 T 12-10-2018 IPR000905 Gcp-like domain K04M3_08610 88a78fc5764d35e317d58f7cc7d0379d 233 Gene3D G3DSA:3.30.420.40 5 202 7.9E-85 T 12-10-2018 K04M3_08610 88a78fc5764d35e317d58f7cc7d0379d 233 Gene3D G3DSA:3.30.420.40 96 190 7.9E-85 T 12-10-2018 K04M3_20310 68cf8aac7b5c60887b936d695ff56f83 131 Gene3D G3DSA:3.10.129.10 1 131 8.5E-40 T 12-10-2018 K04M3_20310 68cf8aac7b5c60887b936d695ff56f83 131 SUPERFAMILY SSF54637 9 129 2.64E-38 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_20310 68cf8aac7b5c60887b936d695ff56f83 131 Pfam PF03061 Thioesterase superfamily 26 97 2.1E-19 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 K04M3_12340 e10c2958a1c1f3a54c43748e29d82db0 247 Pfam PF07070 SpoOM protein 2 215 3.1E-63 T 12-10-2018 IPR009776 Sporulation stage 0, protein M K04M3_01110 5f98ae11aad3bdef0d89a84b7a82d116 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.659 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial K04M3_01110 5f98ae11aad3bdef0d89a84b7a82d116 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 7.6E-81 T 12-10-2018 IPR017039 Virulence factor BrkB K04M3_01110 5f98ae11aad3bdef0d89a84b7a82d116 314 PIRSF PIRSF035875 10 295 5.2E-53 T 12-10-2018 IPR017039 Virulence factor BrkB K04M3_01110 5f98ae11aad3bdef0d89a84b7a82d116 314 Pfam PF03631 Virulence factor BrkB 33 280 2.4E-58 T 12-10-2018 IPR017039 Virulence factor BrkB K04M3_26320 761dd2f0f9c37231390630028c8bb199 246 SUPERFAMILY SSF160950 1 245 1.31E-93 T 12-10-2018 IPR036268 ZapD domain superfamily K04M3_26320 761dd2f0f9c37231390630028c8bb199 246 Pfam PF07072 Cell division protein 18 224 1.3E-75 T 12-10-2018 IPR009777 Cell division protein ZapD K04M3_26320 761dd2f0f9c37231390630028c8bb199 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.881 T 12-10-2018 IPR009777 Cell division protein ZapD K04M3_26320 761dd2f0f9c37231390630028c8bb199 246 Gene3D G3DSA:2.60.440.10 6 245 2.3E-88 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal K04M3_26320 761dd2f0f9c37231390630028c8bb199 246 Gene3D G3DSA:1.10.3900.10 12 178 2.3E-88 T 12-10-2018 K04M3_43370 57fae0449bb76b61ba4765c81df8e141 302 SUPERFAMILY SSF53807 20 282 1.64E-59 T 12-10-2018 K04M3_43370 57fae0449bb76b61ba4765c81df8e141 302 Gene3D G3DSA:3.40.50.1980 25 280 2.2E-90 T 12-10-2018 K04M3_43370 57fae0449bb76b61ba4765c81df8e141 302 Gene3D G3DSA:3.40.50.1980 171 274 2.2E-90 T 12-10-2018 K04M3_43370 57fae0449bb76b61ba4765c81df8e141 302 Pfam PF01497 Periplasmic binding protein 48 275 2.4E-20 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain K04M3_23580 1d00eacc7a9cf2330032e999bc84dd68 189 SUPERFAMILY SSF52218 4 186 1.01E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_23580 1d00eacc7a9cf2330032e999bc84dd68 189 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 186 3.3E-39 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 K04M3_23580 1d00eacc7a9cf2330032e999bc84dd68 189 Gene3D G3DSA:3.40.50.360 1 188 1.2E-61 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_23580 1d00eacc7a9cf2330032e999bc84dd68 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 K04M3_23580 1d00eacc7a9cf2330032e999bc84dd68 189 Pfam PF03358 NADPH-dependent FMN reductase 13 135 1.0E-11 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 K04M3_12100 a9396735bbce5806cc56e555e8336d28 411 Pfam PF00266 Aminotransferase class-V 26 401 6.7E-68 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_12100 a9396735bbce5806cc56e555e8336d28 411 Gene3D G3DSA:3.40.640.10 33 289 2.1E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_12100 a9396735bbce5806cc56e555e8336d28 411 SUPERFAMILY SSF53383 3 410 7.34E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_12100 a9396735bbce5806cc56e555e8336d28 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 8.7E-164 T 12-10-2018 IPR011340 Cysteine desulfurase-related K04M3_12100 a9396735bbce5806cc56e555e8336d28 411 Gene3D G3DSA:3.90.1150.10 24 405 2.1E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_22190 593f00ccd87e4ab73491125443ad9f2b 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.051 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 K04M3_22190 593f00ccd87e4ab73491125443ad9f2b 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 2.1E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 K04M3_22190 593f00ccd87e4ab73491125443ad9f2b 181 SUPERFAMILY SSF53271 11 178 3.9E-53 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_22190 593f00ccd87e4ab73491125443ad9f2b 181 Gene3D G3DSA:3.40.50.2020 1 181 5.7E-67 T 12-10-2018 K04M3_22190 593f00ccd87e4ab73491125443ad9f2b 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 1.0E-72 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 K04M3_16960 714231e95974dd56e0819fef2885dd48 112 SUPERFAMILY SSF47413 5 75 1.49E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_16960 714231e95974dd56e0819fef2885dd48 112 Pfam PF12844 Helix-turn-helix domain 10 70 4.9E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_16960 714231e95974dd56e0819fef2885dd48 112 Gene3D G3DSA:1.10.260.40 7 105 3.1E-23 T 12-10-2018 K04M3_16960 714231e95974dd56e0819fef2885dd48 112 SMART SM00530 10 69 3.6E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_29880 8c6c97925595fbff4efb1cf9783d7e6a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.916 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 K04M3_29880 8c6c97925595fbff4efb1cf9783d7e6a 125 SUPERFAMILY SSF81343 7 125 4.14E-51 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29880 8c6c97925595fbff4efb1cf9783d7e6a 125 Gene3D G3DSA:1.20.1300.10 6 125 1.6E-44 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_29880 8c6c97925595fbff4efb1cf9783d7e6a 125 PIRSF PIRSF000179 6 125 1.7E-56 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 K04M3_29880 8c6c97925595fbff4efb1cf9783d7e6a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 3.6E-44 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 K04M3_29880 8c6c97925595fbff4efb1cf9783d7e6a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 3.0E-49 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 K04M3_23150 573f16d462f0ea4e6f4f2e4a9e14dbb4 731 Gene3D G3DSA:1.10.443.10 331 540 6.6E-10 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_23150 573f16d462f0ea4e6f4f2e4a9e14dbb4 731 Pfam PF00589 Phage integrase family 352 539 2.1E-6 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_23150 573f16d462f0ea4e6f4f2e4a9e14dbb4 731 SUPERFAMILY SSF56349 351 541 5.3E-9 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 SMART SM00934 5 226 1.6E-101 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 SUPERFAMILY SSF51366 1 229 2.12E-77 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 3.1E-51 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 2.1E-58 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 Gene3D G3DSA:3.20.20.70 2 232 7.6E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_20810 adbe7823c7b4a12e8945709b7c8c2f35 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.317 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 K04M3_43700 1770037b24094c487cc7690ae1727433 486 Gene3D G3DSA:3.40.309.10 251 444 1.1E-179 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_43700 1770037b24094c487cc7690ae1727433 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.427 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 K04M3_43700 1770037b24094c487cc7690ae1727433 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 K04M3_43700 1770037b24094c487cc7690ae1727433 486 Gene3D G3DSA:3.40.605.10 8 472 1.1E-179 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_43700 1770037b24094c487cc7690ae1727433 486 SUPERFAMILY SSF53720 5 480 1.06E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_43700 1770037b24094c487cc7690ae1727433 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 2.0E-176 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_43700 1770037b24094c487cc7690ae1727433 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 2.4E-202 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 K04M3_13440 f2f703f3a9a59c84ec0b40fa22145171 376 Pfam PF04209 homogentisate 1,2-dioxygenase 84 374 3.1E-22 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 K04M3_13440 f2f703f3a9a59c84ec0b40fa22145171 376 SUPERFAMILY SSF51182 56 374 7.23E-92 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_13440 f2f703f3a9a59c84ec0b40fa22145171 376 Gene3D G3DSA:2.60.120.10 65 167 9.5E-13 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_20710 e6ca0a19424511f8f4de78407439a47f 376 Pfam PF03916 Polysulphide reductase, NrfD 9 318 6.2E-21 T 12-10-2018 IPR005614 NrfD family K04M3_28720 c9825ad1307c9c0fe6d623005d4570e7 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.4E-45 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 K04M3_28720 c9825ad1307c9c0fe6d623005d4570e7 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 K04M3_28720 c9825ad1307c9c0fe6d623005d4570e7 139 Gene3D G3DSA:2.60.120.460 2 139 6.1E-43 T 12-10-2018 IPR035917 YjbQ-like superfamily K04M3_28720 c9825ad1307c9c0fe6d623005d4570e7 139 PIRSF PIRSF004681 1 139 3.7E-47 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 K04M3_28720 c9825ad1307c9c0fe6d623005d4570e7 139 SUPERFAMILY SSF111038 1 139 6.02E-50 T 12-10-2018 IPR035917 YjbQ-like superfamily K04M3_28720 c9825ad1307c9c0fe6d623005d4570e7 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.0E-39 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 K04M3_18450 6fc49a491b8dd69b9ffe64a86c123a7c 211 Pfam PF04986 Putative transposase 138 202 1.2E-9 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 K04M3_18450 6fc49a491b8dd69b9ffe64a86c123a7c 211 Pfam PF14319 Transposase zinc-binding domain 7 114 4.1E-35 T 12-10-2018 IPR026889 Transposase zinc-binding domain K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 2.9E-14 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 Gene3D G3DSA:1.10.357.10 51 203 1.0E-26 T 12-10-2018 K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 SUPERFAMILY SSF46689 3 69 4.49E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 Gene3D G3DSA:1.10.10.60 3 50 3.4E-12 T 12-10-2018 K04M3_48080 7e33c9a0fd8863f6b2ee2f3c0a956353 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_18150 d45089a7b465ea71157077b021607dc8 156 Gene3D G3DSA:3.40.630.30 4 151 1.5E-28 T 12-10-2018 K04M3_18150 d45089a7b465ea71157077b021607dc8 156 Pfam PF00583 Acetyltransferase (GNAT) family 36 143 1.8E-14 T 12-10-2018 IPR000182 GNAT domain K04M3_18150 d45089a7b465ea71157077b021607dc8 156 SUPERFAMILY SSF55729 1 143 2.29E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_21590 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 K04M3_21590 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.5E-61 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_21590 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.24 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 K04M3_21590 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 1.4E-64 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 SUPERFAMILY SSF46785 7 88 2.2E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 Gene3D G3DSA:3.40.190.10 93 295 1.5E-67 T 12-10-2018 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 SUPERFAMILY SSF53850 92 298 1.03E-39 T 12-10-2018 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 Gene3D G3DSA:1.10.10.10 3 91 7.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 Gene3D G3DSA:3.40.190.10 172 271 1.5E-67 T 12-10-2018 K04M3_00160 d58d0c1c1bd60181ca472cf89d8cc760 314 Pfam PF03466 LysR substrate binding domain 100 299 2.9E-22 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 171 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 3.4E-35 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 3.4E-35 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 3.4E-35 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.4E-35 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.4E-35 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.4E-35 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 SUPERFAMILY SSF56327 170 441 9.71E-70 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 4.9E-46 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 3.8E-45 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 SUPERFAMILY SSF51735 3 164 1.16E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Gene3D G3DSA:3.90.110.10 170 442 1.8E-85 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 K04M3_44130 89bca7c3f9ec9f16f76ec3215d4abcaa 442 Gene3D G3DSA:3.40.50.720 1 167 2.9E-50 T 12-10-2018 K04M3_27010 19408216772e24b3fd2d22c743aee1c9 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 176 4.7E-9 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 K04M3_27010 19408216772e24b3fd2d22c743aee1c9 192 SUPERFAMILY SSF101327 6 178 9.29E-46 T 12-10-2018 IPR036255 YgfB-like superfamily K04M3_27010 19408216772e24b3fd2d22c743aee1c9 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 1.1E-35 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 K04M3_27010 19408216772e24b3fd2d22c743aee1c9 192 Gene3D G3DSA:1.20.120.740 4 192 9.2E-48 T 12-10-2018 K04M3_27010 19408216772e24b3fd2d22c743aee1c9 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.528 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 K04M3_23700 24e5a80acddebfd4b522afa22cf0cb5a 136 Pfam PF13508 Acetyltransferase (GNAT) domain 46 119 6.9E-10 T 12-10-2018 IPR000182 GNAT domain K04M3_23700 24e5a80acddebfd4b522afa22cf0cb5a 136 Gene3D G3DSA:3.40.630.30 2 132 1.9E-29 T 12-10-2018 K04M3_23700 24e5a80acddebfd4b522afa22cf0cb5a 136 SUPERFAMILY SSF55729 13 122 2.96E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_28340 2ff1f94064fb90f06dcb19753bab86a9 281 Pfam PF13401 AAA domain 42 168 6.0E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_28340 2ff1f94064fb90f06dcb19753bab86a9 281 SUPERFAMILY SSF52540 12 260 7.54E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28340 2ff1f94064fb90f06dcb19753bab86a9 281 Gene3D G3DSA:3.40.50.300 28 183 2.3E-13 T 12-10-2018 K04M3_15460 5159977e302370b4cecdfc49b8d4991b 390 SUPERFAMILY SSF53756 10 359 6.28E-28 T 12-10-2018 K04M3_15460 5159977e302370b4cecdfc49b8d4991b 390 Gene3D G3DSA:3.40.50.2000 175 350 9.8E-21 T 12-10-2018 K04M3_15460 5159977e302370b4cecdfc49b8d4991b 390 Gene3D G3DSA:3.40.50.2000 10 358 9.8E-21 T 12-10-2018 K04M3_15460 5159977e302370b4cecdfc49b8d4991b 390 Pfam PF00534 Glycosyl transferases group 1 197 339 1.8E-12 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_52230 fe67b16db346d5ace0511cba03bbe2e7 257 SUPERFAMILY SSF56112 136 187 4.6E-5 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_15310 67273bb7742045772e84470e182c76d0 434 Pfam PF06629 MltA-interacting protein MipA 41 237 2.8E-23 T 12-10-2018 IPR010583 MltA-interacting MipA K04M3_36780 63285cc0f0fd4fae8924bfbc618feb8b 314 SUPERFAMILY SSF53613 6 306 4.21E-64 T 12-10-2018 IPR029056 Ribokinase-like K04M3_36780 63285cc0f0fd4fae8924bfbc618feb8b 314 Pfam PF00294 pfkB family carbohydrate kinase 7 307 1.2E-48 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_36780 63285cc0f0fd4fae8924bfbc618feb8b 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 K04M3_36780 63285cc0f0fd4fae8924bfbc618feb8b 314 Gene3D G3DSA:3.40.1190.20 4 312 7.2E-67 T 12-10-2018 IPR029056 Ribokinase-like K04M3_48770 1daf5e3f43f1ffa36df885adae86987c 178 Gene3D G3DSA:1.20.58.320 1 77 1.4E-26 T 12-10-2018 K04M3_48770 1daf5e3f43f1ffa36df885adae86987c 178 Gene3D G3DSA:1.25.40.10 78 178 2.6E-32 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_48770 1daf5e3f43f1ffa36df885adae86987c 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 4.3E-62 T 12-10-2018 IPR010323 Protein of unknown function DUF924 K04M3_48770 1daf5e3f43f1ffa36df885adae86987c 178 SUPERFAMILY SSF48452 2 174 3.22E-67 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_03240 86ec3da248886b19dc2c11ba21260d0c 358 Gene3D G3DSA:3.20.20.70 1 358 9.8E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_03240 86ec3da248886b19dc2c11ba21260d0c 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 336 2.2E-89 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 K04M3_03240 86ec3da248886b19dc2c11ba21260d0c 358 SUPERFAMILY SSF51395 6 357 1.34E-115 T 12-10-2018 K04M3_37160 f01412829679ad34fff8d117007b8f20 352 Pfam PF00267 Gram-negative porin 39 350 1.3E-15 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 K04M3_37160 f01412829679ad34fff8d117007b8f20 352 SUPERFAMILY SSF56935 22 351 4.07E-52 T 12-10-2018 K04M3_37160 f01412829679ad34fff8d117007b8f20 352 Gene3D G3DSA:2.40.160.10 22 352 1.9E-53 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_26840 46735337c4b7dc190b37087bb9bb30a1 207 Gene3D G3DSA:1.20.1440.120 48 206 4.1E-53 T 12-10-2018 K04M3_26840 46735337c4b7dc190b37087bb9bb30a1 207 SUPERFAMILY SSF57863 55 133 1.02E-12 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger K04M3_26840 46735337c4b7dc190b37087bb9bb30a1 207 Gene3D G3DSA:2.40.50.140 1 47 8.3E-15 T 12-10-2018 K04M3_26840 46735337c4b7dc190b37087bb9bb30a1 207 Pfam PF02565 Recombination protein O C terminal 52 194 5.3E-24 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 K04M3_26840 46735337c4b7dc190b37087bb9bb30a1 207 TIGRFAM TIGR00613 reco: DNA repair protein RecO 2 198 1.2E-30 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 K04M3_26840 46735337c4b7dc190b37087bb9bb30a1 207 Pfam PF11967 Recombination protein O N terminal 2 45 5.2E-10 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.3E-24 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.3E-24 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 1.3E-24 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.3E-24 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.3E-24 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 Gene3D G3DSA:3.40.50.2300 1 149 1.0E-57 T 12-10-2018 K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 SMART SM00226 2 148 1.3E-44 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 SUPERFAMILY SSF52788 1 149 2.09E-48 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily K04M3_21190 faa8f1f0a548c98b407a1dd24e013c2e 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 4.0E-38 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 7.0E-174 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 SUPERFAMILY SSF56059 1 238 5.13E-79 T 12-10-2018 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 PIRSF PIRSF001554 1 388 4.7E-154 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 Pfam PF08442 ATP-grasp domain 2 203 3.7E-79 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.175 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 SUPERFAMILY SSF52210 239 385 4.58E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 Pfam PF00549 CoA-ligase 262 382 9.4E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 Gene3D G3DSA:3.30.1490.20 21 104 9.6E-92 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 Gene3D G3DSA:3.30.470.20 1 234 9.6E-92 T 12-10-2018 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_08440 700bac088960f0a0cfe1b293ecbae96c 388 Gene3D G3DSA:3.40.50.261 240 388 1.7E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 K04M3_31600 4874e2e9727ba945db1be90a290c53ba 290 SUPERFAMILY SSF51658 31 256 9.94E-11 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily K04M3_31600 4874e2e9727ba945db1be90a290c53ba 290 Hamap MF_00697 UPF0276 protein . 10 282 44.348 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 K04M3_31600 4874e2e9727ba945db1be90a290c53ba 290 Gene3D G3DSA:3.20.20.150 7 280 3.6E-87 T 12-10-2018 K04M3_31600 4874e2e9727ba945db1be90a290c53ba 290 Pfam PF05114 Protein of unknown function (DUF692) 10 273 9.5E-107 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 K04M3_13260 7c2ee1ed6bc16efff94779bf647005bc 333 PIRSF PIRSF029792 1 333 7.0E-138 T 12-10-2018 IPR008794 Proline racemase family K04M3_13260 7c2ee1ed6bc16efff94779bf647005bc 333 SUPERFAMILY SSF54506 3 330 4.49E-117 T 12-10-2018 K04M3_13260 7c2ee1ed6bc16efff94779bf647005bc 333 Gene3D G3DSA:3.10.310.10 144 309 2.3E-113 T 12-10-2018 K04M3_13260 7c2ee1ed6bc16efff94779bf647005bc 333 Gene3D G3DSA:3.10.310.10 7 331 2.3E-113 T 12-10-2018 K04M3_13260 7c2ee1ed6bc16efff94779bf647005bc 333 Pfam PF05544 Proline racemase 8 330 2.2E-128 T 12-10-2018 IPR008794 Proline racemase family K04M3_30230 054eef913999b1e32ed0c4c92f9c8f57 295 PIRSF PIRSF000401 1 295 3.8E-100 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 K04M3_30230 054eef913999b1e32ed0c4c92f9c8f57 295 SUPERFAMILY SSF53335 44 274 1.48E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_30230 054eef913999b1e32ed0c4c92f9c8f57 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.771 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 K04M3_30230 054eef913999b1e32ed0c4c92f9c8f57 295 Gene3D G3DSA:3.40.50.150 102 294 4.8E-56 T 12-10-2018 K04M3_30230 054eef913999b1e32ed0c4c92f9c8f57 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.4E-105 T 12-10-2018 K04M3_30230 054eef913999b1e32ed0c4c92f9c8f57 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 2.5E-109 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 K04M3_48810 b09923869f2c096afbc2edc8736a2c6c 378 SUPERFAMILY SSF56281 98 352 8.13E-31 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_48810 b09923869f2c096afbc2edc8736a2c6c 378 Gene3D G3DSA:3.60.15.10 84 368 4.3E-72 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_48810 b09923869f2c096afbc2edc8736a2c6c 378 Pfam PF12706 Beta-lactamase superfamily domain 116 316 8.7E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_22760 836f09ad9c4961235ab8d882b7585a45 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_22760 836f09ad9c4961235ab8d882b7585a45 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_22760 836f09ad9c4961235ab8d882b7585a45 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_22760 836f09ad9c4961235ab8d882b7585a45 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_22760 836f09ad9c4961235ab8d882b7585a45 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.4E-33 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 K04M3_22760 836f09ad9c4961235ab8d882b7585a45 89 PIRSF PIRSF004669 1 89 8.7E-30 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_48480 092d7267cd230bd94d13971098a75857 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 5.5E-66 T 12-10-2018 IPR021438 Protein of unknown function DUF3087 K04M3_11390 b953cad04fbbbfa7613948297eb97496 263 Pfam PF00005 ABC transporter 30 178 4.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_11390 b953cad04fbbbfa7613948297eb97496 263 SMART SM00382 38 227 5.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_11390 b953cad04fbbbfa7613948297eb97496 263 Gene3D G3DSA:3.40.50.300 1 263 3.5E-69 T 12-10-2018 K04M3_11390 b953cad04fbbbfa7613948297eb97496 263 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_11390 b953cad04fbbbfa7613948297eb97496 263 SUPERFAMILY SSF52540 3 253 1.06E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_36210 a25d0644247e5a20737513c7724c9cf3 178 SUPERFAMILY SSF89028 7 169 1.16E-36 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 K04M3_36210 a25d0644247e5a20737513c7724c9cf3 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 3.0E-60 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 K04M3_36210 a25d0644247e5a20737513c7724c9cf3 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 5.5E-16 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 K04M3_36210 a25d0644247e5a20737513c7724c9cf3 178 Gene3D G3DSA:1.20.1200.10 17 173 2.8E-24 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 5.4E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 5.4E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 5.4E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 Pfam PF00364 Biotin-requiring enzyme 78 152 1.7E-25 T 12-10-2018 IPR000089 Biotin/lipoyl attachment K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 1.2E-62 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 Gene3D G3DSA:2.40.50.100 76 153 5.5E-32 T 12-10-2018 K04M3_30210 82feae0e4c18e77c74b5fba2e3c140c3 153 SUPERFAMILY SSF51230 78 153 2.36E-26 T 12-10-2018 IPR011053 Single hybrid motif K04M3_32610 8e88427507944f086cc110857f17c73b 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 1.3E-12 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted K04M3_32610 8e88427507944f086cc110857f17c73b 227 Gene3D G3DSA:3.10.620.30 26 219 4.4E-71 T 12-10-2018 K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 Gene3D G3DSA:3.30.70.270 243 400 1.4E-12 T 12-10-2018 K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 SMART SM00052 399 644 5.5E-79 T 12-10-2018 IPR001633 EAL domain K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 SUPERFAMILY SSF141868 404 650 2.48E-73 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 262 384 1.4E-6 T 12-10-2018 IPR000160 GGDEF domain K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 SUPERFAMILY SSF55073 255 389 5.1E-11 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 Pfam PF00563 EAL domain 405 639 3.3E-62 T 12-10-2018 IPR001633 EAL domain K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 SMART SM00267 230 389 6.2E-5 T 12-10-2018 IPR000160 GGDEF domain K04M3_52210 90ff63cc1f5810eaa010e40d025ee7a7 671 Gene3D G3DSA:3.20.20.450 401 655 1.6E-81 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_04700 a9997a2b71c798464ef5e6b6ef574556 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.1E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 K04M3_04700 a9997a2b71c798464ef5e6b6ef574556 183 Gene3D G3DSA:1.20.120.520 1 152 1.4E-16 T 12-10-2018 K04M3_26920 41e0214240300651742c6f06340344fd 192 SUPERFAMILY SSF88946 2 107 2.04E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_26920 41e0214240300651742c6f06340344fd 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_26920 41e0214240300651742c6f06340344fd 192 Gene3D G3DSA:1.10.10.10 122 192 2.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26920 41e0214240300651742c6f06340344fd 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 9.7E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 K04M3_26920 41e0214240300651742c6f06340344fd 192 SUPERFAMILY SSF88659 124 184 1.63E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_26920 41e0214240300651742c6f06340344fd 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 K04M3_26920 41e0214240300651742c6f06340344fd 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 1.5E-103 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_26920 41e0214240300651742c6f06340344fd 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 K04M3_26920 41e0214240300651742c6f06340344fd 192 Gene3D G3DSA:1.10.1740.10 1 121 1.4E-45 T 12-10-2018 K04M3_10750 af817c7f6d57e9e19ad650aec6a25f82 256 SUPERFAMILY SSF47240 11 255 7.61E-75 T 12-10-2018 IPR009078 Ferritin-like superfamily K04M3_10750 af817c7f6d57e9e19ad650aec6a25f82 256 PIRSF PIRSF020736 2 256 1.4E-92 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 K04M3_10750 af817c7f6d57e9e19ad650aec6a25f82 256 Gene3D G3DSA:1.20.1260.10 96 256 8.1E-56 T 12-10-2018 IPR012347 Ferritin-like K04M3_10750 af817c7f6d57e9e19ad650aec6a25f82 256 Gene3D G3DSA:1.20.1260.10 7 76 1.7E-16 T 12-10-2018 IPR012347 Ferritin-like K04M3_10750 af817c7f6d57e9e19ad650aec6a25f82 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 3.3E-120 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 K04M3_15330 9f5f7f34dda7beb877536c377d648497 194 SUPERFAMILY SSF52218 1 192 7.58E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_15330 9f5f7f34dda7beb877536c377d648497 194 Pfam PF02525 Flavodoxin-like fold 3 190 7.2E-44 T 12-10-2018 IPR003680 Flavodoxin-like fold K04M3_15330 9f5f7f34dda7beb877536c377d648497 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.804 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 K04M3_15330 9f5f7f34dda7beb877536c377d648497 194 Gene3D G3DSA:3.40.50.360 1 194 9.6E-56 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 7.5E-54 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 Pfam PF00117 Glutamine amidotransferase class-I 6 186 3.0E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 SUPERFAMILY SSF52317 3 191 2.47E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 Gene3D G3DSA:3.40.50.880 1 193 1.2E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.5E-34 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.5E-34 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.5E-34 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.5E-34 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.5E-34 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.5E-34 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.2E-13 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.2E-13 T 12-10-2018 K04M3_20190 fcfdcf1f482a23aa13f4ddfddcfa4ab1 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.2E-13 T 12-10-2018 K04M3_21480 32e022ad56f5c3654230cbc1299d321c 151 Gene3D G3DSA:3.90.1170.40 1 149 1.9E-54 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 K04M3_21480 32e022ad56f5c3654230cbc1299d321c 151 Pfam PF02391 MoaE protein 9 120 1.3E-36 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 K04M3_21480 32e022ad56f5c3654230cbc1299d321c 151 SUPERFAMILY SSF54690 4 149 1.44E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 SMART SM00422 1 70 6.5E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 Pfam PF13411 MerR HTH family regulatory protein 1 66 8.9E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 Gene3D G3DSA:1.10.1660.10 1 118 3.6E-35 T 12-10-2018 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.9E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.9E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.9E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_36450 e3a107995292cd1da8e9171dd757c272 118 SUPERFAMILY SSF46955 1 114 9.89E-32 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 Pfam PF00155 Aminotransferase class I and II 43 387 9.6E-75 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 SUPERFAMILY SSF53383 4 395 1.29E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.325 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 Gene3D G3DSA:3.40.640.10 58 296 1.8E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 Gene3D G3DSA:3.90.1150.10 40 387 1.8E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_34830 e1261b7d030f928d5575c320b7383ac4 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.5E-206 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 K04M3_36880 626a283bda69008668d337b93f88caa8 194 Pfam PF02525 Flavodoxin-like fold 3 182 7.1E-36 T 12-10-2018 IPR003680 Flavodoxin-like fold K04M3_36880 626a283bda69008668d337b93f88caa8 194 SUPERFAMILY SSF52218 1 192 1.69E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_36880 626a283bda69008668d337b93f88caa8 194 Gene3D G3DSA:3.40.50.360 1 194 2.7E-53 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_34060 e226cc9a8c9dbcedbb8b66248e9b8f45 96 SUPERFAMILY SSF54909 1 80 5.37E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_34060 e226cc9a8c9dbcedbb8b66248e9b8f45 96 Gene3D G3DSA:3.30.70.100 1 89 1.9E-26 T 12-10-2018 K04M3_34060 e226cc9a8c9dbcedbb8b66248e9b8f45 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.7E-19 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain K04M3_01930 d56a4bbfbb6e039e5d75be5183e7d2e6 328 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 3.2E-78 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_01930 d56a4bbfbb6e039e5d75be5183e7d2e6 328 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 49.148 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 K04M3_01930 d56a4bbfbb6e039e5d75be5183e7d2e6 328 PIRSF PIRSF026649 12 313 3.0E-82 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_01930 d56a4bbfbb6e039e5d75be5183e7d2e6 328 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 4.3E-110 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 K04M3_02030 89a2b351f81850a2334228a06503828f 319 Pfam PF02706 Chain length determinant protein 21 121 5.3E-15 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 K04M3_02030 89a2b351f81850a2334228a06503828f 319 Pfam PF13807 G-rich domain on putative tyrosine kinase 248 312 1.8E-8 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 SUPERFAMILY SSF160240 226 303 2.88E-24 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 Gene3D G3DSA:3.30.70.1350 223 306 1.6E-31 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 302 1.9E-67 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 Pfam PF01545 Cation efflux family 31 222 2.1E-42 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 Pfam PF16916 Dimerisation domain of Zinc Transporter 226 302 4.8E-26 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 SUPERFAMILY SSF161111 24 223 6.02E-50 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily K04M3_29980 68c21a2ce7e9ef0a5022458b4cff7344 318 Gene3D G3DSA:1.20.1510.10 24 222 5.7E-59 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily K04M3_19510 5079d3d51d1e5e72c3f88af2b0b564bf 155 SUPERFAMILY SSF55729 1 141 4.79E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_19510 5079d3d51d1e5e72c3f88af2b0b564bf 155 Gene3D G3DSA:3.40.630.30 2 152 1.8E-14 T 12-10-2018 K04M3_19510 5079d3d51d1e5e72c3f88af2b0b564bf 155 Pfam PF00583 Acetyltransferase (GNAT) family 24 133 3.0E-7 T 12-10-2018 IPR000182 GNAT domain K04M3_40420 53c91e1391786a664c74c60629224b2a 395 Pfam PF00155 Aminotransferase class I and II 27 389 8.2E-65 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_40420 53c91e1391786a664c74c60629224b2a 395 PRINTS PR00799 Aspartate aminotransferase signature 338 356 9.4E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_40420 53c91e1391786a664c74c60629224b2a 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 9.4E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_40420 53c91e1391786a664c74c60629224b2a 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 9.4E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_40420 53c91e1391786a664c74c60629224b2a 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 9.4E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 K04M3_40420 53c91e1391786a664c74c60629224b2a 395 Gene3D G3DSA:3.90.1150.10 11 389 5.4E-136 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_40420 53c91e1391786a664c74c60629224b2a 395 SUPERFAMILY SSF53383 1 393 2.83E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_40420 53c91e1391786a664c74c60629224b2a 395 Gene3D G3DSA:3.40.640.10 45 312 5.4E-136 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_46700 152b2897d97588e4c0489af646084297 96 Gene3D G3DSA:1.10.10.10 28 83 5.0E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46700 152b2897d97588e4c0489af646084297 96 SUPERFAMILY SSF88659 37 80 2.4E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like K04M3_46700 152b2897d97588e4c0489af646084297 96 Pfam PF02001 Protein of unknown function DUF134 2 89 6.7E-21 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 K04M3_46700 152b2897d97588e4c0489af646084297 96 Hamap MF_00674 UPF0251 protein . 2 95 24.209 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 SUPERFAMILY SSF55120 6 339 4.03E-98 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 Gene3D G3DSA:3.30.2340.10 170 302 9.6E-107 T 12-10-2018 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 Gene3D G3DSA:3.30.2350.20 18 337 9.6E-107 T 12-10-2018 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 3.2E-42 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 2.0E-23 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_26710 a4ffe9bb942753ee19ed28a413edd23e 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.988 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_23130 2ddb2cde3d89e51d533d99835c0673f2 467 SUPERFAMILY SSF56349 162 446 3.53E-23 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_23130 2ddb2cde3d89e51d533d99835c0673f2 467 Gene3D G3DSA:1.10.443.10 234 457 5.7E-25 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_23130 2ddb2cde3d89e51d533d99835c0673f2 467 Pfam PF00589 Phage integrase family 250 443 6.5E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_15170 db7a2a7e02cf760e5bb13a3fb06a0c78 292 SUPERFAMILY SSF46785 4 84 8.16E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_15170 db7a2a7e02cf760e5bb13a3fb06a0c78 292 Pfam PF03466 LysR substrate binding domain 89 289 3.4E-36 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_15170 db7a2a7e02cf760e5bb13a3fb06a0c78 292 Gene3D G3DSA:3.40.190.290 91 290 6.5E-57 T 12-10-2018 K04M3_15170 db7a2a7e02cf760e5bb13a3fb06a0c78 292 Gene3D G3DSA:1.10.10.10 3 90 8.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_15170 db7a2a7e02cf760e5bb13a3fb06a0c78 292 SUPERFAMILY SSF53850 89 291 3.26E-37 T 12-10-2018 K04M3_15170 db7a2a7e02cf760e5bb13a3fb06a0c78 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_47950 5b846b005607f5b0f9e4d2e0bd59b51e 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 4.4E-208 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ K04M3_47950 5b846b005607f5b0f9e4d2e0bd59b51e 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 615 6.9E-72 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit K04M3_24650 834b7aa0cd7f1bee4a87e00fb7021d82 334 Gene3D G3DSA:3.10.520.20 15 334 2.8E-113 T 12-10-2018 K04M3_24650 834b7aa0cd7f1bee4a87e00fb7021d82 334 PIRSF PIRSF006268 1 334 6.0E-95 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 K04M3_24650 834b7aa0cd7f1bee4a87e00fb7021d82 334 Pfam PF02424 ApbE family 31 310 1.7E-85 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 K04M3_24650 834b7aa0cd7f1bee4a87e00fb7021d82 334 SUPERFAMILY SSF143631 24 332 4.18E-101 T 12-10-2018 IPR003374 ApbE-like superfamily K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 SUPERFAMILY SSF52058 230 295 2.13E-5 T 12-10-2018 K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 Gene3D G3DSA:3.80.10.10 218 528 8.6E-58 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 SUPERFAMILY SSF52058 279 517 1.02E-42 T 12-10-2018 K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 SMART SM00369 477 500 280.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 SMART SM00369 339 361 40.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 SMART SM00369 362 385 0.2 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype K04M3_40680 ca5aa2f1cb59eee00c598028a331d75d 535 SMART SM00369 431 453 34.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype K04M3_44720 cfa56113aff99159f63893983bbeb1e0 429 SUPERFAMILY SSF56235 10 202 6.02E-17 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_44720 cfa56113aff99159f63893983bbeb1e0 429 Gene3D G3DSA:3.60.60.10 223 409 1.3E-32 T 12-10-2018 K04M3_44720 cfa56113aff99159f63893983bbeb1e0 429 Gene3D G3DSA:3.60.60.10 5 209 7.4E-30 T 12-10-2018 K04M3_44720 cfa56113aff99159f63893983bbeb1e0 429 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 13 203 1.3E-10 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal K04M3_44720 cfa56113aff99159f63893983bbeb1e0 429 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 231 350 2.3E-11 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal K04M3_44720 cfa56113aff99159f63893983bbeb1e0 429 SUPERFAMILY SSF56235 227 394 2.08E-19 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 152 170 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 73 94 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 108 125 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 128 151 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 26 48 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 171 192 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 PRINTS PR00721 Stomatin signature 196 219 1.8E-63 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_43630 4056a6391929bb67b837307934b466b3 260 SMART SM00244 19 176 7.7E-65 T 12-10-2018 IPR001107 Band 7 domain K04M3_43630 4056a6391929bb67b837307934b466b3 260 Gene3D G3DSA:3.30.479.30 47 178 5.3E-49 T 12-10-2018 K04M3_43630 4056a6391929bb67b837307934b466b3 260 SUPERFAMILY SSF117892 50 183 2.48E-43 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_43630 4056a6391929bb67b837307934b466b3 260 Pfam PF01145 SPFH domain / Band 7 family 24 192 1.1E-35 T 12-10-2018 IPR001107 Band 7 domain K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 Gene3D G3DSA:1.10.8.630 4 113 3.7E-35 T 12-10-2018 K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 2.6E-192 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 Pfam PF00271 Helicase conserved C-terminal domain 499 588 1.8E-8 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 Gene3D G3DSA:3.40.50.300 185 379 3.9E-77 T 12-10-2018 K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 SMART SM00487 196 395 1.7E-16 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.306 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 Pfam PF00270 DEAD/DEAH box helicase 219 364 1.7E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 SUPERFAMILY SSF52540 71 379 9.02E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 SMART SM00490 492 589 3.9E-13 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_02600 2742f1dfe4973fef85fd1c5a12dc314d 733 SUPERFAMILY SSF52540 460 631 7.98E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_20610 8dfbd81d87948f0b6e5ec96012b227d9 186 SUPERFAMILY SSF55729 1 157 6.13E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_20610 8dfbd81d87948f0b6e5ec96012b227d9 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 146 6.5E-18 T 12-10-2018 IPR000182 GNAT domain K04M3_20610 8dfbd81d87948f0b6e5ec96012b227d9 186 Gene3D G3DSA:3.40.630.30 2 177 1.5E-28 T 12-10-2018 K04M3_46040 f73958c99dc8a367d6114e36eaffbd95 382 SUPERFAMILY SSF53383 3 380 1.69E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_46040 f73958c99dc8a367d6114e36eaffbd95 382 Gene3D G3DSA:3.90.1150.10 15 378 2.3E-110 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_46040 f73958c99dc8a367d6114e36eaffbd95 382 Gene3D G3DSA:3.40.640.10 60 273 2.3E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_46040 f73958c99dc8a367d6114e36eaffbd95 382 Pfam PF00155 Aminotransferase class I and II 26 375 1.8E-31 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 Gene3D G3DSA:3.90.190.20 288 419 7.1E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 Pfam PF08245 Mur ligase middle domain 54 193 8.2E-7 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 Gene3D G3DSA:3.40.1190.10 1 287 3.9E-91 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 SUPERFAMILY SSF53244 288 416 3.53E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 1.8E-103 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 SUPERFAMILY SSF53623 12 285 1.04E-84 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 PIRSF PIRSF001563 7 420 2.7E-104 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 K04M3_22270 7d4242f68470fbf9e2343804871457f2 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.803 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 12-10-2018 K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 2.3E-108 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 5.2E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 Gene3D G3DSA:1.10.443.10 121 298 1.4E-56 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 Pfam PF00589 Phage integrase family 122 290 2.8E-48 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 Gene3D G3DSA:1.10.150.130 14 108 2.4E-17 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_31250 f2a4e95e1a41aeca02c9267d973fcebd 310 SUPERFAMILY SSF56349 116 302 2.53E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.7E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 Gene3D G3DSA:2.40.50.100 56 216 1.1E-53 T 12-10-2018 K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 Gene3D G3DSA:2.40.420.20 40 367 1.1E-53 T 12-10-2018 K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 Gene3D G3DSA:2.40.30.170 45 307 1.1E-53 T 12-10-2018 K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 5.4E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 SUPERFAMILY SSF111369 49 253 1.31E-15 T 12-10-2018 K04M3_20600 db965752b70c7cdbac74474f6acdd059 377 Gene3D G3DSA:1.10.287.470 90 176 1.1E-53 T 12-10-2018 K04M3_00420 c5ca8af87c5642871a9bed411afbae7e 241 Gene3D G3DSA:1.20.120.710 15 109 1.5E-57 T 12-10-2018 K04M3_00420 c5ca8af87c5642871a9bed411afbae7e 241 Gene3D G3DSA:3.40.50.1000 3 232 1.5E-57 T 12-10-2018 IPR023214 HAD superfamily K04M3_00420 c5ca8af87c5642871a9bed411afbae7e 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 203 2.7E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_00420 c5ca8af87c5642871a9bed411afbae7e 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 111 209 1.6E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_00420 c5ca8af87c5642871a9bed411afbae7e 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 6.5E-22 T 12-10-2018 K04M3_00420 c5ca8af87c5642871a9bed411afbae7e 241 SUPERFAMILY SSF56784 3 237 2.85E-40 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_40190 d0bfe08c7ce7acf5320b531d85429228 522 Pfam PF08811 Protein of unknown function (DUF1800) 43 504 7.9E-87 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 PRINTS PR00313 NodO calcium binding signature 6064 6075 1.5E-5 T 12-10-2018 K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 PRINTS PR00313 NodO calcium binding signature 6094 6103 1.5E-5 T 12-10-2018 K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 PRINTS PR00313 NodO calcium binding signature 6085 6093 1.5E-5 T 12-10-2018 K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 PRINTS PR00313 NodO calcium binding signature 6076 6084 1.5E-5 T 12-10-2018 K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 6114 6203 2.5E-13 T 12-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6081 6099 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1009 1081 8.0E-4 T 12-10-2018 IPR010221 VCBS repeat K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 SUPERFAMILY SSF51120 5988 6141 2.75E-17 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1812 1952 1.2E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1955 2089 6.0E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 811 951 6.5E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3570 3703 6.3E-48 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1097 1237 1.2E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2384 2524 3.9E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 507 666 1.2E-27 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3420 3565 8.6E-43 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1526 1666 2.0E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1240 1380 3.3E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3118 3259 1.3E-40 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 668 807 6.3E-52 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1383 1521 3.5E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3267 3413 5.8E-46 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2670 2811 7.0E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2098 2237 1.3E-52 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1669 1809 1.3E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 954 1094 3.4E-57 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2969 3116 1.5E-46 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2816 2962 7.6E-43 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2527 2667 5.5E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2241 2379 5.0E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain K04M3_43280 c28e1de7b568a2cc12b933e698d28065 6206 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6072 6090 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 4.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 Gene3D G3DSA:2.60.120.10 16 291 4.1E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 Gene3D G3DSA:1.10.441.10 159 316 4.1E-129 T 12-10-2018 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 Pfam PF01238 Phosphomannose isomerase type I 12 369 5.9E-85 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 PIRSF PIRSF001480 8 405 5.7E-101 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 397 6.5E-92 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 SUPERFAMILY SSF51182 9 394 3.98E-103 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_40210 e11a4a0f84af24b0eb41f120f8f9599d 405 Gene3D G3DSA:2.60.120.10 317 397 4.1E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 Pfam PF00072 Response regulator receiver domain 4 117 4.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 7.3E-41 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 SMART SM00448 2 116 9.2E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 Gene3D G3DSA:3.40.50.2300 3 132 1.2E-29 T 12-10-2018 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 SMART SM00331 164 393 4.7E-24 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 SUPERFAMILY SSF81606 172 364 1.78E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 Gene3D G3DSA:3.60.40.10 133 393 1.5E-55 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_38930 643c27a7a453ad11b5d3001290742bb0 409 SUPERFAMILY SSF52172 2 156 4.98E-33 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_14970 15bd90cc05df3d6f002ec9982a5da727 207 Pfam PF01810 LysE type translocator 15 203 4.5E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_14970 15bd90cc05df3d6f002ec9982a5da727 207 PIRSF PIRSF006324 1 207 5.7E-61 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 Gene3D G3DSA:3.40.50.150 39 259 2.3E-75 T 12-10-2018 K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 258 8.5E-103 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 SUPERFAMILY SSF53335 27 257 4.34E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.482 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 K04M3_00850 9d861af659b0017fa4f04a040ca01950 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 6.4E-83 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 K04M3_40220 46347943d57208ab623403248fcb09b4 446 Gene3D G3DSA:1.20.1250.20 238 438 4.9E-44 T 12-10-2018 K04M3_40220 46347943d57208ab623403248fcb09b4 446 Pfam PF07690 Major Facilitator Superfamily 36 396 3.8E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_40220 46347943d57208ab623403248fcb09b4 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 5.7E-139 T 12-10-2018 K04M3_40220 46347943d57208ab623403248fcb09b4 446 PIRSF PIRSF002808 7 443 5.8E-145 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 K04M3_40220 46347943d57208ab623403248fcb09b4 446 SUPERFAMILY SSF103473 17 441 1.09E-80 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_40220 46347943d57208ab623403248fcb09b4 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 K04M3_40220 46347943d57208ab623403248fcb09b4 446 Gene3D G3DSA:1.20.1250.20 19 223 1.0E-52 T 12-10-2018 K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 Gene3D G3DSA:2.30.30.240 101 182 3.6E-31 T 12-10-2018 K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.4E-55 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.743 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 Pfam PF01782 RimM N-terminal domain 15 95 7.6E-25 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 Pfam PF05239 PRC-barrel domain 103 177 9.7E-12 T 12-10-2018 IPR027275 PRC-barrel domain K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 SUPERFAMILY SSF50346 106 182 4.51E-20 T 12-10-2018 IPR011033 PRC-barrel-like superfamily K04M3_26360 7c29242eb73d252655ca6c957d6d1b5c 182 Gene3D G3DSA:2.40.30.60 4 100 6.4E-33 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 292 1.4E-64 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 43.97 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 SMART SM00046 4 131 1.3E-12 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 Gene3D G3DSA:3.40.50.10330 23 286 6.1E-79 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 SUPERFAMILY SSF111331 3 296 2.09E-74 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 Gene3D G3DSA:2.60.200.40 124 284 6.1E-79 T 12-10-2018 K04M3_43050 dd7a3fb16b492fffc11efea03fcd8c3b 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 126 3.2E-27 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 K04M3_29200 d2415ea40ef245a1bfcbf468d1c72765 75 Pfam PF04102 SlyX 9 75 9.1E-24 T 12-10-2018 IPR007236 SlyX K04M3_29200 d2415ea40ef245a1bfcbf468d1c72765 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.417 T 12-10-2018 IPR007236 SlyX K04M3_29200 d2415ea40ef245a1bfcbf468d1c72765 75 Gene3D G3DSA:1.20.5.300 2 51 5.5E-7 T 12-10-2018 K04M3_28170 58d7752b1c2cbb8155ed91f44a6c0f5f 1293 Pfam PF13116 Protein of unknown function 506 792 8.0E-93 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 K04M3_28170 58d7752b1c2cbb8155ed91f44a6c0f5f 1293 Pfam PF13502 AsmA-like C-terminal region 1031 1271 1.5E-56 T 12-10-2018 IPR032712 AsmA-like, C-terminal K04M3_28170 58d7752b1c2cbb8155ed91f44a6c0f5f 1293 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1281 0.0 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 K04M3_01640 055d1f1b121a41b19920633e20c6ff3e 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 9.4E-72 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_01640 055d1f1b121a41b19920633e20c6ff3e 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.834 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 K04M3_01640 055d1f1b121a41b19920633e20c6ff3e 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 308 6.3E-133 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 K04M3_01640 055d1f1b121a41b19920633e20c6ff3e 316 PIRSF PIRSF026649 6 312 1.6E-79 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 PIRSF PIRSF001394 1 505 1.2E-217 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-98 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.8E-63 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05683 Fumarase C-terminus 289 490 3.5E-84 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 K04M3_19420 5467c0337b26c44c4c60e1d1b834efd1 505 Gene3D G3DSA:3.20.130.10 305 490 1.3E-62 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 K04M3_41230 23bc8d0d3e51ceda85dc6cc935deb61c 129 SMART SM00881 7 102 4.2E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 K04M3_41230 23bc8d0d3e51ceda85dc6cc935deb61c 129 Pfam PF13380 CoA binding domain 12 99 1.2E-16 T 12-10-2018 IPR003781 CoA-binding GO:0048037 K04M3_41230 23bc8d0d3e51ceda85dc6cc935deb61c 129 SUPERFAMILY SSF51735 2 100 8.59E-25 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_41230 23bc8d0d3e51ceda85dc6cc935deb61c 129 Gene3D G3DSA:3.40.50.720 1 111 2.4E-26 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 445 528 1.5E-18 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 342 440 2.09E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 358 444 1.8E-23 T 12-10-2018 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 429 539 2.09E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-230 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 190 260 6.0E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 275 347 1.8E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 103 171 1.2E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 362 434 1.9E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 449 520 1.9E-18 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 19 87 0.0012 T 12-10-2018 IPR022967 RNA-binding domain, S1 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 PIRSF PIRSF002111 1 534 5.6E-218 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 K04M3_20850 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 12-10-2018 K04M3_24230 af99727eac26c3b7997151833b48af63 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 5.8E-20 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 K04M3_45620 cac3a90487e804fe1d78b035ca999463 205 SUPERFAMILY SSF53474 3 188 1.78E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 7.9E-104 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 Gene3D G3DSA:3.40.50.620 1 179 2.6E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 5.5E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.7E-100 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 Gene3D G3DSA:3.30.1300.10 181 283 2.7E-26 T 12-10-2018 K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 SUPERFAMILY SSF52374 1 280 1.27E-106 T 12-10-2018 K04M3_26130 e5fa6e7070ad4389d277fd16edaff4db 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.123 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 SUPERFAMILY SSF51971 376 625 1.35E-41 T 12-10-2018 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.4E-9 T 12-10-2018 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.4E-9 T 12-10-2018 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 Gene3D G3DSA:3.20.20.70 4 370 9.2E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 1.3E-82 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 Gene3D G3DSA:3.50.50.60 471 623 1.4E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 SUPERFAMILY SSF51395 4 364 6.84E-108 T 12-10-2018 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 Gene3D G3DSA:3.40.50.720 377 664 1.4E-108 T 12-10-2018 K04M3_21950 158d12e35ee00de1350639d3594fe56a 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 630 4.2E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 K04M3_46470 a714030f714a865618b40946acb0f122 218 SUPERFAMILY SSF48498 92 207 4.08E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_46470 a714030f714a865618b40946acb0f122 218 SUPERFAMILY SSF46689 9 85 4.51E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_46470 a714030f714a865618b40946acb0f122 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 65 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_46470 a714030f714a865618b40946acb0f122 218 Gene3D G3DSA:1.10.357.10 1 217 6.3E-59 T 12-10-2018 K04M3_43930 a01d080fa3a48b62c6a095193e9d1eee 251 PIRSF PIRSF016184 1 250 9.0E-52 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_43930 a01d080fa3a48b62c6a095193e9d1eee 251 Pfam PF02567 Phenazine biosynthesis-like protein 7 220 6.3E-37 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_43930 a01d080fa3a48b62c6a095193e9d1eee 251 Gene3D G3DSA:3.10.310.10 114 245 3.1E-64 T 12-10-2018 K04M3_43930 a01d080fa3a48b62c6a095193e9d1eee 251 SUPERFAMILY SSF54506 3 247 5.01E-60 T 12-10-2018 K04M3_43930 a01d080fa3a48b62c6a095193e9d1eee 251 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 223 3.1E-23 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_43930 a01d080fa3a48b62c6a095193e9d1eee 251 Gene3D G3DSA:3.10.310.10 6 246 3.1E-64 T 12-10-2018 K04M3_03310 e9369327da609532ca4a3fe797295efd 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site K04M3_03310 e9369327da609532ca4a3fe797295efd 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site K04M3_03310 e9369327da609532ca4a3fe797295efd 323 Pfam PF00348 Polyprenyl synthetase 32 273 4.4E-73 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 K04M3_03310 e9369327da609532ca4a3fe797295efd 323 Gene3D G3DSA:1.10.600.10 1 323 7.8E-119 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily K04M3_03310 e9369327da609532ca4a3fe797295efd 323 SUPERFAMILY SSF48576 4 322 2.08E-98 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 SUPERFAMILY SSF52540 247 437 2.14E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 SMART SM00670 7 141 2.7E-11 T 12-10-2018 IPR002716 PIN domain K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 SUPERFAMILY SSF88723 7 160 4.12E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 Pfam PF02562 PhoH-like protein 248 452 1.6E-53 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 Gene3D G3DSA:3.40.50.1010 3 155 8.4E-28 T 12-10-2018 K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 Gene3D G3DSA:3.40.50.300 245 456 1.0E-64 T 12-10-2018 K04M3_28140 f3aef50867ffb613aa0a11f72c1507f0 458 Pfam PF13638 PIN domain 9 150 4.7E-35 T 12-10-2018 IPR002716 PIN domain K04M3_37920 3e64a3dc7db37737004b273fa375f7bc 117 Pfam PF11225 Protein of unknown function (DUF3024) 58 116 3.9E-18 T 12-10-2018 IPR021388 Bacteriophage 933W, L0084 K04M3_28250 b9bbfdbe82edf62a50878803a08f0efa 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.2E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_28250 b9bbfdbe82edf62a50878803a08f0efa 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.7E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_47190 d805cd0809284ef8bd27dc87841da953 120 PIRSF PIRSF002889 1 120 1.5E-31 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 K04M3_47190 d805cd0809284ef8bd27dc87841da953 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site K04M3_47190 d805cd0809284ef8bd27dc87841da953 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 K04M3_47190 d805cd0809284ef8bd27dc87841da953 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 6.9E-33 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 K04M3_46260 6b62bf01b309a2d8b5902c36a11e253d 135 Pfam PF12614 Ribosome recycling factor 9 133 6.2E-58 T 12-10-2018 IPR022253 Ribosome recycling factor. bacterial K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.6E-58 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 SUPERFAMILY SSF100950 1 146 3.16E-47 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 Gene3D G3DSA:3.30.70.260 125 196 3.0E-78 T 12-10-2018 K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.6E-68 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 SUPERFAMILY SSF75445 127 198 1.09E-23 T 12-10-2018 K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.46 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 K04M3_27040 c6a8ea31e71fed90bd0394616a019d65 218 Gene3D G3DSA:3.40.50.1360 7 207 3.0E-78 T 12-10-2018 K04M3_21460 ca927ab60fed1718ba786df1cbf59d02 306 SUPERFAMILY SSF161098 88 291 1.85E-20 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_21460 ca927ab60fed1718ba786df1cbf59d02 306 Gene3D G3DSA:1.10.3720.10 84 301 5.1E-22 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_21460 ca927ab60fed1718ba786df1cbf59d02 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.5E-41 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_34850 84714f5dfbde127f53c0ac25bca4b226 177 Pfam PF05229 Spore Coat Protein U domain 25 174 6.1E-21 T 12-10-2018 IPR007893 Spore coat protein U K04M3_34850 84714f5dfbde127f53c0ac25bca4b226 177 SMART SM00972 118 174 1.0E-5 T 12-10-2018 IPR007893 Spore coat protein U K04M3_11200 fa70ca8e9947fa966d8e66d7f6a1a2ee 245 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 1.2E-104 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 K04M3_11200 fa70ca8e9947fa966d8e66d7f6a1a2ee 245 Gene3D G3DSA:3.60.21.10 1 234 4.1E-17 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_11200 fa70ca8e9947fa966d8e66d7f6a1a2ee 245 SUPERFAMILY SSF56300 1 223 1.26E-30 T 12-10-2018 K04M3_11200 fa70ca8e9947fa966d8e66d7f6a1a2ee 245 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 205 4.3E-7 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 K04M3_11200 fa70ca8e9947fa966d8e66d7f6a1a2ee 245 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 122.098 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 K04M3_20870 181122f7e0df1fc0e4af83981cf5adfc 353 Pfam PF01343 Peptidase family S49 166 314 4.6E-47 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 K04M3_20870 181122f7e0df1fc0e4af83981cf5adfc 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.0E-56 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 K04M3_20870 181122f7e0df1fc0e4af83981cf5adfc 353 Gene3D G3DSA:3.40.1750.20 206 270 6.4E-45 T 12-10-2018 K04M3_20870 181122f7e0df1fc0e4af83981cf5adfc 353 Gene3D G3DSA:3.90.226.10 109 306 6.4E-45 T 12-10-2018 K04M3_20870 181122f7e0df1fc0e4af83981cf5adfc 353 SUPERFAMILY SSF52096 103 303 4.21E-29 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_23040 e4f8a693c3437176b2297ef0d4d39fcf 95 Pfam PF09904 Winged helix-turn helix 4 91 6.7E-38 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 K04M3_23040 e4f8a693c3437176b2297ef0d4d39fcf 95 PIRSF PIRSF037266 1 94 2.7E-41 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 K04M3_23040 e4f8a693c3437176b2297ef0d4d39fcf 95 Gene3D G3DSA:1.10.10.10 2 95 8.7E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_01870 f22bd7d01384e977cb8572de73fc3a7c 226 SUPERFAMILY SSF53448 1 224 7.74E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01870 f22bd7d01384e977cb8572de73fc3a7c 226 Gene3D G3DSA:3.90.550.10 2 224 2.1E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_01870 f22bd7d01384e977cb8572de73fc3a7c 226 Pfam PF02348 Cytidylyltransferase 7 137 1.8E-9 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 K04M3_30870 658549411e39e0113850c2a652265ccd 369 Gene3D G3DSA:3.40.1350.30 45 189 4.0E-140 T 12-10-2018 K04M3_30870 658549411e39e0113850c2a652265ccd 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 2.6E-191 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 K04M3_30870 658549411e39e0113850c2a652265ccd 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site K04M3_30870 658549411e39e0113850c2a652265ccd 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.954 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 K04M3_30870 658549411e39e0113850c2a652265ccd 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 1.4E-187 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 K04M3_30870 658549411e39e0113850c2a652265ccd 369 SUPERFAMILY SSF53335 10 367 8.44E-56 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_30870 658549411e39e0113850c2a652265ccd 369 Gene3D G3DSA:3.40.50.150 13 364 4.0E-140 T 12-10-2018 K04M3_30870 658549411e39e0113850c2a652265ccd 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site K04M3_16400 1c004921c1a34e3e5ae0e44f80646849 416 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 402 1.5E-105 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type K04M3_16400 1c004921c1a34e3e5ae0e44f80646849 416 Pfam PF04403 Paraquat-inducible protein A 54 205 7.7E-37 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like K04M3_16400 1c004921c1a34e3e5ae0e44f80646849 416 Pfam PF04403 Paraquat-inducible protein A 248 404 5.7E-47 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like K04M3_19690 b7f0bdece06c131a4ad3e0c54c559a7d 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.9E-27 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ K04M3_02730 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 3.9E-56 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_02730 98717f215155676eca4114be3006e924 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 K04M3_02730 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_02730 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.363 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 K04M3_02730 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 K04M3_02730 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 K04M3_02730 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_24100 8858cec26c94425557b0c7c98699b539 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.1 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 K04M3_24100 8858cec26c94425557b0c7c98699b539 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.0E-48 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 K04M3_49540 53a25813d07ab15ba0419192398c0a04 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 1.9E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_49540 53a25813d07ab15ba0419192398c0a04 251 Gene3D G3DSA:3.40.190.10 110 212 3.9E-12 T 12-10-2018 K04M3_49540 53a25813d07ab15ba0419192398c0a04 251 Gene3D G3DSA:3.40.190.10 33 250 3.9E-12 T 12-10-2018 K04M3_49540 53a25813d07ab15ba0419192398c0a04 251 SUPERFAMILY SSF53850 28 250 1.19E-21 T 12-10-2018 K04M3_34300 7e149aa26cacc1d05cab7c5178c30485 256 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 36 243 1.9E-43 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_34300 7e149aa26cacc1d05cab7c5178c30485 256 SUPERFAMILY SSF51569 35 248 3.98E-61 T 12-10-2018 K04M3_34300 7e149aa26cacc1d05cab7c5178c30485 256 ProSitePatterns PS01054 Transaldolase signature 1. 57 65 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 K04M3_34300 7e149aa26cacc1d05cab7c5178c30485 256 Gene3D G3DSA:3.20.20.70 29 252 1.1E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 Pfam PF01327 Polypeptide deformylase 4 152 5.2E-46 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 SUPERFAMILY SSF56420 2 164 3.66E-55 T 12-10-2018 IPR036821 Peptide deformylase superfamily K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 PIRSF PIRSF004749 1 168 1.4E-50 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 Gene3D G3DSA:3.90.45.10 1 168 9.8E-62 T 12-10-2018 IPR036821 Peptide deformylase superfamily K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 2.8E-49 T 12-10-2018 IPR023635 Peptide deformylase K04M3_42560 0e6c41d39cad42c833e3f941c77b7430 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.698 T 12-10-2018 IPR023635 Peptide deformylase K04M3_36830 c83aaeba2d8e290684f5f7bd30073aeb 263 SUPERFAMILY SSF54506 1 263 3.25E-74 T 12-10-2018 K04M3_36830 c83aaeba2d8e290684f5f7bd30073aeb 263 Gene3D G3DSA:3.10.310.10 5 255 2.3E-82 T 12-10-2018 K04M3_36830 c83aaeba2d8e290684f5f7bd30073aeb 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 260 1.2E-30 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_36830 c83aaeba2d8e290684f5f7bd30073aeb 263 Gene3D G3DSA:3.10.310.10 119 251 2.3E-82 T 12-10-2018 K04M3_36830 c83aaeba2d8e290684f5f7bd30073aeb 263 PIRSF PIRSF016184 1 263 1.8E-50 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_36830 c83aaeba2d8e290684f5f7bd30073aeb 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 7.6E-55 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_40310 ebe3691465265e47d4b9614f59e13402 266 SUPERFAMILY SSF54506 2 265 8.03E-71 T 12-10-2018 K04M3_40310 ebe3691465265e47d4b9614f59e13402 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 261 1.7E-64 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_40310 ebe3691465265e47d4b9614f59e13402 266 PIRSF PIRSF016184 1 265 1.2E-52 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_40310 ebe3691465265e47d4b9614f59e13402 266 Gene3D G3DSA:3.10.310.10 116 253 6.7E-84 T 12-10-2018 K04M3_40310 ebe3691465265e47d4b9614f59e13402 266 Gene3D G3DSA:3.10.310.10 6 261 6.7E-84 T 12-10-2018 K04M3_40310 ebe3691465265e47d4b9614f59e13402 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 265 1.3E-41 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 K04M3_27820 6920cb9d8301983ec84ab47728a7ed7b 137 Pfam PF06877 Regulator of ribonuclease activity B 18 120 1.7E-34 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain K04M3_27820 6920cb9d8301983ec84ab47728a7ed7b 137 Gene3D G3DSA:3.30.70.970 1 131 4.6E-59 T 12-10-2018 IPR036701 RraB-like superfamily K04M3_27820 6920cb9d8301983ec84ab47728a7ed7b 137 SUPERFAMILY SSF89946 8 126 2.35E-39 T 12-10-2018 IPR036701 RraB-like superfamily K04M3_27820 6920cb9d8301983ec84ab47728a7ed7b 137 PIRSF PIRSF018193 8 137 4.0E-58 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B K04M3_27820 6920cb9d8301983ec84ab47728a7ed7b 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.881 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B K04M3_03380 7719d9d012379a92e2714423a9fb35ff 268 SUPERFAMILY SSF56300 3 252 2.81E-58 T 12-10-2018 K04M3_03380 7719d9d012379a92e2714423a9fb35ff 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 3.7E-119 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 K04M3_03380 7719d9d012379a92e2714423a9fb35ff 268 Gene3D G3DSA:3.60.21.10 1 267 5.7E-79 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_03380 7719d9d012379a92e2714423a9fb35ff 268 PIRSF PIRSF000903 1 268 2.8E-123 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 K04M3_03380 7719d9d012379a92e2714423a9fb35ff 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 127 1.4E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_03380 7719d9d012379a92e2714423a9fb35ff 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 47.315 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 Pfam PF00072 Response regulator receiver domain 6 114 1.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 5.4E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 SUPERFAMILY SSF46894 137 228 3.12E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 Gene3D G3DSA:3.40.50.2300 3 122 1.7E-33 T 12-10-2018 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 SMART SM00448 4 114 2.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 SUPERFAMILY SSF52172 4 130 2.13E-37 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 SMART SM00862 151 227 7.8E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_45490 c6e71baf814b831e69276b0ea720c0b6 230 Gene3D G3DSA:1.10.10.10 123 230 2.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_51140 74b66564acf05180a5e6ad5c8b078b9f 323 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 81 297 2.1E-35 T 12-10-2018 IPR031618 Putative type IV secretory system protein K04M3_32120 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 12-10-2018 K04M3_32120 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 3.1E-21 T 12-10-2018 K04M3_32120 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 89 1.3E-12 T 12-10-2018 K04M3_32120 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 12-10-2018 K04M3_05250 defcae243fc49e4dfaa5314534165cb4 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.44 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD K04M3_05250 defcae243fc49e4dfaa5314534165cb4 242 Gene3D G3DSA:1.25.40.10 28 242 1.1E-54 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05250 defcae243fc49e4dfaa5314534165cb4 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 9.3E-80 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD K04M3_05250 defcae243fc49e4dfaa5314534165cb4 242 Pfam PF13525 Outer membrane lipoprotein 26 234 2.0E-79 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like K04M3_05250 defcae243fc49e4dfaa5314534165cb4 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_17110 ed86ab7f09302d10ba66a56d01701ea4 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 1.5E-16 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 K04M3_41780 8ebea344ed00bd4e3be50c35d906cccf 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 6.0E-51 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 K04M3_41780 8ebea344ed00bd4e3be50c35d906cccf 198 PIRSF PIRSF020606 1 198 2.2E-83 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 Pfam PF00106 short chain dehydrogenase 3 183 4.8E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 Gene3D G3DSA:3.40.50.720 1 238 7.1E-47 T 12-10-2018 K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.4E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.4E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.4E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_10960 73bfd3f6c46953e9ee7c31dbc8c530ad 241 SUPERFAMILY SSF51735 3 236 7.34E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.8E-77 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 Gene3D G3DSA:3.40.50.1860 4 224 7.8E-88 T 12-10-2018 K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 SUPERFAMILY SSF53681 1 116 2.03E-37 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 6.2E-62 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 SUPERFAMILY SSF53681 118 229 7.85E-35 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 K04M3_40320 b97beacf6ab54362e346146e8ae3f7d8 232 Gene3D G3DSA:3.40.50.1860 104 215 7.8E-88 T 12-10-2018 K04M3_26410 49e38774ac634427c1d207c28d214428 172 Gene3D G3DSA:3.30.1360.80 1 172 4.1E-74 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.1E-51 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.1E-51 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.1E-51 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.1E-51 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.1E-51 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 PIRSF PIRSF006160 1 162 1.7E-67 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 3.0E-80 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 SUPERFAMILY SSF63411 4 162 6.04E-67 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 K04M3_26410 49e38774ac634427c1d207c28d214428 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.3E-61 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_26410 49e38774ac634427c1d207c28d214428 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.655 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 Pfam PF13091 PLD-like domain 34 146 3.7E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 Pfam PF13091 PLD-like domain 251 402 6.2E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 PIRSF PIRSF000850 3 446 5.9E-214 T 12-10-2018 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 Gene3D G3DSA:3.30.870.10 12 441 2.3E-165 T 12-10-2018 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 Gene3D G3DSA:3.30.870.10 18 225 2.3E-165 T 12-10-2018 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 SMART SM00155 347 374 0.0083 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 SMART SM00155 126 152 5.3E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 SUPERFAMILY SSF56024 9 182 2.07E-27 T 12-10-2018 K04M3_30690 2407f40c8c71a933165818c2852b8d42 446 SUPERFAMILY SSF56024 244 425 1.02E-26 T 12-10-2018 K04M3_48030 a3bffcae61d33f8712b1f337c74c2047 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 9.1E-152 T 12-10-2018 IPR008557 Protein of unknown function DUF839 K04M3_48030 a3bffcae61d33f8712b1f337c74c2047 678 SUPERFAMILY SSF50956 520 659 2.48E-5 T 12-10-2018 K04M3_38150 c08e8c6c8afd337ace089b7f678b8534 146 Pfam PF06146 Phosphate-starvation-inducible E 64 130 6.6E-19 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like K04M3_07950 1af3c5e28a5ed4f8df342c2cc30ab22b 541 Pfam PF11658 Cellulose biosynthesis protein BcsG 18 535 7.0E-206 T 12-10-2018 IPR017744 Cellulose biosynthesis protein BcsG K04M3_07950 1af3c5e28a5ed4f8df342c2cc30ab22b 541 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 16 538 2.8E-218 T 12-10-2018 IPR017744 Cellulose biosynthesis protein BcsG K04M3_27920 b80c617a4e61311472c1c77c6cda7b97 106 Gene3D G3DSA:3.30.750.24 5 102 7.1E-13 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_27920 b80c617a4e61311472c1c77c6cda7b97 106 SUPERFAMILY SSF52091 11 97 2.55E-15 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_27920 b80c617a4e61311472c1c77c6cda7b97 106 Pfam PF13466 STAS domain 15 93 7.3E-20 T 12-10-2018 IPR002645 STAS domain K04M3_23010 0ce13804fc194c1c70538b73417f6cc5 172 Pfam PF11143 Protein of unknown function (DUF2919) 14 158 1.4E-54 T 12-10-2018 IPR021318 Protein of unknown function DUF2919 K04M3_29520 9425ff49cc7d9dd6583d99c323bc2dee 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.245 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 K04M3_29520 9425ff49cc7d9dd6583d99c323bc2dee 310 Gene3D G3DSA:1.10.20.140 115 186 1.2E-108 T 12-10-2018 K04M3_29520 9425ff49cc7d9dd6583d99c323bc2dee 310 Pfam PF01715 IPP transferase 42 287 6.9E-86 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 K04M3_29520 9425ff49cc7d9dd6583d99c323bc2dee 310 SUPERFAMILY SSF52540 10 153 6.08E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_29520 9425ff49cc7d9dd6583d99c323bc2dee 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 3.5E-115 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 K04M3_29520 9425ff49cc7d9dd6583d99c323bc2dee 310 Gene3D G3DSA:3.40.50.300 12 292 1.2E-108 T 12-10-2018 K04M3_21030 d10eb9514122c2ffcc6fcca6c35ac18b 320 SUPERFAMILY SSF52540 2 183 5.69E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_21030 d10eb9514122c2ffcc6fcca6c35ac18b 320 SUPERFAMILY SSF48019 208 319 5.78E-13 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 K04M3_21030 d10eb9514122c2ffcc6fcca6c35ac18b 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 314 1.6E-18 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_21030 d10eb9514122c2ffcc6fcca6c35ac18b 320 Pfam PF13177 DNA polymerase III, delta subunit 12 164 2.3E-45 T 12-10-2018 K04M3_21030 d10eb9514122c2ffcc6fcca6c35ac18b 320 Gene3D G3DSA:3.40.50.300 2 167 7.6E-50 T 12-10-2018 K04M3_21030 d10eb9514122c2ffcc6fcca6c35ac18b 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 198 8.1E-65 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_41770 98b6d6c6a934b5e9a2f6ded075f823d9 279 Gene3D G3DSA:2.60.120.330 1 279 1.2E-96 T 12-10-2018 IPR027443 Isopenicillin N synthase-like K04M3_41770 98b6d6c6a934b5e9a2f6ded075f823d9 279 SUPERFAMILY SSF51197 7 276 1.51E-60 T 12-10-2018 K04M3_41770 98b6d6c6a934b5e9a2f6ded075f823d9 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 3.8E-10 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain K04M3_41770 98b6d6c6a934b5e9a2f6ded075f823d9 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.2E-15 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 K04M3_36390 46c43fd82f62e54e6d03b1c527092eed 299 Pfam PF03466 LysR substrate binding domain 92 295 1.9E-22 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_36390 46c43fd82f62e54e6d03b1c527092eed 299 Gene3D G3DSA:3.40.190.290 94 295 5.4E-38 T 12-10-2018 K04M3_36390 46c43fd82f62e54e6d03b1c527092eed 299 SUPERFAMILY SSF53850 93 295 7.42E-25 T 12-10-2018 K04M3_36390 46c43fd82f62e54e6d03b1c527092eed 299 Gene3D G3DSA:1.10.10.10 8 92 3.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36390 46c43fd82f62e54e6d03b1c527092eed 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_36390 46c43fd82f62e54e6d03b1c527092eed 299 SUPERFAMILY SSF46785 9 90 3.89E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.8E-51 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 Gene3D G3DSA:1.10.540.10 1 117 1.4E-36 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 PIRSF PIRSF016578 206 382 1.9E-14 T 12-10-2018 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 PIRSF PIRSF016578 3 193 1.7E-12 T 12-10-2018 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 Gene3D G3DSA:1.20.140.10 233 379 2.9E-56 T 12-10-2018 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 Gene3D G3DSA:2.40.110.10 121 232 1.8E-41 T 12-10-2018 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 SUPERFAMILY SSF56645 1 240 1.15E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 8.6E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 SUPERFAMILY SSF47203 225 379 1.77E-61 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 K04M3_38250 03e94d01eb3d194c7bf304a91930ab9a 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 8.6E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 K04M3_23180 af0314c0d2b4740105c1f77f11ef02e2 210 SMART SM00857 1 139 2.6E-13 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_23180 af0314c0d2b4740105c1f77f11ef02e2 210 SUPERFAMILY SSF53041 2 138 6.93E-12 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 K04M3_23180 af0314c0d2b4740105c1f77f11ef02e2 210 Pfam PF00239 Resolvase, N terminal domain 2 137 1.6E-12 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 K04M3_23180 af0314c0d2b4740105c1f77f11ef02e2 210 Gene3D G3DSA:3.40.50.1390 1 150 2.4E-14 T 12-10-2018 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 2.4E-107 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 Gene3D G3DSA:3.20.20.150 10 292 7.1E-111 T 12-10-2018 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 8.1E-42 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 SMART SM00518 12 288 3.3E-122 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 SUPERFAMILY SSF51658 12 286 3.4E-99 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily K04M3_04680 7e4d46e20e0d864d0fd920294e1b78f7 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 41.842 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.1E-27 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.995 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 SUPERFAMILY SSF143034 2 63 8.24E-21 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 Gene3D G3DSA:2.40.50.530 1 64 9.7E-19 T 12-10-2018 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.9E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.9E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 K04M3_12380 267e5aad6a1add6a5bc47665b5a5bf6a 64 Pfam PF01632 Ribosomal protein L35 2 61 1.6E-21 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 4.5E-102 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 Gene3D G3DSA:3.40.50.10800 31 322 9.4E-94 T 12-10-2018 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 Gene3D G3DSA:3.40.50.10800 200 295 9.4E-94 T 12-10-2018 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 Gene3D G3DSA:3.40.50.10800 115 340 9.4E-94 T 12-10-2018 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.1E-114 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.611 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 K04M3_10500 783deecc014f9885d5d8b965a0735e2c 353 SUPERFAMILY SSF142754 28 341 4.32E-106 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 K04M3_08680 1cd2de99281767749004b6962658a92b 270 Gene3D G3DSA:3.40.50.300 1 260 1.1E-72 T 12-10-2018 K04M3_08680 1cd2de99281767749004b6962658a92b 270 PIRSF PIRSF003092 1 270 2.9E-93 T 12-10-2018 IPR025501 ATP binding protein MinD K04M3_08680 1cd2de99281767749004b6962658a92b 270 SUPERFAMILY SSF52540 1 268 9.9E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08680 1cd2de99281767749004b6962658a92b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 1.4E-19 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain K04M3_08680 1cd2de99281767749004b6962658a92b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.1E-109 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 K04M3_38200 823f8dee1106e38030e604da9ad6a95a 534 SUPERFAMILY SSF52096 237 516 6.56E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_38200 823f8dee1106e38030e604da9ad6a95a 534 Gene3D G3DSA:3.90.226.10 271 534 2.2E-100 T 12-10-2018 K04M3_38200 823f8dee1106e38030e604da9ad6a95a 534 SUPERFAMILY SSF52096 23 265 2.2E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_38200 823f8dee1106e38030e604da9ad6a95a 534 Gene3D G3DSA:3.90.226.10 1 270 6.9E-93 T 12-10-2018 K04M3_38200 823f8dee1106e38030e604da9ad6a95a 534 Pfam PF01039 Carboxyl transferase domain 48 524 4.9E-147 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 K04M3_08230 a83320ee762e14014731e9ae6a2715bb 529 SUPERFAMILY SSF51735 387 517 1.63E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_08230 a83320ee762e14014731e9ae6a2715bb 529 Pfam PF02254 TrkA-N domain 388 504 1.4E-17 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 K04M3_08230 a83320ee762e14014731e9ae6a2715bb 529 Gene3D G3DSA:3.40.50.720 379 529 1.1E-32 T 12-10-2018 K04M3_08230 a83320ee762e14014731e9ae6a2715bb 529 Gene3D G3DSA:1.20.1530.20 2 362 2.9E-48 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily K04M3_08230 a83320ee762e14014731e9ae6a2715bb 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.4E-39 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_06190 cbdb0c0856062aa3bbd0992878884df1 187 Pfam PF13505 Outer membrane protein beta-barrel domain 10 187 6.6E-26 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_06190 cbdb0c0856062aa3bbd0992878884df1 187 Gene3D G3DSA:2.40.160.20 15 187 2.0E-29 T 12-10-2018 K04M3_06190 cbdb0c0856062aa3bbd0992878884df1 187 SUPERFAMILY SSF56925 27 187 4.45E-32 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_36230 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 12-10-2018 K04M3_36230 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 2 92 9.6E-34 T 12-10-2018 K04M3_36230 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 12-10-2018 K04M3_13100 9cf61ede502811b56f57dba35c33e79d 598 Gene3D G3DSA:1.10.1370.20 219 597 9.0E-108 T 12-10-2018 K04M3_13100 9cf61ede502811b56f57dba35c33e79d 598 SUPERFAMILY SSF55486 4 576 5.13E-97 T 12-10-2018 K04M3_13100 9cf61ede502811b56f57dba35c33e79d 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 3.1E-201 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 K04M3_13100 9cf61ede502811b56f57dba35c33e79d 598 Gene3D G3DSA:1.20.140.70 19 170 2.0E-9 T 12-10-2018 K04M3_13100 9cf61ede502811b56f57dba35c33e79d 598 Pfam PF08439 Oligopeptidase F 107 174 5.8E-11 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain K04M3_13100 9cf61ede502811b56f57dba35c33e79d 598 Pfam PF01432 Peptidase family M3 339 579 1.3E-22 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 K04M3_51010 d85aec656300e54c4f1d7e563ce97cde 401 Gene3D G3DSA:3.40.30.10 242 401 3.8E-8 T 12-10-2018 K04M3_51010 d85aec656300e54c4f1d7e563ce97cde 401 SUPERFAMILY SSF52833 242 303 4.15E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_30970 b1de87bc7bdf1e1dbd72a72d7717ec0d 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 4.7E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 K04M3_48830 5bd16cf06939f101dd3cf40fcc2cfdac 81 Gene3D G3DSA:2.30.30.400 2 79 1.4E-15 T 12-10-2018 IPR038626 Rof-like superfamily K04M3_48830 5bd16cf06939f101dd3cf40fcc2cfdac 81 SUPERFAMILY SSF101744 1 80 1.31E-21 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 K04M3_48830 5bd16cf06939f101dd3cf40fcc2cfdac 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 3.1E-28 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination K04M3_48280 1e8273eeb7dc38dcbda84d6c6d77d42f 134 Gene3D G3DSA:3.30.420.270 61 129 2.9E-11 T 12-10-2018 K04M3_48280 1e8273eeb7dc38dcbda84d6c6d77d42f 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.4E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 K04M3_26680 c735479726da8629c2e9d604ae1a0705 307 Gene3D G3DSA:3.10.350.10 35 100 1.0E-11 T 12-10-2018 IPR036779 LysM domain superfamily K04M3_26680 c735479726da8629c2e9d604ae1a0705 307 SUPERFAMILY SSF51261 48 306 1.73E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_26680 c735479726da8629c2e9d604ae1a0705 307 Pfam PF01476 LysM domain 49 91 5.1E-11 T 12-10-2018 IPR018392 LysM domain K04M3_26680 c735479726da8629c2e9d604ae1a0705 307 Pfam PF01551 Peptidase family M23 208 302 5.7E-31 T 12-10-2018 IPR016047 Peptidase M23 K04M3_26680 c735479726da8629c2e9d604ae1a0705 307 Gene3D G3DSA:2.70.70.10 121 307 5.3E-38 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_26680 c735479726da8629c2e9d604ae1a0705 307 SMART SM00257 48 92 1.1E-10 T 12-10-2018 IPR018392 LysM domain K04M3_46960 ba94ade155baa23c95b5a2705ea3295d 123 SUPERFAMILY SSF54593 12 120 7.84E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_46960 ba94ade155baa23c95b5a2705ea3295d 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 1.1E-4 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_46960 ba94ade155baa23c95b5a2705ea3295d 123 Gene3D G3DSA:3.10.180.10 12 122 1.5E-17 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_46980 7259ef249369b9c63f895d8448f1bc71 203 Pfam PF01810 LysE type translocator 13 201 1.6E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_46980 7259ef249369b9c63f895d8448f1bc71 203 PIRSF PIRSF006324 1 203 5.3E-49 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 Gene3D G3DSA:2.70.98.40 1 302 6.1E-116 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 SUPERFAMILY SSF74650 1 269 2.17E-82 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 Pfam PF06165 Glycosyltransferase family 36 21 267 3.0E-84 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 SUPERFAMILY SSF48208 274 801 2.53E-108 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 Gene3D G3DSA:2.60.420.10 721 801 9.9E-30 T 12-10-2018 K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 SMART SM01068 1 63 2.3E-20 T 12-10-2018 IPR009342 Putative carbohydrate binding domain K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 2.9E-209 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain K04M3_25950 67f689e806cf643dce3f2040b4a4a71b 802 Gene3D G3DSA:1.50.10.10 311 720 3.7E-134 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 K04M3_40850 b13aa698b65215341b6fbee61a00e719 461 Pfam PF05707 Zonular occludens toxin (Zot) 2 255 9.9E-78 T 12-10-2018 IPR008900 Zona occludens toxin K04M3_35150 10c2ea838ad1cc0aabbc919c55641670 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 5.4E-35 T 12-10-2018 IPR000160 GGDEF domain K04M3_35150 10c2ea838ad1cc0aabbc919c55641670 527 SMART SM00267 358 526 1.0E-33 T 12-10-2018 IPR000160 GGDEF domain K04M3_35150 10c2ea838ad1cc0aabbc919c55641670 527 SUPERFAMILY SSF48452 36 227 3.22E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_35150 10c2ea838ad1cc0aabbc919c55641670 527 SUPERFAMILY SSF55073 374 524 1.96E-36 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_35150 10c2ea838ad1cc0aabbc919c55641670 527 Gene3D G3DSA:3.30.70.270 355 526 1.7E-43 T 12-10-2018 K04M3_35150 10c2ea838ad1cc0aabbc919c55641670 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.4E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_49510 68ab4c989ae3242d7a7bdb452fb0af07 238 Pfam PF01709 Transcriptional regulator 5 236 4.3E-71 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_49510 68ab4c989ae3242d7a7bdb452fb0af07 238 Gene3D G3DSA:3.30.70.980 83 235 2.0E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_49510 68ab4c989ae3242d7a7bdb452fb0af07 238 Gene3D G3DSA:3.30.70.980 131 202 2.0E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_49510 68ab4c989ae3242d7a7bdb452fb0af07 238 SUPERFAMILY SSF75625 1 237 2.75E-75 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_49510 68ab4c989ae3242d7a7bdb452fb0af07 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.093 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_49510 68ab4c989ae3242d7a7bdb452fb0af07 238 Gene3D G3DSA:1.10.10.200 17 78 2.7E-17 T 12-10-2018 IPR017856 Integrase-like, N-terminal K04M3_12950 d661fd862e73acc02b1b3aa3e2a5693e 110 Pfam PF06223 Minor tail protein T 3 109 9.8E-11 T 12-10-2018 IPR009350 Minor tail T K04M3_37180 db1817d545295358d742f008fa3a7ae6 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 6.3E-24 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD K04M3_09530 39ce1d093c46418eabea3170639194c5 139 SUPERFAMILY SSF54631 1 127 4.42E-31 T 12-10-2018 K04M3_09530 39ce1d093c46418eabea3170639194c5 139 Pfam PF00571 CBS domain 73 127 1.8E-12 T 12-10-2018 IPR000644 CBS domain K04M3_09530 39ce1d093c46418eabea3170639194c5 139 Pfam PF00571 CBS domain 6 61 1.9E-7 T 12-10-2018 IPR000644 CBS domain K04M3_09530 39ce1d093c46418eabea3170639194c5 139 Gene3D G3DSA:3.10.580.10 1 128 3.0E-30 T 12-10-2018 K04M3_09530 39ce1d093c46418eabea3170639194c5 139 SMART SM00116 80 128 1.0E-8 T 12-10-2018 IPR000644 CBS domain K04M3_09530 39ce1d093c46418eabea3170639194c5 139 SMART SM00116 13 61 0.049 T 12-10-2018 IPR000644 CBS domain K04M3_44970 5bc7fea89f7ed114fe52bcfc7de8f020 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 552 3.4E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_44970 5bc7fea89f7ed114fe52bcfc7de8f020 589 SUPERFAMILY SSF58104 278 586 1.96E-69 T 12-10-2018 K04M3_44970 5bc7fea89f7ed114fe52bcfc7de8f020 589 SMART SM00283 324 585 3.0E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 K04M3_44970 5bc7fea89f7ed114fe52bcfc7de8f020 589 Gene3D G3DSA:1.10.287.950 255 587 7.5E-65 T 12-10-2018 K04M3_23610 a06aa29f99ccf5acd0b03f03bc02475b 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 K04M3_23610 a06aa29f99ccf5acd0b03f03bc02475b 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 2.1E-111 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 K04M3_23610 a06aa29f99ccf5acd0b03f03bc02475b 417 Pfam PF00860 Permease family 3 371 6.1E-91 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 K04M3_47880 6916a957f535802b022be6aa883b44b2 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 2.9E-177 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 K04M3_47880 6916a957f535802b022be6aa883b44b2 414 Pfam PF03116 NQR2, RnfD, RnfE family 44 404 3.5E-105 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 K04M3_47880 6916a957f535802b022be6aa883b44b2 414 PIRSF PIRSF016055 1 412 4.3E-186 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 K04M3_47880 6916a957f535802b022be6aa883b44b2 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.335 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 K04M3_05630 4ecba34503583272c2fb7b576e2a1f89 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC K04M3_05630 4ecba34503583272c2fb7b576e2a1f89 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC K04M3_05630 4ecba34503583272c2fb7b576e2a1f89 109 SMART SM01323 17 101 1.9E-38 T 12-10-2018 IPR003849 Preprotein translocase YajC K04M3_05630 4ecba34503583272c2fb7b576e2a1f89 109 Pfam PF02699 Preprotein translocase subunit 21 98 3.9E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC K04M3_05630 4ecba34503583272c2fb7b576e2a1f89 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 4.0E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC K04M3_42820 b67d16ee1c4a09b1e28a6b020abd6afe 128 Pfam PF01124 MAPEG family 3 118 3.6E-23 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein K04M3_42820 b67d16ee1c4a09b1e28a6b020abd6afe 128 SUPERFAMILY SSF161084 2 127 2.35E-29 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily K04M3_42820 b67d16ee1c4a09b1e28a6b020abd6afe 128 Gene3D G3DSA:1.20.120.550 1 126 8.1E-28 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily K04M3_27910 c81500cd1f66a5aebc01d48124f4b2d2 84 SUPERFAMILY SSF82657 4 82 2.35E-28 T 12-10-2018 IPR036065 BolA-like superfamily K04M3_27910 c81500cd1f66a5aebc01d48124f4b2d2 84 Pfam PF01722 BolA-like protein 18 74 9.6E-15 T 12-10-2018 IPR002634 BolA protein K04M3_27910 c81500cd1f66a5aebc01d48124f4b2d2 84 PIRSF PIRSF003113 2 83 2.0E-22 T 12-10-2018 IPR002634 BolA protein K04M3_27910 c81500cd1f66a5aebc01d48124f4b2d2 84 Gene3D G3DSA:3.30.300.90 1 84 2.7E-33 T 12-10-2018 K04M3_29730 f0e119dba3843d4bc33d90843278b693 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 2.1E-48 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 K04M3_29730 f0e119dba3843d4bc33d90843278b693 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 468 1.0E-81 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 K04M3_19820 de599391dc9065607f772331bfc6d416 136 Gene3D G3DSA:1.10.8.640 28 113 3.2E-32 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily K04M3_19820 de599391dc9065607f772331bfc6d416 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 12 135 2.1E-48 T 12-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF K04M3_19820 de599391dc9065607f772331bfc6d416 136 Pfam PF03918 Cytochrome C biogenesis protein 23 135 4.2E-41 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family K04M3_42780 13c42f3928da455fd2104e30307ee96b 301 SUPERFAMILY SSF103481 193 290 4.18E-12 T 12-10-2018 K04M3_42780 13c42f3928da455fd2104e30307ee96b 301 SUPERFAMILY SSF103481 48 145 1.29E-17 T 12-10-2018 K04M3_42780 13c42f3928da455fd2104e30307ee96b 301 Pfam PF00892 EamA-like transporter family 157 286 9.7E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_42780 13c42f3928da455fd2104e30307ee96b 301 Pfam PF00892 EamA-like transporter family 11 142 6.6E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_17260 d9f71dffc5426fcb336f8b2cfed57527 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.4E-26 T 12-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related K04M3_17260 d9f71dffc5426fcb336f8b2cfed57527 94 Gene3D G3DSA:1.20.1280.80 1 92 2.2E-34 T 12-10-2018 IPR038347 TyeA superfamily K04M3_17260 d9f71dffc5426fcb336f8b2cfed57527 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 6.0E-31 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA K04M3_17260 d9f71dffc5426fcb336f8b2cfed57527 94 Pfam PF09059 TyeA 7 86 6.8E-32 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA K04M3_17260 d9f71dffc5426fcb336f8b2cfed57527 94 SUPERFAMILY SSF140591 3 92 1.22E-30 T 12-10-2018 K04M3_13190 3d4f297d84014cc25de7c6cd0a11ec38 171 Gene3D G3DSA:3.30.2010.10 74 165 1.5E-5 T 12-10-2018 K04M3_13190 3d4f297d84014cc25de7c6cd0a11ec38 171 Pfam PF01863 Protein of unknown function DUF45 94 150 1.3E-10 T 12-10-2018 IPR002725 Protein of unknown function DUF45 K04M3_03160 f947fe936b583d98eb9dd39a97554eaa 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.419 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 K04M3_03160 f947fe936b583d98eb9dd39a97554eaa 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 K04M3_03160 f947fe936b583d98eb9dd39a97554eaa 176 SUPERFAMILY SSF50324 3 175 3.01E-64 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 K04M3_03160 f947fe936b583d98eb9dd39a97554eaa 176 Gene3D G3DSA:3.90.80.10 1 175 2.0E-66 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 K04M3_03160 f947fe936b583d98eb9dd39a97554eaa 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.1E-51 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 K04M3_03810 c928001cb5215d241ca78880112d833d 203 SMART SM01207 10 185 5.3E-82 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 K04M3_03810 c928001cb5215d241ca78880112d833d 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.713 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 K04M3_03810 c928001cb5215d241ca78880112d833d 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 5.4E-49 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 K04M3_03810 c928001cb5215d241ca78880112d833d 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 9.0E-73 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 K04M3_15380 a45d1501f79ba8cb60158b37e7648c3a 157 SUPERFAMILY SSF52540 33 131 7.49E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15380 a45d1501f79ba8cb60158b37e7648c3a 157 Pfam PF13671 AAA domain 34 134 3.2E-12 T 12-10-2018 K04M3_15380 a45d1501f79ba8cb60158b37e7648c3a 157 Gene3D G3DSA:3.40.50.300 31 157 4.8E-27 T 12-10-2018 K04M3_48860 1fe1227987728387fdbbde5d502ba6ee 214 Gene3D G3DSA:2.40.160.20 22 214 1.1E-82 T 12-10-2018 K04M3_48860 1fe1227987728387fdbbde5d502ba6ee 214 Pfam PF03922 OmpW family 24 214 7.9E-73 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 K04M3_48860 1fe1227987728387fdbbde5d502ba6ee 214 SUPERFAMILY SSF56925 23 214 8.63E-34 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_02060 4078d327b99fae5992b19cb402361536 405 Pfam PF01943 Polysaccharide biosynthesis protein 8 275 3.9E-24 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 K04M3_31170 841bff965adee0af7c2550b2661f21bb 205 PIRSF PIRSF006324 1 205 3.9E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_31170 841bff965adee0af7c2550b2661f21bb 205 Pfam PF01810 LysE type translocator 15 202 1.7E-34 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_30650 9f41513aef92e0cd7f72410276fa3a6f 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 3.1E-143 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 K04M3_30650 9f41513aef92e0cd7f72410276fa3a6f 307 Gene3D G3DSA:3.40.50.300 1 307 1.2E-90 T 12-10-2018 K04M3_30650 9f41513aef92e0cd7f72410276fa3a6f 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 176.464 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 K04M3_30650 9f41513aef92e0cd7f72410276fa3a6f 307 PIRSF PIRSF000545 1 307 2.0E-143 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 K04M3_30650 9f41513aef92e0cd7f72410276fa3a6f 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 227 7.8E-12 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 K04M3_30650 9f41513aef92e0cd7f72410276fa3a6f 307 SUPERFAMILY SSF52540 3 306 5.13E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15950 46d1f448008f03c1ee4abc1b07f8b55d 293 Pfam PF15575 Immunity protein 49 71 277 6.6E-44 T 12-10-2018 IPR029074 Immunity protein 49 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 16 246 53.942 T 12-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 53 67 4.8E-5 T 12-10-2018 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 148 172 4.8E-5 T 12-10-2018 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 118 130 4.8E-5 T 12-10-2018 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 Pfam PF05175 Methyltransferase small domain 46 136 1.6E-17 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 Gene3D G3DSA:3.40.50.150 14 243 2.3E-57 T 12-10-2018 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 K04M3_04750 97b896bc7ba97c4a93a0891ae6544fac 246 SUPERFAMILY SSF53335 41 196 3.14E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_22300 1dd3a015f3d13f890986aad662a3755c 1431 Gene3D G3DSA:1.20.58.2200 1371 1428 2.1E-12 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily K04M3_22300 1dd3a015f3d13f890986aad662a3755c 1431 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1386 1427 1.4E-13 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal K04M3_22300 1dd3a015f3d13f890986aad662a3755c 1431 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 2.1E-25 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 Gene3D G3DSA:1.10.10.10 1 68 3.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 SUPERFAMILY SSF53850 73 275 6.7E-26 T 12-10-2018 K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 SUPERFAMILY SSF46785 1 66 7.42E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 12 22 2.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 1 12 2.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 44 9.0E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 Pfam PF03466 LysR substrate binding domain 72 274 1.8E-23 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 Gene3D G3DSA:3.40.190.10 81 270 1.1E-34 T 12-10-2018 K04M3_34660 5ee2aacc166bba6056de7dde8cc82e65 276 Gene3D G3DSA:3.40.190.10 142 243 1.1E-34 T 12-10-2018 K04M3_22420 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 9.1E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 K04M3_22420 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 Gene3D G3DSA:3.40.50.1240 1 154 1.0E-35 T 12-10-2018 IPR029033 Histidine phosphatase superfamily K04M3_22420 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 SMART SM00855 2 116 6.1E-7 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 K04M3_22420 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 SUPERFAMILY SSF53254 1 143 1.23E-21 T 12-10-2018 IPR029033 Histidine phosphatase superfamily K04M3_22420 7a19ba15a6ce9b1ea2c056bdc2a52c91 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 7.4E-37 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 K04M3_28470 1d790c489c83dc5c4ed889c4a3e0f6d5 373 SUPERFAMILY SSF53383 9 371 9.71E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_28470 1d790c489c83dc5c4ed889c4a3e0f6d5 373 Pfam PF00266 Aminotransferase class-V 13 341 2.2E-39 T 12-10-2018 IPR000192 Aminotransferase class V domain K04M3_28470 1d790c489c83dc5c4ed889c4a3e0f6d5 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site K04M3_28470 1d790c489c83dc5c4ed889c4a3e0f6d5 373 Gene3D G3DSA:3.90.1150.10 9 371 1.5E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_28470 1d790c489c83dc5c4ed889c4a3e0f6d5 373 PIRSF PIRSF000524 5 373 4.8E-112 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 K04M3_28470 1d790c489c83dc5c4ed889c4a3e0f6d5 373 Gene3D G3DSA:3.40.640.10 22 269 1.5E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_36430 73dbc7d66ec968925e03533896fda5e4 76 Pfam PF09016 Pas factor saposin fold 1 76 1.4E-45 T 12-10-2018 IPR015106 Pas factor saposin domain K04M3_36430 73dbc7d66ec968925e03533896fda5e4 76 Gene3D G3DSA:1.20.1280.100 1 73 4.9E-40 T 12-10-2018 K04M3_36840 d4e160beb439fb7de1c1a04a56e22af4 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 5.7E-35 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein K04M3_36840 d4e160beb439fb7de1c1a04a56e22af4 177 Gene3D G3DSA:3.90.280.10 10 177 5.6E-51 T 12-10-2018 IPR036610 PEBP-like superfamily K04M3_36840 d4e160beb439fb7de1c1a04a56e22af4 177 SUPERFAMILY SSF49777 22 177 5.76E-48 T 12-10-2018 IPR036610 PEBP-like superfamily K04M3_36840 d4e160beb439fb7de1c1a04a56e22af4 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 174 7.8E-38 T 12-10-2018 IPR005247 YbhB/YbcL K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 Gene3D G3DSA:3.20.20.370 26 332 5.8E-105 T 12-10-2018 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 SMART SM00495 381 427 2.9 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 SMART SM00495 332 378 0.032 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 Gene3D G3DSA:2.10.10.90 333 427 2.0E-34 T 12-10-2018 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 SUPERFAMILY SSF51055 334 377 3.14E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 SUPERFAMILY SSF88713 26 337 4.7E-26 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 SUPERFAMILY SSF51055 383 426 2.49E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 K04M3_27690 e07abe187a3b7e5da9a614841cef57b9 427 Pfam PF01522 Polysaccharide deacetylase 23 126 2.0E-12 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 K04M3_01020 f2d4d8e3814f09134c071a690d3d5735 334 SUPERFAMILY SSF51556 3 326 1.02E-73 T 12-10-2018 IPR032466 Metal-dependent hydrolase K04M3_01020 f2d4d8e3814f09134c071a690d3d5735 334 Gene3D G3DSA:3.20.20.140 1 334 1.9E-97 T 12-10-2018 K04M3_01020 f2d4d8e3814f09134c071a690d3d5735 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 6.6E-90 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 K04M3_01020 f2d4d8e3814f09134c071a690d3d5735 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.529 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 K04M3_01020 f2d4d8e3814f09134c071a690d3d5735 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 6.3E-121 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 K04M3_48560 b71f4cf7de07b08b1cb91e1bf764803b 222 SUPERFAMILY SSF48613 3 216 6.12E-68 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 K04M3_48560 b71f4cf7de07b08b1cb91e1bf764803b 222 Pfam PF03070 TENA/THI-4/PQQC family 9 217 4.7E-45 T 12-10-2018 IPR004305 Thiaminase-2/PQQC K04M3_48560 b71f4cf7de07b08b1cb91e1bf764803b 222 Gene3D G3DSA:1.20.910.10 2 221 1.8E-63 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 K04M3_48560 b71f4cf7de07b08b1cb91e1bf764803b 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 5.5E-41 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 K04M3_16820 3549cf18f0e551e366e2ffb19a2c6548 300 SUPERFAMILY SSF82282 2 297 6.41E-72 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 K04M3_16820 3549cf18f0e551e366e2ffb19a2c6548 300 Gene3D G3DSA:3.20.20.330 1 299 1.7E-61 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 K04M3_16820 3549cf18f0e551e366e2ffb19a2c6548 300 Pfam PF02574 Homocysteine S-methyltransferase 6 291 2.6E-51 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 K04M3_16820 3549cf18f0e551e366e2ffb19a2c6548 300 PIRSF PIRSF037505 2 297 1.5E-9 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 K04M3_47850 38d29cf845a56f7cca8ae9d0010a9caa 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 4.3E-47 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 K04M3_04300 2338a71551779da99779d2f967209152 355 SUPERFAMILY SSF53756 5 352 1.51E-125 T 12-10-2018 K04M3_04300 2338a71551779da99779d2f967209152 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.671 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04300 2338a71551779da99779d2f967209152 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 6.8E-34 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 K04M3_04300 2338a71551779da99779d2f967209152 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.7E-117 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04300 2338a71551779da99779d2f967209152 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 4.7E-47 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04300 2338a71551779da99779d2f967209152 355 Gene3D G3DSA:3.40.50.2000 8 160 8.7E-122 T 12-10-2018 K04M3_04300 2338a71551779da99779d2f967209152 355 Gene3D G3DSA:3.40.50.2000 161 318 8.7E-122 T 12-10-2018 K04M3_16190 e7bd3e4e86933b16a15382e0d1e7e8ff 393 SMART SM00897 27 222 3.1E-32 T 12-10-2018 IPR013702 FIST domain, N-terminal K04M3_16190 e7bd3e4e86933b16a15382e0d1e7e8ff 393 Pfam PF08495 FIST N domain 32 221 1.5E-22 T 12-10-2018 IPR013702 FIST domain, N-terminal K04M3_16190 e7bd3e4e86933b16a15382e0d1e7e8ff 393 SMART SM01204 223 370 1.8E-28 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 K04M3_16190 e7bd3e4e86933b16a15382e0d1e7e8ff 393 Pfam PF10442 FIST C domain 223 369 1.6E-19 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.9E-34 T 12-10-2018 IPR001107 Band 7 domain K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 77 98 3.0E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 156 174 3.0E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 112 129 3.0E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 132 155 3.0E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 PRINTS PR00721 Stomatin signature 175 196 3.0E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 Pfam PF16200 C-terminal region of band_7 242 303 3.9E-7 T 12-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 SUPERFAMILY SSF117892 53 187 8.5E-41 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 Gene3D G3DSA:3.30.479.30 50 182 2.7E-42 T 12-10-2018 K04M3_07940 81377fbaa0404c7b54740ad25f253b50 305 SMART SM00244 22 180 1.3E-58 T 12-10-2018 IPR001107 Band 7 domain K04M3_36950 c87f2bc8ac1563c5973dddf9264c97ab 322 PRINTS PR00069 Aldo-keto reductase signature 149 166 6.8E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_36950 c87f2bc8ac1563c5973dddf9264c97ab 322 PRINTS PR00069 Aldo-keto reductase signature 118 136 6.8E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_36950 c87f2bc8ac1563c5973dddf9264c97ab 322 PRINTS PR00069 Aldo-keto reductase signature 249 273 6.8E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 K04M3_36950 c87f2bc8ac1563c5973dddf9264c97ab 322 SUPERFAMILY SSF51430 8 314 1.57E-68 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_36950 c87f2bc8ac1563c5973dddf9264c97ab 322 Pfam PF00248 Aldo/keto reductase family 18 309 2.5E-55 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain K04M3_36950 c87f2bc8ac1563c5973dddf9264c97ab 322 Gene3D G3DSA:3.20.20.100 5 322 1.4E-85 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 3.3E-111 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 6.2E-80 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 12-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 Gene3D G3DSA:1.20.1740.10 3 400 2.1E-11 T 12-10-2018 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PIRSF PIRSF006060 301 400 6.3 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 PIRSF PIRSF006060 3 292 2.4E-11 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_15050 e0286b8e159eaa394a706649fe5542db 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 1.4E-112 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_17500 264fde119c1f00fa55b2230416c69848 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 4.5E-25 T 12-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 K04M3_17500 264fde119c1f00fa55b2230416c69848 82 SUPERFAMILY SSF140129 2 78 5.89E-24 T 12-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 K04M3_17500 264fde119c1f00fa55b2230416c69848 82 Gene3D G3DSA:1.20.58.90 1 82 5.4E-13 T 12-10-2018 K04M3_17500 264fde119c1f00fa55b2230416c69848 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 1.2E-20 T 12-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 K04M3_26330 40fa1e878eb997f174cfb9dce308fbac 64 Gene3D G3DSA:3.30.50.10 1 64 8.9E-25 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 K04M3_26330 40fa1e878eb997f174cfb9dce308fbac 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.263 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 K04M3_26330 40fa1e878eb997f174cfb9dce308fbac 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 4.1E-24 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 K04M3_26330 40fa1e878eb997f174cfb9dce308fbac 64 SUPERFAMILY SSF57716 2 62 3.42E-21 T 12-10-2018 K04M3_22080 7c4b21c03ed49f4391e2385de37cd73c 99 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.4E-24 T 12-10-2018 IPR027373 Ribbon-helix-helix domain K04M3_22080 7c4b21c03ed49f4391e2385de37cd73c 99 Gene3D G3DSA:1.10.3990.20 8 99 8.2E-33 T 12-10-2018 IPR038268 Ribbon-helix-helix domain superfamily K04M3_25520 06fc89faf9c4efff36e3d0af72d4749c 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 4.2E-19 T 12-10-2018 IPR003033 SCP2 sterol-binding domain K04M3_25520 06fc89faf9c4efff36e3d0af72d4749c 175 PIRSF PIRSF025550 1 174 1.1E-86 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT K04M3_25520 06fc89faf9c4efff36e3d0af72d4749c 175 SUPERFAMILY SSF55718 44 139 1.39E-20 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily K04M3_25520 06fc89faf9c4efff36e3d0af72d4749c 175 Gene3D G3DSA:3.30.1050.10 17 139 3.8E-7 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily K04M3_16250 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_16250 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_16250 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 2 172 8.8E-66 T 12-10-2018 K04M3_16250 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_16250 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 K04M3_33530 18d14c90f7cadd28a642563c48e41209 456 Pfam PF03315 Serine dehydratase beta chain 3 153 6.5E-52 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 K04M3_33530 18d14c90f7cadd28a642563c48e41209 456 SUPERFAMILY SSF143548 16 155 7.06E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 K04M3_33530 18d14c90f7cadd28a642563c48e41209 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 9.0E-196 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 K04M3_33530 18d14c90f7cadd28a642563c48e41209 456 Gene3D G3DSA:3.30.1330.90 10 157 8.2E-50 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 K04M3_33530 18d14c90f7cadd28a642563c48e41209 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 8.7E-95 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 Gene3D G3DSA:3.20.20.300 50 438 1.5E-121 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 PRINTS PR00133 Glycosyl hydrolase family 3 signature 132 148 3.5E-19 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 PRINTS PR00133 Glycosyl hydrolase family 3 signature 241 257 3.5E-19 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 PRINTS PR00133 Glycosyl hydrolase family 3 signature 335 353 3.5E-19 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 3.5E-19 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 PRINTS PR00133 Glycosyl hydrolase family 3 signature 156 175 3.5E-19 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 SUPERFAMILY SSF51445 48 454 1.68E-100 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 65 414 2.6E-71 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 SUPERFAMILY SSF49785 747 922 1.36E-5 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 455 695 2.5E-34 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 SUPERFAMILY SSF52279 455 696 7.72E-41 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 K04M3_19030 8a7d8e839f7e60d1518921d859635b97 1114 Gene3D G3DSA:3.40.50.1700 441 697 3.0E-58 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 K04M3_31840 51c5630fbe380d27b9af14376db0d02b 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 3.1E-4 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_31840 51c5630fbe380d27b9af14376db0d02b 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.0E-5 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_31840 51c5630fbe380d27b9af14376db0d02b 182 Gene3D G3DSA:2.160.10.10 1 182 7.4E-56 T 12-10-2018 K04M3_31840 51c5630fbe380d27b9af14376db0d02b 182 SUPERFAMILY SSF51161 4 175 1.39E-44 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 SUPERFAMILY SSF158544 215 282 6.28E-20 T 12-10-2018 IPR038072 GspK, central domain superfamily K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 SUPERFAMILY SSF158544 101 213 3.92E-32 T 12-10-2018 IPR038072 GspK, central domain superfamily K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 Gene3D G3DSA:1.10.40.60 216 285 4.5E-91 T 12-10-2018 IPR038072 GspK, central domain superfamily K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 Gene3D G3DSA:1.10.40.60 99 215 4.5E-91 T 12-10-2018 IPR038072 GspK, central domain superfamily K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 3.3E-88 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 SUPERFAMILY SSF54523 36 325 5.02E-36 T 12-10-2018 K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 Gene3D G3DSA:3.30.1300.30 42 309 4.5E-91 T 12-10-2018 K04M3_01260 9d82a79c3920addc0c71d7d5b0c61df5 336 PIRSF PIRSF002786 1 328 8.4E-68 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 K04M3_01920 abefe863b3819a892da48453ec9975ea 240 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 176 2.7E-35 T 12-10-2018 IPR002654 Glycosyl transferase, family 25 K04M3_10980 d4b8c232cf2b02943ae300e9e933c8e9 268 Pfam PF07103 Protein of unknown function (DUF1365) 5 241 4.0E-69 T 12-10-2018 IPR010775 Protein of unknown function DUF1365 K04M3_40250 87c33df9e43905e180570b180441b029 464 PIRSF PIRSF002808 9 461 2.5E-108 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 K04M3_40250 87c33df9e43905e180570b180441b029 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 K04M3_40250 87c33df9e43905e180570b180441b029 464 Gene3D G3DSA:1.20.1250.20 246 459 2.1E-37 T 12-10-2018 K04M3_40250 87c33df9e43905e180570b180441b029 464 Gene3D G3DSA:1.20.1250.20 28 230 9.4E-34 T 12-10-2018 K04M3_40250 87c33df9e43905e180570b180441b029 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 3.9E-139 T 12-10-2018 K04M3_40250 87c33df9e43905e180570b180441b029 464 SUPERFAMILY SSF103473 17 445 8.89E-59 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_40250 87c33df9e43905e180570b180441b029 464 Pfam PF07690 Major Facilitator Superfamily 35 396 6.2E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_32350 a58bf5f2200f17be947b49939a5b4848 144 Pfam PF00258 Flavodoxin 4 136 3.1E-21 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 K04M3_32350 a58bf5f2200f17be947b49939a5b4848 144 Gene3D G3DSA:3.40.50.360 1 144 5.3E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_32350 a58bf5f2200f17be947b49939a5b4848 144 SUPERFAMILY SSF52218 2 142 3.35E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_12490 cd84b08ba5ab5c19a5c7004c62fa29bd 293 Pfam PF03547 Membrane transport protein 152 284 7.1E-7 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 1.9E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 SUPERFAMILY SSF46767 75 156 2.49E-33 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 Gene3D G3DSA:1.10.10.10 75 158 7.2E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 SUPERFAMILY SSF53155 4 80 3.14E-19 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 1.2E-38 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 Gene3D G3DSA:3.30.160.70 3 71 7.2E-19 T 12-10-2018 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 72 2.1E-8 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.736 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 K04M3_49230 f65d1a9f74ecb9001eef3668ee89bc03 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 K04M3_25440 364b3aae2ae4b0d8effea1b16b815f5a 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 3.9E-154 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 K04M3_25440 364b3aae2ae4b0d8effea1b16b815f5a 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_25440 364b3aae2ae4b0d8effea1b16b815f5a 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.5E-27 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 K04M3_25440 364b3aae2ae4b0d8effea1b16b815f5a 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 9.0E-74 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 K04M3_04190 755a7c777c655f71ac8437f33d504c50 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 5.4E-35 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 K04M3_04190 755a7c777c655f71ac8437f33d504c50 122 SUPERFAMILY SSF52980 7 112 7.37E-22 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 K04M3_04190 755a7c777c655f71ac8437f33d504c50 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 3.5E-28 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 K04M3_04190 755a7c777c655f71ac8437f33d504c50 122 Gene3D G3DSA:3.40.1350.10 13 122 4.9E-32 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 K04M3_04190 755a7c777c655f71ac8437f33d504c50 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.901 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Pfam PF00202 Aminotransferase class-III 51 464 2.8E-94 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 2.3E-160 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Gene3D G3DSA:3.90.1150.10 38 461 5.1E-132 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Gene3D G3DSA:3.90.1150.10 561 948 6.8E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 SUPERFAMILY SSF53383 506 957 9.26E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Gene3D G3DSA:3.40.640.10 87 355 5.1E-132 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Gene3D G3DSA:1.20.1650.10 463 560 1.4E-44 T 12-10-2018 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 529 892 5.3E-61 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 SUPERFAMILY SSF53383 42 464 6.34E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_20010 ae5ec66fe51a434b6aacb86a78e9624b 958 Gene3D G3DSA:3.40.640.10 575 843 6.8E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_35980 503fb898bc8f2d600cc1fde1529853cd 305 SUPERFAMILY SSF53187 36 288 9.59E-40 T 12-10-2018 K04M3_35980 503fb898bc8f2d600cc1fde1529853cd 305 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 79 177 4.6E-8 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_35980 503fb898bc8f2d600cc1fde1529853cd 305 Gene3D G3DSA:3.40.630.10 5 305 3.9E-118 T 12-10-2018 K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 SUPERFAMILY SSF51735 9 242 2.68E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0058 T 12-10-2018 K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 Gene3D G3DSA:3.40.50.720 1 246 2.5E-72 T 12-10-2018 K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 Pfam PF00106 short chain dehydrogenase 13 208 1.7E-54 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_20880 8c923ae584f7c396a7df4f233b0beb91 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_04860 ffe371d16f1427f3cf789ae2e5d27bd2 344 Gene3D G3DSA:3.20.20.100 1 344 4.6E-136 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_04860 ffe371d16f1427f3cf789ae2e5d27bd2 344 SUPERFAMILY SSF51430 1 344 9.69E-110 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_04860 ffe371d16f1427f3cf789ae2e5d27bd2 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.3E-75 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain K04M3_35310 aa48b1ea498853260350b4c04b036794 273 SUPERFAMILY SSF53850 16 273 8.43E-72 T 12-10-2018 K04M3_35310 aa48b1ea498853260350b4c04b036794 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 1.2E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 K04M3_35310 aa48b1ea498853260350b4c04b036794 273 Gene3D G3DSA:3.40.190.10 99 233 3.0E-81 T 12-10-2018 K04M3_35310 aa48b1ea498853260350b4c04b036794 273 Gene3D G3DSA:3.40.190.10 30 270 3.0E-81 T 12-10-2018 K04M3_35310 aa48b1ea498853260350b4c04b036794 273 Pfam PF12849 PBP superfamily domain 23 259 1.5E-39 T 12-10-2018 IPR024370 PBP domain K04M3_16290 89e0ccdc9f6cdb81dcc35bdf60585992 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 71 4.0E-19 T 12-10-2018 IPR008554 Glutaredoxin-like K04M3_16290 89e0ccdc9f6cdb81dcc35bdf60585992 80 SUPERFAMILY SSF52833 1 73 3.01E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_16290 89e0ccdc9f6cdb81dcc35bdf60585992 80 Gene3D G3DSA:3.40.30.10 1 80 6.6E-20 T 12-10-2018 K04M3_10910 aba74487de685685e8fc55a96897f90c 273 Gene3D G3DSA:3.40.50.150 13 270 1.8E-42 T 12-10-2018 K04M3_10910 aba74487de685685e8fc55a96897f90c 273 SUPERFAMILY SSF53335 25 205 3.19E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_10910 aba74487de685685e8fc55a96897f90c 273 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 19 273 32.039 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 K04M3_10910 aba74487de685685e8fc55a96897f90c 273 Pfam PF08241 Methyltransferase domain 63 155 2.1E-26 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 K04M3_10910 aba74487de685685e8fc55a96897f90c 273 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 27 271 9.9E-69 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 K04M3_12230 84326783e12605cb0368c7141153a472 222 Pfam PF13488 Glycine zipper 38 86 1.5E-10 T 12-10-2018 IPR039567 Glycine zipper domain K04M3_12230 84326783e12605cb0368c7141153a472 222 SUPERFAMILY SSF103088 106 221 1.83E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_12230 84326783e12605cb0368c7141153a472 222 Pfam PF00691 OmpA family 118 212 4.4E-23 T 12-10-2018 IPR006665 OmpA-like domain K04M3_12230 84326783e12605cb0368c7141153a472 222 Gene3D G3DSA:3.30.1330.60 80 222 1.3E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_12230 84326783e12605cb0368c7141153a472 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 6.0E-7 T 12-10-2018 K04M3_12230 84326783e12605cb0368c7141153a472 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 6.0E-7 T 12-10-2018 K04M3_12230 84326783e12605cb0368c7141153a472 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 6.0E-7 T 12-10-2018 K04M3_12230 84326783e12605cb0368c7141153a472 222 PRINTS PR01021 OMPA domain signature 118 140 1.6E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_12230 84326783e12605cb0368c7141153a472 222 PRINTS PR01021 OMPA domain signature 148 163 1.6E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_12230 84326783e12605cb0368c7141153a472 222 PRINTS PR01021 OMPA domain signature 163 179 1.6E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 SUPERFAMILY SSF52540 269 480 1.04E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43460 663cce950c3250315d84c7a962addd2e 501 Pfam PF00005 ABC transporter 270 423 1.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 SUPERFAMILY SSF52540 5 230 2.44E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43460 663cce950c3250315d84c7a962addd2e 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 Gene3D G3DSA:3.40.50.300 266 497 4.4E-47 T 12-10-2018 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 Pfam PF00005 ABC transporter 21 170 4.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 Gene3D G3DSA:3.40.50.300 1 239 3.5E-57 T 12-10-2018 K04M3_43460 663cce950c3250315d84c7a962addd2e 501 SMART SM00382 278 472 6.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_43460 663cce950c3250315d84c7a962addd2e 501 SMART SM00382 30 219 7.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_45730 2ebe59dc3490976789362fd46daa1fd2 118 Gene3D G3DSA:1.10.3830.10 3 118 8.9E-41 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 K04M3_45730 2ebe59dc3490976789362fd46daa1fd2 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 115 3.8E-36 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 K04M3_45730 2ebe59dc3490976789362fd46daa1fd2 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 K04M3_31300 570ed5d612acac4962363a464f5b22d8 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.4E-255 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 K04M3_31300 570ed5d612acac4962363a464f5b22d8 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 1.2E-76 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 K04M3_31300 570ed5d612acac4962363a464f5b22d8 842 PIRSF PIRSF001444 1 842 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 K04M3_24040 1cd1fb9e12c686a53c9030f74ec75cbf 256 Pfam PF00849 RNA pseudouridylate synthase 24 183 2.4E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_24040 1cd1fb9e12c686a53c9030f74ec75cbf 256 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_24040 1cd1fb9e12c686a53c9030f74ec75cbf 256 Gene3D G3DSA:3.30.2350.10 6 237 1.7E-61 T 12-10-2018 K04M3_24040 1cd1fb9e12c686a53c9030f74ec75cbf 256 SUPERFAMILY SSF55120 11 252 1.42E-64 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 SMART SM00347 33 134 6.1E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 SUPERFAMILY SSF46785 7 145 1.08E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 Gene3D G3DSA:1.10.10.10 2 146 1.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_10680 9a16d12da9382bb9b52f137f0ad41f88 151 Pfam PF01047 MarR family 46 97 7.1E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 Pfam PF13522 Glutamine amidotransferase domain 63 206 2.2E-17 T 12-10-2018 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 Gene3D G3DSA:3.60.20.10 2 411 1.6E-158 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 45.156 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 Gene3D G3DSA:3.40.50.2020 276 440 1.6E-158 T 12-10-2018 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 PIRSF PIRSF000485 1 479 1.3E-170 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 SUPERFAMILY SSF53271 249 482 1.97E-70 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 3.6E-167 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 1.3E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 K04M3_22240 e709731804b4ce9a0d9aeb00d5dcc247 504 SUPERFAMILY SSF56235 2 256 3.09E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_00840 f76785a32a59ef1fda009741608c0d6d 510 Pfam PF02646 RmuC family 181 477 6.7E-107 T 12-10-2018 IPR003798 DNA recombination RmuC K04M3_48550 60ae0eb18707449a31ad0c8a516000fe 316 SUPERFAMILY SSF53850 29 311 7.5E-50 T 12-10-2018 K04M3_48550 60ae0eb18707449a31ad0c8a516000fe 316 Gene3D G3DSA:3.40.190.10 28 303 8.3E-73 T 12-10-2018 K04M3_48550 60ae0eb18707449a31ad0c8a516000fe 316 Gene3D G3DSA:3.40.190.10 109 209 8.3E-73 T 12-10-2018 K04M3_48550 60ae0eb18707449a31ad0c8a516000fe 316 Pfam PF09084 NMT1/THI5 like 37 248 3.0E-71 T 12-10-2018 IPR015168 SsuA/THI5-like K04M3_13450 7174c8b1fb47ae4abdb5122cf61834f2 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 1.6E-39 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 K04M3_13450 7174c8b1fb47ae4abdb5122cf61834f2 345 Gene3D G3DSA:3.90.850.10 1 345 1.3E-134 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 K04M3_13450 7174c8b1fb47ae4abdb5122cf61834f2 345 SUPERFAMILY SSF56529 83 339 3.92E-56 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 K04M3_41480 ab7e1e107bf37b4d18c285e53300cbe5 104 Pfam PF10734 Protein of unknown function (DUF2523) 15 95 7.6E-7 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 K04M3_41100 ab7e1e107bf37b4d18c285e53300cbe5 104 Pfam PF10734 Protein of unknown function (DUF2523) 15 95 7.6E-7 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 K04M3_40970 ab7e1e107bf37b4d18c285e53300cbe5 104 Pfam PF10734 Protein of unknown function (DUF2523) 15 95 7.6E-7 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 K04M3_09300 c105ee9786666505881b11c6cdab21e7 309 Pfam PF03601 Conserved hypothetical protein 698 19 291 5.4E-54 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 K04M3_28400 52fbe40ea4777ab3e7555470ebed1c75 179 Gene3D G3DSA:2.40.50.140 2 148 5.6E-50 T 12-10-2018 K04M3_28400 52fbe40ea4777ab3e7555470ebed1c75 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.739 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 K04M3_28400 52fbe40ea4777ab3e7555470ebed1c75 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 1.4E-63 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 K04M3_28400 52fbe40ea4777ab3e7555470ebed1c75 179 PIRSF PIRSF002070 2 176 3.7E-37 T 12-10-2018 K04M3_28400 52fbe40ea4777ab3e7555470ebed1c75 179 Pfam PF00436 Single-strand binding protein family 6 106 1.4E-43 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 K04M3_28400 52fbe40ea4777ab3e7555470ebed1c75 179 SUPERFAMILY SSF50249 4 179 1.27E-64 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_48620 8ed8ccf42dea5992af40e848fe062cbc 171 SUPERFAMILY SSF55729 2 170 1.83E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_48620 8ed8ccf42dea5992af40e848fe062cbc 171 Pfam PF13302 Acetyltransferase (GNAT) domain 10 146 2.8E-21 T 12-10-2018 IPR000182 GNAT domain K04M3_48620 8ed8ccf42dea5992af40e848fe062cbc 171 Gene3D G3DSA:3.40.630.30 1 169 2.7E-32 T 12-10-2018 K04M3_05590 86b8f01e44e5d750380e74724a864d7b 149 SUPERFAMILY SSF54631 1 132 8.46E-32 T 12-10-2018 K04M3_05590 86b8f01e44e5d750380e74724a864d7b 149 Gene3D G3DSA:3.10.580.10 1 149 2.3E-50 T 12-10-2018 K04M3_05590 86b8f01e44e5d750380e74724a864d7b 149 Pfam PF00571 CBS domain 4 58 1.0E-12 T 12-10-2018 IPR000644 CBS domain K04M3_05590 86b8f01e44e5d750380e74724a864d7b 149 Pfam PF00571 CBS domain 79 127 2.5E-8 T 12-10-2018 IPR000644 CBS domain K04M3_05590 86b8f01e44e5d750380e74724a864d7b 149 SMART SM00116 11 59 2.2E-9 T 12-10-2018 IPR000644 CBS domain K04M3_05590 86b8f01e44e5d750380e74724a864d7b 149 SMART SM00116 84 131 1.2E-4 T 12-10-2018 IPR000644 CBS domain K04M3_06160 40e94d84b8af988c854c3c1258b80106 203 Pfam PF09335 SNARE associated Golgi protein 37 157 7.1E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein K04M3_15740 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 12-10-2018 IPR021343 Protein of unknown function DUF2960 K04M3_28980 c047366b331b50ff488329759caa3117 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 7.6E-63 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28980 c047366b331b50ff488329759caa3117 263 Pfam PF00696 Amino acid kinase family 9 238 3.0E-35 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_28980 c047366b331b50ff488329759caa3117 263 Gene3D G3DSA:3.40.1160.10 4 260 5.8E-64 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_28980 c047366b331b50ff488329759caa3117 263 SUPERFAMILY SSF53633 9 261 7.07E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_28980 c047366b331b50ff488329759caa3117 263 PIRSF PIRSF000728 1 263 2.1E-69 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_28980 c047366b331b50ff488329759caa3117 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.292 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 K04M3_12930 dfecc6e7b6eb1fe7772549c8811a554b 165 Gene3D G3DSA:2.30.110.60 1 153 4.0E-56 T 12-10-2018 K04M3_12930 dfecc6e7b6eb1fe7772549c8811a554b 165 Pfam PF16461 Lambda phage tail tube protein, TTP 3 153 2.4E-45 T 12-10-2018 IPR032494 Lambda phage tail tube protein K04M3_28660 bcefc51df338b3f0fc4b32979f47d54a 239 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 26 239 2.4E-53 T 12-10-2018 IPR026387 Outer membrane protein K04M3_28660 bcefc51df338b3f0fc4b32979f47d54a 239 Pfam PF13505 Outer membrane protein beta-barrel domain 29 239 5.3E-8 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_25480 c18960b8aec9ed851d26ffeed4ff1352 151 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 1.1E-15 T 12-10-2018 IPR000182 GNAT domain K04M3_25480 c18960b8aec9ed851d26ffeed4ff1352 151 SUPERFAMILY SSF55729 2 147 5.06E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_25480 c18960b8aec9ed851d26ffeed4ff1352 151 Gene3D G3DSA:3.40.630.30 3 149 3.0E-41 T 12-10-2018 K04M3_25480 c18960b8aec9ed851d26ffeed4ff1352 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 6.3E-39 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 K04M3_49830 1a0421056cc7310367e95a998270f783 485 Gene3D G3DSA:1.10.443.10 182 433 1.1E-15 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_49830 1a0421056cc7310367e95a998270f783 485 Pfam PF00589 Phage integrase family 216 428 3.9E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_49830 1a0421056cc7310367e95a998270f783 485 SUPERFAMILY SSF56349 213 431 1.27E-17 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_32980 1a0421056cc7310367e95a998270f783 485 Gene3D G3DSA:1.10.443.10 182 433 1.1E-15 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_32980 1a0421056cc7310367e95a998270f783 485 Pfam PF00589 Phage integrase family 216 428 3.9E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_32980 1a0421056cc7310367e95a998270f783 485 SUPERFAMILY SSF56349 213 431 1.27E-17 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 Pfam PF07687 Peptidase dimerisation domain 211 296 2.7E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 1.0E-182 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 Pfam PF01546 Peptidase family M20/M25/M40 77 482 1.8E-20 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PIRSF PIRSF016599 5 489 5.9E-216 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 Gene3D G3DSA:3.40.630.10 380 490 4.1E-23 T 12-10-2018 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 Gene3D G3DSA:3.40.630.10 1 232 1.4E-64 T 12-10-2018 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 SUPERFAMILY SSF53187 15 486 1.2E-61 T 12-10-2018 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_06490 cc576a8ba91128db4078a3d877b900be 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.0E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 K04M3_36130 48b71f9292c4a3ea7fdb0ba5cd56e133 345 Pfam PF01032 FecCD transport family 19 338 3.0E-91 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_36130 48b71f9292c4a3ea7fdb0ba5cd56e133 345 SUPERFAMILY SSF81345 5 339 2.88E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_36130 48b71f9292c4a3ea7fdb0ba5cd56e133 345 Gene3D G3DSA:1.10.3470.10 6 344 3.0E-105 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_27390 aae804bc08a5a93476672a4cc84feb3d 379 Pfam PF01464 Transglycosylase SLT domain 211 332 4.7E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 K04M3_27390 aae804bc08a5a93476672a4cc84feb3d 379 SUPERFAMILY SSF53955 206 371 4.79E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_27390 aae804bc08a5a93476672a4cc84feb3d 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 K04M3_27390 aae804bc08a5a93476672a4cc84feb3d 379 Gene3D G3DSA:1.10.530.10 190 371 3.4E-49 T 12-10-2018 K04M3_27390 aae804bc08a5a93476672a4cc84feb3d 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 8.2E-78 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal K04M3_13330 3734b76386c3bcf78278f1244fd622ed 282 Gene3D G3DSA:1.10.3720.10 13 278 5.3E-51 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_13330 3734b76386c3bcf78278f1244fd622ed 282 SUPERFAMILY SSF161098 12 279 1.31E-55 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_13330 3734b76386c3bcf78278f1244fd622ed 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 265 2.7E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_44810 06893acdb2cca89b734d9097f538e528 315 Pfam PF03595 Voltage-dependent anion channel 6 298 6.3E-25 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 K04M3_44810 06893acdb2cca89b734d9097f538e528 315 Gene3D G3DSA:1.50.10.150 2 304 1.1E-30 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 12-10-2018 K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 Gene3D G3DSA:1.10.1060.10 105 236 9.7E-56 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 SUPERFAMILY SSF46548 105 233 4.01E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 SUPERFAMILY SSF54292 1 104 3.18E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 Gene3D G3DSA:3.10.20.30 1 104 5.0E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily K04M3_08410 c93c5d1efeff1d9241e96dd220896354 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 9.4E-30 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_25770 f011e44ea15b88e21af2a4c27c588fd3 281 Pfam PF01769 Divalent cation transporter 142 271 6.6E-27 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 K04M3_25770 f011e44ea15b88e21af2a4c27c588fd3 281 Gene3D G3DSA:1.10.357.20 94 278 1.2E-52 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain K04M3_25770 f011e44ea15b88e21af2a4c27c588fd3 281 SUPERFAMILY SSF161093 99 278 3.4E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 SUPERFAMILY SSF52172 3 184 3.02E-43 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.2E-113 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 Gene3D G3DSA:1.10.10.10 127 228 4.9E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 SMART SM00448 3 116 1.9E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 12-10-2018 K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 SMART SM00862 150 225 1.8E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_05440 3e842ac2c5f29c5132ba6842deeeb55a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.7E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_42210 e9c3bd225dbb7550496efe8b3d2ec25a 272 Pfam PF00563 EAL domain 27 255 1.5E-41 T 12-10-2018 IPR001633 EAL domain K04M3_42210 e9c3bd225dbb7550496efe8b3d2ec25a 272 SUPERFAMILY SSF141868 25 263 7.06E-49 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_42210 e9c3bd225dbb7550496efe8b3d2ec25a 272 Gene3D G3DSA:3.20.20.450 22 271 4.7E-46 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_42210 e9c3bd225dbb7550496efe8b3d2ec25a 272 SMART SM00052 13 260 2.2E-12 T 12-10-2018 IPR001633 EAL domain K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.7E-134 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 SUPERFAMILY SSF53383 9 383 9.39E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 Gene3D G3DSA:3.40.640.10 3 248 2.3E-81 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 1.7E-199 T 12-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 Gene3D G3DSA:3.90.1150.10 249 386 2.0E-50 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_29050 956a4fe8d32dd81062146a998ae9af0b 386 PIRSF PIRSF001434 1 385 1.8E-129 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 K04M3_11140 89fc2bc49972f0493d58d209e5ccbac6 204 SUPERFAMILY SSF52317 5 203 1.04E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_11140 89fc2bc49972f0493d58d209e5ccbac6 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 1.1E-17 T 12-10-2018 IPR017926 Glutamine amidotransferase K04M3_11140 89fc2bc49972f0493d58d209e5ccbac6 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.538 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 K04M3_11140 89fc2bc49972f0493d58d209e5ccbac6 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 1.5E-68 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 K04M3_11140 89fc2bc49972f0493d58d209e5ccbac6 204 Gene3D G3DSA:3.40.50.880 2 204 3.6E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_11140 89fc2bc49972f0493d58d209e5ccbac6 204 PIRSF PIRSF000495 4 204 1.6E-64 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 K04M3_45670 daf095d0af750a396af90336823e43ee 199 Gene3D G3DSA:3.40.30.10 17 199 3.4E-49 T 12-10-2018 K04M3_45670 daf095d0af750a396af90336823e43ee 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 2.0E-18 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 K04M3_45670 daf095d0af750a396af90336823e43ee 199 SUPERFAMILY SSF52833 20 197 1.43E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_45670 daf095d0af750a396af90336823e43ee 199 PIRSF PIRSF001488 1 199 2.5E-61 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL K04M3_45670 daf095d0af750a396af90336823e43ee 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_39870 8d1dcbb13381118bc986bf72f3475a44 347 Gene3D G3DSA:1.10.150.130 81 162 3.1E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal K04M3_39870 8d1dcbb13381118bc986bf72f3475a44 347 Gene3D G3DSA:1.10.443.10 173 345 2.3E-34 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_39870 8d1dcbb13381118bc986bf72f3475a44 347 SUPERFAMILY SSF56349 79 339 1.18E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_39870 8d1dcbb13381118bc986bf72f3475a44 347 Pfam PF00589 Phage integrase family 197 333 6.7E-21 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_42420 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 SUPERFAMILY SSF69118 6 147 1.02E-35 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_42420 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 98 6.5E-13 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 K04M3_42420 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 Gene3D G3DSA:1.20.1290.10 1 149 4.3E-35 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_42420 ccfb5b7b3cf6db0ef1ef53985ae7408c 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 81 5.4E-15 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 K04M3_02380 4a6a326fefe2e229287a4e0f7e7f01fd 157 Gene3D G3DSA:3.40.140.10 35 157 4.5E-42 T 12-10-2018 K04M3_02380 4a6a326fefe2e229287a4e0f7e7f01fd 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site K04M3_02380 4a6a326fefe2e229287a4e0f7e7f01fd 157 SUPERFAMILY SSF102712 52 124 7.45E-6 T 12-10-2018 K04M3_02380 4a6a326fefe2e229287a4e0f7e7f01fd 157 Pfam PF04002 RadC-like JAB domain 39 155 1.2E-43 T 12-10-2018 IPR025657 RadC-like JAB domain K04M3_02380 4a6a326fefe2e229287a4e0f7e7f01fd 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 21 157 2.1E-44 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.3E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 6.1E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 SUPERFAMILY SSF89919 2 105 3.4E-32 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 9.0E-47 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 Gene3D G3DSA:3.30.300.20 1 106 1.3E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.709 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 K04M3_25620 35b0381e91cd2d1c1585aa008c4eae50 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 K04M3_16130 7f97893c009ae5fc6662df2bb3585471 158 Pfam PF05751 FixH 7 147 1.6E-41 T 12-10-2018 IPR008620 Nitrogen fixation protein FixH K04M3_02240 929565c615e77682f77ca736c97f36d1 256 SUPERFAMILY SSF51351 2 250 6.54E-89 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_02240 929565c615e77682f77ca736c97f36d1 256 Pfam PF00121 Triosephosphate isomerase 5 247 3.1E-87 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_02240 929565c615e77682f77ca736c97f36d1 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.321 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_02240 929565c615e77682f77ca736c97f36d1 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 4.7E-78 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_02240 929565c615e77682f77ca736c97f36d1 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 K04M3_02240 929565c615e77682f77ca736c97f36d1 256 Gene3D G3DSA:3.20.20.70 1 256 4.3E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_13970 6c8258c94c3b18e40db2c2af65b9c6b5 162 Pfam PF08818 Domain of unknown function (DU1801) 20 118 5.2E-8 T 12-10-2018 IPR014922 Domain of unknown function DUF1801 K04M3_13970 6c8258c94c3b18e40db2c2af65b9c6b5 162 SUPERFAMILY SSF159888 7 125 1.31E-8 T 12-10-2018 K04M3_11240 0e67c1533572087fd661ef102e52fef8 212 Pfam PF02698 DUF218 domain 33 145 1.8E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 K04M3_11240 0e67c1533572087fd661ef102e52fef8 212 Gene3D G3DSA:3.40.50.620 15 151 1.4E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_25460 0c832f7e5f4bf185dc3e24bee644cfbd 65 Pfam PF17320 Family of unknown function (DUF5363) 1 44 6.9E-11 T 12-10-2018 IPR035292 Protein of unknown function DUF5363 K04M3_00890 75b93de34bd02038277ce73a2acaee9b 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 123 18.273 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 K04M3_00890 75b93de34bd02038277ce73a2acaee9b 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.7E-32 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 K04M3_00890 75b93de34bd02038277ce73a2acaee9b 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.4E-27 T 12-10-2018 K04M3_00890 75b93de34bd02038277ce73a2acaee9b 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.4E-27 T 12-10-2018 K04M3_00890 75b93de34bd02038277ce73a2acaee9b 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.4E-27 T 12-10-2018 K04M3_00890 75b93de34bd02038277ce73a2acaee9b 132 Pfam PF02416 mttA/Hcf106 family 4 48 3.2E-5 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 K04M3_47790 323a2d1a2913508fbdcbf48ab291c8d9 518 Pfam PF06114 IrrE N-terminal-like domain 194 326 1.3E-5 T 12-10-2018 IPR010359 IrrE N-terminal-like domain K04M3_47790 323a2d1a2913508fbdcbf48ab291c8d9 518 Gene3D G3DSA:1.10.260.40 11 93 7.9E-14 T 12-10-2018 K04M3_47790 323a2d1a2913508fbdcbf48ab291c8d9 518 SUPERFAMILY SSF47413 12 84 6.19E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_47790 323a2d1a2913508fbdcbf48ab291c8d9 518 SMART SM00530 17 79 9.8E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_47790 323a2d1a2913508fbdcbf48ab291c8d9 518 Pfam PF01381 Helix-turn-helix 18 79 1.7E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_47790 323a2d1a2913508fbdcbf48ab291c8d9 518 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 4.9E-106 T 12-10-2018 IPR022055 Protein of unknown function DUF3612 K04M3_48110 84cb9ade767288bdb651a046feb4158c 253 Gene3D G3DSA:3.60.15.10 2 238 1.6E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_48110 84cb9ade767288bdb651a046feb4158c 253 Pfam PF00753 Metallo-beta-lactamase superfamily 10 209 3.4E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_48110 84cb9ade767288bdb651a046feb4158c 253 SUPERFAMILY SSF56281 8 244 4.98E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_48110 84cb9ade767288bdb651a046feb4158c 253 SMART SM00849 10 209 2.2E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_44010 1c6e429cf8094c4c411619a481027543 400 SUPERFAMILY SSF56801 116 340 3.4E-31 T 12-10-2018 K04M3_44010 1c6e429cf8094c4c411619a481027543 400 Gene3D G3DSA:3.40.50.12780 2 316 1.1E-60 T 12-10-2018 K04M3_44010 1c6e429cf8094c4c411619a481027543 400 Pfam PF00501 AMP-binding enzyme 123 275 4.8E-13 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 Gene3D G3DSA:1.10.10.10 40 127 4.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 68 78 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 78 89 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 Gene3D G3DSA:3.40.190.290 130 330 2.4E-63 T 12-10-2018 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 SUPERFAMILY SSF46785 41 121 1.2E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 Pfam PF03466 LysR substrate binding domain 127 328 5.0E-37 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 SMART SM00347 33 127 0.0031 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 43 101 7.4E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_44240 2ebe83b150545f7faa0a05a5d1e16ec0 337 SUPERFAMILY SSF53850 127 333 4.65E-41 T 12-10-2018 K04M3_34390 ec3177685f32aef2b43da4d68f8160db 331 SUPERFAMILY SSF103088 155 275 1.57E-19 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_34390 ec3177685f32aef2b43da4d68f8160db 331 Pfam PF00691 OmpA family 171 267 5.7E-12 T 12-10-2018 IPR006665 OmpA-like domain K04M3_34390 ec3177685f32aef2b43da4d68f8160db 331 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 63 3.8E-16 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain K04M3_34390 ec3177685f32aef2b43da4d68f8160db 331 Gene3D G3DSA:3.30.1330.60 124 306 2.0E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.6E-49 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.409 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 Gene3D G3DSA:3.30.1130.10 21 138 1.2E-46 T 12-10-2018 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.4E-128 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 PIRSF PIRSF004750 6 281 9.8E-131 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 Gene3D G3DSA:3.30.1130.10 143 281 5.8E-62 T 12-10-2018 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 SUPERFAMILY SSF55620 184 267 8.15E-10 T 12-10-2018 K04M3_06780 c4e74134c7aa079751cb830aacc4979b 281 Pfam PF14489 QueF-like protein 194 270 2.5E-26 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 K04M3_39070 75b22abe015d75a2691a40ec79c8e4bb 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 2.3E-184 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath K04M3_39070 75b22abe015d75a2691a40ec79c8e4bb 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 493 1.4E-201 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath K04M3_14170 bcc6f4cdda6ba0390495755779c41543 158 SUPERFAMILY SSF53850 42 155 1.34E-6 T 12-10-2018 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 Gene3D G3DSA:3.40.50.2300 4 137 1.6E-26 T 12-10-2018 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 SMART SM00421 142 199 9.7E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 Pfam PF00072 Response regulator receiver domain 10 120 1.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 SUPERFAMILY SSF52172 2 128 5.27E-26 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 Gene3D G3DSA:1.10.10.10 138 200 3.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 SMART SM00448 7 120 6.3E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 SUPERFAMILY SSF46894 139 199 7.14E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_42900 4090f75a4e1cdb94b9fdc6704c1e6411 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 1.5E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_24690 cd02dee3ed6b8db49187cea4591a396f 256 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 249 1.8E-94 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 K04M3_24690 cd02dee3ed6b8db49187cea4591a396f 256 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 253 35.569 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 K04M3_24690 cd02dee3ed6b8db49187cea4591a396f 256 SMART SM00900 143 241 2.0E-32 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 K04M3_24690 cd02dee3ed6b8db49187cea4591a396f 256 PIRSF PIRSF009437 1 256 9.4E-103 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 K04M3_24690 cd02dee3ed6b8db49187cea4591a396f 256 Pfam PF04205 FMN-binding domain 143 238 3.7E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 Pfam PF00326 Prolyl oligopeptidase family 504 720 1.5E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 SUPERFAMILY SSF50993 39 451 4.45E-94 T 12-10-2018 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 Gene3D G3DSA:3.40.50.1820 60 713 1.4E-250 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 Gene3D G3DSA:2.130.10.120 111 445 1.4E-250 T 12-10-2018 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 6.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 6.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 6.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 6.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 6.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 6.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 1.2E-96 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 K04M3_48150 626e176042de78f94eb19fc644f6ca2d 721 SUPERFAMILY SSF53474 452 700 2.96E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_18970 3c223235a3d3239422e495e5f9c004c0 235 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 9 205 1.0E-37 T 12-10-2018 K04M3_15790 3d5050c0a77a9f72c803f40230ec2c75 272 Gene3D G3DSA:3.40.190.10 31 255 1.7E-98 T 12-10-2018 K04M3_15790 3d5050c0a77a9f72c803f40230ec2c75 272 Gene3D G3DSA:3.40.190.10 106 218 1.7E-98 T 12-10-2018 K04M3_15790 3d5050c0a77a9f72c803f40230ec2c75 272 SUPERFAMILY SSF53850 29 256 3.54E-33 T 12-10-2018 K04M3_15790 3d5050c0a77a9f72c803f40230ec2c75 272 Pfam PF12849 PBP superfamily domain 31 247 1.5E-30 T 12-10-2018 IPR024370 PBP domain K04M3_36320 18b0db40dd1daf936b412fb2a94278d6 215 SUPERFAMILY SSF53639 6 210 4.32E-61 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily K04M3_36320 18b0db40dd1daf936b412fb2a94278d6 215 Gene3D G3DSA:3.40.225.10 6 213 2.3E-60 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily K04M3_36320 18b0db40dd1daf936b412fb2a94278d6 215 SMART SM01007 13 192 4.5E-60 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal K04M3_36320 18b0db40dd1daf936b412fb2a94278d6 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 191 5.2E-48 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal K04M3_35140 95a234eebebd0076415e22d6ed4ee856 126 PIRSF PIRSF028770 1 126 3.2E-72 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 K04M3_35140 95a234eebebd0076415e22d6ed4ee856 126 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.3E-40 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 K04M3_49670 eb4447e1a685c05486501b409f804c00 369 Gene3D G3DSA:3.40.50.300 11 206 1.8E-21 T 12-10-2018 K04M3_49670 eb4447e1a685c05486501b409f804c00 369 SUPERFAMILY SSF52540 31 242 9.98E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_07870 2e8e099c3a5bda60247857105fab9f93 258 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 18 258 28.206 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 K04M3_07870 2e8e099c3a5bda60247857105fab9f93 258 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 24 240 8.6E-40 T 12-10-2018 K04M3_34750 e0b7a50fd517370bdb23c09e68e690de 227 Pfam PF06468 Spondin_N 40 157 8.8E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 K04M3_34750 e0b7a50fd517370bdb23c09e68e690de 227 Gene3D G3DSA:2.60.40.2130 28 169 1.4E-12 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 TIGRFAM TIGR01707 gspI: type II secretion system protein I 18 115 1.1E-35 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 38 4.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 Gene3D G3DSA:3.30.1300.30 42 129 1.1E-34 T 12-10-2018 K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 Pfam PF02501 Type II secretion system (T2SS), protein I 52 127 7.3E-20 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 SUPERFAMILY SSF54523 49 127 9.03E-22 T 12-10-2018 K04M3_01240 27063a5d3837f19e961c699eb16248d0 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 36 4.8E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_22120 b9e1bb48ffa5a6ffe5a3eff85bc390ea 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein K04M3_22120 b9e1bb48ffa5a6ffe5a3eff85bc390ea 146 PIRSF PIRSF006173 1 144 1.6E-65 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 K04M3_22120 b9e1bb48ffa5a6ffe5a3eff85bc390ea 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.444 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 K04M3_32430 acac524d728495a4da21c54282d7c09d 405 Gene3D G3DSA:1.10.1660.30 36 102 6.7E-6 T 12-10-2018 K04M3_32430 acac524d728495a4da21c54282d7c09d 405 SUPERFAMILY SSF52540 108 367 1.68E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_32430 acac524d728495a4da21c54282d7c09d 405 Pfam PF13614 AAA domain 110 295 1.2E-22 T 12-10-2018 IPR025669 AAA domain K04M3_32430 acac524d728495a4da21c54282d7c09d 405 Gene3D G3DSA:3.40.50.300 107 397 1.7E-56 T 12-10-2018 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 9 406 2.7E-74 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 415 509 3.7E-20 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.4E-35 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 373 390 1.4E-35 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 1.4E-35 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.4E-35 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.4E-35 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.4E-35 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 SUPERFAMILY SSF55486 1 510 9.0E-113 T 12-10-2018 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 Gene3D G3DSA:1.10.1370.30 409 510 6.0E-43 T 12-10-2018 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PIRSF PIRSF006615 408 510 8.3E-43 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 PIRSF PIRSF006615 1 410 1.5E-159 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 K04M3_14520 0f1ac3f952ac8443afde1d878740a3bc 510 Gene3D G3DSA:1.10.1370.30 1 408 2.1E-155 T 12-10-2018 K04M3_37390 c7089bb1c3fb3038d72032ec4a5a045f 98 Pfam PF03889 Domain of unknown function 22 59 5.5E-21 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 K04M3_45470 afdfbfc1f5b24672e56c4be3213299aa 218 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 21 162 4.2E-40 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related K04M3_45470 afdfbfc1f5b24672e56c4be3213299aa 218 SUPERFAMILY SSF50475 2 184 2.36E-53 T 12-10-2018 K04M3_45470 afdfbfc1f5b24672e56c4be3213299aa 218 Gene3D G3DSA:2.30.110.10 2 217 1.9E-61 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 3.2E-154 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 SUPERFAMILY SSF52540 6 241 7.21E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 5.4E-58 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 SUPERFAMILY SSF52317 255 446 4.13E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 Gene3D G3DSA:3.40.50.880 255 432 9.8E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 Gene3D G3DSA:3.40.50.300 7 249 3.8E-57 T 12-10-2018 K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 197.234 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 K04M3_40460 df22fa76623eca1150bf9cf7f73ca40d 483 Pfam PF13500 AAA domain 7 236 6.2E-23 T 12-10-2018 K04M3_42530 0481d15a722983017cd09af717e80498 342 Gene3D G3DSA:2.40.230.10 77 341 1.0E-87 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 311 331 1.3E-29 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 124 141 1.3E-29 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 289 306 1.3E-29 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 189 1.3E-29 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 256 274 1.3E-29 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 Pfam PF02253 Phospholipase A1 78 338 2.5E-95 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_42530 0481d15a722983017cd09af717e80498 342 SUPERFAMILY SSF56931 78 341 7.32E-90 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 SUPERFAMILY SSF50156 239 346 1.84E-20 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 SUPERFAMILY SSF50494 43 265 5.15E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 Gene3D G3DSA:2.40.10.10 34 142 7.2E-33 T 12-10-2018 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 Pfam PF13180 PDZ domain 257 346 3.1E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 6.7E-166 T 12-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 Gene3D G3DSA:2.40.10.10 143 255 1.7E-35 T 12-10-2018 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 1.2E-32 T 12-10-2018 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 Gene3D G3DSA:2.30.42.10 256 354 7.4E-24 T 12-10-2018 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 9.0E-47 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 K04M3_04040 9c6c9464eb3ff014b3fcdf98effee83d 354 SMART SM00228 256 338 2.9E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 K04M3_34620 9c1ead7824c0a20266340ba7bbb1ff93 251 SUPERFAMILY SSF160527 132 241 2.75E-6 T 12-10-2018 K04M3_34620 9c1ead7824c0a20266340ba7bbb1ff93 251 Pfam PF02108 Flagellar assembly protein FliH 106 228 3.2E-28 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE K04M3_20560 716d52b8cecc5bf44e9b7ab538e33657 234 SMART SM00382 35 222 6.0E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_20560 716d52b8cecc5bf44e9b7ab538e33657 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_20560 716d52b8cecc5bf44e9b7ab538e33657 234 Gene3D G3DSA:3.40.50.300 4 231 1.1E-71 T 12-10-2018 K04M3_20560 716d52b8cecc5bf44e9b7ab538e33657 234 Pfam PF00005 ABC transporter 26 174 1.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_20560 716d52b8cecc5bf44e9b7ab538e33657 234 SUPERFAMILY SSF52540 6 226 3.41E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_45100 1dfd5c7d4bcfa9cbca56c23f8df67712 192 SUPERFAMILY SSF48695 16 191 2.47E-55 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_45100 1dfd5c7d4bcfa9cbca56c23f8df67712 192 Gene3D G3DSA:1.10.3820.10 11 188 4.8E-33 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily K04M3_45100 1dfd5c7d4bcfa9cbca56c23f8df67712 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 1.8E-69 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal K04M3_45100 1dfd5c7d4bcfa9cbca56c23f8df67712 192 PIRSF PIRSF000013 1 192 1.6E-90 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 8.8E-18 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 8.8E-18 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 8.8E-18 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 8.8E-18 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 Gene3D G3DSA:3.30.1150.10 104 206 1.5E-27 T 12-10-2018 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 3.1E-18 T 12-10-2018 IPR006260 TonB/TolA, C-terminal K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 127 204 2.5E-20 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 K04M3_48270 5886960fe2e43d71fad7c65fdb2dc887 206 SUPERFAMILY SSF74653 118 196 2.62E-24 T 12-10-2018 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.2E-126 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.8E-256 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 Pfam PF01578 Cytochrome C assembly protein 89 297 2.4E-54 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_22560 d18b2b99b2a84b9285f31ef46dd59cc2 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_48100 7bfefb37af7b775a06059ecee70e7e3d 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 5.7E-34 T 12-10-2018 K04M3_48100 7bfefb37af7b775a06059ecee70e7e3d 142 SUPERFAMILY SSF50630 6 140 1.83E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_48100 7bfefb37af7b775a06059ecee70e7e3d 142 Gene3D G3DSA:2.40.70.10 3 133 7.4E-34 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_21140 f8fcdf4afdf3e8cba293eba63e7fd629 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.1E-15 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD K04M3_23950 d5bded90998bf72e69b94a0d342ff8e9 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 K04M3_23950 d5bded90998bf72e69b94a0d342ff8e9 280 Pfam PF01148 Cytidylyltransferase family 2 280 6.3E-70 T 12-10-2018 K04M3_37660 c68431aeeff22eb8f1768cc2892bd803 589 SUPERFAMILY SSF75011 69 517 3.92E-15 T 12-10-2018 K04M3_37660 c68431aeeff22eb8f1768cc2892bd803 589 Gene3D G3DSA:2.130.10.10 47 339 3.5E-8 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 K04M3_20760 0ba7fe0382623c5bcefde697483cfb6b 548 Pfam PF02470 MlaD protein 287 391 7.3E-13 T 12-10-2018 IPR003399 Mce/MlaD K04M3_20760 0ba7fe0382623c5bcefde697483cfb6b 548 Pfam PF02470 MlaD protein 160 219 3.1E-7 T 12-10-2018 IPR003399 Mce/MlaD K04M3_20760 0ba7fe0382623c5bcefde697483cfb6b 548 Pfam PF02470 MlaD protein 43 134 1.4E-9 T 12-10-2018 IPR003399 Mce/MlaD K04M3_43910 a0be10476109959f39f3c50bd476bf00 335 PIRSF PIRSF000267 1 335 1.4E-90 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_43910 a0be10476109959f39f3c50bd476bf00 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 3.9E-99 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_43910 a0be10476109959f39f3c50bd476bf00 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 2.1E-44 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_49150 e65951f9d8a67162a4ad9b9fde7b44c2 285 SUPERFAMILY SSF53474 34 267 1.52E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_49150 e65951f9d8a67162a4ad9b9fde7b44c2 285 Pfam PF12146 Serine aminopeptidase, S33 83 192 1.2E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 K04M3_49150 e65951f9d8a67162a4ad9b9fde7b44c2 285 Gene3D G3DSA:3.40.50.1820 71 275 3.5E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_43180 d5795f89e59d83a6b4c232d5f833949a 128 Pfam PF00486 Transcriptional regulatory protein, C terminal 44 119 2.5E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_43180 d5795f89e59d83a6b4c232d5f833949a 128 SUPERFAMILY SSF46894 25 120 1.59E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_43180 d5795f89e59d83a6b4c232d5f833949a 128 SMART SM00862 43 119 6.2E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_43180 d5795f89e59d83a6b4c232d5f833949a 128 Gene3D G3DSA:1.10.10.10 15 128 4.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_05890 3c7a2df8381e5a52308d2e28f2fe27c8 496 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 64 406 6.7E-133 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 K04M3_05890 3c7a2df8381e5a52308d2e28f2fe27c8 496 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 60 496 31.287 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 K04M3_05890 3c7a2df8381e5a52308d2e28f2fe27c8 496 Pfam PF13742 OB-fold nucleic acid binding domain 63 156 7.2E-30 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 K04M3_05890 3c7a2df8381e5a52308d2e28f2fe27c8 496 Pfam PF02601 Exonuclease VII, large subunit 179 493 1.5E-100 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 K04M3_14860 4eda853e0f699328f97b86545d09b0f4 346 Gene3D G3DSA:3.40.50.720 6 315 8.9E-122 T 12-10-2018 K04M3_14860 4eda853e0f699328f97b86545d09b0f4 346 SUPERFAMILY SSF51735 4 204 4.39E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_14860 4eda853e0f699328f97b86545d09b0f4 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 3.1E-23 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 K04M3_14860 4eda853e0f699328f97b86545d09b0f4 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 195 1.5E-11 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 K04M3_14860 4eda853e0f699328f97b86545d09b0f4 346 Gene3D G3DSA:3.30.360.10 128 329 8.9E-122 T 12-10-2018 K04M3_15720 dab6eba7c74e123f41a7afd0477bc915 249 Pfam PF03942 DTW domain 30 221 1.5E-40 T 12-10-2018 IPR005636 DTW K04M3_15720 dab6eba7c74e123f41a7afd0477bc915 249 SMART SM01144 27 227 4.3E-63 T 12-10-2018 IPR005636 DTW K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.519 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 Gene3D G3DSA:3.40.50.150 1 198 1.4E-65 T 12-10-2018 K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 SUPERFAMILY SSF53335 8 267 5.31E-80 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 Gene3D G3DSA:1.10.8.100 200 267 1.4E-24 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 SMART SM00650 25 197 5.2E-89 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.7E-88 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 K04M3_03400 9dd6db9b2052e138739433ba7b4c3534 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 5.8E-78 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm K04M3_32060 b1ff72bf6ed489936bff8d747d92f961 334 Hamap MF_01497 Stress response kinase A [srkA]. 10 324 46.711 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 K04M3_32060 b1ff72bf6ed489936bff8d747d92f961 334 SUPERFAMILY SSF56112 11 334 1.34E-90 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_32060 b1ff72bf6ed489936bff8d747d92f961 334 Pfam PF01636 Phosphotransferase enzyme family 41 270 2.1E-39 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase K04M3_32060 b1ff72bf6ed489936bff8d747d92f961 334 Gene3D G3DSA:1.10.510.10 66 264 2.6E-123 T 12-10-2018 K04M3_32060 b1ff72bf6ed489936bff8d747d92f961 334 Gene3D G3DSA:3.30.200.70 19 114 2.6E-123 T 12-10-2018 K04M3_32060 b1ff72bf6ed489936bff8d747d92f961 334 Gene3D G3DSA:1.20.1270.170 155 313 2.6E-123 T 12-10-2018 K04M3_43360 83e889f2d184390b1f6bbf5cba08fe0b 311 Gene3D G3DSA:1.10.3470.10 1 311 4.1E-64 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_43360 83e889f2d184390b1f6bbf5cba08fe0b 311 SUPERFAMILY SSF81345 4 306 5.36E-65 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_43360 83e889f2d184390b1f6bbf5cba08fe0b 311 Pfam PF01032 FecCD transport family 8 306 4.1E-66 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.5E-8 T 12-10-2018 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.5E-39 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.4E-105 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 SMART SM00729 14 219 2.9E-5 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 Pfam PF04055 Radical SAM superfamily 19 181 4.5E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 Gene3D G3DSA:3.20.20.70 2 329 5.9E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.913 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 K04M3_21520 b802604e5d4c3809329c3cd99aee8d9e 329 SUPERFAMILY SSF102114 6 289 1.28E-70 T 12-10-2018 K04M3_23960 70662799bfbd4783121f85c675f52999 251 SUPERFAMILY SSF64005 9 234 9.02E-88 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 K04M3_23960 70662799bfbd4783121f85c675f52999 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 K04M3_23960 70662799bfbd4783121f85c675f52999 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.741 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 K04M3_23960 70662799bfbd4783121f85c675f52999 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 3.2E-94 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 K04M3_23960 70662799bfbd4783121f85c675f52999 251 Gene3D G3DSA:3.40.1180.10 1 239 9.0E-94 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 K04M3_23960 70662799bfbd4783121f85c675f52999 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.4E-80 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 K04M3_49020 64ecd0e86a23ad0f43d188f438368eb9 365 SMART SM00267 205 365 1.4E-27 T 12-10-2018 IPR000160 GGDEF domain K04M3_49020 64ecd0e86a23ad0f43d188f438368eb9 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 362 3.8E-32 T 12-10-2018 IPR000160 GGDEF domain K04M3_49020 64ecd0e86a23ad0f43d188f438368eb9 365 SUPERFAMILY SSF55073 222 363 1.57E-35 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_49020 64ecd0e86a23ad0f43d188f438368eb9 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 363 3.3E-32 T 12-10-2018 IPR000160 GGDEF domain K04M3_49020 64ecd0e86a23ad0f43d188f438368eb9 365 Gene3D G3DSA:3.30.70.270 213 365 1.3E-38 T 12-10-2018 K04M3_43150 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Gene3D G3DSA:3.40.720.10 31 437 4.5E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_43150 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 SUPERFAMILY SSF53649 30 482 9.3E-128 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_43150 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Pfam PF00884 Sulfatase 34 359 1.6E-65 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_43150 2dab58c9261bfa5bcafe2ac4fb2a9acc 508 Pfam PF14707 C-terminal region of aryl-sulfatase 399 500 4.5E-7 T 12-10-2018 K04M3_25250 7ae3da5b24e4908ef073ea41bea64e2e 379 PIRSF PIRSF004810 1 379 1.7E-115 T 12-10-2018 IPR014047 Chromate transporter, long chain K04M3_25250 7ae3da5b24e4908ef073ea41bea64e2e 379 Pfam PF02417 Chromate transporter 212 373 2.3E-34 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 K04M3_25250 7ae3da5b24e4908ef073ea41bea64e2e 379 Pfam PF02417 Chromate transporter 3 168 1.8E-33 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 K04M3_25250 7ae3da5b24e4908ef073ea41bea64e2e 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 6.2E-92 T 12-10-2018 IPR014047 Chromate transporter, long chain K04M3_33930 355511cfae1272a4f4ff89804e45635c 240 PIRSF PIRSF005426 1 240 7.4E-86 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 K04M3_33930 355511cfae1272a4f4ff89804e45635c 240 SUPERFAMILY SSF55469 1 238 1.44E-74 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_33930 355511cfae1272a4f4ff89804e45635c 240 Gene3D G3DSA:3.40.109.10 1 240 1.3E-78 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_33930 355511cfae1272a4f4ff89804e45635c 240 Pfam PF00881 Nitroreductase family 8 159 1.6E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 K04M3_10020 1b1d371d746242ef24499aa7c20328cf 741 PIRSF PIRSF009407 1 741 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 K04M3_10020 1b1d371d746242ef24499aa7c20328cf 741 SUPERFAMILY SSF53659 5 740 0.0 T 12-10-2018 K04M3_10020 1b1d371d746242ef24499aa7c20328cf 741 Gene3D G3DSA:3.40.718.10 411 650 6.0E-8 T 12-10-2018 K04M3_10020 1b1d371d746242ef24499aa7c20328cf 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 K04M3_10020 1b1d371d746242ef24499aa7c20328cf 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 Gene3D G3DSA:3.40.190.10 95 300 4.4E-53 T 12-10-2018 K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 Gene3D G3DSA:3.40.190.10 168 273 4.4E-53 T 12-10-2018 K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 Pfam PF03466 LysR substrate binding domain 93 301 4.9E-30 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 SUPERFAMILY SSF53850 93 302 1.47E-34 T 12-10-2018 K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 SUPERFAMILY SSF46785 10 116 7.39E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 Gene3D G3DSA:1.10.10.10 7 92 4.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_37970 865fd5819843c8c03b2d369df865ed06 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_46430 4b12a322f3b3d39520a749c0899cb064 296 SUPERFAMILY SSF161098 24 291 7.66E-40 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_46430 4b12a322f3b3d39520a749c0899cb064 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 283 1.8E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_46430 4b12a322f3b3d39520a749c0899cb064 296 Gene3D G3DSA:1.10.3720.10 23 285 2.1E-32 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_32530 ebd1cfdd82094d00e3355ffe43836d90 283 SUPERFAMILY SSF46689 2 77 2.15E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_32530 ebd1cfdd82094d00e3355ffe43836d90 283 Pfam PF01380 SIS domain 129 257 1.1E-17 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 K04M3_32530 ebd1cfdd82094d00e3355ffe43836d90 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 5.2E-18 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 K04M3_32530 ebd1cfdd82094d00e3355ffe43836d90 283 Gene3D G3DSA:1.10.10.10 1 76 4.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32530 ebd1cfdd82094d00e3355ffe43836d90 283 Gene3D G3DSA:3.40.50.10490 97 279 8.9E-40 T 12-10-2018 K04M3_32530 ebd1cfdd82094d00e3355ffe43836d90 283 SUPERFAMILY SSF53697 104 277 4.71E-38 T 12-10-2018 K04M3_46890 ac8c221423f134e4f72d9976988241d5 351 Pfam PF03060 Nitronate monooxygenase 8 346 1.5E-71 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 K04M3_46890 ac8c221423f134e4f72d9976988241d5 351 SUPERFAMILY SSF51412 10 330 2.44E-61 T 12-10-2018 K04M3_46890 ac8c221423f134e4f72d9976988241d5 351 Gene3D G3DSA:3.20.20.70 5 349 3.4E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_03670 78b701430d108d3ca7a3c5cee90c12af 176 SUPERFAMILY SSF158668 4 170 4.84E-58 T 12-10-2018 IPR038026 MtlR-like superfamily K04M3_03670 78b701430d108d3ca7a3c5cee90c12af 176 Pfam PF05068 Mannitol repressor 7 170 2.7E-61 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like K04M3_03670 78b701430d108d3ca7a3c5cee90c12af 176 Gene3D G3DSA:1.20.120.330 1 172 1.1E-71 T 12-10-2018 K04M3_03410 fd2f5980027f5b1a925a56b5e20e9a60 332 Gene3D G3DSA:3.40.718.10 1 332 4.5E-122 T 12-10-2018 K04M3_03410 fd2f5980027f5b1a925a56b5e20e9a60 332 SUPERFAMILY SSF53659 7 329 7.2E-110 T 12-10-2018 K04M3_03410 fd2f5980027f5b1a925a56b5e20e9a60 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 5.9E-107 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 K04M3_03410 fd2f5980027f5b1a925a56b5e20e9a60 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 36.3 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 K04M3_03410 fd2f5980027f5b1a925a56b5e20e9a60 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 3.7E-127 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 K04M3_46760 ac03ca70c7aa8e24b857c68b5a0988ae 204 Pfam PF01389 OmpA-like transmembrane domain 22 204 2.5E-23 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 K04M3_46760 ac03ca70c7aa8e24b857c68b5a0988ae 204 SUPERFAMILY SSF56925 21 204 1.36E-28 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_46760 ac03ca70c7aa8e24b857c68b5a0988ae 204 Gene3D G3DSA:2.40.160.20 7 204 6.1E-39 T 12-10-2018 K04M3_19850 695bdb4208a8d0113d9aa95e23e56077 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 1.2E-79 T 12-10-2018 IPR005614 NrfD family K04M3_19850 695bdb4208a8d0113d9aa95e23e56077 323 Gene3D G3DSA:1.20.1630.10 7 284 4.3E-13 T 12-10-2018 K04M3_19850 695bdb4208a8d0113d9aa95e23e56077 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 2.5E-146 T 12-10-2018 IPR017566 NrfD K04M3_42770 62301683f4fb1cabfa4440fda353d052 152 Pfam PF00293 NUDIX domain 16 123 6.3E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_42770 62301683f4fb1cabfa4440fda353d052 152 Gene3D G3DSA:3.90.79.10 6 136 1.0E-23 T 12-10-2018 K04M3_42770 62301683f4fb1cabfa4440fda353d052 152 SUPERFAMILY SSF55811 9 138 1.49E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_01220 89044bf0052c03982689388375751369 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.1E-42 T 12-10-2018 IPR013545 Type II secretion system protein G K04M3_01220 89044bf0052c03982689388375751369 147 Gene3D G3DSA:3.30.700.10 33 141 2.4E-44 T 12-10-2018 K04M3_01220 89044bf0052c03982689388375751369 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 K04M3_01220 89044bf0052c03982689388375751369 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 K04M3_01220 89044bf0052c03982689388375751369 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 8.6E-58 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 K04M3_01220 89044bf0052c03982689388375751369 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01220 89044bf0052c03982689388375751369 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 2.8E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01220 89044bf0052c03982689388375751369 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.3E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_01220 89044bf0052c03982689388375751369 147 SUPERFAMILY SSF54523 36 142 1.99E-38 T 12-10-2018 K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 679 9.3E-37 T 12-10-2018 IPR000160 GGDEF domain K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 SUPERFAMILY SSF55781 153 313 3.93E-6 T 12-10-2018 K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 SUPERFAMILY SSF55073 520 682 1.88E-37 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 Gene3D G3DSA:3.30.70.270 500 683 2.5E-43 T 12-10-2018 K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 516 676 9.7E-35 T 12-10-2018 IPR000160 GGDEF domain K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 SUPERFAMILY SSF55781 324 496 1.77E-5 T 12-10-2018 K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 Gene3D G3DSA:3.30.450.40 157 316 8.4E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_35350 7e0226705cb3bced761ca31b86a6113d 690 SMART SM00267 504 681 1.4E-42 T 12-10-2018 IPR000160 GGDEF domain K04M3_37320 69c33c6306e2216c598dfdacb0ad6f72 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 67 154 6.5E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain K04M3_37320 69c33c6306e2216c598dfdacb0ad6f72 157 SUPERFAMILY SSF54534 19 156 9.53E-52 T 12-10-2018 K04M3_37320 69c33c6306e2216c598dfdacb0ad6f72 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 1.9E-11 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 K04M3_37320 69c33c6306e2216c598dfdacb0ad6f72 157 Gene3D G3DSA:3.10.50.40 21 157 2.0E-52 T 12-10-2018 K04M3_44610 deb69db953990f5d981755dc73397374 383 SUPERFAMILY SSF56601 27 379 2.25E-86 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_44610 deb69db953990f5d981755dc73397374 383 Gene3D G3DSA:3.40.710.10 23 383 1.2E-119 T 12-10-2018 K04M3_44610 deb69db953990f5d981755dc73397374 383 Pfam PF00144 Beta-lactamase 35 379 2.4E-72 T 12-10-2018 IPR001466 Beta-lactamase-related K04M3_44610 deb69db953990f5d981755dc73397374 383 ProSitePatterns PS00336 Beta-lactamase class-C active site. 82 89 - T 12-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 K04M3_39120 f501ede5cb4c547ababe11175d4e86b3 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 306 1.7E-58 T 12-10-2018 IPR010732 Type VI secretion, TssG-like K04M3_39120 f501ede5cb4c547ababe11175d4e86b3 321 Pfam PF06996 Type VI secretion, TssG 11 306 5.2E-65 T 12-10-2018 IPR010732 Type VI secretion, TssG-like K04M3_43530 0e99579284644504b0c765f474774831 226 Pfam PF09335 SNARE associated Golgi protein 55 174 4.5E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein K04M3_39850 b9fa57cc3530bbad0f1a4715d0dcb17c 118 Gene3D G3DSA:1.10.10.10 8 118 2.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_39850 b9fa57cc3530bbad0f1a4715d0dcb17c 118 SUPERFAMILY SSF46785 24 116 9.49E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_33100 ef459da7a5ff853b279422171c1a7e81 663 Pfam PF01136 Peptidase family U32 447 591 4.9E-8 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_33100 ef459da7a5ff853b279422171c1a7e81 663 Pfam PF01136 Peptidase family U32 78 293 1.4E-64 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_01540 b29c3af0f295a3ab205c04686a04f3b4 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 169 1.0E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_01540 b29c3af0f295a3ab205c04686a04f3b4 866 Pfam PF00593 TonB dependent receptor 354 864 2.7E-50 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_01540 b29c3af0f295a3ab205c04686a04f3b4 866 Gene3D G3DSA:2.170.130.10 33 172 2.8E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_01540 b29c3af0f295a3ab205c04686a04f3b4 866 SUPERFAMILY SSF56935 28 866 1.53E-96 T 12-10-2018 K04M3_09590 70dd7b4cdb7a9e802c5f620cf78d9927 465 SUPERFAMILY SSF48452 122 258 2.04E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_45690 67bd167346018d825974f35957b06523 98 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 24 94 4.1E-7 T 12-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 K04M3_45690 67bd167346018d825974f35957b06523 98 SUPERFAMILY SSF81296 11 95 7.46E-15 T 12-10-2018 IPR014756 Immunoglobulin E-set K04M3_45690 67bd167346018d825974f35957b06523 98 Gene3D G3DSA:2.60.40.10 6 95 4.2E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_28690 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 3 89 3.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_28690 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:3.30.1490.190 90 150 2.4E-16 T 12-10-2018 K04M3_28690 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_28690 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 4.4E-46 T 12-10-2018 IPR012660 Thioesterase, putative K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 SUPERFAMILY SSF54637 154 296 3.17E-41 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.6E-53 T 12-10-2018 IPR012660 Thioesterase, putative K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 Pfam PF13673 Acetyltransferase (GNAT) domain 48 144 1.2E-11 T 12-10-2018 IPR000182 GNAT domain K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 Gene3D G3DSA:3.40.630.30 3 145 4.0E-28 T 12-10-2018 K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 Gene3D G3DSA:3.10.129.10 147 298 3.6E-48 T 12-10-2018 K04M3_01130 9bde279ddbbd41cf3bca3d738f74f571 305 SUPERFAMILY SSF55729 2 159 7.27E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 Gene3D G3DSA:1.25.40.10 483 648 5.7E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 Gene3D G3DSA:1.25.40.10 151 479 1.4E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 Pfam PF14280 Domain of unknown function (DUF4365) 21 157 9.9E-20 T 12-10-2018 IPR025375 Domain of unknown function DUF4365 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 Pfam PF13414 TPR repeat 578 619 1.3E-9 T 12-10-2018 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SUPERFAMILY SSF48452 255 347 6.51E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 Pfam PF13432 Tetratricopeptide repeat 321 381 2.9E-8 T 12-10-2018 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SUPERFAMILY SSF48452 319 638 1.08E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SMART SM00028 571 604 6.4E-8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SMART SM00028 316 349 0.012 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SMART SM00028 276 308 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SMART SM00028 505 538 55.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SMART SM00028 605 638 51.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_05930 6ec8a3e05f49acffa06ccd95e48edfdd 657 SMART SM00028 350 383 0.032 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_42320 0096d4894226ad6e46bae62b4ad5ac6d 242 SUPERFAMILY SSF46689 9 86 2.98E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_42320 0096d4894226ad6e46bae62b4ad5ac6d 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_42320 0096d4894226ad6e46bae62b4ad5ac6d 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_42320 0096d4894226ad6e46bae62b4ad5ac6d 242 Gene3D G3DSA:1.10.357.10 1 205 3.3E-25 T 12-10-2018 K04M3_42320 0096d4894226ad6e46bae62b4ad5ac6d 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_27960 37c3fd490ddf6234959edd069c22f5c4 248 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_27960 37c3fd490ddf6234959edd069c22f5c4 248 SUPERFAMILY SSF52540 2 217 7.72E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_27960 37c3fd490ddf6234959edd069c22f5c4 248 SMART SM00382 12 209 2.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_27960 37c3fd490ddf6234959edd069c22f5c4 248 Pfam PF00005 ABC transporter 4 151 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_27960 37c3fd490ddf6234959edd069c22f5c4 248 Gene3D G3DSA:3.40.50.300 1 234 6.1E-64 T 12-10-2018 K04M3_41680 52916586bc73b6f55e6fa762d3b50312 311 SUPERFAMILY SSF50891 185 292 1.29E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_41680 52916586bc73b6f55e6fa762d3b50312 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 8.0E-83 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B K04M3_41680 52916586bc73b6f55e6fa762d3b50312 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 292 7.5E-77 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B K04M3_41680 52916586bc73b6f55e6fa762d3b50312 311 SMART SM00797 27 309 8.6E-130 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B K04M3_41680 52916586bc73b6f55e6fa762d3b50312 311 Gene3D G3DSA:2.40.100.10 182 307 2.1E-40 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_11850 213cc65cccc08a4a9395cb3026f2f293 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 8.8E-145 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 K04M3_11850 213cc65cccc08a4a9395cb3026f2f293 383 Gene3D G3DSA:1.20.1530.10 3 381 6.0E-148 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily K04M3_11850 213cc65cccc08a4a9395cb3026f2f293 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.587 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 K04M3_11850 213cc65cccc08a4a9395cb3026f2f293 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.6E-193 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 K04M3_40520 4a7ef19f463bd64a88ba0c7eba0726a5 386 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 384 2.2E-29 T 12-10-2018 IPR000160 GGDEF domain K04M3_40520 4a7ef19f463bd64a88ba0c7eba0726a5 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 318 1.7E-22 T 12-10-2018 IPR000160 GGDEF domain K04M3_40520 4a7ef19f463bd64a88ba0c7eba0726a5 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 381 1.1E-6 T 12-10-2018 IPR000160 GGDEF domain K04M3_40520 4a7ef19f463bd64a88ba0c7eba0726a5 386 Gene3D G3DSA:3.30.70.270 203 385 3.9E-45 T 12-10-2018 K04M3_40520 4a7ef19f463bd64a88ba0c7eba0726a5 386 SMART SM00267 201 386 5.5E-36 T 12-10-2018 IPR000160 GGDEF domain K04M3_40520 4a7ef19f463bd64a88ba0c7eba0726a5 386 SUPERFAMILY SSF55073 217 384 1.65E-32 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_34200 cb8bb95539ab4c3c8fbaef486e9b43f9 289 SUPERFAMILY SSF103481 184 280 7.19E-11 T 12-10-2018 K04M3_34200 cb8bb95539ab4c3c8fbaef486e9b43f9 289 Pfam PF00892 EamA-like transporter family 146 275 1.4E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_34200 cb8bb95539ab4c3c8fbaef486e9b43f9 289 Pfam PF00892 EamA-like transporter family 4 135 1.8E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_34200 cb8bb95539ab4c3c8fbaef486e9b43f9 289 SUPERFAMILY SSF103481 39 139 4.05E-8 T 12-10-2018 K04M3_09060 05a8fed10b39c894c9d86369b37f630e 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 2.1E-27 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ K04M3_29480 5d13f482c13d96277a60bb4ea31da7cc 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 3.0E-28 T 12-10-2018 IPR001107 Band 7 domain K04M3_29480 5d13f482c13d96277a60bb4ea31da7cc 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.2E-136 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 K04M3_29480 5d13f482c13d96277a60bb4ea31da7cc 326 SUPERFAMILY SSF117892 56 223 2.35E-21 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily K04M3_29480 5d13f482c13d96277a60bb4ea31da7cc 326 SMART SM00244 18 218 6.2E-50 T 12-10-2018 IPR001107 Band 7 domain K04M3_29480 5d13f482c13d96277a60bb4ea31da7cc 326 PIRSF PIRSF005651 1 326 2.7E-96 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 K04M3_48040 ab7e3629c7cbc6ccfbb193a3187ca9ba 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.4E-33 T 12-10-2018 IPR007416 Protein of unknown function DUF469 K04M3_19730 e0233c61cdb25d399925bb73dee421a1 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 4.1E-29 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_19730 e0233c61cdb25d399925bb73dee421a1 218 Gene3D G3DSA:3.60.15.10 3 213 2.4E-74 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_19730 e0233c61cdb25d399925bb73dee421a1 218 SMART SM00849 14 195 1.5E-36 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_19730 e0233c61cdb25d399925bb73dee421a1 218 SUPERFAMILY SSF56281 5 211 2.98E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_47980 57c57ff88c01a54bec05f9ed685bf637 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 4.6E-104 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 K04M3_47980 57c57ff88c01a54bec05f9ed685bf637 436 Pfam PF05525 Branched-chain amino acid transport protein 5 422 2.8E-113 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 711 4.1E-125 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 Gene3D G3DSA:2.40.170.20 168 711 7.0E-135 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 SUPERFAMILY SSF56935 26 711 8.11E-134 T 12-10-2018 K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 2.0E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 Gene3D G3DSA:2.170.130.10 33 167 8.9E-32 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 12-10-2018 IPR010916 TonB box, conserved site K04M3_17680 e854de2ff8e29b7bab959f15e05299de 711 Pfam PF00593 TonB dependent receptor 229 710 4.6E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_32490 0af65b027073bf39b39738455855dedb 221 Gene3D G3DSA:3.40.50.880 21 216 9.6E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_32490 0af65b027073bf39b39738455855dedb 221 Pfam PF03575 Peptidase family S51 6 196 6.9E-41 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 K04M3_32490 0af65b027073bf39b39738455855dedb 221 SUPERFAMILY SSF52317 24 196 1.98E-26 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 Gene3D G3DSA:3.40.50.720 4 318 2.3E-132 T 12-10-2018 K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.4E-50 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 SUPERFAMILY SSF52283 1 136 3.19E-41 T 12-10-2018 K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 Gene3D G3DSA:3.40.50.720 103 298 2.3E-132 T 12-10-2018 K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 SUPERFAMILY SSF51735 103 299 5.64E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site K04M3_48370 d79edd2ff9cd06d2f6fbe0760b752d19 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 6.7E-34 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 K04M3_02910 dd1060e53dec82f0257041c483bb15ae 206 Gene3D G3DSA:3.10.50.40 68 206 1.6E-49 T 12-10-2018 K04M3_02910 dd1060e53dec82f0257041c483bb15ae 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.4E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain K04M3_02910 dd1060e53dec82f0257041c483bb15ae 206 SUPERFAMILY SSF54534 7 205 1.18E-53 T 12-10-2018 K04M3_02910 dd1060e53dec82f0257041c483bb15ae 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.7E-23 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 K04M3_02910 dd1060e53dec82f0257041c483bb15ae 206 Gene3D G3DSA:1.10.287.460 4 67 2.6E-19 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 K04M3_11470 e1c06e778b31a2500b6b745a3832028f 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 6.7E-48 T 12-10-2018 IPR014320 Phage shock protein, PspC K04M3_11470 e1c06e778b31a2500b6b745a3832028f 139 Pfam PF04024 PspC domain 14 72 9.1E-16 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal K04M3_00630 1ef52d81e0e657066c84b1d874057497 259 Gene3D G3DSA:3.40.50.150 57 259 2.8E-75 T 12-10-2018 K04M3_00630 1ef52d81e0e657066c84b1d874057497 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 1.3E-106 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 K04M3_00630 1ef52d81e0e657066c84b1d874057497 259 Gene3D G3DSA:3.40.1630.10 1 56 1.7E-20 T 12-10-2018 K04M3_00630 1ef52d81e0e657066c84b1d874057497 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.756 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 K04M3_00630 1ef52d81e0e657066c84b1d874057497 259 SUPERFAMILY SSF53335 4 255 3.12E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_37450 05a66b6da1266d40a814d49d6bd6f3d6 474 SUPERFAMILY SSF56954 3 432 1.44E-71 T 12-10-2018 K04M3_37450 05a66b6da1266d40a814d49d6bd6f3d6 474 Gene3D G3DSA:1.20.1600.10 26 449 7.2E-75 T 12-10-2018 K04M3_37450 05a66b6da1266d40a814d49d6bd6f3d6 474 Pfam PF02321 Outer membrane efflux protein 242 430 5.2E-34 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_37450 05a66b6da1266d40a814d49d6bd6f3d6 474 Pfam PF02321 Outer membrane efflux protein 28 213 1.3E-20 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_38800 ffb466d9bbd04d9c1e32cbf7635d58c4 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 5.7E-42 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 K04M3_38800 ffb466d9bbd04d9c1e32cbf7635d58c4 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_38800 ffb466d9bbd04d9c1e32cbf7635d58c4 301 SUPERFAMILY SSF53790 49 288 8.51E-67 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 K04M3_38800 ffb466d9bbd04d9c1e32cbf7635d58c4 301 Gene3D G3DSA:3.40.1010.10 49 166 8.7E-42 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 K04M3_38800 ffb466d9bbd04d9c1e32cbf7635d58c4 301 Gene3D G3DSA:3.30.950.10 167 295 4.0E-35 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 K04M3_38800 ffb466d9bbd04d9c1e32cbf7635d58c4 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 3.7E-84 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 K04M3_13610 19ceeae11ab05451f4e8f5995f6cf9da 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 109 8.8E-40 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 K04M3_13610 19ceeae11ab05451f4e8f5995f6cf9da 110 SUPERFAMILY SSF103481 10 108 1.18E-7 T 12-10-2018 K04M3_13610 19ceeae11ab05451f4e8f5995f6cf9da 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.3 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 K04M3_06990 cd22f5a30f83b1f3be73514684b17f05 145 Gene3D G3DSA:3.40.1280.10 1 145 1.7E-48 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal K04M3_06990 cd22f5a30f83b1f3be73514684b17f05 145 PIRSF PIRSF004505 1 144 8.0E-41 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 K04M3_06990 cd22f5a30f83b1f3be73514684b17f05 145 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 144 22.911 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 K04M3_06990 cd22f5a30f83b1f3be73514684b17f05 145 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 145 1.4E-72 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 K04M3_06990 cd22f5a30f83b1f3be73514684b17f05 145 Pfam PF02590 Predicted SPOUT methyltransferase 2 143 2.8E-44 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 K04M3_06990 cd22f5a30f83b1f3be73514684b17f05 145 SUPERFAMILY SSF75217 1 143 9.94E-47 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases K04M3_48690 e0d731b3ba5af1d4945c571d394247f9 299 Pfam PF00892 EamA-like transporter family 151 283 1.0E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_48690 e0d731b3ba5af1d4945c571d394247f9 299 Pfam PF00892 EamA-like transporter family 9 135 1.6E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_48690 e0d731b3ba5af1d4945c571d394247f9 299 SUPERFAMILY SSF103481 188 285 1.83E-12 T 12-10-2018 K04M3_48690 e0d731b3ba5af1d4945c571d394247f9 299 SUPERFAMILY SSF103481 42 138 3.01E-12 T 12-10-2018 K04M3_27090 ecdf468a61bbec4a760bc4942f14e57d 160 Pfam PF04073 Aminoacyl-tRNA editing domain 41 148 1.8E-17 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 K04M3_27090 ecdf468a61bbec4a760bc4942f14e57d 160 SUPERFAMILY SSF55826 6 152 3.4E-31 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_27090 ecdf468a61bbec4a760bc4942f14e57d 160 Gene3D G3DSA:3.90.960.10 5 159 1.5E-22 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_01690 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_01690 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_01690 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 78 4.9E-33 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_01690 b599e7839223f9d627e9532763988061 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_01690 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_29770 05b68189b704e80d034d988047e28e46 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 2.1E-59 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_29770 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_29770 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_29770 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_29770 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_29770 05b68189b704e80d034d988047e28e46 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.146 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_29770 05b68189b704e80d034d988047e28e46 154 Gene3D G3DSA:3.10.420.10 4 154 2.5E-58 T 12-10-2018 IPR035958 SecB-like superfamily K04M3_29770 05b68189b704e80d034d988047e28e46 154 SUPERFAMILY SSF54611 4 143 3.71E-52 T 12-10-2018 IPR035958 SecB-like superfamily K04M3_29770 05b68189b704e80d034d988047e28e46 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.8E-55 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 K04M3_02650 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 K04M3_02650 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 K04M3_02650 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily K04M3_02650 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_02650 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 6.0E-40 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 2.5E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 1.5E-48 T 12-10-2018 IPR022161 DNA helicase IV, N-terminal domain K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 Gene3D G3DSA:3.40.50.300 507 682 3.5E-29 T 12-10-2018 K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 SUPERFAMILY SSF52540 198 678 2.38E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 Gene3D G3DSA:3.40.50.300 200 499 1.0E-49 T 12-10-2018 K04M3_43240 1652a770a1414a39b661af3fc4e53cd9 689 Gene3D G3DSA:1.10.10.160 300 416 1.0E-49 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily K04M3_08090 7b17731b1a322ead51c2e865b9d5288f 116 SMART SM00938 6 104 7.6E-6 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 K04M3_08090 7b17731b1a322ead51c2e865b9d5288f 116 Gene3D G3DSA:3.30.70.120 1 104 1.3E-14 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal K04M3_08090 7b17731b1a322ead51c2e865b9d5288f 116 SUPERFAMILY SSF54913 1 102 1.11E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta K04M3_28450 e66f4f5a54bcc9b30ec600a900566eee 67 Pfam PF13683 Integrase core domain 1 60 3.7E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 K04M3_28450 e66f4f5a54bcc9b30ec600a900566eee 67 SUPERFAMILY SSF53098 2 64 5.31E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_44840 879b3d4db2af8b4de031d264c6871069 249 SUPERFAMILY SSF69572 4 249 1.11E-84 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 K04M3_44840 879b3d4db2af8b4de031d264c6871069 249 Pfam PF00899 ThiF family 12 245 1.2E-62 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 K04M3_44840 879b3d4db2af8b4de031d264c6871069 249 Gene3D G3DSA:3.40.50.720 4 249 9.8E-86 T 12-10-2018 K04M3_44840 879b3d4db2af8b4de031d264c6871069 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 1.9E-132 T 12-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 K04M3_33520 6f8f3a8a63f69f98aafc4574c99d7da7 513 Pfam PF00474 Sodium:solute symporter family 34 425 7.6E-52 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_33520 6f8f3a8a63f69f98aafc4574c99d7da7 513 Gene3D G3DSA:1.20.1730.10 7 511 5.2E-104 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_33520 6f8f3a8a63f69f98aafc4574c99d7da7 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 425 2.1E-74 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_42000 dff932ecff254abdc35707bc98a77aa4 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 8.7E-29 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 K04M3_42880 5d02902e52d650acead9624374f8c08b 295 SUPERFAMILY SSF53850 96 293 1.38E-11 T 12-10-2018 K04M3_42880 5d02902e52d650acead9624374f8c08b 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_42880 5d02902e52d650acead9624374f8c08b 295 SUPERFAMILY SSF46785 4 81 5.89E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_42880 5d02902e52d650acead9624374f8c08b 295 Gene3D G3DSA:3.40.190.290 96 292 7.3E-7 T 12-10-2018 K04M3_42880 5d02902e52d650acead9624374f8c08b 295 Gene3D G3DSA:1.10.10.10 1 86 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36040 406bcbf59616c8468119c6d5a1de5f5c 177 SUPERFAMILY SSF52374 1 172 1.44E-26 T 12-10-2018 K04M3_36040 406bcbf59616c8468119c6d5a1de5f5c 177 Pfam PF01467 Cytidylyltransferase-like 6 144 4.0E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 K04M3_36040 406bcbf59616c8468119c6d5a1de5f5c 177 Gene3D G3DSA:3.40.50.620 1 177 1.8E-46 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_10300 4bddaee4f981d97adf07ed139585b6b7 248 SUPERFAMILY SSF50630 107 242 7.5E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_10300 4bddaee4f981d97adf07ed139585b6b7 248 Gene3D G3DSA:2.40.70.10 104 235 3.3E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily K04M3_10300 4bddaee4f981d97adf07ed139585b6b7 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 2.2E-47 T 12-10-2018 K04M3_23090 9a10c8c3d7d9232d65bdf5764d91815b 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.256 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC K04M3_23090 9a10c8c3d7d9232d65bdf5764d91815b 339 PIRSF PIRSF026343 4 339 4.0E-118 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC K04M3_23090 9a10c8c3d7d9232d65bdf5764d91815b 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 3.3E-103 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein K04M3_23090 9a10c8c3d7d9232d65bdf5764d91815b 339 Gene3D G3DSA:3.30.310.170 221 339 3.7E-42 T 12-10-2018 K04M3_23090 9a10c8c3d7d9232d65bdf5764d91815b 339 Gene3D G3DSA:3.30.530.50 97 207 5.8E-12 T 12-10-2018 K04M3_18280 02f31c35551c4a6db5132cebd71f747a 158 SUPERFAMILY SSF55729 1 158 1.28E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_18280 02f31c35551c4a6db5132cebd71f747a 158 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 3.2E-14 T 12-10-2018 IPR000182 GNAT domain K04M3_18280 02f31c35551c4a6db5132cebd71f747a 158 Gene3D G3DSA:3.40.630.30 1 158 5.9E-27 T 12-10-2018 K04M3_37910 e6b7ce4281e99d7768a8636a3c8e9032 274 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 268 1.4E-64 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 K04M3_37910 e6b7ce4281e99d7768a8636a3c8e9032 274 Gene3D G3DSA:3.40.190.10 96 230 8.1E-81 T 12-10-2018 K04M3_37910 e6b7ce4281e99d7768a8636a3c8e9032 274 Pfam PF12849 PBP superfamily domain 18 255 1.5E-36 T 12-10-2018 IPR024370 PBP domain K04M3_37910 e6b7ce4281e99d7768a8636a3c8e9032 274 SUPERFAMILY SSF53850 23 269 2.23E-65 T 12-10-2018 K04M3_37910 e6b7ce4281e99d7768a8636a3c8e9032 274 Gene3D G3DSA:3.40.190.10 25 268 8.1E-81 T 12-10-2018 K04M3_47780 043ca9958406cea9c44329e0977baab5 192 Gene3D G3DSA:2.170.170.11 18 134 1.5E-28 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_47780 043ca9958406cea9c44329e0977baab5 192 SUPERFAMILY SSF51645 20 187 1.96E-24 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 K04M3_37550 7d1aa7591f6c5ce38479561dc0f21d01 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 6.8E-111 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase K04M3_37550 7d1aa7591f6c5ce38479561dc0f21d01 358 SUPERFAMILY SSF50952 17 350 1.7E-39 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 K04M3_37550 7d1aa7591f6c5ce38479561dc0f21d01 358 Gene3D G3DSA:2.120.10.30 15 358 3.3E-100 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like K04M3_14600 fc6f24b5add88f76350faaf2d5a8e851 649 SUPERFAMILY SSF53649 283 595 9.03E-70 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_14600 fc6f24b5add88f76350faaf2d5a8e851 649 Gene3D G3DSA:3.30.1120.80 248 644 3.9E-201 T 12-10-2018 K04M3_14600 fc6f24b5add88f76350faaf2d5a8e851 649 Pfam PF00884 Sulfatase 285 555 3.9E-51 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_14600 fc6f24b5add88f76350faaf2d5a8e851 649 Gene3D G3DSA:3.40.720.10 276 572 3.9E-201 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_14600 fc6f24b5add88f76350faaf2d5a8e851 649 PIRSF PIRSF005091 15 648 1.8E-102 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like K04M3_17340 cb72249ce411f1e1832ba8f1df7cee97 228 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 171 190 9.4E-25 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_17340 cb72249ce411f1e1832ba8f1df7cee97 228 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 47 66 9.4E-25 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_17340 cb72249ce411f1e1832ba8f1df7cee97 228 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 149 171 9.4E-25 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_17340 cb72249ce411f1e1832ba8f1df7cee97 228 Pfam PF01311 Bacterial export proteins, family 1 5 213 2.6E-52 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 K04M3_17340 cb72249ce411f1e1832ba8f1df7cee97 228 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 2 220 2.1E-71 T 12-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 K04M3_32380 caf984ea633fd96c8851913472050014 107 Pfam PF00825 Ribonuclease P 1 101 2.6E-31 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 K04M3_32380 caf984ea633fd96c8851913472050014 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.182 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 K04M3_32380 caf984ea633fd96c8851913472050014 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 103 2.1E-27 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 K04M3_32380 caf984ea633fd96c8851913472050014 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 K04M3_32380 caf984ea633fd96c8851913472050014 107 Gene3D G3DSA:3.30.230.10 1 107 3.4E-38 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_32380 caf984ea633fd96c8851913472050014 107 SUPERFAMILY SSF54211 1 103 1.24E-28 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_32380 caf984ea633fd96c8851913472050014 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 9.0E-46 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 K04M3_13870 b6f05a7c21013fbdb983bc11db24fbd9 108 Gene3D G3DSA:3.40.50.12330 1 44 1.6E-13 T 12-10-2018 K04M3_13870 b6f05a7c21013fbdb983bc11db24fbd9 108 Gene3D G3DSA:3.40.50.2300 45 108 7.2E-23 T 12-10-2018 K04M3_13870 b6f05a7c21013fbdb983bc11db24fbd9 108 SMART SM00448 2 104 1.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_13870 b6f05a7c21013fbdb983bc11db24fbd9 108 SUPERFAMILY SSF52172 3 107 4.13E-32 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_13870 b6f05a7c21013fbdb983bc11db24fbd9 108 Pfam PF00072 Response regulator receiver domain 5 104 1.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_24120 b0cba804a50becb323bb4945daad46a6 328 SUPERFAMILY SSF51735 1 326 5.19E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_24120 b0cba804a50becb323bb4945daad46a6 328 Gene3D G3DSA:3.40.50.720 1 328 7.2E-66 T 12-10-2018 K04M3_24120 b0cba804a50becb323bb4945daad46a6 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 7.4E-33 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 K04M3_39550 8cf169daaac81e6121b9ab39715dc559 204 SUPERFAMILY SSF52540 1 186 3.07E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39550 8cf169daaac81e6121b9ab39715dc559 204 Gene3D G3DSA:3.40.50.300 1 188 2.5E-30 T 12-10-2018 K04M3_39550 8cf169daaac81e6121b9ab39715dc559 204 Pfam PF01712 Deoxynucleoside kinase 3 174 1.4E-22 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain K04M3_52280 7d7f5f1afd53d30e407206b756c2cec7 1067 Gene3D G3DSA:3.40.50.300 732 945 1.8E-10 T 12-10-2018 K04M3_52280 7d7f5f1afd53d30e407206b756c2cec7 1067 SUPERFAMILY SSF52540 446 917 1.59E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 SMART SM00344 1 95 1.4E-9 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 Gene3D G3DSA:3.30.70.920 51 122 4.2E-14 T 12-10-2018 K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 Pfam PF01037 Lrp/AsnC ligand binding domain 56 123 1.9E-11 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 36 2.5E-7 T 12-10-2018 K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 SUPERFAMILY SSF54909 54 126 2.28E-11 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 SUPERFAMILY SSF46785 2 46 1.33E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 16 35 5.7E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 16 5.7E-7 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_19100 617310f2a1498276b3ab94cfe13f1262 129 Gene3D G3DSA:1.10.10.10 1 41 1.0E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_10320 24a9730f989d3804a9a27862533250b6 245 PIRSF PIRSF006325 4 245 4.0E-125 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 K04M3_10320 24a9730f989d3804a9a27862533250b6 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 1.5E-117 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 K04M3_10320 24a9730f989d3804a9a27862533250b6 245 Pfam PF13649 Methyltransferase domain 63 161 1.8E-13 T 12-10-2018 K04M3_10320 24a9730f989d3804a9a27862533250b6 245 Gene3D G3DSA:3.40.50.150 21 245 6.5E-65 T 12-10-2018 K04M3_10320 24a9730f989d3804a9a27862533250b6 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.388 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 K04M3_10320 24a9730f989d3804a9a27862533250b6 245 SUPERFAMILY SSF53335 23 245 4.8E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_49130 3e8bd55b2f6212229bf71036810d29e0 129 Pfam PF11012 Protein of unknown function (DUF2850) 21 99 3.8E-30 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 K04M3_23710 9f72293318ebba1c1011766dfa263e2c 130 Pfam PF07087 Protein of unknown function (DUF1353) 39 115 1.6E-9 T 12-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 12-10-2018 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 2.5E-67 T 12-10-2018 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 Gene3D G3DSA:3.40.50.1000 14 265 9.1E-74 T 12-10-2018 IPR023214 HAD superfamily K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 5.3E-34 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 Gene3D G3DSA:3.30.1240.10 91 195 9.1E-74 T 12-10-2018 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 12-10-2018 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 4.2E-60 T 12-10-2018 IPR000150 Cof family GO:0016787 K04M3_31190 1aa02ef690b69524dcd38112a2ed5e3e 274 SUPERFAMILY SSF56784 12 273 7.19E-67 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 Gene3D G3DSA:3.30.565.10 302 428 5.1E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 422 8.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 SUPERFAMILY SSF47384 210 291 8.44E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 SUPERFAMILY SSF55874 304 422 8.64E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 5.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 SMART SM00388 227 292 9.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 Gene3D G3DSA:1.10.287.130 177 293 7.3E-20 T 12-10-2018 K04M3_20460 e738f7d74bddf3630d90b0d48e23bca5 428 SMART SM00387 336 426 3.1E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_12200 d8c7c18032f68e3cda243ef68ce5f111 130 SUPERFAMILY SSF52540 23 97 1.65E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_12200 d8c7c18032f68e3cda243ef68ce5f111 130 Gene3D G3DSA:3.40.50.300 14 123 1.4E-10 T 12-10-2018 K04M3_12200 d8c7c18032f68e3cda243ef68ce5f111 130 Pfam PF03846 Cell division inhibitor SulA 17 96 2.2E-7 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 K04M3_06710 502c4c3f3fe34cd9bf609879d926bc61 207 Gene3D G3DSA:3.40.50.1820 13 202 3.8E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_06710 502c4c3f3fe34cd9bf609879d926bc61 207 SUPERFAMILY SSF53474 3 201 2.63E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_21300 81c67adc7cf18bbd5e8206e09bbae8ee 178 SUPERFAMILY SSF158442 17 163 1.18E-43 T 12-10-2018 IPR023380 DsbB-like superfamily K04M3_21300 81c67adc7cf18bbd5e8206e09bbae8ee 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.191 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB K04M3_21300 81c67adc7cf18bbd5e8206e09bbae8ee 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 4.4E-43 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 K04M3_21300 81c67adc7cf18bbd5e8206e09bbae8ee 178 Gene3D G3DSA:1.20.1550.10 3 176 9.1E-60 T 12-10-2018 IPR023380 DsbB-like superfamily K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 Gene3D G3DSA:1.10.150.20 36 87 1.5E-5 T 12-10-2018 K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 SUPERFAMILY SSF102712 134 192 5.89E-5 T 12-10-2018 K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 3.8E-77 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 Pfam PF04002 RadC-like JAB domain 104 222 4.7E-45 T 12-10-2018 IPR025657 RadC-like JAB domain K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 SUPERFAMILY SSF47781 17 91 4.13E-12 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 Gene3D G3DSA:3.40.140.10 102 224 2.9E-43 T 12-10-2018 K04M3_01680 3a6a181176a9744d867871106a3c95a6 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site K04M3_20520 e6952170e3dd757337ef6debd3a80431 342 Gene3D G3DSA:3.20.20.210 1 342 8.3E-137 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_20520 e6952170e3dd757337ef6debd3a80431 342 SUPERFAMILY SSF51726 3 339 2.62E-70 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 K04M3_20520 e6952170e3dd757337ef6debd3a80431 342 PIRSF PIRSF005632 1 342 1.1E-195 T 12-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit K04M3_20520 e6952170e3dd757337ef6debd3a80431 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.6E-37 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 K04M3_36890 cbb442df0c8197c73a6e02e539dbc2dc 121 Pfam PF01638 HxlR-like helix-turn-helix 31 116 4.4E-24 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type K04M3_36890 cbb442df0c8197c73a6e02e539dbc2dc 121 Gene3D G3DSA:1.10.10.10 5 121 5.8E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_36890 cbb442df0c8197c73a6e02e539dbc2dc 121 SUPERFAMILY SSF46785 17 119 6.99E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_04090 41230fe5d542f0639da0c18970f2cb68 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 K04M3_04090 41230fe5d542f0639da0c18970f2cb68 130 Gene3D G3DSA:3.30.230.10 1 130 8.9E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_04090 41230fe5d542f0639da0c18970f2cb68 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.8E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 K04M3_04090 41230fe5d542f0639da0c18970f2cb68 130 SUPERFAMILY SSF54211 5 130 2.77E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_04090 41230fe5d542f0639da0c18970f2cb68 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.853 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid K04M3_34260 008e5e479e47ec3263d0028141181005 236 Pfam PF00072 Response regulator receiver domain 7 116 1.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_34260 008e5e479e47ec3263d0028141181005 236 SUPERFAMILY SSF46894 154 231 2.15E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_34260 008e5e479e47ec3263d0028141181005 236 SMART SM00448 5 115 3.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_34260 008e5e479e47ec3263d0028141181005 236 SMART SM00862 156 231 2.7E-9 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_34260 008e5e479e47ec3263d0028141181005 236 Gene3D G3DSA:3.40.50.2300 1 123 1.3E-32 T 12-10-2018 K04M3_34260 008e5e479e47ec3263d0028141181005 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 1.5E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_34260 008e5e479e47ec3263d0028141181005 236 SUPERFAMILY SSF52172 4 126 4.98E-36 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_34260 008e5e479e47ec3263d0028141181005 236 Gene3D G3DSA:1.10.10.10 137 235 2.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20950 7b473a9c91ca8ecfb086451ecdc66604 383 Gene3D G3DSA:3.40.1090.10 16 119 3.1E-10 T 12-10-2018 K04M3_20950 7b473a9c91ca8ecfb086451ecdc66604 383 Gene3D G3DSA:3.40.1090.10 129 261 1.3E-6 T 12-10-2018 K04M3_20950 7b473a9c91ca8ecfb086451ecdc66604 383 SUPERFAMILY SSF52151 25 306 1.75E-35 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_20950 7b473a9c91ca8ecfb086451ecdc66604 383 Pfam PF01734 Patatin-like phospholipase 30 199 3.9E-20 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 K04M3_35520 79ef5a413cf34e50bd8e0b682f8bb4f9 261 Gene3D G3DSA:3.40.50.300 1 255 3.9E-62 T 12-10-2018 K04M3_35520 79ef5a413cf34e50bd8e0b682f8bb4f9 261 Pfam PF00005 ABC transporter 22 166 1.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_35520 79ef5a413cf34e50bd8e0b682f8bb4f9 261 SUPERFAMILY SSF52540 3 230 1.13E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35520 79ef5a413cf34e50bd8e0b682f8bb4f9 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_35520 79ef5a413cf34e50bd8e0b682f8bb4f9 261 SMART SM00382 26 214 1.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_23450 1120abc233d18780e09ee982aba25e17 180 SUPERFAMILY SSF56349 12 179 1.44E-31 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_23450 1120abc233d18780e09ee982aba25e17 180 Gene3D G3DSA:1.10.443.10 13 180 1.1E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 K04M3_23450 1120abc233d18780e09ee982aba25e17 180 Pfam PF00589 Phage integrase family 21 178 3.3E-14 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 K04M3_21530 e4f6d877f109fe8bae725f4ec1ad5524 298 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.7E-76 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 K04M3_21530 e4f6d877f109fe8bae725f4ec1ad5524 298 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 278 1.3E-102 T 12-10-2018 IPR010119 Gluconeogenesis factor K04M3_21530 e4f6d877f109fe8bae725f4ec1ad5524 298 Gene3D G3DSA:3.40.50.12300 5 297 1.9E-80 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily K04M3_21530 e4f6d877f109fe8bae725f4ec1ad5524 298 SUPERFAMILY SSF142338 6 290 4.45E-83 T 12-10-2018 K04M3_21530 e4f6d877f109fe8bae725f4ec1ad5524 298 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.749 T 12-10-2018 IPR010119 Gluconeogenesis factor K04M3_04610 ba9c1f7e3cf55513b8207635019a3eb7 160 Pfam PF03737 Aldolase/RraA 5 152 4.2E-42 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein K04M3_04610 ba9c1f7e3cf55513b8207635019a3eb7 160 SUPERFAMILY SSF89562 1 158 5.1E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily K04M3_04610 ba9c1f7e3cf55513b8207635019a3eb7 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.0E-68 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 K04M3_04610 ba9c1f7e3cf55513b8207635019a3eb7 160 Gene3D G3DSA:3.50.30.40 1 160 2.5E-64 T 12-10-2018 K04M3_12130 0a0bb8813c7725443c66a3e076f72d0a 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 K04M3_12130 0a0bb8813c7725443c66a3e076f72d0a 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 5.4E-112 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 K04M3_12130 0a0bb8813c7725443c66a3e076f72d0a 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 8.4E-58 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 K04M3_30880 35fe7c626b5988d86c048765590e0556 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 K04M3_30880 35fe7c626b5988d86c048765590e0556 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 114 2.2E-50 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 K04M3_43020 93435bf4e24231fcd9276f53622e38a7 537 Pfam PF08774 VRR-NUC domain 432 535 8.8E-24 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 K04M3_43020 93435bf4e24231fcd9276f53622e38a7 537 SMART SM00990 434 536 4.7E-23 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 K04M3_43020 93435bf4e24231fcd9276f53622e38a7 537 Gene3D G3DSA:3.40.1350.10 467 537 9.0E-10 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 K04M3_09550 2ed6416f628ce9c1d8662f33e000dc32 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 3.0E-111 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 K04M3_09550 2ed6416f628ce9c1d8662f33e000dc32 252 Pfam PF01048 Phosphorylase superfamily 20 244 4.4E-40 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 K04M3_09550 2ed6416f628ce9c1d8662f33e000dc32 252 Gene3D G3DSA:3.40.50.1580 1 252 3.0E-81 T 12-10-2018 K04M3_09550 2ed6416f628ce9c1d8662f33e000dc32 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 K04M3_09550 2ed6416f628ce9c1d8662f33e000dc32 252 SUPERFAMILY SSF53167 4 251 1.7E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 K04M3_15670 c8aa3975a33ebe9c13da7a45d5e9a80c 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.5E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 K04M3_15670 c8aa3975a33ebe9c13da7a45d5e9a80c 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.5E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 K04M3_15670 c8aa3975a33ebe9c13da7a45d5e9a80c 139 SUPERFAMILY SSF55811 7 124 2.3E-22 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_15670 c8aa3975a33ebe9c13da7a45d5e9a80c 139 Gene3D G3DSA:3.90.79.10 3 135 3.8E-22 T 12-10-2018 K04M3_15670 c8aa3975a33ebe9c13da7a45d5e9a80c 139 Pfam PF00293 NUDIX domain 6 127 5.6E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_13470 132ca029fc4682f70fddde7b90dc1f12 219 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 9.1E-34 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 K04M3_13470 132ca029fc4682f70fddde7b90dc1f12 219 PIRSF PIRSF028063 1 219 4.5E-140 T 12-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger K04M3_47600 82ad374ba791464567370b145b0d4837 239 Gene3D G3DSA:3.10.200.10 22 238 1.8E-81 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily K04M3_47600 82ad374ba791464567370b145b0d4837 239 SMART SM01057 23 239 5.8E-94 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain K04M3_47600 82ad374ba791464567370b145b0d4837 239 SUPERFAMILY SSF51069 22 237 1.96E-74 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily K04M3_47600 82ad374ba791464567370b145b0d4837 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 238 2.7E-50 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain K04M3_47600 82ad374ba791464567370b145b0d4837 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 K04M3_27890 8ed78f828348718e1c3dd6465c064bc8 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.9E-44 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 K04M3_27890 8ed78f828348718e1c3dd6465c064bc8 241 SMART SM00563 67 182 5.5E-41 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_27890 8ed78f828348718e1c3dd6465c064bc8 241 Pfam PF01553 Acyltransferase 58 180 3.8E-32 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_27890 8ed78f828348718e1c3dd6465c064bc8 241 SUPERFAMILY SSF69593 4 235 1.18E-57 T 12-10-2018 K04M3_00740 855a04d7dcf7e930843921df4d388b68 143 Pfam PF01814 Hemerythrin HHE cation binding domain 4 121 4.2E-12 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 K04M3_00740 855a04d7dcf7e930843921df4d388b68 143 Gene3D G3DSA:1.20.120.520 1 138 1.0E-8 T 12-10-2018 K04M3_41840 db514767a5c34329eb1d8dbefb882332 262 Gene3D G3DSA:3.30.2010.10 53 139 1.9E-7 T 12-10-2018 K04M3_41840 db514767a5c34329eb1d8dbefb882332 262 Pfam PF01435 Peptidase family M48 60 246 2.9E-46 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 9.1E-79 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 SUPERFAMILY SSF51412 6 336 4.58E-98 T 12-10-2018 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.5E-185 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 PIRSF PIRSF000235 1 347 3.6E-195 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 Gene3D G3DSA:3.20.20.70 1 345 1.3E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.103 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 K04M3_44730 720ae35d0761863f6239a7569ea30804 347 SMART SM01240 7 344 9.4E-135 T 12-10-2018 K04M3_03430 8aca75c5a4dce67a0723434b40d31a53 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 753 20.126 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 K04M3_03430 8aca75c5a4dce67a0723434b40d31a53 781 Pfam PF04453 Organic solvent tolerance protein 297 682 5.1E-113 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 K04M3_03430 8aca75c5a4dce67a0723434b40d31a53 781 Pfam PF03968 OstA-like protein 58 189 9.9E-17 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal K04M3_03430 8aca75c5a4dce67a0723434b40d31a53 781 Gene3D G3DSA:2.60.450.10 49 98 3.2E-6 T 12-10-2018 K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 Gene3D G3DSA:3.30.428.10 1 111 1.3E-35 T 12-10-2018 IPR036265 HIT-like superfamily K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 Pfam PF01230 HIT domain 12 109 2.0E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 PRINTS PR00332 Histidine triad family signature 6 22 5.2E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 PRINTS PR00332 Histidine triad family signature 95 105 5.2E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 PRINTS PR00332 Histidine triad family signature 27 45 5.2E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 12-10-2018 IPR019808 Histidine triad, conserved site K04M3_09580 fa835d9367ae309cca93dfe9365d8486 116 SUPERFAMILY SSF54197 2 112 5.26E-35 T 12-10-2018 IPR036265 HIT-like superfamily K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 1.2E-266 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 SUPERFAMILY SSF53901 296 434 1.33E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 8.6E-127 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 SUPERFAMILY SSF53901 14 293 1.28E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 Gene3D G3DSA:3.40.47.10 4 434 4.9E-110 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 PIRSF PIRSF000429 8 435 1.5E-119 T 12-10-2018 IPR002155 Thiolase GO:0016747 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 9.1E-64 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 8.6E-36 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 K04M3_22460 968dd07767895d2617f5beb39d70b04a 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 K04M3_46920 15ac172b6572a2209710a0a776d45d2b 470 Gene3D G3DSA:3.20.20.70 144 453 2.0E-144 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_46920 15ac172b6572a2209710a0a776d45d2b 470 Gene3D G3DSA:2.30.170.30 3 56 4.6E-21 T 12-10-2018 K04M3_46920 15ac172b6572a2209710a0a776d45d2b 470 PIRSF PIRSF018788 3 461 5.9E-234 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 K04M3_46920 15ac172b6572a2209710a0a776d45d2b 470 Gene3D G3DSA:1.10.220.70 57 143 1.6E-35 T 12-10-2018 K04M3_46920 15ac172b6572a2209710a0a776d45d2b 470 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 443 6.9E-220 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 K04M3_13250 9c65b02e802017f3ea91d1a796e8a2c8 510 Gene3D G3DSA:3.40.309.10 256 441 1.3E-208 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 K04M3_13250 9c65b02e802017f3ea91d1a796e8a2c8 510 Pfam PF00171 Aldehyde dehydrogenase family 7 453 7.4E-47 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 K04M3_13250 9c65b02e802017f3ea91d1a796e8a2c8 510 Gene3D G3DSA:3.40.605.10 31 506 1.3E-208 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 K04M3_13250 9c65b02e802017f3ea91d1a796e8a2c8 510 SUPERFAMILY SSF53720 7 503 4.71E-100 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 1.4E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 Pfam PF00072 Response regulator receiver domain 4 112 5.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 SUPERFAMILY SSF46894 123 222 4.54E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 SMART SM00448 2 113 1.6E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 Gene3D G3DSA:1.10.10.10 126 224 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 Gene3D G3DSA:3.40.50.2300 1 122 2.2E-34 T 12-10-2018 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 SMART SM00862 147 221 7.6E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_20450 305e1892a7e0ed46726cb281f9a40d38 225 SUPERFAMILY SSF52172 1 124 3.98E-39 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 9.0E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 9.0E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 9.0E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 9.0E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 9.0E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 Pfam PF02107 Flagellar L-ring protein 80 257 5.3E-57 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_07740 d47bf619b8236535141001ef5401a0b0 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.695 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 K04M3_16640 48be9620e3f2da96194f9e9f9a671a6a 436 Gene3D G3DSA:1.20.1600.10 22 427 2.2E-83 T 12-10-2018 K04M3_16640 48be9620e3f2da96194f9e9f9a671a6a 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 3.9E-121 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 K04M3_16640 48be9620e3f2da96194f9e9f9a671a6a 436 Pfam PF02321 Outer membrane efflux protein 24 210 6.5E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_16640 48be9620e3f2da96194f9e9f9a671a6a 436 Pfam PF02321 Outer membrane efflux protein 233 416 4.6E-30 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_16640 48be9620e3f2da96194f9e9f9a671a6a 436 SUPERFAMILY SSF56954 23 430 1.83E-87 T 12-10-2018 K04M3_34120 7add6c46aee418f524c61d50ca45ade4 148 Pfam PF06271 RDD family 6 141 1.5E-17 T 12-10-2018 IPR010432 RDD K04M3_20890 4d0daad8950a097556a5be8824d0910c 232 Gene3D G3DSA:3.40.50.300 52 159 1.0E-28 T 12-10-2018 K04M3_20890 4d0daad8950a097556a5be8824d0910c 232 Pfam PF00154 recA bacterial DNA recombination protein 28 125 9.9E-6 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 K04M3_20890 4d0daad8950a097556a5be8824d0910c 232 SUPERFAMILY SSF52540 56 158 7.59E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_20890 4d0daad8950a097556a5be8824d0910c 232 PIRSF PIRSF037290 1 232 1.2E-69 T 12-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 K04M3_35860 0bd096dcaccdec8dda6baeb304d539b0 726 Pfam PF02706 Chain length determinant protein 23 107 1.3E-9 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 K04M3_35860 0bd096dcaccdec8dda6baeb304d539b0 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 718 8.1E-43 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 K04M3_35860 0bd096dcaccdec8dda6baeb304d539b0 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 396 467 2.6E-10 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain K04M3_35860 0bd096dcaccdec8dda6baeb304d539b0 726 Pfam PF13614 AAA domain 552 676 3.9E-14 T 12-10-2018 IPR025669 AAA domain K04M3_35860 0bd096dcaccdec8dda6baeb304d539b0 726 SUPERFAMILY SSF52540 540 716 5.6E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_35860 0bd096dcaccdec8dda6baeb304d539b0 726 Gene3D G3DSA:3.40.50.300 464 726 2.7E-65 T 12-10-2018 K04M3_09850 1522dd6909acddeb66401705916e290d 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 5.6E-207 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 K04M3_09850 1522dd6909acddeb66401705916e290d 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 K04M3_09850 1522dd6909acddeb66401705916e290d 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 12-10-2018 K04M3_09850 1522dd6909acddeb66401705916e290d 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site K04M3_09850 1522dd6909acddeb66401705916e290d 758 SUPERFAMILY SSF51998 4 757 2.08E-290 T 12-10-2018 K04M3_09850 1522dd6909acddeb66401705916e290d 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 K04M3_09850 1522dd6909acddeb66401705916e290d 758 PIRSF PIRSF000379 5 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 K04M3_10430 0d9e7cece26bc7f54fde05994bf2f35b 99 Gene3D G3DSA:3.10.129.10 1 96 7.6E-22 T 12-10-2018 K04M3_10430 0d9e7cece26bc7f54fde05994bf2f35b 99 PIRSF PIRSF003230 1 98 1.2E-23 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 K04M3_10430 0d9e7cece26bc7f54fde05994bf2f35b 99 Pfam PF03061 Thioesterase superfamily 10 66 3.8E-10 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 K04M3_10430 0d9e7cece26bc7f54fde05994bf2f35b 99 SUPERFAMILY SSF54637 2 93 5.61E-22 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_20170 0641307743f86b0908a2bc81d22afd89 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 2.0E-7 T 12-10-2018 IPR012639 Tryptophan operon leader peptide K04M3_20170 0641307743f86b0908a2bc81d22afd89 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 5.3E-30 T 12-10-2018 IPR012639 Tryptophan operon leader peptide K04M3_03500 56b0f52efda80b9673dd262bd6eebb28 265 Gene3D G3DSA:2.30.30.40 126 191 1.2E-10 T 12-10-2018 K04M3_03500 56b0f52efda80b9673dd262bd6eebb28 265 Pfam PF08239 Bacterial SH3 domain 132 183 1.5E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type K04M3_16450 a754781fac2b8465bfce5c24ea30ec9d 165 SUPERFAMILY SSF54637 12 157 8.21E-16 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_16450 a754781fac2b8465bfce5c24ea30ec9d 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 2.8E-10 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 K04M3_16450 a754781fac2b8465bfce5c24ea30ec9d 165 Gene3D G3DSA:3.10.129.10 6 154 1.2E-25 T 12-10-2018 K04M3_47240 973adb797453b63b71194db536c04c45 172 Pfam PF00293 NUDIX domain 23 145 1.4E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_47240 973adb797453b63b71194db536c04c45 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_47240 973adb797453b63b71194db536c04c45 172 Gene3D G3DSA:3.90.79.10 13 151 7.6E-26 T 12-10-2018 K04M3_47240 973adb797453b63b71194db536c04c45 172 SUPERFAMILY SSF55811 9 143 6.77E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_07680 ab9dabd4ef0c0f2716fa4da5b75a89bb 131 PIRSF PIRSF002889 1 131 1.0E-31 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 K04M3_07680 ab9dabd4ef0c0f2716fa4da5b75a89bb 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 6.0E-28 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 Gene3D G3DSA:3.90.1310.30 83 258 7.6E-46 T 12-10-2018 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 Gene3D G3DSA:3.30.450.330 260 584 5.4E-105 T 12-10-2018 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 2.5E-20 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 43 595 44.836 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 SUPERFAMILY SSF56519 87 258 8.24E-46 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 Gene3D G3DSA:3.40.710.10 320 502 5.4E-105 T 12-10-2018 K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 SUPERFAMILY SSF56601 259 588 5.8E-91 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like K04M3_04240 49300cdbde40c330897d1e48378a5d20 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 1.2E-76 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 K04M3_31070 5d5a577a9f45aabd547affc6b2749453 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 1.5E-23 T 12-10-2018 IPR019620 Putative metal-binding protein K04M3_31070 5d5a577a9f45aabd547affc6b2749453 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.0E-24 T 12-10-2018 IPR019620 Putative metal-binding protein K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 Pfam PF00480 ROK family 86 390 2.2E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 Gene3D G3DSA:3.30.420.40 207 376 1.9E-93 T 12-10-2018 K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 SUPERFAMILY SSF53067 85 391 2.38E-55 T 12-10-2018 K04M3_08240 3df23ea6238c87b7acfb5a25bf9840ac 404 Gene3D G3DSA:3.30.420.40 90 384 1.9E-93 T 12-10-2018 K04M3_49460 703b3c9e416ce43e730163a774b1590b 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 254 1.4E-36 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein K04M3_49460 703b3c9e416ce43e730163a774b1590b 261 Gene3D G3DSA:2.50.20.10 28 255 1.5E-39 T 12-10-2018 K04M3_49460 703b3c9e416ce43e730163a774b1590b 261 PIRSF PIRSF028205 1 258 8.7E-115 T 12-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 K04M3_05960 1792db5f03df6c7a6407bf0eda41febb 337 Pfam PF04796 Plasmid encoded RepA protein 95 270 1.7E-30 T 12-10-2018 IPR006881 Plasmid encoded RepA protein K04M3_29820 ccc245a6f3cc53fbae4f717d6840f9d4 211 Gene3D G3DSA:1.10.357.10 1 209 2.8E-64 T 12-10-2018 K04M3_29820 ccc245a6f3cc53fbae4f717d6840f9d4 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_29820 ccc245a6f3cc53fbae4f717d6840f9d4 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_29820 ccc245a6f3cc53fbae4f717d6840f9d4 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_29820 ccc245a6f3cc53fbae4f717d6840f9d4 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 8.8E-44 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR K04M3_29820 ccc245a6f3cc53fbae4f717d6840f9d4 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 SUPERFAMILY SSF161070 10 457 8.37E-129 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 8.0E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 8.0E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 8.0E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 8.0E-13 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 2.0E-32 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 2.5E-22 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_11560 3112868d59e58ae33b28f2141b7d390e 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_42800 cba2050276a5513083fd07c3a03aec79 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 445 3.8E-27 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_42800 cba2050276a5513083fd07c3a03aec79 454 SUPERFAMILY SSF56219 32 450 1.67E-13 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 4.3E-194 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 2.0E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 3.1E-174 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 Gene3D G3DSA:3.40.50.12240 17 439 3.2E-156 T 12-10-2018 K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 SMART SM00382 158 342 6.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_22850 d9d05bea66485f1eeeaa7e1035890ea6 439 SUPERFAMILY SSF52540 93 362 2.29E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_10820 fd8a32813b4f78cddaeab87f7e1f9530 208 SUPERFAMILY SSF89392 30 207 1.61E-51 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX K04M3_10820 fd8a32813b4f78cddaeab87f7e1f9530 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 32.097 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 K04M3_10820 fd8a32813b4f78cddaeab87f7e1f9530 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 196 1.6E-55 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like K04M3_10820 fd8a32813b4f78cddaeab87f7e1f9530 208 Gene3D G3DSA:2.50.20.10 26 207 8.4E-47 T 12-10-2018 K04M3_10820 fd8a32813b4f78cddaeab87f7e1f9530 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 1.6E-63 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 K04M3_31560 c2e6261ea8dc379f8ffe43c15fb3f4d4 219 PIRSF PIRSF006324 1 214 4.8E-47 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_31560 c2e6261ea8dc379f8ffe43c15fb3f4d4 219 Pfam PF01810 LysE type translocator 16 212 2.7E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_30100 96a99443bda0f408b32bc026502cbf68 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.3E-33 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted K04M3_30100 96a99443bda0f408b32bc026502cbf68 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.8E-35 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 SUPERFAMILY SSF51120 3553 3994 7.85E-7 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 Gene3D G3DSA:2.60.40.10 1387 1490 1.8E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 Gene3D G3DSA:2.60.40.10 1184 1282 1.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 Gene3D G3DSA:2.60.40.10 339 440 5.7E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 Gene3D G3DSA:2.60.40.10 238 336 1.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 Gene3D G3DSA:2.60.40.10 441 544 1.8E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_14790 576f597b01d35e7f31056bef9c803ddb 4050 Gene3D G3DSA:2.60.40.10 1285 1386 5.7E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_09770 f61ef50cb5f4f4c5f34d63e0241585d0 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.489 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 K04M3_09770 f61ef50cb5f4f4c5f34d63e0241585d0 251 Pfam PF02348 Cytidylyltransferase 5 221 1.4E-66 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 K04M3_09770 f61ef50cb5f4f4c5f34d63e0241585d0 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.3E-119 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 K04M3_09770 f61ef50cb5f4f4c5f34d63e0241585d0 251 Gene3D G3DSA:3.90.550.10 1 251 1.1E-97 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_09770 f61ef50cb5f4f4c5f34d63e0241585d0 251 SUPERFAMILY SSF53448 1 249 5.16E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_32790 5f81e9d43fb45ff5b9d6690541551153 333 PIRSF PIRSF028188 7 329 8.6E-156 T 12-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type K04M3_32790 5f81e9d43fb45ff5b9d6690541551153 333 Pfam PF02274 Amidinotransferase 31 326 2.9E-63 T 12-10-2018 K04M3_32790 5f81e9d43fb45ff5b9d6690541551153 333 Gene3D G3DSA:3.75.10.10 26 321 1.9E-44 T 12-10-2018 K04M3_32790 5f81e9d43fb45ff5b9d6690541551153 333 SUPERFAMILY SSF55909 27 321 1.79E-38 T 12-10-2018 K04M3_14830 56a1bce36fc3bba50fc523c093d8906d 206 SUPERFAMILY SSF103088 48 150 1.22E-14 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_14830 56a1bce36fc3bba50fc523c093d8906d 206 Gene3D G3DSA:3.30.1330.60 64 175 1.8E-12 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_14830 56a1bce36fc3bba50fc523c093d8906d 206 Pfam PF00691 OmpA family 77 159 2.7E-10 T 12-10-2018 IPR006665 OmpA-like domain K04M3_06510 e5a7ceae8b07e08cda9e808a6667544b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.91 T 12-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 K04M3_06510 e5a7ceae8b07e08cda9e808a6667544b 154 Gene3D G3DSA:3.40.50.2020 1 152 1.7E-41 T 12-10-2018 K04M3_06510 e5a7ceae8b07e08cda9e808a6667544b 154 SUPERFAMILY SSF53271 5 146 8.95E-28 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like K04M3_06510 e5a7ceae8b07e08cda9e808a6667544b 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 2.3E-13 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 K04M3_23310 c10401c72d8fcb0fa6632421daf199d1 569 SUPERFAMILY SSF52540 4 335 1.65E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_23310 c10401c72d8fcb0fa6632421daf199d1 569 Gene3D G3DSA:3.40.50.300 3 337 1.1E-23 T 12-10-2018 K04M3_23310 c10401c72d8fcb0fa6632421daf199d1 569 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 249 321 2.0E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_23310 c10401c72d8fcb0fa6632421daf199d1 569 Pfam PF13476 AAA domain 7 69 1.1E-9 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 8.8E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 SUPERFAMILY SSF50891 1 162 5.99E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 2.1E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 Gene3D G3DSA:2.40.100.10 1 164 2.0E-66 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_11210 8d15827324cd84f6d7317ac78ced8826 164 PIRSF PIRSF001467 1 163 2.5E-28 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 K04M3_16980 859d74538defa0b79abd9d064d28c928 222 Pfam PF13394 4Fe-4S single cluster domain 23 129 5.6E-11 T 12-10-2018 K04M3_16980 859d74538defa0b79abd9d064d28c928 222 Gene3D G3DSA:3.20.20.70 1 222 1.0E-53 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_16980 859d74538defa0b79abd9d064d28c928 222 SUPERFAMILY SSF102114 27 117 1.7E-5 T 12-10-2018 K04M3_16980 859d74538defa0b79abd9d064d28c928 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 1.8E-111 T 12-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 K04M3_16980 859d74538defa0b79abd9d064d28c928 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.296 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 K04M3_16980 859d74538defa0b79abd9d064d28c928 222 PIRSF PIRSF000370 1 222 3.9E-70 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 K04M3_39040 c8aeda9995fcce03753f926f4c544ff2 264 Gene3D G3DSA:3.60.40.10 1 241 4.1E-59 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_39040 c8aeda9995fcce03753f926f4c544ff2 264 SUPERFAMILY SSF81606 8 237 8.24E-61 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_39040 c8aeda9995fcce03753f926f4c544ff2 264 SMART SM00332 1 235 9.9E-19 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_39040 c8aeda9995fcce03753f926f4c544ff2 264 Pfam PF13672 Protein phosphatase 2C 19 211 4.8E-22 T 12-10-2018 K04M3_39040 c8aeda9995fcce03753f926f4c544ff2 264 SMART SM00331 11 237 9.5E-23 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_35230 7e7df0515c7342fe58733d60e8f89b94 84 Gene3D G3DSA:1.20.5.190 28 83 5.5E-13 T 12-10-2018 K04M3_35230 7e7df0515c7342fe58733d60e8f89b94 84 Pfam PF04728 Lipoprotein leucine-zipper 32 84 1.5E-24 T 12-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 K04M3_35230 7e7df0515c7342fe58733d60e8f89b94 84 PIRSF PIRSF002855 1 84 1.2E-31 T 12-10-2018 IPR016367 Murein-lipoprotein K04M3_35230 7e7df0515c7342fe58733d60e8f89b94 84 SUPERFAMILY SSF58042 29 83 2.22E-16 T 12-10-2018 K04M3_29510 01391a1b45ec0206ef67ae34c1136525 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 K04M3_29510 01391a1b45ec0206ef67ae34c1136525 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 K04M3_29510 01391a1b45ec0206ef67ae34c1136525 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 12-10-2018 K04M3_29510 01391a1b45ec0206ef67ae34c1136525 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 K04M3_29510 01391a1b45ec0206ef67ae34c1136525 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_18120 dddbb6a2c17f7d87a24036d54e5739e2 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 2.4E-23 T 12-10-2018 K04M3_18120 dddbb6a2c17f7d87a24036d54e5739e2 169 SUPERFAMILY SSF55729 2 162 1.67E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_18120 dddbb6a2c17f7d87a24036d54e5739e2 169 Gene3D G3DSA:3.40.630.30 2 166 4.6E-42 T 12-10-2018 K04M3_00460 7dfea73acb0d476928e02e1308b03b82 316 SUPERFAMILY SSF161098 97 298 4.84E-25 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_00460 7dfea73acb0d476928e02e1308b03b82 316 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 73 2.6E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain K04M3_00460 7dfea73acb0d476928e02e1308b03b82 316 Gene3D G3DSA:1.10.3720.10 90 310 8.3E-25 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_00460 7dfea73acb0d476928e02e1308b03b82 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 313 2.8E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_09790 e27bcaafe8df1afb7583e44f729d7043 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.658 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 K04M3_09790 e27bcaafe8df1afb7583e44f729d7043 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 2.7E-188 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 K04M3_41660 94d9100573143cf4ae5dc46c8172456c 229 SUPERFAMILY SSF88713 1 227 5.26E-81 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 K04M3_41660 94d9100573143cf4ae5dc46c8172456c 229 Pfam PF03746 LamB/YcsF family 1 224 3.2E-84 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 K04M3_41660 94d9100573143cf4ae5dc46c8172456c 229 Gene3D G3DSA:3.20.20.370 1 229 3.5E-87 T 12-10-2018 K04M3_37460 f8783a37784339cb4b9a2478b6d7f437 743 Pfam PF00072 Response regulator receiver domain 620 734 7.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_37460 f8783a37784339cb4b9a2478b6d7f437 743 SUPERFAMILY SSF52172 616 737 3.13E-30 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_37460 f8783a37784339cb4b9a2478b6d7f437 743 SMART SM00448 617 733 2.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_37460 f8783a37784339cb4b9a2478b6d7f437 743 Gene3D G3DSA:3.40.50.2300 603 741 5.0E-34 T 12-10-2018 K04M3_25990 b85e69e8b1870908f2487c9e33cf9f9d 337 PIRSF PIRSF002825 1 337 1.7E-102 T 12-10-2018 IPR026045 Ferric binding protein K04M3_25990 b85e69e8b1870908f2487c9e33cf9f9d 337 SUPERFAMILY SSF53850 24 332 1.63E-76 T 12-10-2018 K04M3_25990 b85e69e8b1870908f2487c9e33cf9f9d 337 Gene3D G3DSA:3.40.190.10 120 328 6.7E-127 T 12-10-2018 K04M3_25990 b85e69e8b1870908f2487c9e33cf9f9d 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 1.5E-20 T 12-10-2018 K04M3_25990 b85e69e8b1870908f2487c9e33cf9f9d 337 Gene3D G3DSA:3.40.190.10 25 297 6.7E-127 T 12-10-2018 K04M3_31680 25fc6ec16d4694d45bb1e30ecc8b689a 255 SUPERFAMILY SSF110399 1 236 5.75E-85 T 12-10-2018 K04M3_31680 25fc6ec16d4694d45bb1e30ecc8b689a 255 Gene3D G3DSA:3.20.20.70 1 253 4.0E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_31680 25fc6ec16d4694d45bb1e30ecc8b689a 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.24 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 K04M3_31680 25fc6ec16d4694d45bb1e30ecc8b689a 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 5.8E-110 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 K04M3_23300 036d6e2d0f942ace412bc0ee1964380b 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 59 79 1.9E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_23300 036d6e2d0f942ace412bc0ee1964380b 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 42 59 1.9E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_23300 036d6e2d0f942ace412bc0ee1964380b 89 SUPERFAMILY SSF46689 26 75 6.57E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_23300 036d6e2d0f942ace412bc0ee1964380b 89 Pfam PF02954 Bacterial regulatory protein, Fis family 43 75 4.8E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 K04M3_23300 036d6e2d0f942ace412bc0ee1964380b 89 Gene3D G3DSA:1.10.10.60 4 77 5.5E-9 T 12-10-2018 K04M3_08880 05ad01f24d8a9e0759c7513503d64861 466 SUPERFAMILY SSF56801 17 465 1.7E-56 T 12-10-2018 K04M3_08880 05ad01f24d8a9e0759c7513503d64861 466 Gene3D G3DSA:3.30.300.30 357 463 2.8E-16 T 12-10-2018 K04M3_08880 05ad01f24d8a9e0759c7513503d64861 466 Pfam PF00501 AMP-binding enzyme 22 317 2.1E-18 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_08880 05ad01f24d8a9e0759c7513503d64861 466 Pfam PF13193 AMP-binding enzyme C-terminal domain 372 455 7.7E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain K04M3_08880 05ad01f24d8a9e0759c7513503d64861 466 Gene3D G3DSA:3.40.50.12780 10 329 3.5E-25 T 12-10-2018 K04M3_47090 b1dfe90a849914573cb0a7f958484afb 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 182 5.3E-56 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 K04M3_47090 b1dfe90a849914573cb0a7f958484afb 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 2.5E-16 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_47090 b1dfe90a849914573cb0a7f958484afb 299 SUPERFAMILY SSF64518 1 299 8.24E-55 T 12-10-2018 K04M3_00090 492806e16f74f69a334500b31b677555 694 PIRSF PIRSF036917 1 694 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 K04M3_00090 492806e16f74f69a334500b31b677555 694 Gene3D G3DSA:3.20.20.80 189 437 1.3E-41 T 12-10-2018 K04M3_00090 492806e16f74f69a334500b31b677555 694 Gene3D G3DSA:3.20.20.80 438 664 2.2E-37 T 12-10-2018 K04M3_00090 492806e16f74f69a334500b31b677555 694 SMART SM00642 203 656 7.6E-76 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_00090 492806e16f74f69a334500b31b677555 694 SUPERFAMILY SSF51445 190 665 2.62E-78 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_00090 492806e16f74f69a334500b31b677555 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 6.7E-38 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 K04M3_52060 2d54075c6dc300c1d1f3d783970d7b4a 467 Gene3D G3DSA:3.90.120.10 322 415 6.9E-27 T 12-10-2018 K04M3_52060 2d54075c6dc300c1d1f3d783970d7b4a 467 SUPERFAMILY SSF53335 133 449 2.99E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_52060 2d54075c6dc300c1d1f3d783970d7b4a 467 Pfam PF00145 C-5 cytosine-specific DNA methylase 135 449 4.1E-19 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_52060 2d54075c6dc300c1d1f3d783970d7b4a 467 Gene3D G3DSA:3.40.50.150 135 439 6.9E-27 T 12-10-2018 K04M3_33330 1ce38b8474f8b0785ba2cf4d3f295698 214 SUPERFAMILY SSF55961 20 204 1.04E-43 T 12-10-2018 K04M3_33330 1ce38b8474f8b0785ba2cf4d3f295698 214 PIRSF PIRSF039033 4 214 1.5E-55 T 12-10-2018 IPR028347 START domain-containing protein K04M3_33330 1ce38b8474f8b0785ba2cf4d3f295698 214 Gene3D G3DSA:3.30.530.20 25 211 1.9E-55 T 12-10-2018 IPR023393 START-like domain superfamily K04M3_33330 1ce38b8474f8b0785ba2cf4d3f295698 214 Pfam PF01852 START domain 23 199 4.2E-6 T 12-10-2018 IPR002913 START domain GO:0008289 K04M3_39220 03d7375f9cb046cb32e56b1e11e96bd1 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 8.9E-71 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_39220 03d7375f9cb046cb32e56b1e11e96bd1 331 PIRSF PIRSF039012 9 331 3.4E-95 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_39220 03d7375f9cb046cb32e56b1e11e96bd1 331 SUPERFAMILY SSF53187 38 330 3.64E-50 T 12-10-2018 K04M3_39220 03d7375f9cb046cb32e56b1e11e96bd1 331 Gene3D G3DSA:3.40.630.10 15 329 2.2E-73 T 12-10-2018 K04M3_31710 89321feebf59628f7bcbe25a459fad8c 471 Gene3D G3DSA:3.20.20.70 220 451 1.0E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_31710 89321feebf59628f7bcbe25a459fad8c 471 SUPERFAMILY SSF51391 227 447 2.09E-57 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_31710 89321feebf59628f7bcbe25a459fad8c 471 Pfam PF02581 Thiamine monophosphate synthase 236 429 1.1E-49 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 K04M3_05390 a63a6d049d09c7b793293deaf641823d 278 PIRSF PIRSF018455 3 278 7.6E-109 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 K04M3_05390 a63a6d049d09c7b793293deaf641823d 278 SUPERFAMILY SSF55166 20 277 5.1E-93 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_05390 a63a6d049d09c7b793293deaf641823d 278 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 275 1.8E-91 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 K04M3_05390 a63a6d049d09c7b793293deaf641823d 278 Gene3D G3DSA:3.30.1380.10 19 278 3.3E-94 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_37810 6750e3bbc55674ba441f8a74f096bb34 328 SMART SM00833 241 324 5.0E-4 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal K04M3_37810 6750e3bbc55674ba441f8a74f096bb34 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 2.3E-42 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain K04M3_37810 6750e3bbc55674ba441f8a74f096bb34 328 SUPERFAMILY SSF52540 4 171 1.07E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37810 6750e3bbc55674ba441f8a74f096bb34 328 Gene3D G3DSA:3.40.50.300 2 197 2.6E-45 T 12-10-2018 K04M3_35960 2f31aeb6d8f435ee9ca68549d9c2c83f 301 SUPERFAMILY SSF103481 187 282 2.22E-10 T 12-10-2018 K04M3_35960 2f31aeb6d8f435ee9ca68549d9c2c83f 301 SUPERFAMILY SSF103481 35 138 2.48E-11 T 12-10-2018 K04M3_35960 2f31aeb6d8f435ee9ca68549d9c2c83f 301 Pfam PF00892 EamA-like transporter family 151 280 6.7E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_35960 2f31aeb6d8f435ee9ca68549d9c2c83f 301 Pfam PF00892 EamA-like transporter family 3 135 9.1E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_32880 aeb5834f1efb92b9a3db2ea2ddb91691 179 Gene3D G3DSA:3.40.33.10 19 177 9.1E-44 T 12-10-2018 IPR035940 CAP superfamily K04M3_32880 aeb5834f1efb92b9a3db2ea2ddb91691 179 SUPERFAMILY SSF55797 42 176 7.59E-21 T 12-10-2018 IPR035940 CAP superfamily K04M3_32880 aeb5834f1efb92b9a3db2ea2ddb91691 179 Pfam PF00188 Cysteine-rich secretory protein family 48 175 6.0E-19 T 12-10-2018 IPR014044 CAP domain K04M3_18130 195b5e24bdd68ac0e29833e30ee76c6c 160 SUPERFAMILY SSF81301 1 155 4.33E-38 T 12-10-2018 K04M3_18130 195b5e24bdd68ac0e29833e30ee76c6c 160 Gene3D G3DSA:3.30.460.40 1 156 1.4E-28 T 12-10-2018 K04M3_06290 ce423b9eb59f8e972f6b5f0c53c56f3c 294 Gene3D G3DSA:3.40.50.10330 23 289 1.5E-94 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 K04M3_06290 ce423b9eb59f8e972f6b5f0c53c56f3c 294 Gene3D G3DSA:2.60.200.30 129 266 1.5E-94 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 K04M3_06290 ce423b9eb59f8e972f6b5f0c53c56f3c 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.551 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 K04M3_06290 ce423b9eb59f8e972f6b5f0c53c56f3c 294 SUPERFAMILY SSF111331 8 290 1.57E-93 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily K04M3_06290 ce423b9eb59f8e972f6b5f0c53c56f3c 294 Pfam PF01513 ATP-NAD kinase 8 273 1.1E-71 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 K04M3_12220 00ead43c3c89b374fbad6e1735f91b87 324 Gene3D G3DSA:1.10.287.110 257 324 1.3E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_12220 00ead43c3c89b374fbad6e1735f91b87 324 SUPERFAMILY SSF46565 268 321 3.66E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily K04M3_12220 00ead43c3c89b374fbad6e1735f91b87 324 Gene3D G3DSA:1.25.40.10 12 187 7.7E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_12220 00ead43c3c89b374fbad6e1735f91b87 324 SUPERFAMILY SSF81901 42 143 9.81E-9 T 12-10-2018 K04M3_52700 6cd727030204e18f41d0078866ff7dfc 813 Pfam PF07804 HipA-like C-terminal domain 589 754 2.1E-20 T 12-10-2018 IPR012893 HipA-like, C-terminal K04M3_43030 06f4a2dcd6777c215878ff143d3ecfad 215 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 147 215 4.0E-4 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 K04M3_43030 06f4a2dcd6777c215878ff143d3ecfad 215 SUPERFAMILY SSF56925 20 215 2.3E-22 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_43030 06f4a2dcd6777c215878ff143d3ecfad 215 Gene3D G3DSA:2.40.160.20 17 215 1.0E-21 T 12-10-2018 K04M3_43030 06f4a2dcd6777c215878ff143d3ecfad 215 Pfam PF13505 Outer membrane protein beta-barrel domain 5 215 1.0E-16 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_31610 6ba8b062ead5af8ccff71ba949be3172 252 Pfam PF09836 Putative DNA-binding domain 6 94 1.5E-22 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria K04M3_12410 7e683f6eface63618f4f99cebb6bb589 269 Gene3D G3DSA:1.10.260.40 2 68 6.6E-6 T 12-10-2018 K04M3_12410 7e683f6eface63618f4f99cebb6bb589 269 SUPERFAMILY SSF47413 6 71 1.19E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_12410 7e683f6eface63618f4f99cebb6bb589 269 SMART SM00530 12 66 0.0013 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_12410 7e683f6eface63618f4f99cebb6bb589 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 8.2E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 K04M3_36960 0bc8b5c8c265c4a9b52b0a92c0c606a7 128 SUPERFAMILY SSF143744 5 127 1.31E-29 T 12-10-2018 IPR038084 GlcG-like domain superfamily K04M3_36960 0bc8b5c8c265c4a9b52b0a92c0c606a7 128 Pfam PF03928 Haem-degrading 5 124 3.3E-25 T 12-10-2018 IPR005624 Haem-degrading K04M3_36960 0bc8b5c8c265c4a9b52b0a92c0c606a7 128 Gene3D G3DSA:3.30.450.150 1 127 4.8E-33 T 12-10-2018 IPR038084 GlcG-like domain superfamily K04M3_18830 33beb7eb199628a02d8802933339a02e 326 Gene3D G3DSA:1.50.10.150 14 323 3.7E-86 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily K04M3_18830 33beb7eb199628a02d8802933339a02e 326 Pfam PF03595 Voltage-dependent anion channel 20 313 3.5E-56 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 K04M3_43650 51a1b721bf3ffcc90e09a6805eeeb16c 218 Pfam PF00881 Nitroreductase family 10 193 9.2E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 K04M3_43650 51a1b721bf3ffcc90e09a6805eeeb16c 218 Gene3D G3DSA:3.40.109.10 1 217 5.9E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_43650 51a1b721bf3ffcc90e09a6805eeeb16c 218 SUPERFAMILY SSF55469 6 216 2.22E-55 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 K04M3_21710 ee3d8ceedcbfbe706f5396f82951a296 209 Gene3D G3DSA:3.40.30.10 1 208 1.7E-57 T 12-10-2018 K04M3_21710 ee3d8ceedcbfbe706f5396f82951a296 209 SUPERFAMILY SSF52833 3 184 7.48E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_21710 ee3d8ceedcbfbe706f5396f82951a296 209 Pfam PF13743 Thioredoxin 6 175 5.9E-22 T 12-10-2018 K04M3_33300 547bd8df1d6c425358266b9576cda023 103 Pfam PF04519 Polymer-forming cytoskeletal 2 65 1.0E-14 T 12-10-2018 IPR007607 Bactofilin A/B K04M3_23800 a5fc8da7cfbe60398124bb748013b7d2 281 Gene3D G3DSA:3.60.10.10 60 281 6.9E-16 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_23800 a5fc8da7cfbe60398124bb748013b7d2 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 55.802 T 12-10-2018 IPR022958 Uncharacterised protein family UPF0294 K04M3_23800 a5fc8da7cfbe60398124bb748013b7d2 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 3.2E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_23800 a5fc8da7cfbe60398124bb748013b7d2 281 SUPERFAMILY SSF56219 59 279 7.98E-21 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 315 330 7.2E-7 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 7.2E-7 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 7.2E-7 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.2E-7 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 393 412 7.2E-7 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 3.2E-66 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 Pfam PF01578 Cytochrome C assembly protein 89 294 6.4E-39 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 K04M3_19840 18e79ab541bce7a6e7778cd8eb17eba6 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 317 619 8.4E-64 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal K04M3_35090 743065c324a6f8b2ef78581a386c1b82 93 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 15 78 2.0E-27 T 12-10-2018 K04M3_35090 743065c324a6f8b2ef78581a386c1b82 93 Pfam PF14145 YrhK-like protein 21 74 4.9E-17 T 12-10-2018 IPR025424 YrhK domain K04M3_03640 a6ebbe01900f9eb2ce2d610d00517ce8 211 SUPERFAMILY SSF101473 2 207 8.24E-58 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 K04M3_03640 a6ebbe01900f9eb2ce2d610d00517ce8 211 Pfam PF02734 DAK2 domain 33 205 2.3E-54 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 K04M3_03640 a6ebbe01900f9eb2ce2d610d00517ce8 211 Gene3D G3DSA:1.25.40.340 1 209 2.3E-68 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 K04M3_03640 a6ebbe01900f9eb2ce2d610d00517ce8 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 9.4E-79 T 12-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 K04M3_03640 a6ebbe01900f9eb2ce2d610d00517ce8 211 SMART SM01120 32 206 8.8E-79 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 K04M3_31060 455652e9ac04fb155266c97636868cce 194 Pfam PF01914 MarC family integral membrane protein 3 192 3.0E-54 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_31060 455652e9ac04fb155266c97636868cce 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 2.8E-29 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_40120 12f43a4950ed9bae5c0da8c513b26be8 63 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 5.2E-21 T 12-10-2018 IPR021677 Protein of unknown function DUF2986 K04M3_20620 a07ff66e3ab78ab121e3bbf66f13d052 141 SUPERFAMILY SSF55729 13 131 3.32E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_20620 a07ff66e3ab78ab121e3bbf66f13d052 141 Pfam PF00583 Acetyltransferase (GNAT) family 36 121 6.3E-12 T 12-10-2018 IPR000182 GNAT domain K04M3_20620 a07ff66e3ab78ab121e3bbf66f13d052 141 Gene3D G3DSA:3.40.630.30 2 131 1.4E-38 T 12-10-2018 K04M3_17120 144e547f257c0bbc757c79c7e26d243a 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.0E-140 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane K04M3_09840 3906a084b25141d70cf920a1dbe55132 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 2.3E-82 T 12-10-2018 IPR018707 Protein of unknown function DUF2219 K04M3_09840 3906a084b25141d70cf920a1dbe55132 325 Gene3D G3DSA:2.40.128.140 19 324 8.5E-52 T 12-10-2018 IPR037107 Putative outer membrane protein superfamily K04M3_22150 8159e643bf70554806c46288dd1c9957 232 Gene3D G3DSA:1.20.1080.10 1 229 1.0E-84 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 2.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 2.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 2.5E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 Pfam PF00230 Major intrinsic protein 2 222 7.5E-47 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 34.868 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 SUPERFAMILY SSF81338 2 227 3.53E-67 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_22150 8159e643bf70554806c46288dd1c9957 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.4E-58 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 K04M3_04140 c075937d2ec6bbffe210ec9532978dc7 156 Gene3D G3DSA:2.30.30.220 1 126 4.7E-53 T 12-10-2018 IPR036760 SspB-like superfamily K04M3_04140 c075937d2ec6bbffe210ec9532978dc7 156 SUPERFAMILY SSF101738 1 115 2.49E-49 T 12-10-2018 IPR036760 SspB-like superfamily K04M3_04140 c075937d2ec6bbffe210ec9532978dc7 156 Pfam PF04386 Stringent starvation protein B 4 156 1.3E-42 T 12-10-2018 IPR007481 Stringent starvation protein B K04M3_04140 c075937d2ec6bbffe210ec9532978dc7 156 PIRSF PIRSF005276 1 156 2.0E-62 T 12-10-2018 IPR007481 Stringent starvation protein B K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.3E-101 T 12-10-2018 K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 Gene3D G3DSA:3.60.10.10 1 268 1.3E-78 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 SUPERFAMILY SSF56219 1 268 5.37E-87 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 8.1E-88 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 K04M3_09930 1d95fc5d35d0e23d38122faf7c8045fb 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.4E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 Gene3D G3DSA:3.40.190.10 92 293 1.1E-49 T 12-10-2018 K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 Pfam PF03466 LysR substrate binding domain 88 295 3.4E-33 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 Gene3D G3DSA:1.10.10.10 4 91 7.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 Gene3D G3DSA:3.40.190.10 163 268 1.1E-49 T 12-10-2018 K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 SUPERFAMILY SSF53850 89 297 1.15E-34 T 12-10-2018 K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_16920 ef0b0d0be1e451876340ca89c56fa7c1 309 SUPERFAMILY SSF46785 5 87 1.46E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_06350 39cc4430974848112a1f1a8bc9f3c3ca 127 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 21 1.7E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_06350 39cc4430974848112a1f1a8bc9f3c3ca 127 SUPERFAMILY SSF54523 1 121 1.26E-19 T 12-10-2018 K04M3_06350 39cc4430974848112a1f1a8bc9f3c3ca 127 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 22 107 4.3E-15 T 12-10-2018 IPR031982 Type IV minor pilin ComP K04M3_06350 39cc4430974848112a1f1a8bc9f3c3ca 127 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 1 21 8.3E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_06350 39cc4430974848112a1f1a8bc9f3c3ca 127 Gene3D G3DSA:3.30.700.10 2 127 1.1E-21 T 12-10-2018 K04M3_36100 5aeca72f84a7c0a3f16064a930f29227 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 3.6E-27 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 K04M3_36100 5aeca72f84a7c0a3f16064a930f29227 99 Gene3D G3DSA:3.30.70.860 2 99 3.6E-39 T 12-10-2018 IPR035571 UPF0234-like, C-terminal K04M3_48980 361a83cb19e8c141489ab0072d8483e2 279 Pfam PF00756 Putative esterase 23 271 1.6E-60 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 K04M3_48980 361a83cb19e8c141489ab0072d8483e2 279 Gene3D G3DSA:3.40.50.1820 3 278 3.2E-94 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_48980 361a83cb19e8c141489ab0072d8483e2 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 3.8E-122 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 K04M3_48980 361a83cb19e8c141489ab0072d8483e2 279 SUPERFAMILY SSF53474 3 277 3.08E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_21180 9b827b9355edb65ba64376ffe3475286 519 Pfam PF00916 Sulfate permease family 13 374 2.6E-56 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 K04M3_21180 9b827b9355edb65ba64376ffe3475286 519 Gene3D G3DSA:3.30.750.24 409 499 3.9E-27 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_21180 9b827b9355edb65ba64376ffe3475286 519 SUPERFAMILY SSF52091 416 498 7.26E-12 T 12-10-2018 IPR036513 STAS domain superfamily K04M3_21180 9b827b9355edb65ba64376ffe3475286 519 Pfam PF01740 STAS domain 417 503 1.4E-6 T 12-10-2018 IPR002645 STAS domain K04M3_11670 4b5eeb343ee2dcec8d4c9c0fde750b91 148 Pfam PF03724 META domain 34 141 1.0E-27 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ K04M3_11670 4b5eeb343ee2dcec8d4c9c0fde750b91 148 Gene3D G3DSA:2.40.128.270 40 143 7.8E-29 T 12-10-2018 IPR038670 HslJ-like superfamily K04M3_08630 b3778e1d5d0d9a7aa69b6fffec0da678 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 173 5.7E-36 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 K04M3_08630 b3778e1d5d0d9a7aa69b6fffec0da678 185 PIRSF PIRSF004982 2 185 3.0E-60 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 K04M3_08630 b3778e1d5d0d9a7aa69b6fffec0da678 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 164 3.9E-44 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 K04M3_15060 5ffc622c9f5e79f6fa31c238391d35eb 374 SUPERFAMILY SSF55781 13 138 3.27E-6 T 12-10-2018 K04M3_15060 5ffc622c9f5e79f6fa31c238391d35eb 374 Gene3D G3DSA:1.10.3210.10 157 368 1.9E-33 T 12-10-2018 K04M3_15060 5ffc622c9f5e79f6fa31c238391d35eb 374 SUPERFAMILY SSF109604 171 352 4.32E-13 T 12-10-2018 K04M3_15060 5ffc622c9f5e79f6fa31c238391d35eb 374 Gene3D G3DSA:3.30.450.40 10 156 3.5E-5 T 12-10-2018 IPR029016 GAF-like domain superfamily K04M3_15060 5ffc622c9f5e79f6fa31c238391d35eb 374 Pfam PF13487 HD domain 274 304 8.4E-9 T 12-10-2018 K04M3_44770 dd10a44c88d71530cc9818ec13b15a56 302 SUPERFAMILY SSF51430 7 293 6.42E-69 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_44770 dd10a44c88d71530cc9818ec13b15a56 302 Gene3D G3DSA:3.20.20.100 1 302 1.8E-99 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily K04M3_44770 dd10a44c88d71530cc9818ec13b15a56 302 Pfam PF00248 Aldo/keto reductase family 17 291 3.3E-58 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain K04M3_34490 fbb68e38db463ac4e387027633e48ca2 265 SUPERFAMILY SSF141868 30 257 8.63E-10 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_34490 fbb68e38db463ac4e387027633e48ca2 265 Pfam PF00563 EAL domain 31 250 2.1E-9 T 12-10-2018 IPR001633 EAL domain K04M3_34490 fbb68e38db463ac4e387027633e48ca2 265 Gene3D G3DSA:3.20.20.450 26 261 1.9E-9 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_13000 983bf5c97a58bd9e06a629d95d1df3ec 178 Pfam PF08875 Domain of unknown function (DUF1833) 51 165 1.0E-14 T 12-10-2018 IPR014974 Domain of unknown function DUF1833 K04M3_16510 36a1cd83aff220ddd0d4c22d03f8ac7b 401 SUPERFAMILY SSF161098 91 160 1.83E-11 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16510 36a1cd83aff220ddd0d4c22d03f8ac7b 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 5.5E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_16510 36a1cd83aff220ddd0d4c22d03f8ac7b 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 5.9E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_16510 36a1cd83aff220ddd0d4c22d03f8ac7b 401 Gene3D G3DSA:1.10.3720.10 191 397 8.0E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16510 36a1cd83aff220ddd0d4c22d03f8ac7b 401 Gene3D G3DSA:1.10.3720.10 79 183 1.5E-14 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16510 36a1cd83aff220ddd0d4c22d03f8ac7b 401 SUPERFAMILY SSF161098 193 382 7.85E-24 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 SMART SM00382 179 360 7.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 33 454 2.0E-173 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 39 455 4.2E-199 T 12-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 SUPERFAMILY SSF52540 113 382 1.29E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 167 376 4.7E-78 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 45 110 2.3E-9 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 K04M3_17280 adea241c36ab5ba679b43acf6898ebff 458 Gene3D G3DSA:3.40.50.12240 34 457 3.1E-150 T 12-10-2018 K04M3_27940 896d9741d731f8151d835c9461505963 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-54 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 K04M3_27940 896d9741d731f8151d835c9461505963 162 Pfam PF02470 MlaD protein 39 118 1.0E-20 T 12-10-2018 IPR003399 Mce/MlaD K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Gene3D G3DSA:1.10.10.10 1 56 2.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.3E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 SMART SM00344 5 114 3.7E-42 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Gene3D G3DSA:3.30.70.920 57 151 4.0E-26 T 12-10-2018 K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 SUPERFAMILY SSF46785 3 64 7.58E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.8E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.8E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.8E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 SUPERFAMILY SSF54909 65 150 1.88E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_32760 6a1f1ae1dc5278b0fa59744a68d7bfef 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 1.6E-15 T 12-10-2018 K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 1.2E-40 T 12-10-2018 K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 SUPERFAMILY SSF51735 126 305 2.58E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 Gene3D G3DSA:3.40.50.720 129 310 1.4E-129 T 12-10-2018 K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 SMART SM00829 20 338 1.7E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 Gene3D G3DSA:3.90.180.10 17 338 1.4E-129 T 12-10-2018 K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 SUPERFAMILY SSF50129 5 145 6.64E-43 T 12-10-2018 IPR011032 GroES-like superfamily K04M3_35760 0f0ef23b153b9a9e185035348aeb1480 344 Pfam PF00107 Zinc-binding dehydrogenase 160 296 4.3E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 Gene3D G3DSA:1.10.1660.10 1 125 5.7E-32 T 12-10-2018 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.8E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 SMART SM00422 1 70 2.4E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 SUPERFAMILY SSF46955 1 126 3.26E-33 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 8.2E-63 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.8E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.8E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_43330 7a9eea256393d974c99ba77e4459206a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.8E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_44870 63285d09a53a8f11615c4694effb0301 276 Gene3D G3DSA:3.40.250.10 155 276 2.1E-42 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_44870 63285d09a53a8f11615c4694effb0301 276 Pfam PF00581 Rhodanese-like domain 7 124 6.1E-11 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_44870 63285d09a53a8f11615c4694effb0301 276 Pfam PF00581 Rhodanese-like domain 154 268 7.1E-12 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_44870 63285d09a53a8f11615c4694effb0301 276 Gene3D G3DSA:3.40.250.10 1 143 4.2E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_44870 63285d09a53a8f11615c4694effb0301 276 SMART SM00450 152 272 3.6E-17 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_44870 63285d09a53a8f11615c4694effb0301 276 SMART SM00450 5 128 3.0E-16 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_44870 63285d09a53a8f11615c4694effb0301 276 SUPERFAMILY SSF52821 3 137 7.86E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_44870 63285d09a53a8f11615c4694effb0301 276 SUPERFAMILY SSF52821 154 275 6.16E-35 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_47750 37f8242724cefb56229370123837cd7c 514 Gene3D G3DSA:1.25.40.80 132 323 3.7E-102 T 12-10-2018 K04M3_47750 37f8242724cefb56229370123837cd7c 514 Gene3D G3DSA:1.10.579.10 327 447 2.0E-54 T 12-10-2018 K04M3_47750 37f8242724cefb56229370123837cd7c 514 Gene3D G3DSA:1.10.10.1710 448 513 1.9E-24 T 12-10-2018 K04M3_47750 37f8242724cefb56229370123837cd7c 514 SUPERFAMILY SSF48173 229 500 1.26E-62 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 K04M3_47750 37f8242724cefb56229370123837cd7c 514 Gene3D G3DSA:3.40.50.620 8 230 3.7E-102 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_47750 37f8242724cefb56229370123837cd7c 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 4.4E-69 T 12-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein K04M3_15450 161f86e07dbd1fa71717c0d899361ec7 476 Pfam PF01943 Polysaccharide biosynthesis protein 7 268 1.1E-11 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 K04M3_24890 a7182d4008c992b58608da688cae53fc 118 Pfam PF11012 Protein of unknown function (DUF2850) 32 109 8.5E-31 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 K04M3_41300 d882b88771541c60b4a6bfaabc949fb8 263 Pfam PF00593 TonB dependent receptor 1 258 1.9E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_41300 d882b88771541c60b4a6bfaabc949fb8 263 Gene3D G3DSA:2.40.170.20 1 263 9.7E-70 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_41300 d882b88771541c60b4a6bfaabc949fb8 263 SUPERFAMILY SSF56935 1 262 4.27E-45 T 12-10-2018 K04M3_08120 832f8902aad04b00d41621c1ad2aa01c 181 SUPERFAMILY SSF56300 2 165 1.31E-37 T 12-10-2018 K04M3_08120 832f8902aad04b00d41621c1ad2aa01c 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 1.2E-27 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 K04M3_08120 832f8902aad04b00d41621c1ad2aa01c 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 2.1E-21 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 K04M3_08120 832f8902aad04b00d41621c1ad2aa01c 181 Gene3D G3DSA:3.60.21.10 1 181 9.8E-61 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_37100 f99538b1017ce21912dc160733d44b81 397 Pfam PF07690 Major Facilitator Superfamily 17 349 2.3E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_37100 f99538b1017ce21912dc160733d44b81 397 Gene3D G3DSA:1.20.1720.10 6 381 3.7E-84 T 12-10-2018 K04M3_37100 f99538b1017ce21912dc160733d44b81 397 SUPERFAMILY SSF103473 4 384 3.01E-55 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_37100 f99538b1017ce21912dc160733d44b81 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 365 2.4E-60 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:1.10.10.350 369 473 4.9E-24 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 SUPERFAMILY SSF48163 302 465 1.96E-45 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 1.7E-196 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.215 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 Gene3D G3DSA:3.40.50.620 2 317 1.6E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 SUPERFAMILY SSF52374 3 301 1.18E-110 T 12-10-2018 K04M3_07560 70fa40b6f313a6e93089726b1518ecc9 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 7.8E-117 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 SUPERFAMILY SSF52788 4 124 1.57E-27 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 Gene3D G3DSA:3.40.50.2300 1 124 1.6E-35 T 12-10-2018 K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 95 110 6.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 23 39 6.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 92 6.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 57 72 6.0E-17 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 120 4.9E-27 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I K04M3_33900 b60aae3a0dea18f9115c0f14bb3aad94 124 SMART SM00226 1 123 2.5E-24 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I K04M3_48660 cc5c24dccec4a9ef6565867a65ba8a8f 175 SUPERFAMILY SSF55729 1 156 3.43E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_48660 cc5c24dccec4a9ef6565867a65ba8a8f 175 Gene3D G3DSA:3.40.630.30 1 165 1.8E-30 T 12-10-2018 K04M3_48660 cc5c24dccec4a9ef6565867a65ba8a8f 175 Pfam PF00583 Acetyltransferase (GNAT) family 40 139 3.1E-16 T 12-10-2018 IPR000182 GNAT domain K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 SMART SM00418 14 95 2.6E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 SUPERFAMILY SSF46785 9 95 2.25E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 3.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 3.7E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 Gene3D G3DSA:1.10.10.10 2 96 2.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_40340 13ea62c03c69f39e101c7459c06002df 96 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 2.8E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 Gene3D G3DSA:2.160.20.80 3 216 1.2E-56 T 12-10-2018 K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 SUPERFAMILY SSF141571 6 50 6.28E-9 T 12-10-2018 K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 54 74 0.0092 T 12-10-2018 IPR001646 Pentapeptide repeat K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 17 48 4.7E-6 T 12-10-2018 IPR001646 Pentapeptide repeat K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 79 105 5.2E-5 T 12-10-2018 IPR001646 Pentapeptide repeat K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 SUPERFAMILY SSF141571 53 215 3.43E-36 T 12-10-2018 K04M3_48880 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF13599 Pentapeptide repeats (9 copies) 113 166 3.5E-9 T 12-10-2018 IPR001646 Pentapeptide repeat K04M3_17790 3e22eb55afe2b12b7863373598db1441 285 Pfam PF08543 Phosphomethylpyrimidine kinase 76 253 3.5E-21 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 K04M3_17790 3e22eb55afe2b12b7863373598db1441 285 SUPERFAMILY SSF53613 1 269 7.48E-69 T 12-10-2018 IPR029056 Ribokinase-like K04M3_17790 3e22eb55afe2b12b7863373598db1441 285 Gene3D G3DSA:3.40.1190.20 1 285 2.3E-85 T 12-10-2018 IPR029056 Ribokinase-like K04M3_17790 3e22eb55afe2b12b7863373598db1441 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 2.9E-99 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 K04M3_10450 82fe7a901d69541b1f06aba73521d81c 147 Gene3D G3DSA:3.30.420.270 63 136 2.9E-16 T 12-10-2018 K04M3_10450 82fe7a901d69541b1f06aba73521d81c 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.034 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 K04M3_10450 82fe7a901d69541b1f06aba73521d81c 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 1.3E-25 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 K04M3_38840 459a3a579052b9fef80e1c0dd26b02cd 454 Gene3D G3DSA:3.40.190.10 119 437 3.3E-141 T 12-10-2018 K04M3_38840 459a3a579052b9fef80e1c0dd26b02cd 454 SUPERFAMILY SSF53850 34 334 8.25E-20 T 12-10-2018 K04M3_38840 459a3a579052b9fef80e1c0dd26b02cd 454 Gene3D G3DSA:3.40.190.10 34 432 3.3E-141 T 12-10-2018 K04M3_38840 459a3a579052b9fef80e1c0dd26b02cd 454 Pfam PF13379 NMT1-like family 28 308 1.2E-105 T 12-10-2018 K04M3_45020 670b6fffd76ac280451c2a7f3ffad183 287 PIRSF PIRSF028200 12 287 2.5E-89 T 12-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 K04M3_11510 33d1b7b8c5ced5ec1cb3636652421359 188 SUPERFAMILY SSF48150 5 186 2.82E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 K04M3_11510 33d1b7b8c5ced5ec1cb3636652421359 188 Pfam PF03352 Methyladenine glycosylase 9 184 5.5E-73 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 K04M3_11510 33d1b7b8c5ced5ec1cb3636652421359 188 Gene3D G3DSA:1.10.340.30 4 188 7.9E-77 T 12-10-2018 K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 Gene3D G3DSA:3.40.50.12370 3 282 2.1E-62 T 12-10-2018 K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 Pfam PF00582 Universal stress protein family 196 282 1.3E-10 T 12-10-2018 IPR006016 UspA K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 Pfam PF00582 Universal stress protein family 2 155 2.9E-13 T 12-10-2018 IPR006016 UspA K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 SUPERFAMILY SSF52402 166 282 1.51E-19 T 12-10-2018 K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 SUPERFAMILY SSF52402 1 155 7.53E-15 T 12-10-2018 K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 PRINTS PR01438 Universal stress protein signature 1 19 6.5E-8 T 12-10-2018 IPR006015 Universal stress protein A K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 PRINTS PR01438 Universal stress protein signature 242 254 6.5E-8 T 12-10-2018 IPR006015 Universal stress protein A K04M3_24500 8b882d836f5a8b1d29b2a7bc5656f9c7 282 PRINTS PR01438 Universal stress protein signature 260 282 6.5E-8 T 12-10-2018 IPR006015 Universal stress protein A K04M3_12750 0e7884a572ceab65e6221af46e0fc380 243 Gene3D G3DSA:3.40.50.300 19 226 5.1E-44 T 12-10-2018 K04M3_12750 0e7884a572ceab65e6221af46e0fc380 243 Pfam PF01695 IstB-like ATP binding protein 90 215 6.0E-20 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 K04M3_12750 0e7884a572ceab65e6221af46e0fc380 243 SUPERFAMILY SSF52540 93 218 1.73E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_18540 ccdfbf4d5f38b43f13b2207ec6daf12f 229 Pfam PF01699 Sodium/calcium exchanger protein 43 196 7.3E-13 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 K04M3_08310 28b83ff8a6e0169f3cfc5dba2c002799 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.5E-19 T 12-10-2018 IPR021249 Protein of unknown function DUF2788 K04M3_31880 75fd0a873363ca54207718e2ce6ac46e 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 5.0E-40 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 K04M3_31880 75fd0a873363ca54207718e2ce6ac46e 185 Pfam PF01300 Telomere recombination 10 185 3.6E-50 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 K04M3_31880 75fd0a873363ca54207718e2ce6ac46e 185 Gene3D G3DSA:3.90.870.10 1 183 1.5E-62 T 12-10-2018 K04M3_31880 75fd0a873363ca54207718e2ce6ac46e 185 SUPERFAMILY SSF55821 2 182 2.47E-58 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily K04M3_31880 75fd0a873363ca54207718e2ce6ac46e 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.676 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 K04M3_36630 cf772266e80a8a086d1afae04942ab29 188 SUPERFAMILY SSF49503 78 186 9.92E-21 T 12-10-2018 IPR008972 Cupredoxin K04M3_36630 cf772266e80a8a086d1afae04942ab29 188 Gene3D G3DSA:2.60.40.420 67 188 1.4E-18 T 12-10-2018 IPR008972 Cupredoxin K04M3_24790 93fd33f6b7c86fdc64405619e3cef701 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 227 4.2E-12 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 K04M3_24790 93fd33f6b7c86fdc64405619e3cef701 452 Pfam PF14344 Domain of unknown function (DUF4397) 31 153 6.7E-17 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 K04M3_24790 93fd33f6b7c86fdc64405619e3cef701 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 1.2E-17 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 SUPERFAMILY SSF103473 3 380 7.19E-62 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 PRINTS PR01035 Tetracycline resistance protein signature 98 119 2.5E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 PRINTS PR01035 Tetracycline resistance protein signature 40 59 2.5E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 PRINTS PR01035 Tetracycline resistance protein signature 158 178 2.5E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 PRINTS PR01035 Tetracycline resistance protein signature 10 26 2.5E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 Gene3D G3DSA:1.20.1250.20 196 385 9.4E-21 T 12-10-2018 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 Pfam PF07690 Major Facilitator Superfamily 9 320 2.8E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_16740 73bc4b54ad6ce6ac9a0d32dd2821e723 393 Gene3D G3DSA:1.20.1250.20 2 195 5.6E-27 T 12-10-2018 K04M3_38850 da27facf83145113d3f55aa67fc3c649 321 Gene3D G3DSA:1.10.3720.10 104 307 8.2E-23 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_38850 da27facf83145113d3f55aa67fc3c649 321 SUPERFAMILY SSF161098 105 302 3.79E-25 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_38850 da27facf83145113d3f55aa67fc3c649 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 299 4.2E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_51690 f9a7d50d03b2599e25d05238f7343e4d 136 Gene3D G3DSA:1.10.1710.10 2 136 3.9E-10 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily K04M3_51690 f9a7d50d03b2599e25d05238f7343e4d 136 SUPERFAMILY SSF48657 34 128 1.31E-13 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily K04M3_51690 f9a7d50d03b2599e25d05238f7343e4d 136 Pfam PF04352 ProQ/FINO family 34 132 3.3E-11 T 12-10-2018 IPR016103 ProQ/FinO domain K04M3_23330 7d2b88990e1421bb08cbf906618e1e22 465 Gene3D G3DSA:3.40.50.300 6 381 2.1E-15 T 12-10-2018 K04M3_23330 7d2b88990e1421bb08cbf906618e1e22 465 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 362 3.6E-18 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_23330 7d2b88990e1421bb08cbf906618e1e22 465 SUPERFAMILY SSF52540 21 366 4.95E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_18880 6de3f724b4358e308efa86db57a86910 204 SMART SM00448 4 116 2.6E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 SUPERFAMILY SSF52172 4 132 1.71E-26 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_18880 6de3f724b4358e308efa86db57a86910 204 Gene3D G3DSA:3.40.50.12740 5 199 1.8E-43 T 12-10-2018 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 SMART SM00421 141 198 2.7E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 5.8E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 5.8E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 5.8E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 Pfam PF00072 Response regulator receiver domain 6 114 2.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 194 8.0E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_18880 6de3f724b4358e308efa86db57a86910 204 SUPERFAMILY SSF46894 140 198 5.78E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_34930 8e7c50d07d862ccff80a731b122790dc 379 Gene3D G3DSA:3.20.20.70 3 378 4.0E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_34930 8e7c50d07d862ccff80a731b122790dc 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.5E-126 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 K04M3_34930 8e7c50d07d862ccff80a731b122790dc 379 SUPERFAMILY SSF51395 7 375 2.87E-98 T 12-10-2018 K04M3_34930 8e7c50d07d862ccff80a731b122790dc 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 K04M3_34930 8e7c50d07d862ccff80a731b122790dc 379 PIRSF PIRSF000138 2 379 3.9E-122 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 Gene3D G3DSA:1.20.81.30 59 176 1.3E-31 T 12-10-2018 K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 2.6E-30 T 12-10-2018 IPR018076 Type II secretion system F domain K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.3E-26 T 12-10-2018 IPR018076 Type II secretion system F domain K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 Gene3D G3DSA:1.20.81.30 257 370 1.7E-28 T 12-10-2018 K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 6.6E-9 T 12-10-2018 IPR003004 GspF/PilC family K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 6.6E-9 T 12-10-2018 IPR003004 GspF/PilC family K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 6.6E-9 T 12-10-2018 IPR003004 GspF/PilC family K04M3_28310 4491ea71ae15cfffe57bf5f3af6b91b6 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 6.6E-9 T 12-10-2018 IPR003004 GspF/PilC family K04M3_14780 a91b93de8abe93ce86b229bfab228afd 483 Pfam PF00884 Sulfatase 28 343 5.0E-56 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 K04M3_14780 a91b93de8abe93ce86b229bfab228afd 483 SUPERFAMILY SSF53649 27 427 6.98E-101 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 K04M3_14780 a91b93de8abe93ce86b229bfab228afd 483 Gene3D G3DSA:3.40.720.10 28 371 2.6E-103 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 K04M3_14780 a91b93de8abe93ce86b229bfab228afd 483 Gene3D G3DSA:3.30.1120.10 372 429 2.6E-103 T 12-10-2018 K04M3_08860 650199c591b271eeb1e274b808e09197 571 SUPERFAMILY SSF53448 11 240 6.56E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_08860 650199c591b271eeb1e274b808e09197 571 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 264 560 2.6E-16 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 K04M3_08860 650199c591b271eeb1e274b808e09197 571 Pfam PF00535 Glycosyl transferase family 2 11 130 2.6E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_08860 650199c591b271eeb1e274b808e09197 571 Gene3D G3DSA:3.90.550.10 10 219 1.5E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_30950 9d9d1c74227be23a76031c2ebf8eaf63 284 Gene3D G3DSA:1.10.357.140 19 167 1.1E-43 T 12-10-2018 K04M3_30950 9d9d1c74227be23a76031c2ebf8eaf63 284 Pfam PF01040 UbiA prenyltransferase family 24 266 2.1E-70 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 K04M3_30950 9d9d1c74227be23a76031c2ebf8eaf63 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.3E-107 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 K04M3_30950 9d9d1c74227be23a76031c2ebf8eaf63 284 Gene3D G3DSA:1.20.120.1780 168 284 9.8E-14 T 12-10-2018 K04M3_30950 9d9d1c74227be23a76031c2ebf8eaf63 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.791 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 K04M3_05550 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_05550 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_05550 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 1 197 4.3E-72 T 12-10-2018 K04M3_05550 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 2.1E-58 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_05550 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 8.0E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 K04M3_26020 d5b217bf36a066d66c99fb0dee928f54 122 PIRSF PIRSF006287 1 122 1.9E-47 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 K04M3_26020 d5b217bf36a066d66c99fb0dee928f54 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 9.0E-60 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 K04M3_26020 d5b217bf36a066d66c99fb0dee928f54 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 2 120 3.4E-40 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 K04M3_26020 d5b217bf36a066d66c99fb0dee928f54 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.111 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 K04M3_31620 e771c4d70acb5f479af4cd8263fb8093 151 Pfam PF07681 DoxX 27 108 3.8E-18 T 12-10-2018 IPR032808 DoxX family K04M3_01570 a0396081f66d544b13c2ab478d10ef75 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 4.2E-60 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_01570 a0396081f66d544b13c2ab478d10ef75 608 SUPERFAMILY SSF53850 41 561 3.62E-98 T 12-10-2018 K04M3_01570 a0396081f66d544b13c2ab478d10ef75 608 Gene3D G3DSA:3.10.105.10 319 542 1.3E-43 T 12-10-2018 K04M3_01570 a0396081f66d544b13c2ab478d10ef75 608 Gene3D G3DSA:3.40.190.10 19 318 5.2E-47 T 12-10-2018 K04M3_01570 a0396081f66d544b13c2ab478d10ef75 608 PIRSF PIRSF002741 1 563 3.7E-71 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_33950 8e950f57c798f997c7cc6370cf389945 290 SUPERFAMILY SSF52151 4 246 2.51E-32 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_33950 8e950f57c798f997c7cc6370cf389945 290 Pfam PF01734 Patatin-like phospholipase 7 170 5.5E-13 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 K04M3_33950 8e950f57c798f997c7cc6370cf389945 290 Gene3D G3DSA:3.40.1090.10 2 84 1.8E-9 T 12-10-2018 K04M3_33950 8e950f57c798f997c7cc6370cf389945 290 Gene3D G3DSA:3.40.1090.10 85 198 2.6E-6 T 12-10-2018 K04M3_37210 9c8f0446e4516e4f78bb3d2a047892d8 210 Pfam PF01810 LysE type translocator 16 205 2.6E-27 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_37210 9c8f0446e4516e4f78bb3d2a047892d8 210 PIRSF PIRSF006324 1 209 3.0E-57 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_22130 d749c342201b15cd1f90a708a75b7616 82 Pfam PF04226 Transglycosylase associated protein 33 81 7.0E-13 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 K04M3_38780 bf0255db5236979d2cd2063a278dee3e 144 Gene3D G3DSA:3.40.630.30 1 143 1.7E-31 T 12-10-2018 K04M3_38780 bf0255db5236979d2cd2063a278dee3e 144 Pfam PF00583 Acetyltransferase (GNAT) family 22 121 2.2E-14 T 12-10-2018 IPR000182 GNAT domain K04M3_38780 bf0255db5236979d2cd2063a278dee3e 144 SUPERFAMILY SSF55729 2 140 5.57E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_38500 6547041fb88380497378de9ba69f7564 221 Gene3D G3DSA:2.60.130.10 21 221 6.6E-45 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 K04M3_38500 6547041fb88380497378de9ba69f7564 221 Pfam PF00775 Dioxygenase 63 187 1.7E-21 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 K04M3_38500 6547041fb88380497378de9ba69f7564 221 SUPERFAMILY SSF49482 28 221 2.09E-47 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 K04M3_38500 6547041fb88380497378de9ba69f7564 221 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 92 120 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 K04M3_47710 a8c4ab598db20173b0934a9b74dfa970 184 SUPERFAMILY SSF51161 3 183 1.39E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_47710 a8c4ab598db20173b0934a9b74dfa970 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 126 159 2.1E-8 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_47710 a8c4ab598db20173b0934a9b74dfa970 184 SMART SM01266 4 56 4.1E-15 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 K04M3_47710 a8c4ab598db20173b0934a9b74dfa970 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_47710 a8c4ab598db20173b0934a9b74dfa970 184 Gene3D G3DSA:2.160.10.10 1 184 2.0E-63 T 12-10-2018 K04M3_47710 a8c4ab598db20173b0934a9b74dfa970 184 Pfam PF12464 Maltose acetyltransferase 6 55 5.8E-11 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 K04M3_51800 73bde3d3d457069e33aa1189d2be8d22 538 Pfam PF14280 Domain of unknown function (DUF4365) 9 115 6.6E-7 T 12-10-2018 IPR025375 Domain of unknown function DUF4365 K04M3_03770 e1a15d587e82c84dbbb6653c656b165d 147 Gene3D G3DSA:1.10.10.410 91 147 1.3E-20 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal K04M3_03770 e1a15d587e82c84dbbb6653c656b165d 147 Gene3D G3DSA:1.10.1510.10 1 90 4.1E-28 T 12-10-2018 K04M3_03770 e1a15d587e82c84dbbb6653c656b165d 147 Pfam PF09424 Yqey-like protein 5 146 3.6E-58 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 K04M3_03770 e1a15d587e82c84dbbb6653c656b165d 147 SUPERFAMILY SSF89095 1 146 3.4E-45 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 K04M3_34280 8e27f5724a4bdd136a7ce1a6ffde9e8b 446 PIRSF PIRSF004548 1 440 1.7E-138 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD K04M3_34280 8e27f5724a4bdd136a7ce1a6ffde9e8b 446 Pfam PF06123 Inner membrane protein CreD 9 429 2.5E-145 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD K04M3_34870 917bb6ff47e5dcd5cf3077282be6895d 251 Gene3D G3DSA:2.60.40.10 31 152 6.3E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold K04M3_34870 917bb6ff47e5dcd5cf3077282be6895d 251 SUPERFAMILY SSF49354 21 152 2.33E-26 T 12-10-2018 IPR008962 PapD-like superfamily K04M3_34870 917bb6ff47e5dcd5cf3077282be6895d 251 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 151 4.6E-20 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 K04M3_32970 f6d70eeecda5aca0f37e18617320c199 888 Pfam PF13009 Putative phage integrase 27 383 3.5E-118 T 12-10-2018 IPR024965 Putative phage integrase K04M3_49840 f6d70eeecda5aca0f37e18617320c199 888 Pfam PF13009 Putative phage integrase 27 383 3.5E-118 T 12-10-2018 IPR024965 Putative phage integrase K04M3_25310 ee224ba5a2f28370821b55ed0831a3d8 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 186 324 6.4E-8 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative K04M3_25310 ee224ba5a2f28370821b55ed0831a3d8 331 SUPERFAMILY SSF56935 49 302 9.16E-5 T 12-10-2018 K04M3_01890 69626d62e04eb987da1724162e91a47c 536 Gene3D G3DSA:3.20.20.70 2 309 1.5E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_01890 69626d62e04eb987da1724162e91a47c 536 Pfam PF00682 HMGL-like 3 248 6.0E-30 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 K04M3_01890 69626d62e04eb987da1724162e91a47c 536 SUPERFAMILY SSF51569 3 264 3.85E-44 T 12-10-2018 K04M3_00770 fe053a691e561b744f8b774696c6bc24 145 Pfam PF09537 Domain of unknown function (DUF2383) 4 112 2.6E-18 T 12-10-2018 IPR019052 Domain of unknown function DUF2383 K04M3_00770 fe053a691e561b744f8b774696c6bc24 145 Gene3D G3DSA:1.20.1260.10 2 142 4.6E-10 T 12-10-2018 IPR012347 Ferritin-like K04M3_10290 329ad51478cf866bc5d1a2f6ee80275a 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 5.6E-58 T 12-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices K04M3_10290 329ad51478cf866bc5d1a2f6ee80275a 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 6.3E-109 T 12-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase K04M3_25560 55b19916fcb61be0b22d1df230d47783 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 7.4E-47 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_25560 55b19916fcb61be0b22d1df230d47783 448 Pfam PF01554 MatE 15 176 2.6E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_25560 55b19916fcb61be0b22d1df230d47783 448 Pfam PF01554 MatE 240 398 2.3E-12 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_25560 55b19916fcb61be0b22d1df230d47783 448 PIRSF PIRSF006603 1 440 5.6E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_27950 c9949f6cb5a7944e2cc628ca32268a3d 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 2.2E-95 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria K04M3_27950 c9949f6cb5a7944e2cc628ca32268a3d 263 Pfam PF02405 Permease MlaE 48 259 8.6E-74 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 K04M3_27360 78c63a7ec6046ef474656e284bdc44a3 239 SUPERFAMILY SSF53335 16 238 1.16E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_27360 78c63a7ec6046ef474656e284bdc44a3 239 Gene3D G3DSA:3.40.50.150 29 239 1.5E-71 T 12-10-2018 K04M3_27360 78c63a7ec6046ef474656e284bdc44a3 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.726 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 K04M3_27360 78c63a7ec6046ef474656e284bdc44a3 239 Pfam PF02390 Putative methyltransferase 62 232 8.7E-59 T 12-10-2018 K04M3_27360 78c63a7ec6046ef474656e284bdc44a3 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 48 238 6.9E-68 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 K04M3_15110 7c8512aede41e6a24f8d77b97e331249 740 Gene3D G3DSA:2.170.130.10 40 177 7.1E-40 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily K04M3_15110 7c8512aede41e6a24f8d77b97e331249 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 1.6E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain K04M3_15110 7c8512aede41e6a24f8d77b97e331249 740 SUPERFAMILY SSF56935 26 740 9.66E-128 T 12-10-2018 K04M3_15110 7c8512aede41e6a24f8d77b97e331249 740 Pfam PF00593 TonB dependent receptor 259 738 2.3E-43 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel K04M3_15110 7c8512aede41e6a24f8d77b97e331249 740 Gene3D G3DSA:2.40.170.20 180 740 2.5E-110 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily K04M3_15110 7c8512aede41e6a24f8d77b97e331249 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 735 2.9E-103 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 Pfam PF00089 Trypsin 45 315 3.3E-27 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 SUPERFAMILY SSF50494 48 319 8.71E-40 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 2.8E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 2.8E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 2.8E-15 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 SMART SM00020 25 315 3.1E-22 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 Gene3D G3DSA:2.40.10.10 37 156 1.2E-16 T 12-10-2018 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 Gene3D G3DSA:2.40.10.10 158 318 2.7E-24 T 12-10-2018 K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site K04M3_05600 de7db855ecce38f4355563aa3e4413b9 388 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 366 386 0.0034 T 12-10-2018 IPR020008 GlyGly-CTERM domain K04M3_22260 a020b0dafd35c5de28eca3f9e813abf2 197 Pfam PF05036 Sporulation related domain 121 189 1.4E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_22260 a020b0dafd35c5de28eca3f9e813abf2 197 Gene3D G3DSA:3.30.70.1070 114 191 1.7E-9 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_22260 a020b0dafd35c5de28eca3f9e813abf2 197 SUPERFAMILY SSF110997 120 193 4.58E-15 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_19980 2498d00662e4ac96a4e738b8c54528ee 170 Pfam PF13740 ACT domain 5 66 7.4E-10 T 12-10-2018 K04M3_19980 2498d00662e4ac96a4e738b8c54528ee 170 Gene3D G3DSA:3.30.70.260 86 170 5.4E-13 T 12-10-2018 K04M3_19980 2498d00662e4ac96a4e738b8c54528ee 170 PIRSF PIRSF028103 1 169 1.8E-40 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 K04M3_19980 2498d00662e4ac96a4e738b8c54528ee 170 SUPERFAMILY SSF55021 89 167 2.37E-10 T 12-10-2018 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 SUPERFAMILY SSF52016 630 899 8.24E-70 T 12-10-2018 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 Gene3D G3DSA:1.10.1440.20 595 648 2.7E-14 T 12-10-2018 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 Gene3D G3DSA:3.30.499.10 381 590 1.5E-86 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 Gene3D G3DSA:3.30.499.20 9 379 6.9E-145 T 12-10-2018 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 Gene3D G3DSA:3.20.19.10 649 901 1.2E-86 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 Pfam PF00694 Aconitase C-terminal domain 687 827 1.1E-31 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 Pfam PF00330 Aconitase family (aconitate hydratase) 83 562 1.2E-169 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 899 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 210 223 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 224 239 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 380 394 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 431 442 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 286 299 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 156 169 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 300 313 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 180 188 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 PRINTS PR00415 Aconitase family signature 493 506 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 K04M3_23490 a7caaf33997a0071513e59f698159b04 907 SUPERFAMILY SSF53732 11 626 3.79E-199 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 K04M3_28370 587956cc2c760eb30ef1f055c7fc284f 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 92 8.1E-8 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 K04M3_25320 c1e57fec727aeb1ffe4b877ee750e53b 563 Pfam PF00501 AMP-binding enzyme 23 440 5.4E-85 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 K04M3_25320 c1e57fec727aeb1ffe4b877ee750e53b 563 Gene3D G3DSA:3.40.50.12780 17 436 2.4E-82 T 12-10-2018 K04M3_25320 c1e57fec727aeb1ffe4b877ee750e53b 563 SUPERFAMILY SSF56801 17 547 5.76E-107 T 12-10-2018 K04M3_25320 c1e57fec727aeb1ffe4b877ee750e53b 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 12-10-2018 IPR020845 AMP-binding, conserved site K04M3_26970 6ead1c73851b8f1ecb2e78d9efc8c5ab 158 SUPERFAMILY SSF55826 7 157 3.27E-39 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_26970 6ead1c73851b8f1ecb2e78d9efc8c5ab 158 Gene3D G3DSA:3.90.960.10 2 158 1.6E-42 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 K04M3_26970 6ead1c73851b8f1ecb2e78d9efc8c5ab 158 Pfam PF04073 Aminoacyl-tRNA editing domain 28 147 3.2E-30 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 K04M3_48070 61bef79f7d79f66eb6c1b8d8f4e079cd 337 Pfam PF12706 Beta-lactamase superfamily domain 93 286 3.7E-41 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_48070 61bef79f7d79f66eb6c1b8d8f4e079cd 337 PIRSF PIRSF038896 16 336 1.8E-93 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 K04M3_48070 61bef79f7d79f66eb6c1b8d8f4e079cd 337 Gene3D G3DSA:3.60.15.10 53 334 3.2E-82 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_48070 61bef79f7d79f66eb6c1b8d8f4e079cd 337 SUPERFAMILY SSF56281 77 304 1.57E-34 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 Pfam PF00210 Ferritin-like domain 20 158 4.8E-24 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 5.3E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 5.3E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 5.3E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 SUPERFAMILY SSF47240 4 158 1.56E-43 T 12-10-2018 IPR009078 Ferritin-like superfamily K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 Gene3D G3DSA:1.20.1260.10 2 158 1.2E-53 T 12-10-2018 IPR012347 Ferritin-like K04M3_37530 1ba8be09083c2724b276b3ee6fa9bd1d 159 PIRSF PIRSF005900 1 159 1.5E-45 T 12-10-2018 IPR002177 DNA-binding protein Dps K04M3_18560 3dda04a28ccbd8a226cfab70bcd9bb57 511 Gene3D G3DSA:1.20.1600.10 97 510 5.1E-73 T 12-10-2018 K04M3_18560 3dda04a28ccbd8a226cfab70bcd9bb57 511 SUPERFAMILY SSF56954 7 504 6.02E-72 T 12-10-2018 K04M3_18560 3dda04a28ccbd8a226cfab70bcd9bb57 511 PIRSF PIRSF001892 14 510 2.9E-129 T 12-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 K04M3_18560 3dda04a28ccbd8a226cfab70bcd9bb57 511 Pfam PF02321 Outer membrane efflux protein 99 283 5.9E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_18560 3dda04a28ccbd8a226cfab70bcd9bb57 511 Pfam PF02321 Outer membrane efflux protein 313 502 1.4E-31 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_20440 d944c1ee101e364c0bee9d86bc30691d 346 Pfam PF00535 Glycosyl transferase family 2 25 187 2.3E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 K04M3_20440 d944c1ee101e364c0bee9d86bc30691d 346 SUPERFAMILY SSF53448 22 197 1.56E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_20440 d944c1ee101e364c0bee9d86bc30691d 346 Gene3D G3DSA:3.90.550.10 6 206 2.2E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_25430 c83218e0bde0f64b1186784b27937700 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.781 T 12-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 K04M3_25430 c83218e0bde0f64b1186784b27937700 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 9.5E-81 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 K04M3_25430 c83218e0bde0f64b1186784b27937700 258 SMART SM01133 10 244 3.3E-79 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 K04M3_25430 c83218e0bde0f64b1186784b27937700 258 Gene3D G3DSA:3.20.20.70 1 256 1.0E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_25430 c83218e0bde0f64b1186784b27937700 258 PIRSF PIRSF001357 5 251 8.5E-77 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 K04M3_25430 c83218e0bde0f64b1186784b27937700 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.9E-48 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 K04M3_25430 c83218e0bde0f64b1186784b27937700 258 SUPERFAMILY SSF51569 6 245 6.38E-83 T 12-10-2018 K04M3_08930 c1d0301c62c60fb37562f1b4e13bbf2a 242 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 240 1.0E-73 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal K04M3_08930 c1d0301c62c60fb37562f1b4e13bbf2a 242 SUPERFAMILY SSF53901 42 154 3.1E-6 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 K04M3_46560 71898ef5778ba1c09692fb47c922503a 195 Pfam PF13649 Methyltransferase domain 36 126 1.7E-10 T 12-10-2018 K04M3_46560 71898ef5778ba1c09692fb47c922503a 195 Gene3D G3DSA:3.40.50.150 26 195 4.1E-23 T 12-10-2018 K04M3_46560 71898ef5778ba1c09692fb47c922503a 195 SUPERFAMILY SSF53335 4 194 1.42E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_38960 8c0490dd9bd056a51a1512c438281b12 111 Gene3D G3DSA:1.20.120.160 1 111 5.0E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_38960 8c0490dd9bd056a51a1512c438281b12 111 Pfam PF01627 Hpt domain 23 101 5.4E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 K04M3_38960 8c0490dd9bd056a51a1512c438281b12 111 SUPERFAMILY SSF47226 1 110 8.24E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 K04M3_18980 fcbf296dbae3e1a7fc972435c4f14c72 913 Pfam PF16967 E-set like domain 265 330 3.7E-9 T 12-10-2018 IPR032636 Pilus assembly protein, E-set like domain K04M3_29760 f08f7c1115b000ba2e59a0ec1668ef2f 144 SMART SM00450 40 138 6.7E-21 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_29760 f08f7c1115b000ba2e59a0ec1668ef2f 144 Gene3D G3DSA:3.40.250.10 22 143 5.3E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_29760 f08f7c1115b000ba2e59a0ec1668ef2f 144 Pfam PF00581 Rhodanese-like domain 44 135 4.5E-17 T 12-10-2018 IPR001763 Rhodanese-like domain K04M3_29760 f08f7c1115b000ba2e59a0ec1668ef2f 144 SUPERFAMILY SSF52821 15 143 9.3E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily K04M3_43570 ee9b91486903a0c577d9dcfb8d963141 336 Pfam PF10974 Protein of unknown function (DUF2804) 17 335 3.2E-82 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 K04M3_22540 d26ae630a3adaad0a4e19d778ae6542e 161 Gene3D G3DSA:1.10.8.640 20 105 1.6E-36 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily K04M3_22540 d26ae630a3adaad0a4e19d778ae6542e 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 2.0E-55 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family K04M3_17720 77cdbce5963b069ba8d6d57f5965266c 471 SUPERFAMILY SSF56954 3 446 6.54E-68 T 12-10-2018 K04M3_17720 77cdbce5963b069ba8d6d57f5965266c 471 Gene3D G3DSA:1.20.1600.10 23 458 1.7E-63 T 12-10-2018 K04M3_17720 77cdbce5963b069ba8d6d57f5965266c 471 Pfam PF02321 Outer membrane efflux protein 28 243 1.2E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_17720 77cdbce5963b069ba8d6d57f5965266c 471 Pfam PF02321 Outer membrane efflux protein 267 446 6.4E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_49520 83afb67bdfa0812b84a118510ff7f8e0 69 SUPERFAMILY SSF46575 1 63 4.58E-5 T 12-10-2018 K04M3_49520 83afb67bdfa0812b84a118510ff7f8e0 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.0E-34 T 12-10-2018 IPR021700 Protein of unknown function DUF3283 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.3E-25 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 Gene3D G3DSA:3.30.70.1630 26 187 2.8E-39 T 12-10-2018 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 SUPERFAMILY SSF101790 237 320 1.57E-19 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 Gene3D G3DSA:3.30.70.1400 29 115 2.8E-39 T 12-10-2018 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 Gene3D G3DSA:2.40.30.160 190 311 7.4E-34 T 12-10-2018 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 SUPERFAMILY SSF103025 18 236 7.06E-55 T 12-10-2018 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.439 T 12-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 137 1.0E-5 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 PIRSF PIRSF006487 20 153 3.7E-5 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 K04M3_26960 d00409f49708472eabee2e679a6fbe6f 322 PIRSF PIRSF006487 156 273 0.64 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 K04M3_03260 fe444241ac8de99f9e9504e11c3ad434 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 1.4E-76 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit K04M3_03260 fe444241ac8de99f9e9504e11c3ad434 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.6E-69 T 12-10-2018 IPR021814 Protein of unknown function DUF3394 K04M3_03260 fe444241ac8de99f9e9504e11c3ad434 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 730 2.0E-214 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ K04M3_27200 e73a00dbabbecdbddb83de583b4e01f4 231 SUPERFAMILY SSF54060 20 228 1.65E-94 T 12-10-2018 K04M3_27200 e73a00dbabbecdbddb83de583b4e01f4 231 Pfam PF04231 Endonuclease I 34 227 2.8E-46 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 K04M3_01170 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 PIRSF PIRSF016821 5 128 6.0E-43 T 12-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 K04M3_01170 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 Pfam PF01479 S4 domain 8 54 2.4E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_01170 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 Gene3D G3DSA:3.10.290.10 3 107 1.1E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_01170 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 SUPERFAMILY SSF55174 8 105 4.45E-31 T 12-10-2018 K04M3_01170 e0b51b6cb7aa23706dc2f31c2bd87bdd 128 SMART SM00363 8 71 2.5E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 K04M3_01830 d763480a7535c9ac9c9374e9f283a096 156 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 45 2.3E-8 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_01830 d763480a7535c9ac9c9374e9f283a096 156 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 132 1.4E-8 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_01830 d763480a7535c9ac9c9374e9f283a096 156 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 47 76 9.3E-4 T 12-10-2018 IPR001451 Hexapeptide repeat K04M3_01830 d763480a7535c9ac9c9374e9f283a096 156 SUPERFAMILY SSF51161 12 151 7.99E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily K04M3_01830 d763480a7535c9ac9c9374e9f283a096 156 Gene3D G3DSA:2.160.10.10 2 154 5.3E-48 T 12-10-2018 K04M3_01830 d763480a7535c9ac9c9374e9f283a096 156 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 SUPERFAMILY SSF111369 200 292 2.09E-7 T 12-10-2018 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Gene3D G3DSA:2.40.30.170 282 330 3.9E-18 T 12-10-2018 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Pfam PF13533 Biotin-lipoyl like 72 110 4.5E-11 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Gene3D G3DSA:2.40.50.100 249 281 3.9E-18 T 12-10-2018 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Gene3D G3DSA:2.40.50.100 70 163 2.0E-12 T 12-10-2018 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 235 321 5.0E-8 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Gene3D G3DSA:1.10.287.470 188 248 3.9E-18 T 12-10-2018 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 Gene3D G3DSA:1.10.287.470 99 161 2.0E-12 T 12-10-2018 K04M3_45540 f6ea1fd8b932c6a4b14a03c4e54d4b46 407 SUPERFAMILY SSF111369 63 155 9.15E-8 T 12-10-2018 K04M3_18840 d3fead907f6cbbb679f78a0d8a87fa9e 113 Gene3D G3DSA:1.20.1290.10 1 113 5.5E-36 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_18840 d3fead907f6cbbb679f78a0d8a87fa9e 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 4.2E-20 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 K04M3_18840 d3fead907f6cbbb679f78a0d8a87fa9e 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 90 8.1E-13 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 K04M3_18840 d3fead907f6cbbb679f78a0d8a87fa9e 113 SUPERFAMILY SSF69118 17 109 1.1E-28 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_17290 ab35b3d498e0fcb8090d39f2068e7091 153 Pfam PF07321 Type III secretion protein YscO 2 149 1.0E-39 T 12-10-2018 IPR009929 Type III secretion sytem,YscO K04M3_22140 aaa97206edf3c029139ec5dd714b35f8 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 2.7E-6 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein K04M3_06680 7a6ed92d787807a5a9e3b045543aa383 315 SUPERFAMILY SSF103088 183 300 3.66E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_06680 7a6ed92d787807a5a9e3b045543aa383 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain K04M3_06680 7a6ed92d787807a5a9e3b045543aa383 315 Pfam PF00691 OmpA family 196 294 6.5E-17 T 12-10-2018 IPR006665 OmpA-like domain K04M3_06680 7a6ed92d787807a5a9e3b045543aa383 315 Gene3D G3DSA:3.30.1330.60 154 302 2.3E-53 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_44430 188eeef9719a0221103c0636b4716d2f 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 1.6E-179 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath K04M3_44430 188eeef9719a0221103c0636b4716d2f 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 3.5E-218 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath K04M3_31520 9eff1b5e80e7f63f7bad9c24b7ff870e 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.1E-38 T 12-10-2018 IPR022080 Protein of unknown function DUF3630 K04M3_48720 2acf31d8d7e16d41171e08ee8c4acaa3 450 Pfam PF02447 GntP family permease 1 448 2.6E-98 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 K04M3_09690 545f1ef003105057bc8958a9c0478ec5 402 Pfam PF02687 FtsX-like permease family 296 395 2.7E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_09690 545f1ef003105057bc8958a9c0478ec5 402 Pfam PF12704 MacB-like periplasmic core domain 29 209 1.6E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_09690 545f1ef003105057bc8958a9c0478ec5 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 8.6E-135 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 K04M3_48300 c97b387622664105af01b363a5376111 455 PIRSF PIRSF037714 1 450 1.4E-153 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein K04M3_48300 c97b387622664105af01b363a5376111 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 306 425 2.1E-30 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_51270 bd212485878a36199a131e1965168fd3 169 Gene3D G3DSA:3.30.700.10 24 163 1.2E-12 T 12-10-2018 K04M3_51270 bd212485878a36199a131e1965168fd3 169 SUPERFAMILY SSF54523 24 119 1.1E-12 T 12-10-2018 K04M3_08960 8838bda89c976e720e1518778f7efe8f 414 SUPERFAMILY SSF51905 6 390 3.3E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_08960 8838bda89c976e720e1518778f7efe8f 414 Pfam PF01494 FAD binding domain 7 164 1.3E-15 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 K04M3_08960 8838bda89c976e720e1518778f7efe8f 414 Gene3D G3DSA:3.50.50.60 4 414 5.0E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_07900 30eca2a68e78cf153855bf9cbe045fad 469 Gene3D G3DSA:2.40.160.10 67 467 2.0E-10 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_43040 317b894168272a08751f91150283ad10 111 SUPERFAMILY SSF101756 7 110 2.35E-33 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily K04M3_43040 317b894168272a08751f91150283ad10 111 Gene3D G3DSA:2.40.50.200 11 111 4.2E-35 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily K04M3_43040 317b894168272a08751f91150283ad10 111 Pfam PF04076 Bacterial OB fold (BOF) protein 19 110 8.0E-30 T 12-10-2018 IPR005220 Bacterial OB-fold K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 Gene3D G3DSA:1.10.10.60 170 232 1.7E-15 T 12-10-2018 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 Gene3D G3DSA:1.10.10.60 233 275 2.7E-15 T 12-10-2018 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 Pfam PF02311 AraC-like ligand binding domain 18 150 7.6E-26 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 SMART SM00342 190 272 5.0E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 SUPERFAMILY SSF46689 227 273 2.11E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 SUPERFAMILY SSF46689 174 224 4.93E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 Pfam PF12833 Helix-turn-helix domain 196 273 4.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 K04M3_37200 fd3f807a6ab50c9081eb8d65b9e702cf 275 SUPERFAMILY SSF51215 31 156 3.53E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like K04M3_30680 a59435c92f5da87ec51d48415390b85a 153 Pfam PF13508 Acetyltransferase (GNAT) domain 39 112 4.2E-8 T 12-10-2018 IPR000182 GNAT domain K04M3_30680 a59435c92f5da87ec51d48415390b85a 153 SUPERFAMILY SSF55729 5 120 2.34E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_30680 a59435c92f5da87ec51d48415390b85a 153 Gene3D G3DSA:3.40.630.30 15 137 1.4E-10 T 12-10-2018 K04M3_48610 6f1eadadb72eae8a7435b834e97e5a62 364 PIRSF PIRSF000014 1 364 2.9E-162 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 K04M3_48610 6f1eadadb72eae8a7435b834e97e5a62 364 Gene3D G3DSA:1.10.3820.10 2 180 2.8E-36 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily K04M3_48610 6f1eadadb72eae8a7435b834e97e5a62 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 4.6E-67 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal K04M3_48610 6f1eadadb72eae8a7435b834e97e5a62 364 SUPERFAMILY SSF48695 15 176 2.98E-50 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily K04M3_33940 b8cf6ffda11e56a9147d58a1629bc7fd 213 Pfam PF01914 MarC family integral membrane protein 8 206 8.8E-53 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_33940 b8cf6ffda11e56a9147d58a1629bc7fd 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 203 4.5E-49 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 K04M3_29960 ae9706e577c334e8f69c97f3a55ec2ca 460 Pfam PF01554 MatE 255 416 1.7E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_29960 ae9706e577c334e8f69c97f3a55ec2ca 460 Pfam PF01554 MatE 32 191 2.5E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_29960 ae9706e577c334e8f69c97f3a55ec2ca 460 PIRSF PIRSF006603 6 458 4.3E-132 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_29960 ae9706e577c334e8f69c97f3a55ec2ca 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 9.5E-56 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 K04M3_01530 21e7b50ee82564fd0b67a65110fe0e52 254 PIRSF PIRSF028069 4 254 7.1E-96 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 K04M3_01530 21e7b50ee82564fd0b67a65110fe0e52 254 Pfam PF11932 Protein of unknown function (DUF3450) 11 249 3.8E-89 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 K04M3_43450 e4c60e0bfc6499936d1f18750f5bf937 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 2.7E-54 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 K04M3_18050 d1c412af1a4109ebd47b00aec450238c 121 Gene3D G3DSA:1.20.120.1620 24 120 5.9E-25 T 12-10-2018 IPR038314 T6SS superfamily K04M3_18050 d1c412af1a4109ebd47b00aec450238c 121 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 31 114 1.7E-11 T 12-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein K04M3_23030 c88ae4efe6a50f726a2c68d4bdefec21 110 Pfam PF13698 Domain of unknown function (DUF4156) 24 108 4.2E-24 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 K04M3_44750 afaa31ba782ec11588dac233ba3ecb01 145 SUPERFAMILY SSF55785 10 126 1.74E-11 T 12-10-2018 IPR035965 PAS domain superfamily K04M3_44750 afaa31ba782ec11588dac233ba3ecb01 145 Gene3D G3DSA:3.30.450.20 6 140 1.2E-30 T 12-10-2018 K04M3_44750 afaa31ba782ec11588dac233ba3ecb01 145 Pfam PF00989 PAS fold 16 134 1.8E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 K04M3_27350 25bff8c7c86182c5bfba7c9c340ca19b 342 SUPERFAMILY SSF53335 107 316 1.43E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_27350 25bff8c7c86182c5bfba7c9c340ca19b 342 Pfam PF01170 Putative RNA methylase family UPF0020 133 295 1.7E-13 T 12-10-2018 IPR000241 Putative RNA methylase domain K04M3_38350 6d372391a9ac0ce580a2dfdc438b839c 368 SUPERFAMILY SSF51395 2 362 1.49E-99 T 12-10-2018 K04M3_38350 6d372391a9ac0ce580a2dfdc438b839c 368 Gene3D G3DSA:3.20.20.70 2 368 1.9E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_38350 6d372391a9ac0ce580a2dfdc438b839c 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 337 4.0E-71 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 SUPERFAMILY SSF53383 98 466 6.89E-79 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 SMART SM00345 17 76 6.7E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 Pfam PF00155 Aminotransferase class I and II 146 436 2.4E-15 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 2.0E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 Gene3D G3DSA:1.10.10.10 9 83 2.9E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 Gene3D G3DSA:3.40.640.10 103 460 4.2E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_44620 feb81ef91797e0a19ad08e825e429911 467 SUPERFAMILY SSF46785 13 78 1.06E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_01940 20ea23d9ffb477abf1d37a7520c69db2 245 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 181 7.6E-32 T 12-10-2018 IPR002654 Glycosyl transferase, family 25 K04M3_40560 3acd92e8824169bbcc2eee16b1eaf2e1 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 4.8E-203 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 K04M3_40560 3acd92e8824169bbcc2eee16b1eaf2e1 458 SUPERFAMILY SSF52467 285 458 7.77E-78 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily K04M3_40560 3acd92e8824169bbcc2eee16b1eaf2e1 458 Gene3D G3DSA:3.40.50.1220 282 458 6.9E-88 T 12-10-2018 K04M3_40560 3acd92e8824169bbcc2eee16b1eaf2e1 458 PIRSF PIRSF000204 1 458 4.0E-235 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 K04M3_20750 5d13b36b49564c2cdacb649213e66ef7 443 Pfam PF04403 Paraquat-inducible protein A 49 208 6.9E-39 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like K04M3_20750 5d13b36b49564c2cdacb649213e66ef7 443 Pfam PF04403 Paraquat-inducible protein A 265 422 6.6E-54 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like K04M3_20750 5d13b36b49564c2cdacb649213e66ef7 443 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 422 3.1E-103 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type K04M3_02340 0de7c878e9366c8214339d6b18b3f11b 218 Pfam PF11726 Inovirus Gp2 27 216 1.4E-53 T 12-10-2018 K04M3_41710 a43cdba11afb109e81b53cb8892ac94c 230 SMART SM00382 39 228 8.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_41710 a43cdba11afb109e81b53cb8892ac94c 230 Pfam PF00005 ABC transporter 30 176 1.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_41710 a43cdba11afb109e81b53cb8892ac94c 230 SUPERFAMILY SSF52540 12 228 1.82E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_41710 a43cdba11afb109e81b53cb8892ac94c 230 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_41710 a43cdba11afb109e81b53cb8892ac94c 230 Gene3D G3DSA:3.40.50.300 9 230 7.4E-71 T 12-10-2018 K04M3_05170 679cdafe2257007a288280b3722dd0aa 119 Pfam PF07238 PilZ domain 3 100 4.9E-14 T 12-10-2018 IPR009875 PilZ domain GO:0035438 K04M3_05170 679cdafe2257007a288280b3722dd0aa 119 PIRSF PIRSF028141 1 118 3.3E-36 T 12-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type K04M3_05170 679cdafe2257007a288280b3722dd0aa 119 Gene3D G3DSA:2.40.10.220 1 118 9.9E-30 T 12-10-2018 K04M3_05170 679cdafe2257007a288280b3722dd0aa 119 SUPERFAMILY SSF141371 1 117 1.57E-29 T 12-10-2018 K04M3_20650 19e8af8a04073a41c9e48c7c4fedd147 171 Pfam PF00085 Thioredoxin 54 159 1.6E-11 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 K04M3_20650 19e8af8a04073a41c9e48c7c4fedd147 171 Gene3D G3DSA:3.40.30.10 26 167 2.5E-17 T 12-10-2018 K04M3_20650 19e8af8a04073a41c9e48c7c4fedd147 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 K04M3_20650 19e8af8a04073a41c9e48c7c4fedd147 171 SUPERFAMILY SSF52833 42 162 1.13E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_14240 fd6fa7c51b2911eab16b6d9921db6a25 118 SUPERFAMILY SSF103481 14 112 3.79E-19 T 12-10-2018 K04M3_14240 fd6fa7c51b2911eab16b6d9921db6a25 118 Gene3D G3DSA:1.10.3730.20 8 117 3.6E-34 T 12-10-2018 K04M3_14240 fd6fa7c51b2911eab16b6d9921db6a25 118 Pfam PF00893 Small Multidrug Resistance protein 12 101 8.8E-24 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 K04M3_47610 0fbbe52f8326473e53b4717f7a0fa67e 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 7.7E-75 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ K04M3_47610 0fbbe52f8326473e53b4717f7a0fa67e 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 3.8E-78 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ K04M3_33890 2c9fcf64ac30e458957576159f9858d3 722 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 713 1.2E-52 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 K04M3_33890 2c9fcf64ac30e458957576159f9858d3 722 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 450 1.6E-34 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain K04M3_33890 2c9fcf64ac30e458957576159f9858d3 722 Gene3D G3DSA:3.40.50.300 442 722 8.6E-79 T 12-10-2018 K04M3_33890 2c9fcf64ac30e458957576159f9858d3 722 Pfam PF02706 Chain length determinant protein 14 106 1.2E-19 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 K04M3_33890 2c9fcf64ac30e458957576159f9858d3 722 SUPERFAMILY SSF52540 527 706 3.55E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_33890 2c9fcf64ac30e458957576159f9858d3 722 Pfam PF13614 AAA domain 539 651 9.5E-12 T 12-10-2018 IPR025669 AAA domain K04M3_30450 a1f7dd8ff3913f6e1f4e680dd46931d6 377 SMART SM00116 265 313 0.0054 T 12-10-2018 IPR000644 CBS domain K04M3_30450 a1f7dd8ff3913f6e1f4e680dd46931d6 377 Gene3D G3DSA:3.10.580.10 186 315 3.8E-42 T 12-10-2018 K04M3_30450 a1f7dd8ff3913f6e1f4e680dd46931d6 377 Pfam PF01595 Domain of unknown function DUF21 9 177 3.8E-29 T 12-10-2018 IPR002550 CNNM, transmembrane domain K04M3_30450 a1f7dd8ff3913f6e1f4e680dd46931d6 377 Pfam PF00571 CBS domain 261 313 4.3E-7 T 12-10-2018 IPR000644 CBS domain K04M3_30450 a1f7dd8ff3913f6e1f4e680dd46931d6 377 SUPERFAMILY SSF54631 181 315 1.3E-27 T 12-10-2018 K04M3_31700 3e43e9619f383a96616a00ad47a5c2f4 257 SUPERFAMILY SSF69572 2 254 4.45E-71 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 K04M3_31700 3e43e9619f383a96616a00ad47a5c2f4 257 Pfam PF00899 ThiF family 10 251 6.6E-58 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 K04M3_31700 3e43e9619f383a96616a00ad47a5c2f4 257 Gene3D G3DSA:3.40.50.720 2 257 6.6E-82 T 12-10-2018 K04M3_15350 57c59c516b14c3ea7957cf0bb218061e 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 2.1E-17 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_15350 57c59c516b14c3ea7957cf0bb218061e 159 Gene3D G3DSA:2.40.160.20 18 159 1.0E-23 T 12-10-2018 K04M3_15350 57c59c516b14c3ea7957cf0bb218061e 159 SUPERFAMILY SSF56925 17 158 2.04E-20 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_13390 d214ff77401217852ff38cea76f40e88 310 Gene3D G3DSA:1.10.3720.10 98 306 1.2E-16 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_13390 d214ff77401217852ff38cea76f40e88 310 SUPERFAMILY SSF161098 106 291 6.67E-25 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_13390 d214ff77401217852ff38cea76f40e88 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 2.8E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_13390 d214ff77401217852ff38cea76f40e88 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 66 2.0E-12 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain K04M3_02290 ee7c227c11da518ed46edf47190f37a2 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.9E-128 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 K04M3_02290 ee7c227c11da518ed46edf47190f37a2 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.9E-166 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 K04M3_02290 ee7c227c11da518ed46edf47190f37a2 335 Gene3D G3DSA:3.40.190.90 109 276 4.9E-125 T 12-10-2018 K04M3_02290 ee7c227c11da518ed46edf47190f37a2 335 PIRSF PIRSF004532 1 331 1.1E-134 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 K04M3_02290 ee7c227c11da518ed46edf47190f37a2 335 SUPERFAMILY SSF56655 1 324 1.1E-106 T 12-10-2018 K04M3_02290 ee7c227c11da518ed46edf47190f37a2 335 Gene3D G3DSA:3.30.540.10 7 319 4.9E-125 T 12-10-2018 K04M3_20160 3d2b89327bdad32503afd75f8b2ed377 285 Gene3D G3DSA:1.10.150.650 98 169 2.3E-83 T 12-10-2018 K04M3_20160 3d2b89327bdad32503afd75f8b2ed377 285 Pfam PF02811 PHP domain 4 181 3.4E-11 T 12-10-2018 IPR004013 PHP domain GO:0003824 K04M3_20160 3d2b89327bdad32503afd75f8b2ed377 285 SMART SM00481 3 70 3.3E-17 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal K04M3_20160 3d2b89327bdad32503afd75f8b2ed377 285 Gene3D G3DSA:3.20.20.140 3 250 2.3E-83 T 12-10-2018 K04M3_20160 3d2b89327bdad32503afd75f8b2ed377 285 SUPERFAMILY SSF89550 1 275 1.16E-55 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Gene3D G3DSA:1.10.287.10 2 89 6.3E-35 T 12-10-2018 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SUPERFAMILY SSF47060 3 89 1.21E-34 T 12-10-2018 IPR009068 S15/NS1, RNA-binding K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SMART SM01387 8 88 4.4E-52 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-29 T 12-10-2018 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 9.4E-39 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_25600 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_13110 cd479dafbfb0f16998aa8b3e0080c526 342 SUPERFAMILY SSF53187 9 329 1.5E-75 T 12-10-2018 K04M3_13110 cd479dafbfb0f16998aa8b3e0080c526 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 8.4E-70 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 K04M3_13110 cd479dafbfb0f16998aa8b3e0080c526 342 Gene3D G3DSA:3.40.630.10 1 342 2.9E-122 T 12-10-2018 K04M3_13110 cd479dafbfb0f16998aa8b3e0080c526 342 PIRSF PIRSF017020 4 336 7.7E-126 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 K04M3_13110 cd479dafbfb0f16998aa8b3e0080c526 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 132.727 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 K04M3_15020 b7f4e3298169d9001b7f91a259ca0a8c 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.6E-21 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 K04M3_15020 b7f4e3298169d9001b7f91a259ca0a8c 200 Gene3D G3DSA:2.60.120.620 1 189 2.9E-54 T 12-10-2018 K04M3_15020 b7f4e3298169d9001b7f91a259ca0a8c 200 SMART SM00702 11 187 1.7E-35 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 K04M3_49500 a8933339bc4e3cdd3ffea85954e58495 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 25.872 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_49500 a8933339bc4e3cdd3ffea85954e58495 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 2.5E-116 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_49500 a8933339bc4e3cdd3ffea85954e58495 360 Pfam PF01098 Cell cycle protein 14 355 3.4E-99 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_21700 5b08c6da855c00aa5eec40221179e679 441 Pfam PF13726 Na+-H+ antiporter family 2 88 9.9E-36 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal K04M3_21700 5b08c6da855c00aa5eec40221179e679 441 Pfam PF03553 Na+/H+ antiporter family 150 435 9.2E-75 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_21700 5b08c6da855c00aa5eec40221179e679 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 12-10-2018 K04M3_21700 5b08c6da855c00aa5eec40221179e679 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 12-10-2018 K04M3_38940 dfc3c959bfe8d394b7c5c74c0cc713db 153 Gene3D G3DSA:3.30.565.10 3 152 5.0E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_38940 dfc3c959bfe8d394b7c5c74c0cc713db 153 Pfam PF13581 Histidine kinase-like ATPase domain 13 137 1.2E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase K04M3_38940 dfc3c959bfe8d394b7c5c74c0cc713db 153 SUPERFAMILY SSF55874 35 146 2.64E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily K04M3_01700 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_01700 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 K04M3_01700 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_01700 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_01700 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_01700 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_13400 0189dbcd3f43cc639faec73b960ef00f 306 SUPERFAMILY SSF161098 91 290 9.29E-18 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_13400 0189dbcd3f43cc639faec73b960ef00f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 7.6E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_13400 0189dbcd3f43cc639faec73b960ef00f 306 Gene3D G3DSA:1.10.3720.10 84 300 1.3E-19 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_34190 c050a5c791815a3ccf41f13555f22745 725 Pfam PF04632 Fusaric acid resistance protein family 6 525 9.8E-44 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 K04M3_37330 80eab469b4f497ee1e3475541c6da31a 210 Gene3D G3DSA:3.40.30.10 25 208 7.3E-35 T 12-10-2018 K04M3_37330 80eab469b4f497ee1e3475541c6da31a 210 SUPERFAMILY SSF52833 27 207 7.85E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_37330 80eab469b4f497ee1e3475541c6da31a 210 Pfam PF13462 Thioredoxin 53 200 5.8E-7 T 12-10-2018 IPR012336 Thioredoxin-like fold K04M3_48250 09734ad62c0448ac51c6b605edc4c38b 213 Pfam PF16357 Putative PepSY_TM-like 14 213 1.1E-62 T 12-10-2018 IPR032307 Putative PepSY TM-like protein K04M3_06020 7d6f64fabf02d43e33f0c088d0edf17e 705 Gene3D G3DSA:3.40.50.300 1 366 2.6E-18 T 12-10-2018 K04M3_06020 7d6f64fabf02d43e33f0c088d0edf17e 705 SUPERFAMILY SSF52540 1 332 6.68E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_06020 7d6f64fabf02d43e33f0c088d0edf17e 705 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 328 4.1E-16 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 K04M3_36360 ad8a2f472912cb6fc7a57ad8eec900ce 90 Gene3D G3DSA:1.20.58.1000 1 90 6.7E-29 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily K04M3_36360 ad8a2f472912cb6fc7a57ad8eec900ce 90 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 6.4E-23 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 K04M3_08140 d49bbdd01381006e187ffb51328938ff 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 2.6E-35 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_17780 4441c56e0878989e3c872934edea6a0d 389 SUPERFAMILY SSF52151 77 293 6.28E-34 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase K04M3_17780 4441c56e0878989e3c872934edea6a0d 389 Pfam PF01734 Patatin-like phospholipase 80 265 4.8E-18 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 K04M3_17780 4441c56e0878989e3c872934edea6a0d 389 Gene3D G3DSA:3.40.1090.10 184 273 3.5E-9 T 12-10-2018 K04M3_17780 4441c56e0878989e3c872934edea6a0d 389 Gene3D G3DSA:3.40.1090.10 62 183 1.3E-16 T 12-10-2018 K04M3_15910 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 8.1E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain K04M3_15910 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 63 120 9.6E-34 T 12-10-2018 K04M3_15910 e6cc7608b2d9e7614aa6164ac0b39ae9 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site K04M3_15910 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 5 181 9.6E-34 T 12-10-2018 K04M3_15910 e6cc7608b2d9e7614aa6164ac0b39ae9 202 SUPERFAMILY SSF54862 1 183 1.26E-47 T 12-10-2018 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Pfam PF07244 Surface antigen variable number repeat 101 163 1.7E-6 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Gene3D G3DSA:3.10.20.310 185 261 6.3E-18 T 12-10-2018 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Gene3D G3DSA:3.10.20.310 20 96 3.3E-22 T 12-10-2018 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 1.1E-18 T 12-10-2018 IPR035243 TamA, POTRA domain 1 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Gene3D G3DSA:3.10.20.310 97 184 1.8E-28 T 12-10-2018 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Pfam PF01103 Surface antigen 268 567 3.7E-29 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 K04M3_03120 a71d7ab37be81e3972e6137fb8ac47d5 570 Gene3D G3DSA:2.40.160.50 262 570 9.0E-97 T 12-10-2018 K04M3_41580 003fcbc747f4ad90630c5d810d53ef25 128 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 2.4E-42 T 12-10-2018 IPR021753 Protein of unknown function DUF3319 K04M3_47630 35b034f9ed0a378c46b68c044c1267ca 179 Pfam PF00293 NUDIX domain 44 153 3.4E-6 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_47630 35b034f9ed0a378c46b68c044c1267ca 179 Gene3D G3DSA:3.90.79.10 2 177 1.8E-41 T 12-10-2018 K04M3_47630 35b034f9ed0a378c46b68c044c1267ca 179 SUPERFAMILY SSF55811 4 176 9.48E-38 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_25390 8a276579576ee36d91ecb6ccc7e2de1b 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 1.9E-38 T 12-10-2018 IPR019305 Uncharacterised protein family Smp K04M3_19310 eac97af9ecd0b3e96e9bc765e54c6e0a 73 Pfam PF09905 DNA-binding protein VF530 6 68 1.1E-34 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 K04M3_19310 eac97af9ecd0b3e96e9bc765e54c6e0a 73 Gene3D G3DSA:1.10.720.30 14 72 2.9E-30 T 12-10-2018 IPR036361 SAP domain superfamily K04M3_45450 667bb52d0de118eb1900647ee0d03d10 420 PIRSF PIRSF006060 1 413 2.0E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_45450 667bb52d0de118eb1900647ee0d03d10 420 Pfam PF13520 Amino acid permease 9 368 4.2E-31 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 K04M3_45450 667bb52d0de118eb1900647ee0d03d10 420 Gene3D G3DSA:1.20.1740.10 1 418 1.5E-59 T 12-10-2018 K04M3_48140 bd97f981d6cbdd2916b49054f260a108 401 Gene3D G3DSA:1.20.1720.10 10 387 8.6E-97 T 12-10-2018 K04M3_48140 bd97f981d6cbdd2916b49054f260a108 401 SUPERFAMILY SSF103473 11 388 2.22E-57 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_48140 bd97f981d6cbdd2916b49054f260a108 401 Pfam PF07690 Major Facilitator Superfamily 15 354 7.1E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_41880 ab1740e96fb80bf8fe9a9930eeffe34a 69 Gene3D G3DSA:2.30.30.100 17 69 2.1E-19 T 12-10-2018 K04M3_41880 ab1740e96fb80bf8fe9a9930eeffe34a 69 SUPERFAMILY SSF50182 18 68 3.11E-15 T 12-10-2018 IPR010920 LSM domain superfamily K04M3_41880 ab1740e96fb80bf8fe9a9930eeffe34a 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 4.6E-18 T 12-10-2018 IPR010305 Protein of unknown function DUF903 K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 Gene3D G3DSA:2.40.50.100 58 201 9.4E-75 T 12-10-2018 K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 283 4.6E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 2.2E-83 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 Gene3D G3DSA:2.40.30.170 52 276 9.4E-75 T 12-10-2018 K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 Gene3D G3DSA:1.10.287.470 93 166 9.4E-75 T 12-10-2018 K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 Gene3D G3DSA:2.40.420.20 277 368 1.3E-20 T 12-10-2018 K04M3_44990 8c61866b5b50a6e4797e560196117c5e 375 SUPERFAMILY SSF111369 49 290 1.7E-62 T 12-10-2018 K04M3_11350 eb90df285e476f498a71fbc092daf94f 579 Pfam PF02065 Melibiase 160 352 1.7E-19 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 K04M3_11350 eb90df285e476f498a71fbc092daf94f 579 SUPERFAMILY SSF51445 194 526 7.35E-78 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily K04M3_11350 eb90df285e476f498a71fbc092daf94f 579 Gene3D G3DSA:3.20.20.70 188 495 2.0E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_04660 6d81195801b67e4bc2b622e7584c82bc 219 Pfam PF03358 NADPH-dependent FMN reductase 1 150 7.1E-24 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 K04M3_04660 6d81195801b67e4bc2b622e7584c82bc 219 SUPERFAMILY SSF52218 1 183 1.16E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_04660 6d81195801b67e4bc2b622e7584c82bc 219 Gene3D G3DSA:3.40.50.360 1 215 2.2E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_50150 9216e0d1a754192561e0bd47bac21851 84 SUPERFAMILY SSF143120 12 68 2.22E-7 T 12-10-2018 IPR036165 YefM-like superfamily K04M3_50150 9216e0d1a754192561e0bd47bac21851 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 12 79 1.8E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM K04M3_39260 8d93afc3fc812568ddf582de458c71a5 171 SUPERFAMILY SSF55811 2 169 5.69E-44 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 K04M3_39260 8d93afc3fc812568ddf582de458c71a5 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 K04M3_39260 8d93afc3fc812568ddf582de458c71a5 171 Gene3D G3DSA:3.90.79.10 1 167 3.0E-46 T 12-10-2018 K04M3_39260 8d93afc3fc812568ddf582de458c71a5 171 Pfam PF00293 NUDIX domain 33 147 6.7E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 K04M3_42550 15d76e2d1478d6ebf8bb8b9999db462b 149 SMART SM00422 15 83 9.3E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_42550 15d76e2d1478d6ebf8bb8b9999db462b 149 Gene3D G3DSA:1.10.1660.10 6 133 5.9E-25 T 12-10-2018 K04M3_42550 15d76e2d1478d6ebf8bb8b9999db462b 149 SUPERFAMILY SSF46955 15 136 4.76E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_42550 15d76e2d1478d6ebf8bb8b9999db462b 149 Pfam PF13411 MerR HTH family regulatory protein 15 82 7.3E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_10280 d033ffa354644e154f0a4b249bd4e040 322 SUPERFAMILY SSF56059 36 277 1.21E-19 T 12-10-2018 K04M3_10280 d033ffa354644e154f0a4b249bd4e040 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 1.0E-175 T 12-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein K04M3_10280 d033ffa354644e154f0a4b249bd4e040 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 2.8E-113 T 12-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 K04M3_42670 5b99c9c8b848f5fae67849efd52440d5 366 Gene3D G3DSA:3.20.20.70 1 365 1.2E-142 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_42670 5b99c9c8b848f5fae67849efd52440d5 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 6.4E-100 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 K04M3_42670 5b99c9c8b848f5fae67849efd52440d5 366 SUPERFAMILY SSF51395 3 364 4.58E-127 T 12-10-2018 K04M3_14870 ef867500ae3efb27d8e9fed02ba48cc5 156 PIRSF PIRSF008757 1 156 1.2E-52 T 12-10-2018 IPR010371 Uncharacterised protein family UPF0303 K04M3_14870 ef867500ae3efb27d8e9fed02ba48cc5 156 Pfam PF03928 Haem-degrading 20 145 4.9E-31 T 12-10-2018 IPR005624 Haem-degrading K04M3_14870 ef867500ae3efb27d8e9fed02ba48cc5 156 Gene3D G3DSA:3.30.450.150 1 155 1.9E-50 T 12-10-2018 IPR038084 GlcG-like domain superfamily K04M3_14870 ef867500ae3efb27d8e9fed02ba48cc5 156 SUPERFAMILY SSF143744 11 148 4.32E-25 T 12-10-2018 IPR038084 GlcG-like domain superfamily K04M3_20800 38b5db0eee272e97aec69a12cc414839 612 Gene3D G3DSA:3.40.190.10 19 321 3.2E-43 T 12-10-2018 K04M3_20800 38b5db0eee272e97aec69a12cc414839 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 489 3.2E-60 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain K04M3_20800 38b5db0eee272e97aec69a12cc414839 612 Gene3D G3DSA:3.10.105.10 322 548 1.5E-40 T 12-10-2018 K04M3_20800 38b5db0eee272e97aec69a12cc414839 612 SUPERFAMILY SSF53850 45 566 3.98E-92 T 12-10-2018 K04M3_20800 38b5db0eee272e97aec69a12cc414839 612 PIRSF PIRSF002741 2 574 6.8E-63 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 K04M3_37300 f41d9a6baeb4195173d38b21cf70e180 339 Pfam PF02628 Cytochrome oxidase assembly protein 7 315 3.4E-82 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 K04M3_04360 a02677141df3fe89115b773438d2e426 152 Pfam PF05258 Protein of unknown function (DUF721) 11 85 3.4E-12 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 Gene3D G3DSA:3.40.50.300 218 416 6.3E-48 T 12-10-2018 K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 SMART SM00487 22 221 1.2E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.1E-27 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 SUPERFAMILY SSF52540 74 359 5.24E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 SMART SM00490 257 338 4.6E-32 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 Pfam PF00270 DEAD/DEAH box helicase 27 194 3.1E-54 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_42030 16bd12ef072ad8ea2f6d11db05b077a2 419 Gene3D G3DSA:3.40.50.300 1 217 6.2E-77 T 12-10-2018 K04M3_08470 cea01ecd08db2967aaf9bfcc52c850aa 262 SUPERFAMILY SSF52540 4 217 3.09E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08470 cea01ecd08db2967aaf9bfcc52c850aa 262 Gene3D G3DSA:3.40.50.300 1 239 6.5E-56 T 12-10-2018 K04M3_08470 cea01ecd08db2967aaf9bfcc52c850aa 262 Pfam PF00005 ABC transporter 20 148 1.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_08470 cea01ecd08db2967aaf9bfcc52c850aa 262 SMART SM00382 29 199 1.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_35830 c2fbd805c7e65dc2a998265286988eeb 415 Pfam PF04932 O-Antigen ligase 185 342 1.6E-10 T 12-10-2018 IPR007016 O-antigen ligase-related K04M3_42960 2a2f42889f1e37523546738756b5103c 205 Gene3D G3DSA:1.10.150.240 19 88 5.5E-41 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 3.8E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.8E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 3.8E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 3.8E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 3.8E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 73 186 6.9E-14 T 12-10-2018 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 Gene3D G3DSA:3.40.50.1000 5 193 5.5E-41 T 12-10-2018 IPR023214 HAD superfamily K04M3_42960 2a2f42889f1e37523546738756b5103c 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 186 9.1E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 K04M3_42960 2a2f42889f1e37523546738756b5103c 205 SUPERFAMILY SSF56784 7 194 7.02E-36 T 12-10-2018 IPR036412 HAD-like superfamily K04M3_21990 74e89f3f4678378ebdfe886f20804807 273 SUPERFAMILY SSF81901 144 224 5.75E-5 T 12-10-2018 K04M3_21990 74e89f3f4678378ebdfe886f20804807 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 5.4E-75 T 12-10-2018 IPR021372 Protein of unknown function DUF2989 K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 SUPERFAMILY SSF51735 7 250 1.78E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 6.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.0E-52 T 12-10-2018 K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0043 T 12-10-2018 K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 Gene3D G3DSA:3.40.50.720 1 252 6.9E-70 T 12-10-2018 K04M3_38290 b05747b5b6c2c0701690edaa84388ca4 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 K04M3_00880 e47adda401d9feac6bb074bf78efaeaa 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.127 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 K04M3_00880 e47adda401d9feac6bb074bf78efaeaa 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.2E-21 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 K04M3_00880 e47adda401d9feac6bb074bf78efaeaa 81 Pfam PF02416 mttA/Hcf106 family 4 55 3.6E-13 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 K04M3_02840 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02840 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02840 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02840 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02840 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02840 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 12-10-2018 K04M3_39380 63f7c94ec66484aacdb5644fbc678c80 221 SUPERFAMILY SSF50249 9 184 3.77E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_39380 63f7c94ec66484aacdb5644fbc678c80 221 Gene3D G3DSA:2.40.50.140 7 197 4.3E-37 T 12-10-2018 K04M3_33700 4c1e09a54cdfe9075a3999ff4801087f 204 Pfam PF02630 SCO1/SenC 21 177 8.3E-30 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_33700 4c1e09a54cdfe9075a3999ff4801087f 204 SUPERFAMILY SSF52833 43 196 1.62E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_33700 4c1e09a54cdfe9075a3999ff4801087f 204 Gene3D G3DSA:3.40.30.10 20 198 4.7E-36 T 12-10-2018 K04M3_16430 025519a5036f34ad1186e8cce2fe3b0c 277 PIRSF PIRSF012524 1 277 2.3E-97 T 12-10-2018 IPR014464 Conserved virulence factor B K04M3_16430 025519a5036f34ad1186e8cce2fe3b0c 277 Pfam PF13509 S1 domain 4 63 6.8E-24 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain K04M3_16430 025519a5036f34ad1186e8cce2fe3b0c 277 Pfam PF13509 S1 domain 71 132 1.2E-4 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain K04M3_16430 025519a5036f34ad1186e8cce2fe3b0c 277 Gene3D G3DSA:1.10.10.10 215 277 8.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_04060 7024d091374c056c603946b0dc435b35 147 PIRSF PIRSF006318 1 136 3.0E-56 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 K04M3_04060 7024d091374c056c603946b0dc435b35 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 6.7E-47 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 K04M3_10400 945c63c289f698f515339ba68eb2aae8 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.0E-108 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_10400 945c63c289f698f515339ba68eb2aae8 378 PIRSF PIRSF000267 2 377 5.6E-123 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_10400 945c63c289f698f515339ba68eb2aae8 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.4E-171 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_43680 9d58ea36b397ab68be06bf7023042dd3 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 307 7.0E-144 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 K04M3_43680 9d58ea36b397ab68be06bf7023042dd3 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 1.1E-59 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 K04M3_43680 9d58ea36b397ab68be06bf7023042dd3 312 Gene3D G3DSA:3.40.190.10 28 289 2.9E-93 T 12-10-2018 K04M3_43680 9d58ea36b397ab68be06bf7023042dd3 312 Gene3D G3DSA:3.40.190.100 109 218 2.9E-93 T 12-10-2018 K04M3_43680 9d58ea36b397ab68be06bf7023042dd3 312 SUPERFAMILY SSF53850 20 296 1.61E-88 T 12-10-2018 K04M3_34340 f9793dcb41c1402477fc09065098b5d9 157 Pfam PF04982 HPP family 34 143 2.5E-33 T 12-10-2018 IPR007065 HPP K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.245 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 Gene3D G3DSA:3.40.640.10 47 298 1.4E-186 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 Gene3D G3DSA:3.90.1150.10 21 404 1.4E-186 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 SUPERFAMILY SSF53383 9 430 1.14E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 1.2E-174 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 PIRSF PIRSF000412 4 431 3.7E-168 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_42350 f1e4db295ce1e617894823245b5924e8 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 K04M3_10040 60364a8e375cfee196956a5e93a9975b 106 Gene3D G3DSA:3.30.1390.10 1 106 2.0E-46 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like K04M3_10040 60364a8e375cfee196956a5e93a9975b 106 SUPERFAMILY SSF54736 21 105 6.28E-33 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like K04M3_10040 60364a8e375cfee196956a5e93a9975b 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.083 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS K04M3_10040 60364a8e375cfee196956a5e93a9975b 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.9E-34 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 Pfam PF02378 Phosphotransferase system, EIIC 10 341 3.2E-63 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 SUPERFAMILY SSF55604 440 514 4.05E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 Pfam PF00367 phosphotransferase system, EIIB 444 474 2.2E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 453 470 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 Gene3D G3DSA:3.30.1360.60 436 516 4.5E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 500 6.2E-14 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 K04M3_44120 57366682bb8325dfbdbe35ef3f46d9d7 516 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 4 514 4.7E-209 T 12-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 K04M3_48360 90431f2a673b3614e13927e651c76ba3 160 SUPERFAMILY SSF141523 24 158 1.02E-23 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like K04M3_48360 90431f2a673b3614e13927e651c76ba3 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 6.9E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 K04M3_48360 90431f2a673b3614e13927e651c76ba3 160 Gene3D G3DSA:2.40.440.10 19 158 2.0E-16 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like K04M3_33230 a6c3bba3f566a73020be2004e293c596 307 Pfam PF01497 Periplasmic binding protein 52 280 1.2E-27 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain K04M3_33230 a6c3bba3f566a73020be2004e293c596 307 Gene3D G3DSA:3.40.50.1980 28 137 1.5E-27 T 12-10-2018 K04M3_33230 a6c3bba3f566a73020be2004e293c596 307 SUPERFAMILY SSF53807 31 291 3.73E-56 T 12-10-2018 K04M3_33230 a6c3bba3f566a73020be2004e293c596 307 Gene3D G3DSA:3.40.50.1980 139 307 1.3E-45 T 12-10-2018 K04M3_09330 dffd01b4bf76879bc785be7203accb3a 290 Gene3D G3DSA:3.10.450.240 166 290 2.3E-6 T 12-10-2018 K04M3_09330 dffd01b4bf76879bc785be7203accb3a 290 SUPERFAMILY SSF54427 169 289 4.03E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_09330 dffd01b4bf76879bc785be7203accb3a 290 Pfam PF04280 Tim44-like domain 168 289 5.6E-15 T 12-10-2018 IPR007379 Tim44-like domain K04M3_09330 dffd01b4bf76879bc785be7203accb3a 290 SMART SM00978 159 290 4.2E-37 T 12-10-2018 IPR007379 Tim44-like domain K04M3_29270 e30d936f718320ad6aaa35499025acdd 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 6.3E-28 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 K04M3_29270 e30d936f718320ad6aaa35499025acdd 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.3E-34 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 SUPERFAMILY SSF52833 40 181 4.49E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_45640 e7af38b22480e955d828c0128256edcb 181 PIRSF PIRSF000303 2 181 9.2E-54 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 Pfam PF00255 Glutathione peroxidase 40 134 1.9E-25 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 3.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 3.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 3.2E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 Gene3D G3DSA:3.40.30.10 26 181 7.0E-43 T 12-10-2018 K04M3_45640 e7af38b22480e955d828c0128256edcb 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 K04M3_21230 46530f4f93875c9746ca0438384f24c8 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.676 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein K04M3_21230 46530f4f93875c9746ca0438384f24c8 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 K04M3_21230 46530f4f93875c9746ca0438384f24c8 358 Gene3D G3DSA:3.40.50.300 80 336 1.2E-83 T 12-10-2018 K04M3_21230 46530f4f93875c9746ca0438384f24c8 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 3.0E-99 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 K04M3_21230 46530f4f93875c9746ca0438384f24c8 358 SUPERFAMILY SSF52540 87 318 7.43E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_05140 1435da2ca66152a6064f4786ab5a1d98 358 PIRSF PIRSF001361 1 354 2.1E-164 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 K04M3_05140 1435da2ca66152a6064f4786ab5a1d98 358 Pfam PF00793 DAHP synthetase I family 41 340 3.8E-105 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 K04M3_05140 1435da2ca66152a6064f4786ab5a1d98 358 Gene3D G3DSA:3.20.20.70 3 348 2.1E-157 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_05140 1435da2ca66152a6064f4786ab5a1d98 358 SUPERFAMILY SSF51569 8 345 5.34E-139 T 12-10-2018 K04M3_05140 1435da2ca66152a6064f4786ab5a1d98 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 2.4E-163 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 K04M3_13130 1d76248ab52dfda8c638749289370ffe 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 43.001 T 12-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 K04M3_13130 1d76248ab52dfda8c638749289370ffe 254 SUPERFAMILY SSF52540 15 231 4.94E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_13130 1d76248ab52dfda8c638749289370ffe 254 Gene3D G3DSA:3.40.50.300 6 253 1.2E-50 T 12-10-2018 K04M3_13130 1d76248ab52dfda8c638749289370ffe 254 SMART SM00382 21 216 1.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_13130 1d76248ab52dfda8c638749289370ffe 254 Pfam PF00005 ABC transporter 14 167 1.6E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_28670 592859488ee76b426ad8bc1937606054 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 63 8.3E-23 T 12-10-2018 IPR014318 Phage shock protein, PspG K04M3_28670 592859488ee76b426ad8bc1937606054 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 6.7E-24 T 12-10-2018 IPR014318 Phage shock protein, PspG K04M3_16240 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.3E-10 T 12-10-2018 K04M3_16240 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.3E-10 T 12-10-2018 K04M3_16240 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.3E-10 T 12-10-2018 K04M3_16240 622c528218ecbf866121db1a018d5339 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.3E-10 T 12-10-2018 K04M3_16240 622c528218ecbf866121db1a018d5339 546 Gene3D G3DSA:3.30.230.10 291 532 2.6E-92 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup K04M3_16240 622c528218ecbf866121db1a018d5339 546 Gene3D G3DSA:3.40.50.300 21 203 9.5E-13 T 12-10-2018 K04M3_16240 622c528218ecbf866121db1a018d5339 546 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 505 2.3E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 K04M3_16240 622c528218ecbf866121db1a018d5339 546 SUPERFAMILY SSF54211 314 506 4.93E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold K04M3_16240 622c528218ecbf866121db1a018d5339 546 Pfam PF13654 AAA domain 107 288 1.3E-23 T 12-10-2018 K04M3_45130 b8274a84a2873fcc4d6492c54c8a96d3 115 PIRSF PIRSF028226 1 115 5.2E-56 T 12-10-2018 IPR014176 Phasin, subfamily 3 K04M3_45130 b8274a84a2873fcc4d6492c54c8a96d3 115 Pfam PF09361 Phasin protein 8 108 1.1E-20 T 12-10-2018 IPR018968 Phasin K04M3_45130 b8274a84a2873fcc4d6492c54c8a96d3 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 3.0E-55 T 12-10-2018 IPR014176 Phasin, subfamily 3 K04M3_39020 78651a05fdfafc73d3e262644946564e 1172 Gene3D G3DSA:3.40.50.300 85 307 2.0E-5 T 12-10-2018 K04M3_39020 78651a05fdfafc73d3e262644946564e 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 5.5E-87 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain K04M3_39020 78651a05fdfafc73d3e262644946564e 1172 SUPERFAMILY SSF52540 123 288 4.16E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39020 78651a05fdfafc73d3e262644946564e 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1169 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF K04M3_39020 78651a05fdfafc73d3e262644946564e 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 7.3E-60 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal K04M3_39020 78651a05fdfafc73d3e262644946564e 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 503 803 5.4E-76 T 12-10-2018 IPR009612 ImcF-related K04M3_40480 09ef5fb3c694b761714fc200928d7365 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 2.1E-71 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 K04M3_40480 09ef5fb3c694b761714fc200928d7365 229 Gene3D G3DSA:1.10.3720.10 3 224 3.5E-58 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_40480 09ef5fb3c694b761714fc200928d7365 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 214 4.0E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_40480 09ef5fb3c694b761714fc200928d7365 229 SUPERFAMILY SSF161098 6 217 3.27E-48 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 Pfam PF06628 Catalase-related immune-responsive 416 474 1.4E-21 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 SUPERFAMILY SSF56634 3 478 1.96E-215 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 Pfam PF00199 Catalase 7 387 9.0E-191 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 Gene3D G3DSA:2.40.180.10 2 479 5.4E-231 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PRINTS PR00067 Catalase signature 83 101 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PRINTS PR00067 Catalase signature 320 346 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PRINTS PR00067 Catalase signature 104 121 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PRINTS PR00067 Catalase signature 123 141 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PRINTS PR00067 Catalase signature 20 43 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PRINTS PR00067 Catalase signature 288 315 1.1E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 PIRSF PIRSF038928 1 479 2.0E-222 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 SMART SM01060 7 391 5.3E-288 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_35740 a20e3aa07ed12c4fbc9d95e92d73fc65 479 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 K04M3_39180 ba1d9b23220eaf9b6b560e734976596a 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 9.8E-17 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 K04M3_39180 ba1d9b23220eaf9b6b560e734976596a 377 SUPERFAMILY SSF56300 1 320 8.62E-61 T 12-10-2018 K04M3_39180 ba1d9b23220eaf9b6b560e734976596a 377 Gene3D G3DSA:3.60.21.10 1 266 6.0E-81 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like K04M3_39180 ba1d9b23220eaf9b6b560e734976596a 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 6.8E-9 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain K04M3_39180 ba1d9b23220eaf9b6b560e734976596a 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 1.1E-58 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 K04M3_03020 37328ff5846faea29ea55ca1997d7afb 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 1.2E-84 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 K04M3_03020 37328ff5846faea29ea55ca1997d7afb 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 3.4E-106 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 Gene3D G3DSA:1.20.120.350 9 123 1.2E-14 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 SUPERFAMILY SSF81324 11 210 7.85E-45 T 12-10-2018 K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 PRINTS PR00169 Potassium channel signature 154 176 6.0E-5 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 PRINTS PR00169 Potassium channel signature 70 90 6.0E-5 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 PRINTS PR00169 Potassium channel signature 183 209 6.0E-5 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 Gene3D G3DSA:1.10.287.70 124 226 7.8E-25 T 12-10-2018 K04M3_03930 755a00f0dde39cdb7ff31f3aee07fc53 257 Pfam PF07885 Ion channel 131 210 1.8E-14 T 12-10-2018 IPR013099 Potassium channel domain K04M3_12550 54006e6fd4ffaac817dec48f847c39d7 225 Pfam PF04172 LrgB-like family 6 218 1.0E-69 T 12-10-2018 IPR007300 CidB/LrgB family K04M3_30480 f3e4f6d508627fa350891a1a591a3f16 190 SUPERFAMILY SSF52141 2 189 7.52E-59 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_30480 f3e4f6d508627fa350891a1a591a3f16 190 SMART SM00986 27 183 3.0E-31 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_30480 f3e4f6d508627fa350891a1a591a3f16 190 SMART SM00987 27 183 3.0E-31 T 12-10-2018 K04M3_30480 f3e4f6d508627fa350891a1a591a3f16 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 1.9E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_30480 f3e4f6d508627fa350891a1a591a3f16 190 Gene3D G3DSA:3.40.470.10 1 190 3.2E-75 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 K04M3_07930 c0b47143fb7c4c645fcc09b50beabf4f 153 SUPERFAMILY SSF141322 96 149 7.19E-6 T 12-10-2018 K04M3_07930 c0b47143fb7c4c645fcc09b50beabf4f 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 5.1E-25 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain K04M3_07930 c0b47143fb7c4c645fcc09b50beabf4f 153 Gene3D G3DSA:2.40.50.140 82 153 8.7E-10 T 12-10-2018 K04M3_44650 2855feae86af85ca7a01d62b42f28f6b 315 Gene3D G3DSA:3.40.50.12230 4 307 2.0E-35 T 12-10-2018 K04M3_44650 2855feae86af85ca7a01d62b42f28f6b 315 SUPERFAMILY SSF50486 205 288 8.24E-5 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 K04M3_44650 2855feae86af85ca7a01d62b42f28f6b 315 Pfam PF02911 Formyl transferase, C-terminal domain 202 283 7.8E-6 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_44650 2855feae86af85ca7a01d62b42f28f6b 315 Pfam PF00551 Formyl transferase 44 172 2.5E-9 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_44650 2855feae86af85ca7a01d62b42f28f6b 315 SUPERFAMILY SSF53328 8 189 1.26E-26 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 SMART SM00382 26 238 1.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 SMART SM00382 343 511 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 SUPERFAMILY SSF52540 333 517 6.42E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 Gene3D G3DSA:3.40.50.300 2 281 8.4E-57 T 12-10-2018 K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 Gene3D G3DSA:3.40.50.300 282 529 2.4E-50 T 12-10-2018 K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 SUPERFAMILY SSF52540 7 237 5.89E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 Pfam PF00005 ABC transporter 337 466 6.2E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_15820 69d430ba02b30ef78dfd88376a7a202c 530 Pfam PF00005 ABC transporter 18 184 2.8E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_06890 8aef3999897da2cb35dc410c50f5c4b7 506 Gene3D G3DSA:1.10.10.10 11 119 6.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_06890 8aef3999897da2cb35dc410c50f5c4b7 506 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 4.5E-11 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_06890 8aef3999897da2cb35dc410c50f5c4b7 506 SMART SM00862 31 111 1.2E-6 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_06890 8aef3999897da2cb35dc410c50f5c4b7 506 SUPERFAMILY SSF46894 9 112 1.22E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_05380 010c24343d0d2f10c97c6608e8710195 110 Gene3D G3DSA:3.30.429.10 1 110 8.5E-45 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily K04M3_05380 010c24343d0d2f10c97c6608e8710195 110 SUPERFAMILY SSF55331 1 110 1.25E-37 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily K04M3_05380 010c24343d0d2f10c97c6608e8710195 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.8E-38 T 12-10-2018 IPR015017 Protein of unknown function DUF1904 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 SUPERFAMILY SSF52540 1 208 1.44E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 7.1E-46 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 Gene3D G3DSA:1.10.8.60 143 212 2.7E-19 T 12-10-2018 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 Gene3D G3DSA:3.40.50.300 1 139 1.7E-49 T 12-10-2018 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 SUPERFAMILY SSF48019 211 331 1.53E-30 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 5.0E-31 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 Gene3D G3DSA:1.20.272.10 213 337 5.8E-39 T 12-10-2018 K04M3_07010 7c5a5fa48025024c7dfafe0f0d2f886c 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 1.1E-101 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 K04M3_09320 e35d932299a7a8508e41ef91de913d51 196 SUPERFAMILY SSF46689 5 79 1.89E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_09320 e35d932299a7a8508e41ef91de913d51 196 Pfam PF13305 WHG domain 93 172 6.9E-11 T 12-10-2018 IPR025996 WHG domain K04M3_09320 e35d932299a7a8508e41ef91de913d51 196 SUPERFAMILY SSF48498 82 195 1.38E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_09320 e35d932299a7a8508e41ef91de913d51 196 Gene3D G3DSA:1.10.357.10 1 191 1.0E-41 T 12-10-2018 K04M3_04150 6d85bdf676ec7e63464814bb0716b308 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 5.1E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 5.1E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 5.1E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 Gene3D G3DSA:2.70.98.90 61 330 1.6E-89 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 3.2E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 Pfam PF14849 YidC periplasmic domain 65 339 8.0E-83 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 8.5E-74 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.904 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 Pfam PF02096 60Kd inner membrane protein 351 530 9.6E-64 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 K04M3_32370 feeb105007cb9499bf11ba629a56cbcc 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.1E-110 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal K04M3_15640 c40e84010717f79ea231212670fd5a61 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 4.6E-43 T 12-10-2018 IPR020979 Uncharacterised protein family A0KLC6 K04M3_22100 69f40c91d0633ef8e21be83e0b164e1b 94 Gene3D G3DSA:3.30.70.100 1 94 1.9E-26 T 12-10-2018 K04M3_22100 69f40c91d0633ef8e21be83e0b164e1b 94 SUPERFAMILY SSF54909 1 93 1.57E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_22100 69f40c91d0633ef8e21be83e0b164e1b 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 71 3.8E-17 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain K04M3_10390 53d349d03604f484b896eac3c76298a8 528 PIRSF PIRSF006446 335 526 2.6E-33 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_10390 53d349d03604f484b896eac3c76298a8 528 PIRSF PIRSF006446 1 329 3.3E-115 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_10390 53d349d03604f484b896eac3c76298a8 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.4E-178 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 PRINTS PR01021 OMPA domain signature 84 106 1.5E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 PRINTS PR01021 OMPA domain signature 129 145 1.5E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 PRINTS PR01021 OMPA domain signature 114 129 1.5E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 SUPERFAMILY SSF103088 77 184 2.75E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 Gene3D G3DSA:3.30.1330.60 65 183 2.5E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 Pfam PF00691 OmpA family 83 178 3.5E-18 T 12-10-2018 IPR006665 OmpA-like domain K04M3_16620 116d5a2a1008e47948b812ed95a5f7f3 204 SUPERFAMILY SSF103647 15 72 6.28E-9 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 K04M3_13050 fe16ec7807ab1e093f21cdfbb7db8a22 229 SUPERFAMILY SSF51735 3 210 1.43E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_13050 fe16ec7807ab1e093f21cdfbb7db8a22 229 Pfam PF08732 HIM1 78 170 4.1E-9 T 12-10-2018 IPR014843 Protein Him1/Fmp52 K04M3_13050 fe16ec7807ab1e093f21cdfbb7db8a22 229 Gene3D G3DSA:3.40.50.720 1 227 3.9E-48 T 12-10-2018 K04M3_13160 1522d51dcc48545a309e900dbdac84a8 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 K04M3_13160 1522d51dcc48545a309e900dbdac84a8 407 Pfam PF07690 Major Facilitator Superfamily 16 352 5.7E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_13160 1522d51dcc48545a309e900dbdac84a8 407 Gene3D G3DSA:1.20.1250.20 5 389 5.9E-44 T 12-10-2018 K04M3_13160 1522d51dcc48545a309e900dbdac84a8 407 SUPERFAMILY SSF103473 9 394 2.09E-53 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 SUPERFAMILY SSF118215 13 401 3.27E-110 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 Gene3D G3DSA:1.10.3860.10 2 417 7.4E-118 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 Pfam PF00375 Sodium:dicarboxylate symporter family 13 401 6.0E-119 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 228 247 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 7.7E-53 T 12-10-2018 K04M3_20260 aefaf3b9c61cdba58e99e7006a1df9dd 417 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.7E-53 T 12-10-2018 K04M3_40760 e6d529479b650f99d9011199649e5485 433 SUPERFAMILY SSF50494 13 181 3.79E-14 T 12-10-2018 IPR009003 Peptidase S1, PA clan K04M3_40760 e6d529479b650f99d9011199649e5485 433 Gene3D G3DSA:2.40.10.10 15 93 1.1E-7 T 12-10-2018 K04M3_40760 e6d529479b650f99d9011199649e5485 433 Pfam PF13365 Trypsin-like peptidase domain 17 161 8.5E-8 T 12-10-2018 K04M3_40760 e6d529479b650f99d9011199649e5485 433 Gene3D G3DSA:2.40.10.10 94 169 1.1E-7 T 12-10-2018 K04M3_10110 60108145d2512b73d836eedb62438562 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 5.1E-42 T 12-10-2018 IPR019633 Protein of unknown function DUF2498 K04M3_10110 60108145d2512b73d836eedb62438562 82 Gene3D G3DSA:1.10.1900.30 8 76 9.2E-36 T 12-10-2018 IPR038191 YciN superfamily K04M3_10850 813a45148e3f7f1fc7f2618abffa4637 300 Pfam PF11860 N-acetylmuramidase 127 293 1.2E-63 T 12-10-2018 IPR024408 N-acetylmuramidase K04M3_49200 0ffd85ef1e6d23a72852d4a1eae2d279 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 115 1.4E-9 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 K04M3_49200 0ffd85ef1e6d23a72852d4a1eae2d279 131 SUPERFAMILY SSF51316 11 130 3.24E-31 T 12-10-2018 IPR011057 Mss4-like superfamily K04M3_49200 0ffd85ef1e6d23a72852d4a1eae2d279 131 Gene3D G3DSA:2.170.150.70 15 131 1.1E-37 T 12-10-2018 K04M3_24050 b0592a85690a290a0f22d48d6eff4b78 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 2.9E-35 T 12-10-2018 IPR023376 YqcC-like domain K04M3_24050 b0592a85690a290a0f22d48d6eff4b78 104 PIRSF PIRSF006257 1 104 2.9E-42 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 K04M3_24050 b0592a85690a290a0f22d48d6eff4b78 104 Gene3D G3DSA:1.20.1440.40 1 104 1.0E-34 T 12-10-2018 IPR036814 YqcC-like superfamily K04M3_24050 b0592a85690a290a0f22d48d6eff4b78 104 SUPERFAMILY SSF158452 1 103 2.62E-38 T 12-10-2018 IPR036814 YqcC-like superfamily K04M3_16490 9dfc67c3068c97d388ef1092faee2677 342 Gene3D G3DSA:3.40.190.10 130 225 9.8E-51 T 12-10-2018 K04M3_16490 9dfc67c3068c97d388ef1092faee2677 342 SMART SM00062 38 267 4.8E-53 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_16490 9dfc67c3068c97d388ef1092faee2677 342 Gene3D G3DSA:3.40.190.10 28 257 9.8E-51 T 12-10-2018 K04M3_16490 9dfc67c3068c97d388ef1092faee2677 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.1E-29 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_16490 9dfc67c3068c97d388ef1092faee2677 342 SUPERFAMILY SSF53850 29 258 1.46E-48 T 12-10-2018 K04M3_02640 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02640 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 5 200 4.0E-70 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_02640 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_02640 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 K04M3_02640 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 SUPERFAMILY SSF47616 165 313 6.96E-36 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 SUPERFAMILY SSF52833 31 149 1.42E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 Gene3D G3DSA:1.20.1050.10 170 315 2.7E-71 T 12-10-2018 K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 Gene3D G3DSA:3.40.30.130 1 169 2.1E-66 T 12-10-2018 K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.9E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 PIRSF PIRSF015753 5 312 5.4E-136 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 K04M3_21420 910275589d791464f7c8f4ee1ce7f314 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 4.0E-13 T 12-10-2018 K04M3_24800 f0978a44f361ad7dca58c36715e8db53 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 117 7.7E-16 T 12-10-2018 IPR003111 Lon, substrate-binding domain K04M3_24800 f0978a44f361ad7dca58c36715e8db53 198 Gene3D G3DSA:2.30.130.40 1 111 5.4E-30 T 12-10-2018 K04M3_24800 f0978a44f361ad7dca58c36715e8db53 198 SMART SM00464 3 190 0.0063 T 12-10-2018 IPR003111 Lon, substrate-binding domain K04M3_24800 f0978a44f361ad7dca58c36715e8db53 198 SUPERFAMILY SSF88697 3 189 4.97E-46 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 Gene3D G3DSA:3.40.50.2000 5 474 5.2E-195 T 12-10-2018 K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 SUPERFAMILY SSF53756 8 815 0.0 T 12-10-2018 K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 PIRSF PIRSF000460 1 817 5.0E-215 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 K04M3_33740 38cb2b0741706507ae220f5f41ab6dd1 817 Gene3D G3DSA:3.40.50.2000 475 797 2.7E-139 T 12-10-2018 K04M3_42100 0818f2867b61799351b86441064054e6 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 3.1E-12 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB K04M3_42100 0818f2867b61799351b86441064054e6 434 SUPERFAMILY SSF53613 34 417 1.57E-45 T 12-10-2018 IPR029056 Ribokinase-like K04M3_24640 ba7cfad94cdafa5a0160b7b1ec690615 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM K04M3_24620 ce5db0474aa716618e4e945fd0e5f161 77 Gene3D G3DSA:1.10.10.1130 1 77 1.7E-30 T 12-10-2018 K04M3_24620 ce5db0474aa716618e4e945fd0e5f161 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.2E-30 T 12-10-2018 IPR021250 Protein of unknown function DUF2789 K04M3_24300 04a6e293b85a786ef05f8d8f6975afb4 807 SUPERFAMILY SSF56349 550 682 7.06E-6 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 K04M3_46240 798dd168d542b4e7670d95fa0544f847 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 8.9E-61 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 SUPERFAMILY SSF50447 1 82 5.3E-14 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 SMART SM00863 166 208 3.2E-6 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 SUPERFAMILY SSF55186 84 210 5.49E-26 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 Gene3D G3DSA:3.30.980.10 84 212 2.3E-27 T 12-10-2018 K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 Gene3D G3DSA:2.40.30.130 1 83 7.1E-16 T 12-10-2018 K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 Pfam PF01411 tRNA synthetases class II (A) 12 87 6.0E-8 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 K04M3_17990 288033de2e9f84ee692009b12d3b2fe5 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 8.5E-6 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 K04M3_06560 8b6a7bc43bc9282454d7266c75ac3040 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 K04M3_06560 8b6a7bc43bc9282454d7266c75ac3040 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.022 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 K04M3_06560 8b6a7bc43bc9282454d7266c75ac3040 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.3E-73 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 K04M3_08080 679ba7265baf80c43e1965b21e4f71fb 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 6.3E-70 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 K04M3_27930 89b94a93205aeab60b0e4c87fdbdab79 212 Pfam PF05494 MlaC protein 33 200 8.3E-47 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC K04M3_27930 89b94a93205aeab60b0e4c87fdbdab79 212 PIRSF PIRSF004649 1 212 2.5E-58 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC K04M3_27930 89b94a93205aeab60b0e4c87fdbdab79 212 Gene3D G3DSA:3.10.450.710 25 204 1.3E-38 T 12-10-2018 K04M3_40910 879a3618c713f64cad2fb8c794d2c932 382 Pfam PF02486 Replication initiation factor 183 360 1.8E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 K04M3_41420 879a3618c713f64cad2fb8c794d2c932 382 Pfam PF02486 Replication initiation factor 183 360 1.8E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 K04M3_42220 b9f0b3d3eebc0d4a6c2ed257cda9f89e 177 Pfam PF13275 S4 domain 25 86 9.9E-22 T 12-10-2018 K04M3_42220 b9f0b3d3eebc0d4a6c2ed257cda9f89e 177 Gene3D G3DSA:3.10.290.10 14 88 5.8E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 K04M3_42220 b9f0b3d3eebc0d4a6c2ed257cda9f89e 177 SUPERFAMILY SSF55174 14 87 5.1E-17 T 12-10-2018 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 Pfam PF00816 H-NS histone family 33 129 7.0E-20 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 Gene3D G3DSA:4.10.430.10 92 135 1.6E-25 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 PIRSF PIRSF002096 1 135 2.2E-55 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 Gene3D G3DSA:1.10.287.1050 1 83 6.5E-30 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 12-10-2018 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 SUPERFAMILY SSF81273 2 58 6.08E-17 T 12-10-2018 K04M3_11080 d97af8c6a0c4c0f5d554eb6fe7473d95 135 SMART SM00528 88 135 3.2E-24 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 K04M3_36760 967ece4911f16d486448a9e026e36d76 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 9.9E-23 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 K04M3_36760 967ece4911f16d486448a9e026e36d76 130 Gene3D G3DSA:3.30.1330.40 16 129 4.4E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_36760 967ece4911f16d486448a9e026e36d76 130 SUPERFAMILY SSF55298 18 127 2.83E-31 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 SUPERFAMILY SSF53850 88 304 1.81E-38 T 12-10-2018 K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 Gene3D G3DSA:3.40.190.10 163 272 5.0E-65 T 12-10-2018 K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 Pfam PF03466 LysR substrate binding domain 89 301 1.6E-41 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 Gene3D G3DSA:3.40.190.10 91 299 5.0E-65 T 12-10-2018 K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 Gene3D G3DSA:1.10.10.10 3 88 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 SUPERFAMILY SSF46785 4 111 9.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_46110 9811777c8bee81c2868f3f600487d51b 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_48180 7067ed09ae5796a44225bfced7c933d4 291 SUPERFAMILY SSF81345 15 281 4.32E-34 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_48180 7067ed09ae5796a44225bfced7c933d4 291 Gene3D G3DSA:1.10.3470.10 77 287 1.0E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_48180 7067ed09ae5796a44225bfced7c933d4 291 Pfam PF00950 ABC 3 transport family 22 285 2.7E-55 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 K04M3_03840 f97dc54d89a4d8d5508615cacecdecf3 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.7E-82 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 K04M3_03840 f97dc54d89a4d8d5508615cacecdecf3 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.5E-74 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 K04M3_03840 f97dc54d89a4d8d5508615cacecdecf3 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.656 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 K04M3_31510 1b1c6cbbc448b4178383d99877e80e0d 224 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.7E-38 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 K04M3_31510 1b1c6cbbc448b4178383d99877e80e0d 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 2.1E-62 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 K04M3_31510 1b1c6cbbc448b4178383d99877e80e0d 224 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.539 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 K04M3_42170 300633dc56715cf9b7d54125046ad649 244 SMART SM00382 32 215 9.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_42170 300633dc56715cf9b7d54125046ad649 244 Pfam PF00005 ABC transporter 23 167 1.7E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_42170 300633dc56715cf9b7d54125046ad649 244 PIRSF PIRSF039085 4 243 1.6E-102 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 K04M3_42170 300633dc56715cf9b7d54125046ad649 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_42170 300633dc56715cf9b7d54125046ad649 244 Gene3D G3DSA:3.40.50.300 5 244 1.9E-77 T 12-10-2018 K04M3_42170 300633dc56715cf9b7d54125046ad649 244 SUPERFAMILY SSF52540 8 237 8.76E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_45110 4feb8da6f298e30394b37eecab3b4b6c 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 3.4E-26 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 K04M3_45110 4feb8da6f298e30394b37eecab3b4b6c 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 8.4E-26 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 K04M3_03520 291ff519aefcc2ea707253d4defbb2d8 348 SUPERFAMILY SSF53756 1 300 2.46E-11 T 12-10-2018 K04M3_03520 291ff519aefcc2ea707253d4defbb2d8 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.8E-37 T 12-10-2018 K04M3_03520 291ff519aefcc2ea707253d4defbb2d8 348 Gene3D G3DSA:3.40.50.2000 201 315 4.5E-6 T 12-10-2018 K04M3_03520 291ff519aefcc2ea707253d4defbb2d8 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 6.9E-106 T 12-10-2018 IPR005262 Conserved hypothetical protein CHP00661 K04M3_01740 405cea244f5406cfdc72da579bb50dae 311 SMART SM00672 108 302 6.0E-4 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein K04M3_01740 405cea244f5406cfdc72da579bb50dae 311 Pfam PF05686 Glycosyl transferase family 90 140 286 2.0E-15 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein K04M3_50440 0aa7308058f540a7ed417718e919bde5 419 Pfam PF00145 C-5 cytosine-specific DNA methylase 86 257 2.6E-18 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 K04M3_50440 0aa7308058f540a7ed417718e919bde5 419 SUPERFAMILY SSF53335 8 280 8.31E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_50440 0aa7308058f540a7ed417718e919bde5 419 Gene3D G3DSA:3.40.50.150 3 236 2.2E-27 T 12-10-2018 K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PIRSF PIRSF002869 1 517 1.9E-148 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 510 1.3E-136 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.833 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_04990 fb2d868d4c754715ca7d46c2896edc34 520 Pfam PF03023 MviN-like protein 30 483 2.9E-144 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ K04M3_49070 4160e308ffb9dfec75ca5d36be9b00fd 206 Gene3D G3DSA:3.40.30.10 1 206 6.5E-44 T 12-10-2018 K04M3_49070 4160e308ffb9dfec75ca5d36be9b00fd 206 Pfam PF01323 DSBA-like thioredoxin domain 3 182 3.4E-10 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 K04M3_49070 4160e308ffb9dfec75ca5d36be9b00fd 206 SUPERFAMILY SSF52833 3 204 2.12E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_49260 daafa4e24a31df5040c63578d25cb3b9 147 Pfam PF07681 DoxX 18 103 8.8E-24 T 12-10-2018 IPR032808 DoxX family K04M3_31330 cddb501b0535b6b1ad395139699648f2 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 1.8E-107 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX K04M3_38430 66ea5d57598bc5a3b0ccb3ad67108608 125 SUPERFAMILY SSF54427 4 115 7.43E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_38430 66ea5d57598bc5a3b0ccb3ad67108608 125 Pfam PF12680 SnoaL-like domain 12 107 8.1E-14 T 12-10-2018 IPR037401 SnoaL-like domain K04M3_38430 66ea5d57598bc5a3b0ccb3ad67108608 125 Gene3D G3DSA:3.10.450.50 1 125 3.3E-33 T 12-10-2018 K04M3_08910 d0bb6f1347a05f17beeb0aedfc57ea09 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 7.1E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain K04M3_08910 d0bb6f1347a05f17beeb0aedfc57ea09 86 SUPERFAMILY SSF47336 5 85 7.33E-14 T 12-10-2018 IPR036736 ACP-like superfamily K04M3_08910 d0bb6f1347a05f17beeb0aedfc57ea09 86 Gene3D G3DSA:1.10.1200.10 3 86 3.7E-21 T 12-10-2018 IPR036736 ACP-like superfamily K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.9E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 SUPERFAMILY SSF52172 1 124 1.07E-26 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 SUPERFAMILY SSF46894 125 198 4.08E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 Gene3D G3DSA:3.40.50.12740 2 202 2.9E-51 T 12-10-2018 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 SMART SM00448 2 112 1.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 SMART SM00421 140 197 6.9E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_40240 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_51490 5619c3fff09f2b864c74da193935e388 173 SUPERFAMILY SSF55729 71 141 2.42E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_51490 5619c3fff09f2b864c74da193935e388 173 Pfam PF13508 Acetyltransferase (GNAT) domain 72 141 2.4E-6 T 12-10-2018 IPR000182 GNAT domain K04M3_51490 5619c3fff09f2b864c74da193935e388 173 Gene3D G3DSA:3.40.630.30 32 151 1.5E-7 T 12-10-2018 K04M3_02140 8788939bffc1c81407a4edcf11a903cf 439 Pfam PF01943 Polysaccharide biosynthesis protein 5 217 1.0E-12 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 K04M3_44700 420fd072d06e70eed959459e8508e860 563 Gene3D G3DSA:3.40.462.20 256 529 2.3E-75 T 12-10-2018 K04M3_44700 420fd072d06e70eed959459e8508e860 563 SUPERFAMILY SSF56176 71 252 1.87E-45 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 K04M3_44700 420fd072d06e70eed959459e8508e860 563 Pfam PF01565 FAD binding domain 90 221 1.0E-27 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 K04M3_44700 420fd072d06e70eed959459e8508e860 563 Gene3D G3DSA:3.30.465.40 72 551 2.3E-75 T 12-10-2018 K04M3_18300 67206ba4034c374f10e846d1b0e3c503 115 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 54 114 2.1E-19 T 12-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon K04M3_18300 67206ba4034c374f10e846d1b0e3c503 115 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 5 24 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type K04M3_18300 67206ba4034c374f10e846d1b0e3c503 115 SMART SM00547 3 27 0.0037 T 12-10-2018 IPR001876 Zinc finger, RanBP2-type K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 Gene3D G3DSA:1.20.120.1460 239 314 1.6E-23 T 12-10-2018 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 SUPERFAMILY SSF51395 1 308 2.13E-71 T 12-10-2018 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 50.421 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 Pfam PF01207 Dihydrouridine synthase (Dus) 1 304 5.1E-94 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 Gene3D G3DSA:3.20.20.70 1 234 2.4E-69 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 6.1E-158 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 K04M3_28680 f7e4cf08dc3bd56bd744ade50e1d1be8 315 PIRSF PIRSF006621 1 312 7.3E-72 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 K04M3_02570 f821cde1aedec72677c9e70dded24080 182 Pfam PF05036 Sporulation related domain 108 177 2.6E-14 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_02570 f821cde1aedec72677c9e70dded24080 182 SUPERFAMILY SSF110997 107 179 5.1E-17 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_02570 f821cde1aedec72677c9e70dded24080 182 Gene3D G3DSA:3.30.70.1070 102 180 6.6E-28 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_02570 f821cde1aedec72677c9e70dded24080 182 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 101 179 1.8E-32 T 12-10-2018 IPR011930 Cell division protein FtsN GO:0005515 K04M3_18550 e5f8d37379edcec53d18d8ce44de6963 150 SUPERFAMILY SSF81324 61 143 1.19E-7 T 12-10-2018 K04M3_18550 e5f8d37379edcec53d18d8ce44de6963 150 Gene3D G3DSA:1.10.287.70 36 148 1.7E-6 T 12-10-2018 K04M3_18550 e5f8d37379edcec53d18d8ce44de6963 150 Pfam PF07885 Ion channel 77 141 9.5E-8 T 12-10-2018 IPR013099 Potassium channel domain K04M3_47540 074051314df001830a62621856a6787a 199 Gene3D G3DSA:1.10.357.10 69 190 9.9E-11 T 12-10-2018 K04M3_47540 074051314df001830a62621856a6787a 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 2.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 K04M3_47540 074051314df001830a62621856a6787a 199 SUPERFAMILY SSF46689 4 82 8.21E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_47540 074051314df001830a62621856a6787a 199 Gene3D G3DSA:1.10.10.60 2 65 1.7E-20 T 12-10-2018 K04M3_47540 074051314df001830a62621856a6787a 199 SUPERFAMILY SSF48498 79 176 1.27E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily K04M3_05950 9cf59c91867a2273f88d3bf1a764bd8b 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 57 1.3E-15 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA K04M3_05950 9cf59c91867a2273f88d3bf1a764bd8b 74 SUPERFAMILY SSF46955 9 66 2.38E-7 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_19760 7f20b45a874c6bcb8da97da36b1a9550 360 SUPERFAMILY SSF82171 67 307 2.86E-9 T 12-10-2018 K04M3_19760 7f20b45a874c6bcb8da97da36b1a9550 360 PIRSF PIRSF028101 4 360 3.5E-164 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 K04M3_19760 7f20b45a874c6bcb8da97da36b1a9550 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 8.2E-112 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 K04M3_38980 66ee8f2eddb2cc8f3bd300d14a243e0b 397 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 394 7.5E-110 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein K04M3_38980 66ee8f2eddb2cc8f3bd300d14a243e0b 397 Pfam PF00498 FHA domain 32 101 4.5E-15 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 K04M3_38980 66ee8f2eddb2cc8f3bd300d14a243e0b 397 SMART SM00240 31 82 1.9E-8 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 K04M3_38980 66ee8f2eddb2cc8f3bd300d14a243e0b 397 SUPERFAMILY SSF49879 28 109 4.78E-21 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 K04M3_38980 66ee8f2eddb2cc8f3bd300d14a243e0b 397 Gene3D G3DSA:2.60.200.20 4 118 1.5E-20 T 12-10-2018 K04M3_10250 a31a756eb36e06f47b3cdddb98064dcd 241 Pfam PF04288 MukE-like family 10 235 1.7E-118 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 K04M3_10250 a31a756eb36e06f47b3cdddb98064dcd 241 Gene3D G3DSA:1.10.10.2250 1 78 2.2E-34 T 12-10-2018 K04M3_10250 a31a756eb36e06f47b3cdddb98064dcd 241 Gene3D G3DSA:1.10.10.2260 88 194 4.1E-49 T 12-10-2018 K04M3_10250 a31a756eb36e06f47b3cdddb98064dcd 241 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.552 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 K04M3_46330 03a171d181b303126852f498b4335f54 292 SMART SM00421 226 283 4.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_46330 03a171d181b303126852f498b4335f54 292 Gene3D G3DSA:1.10.10.10 198 288 7.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_46330 03a171d181b303126852f498b4335f54 292 Pfam PF00196 Bacterial regulatory proteins, luxR family 228 282 3.0E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_46330 03a171d181b303126852f498b4335f54 292 SUPERFAMILY SSF46894 218 286 1.46E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_46330 03a171d181b303126852f498b4335f54 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 229 243 1.6E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_46330 03a171d181b303126852f498b4335f54 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 259 271 1.6E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_46330 03a171d181b303126852f498b4335f54 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 243 259 1.6E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 K04M3_36070 16f0d5f04d2839c40214c86ba03f231a 369 SUPERFAMILY SSF69593 89 244 1.31E-8 T 12-10-2018 K04M3_36070 16f0d5f04d2839c40214c86ba03f231a 369 Pfam PF01553 Acyltransferase 92 194 1.1E-9 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 K04M3_14700 038cc3e9c052d13252296e47d4766eb5 473 SUPERFAMILY SSF55021 398 463 9.16E-9 T 12-10-2018 K04M3_14700 038cc3e9c052d13252296e47d4766eb5 473 Gene3D G3DSA:3.30.2130.10 311 465 5.1E-9 T 12-10-2018 K04M3_14700 038cc3e9c052d13252296e47d4766eb5 473 Gene3D G3DSA:3.40.1160.10 3 307 1.6E-57 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_14700 038cc3e9c052d13252296e47d4766eb5 473 Pfam PF00696 Amino acid kinase family 4 293 1.6E-23 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 K04M3_14700 038cc3e9c052d13252296e47d4766eb5 473 SUPERFAMILY SSF53633 5 307 8.25E-55 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 Pfam PF08238 Sel1 repeat 74 106 0.19 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 SUPERFAMILY SSF81901 64 177 8.24E-22 T 12-10-2018 K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 Gene3D G3DSA:1.25.40.10 35 211 1.2E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 SMART SM00671 72 107 0.011 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 SMART SM00671 108 143 3.2E-5 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_29450 a32d466f68cbcb00f8a036ec47b9dc41 211 SMART SM00671 144 179 38.0 T 12-10-2018 IPR006597 Sel1-like repeat K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 SUPERFAMILY SSF53686 96 438 9.47E-53 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 264.627 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 9.6E-220 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 396 1.0E-57 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 Gene3D G3DSA:3.40.50.1100 24 438 9.1E-194 T 12-10-2018 K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 Gene3D G3DSA:3.40.50.1100 116 238 9.1E-194 T 12-10-2018 K04M3_12050 3ef1227c1f3523aea0ebea1db99ab25e 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 K04M3_04480 da3fd45dfff0834f892d7058a9e8e3fb 317 Pfam PF03186 CobD/Cbib protein 19 286 5.2E-29 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 K04M3_41690 7aa8ad2b5196674b76a0c3c041a48ae4 479 SUPERFAMILY SSF51905 9 298 2.95E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_41690 7aa8ad2b5196674b76a0c3c041a48ae4 479 SUPERFAMILY SSF51905 13 135 7.77E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_41690 7aa8ad2b5196674b76a0c3c041a48ae4 479 Gene3D G3DSA:3.50.50.60 1 82 8.3E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_41690 7aa8ad2b5196674b76a0c3c041a48ae4 479 Pfam PF01266 FAD dependent oxidoreductase 12 396 9.3E-9 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 K04M3_48540 b166d0d32294b8701ada4737074f3550 266 Gene3D G3DSA:1.10.3720.10 63 260 1.2E-26 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_48540 b166d0d32294b8701ada4737074f3550 266 SUPERFAMILY SSF161098 68 253 4.06E-33 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_48540 b166d0d32294b8701ada4737074f3550 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 3.4E-32 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_39330 a2854f0d6238e18a39e6637cc4479294 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 4.9E-13 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 SUPERFAMILY SSF46626 6 105 1.23E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 Gene3D G3DSA:1.10.760.10 109 205 2.9E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 Pfam PF00034 Cytochrome c 25 103 1.4E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 Pfam PF00034 Cytochrome c 116 201 1.8E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 SUPERFAMILY SSF46626 114 203 3.15E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 PIRSF PIRSF000005 1 205 3.4E-65 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 K04M3_00970 637837b0cdbb02c71d120458de9c200e 205 Gene3D G3DSA:1.10.760.10 19 108 2.7E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_08500 695bd6eb5dcd03804cafb035c0b61c0d 75 SMART SM00899 1 74 1.3E-23 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 K04M3_08500 695bd6eb5dcd03804cafb035c0b61c0d 75 Gene3D G3DSA:2.30.30.90 1 75 8.9E-24 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain K04M3_08500 695bd6eb5dcd03804cafb035c0b61c0d 75 Pfam PF04023 FeoA domain 1 74 4.7E-19 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 K04M3_08500 695bd6eb5dcd03804cafb035c0b61c0d 75 SUPERFAMILY SSF50037 4 74 4.58E-19 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 SUPERFAMILY SSF53383 17 437 1.04E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 6.6E-9 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 9.1E-180 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.81 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 Gene3D G3DSA:3.90.1150.10 760 893 2.7E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 Gene3D G3DSA:3.40.640.10 522 748 4.6E-59 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 Gene3D G3DSA:3.40.640.10 95 353 9.3E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_42370 f4432233fa5d1c3eb3c32a8bd8694790 954 SUPERFAMILY SSF53383 453 947 3.93E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_46250 a7368ce5f5f0aef83c224c3238c1d362 204 PIRSF PIRSF006324 1 204 7.9E-50 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_46250 a7368ce5f5f0aef83c224c3238c1d362 204 Pfam PF01810 LysE type translocator 15 202 6.8E-25 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 12-10-2018 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 K04M3_29130 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold K04M3_29130 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_07780 c6047c6ab7fc32282eab8411569dd516 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 4.5E-95 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 K04M3_07780 c6047c6ab7fc32282eab8411569dd516 397 SUPERFAMILY SSF64518 3 397 7.59E-69 T 12-10-2018 K04M3_07780 c6047c6ab7fc32282eab8411569dd516 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.0E-13 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 K04M3_07780 c6047c6ab7fc32282eab8411569dd516 397 Gene3D G3DSA:1.20.1330.10 268 372 3.1E-9 T 12-10-2018 K04M3_07780 c6047c6ab7fc32282eab8411569dd516 397 Gene3D G3DSA:1.20.1330.10 42 234 4.3E-34 T 12-10-2018 K04M3_51190 6b9a4cfd19b5922a412a62b263993232 212 SUPERFAMILY SSF53955 64 205 1.23E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_51190 6b9a4cfd19b5922a412a62b263993232 212 Gene3D G3DSA:1.10.530.10 70 212 4.6E-5 T 12-10-2018 K04M3_03360 ea2eeb0e9fc9f253a0056900e2b9c928 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 5.8E-38 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 Gene3D G3DSA:2.40.420.20 311 380 9.9E-108 T 12-10-2018 K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 SUPERFAMILY SSF111369 60 306 1.14E-81 T 12-10-2018 K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 Gene3D G3DSA:2.40.30.170 60 310 9.9E-108 T 12-10-2018 K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 Gene3D G3DSA:1.10.287.470 107 180 9.9E-108 T 12-10-2018 K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 382 3.9E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 Gene3D G3DSA:2.40.50.100 72 216 9.9E-108 T 12-10-2018 K04M3_10660 82233ada3d01797eef0f8d11a772e36c 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 300 8.0E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain K04M3_11960 4121559f109fb3ea5a6c13ced6259746 301 Pfam PF03956 Lysine exporter LysO 112 297 1.1E-52 T 12-10-2018 IPR005642 Lysine exporter LysO K04M3_11960 4121559f109fb3ea5a6c13ced6259746 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 1.0E-68 T 12-10-2018 IPR005642 Lysine exporter LysO K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 6.8E-174 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 SUPERFAMILY SSF103088 158 287 2.09E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 Pfam PF00691 OmpA family 187 282 2.4E-20 T 12-10-2018 IPR006665 OmpA-like domain K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 Gene3D G3DSA:3.30.1330.60 176 293 4.0E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 Gene3D G3DSA:2.60.40.2540 22 175 2.4E-58 T 12-10-2018 K04M3_21680 4c06ee33ce7977607a56ee698d8b1e5f 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 K04M3_07760 06029eacc73f98f926326d5117583eed 307 PRINTS PR01002 Flagellar protein FlgJ signature 30 53 1.4E-28 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 PRINTS PR01002 Flagellar protein FlgJ signature 78 100 1.4E-28 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 PRINTS PR01002 Flagellar protein FlgJ signature 222 243 1.4E-28 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 PRINTS PR01002 Flagellar protein FlgJ signature 181 199 1.4E-28 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 PRINTS PR01002 Flagellar protein FlgJ signature 244 265 1.4E-28 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 PRINTS PR01002 Flagellar protein FlgJ signature 287 305 1.4E-28 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 Pfam PF10135 Rod binding protein 52 101 3.0E-15 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal K04M3_07760 06029eacc73f98f926326d5117583eed 307 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 168 304 2.4E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 K04M3_07760 06029eacc73f98f926326d5117583eed 307 Gene3D G3DSA:2.10.70.40 196 247 4.3E-46 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 9 304 1.1E-126 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 K04M3_07760 06029eacc73f98f926326d5117583eed 307 Gene3D G3DSA:1.10.530.10 162 300 4.3E-46 T 12-10-2018 K04M3_07760 06029eacc73f98f926326d5117583eed 307 SMART SM00047 147 306 2.3E-50 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 K04M3_19500 53c2c5ba378ca1dc244194dc38148f69 571 SUPERFAMILY SSF141868 358 567 1.06E-46 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_19500 53c2c5ba378ca1dc244194dc38148f69 571 Pfam PF00563 EAL domain 358 567 7.2E-40 T 12-10-2018 IPR001633 EAL domain K04M3_19500 53c2c5ba378ca1dc244194dc38148f69 571 SMART SM00052 343 570 8.3E-14 T 12-10-2018 IPR001633 EAL domain K04M3_19500 53c2c5ba378ca1dc244194dc38148f69 571 Gene3D G3DSA:3.20.20.450 349 570 7.9E-46 T 12-10-2018 IPR035919 EAL domain superfamily K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 PRINTS PR01009 Flagellar M-ring protein signature 130 148 6.4E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 PRINTS PR01009 Flagellar M-ring protein signature 350 374 6.4E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 PRINTS PR01009 Flagellar M-ring protein signature 162 176 6.4E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 PRINTS PR01009 Flagellar M-ring protein signature 206 224 6.4E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 PRINTS PR01009 Flagellar M-ring protein signature 277 295 6.4E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 28 561 4.6E-73 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 Gene3D G3DSA:3.30.300.30 128 230 2.0E-12 T 12-10-2018 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 Pfam PF08345 Flagellar M-ring protein C-terminal 264 420 2.6E-38 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 PIRSF PIRSF004862 11 563 1.4E-126 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 K04M3_34600 f289738d99ed0f32eedeb30ac0e29eb8 570 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 7.2E-64 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF K04M3_08350 d41a0f3a58a233df4f703baa4f933a20 257 Pfam PF08907 Domain of unknown function (DUF1853) 34 200 3.8E-38 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 K04M3_34220 b4f78271c5da39a21e96429162bfb31d 396 SUPERFAMILY SSF103473 3 388 1.44E-50 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_34220 b4f78271c5da39a21e96429162bfb31d 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 K04M3_34220 b4f78271c5da39a21e96429162bfb31d 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 41.363 T 12-10-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 K04M3_34220 b4f78271c5da39a21e96429162bfb31d 396 Gene3D G3DSA:1.20.1720.10 4 380 1.4E-70 T 12-10-2018 K04M3_34220 b4f78271c5da39a21e96429162bfb31d 396 Pfam PF07690 Major Facilitator Superfamily 10 344 1.1E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_09750 44e67d75da9eff8a069d41b35459e6d7 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 6.2E-96 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 K04M3_09750 44e67d75da9eff8a069d41b35459e6d7 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.292 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 K04M3_09750 44e67d75da9eff8a069d41b35459e6d7 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 3.7E-111 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 K04M3_09750 44e67d75da9eff8a069d41b35459e6d7 335 SUPERFAMILY SSF52540 50 160 2.09E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_08530 3ee4b4bed0ea2ee5ceca9b6f64c29282 173 Pfam PF03350 Uncharacterized protein family, UPF0114 8 132 1.6E-21 T 12-10-2018 IPR005134 Uncharacterised protein family UPF0114 K04M3_38770 56b0d9f7234548e0484cd5b32b00f714 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 408 6.2E-18 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 K04M3_14820 dc43c3630d238ac524aca76a6a898845 437 SUPERFAMILY SSF56954 5 419 2.35E-84 T 12-10-2018 K04M3_14820 dc43c3630d238ac524aca76a6a898845 437 Gene3D G3DSA:1.20.1600.10 21 425 1.3E-79 T 12-10-2018 K04M3_14820 dc43c3630d238ac524aca76a6a898845 437 Pfam PF02321 Outer membrane efflux protein 233 417 1.3E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_14820 dc43c3630d238ac524aca76a6a898845 437 Pfam PF02321 Outer membrane efflux protein 22 213 2.3E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_14820 dc43c3630d238ac524aca76a6a898845 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 432 3.7E-87 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 K04M3_03350 9ba407a8eda6883993e700f58aa27bc6 266 Pfam PF06738 Putative threonine/serine exporter 21 258 1.9E-67 T 12-10-2018 IPR010619 Putative threonine/serine exporter K04M3_46740 341d95c05de6bf83b969a81499b71139 258 Pfam PF06629 MltA-interacting protein MipA 41 258 9.4E-41 T 12-10-2018 IPR010583 MltA-interacting MipA K04M3_41360 ba95f137e37b25768b6ed4e64b874ad9 92 Pfam PF10734 Protein of unknown function (DUF2523) 14 88 1.4E-5 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 K04M3_37490 9333be8587f0cc99abb2029ec5df7de2 5842 Gene3D G3DSA:2.60.40.2750 2922 3002 2.5E-6 T 12-10-2018 K04M3_37490 9333be8587f0cc99abb2029ec5df7de2 5842 Gene3D G3DSA:2.60.40.2750 1268 1331 1.4E-6 T 12-10-2018 K04M3_37490 9333be8587f0cc99abb2029ec5df7de2 5842 Gene3D G3DSA:2.60.40.2750 885 947 1.5E-9 T 12-10-2018 K04M3_37490 9333be8587f0cc99abb2029ec5df7de2 5842 Gene3D G3DSA:2.60.40.2750 310 373 9.3E-7 T 12-10-2018 K04M3_37490 9333be8587f0cc99abb2029ec5df7de2 5842 Gene3D G3DSA:2.60.40.2750 502 564 1.9E-9 T 12-10-2018 K04M3_37490 9333be8587f0cc99abb2029ec5df7de2 5842 Gene3D G3DSA:2.60.40.2750 4165 4245 2.7E-6 T 12-10-2018 K04M3_33200 b23e4c02f0347a475c947c40a471d612 403 SUPERFAMILY SSF56059 92 321 1.0E-29 T 12-10-2018 K04M3_33200 b23e4c02f0347a475c947c40a471d612 403 Gene3D G3DSA:3.30.470.20 108 400 7.9E-34 T 12-10-2018 K04M3_46690 5309bfc8004a042af048cc816da98e46 168 SUPERFAMILY SSF53146 1 117 2.62E-20 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily K04M3_46690 5309bfc8004a042af048cc816da98e46 168 Gene3D G3DSA:3.30.420.130 3 103 4.6E-13 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily K04M3_46690 5309bfc8004a042af048cc816da98e46 168 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 1.1E-13 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis K04M3_44410 fdba96db8dd4461b400f4b172025ceff 582 Pfam PF05947 Type VI secretion system, TssF 5 580 4.2E-188 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like K04M3_44410 fdba96db8dd4461b400f4b172025ceff 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 6.5E-203 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like K04M3_44410 fdba96db8dd4461b400f4b172025ceff 582 PIRSF PIRSF028304 2 582 1.1E-206 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like K04M3_06280 884518332dd6f4da2a880aa333e57c10 396 Pfam PF11301 Protein of unknown function (DUF3103) 40 394 2.6E-178 T 12-10-2018 IPR021452 Protein of unknown function DUF3103 K04M3_06500 d6b37128137a06f3a4e65b49e1b8ee76 429 PIRSF PIRSF005353 1 429 6.0E-188 T 12-10-2018 IPR026033 Purine permease PbuG-like K04M3_06500 d6b37128137a06f3a4e65b49e1b8ee76 429 Pfam PF00860 Permease family 17 391 1.1E-55 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 K04M3_22780 0aef92c42d88250acaffe270db8c2c0f 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 7.4E-20 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 K04M3_22780 0aef92c42d88250acaffe270db8c2c0f 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 1.2E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 K04M3_18930 548a7deda3cd1fcfb06730752f3985e4 843 SUPERFAMILY SSF49373 497 550 2.2E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments K04M3_18930 548a7deda3cd1fcfb06730752f3985e4 843 Gene3D G3DSA:2.60.40.1080 478 551 7.2E-9 T 12-10-2018 K04M3_49170 72201e58e0b5cb7aed6ee2a5516adfa7 341 Pfam PF01757 Acyltransferase family 8 326 1.1E-25 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 K04M3_43920 738a4ec8a9bb870fadace41d6556e5a4 42 Pfam PF10617 Protein of unknown function (DUF2474) 4 42 1.3E-17 T 12-10-2018 IPR018895 Protein of unknown function DUF2474 K04M3_27300 8f4e25ed2ee39be7202a564bc187db6b 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.623 T 12-10-2018 IPR003746 Protein of unknown function DUF167 K04M3_27300 8f4e25ed2ee39be7202a564bc187db6b 96 Gene3D G3DSA:3.30.1200.10 1 96 1.0E-34 T 12-10-2018 IPR036591 YggU-like superfamily K04M3_27300 8f4e25ed2ee39be7202a564bc187db6b 96 SUPERFAMILY SSF69786 3 96 4.71E-32 T 12-10-2018 IPR036591 YggU-like superfamily K04M3_27300 8f4e25ed2ee39be7202a564bc187db6b 96 SMART SM01152 8 84 1.0E-38 T 12-10-2018 IPR003746 Protein of unknown function DUF167 K04M3_27300 8f4e25ed2ee39be7202a564bc187db6b 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 1.5E-26 T 12-10-2018 IPR005228 Conserved hypothetical protein CHP00251 K04M3_27300 8f4e25ed2ee39be7202a564bc187db6b 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 2.6E-25 T 12-10-2018 IPR003746 Protein of unknown function DUF167 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.587 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 1.8E-65 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.2E-12 T 12-10-2018 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.2E-12 T 12-10-2018 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.2E-12 T 12-10-2018 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.2E-12 T 12-10-2018 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.2E-12 T 12-10-2018 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 Gene3D G3DSA:1.10.3860.10 3 405 1.5E-72 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_33670 ea51906d80779b4b2b920586c73a4849 405 SUPERFAMILY SSF118215 15 400 1.7E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_22500 540adb6b48f046fe501093289b65abca 419 SUPERFAMILY SSF56935 27 419 1.24E-89 T 12-10-2018 K04M3_22500 540adb6b48f046fe501093289b65abca 419 Gene3D G3DSA:2.40.160.60 27 419 9.1E-110 T 12-10-2018 K04M3_22500 540adb6b48f046fe501093289b65abca 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 419 1.0E-117 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) K04M3_18810 7d0ac2fdebd1abd122e18cd1023998f3 143 Gene3D G3DSA:1.10.8.60 24 92 3.3E-27 T 12-10-2018 K04M3_18810 7d0ac2fdebd1abd122e18cd1023998f3 143 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 67 76 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site K04M3_18810 7d0ac2fdebd1abd122e18cd1023998f3 143 SUPERFAMILY SSF52540 2 96 1.28E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_49290 ef39959412abfed67c69bd7d3d7c7fa7 117 Pfam PF04219 Protein of unknown function, DUF 12 100 1.1E-35 T 12-10-2018 IPR007335 Protein of unknown function DUF413 K04M3_32700 1720273bd6cbe9dedc73f19a206fcb1e 497 Gene3D G3DSA:1.20.1730.10 12 494 1.4E-95 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily K04M3_32700 1720273bd6cbe9dedc73f19a206fcb1e 497 Pfam PF00474 Sodium:solute symporter family 36 437 4.2E-105 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_32700 1720273bd6cbe9dedc73f19a206fcb1e 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 1.3E-94 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 K04M3_32700 1720273bd6cbe9dedc73f19a206fcb1e 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 487 1.4E-215 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 K04M3_34720 74253eead99ab39eef46f1a5cbd3c5ce 127 SUPERFAMILY SSF54593 1 126 2.42E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_34720 74253eead99ab39eef46f1a5cbd3c5ce 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 7.8E-21 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain K04M3_34720 74253eead99ab39eef46f1a5cbd3c5ce 127 Gene3D G3DSA:3.10.180.10 7 126 1.0E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_27060 794afc1cceebdb29b398902ac6a0b896 230 Gene3D G3DSA:3.30.110.170 31 227 9.3E-48 T 12-10-2018 K04M3_27060 794afc1cceebdb29b398902ac6a0b896 230 Gene3D G3DSA:3.30.70.2970 41 148 9.3E-48 T 12-10-2018 K04M3_27060 794afc1cceebdb29b398902ac6a0b896 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 1.5E-40 T 12-10-2018 IPR007497 Protein of unknown function DUF541 K04M3_10220 7ee297e8255bae929e2f7cf250f2f9ce 261 Pfam PF02698 DUF218 domain 80 242 3.2E-28 T 12-10-2018 IPR003848 Domain of unknown function DUF218 K04M3_16610 7b7791b1cd9ada263e43356b71e42130 437 SUPERFAMILY SSF56954 5 420 1.06E-89 T 12-10-2018 K04M3_16610 7b7791b1cd9ada263e43356b71e42130 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 428 5.4E-117 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 K04M3_16610 7b7791b1cd9ada263e43356b71e42130 437 Pfam PF02321 Outer membrane efflux protein 234 417 4.1E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_16610 7b7791b1cd9ada263e43356b71e42130 437 Pfam PF02321 Outer membrane efflux protein 24 212 8.9E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 K04M3_16610 7b7791b1cd9ada263e43356b71e42130 437 Gene3D G3DSA:1.20.1600.10 22 431 3.1E-79 T 12-10-2018 K04M3_10610 3c88fcbebdfc29f1fdec862e9dfb465d 443 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 429 1.0E-155 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_10610 3c88fcbebdfc29f1fdec862e9dfb465d 443 PIRSF PIRSF006446 1 442 5.7E-174 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 K04M3_27640 099a394068910797e7da23005722d134 251 Pfam PF04794 YdjC-like protein 2 230 4.7E-50 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like K04M3_27640 099a394068910797e7da23005722d134 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 38.056 T 12-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 K04M3_27640 099a394068910797e7da23005722d134 251 SUPERFAMILY SSF88713 1 242 3.11E-65 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 K04M3_27640 099a394068910797e7da23005722d134 251 Gene3D G3DSA:3.20.20.370 1 244 1.1E-68 T 12-10-2018 K04M3_13920 4dc98576463a0e23e14a0348477c9990 105 SUPERFAMILY SSF54427 4 92 2.19E-12 T 12-10-2018 IPR032710 NTF2-like domain superfamily K04M3_13920 4dc98576463a0e23e14a0348477c9990 105 Gene3D G3DSA:3.10.450.50 5 102 2.8E-9 T 12-10-2018 K04M3_04070 e779cf16e38374eb10c6768738a534c8 367 SUPERFAMILY SSF52540 60 197 5.19E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_04070 e779cf16e38374eb10c6768738a534c8 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.946 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 K04M3_04070 e779cf16e38374eb10c6768738a534c8 367 Gene3D G3DSA:3.40.50.300 12 192 6.4E-23 T 12-10-2018 K04M3_04070 e779cf16e38374eb10c6768738a534c8 367 Pfam PF03969 AFG1-like ATPase 1 364 4.0E-154 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 K04M3_35080 8e064119820aaed451bfc919ff98fc64 393 Gene3D G3DSA:1.20.1250.20 200 385 2.6E-15 T 12-10-2018 K04M3_35080 8e064119820aaed451bfc919ff98fc64 393 Gene3D G3DSA:1.20.1250.20 6 198 7.0E-7 T 12-10-2018 K04M3_35080 8e064119820aaed451bfc919ff98fc64 393 Pfam PF07690 Major Facilitator Superfamily 15 345 1.2E-12 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_35080 8e064119820aaed451bfc919ff98fc64 393 SUPERFAMILY SSF103473 14 378 1.7E-35 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_34010 22b4987e679fc68be2f4b89cc41dea53 431 SUPERFAMILY SSF53474 42 420 3.08E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_34010 22b4987e679fc68be2f4b89cc41dea53 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 K04M3_34010 22b4987e679fc68be2f4b89cc41dea53 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 K04M3_34010 22b4987e679fc68be2f4b89cc41dea53 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 K04M3_34010 22b4987e679fc68be2f4b89cc41dea53 431 Pfam PF00561 alpha/beta hydrolase fold 50 217 2.1E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_23320 fa582d4c1dda4e16aac7fee733003f87 472 Gene3D G3DSA:3.40.50.300 5 181 3.9E-25 T 12-10-2018 K04M3_23320 fa582d4c1dda4e16aac7fee733003f87 472 SUPERFAMILY SSF52540 11 468 4.72E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_23320 fa582d4c1dda4e16aac7fee733003f87 472 Pfam PF13245 AAA domain 6 163 1.0E-12 T 12-10-2018 K04M3_18820 4a9971a8171fae300da63210bd42092f 112 Pfam PF00158 Sigma-54 interaction domain 1 112 5.6E-44 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 K04M3_18820 4a9971a8171fae300da63210bd42092f 112 Gene3D G3DSA:3.40.50.300 1 112 4.0E-39 T 12-10-2018 K04M3_18820 4a9971a8171fae300da63210bd42092f 112 SUPERFAMILY SSF52540 1 112 7.92E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_18820 4a9971a8171fae300da63210bd42092f 112 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 80 95 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.2E-29 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 2.0E-51 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 SUPERFAMILY SSF52540 75 356 5.34E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Gene3D G3DSA:3.40.50.300 220 422 1.0E-48 T 12-10-2018 K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 SMART SM00487 20 229 3.9E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 Gene3D G3DSA:3.40.50.300 1 219 6.0E-75 T 12-10-2018 K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site K04M3_37820 fd5b5e0afb81ed2ef5a40b340d68be5a 430 SMART SM00490 258 339 8.2E-31 T 12-10-2018 IPR001650 Helicase, C-terminal K04M3_18850 1b8d7f1bf7b5e96a1d9a56eb2f89c6c1 123 Pfam PF07681 DoxX 13 86 1.1E-9 T 12-10-2018 IPR032808 DoxX family K04M3_52410 bc6b372304d07c3adc281d48a47d725c 323 Pfam PF04381 Putative exonuclease, RdgC 8 265 6.0E-23 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 K04M3_09250 4bbc5efeeaf4e19b8b0e2b32cc1c246d 275 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 259 8.7E-82 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 K04M3_09250 4bbc5efeeaf4e19b8b0e2b32cc1c246d 275 SUPERFAMILY SSF53474 16 261 9.51E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_09250 4bbc5efeeaf4e19b8b0e2b32cc1c246d 275 Gene3D G3DSA:3.40.50.1820 11 260 1.3E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_09250 4bbc5efeeaf4e19b8b0e2b32cc1c246d 275 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 34.26 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 K04M3_09250 4bbc5efeeaf4e19b8b0e2b32cc1c246d 275 Pfam PF12697 Alpha/beta hydrolase family 21 252 2.7E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 K04M3_44780 f328b31f4af5fe404f6564d6efb6516c 137 Gene3D G3DSA:1.10.260.40 2 66 7.5E-6 T 12-10-2018 K04M3_44780 f328b31f4af5fe404f6564d6efb6516c 137 SUPERFAMILY SSF47413 2 61 7.5E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 K04M3_22200 a36756ba5dc08a46f2bd4b73a3719737 114 PIRSF PIRSF016789 1 109 1.9E-38 T 12-10-2018 IPR007401 Protein of unknown function DUF454 K04M3_22200 a36756ba5dc08a46f2bd4b73a3719737 114 Pfam PF04304 Protein of unknown function (DUF454) 1 102 6.7E-34 T 12-10-2018 IPR007401 Protein of unknown function DUF454 K04M3_16100 d52e3e22a7ad0d33211e8ee7457b021b 226 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 214 3.1E-55 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain K04M3_02360 57ee0ffd0f1c0addabb12d518b961da2 263 Pfam PF13280 WYL domain 151 239 1.4E-6 T 12-10-2018 IPR026881 WYL domain K04M3_33240 6069c32435ee2a03057aa428197eb3f2 187 SUPERFAMILY SSF81345 19 167 2.22E-24 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_33240 6069c32435ee2a03057aa428197eb3f2 187 Pfam PF01032 FecCD transport family 40 152 5.5E-25 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 K04M3_33240 6069c32435ee2a03057aa428197eb3f2 187 Gene3D G3DSA:1.10.3470.10 14 181 1.5E-25 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_09040 b6be65caf0b530053b7fa1caa70ff51c 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.377 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 K04M3_09040 b6be65caf0b530053b7fa1caa70ff51c 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 9.9E-156 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 K04M3_13570 c576122ebe4d01336d15e170b7a382f7 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 77 7.7E-38 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 K04M3_13570 c576122ebe4d01336d15e170b7a382f7 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 1.2E-36 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 K04M3_15360 ead30d14b82bb78c78913ee451d658eb 171 SUPERFAMILY SSF56925 17 170 6.28E-28 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_15360 ead30d14b82bb78c78913ee451d658eb 171 Gene3D G3DSA:2.40.160.20 18 170 4.5E-27 T 12-10-2018 K04M3_15360 ead30d14b82bb78c78913ee451d658eb 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 2.3E-18 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_27330 f253d7e3ab86c44ef077120344490779 392 SMART SM00729 6 227 7.7E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 K04M3_27330 f253d7e3ab86c44ef077120344490779 392 Pfam PF06969 HemN C-terminal domain 314 374 1.5E-8 T 12-10-2018 IPR010723 HemN, C-terminal K04M3_27330 f253d7e3ab86c44ef077120344490779 392 Gene3D G3DSA:3.80.30.20 2 307 5.3E-96 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe K04M3_27330 f253d7e3ab86c44ef077120344490779 392 SUPERFAMILY SSF102114 4 386 1.16E-110 T 12-10-2018 K04M3_27330 f253d7e3ab86c44ef077120344490779 392 Pfam PF04055 Radical SAM superfamily 11 181 3.5E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 K04M3_27330 f253d7e3ab86c44ef077120344490779 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 1.5E-136 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 K04M3_03630 78f40afa703be39bced5f99f246e0b57 352 Gene3D G3DSA:3.30.1180.20 182 352 1.5E-55 T 12-10-2018 K04M3_03630 78f40afa703be39bced5f99f246e0b57 352 Gene3D G3DSA:3.40.50.10440 11 181 1.3E-61 T 12-10-2018 K04M3_03630 78f40afa703be39bced5f99f246e0b57 352 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 349 6.6E-142 T 12-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 K04M3_03630 78f40afa703be39bced5f99f246e0b57 352 SUPERFAMILY SSF82549 10 352 6.54E-124 T 12-10-2018 K04M3_03630 78f40afa703be39bced5f99f246e0b57 352 Pfam PF02733 Dak1 domain 17 348 3.3E-124 T 12-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 Pfam PF13244 Domain of unknown function (DUF4040) 592 657 2.4E-13 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 204 225 5.2E-33 T 12-10-2018 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 111 5.2E-33 T 12-10-2018 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 252 5.2E-33 T 12-10-2018 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 294 306 5.2E-33 T 12-10-2018 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 63 88 5.2E-33 T 12-10-2018 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 761 878 7.7E-26 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 49 101 3.9E-10 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_44200 344f79902d71efe8a4a59b0631215aa9 889 Pfam PF00361 Proton-conducting membrane transporter 114 401 2.6E-61 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_04110 817d0916f6abc15b67010c3a93ce72ee 421 PIRSF PIRSF038885 1 421 7.2E-153 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 K04M3_04110 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81342 6 296 1.22E-92 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 K04M3_04110 817d0916f6abc15b67010c3a93ce72ee 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 6.2E-41 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 K04M3_04110 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81648 297 412 1.18E-33 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 K04M3_04110 817d0916f6abc15b67010c3a93ce72ee 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 5.1E-66 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 K04M3_04110 817d0916f6abc15b67010c3a93ce72ee 421 Gene3D G3DSA:1.20.810.10 1 421 1.3E-149 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 K04M3_17480 2f6a39df0538e41e6c74265d16f083ae 211 SUPERFAMILY SSF140591 92 191 1.96E-7 T 12-10-2018 K04M3_17480 2f6a39df0538e41e6c74265d16f083ae 211 Pfam PF09025 YopR, type III needle-polymerisation regulator 72 211 4.7E-51 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 K04M3_17480 2f6a39df0538e41e6c74265d16f083ae 211 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 86 210 2.1E-43 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 K04M3_39740 0dcd51d436996f9239d853723e7c5755 576 SUPERFAMILY SSF52540 22 107 7.98E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_39740 0dcd51d436996f9239d853723e7c5755 576 Gene3D G3DSA:3.40.50.300 3 216 3.9E-18 T 12-10-2018 K04M3_39740 0dcd51d436996f9239d853723e7c5755 576 Gene3D G3DSA:3.30.420.240 388 522 5.1E-6 T 12-10-2018 K04M3_32540 d9e68330e4f803fc3671b27e8eb2a992 236 SUPERFAMILY SSF53187 13 213 2.35E-28 T 12-10-2018 K04M3_32540 d9e68330e4f803fc3671b27e8eb2a992 236 Gene3D G3DSA:3.40.630.10 1 236 2.3E-60 T 12-10-2018 K04M3_32540 d9e68330e4f803fc3671b27e8eb2a992 236 Pfam PF00246 Zinc carboxypeptidase 18 156 1.0E-10 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 K04M3_04290 e57e8c712f34db09548362a85dc3b9ba 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04290 e57e8c712f34db09548362a85dc3b9ba 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.387 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04290 e57e8c712f34db09548362a85dc3b9ba 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.4E-128 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_04290 e57e8c712f34db09548362a85dc3b9ba 398 Pfam PF01098 Cell cycle protein 26 380 2.4E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_18730 d145c21b3bca811b6476199b46cc9b89 60 Gene3D G3DSA:3.30.70.270 1 60 5.2E-6 T 12-10-2018 K04M3_18730 d145c21b3bca811b6476199b46cc9b89 60 SUPERFAMILY SSF55073 2 56 2.2E-5 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_01600 882847066b195b29ecec05a06fa6887f 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 9.1E-14 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like K04M3_01600 882847066b195b29ecec05a06fa6887f 141 PIRSF PIRSF029598 3 135 3.6E-41 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 K04M3_02200 fb71f105936260e3eb427709422d414f 701 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 37 171 1.9E-5 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH K04M3_02200 fb71f105936260e3eb427709422d414f 701 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 178 608 2.5E-15 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH K04M3_16110 f4002b71f2a699fc4faf94fa9e9c6389 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type K04M3_16110 f4002b71f2a699fc4faf94fa9e9c6389 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 51 4.6E-18 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type K04M3_11840 8c136baa2338a57c063703d184ceb92f 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 1.2E-44 T 12-10-2018 IPR010791 AttH domain K04M3_11840 8c136baa2338a57c063703d184ceb92f 374 Gene3D G3DSA:2.40.370.10 67 251 1.6E-53 T 12-10-2018 IPR023374 AttH-like domain superfamily K04M3_11840 8c136baa2338a57c063703d184ceb92f 374 Pfam PF17186 Lipocalin-like domain 252 374 4.7E-34 T 12-10-2018 K04M3_11840 8c136baa2338a57c063703d184ceb92f 374 Gene3D G3DSA:2.40.370.10 253 374 6.5E-23 T 12-10-2018 IPR023374 AttH-like domain superfamily K04M3_11840 8c136baa2338a57c063703d184ceb92f 374 SUPERFAMILY SSF159245 56 374 7.72E-94 T 12-10-2018 K04M3_11580 c4f18e2d8a05cd384984c4a80da8c3ae 313 SUPERFAMILY SSF53335 9 287 5.83E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_11580 c4f18e2d8a05cd384984c4a80da8c3ae 313 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 2.8E-177 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 K04M3_11580 c4f18e2d8a05cd384984c4a80da8c3ae 313 Gene3D G3DSA:3.40.50.150 82 306 8.3E-47 T 12-10-2018 K04M3_40350 ff601606847c9972d1ad877503fdb1c0 133 Pfam PF04143 Sulphur transport 3 127 2.1E-9 T 12-10-2018 IPR007272 Sulphur transport domain K04M3_00720 a732e4cc119d9d19ac5fe048177ec73e 58 PIRSF PIRSF036466 1 55 6.5E-20 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 K04M3_00720 a732e4cc119d9d19ac5fe048177ec73e 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 17.124 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 K04M3_00720 a732e4cc119d9d19ac5fe048177ec73e 58 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 6.6E-12 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 K04M3_05080 810d298a694a596eeec97eb3679eeacb 494 Pfam PF02554 Carbon starvation protein CstA 156 293 7.1E-20 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 K04M3_05080 810d298a694a596eeec97eb3679eeacb 494 Pfam PF02554 Carbon starvation protein CstA 4 144 6.4E-33 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 K04M3_05080 810d298a694a596eeec97eb3679eeacb 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.2E-21 T 12-10-2018 IPR025299 CstA, C-terminal domain K04M3_06040 e84c4c149cfdb81b4688fa15a92fdb98 154 Pfam PF13274 Protein of unknown function (DUF4065) 27 123 1.3E-20 T 12-10-2018 IPR025272 Domain of unknown function DUF4065 K04M3_50560 2aada81518061da14f45037d302d144c 878 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 121 832 5.7E-48 T 12-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY K04M3_10170 47616c858c5e5866460a168e10a801de 228 Pfam PF09335 SNARE associated Golgi protein 65 181 2.0E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein K04M3_11720 6973f3e1692c8e67a8442ae8e2cb5a76 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-38 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 K04M3_11720 6973f3e1692c8e67a8442ae8e2cb5a76 92 SUPERFAMILY SSF50715 1 92 4.19E-28 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_11720 6973f3e1692c8e67a8442ae8e2cb5a76 92 Gene3D G3DSA:2.40.240.10 1 92 7.2E-34 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 K04M3_11720 6973f3e1692c8e67a8442ae8e2cb5a76 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.525 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 K04M3_11720 6973f3e1692c8e67a8442ae8e2cb5a76 92 Pfam PF01386 Ribosomal L25p family 4 89 4.3E-22 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 K04M3_17470 26bcc858a0ee75f0f158b89e65773351 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 1.9E-28 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 K04M3_17470 26bcc858a0ee75f0f158b89e65773351 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 K04M3_40140 beccfe87e183ec4eb53a45006d96b184 129 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 4.0E-47 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA K04M3_40140 beccfe87e183ec4eb53a45006d96b184 129 Pfam PF11756 Nitrous oxide-stimulated promoter 8 110 3.0E-46 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA K04M3_38220 7b728779fbbb9df641b2a93e22d5c9bc 124 Gene3D G3DSA:1.10.1660.10 1 124 1.3E-26 T 12-10-2018 K04M3_38220 7b728779fbbb9df641b2a93e22d5c9bc 124 SMART SM00422 4 71 1.2E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_38220 7b728779fbbb9df641b2a93e22d5c9bc 124 Pfam PF00376 MerR family regulatory protein 5 40 8.8E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_38220 7b728779fbbb9df641b2a93e22d5c9bc 124 SUPERFAMILY SSF46955 3 112 1.25E-25 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_38220 7b728779fbbb9df641b2a93e22d5c9bc 124 Pfam PF09278 MerR, DNA binding 47 110 2.3E-16 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding K04M3_35030 ca311689703be4452c866853399ea795 91 SUPERFAMILY SSF55729 1 90 1.06E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_35030 ca311689703be4452c866853399ea795 91 Pfam PF14542 GCN5-related N-acetyl-transferase 14 88 6.4E-20 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase K04M3_35030 ca311689703be4452c866853399ea795 91 Gene3D G3DSA:3.40.630.30 1 91 6.5E-21 T 12-10-2018 K04M3_18600 8a96494ecdffb448cd7033f616b9115a 387 Gene3D G3DSA:3.60.60.10 29 377 2.1E-91 T 12-10-2018 K04M3_18600 8a96494ecdffb448cd7033f616b9115a 387 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 29 301 1.6E-52 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal K04M3_18600 8a96494ecdffb448cd7033f616b9115a 387 SUPERFAMILY SSF56235 29 367 4.32E-75 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_05430 f89abbfb179dd844f56ca1041b935cd9 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.078 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 K04M3_05430 f89abbfb179dd844f56ca1041b935cd9 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 8.9E-126 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 K04M3_47040 c19501f61f9ad7a0f64e1b8090c19540 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 1.1E-20 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 K04M3_47040 c19501f61f9ad7a0f64e1b8090c19540 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 3.1E-19 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 K04M3_14590 8f4a513b2260e6db2cc97be4f14f53cd 121 SUPERFAMILY SSF54593 4 118 3.71E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_14590 8f4a513b2260e6db2cc97be4f14f53cd 121 Gene3D G3DSA:3.10.180.10 1 120 6.5E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase K04M3_14590 8f4a513b2260e6db2cc97be4f14f53cd 121 PIRSF PIRSF039020 1 121 7.8E-40 T 12-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 Gene3D G3DSA:3.40.640.10 145 361 6.2E-80 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 Pfam PF00155 Aminotransferase class I and II 145 456 2.7E-23 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.3E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 Gene3D G3DSA:1.10.10.10 10 77 1.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 SUPERFAMILY SSF46785 11 77 3.7E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 SMART SM00345 17 76 4.9E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 Gene3D G3DSA:3.90.1150.10 117 473 6.2E-80 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 K04M3_48700 c6eb65e69fa384869667a0861ff9014c 478 SUPERFAMILY SSF53383 96 475 3.03E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase K04M3_19740 69ecdd80f01455cbcb7baba85fcebc82 169 Gene3D G3DSA:3.30.1380.10 51 169 1.1E-10 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_19740 69ecdd80f01455cbcb7baba85fcebc82 169 SUPERFAMILY SSF55166 55 169 1.6E-33 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 K04M3_19740 69ecdd80f01455cbcb7baba85fcebc82 169 Pfam PF05951 Bacterial protein of unknown function (DUF882) 22 169 4.9E-67 T 12-10-2018 IPR010275 Protein of unknown function DUF882 K04M3_14840 9ba4d2dcfe60fcd1317c9ef585bc5244 280 SUPERFAMILY SSF53850 44 269 3.26E-15 T 12-10-2018 K04M3_14840 9ba4d2dcfe60fcd1317c9ef585bc5244 280 Gene3D G3DSA:3.40.190.10 216 254 1.6E-5 T 12-10-2018 K04M3_14840 9ba4d2dcfe60fcd1317c9ef585bc5244 280 Gene3D G3DSA:3.40.190.10 156 215 1.6E-5 T 12-10-2018 K04M3_14840 9ba4d2dcfe60fcd1317c9ef585bc5244 280 Gene3D G3DSA:3.40.190.10 102 123 6.6E-7 T 12-10-2018 K04M3_14840 9ba4d2dcfe60fcd1317c9ef585bc5244 280 Gene3D G3DSA:3.40.190.10 48 101 6.6E-7 T 12-10-2018 K04M3_42390 143fd01ee3287b2346aefbc7159fcdb5 279 SUPERFAMILY SSF56281 13 219 6.09E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_42390 143fd01ee3287b2346aefbc7159fcdb5 279 Pfam PF00753 Metallo-beta-lactamase superfamily 53 181 6.8E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_42390 143fd01ee3287b2346aefbc7159fcdb5 279 SMART SM00849 52 235 5.7E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase K04M3_42390 143fd01ee3287b2346aefbc7159fcdb5 279 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 96 116 - T 12-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 K04M3_42390 143fd01ee3287b2346aefbc7159fcdb5 279 Gene3D G3DSA:3.60.15.10 30 278 1.7E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like K04M3_22890 350c24c6fce0df42acdb52a661a792d9 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 11 102 2.7E-19 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_22890 350c24c6fce0df42acdb52a661a792d9 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 1.0E-28 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_22890 350c24c6fce0df42acdb52a661a792d9 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.657 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_22890 350c24c6fce0df42acdb52a661a792d9 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.2E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_22890 350c24c6fce0df42acdb52a661a792d9 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.2E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_22890 350c24c6fce0df42acdb52a661a792d9 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.2E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 K04M3_40590 b95744ef9ba3ec1a876ba42192b29636 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 1.5E-93 T 12-10-2018 IPR021290 Protein of unknown function DUF2861 K04M3_22220 7a9db9c31721a52ba8daa2757adfca82 368 Gene3D G3DSA:3.60.40.10 165 347 6.3E-6 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 K04M3_22220 7a9db9c31721a52ba8daa2757adfca82 368 SMART SM00448 20 132 4.4E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_22220 7a9db9c31721a52ba8daa2757adfca82 368 Gene3D G3DSA:3.40.50.2300 9 151 8.0E-36 T 12-10-2018 K04M3_22220 7a9db9c31721a52ba8daa2757adfca82 368 SUPERFAMILY SSF52172 20 138 4.98E-35 T 12-10-2018 IPR011006 CheY-like superfamily K04M3_22220 7a9db9c31721a52ba8daa2757adfca82 368 Pfam PF00072 Response regulator receiver domain 22 132 6.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 K04M3_45320 4184560515e7b11579705ade1dfae62c 105 Pfam PF01541 GIY-YIG catalytic domain 9 79 1.1E-16 T 12-10-2018 IPR000305 GIY-YIG endonuclease K04M3_45320 4184560515e7b11579705ade1dfae62c 105 SMART SM00465 8 86 1.5E-4 T 12-10-2018 IPR000305 GIY-YIG endonuclease K04M3_45320 4184560515e7b11579705ade1dfae62c 105 Gene3D G3DSA:3.40.1440.10 2 101 1.1E-28 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 K04M3_45320 4184560515e7b11579705ade1dfae62c 105 SUPERFAMILY SSF82771 8 79 1.12E-13 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 K04M3_33510 8edd9257641feb60f87d7d78735d6c58 431 SUPERFAMILY SSF103473 12 414 1.83E-52 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_33510 8edd9257641feb60f87d7d78735d6c58 431 Pfam PF07690 Major Facilitator Superfamily 22 368 7.5E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_33510 8edd9257641feb60f87d7d78735d6c58 431 Gene3D G3DSA:1.20.1250.20 218 414 4.5E-20 T 12-10-2018 K04M3_33510 8edd9257641feb60f87d7d78735d6c58 431 Gene3D G3DSA:1.20.1250.20 13 214 1.8E-22 T 12-10-2018 K04M3_20430 6f1606bef0fb3afe9ac82650f55974a3 468 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 29 241 1.0E-17 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 K04M3_06970 6aef64424fb2a955e5ce2e8e972b9e9f 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 2.8E-134 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_06970 6aef64424fb2a955e5ce2e8e972b9e9f 373 Pfam PF01098 Cell cycle protein 24 367 2.6E-112 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_06970 6aef64424fb2a955e5ce2e8e972b9e9f 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_06970 6aef64424fb2a955e5ce2e8e972b9e9f 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.105 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 K04M3_13560 2e749af61271554e9ceeb049bc1ea78a 134 Gene3D G3DSA:1.20.1270.180 17 132 2.5E-20 T 12-10-2018 K04M3_13560 2e749af61271554e9ceeb049bc1ea78a 134 Pfam PF07007 Lysozyme inhibitor LprI 34 126 2.0E-17 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal K04M3_29890 cf7aef98879a3958ca18ce13d21fbb43 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 4.4E-39 T 12-10-2018 IPR001107 Band 7 domain K04M3_48060 09c23610b5b020366e7dbb46668ce33f 114 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 7 92 4.0E-10 T 12-10-2018 IPR035242 Protein of unknown function DUF5329 K04M3_48060 09c23610b5b020366e7dbb46668ce33f 114 Pfam PF17263 Family of unknown function (DUF5329) 22 109 9.6E-32 T 12-10-2018 IPR035242 Protein of unknown function DUF5329 K04M3_40730 6cc0c7cadcf95df4d60cdad3af9bc42b 210 Pfam PF08722 TnsA endonuclease N terminal 46 125 9.3E-6 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal K04M3_07640 a66201d28b99e7357ac470baf6f8ad2b 104 SUPERFAMILY SSF101498 2 97 1.57E-21 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily K04M3_07640 a66201d28b99e7357ac470baf6f8ad2b 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 3.1E-23 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 K04M3_07640 a66201d28b99e7357ac470baf6f8ad2b 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 1.8E-17 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal K04M3_10600 40ea79068056794230e696e4d1e88d85 330 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 320 8.4E-81 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 K04M3_17170 cccd1cece3ae077b8409e6bee5231cbf 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 1.5E-48 T 12-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 K04M3_23190 dbc3a3bf4f8594cceab8438271e78b50 261 Gene3D G3DSA:3.50.50.60 2 190 1.9E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_23190 dbc3a3bf4f8594cceab8438271e78b50 261 Pfam PF00890 FAD binding domain 9 171 6.3E-39 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 K04M3_23190 dbc3a3bf4f8594cceab8438271e78b50 261 SUPERFAMILY SSF51905 9 170 6.13E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily K04M3_51560 eae6299e43a77f12bd5360f59353497b 125 Pfam PF00816 H-NS histone family 35 111 2.2E-11 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 K04M3_51560 eae6299e43a77f12bd5360f59353497b 125 Gene3D G3DSA:1.10.287.1050 2 79 7.8E-6 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 K04M3_51560 eae6299e43a77f12bd5360f59353497b 125 SUPERFAMILY SSF81273 79 121 3.41E-6 T 12-10-2018 K04M3_51560 eae6299e43a77f12bd5360f59353497b 125 Gene3D G3DSA:4.10.430.10 80 124 7.3E-15 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 Gene3D G3DSA:2.60.120.260 51 178 3.0E-20 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 Pfam PF03170 Bacterial cellulose synthase subunit 49 659 3.8E-206 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 Gene3D G3DSA:2.60.120.260 337 495 2.9E-28 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 124 147 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 503 522 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 165 186 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 699 719 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 288 309 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 455 474 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 540 560 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 75 96 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 207 230 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_08010 41c73c9a768dbcb89c67eeab98203fc6 761 PRINTS PR01440 Cellulose synthase subunit B signature 371 392 1.6E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 K04M3_32500 b661e807fac76f52d6979e1ff2a419c2 351 Gene3D G3DSA:2.40.160.10 21 350 1.2E-33 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_32500 b661e807fac76f52d6979e1ff2a419c2 351 SUPERFAMILY SSF56935 25 349 2.0E-40 T 12-10-2018 K04M3_31220 8789fd144193323bed49a413772e7a99 198 SMART SM01144 1 192 2.0E-58 T 12-10-2018 IPR005636 DTW K04M3_31220 8789fd144193323bed49a413772e7a99 198 Pfam PF03942 DTW domain 5 183 3.8E-46 T 12-10-2018 IPR005636 DTW K04M3_19680 e831d80499bc8304cbcdf05c4e8491c5 428 PIRSF PIRSF006066 1 427 5.3E-74 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_19680 e831d80499bc8304cbcdf05c4e8491c5 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.2E-100 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit K04M3_19680 e831d80499bc8304cbcdf05c4e8491c5 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.0E-105 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_37350 73d107fe8b151d6780555cae342469a6 119 SUPERFAMILY SSF52833 41 118 2.92E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_37350 73d107fe8b151d6780555cae342469a6 119 Gene3D G3DSA:3.40.30.10 20 118 4.9E-14 T 12-10-2018 K04M3_37350 73d107fe8b151d6780555cae342469a6 119 Pfam PF00462 Glutaredoxin 43 96 3.0E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 K04M3_35200 4b2e9ca8187c6647506b97f6ee3549e8 266 Gene3D G3DSA:1.10.1660.10 4 76 1.4E-24 T 12-10-2018 K04M3_35200 4b2e9ca8187c6647506b97f6ee3549e8 266 SMART SM00422 10 79 1.4E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_35200 4b2e9ca8187c6647506b97f6ee3549e8 266 Pfam PF13411 MerR HTH family regulatory protein 10 76 5.3E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 K04M3_35200 4b2e9ca8187c6647506b97f6ee3549e8 266 SUPERFAMILY SSF46955 10 94 3.02E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily K04M3_02430 194adde4ba3ed971525b7b7fda003324 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 1.6E-177 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 K04M3_02430 194adde4ba3ed971525b7b7fda003324 433 PIRSF PIRSF015658 1 432 5.8E-173 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 K04M3_02430 194adde4ba3ed971525b7b7fda003324 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 1.1E-156 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 K04M3_15760 91b563460e2cd44dbd58d19b543ed0c2 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.149 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 K04M3_15760 91b563460e2cd44dbd58d19b543ed0c2 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 9.9E-73 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 K04M3_15760 91b563460e2cd44dbd58d19b543ed0c2 195 Gene3D G3DSA:3.90.550.10 3 193 2.4E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_15760 91b563460e2cd44dbd58d19b543ed0c2 195 SUPERFAMILY SSF53448 7 189 2.92E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases K04M3_15760 91b563460e2cd44dbd58d19b543ed0c2 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 6.1E-34 T 12-10-2018 IPR025877 MobA-like NTP transferase K04M3_17210 c737f7986aeab2b684099364b53658f5 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 1 137 1.6E-58 T 12-10-2018 IPR013405 Type III secretion system regulator, LcrR K04M3_17210 c737f7986aeab2b684099364b53658f5 137 Pfam PF09621 Type III secretion system regulator (LcrR) 4 136 6.1E-56 T 12-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 K04M3_19350 a45863414b904cf4bd3f971ce3fc0a81 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 7.7E-71 T 12-10-2018 IPR021334 Protein of unknown function DUF2947 K04M3_18030 47fb2e35f52519ffbb24e22482da4c08 202 SUPERFAMILY SSF50475 32 151 1.87E-16 T 12-10-2018 K04M3_18030 47fb2e35f52519ffbb24e22482da4c08 202 Gene3D G3DSA:2.30.110.10 20 147 1.2E-22 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 K04M3_18030 47fb2e35f52519ffbb24e22482da4c08 202 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 122 9.5E-13 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 K04M3_18030 47fb2e35f52519ffbb24e22482da4c08 202 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 202 1.4E-72 T 12-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent K04M3_30470 053707ecb7c42fe1e34ea74d68862e0a 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 4.3E-48 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 K04M3_30470 053707ecb7c42fe1e34ea74d68862e0a 307 Gene3D G3DSA:3.40.50.720 34 299 1.1E-94 T 12-10-2018 K04M3_30470 053707ecb7c42fe1e34ea74d68862e0a 307 SUPERFAMILY SSF52283 16 120 2.83E-6 T 12-10-2018 K04M3_30470 053707ecb7c42fe1e34ea74d68862e0a 307 Gene3D G3DSA:3.40.50.720 91 276 1.1E-94 T 12-10-2018 K04M3_30470 053707ecb7c42fe1e34ea74d68862e0a 307 SUPERFAMILY SSF51735 93 273 1.02E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_25720 2e85a35cbeeb2cf721f134196bc2e228 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.8E-57 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 K04M3_25720 2e85a35cbeeb2cf721f134196bc2e228 209 SUPERFAMILY SSF53335 30 209 6.72E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_25720 2e85a35cbeeb2cf721f134196bc2e228 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.934 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 K04M3_25720 2e85a35cbeeb2cf721f134196bc2e228 209 Gene3D G3DSA:3.40.50.150 30 209 6.6E-61 T 12-10-2018 K04M3_25720 2e85a35cbeeb2cf721f134196bc2e228 209 PIRSF PIRSF005461 1 209 1.1E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 K04M3_11250 8117c86a5e7403a805d8ff4762b584dc 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 189 3.1E-15 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 K04M3_11250 8117c86a5e7403a805d8ff4762b584dc 275 Gene3D G3DSA:3.40.50.720 1 275 8.4E-46 T 12-10-2018 K04M3_11250 8117c86a5e7403a805d8ff4762b584dc 275 SUPERFAMILY SSF51735 8 268 1.43E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily K04M3_06800 9a3ec4c6b2d7efeb303ef28ac99b9f10 258 PIRSF PIRSF029037 1 258 2.5E-117 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 K04M3_06800 9a3ec4c6b2d7efeb303ef28ac99b9f10 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 5.7E-115 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 K04M3_23740 d59ecd067d8a1c1f2e385aeff7f443d8 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 2.3E-95 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_23740 d59ecd067d8a1c1f2e385aeff7f443d8 240 Pfam PF00929 Exonuclease 13 180 7.5E-38 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_23740 d59ecd067d8a1c1f2e385aeff7f443d8 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 3.8E-80 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 K04M3_23740 d59ecd067d8a1c1f2e385aeff7f443d8 240 SMART SM00479 11 189 5.4E-51 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_23740 d59ecd067d8a1c1f2e385aeff7f443d8 240 Gene3D G3DSA:3.30.420.10 4 194 2.0E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_23740 d59ecd067d8a1c1f2e385aeff7f443d8 240 SUPERFAMILY SSF53098 11 190 2.6E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_33050 ee9e5e8e83ea6e862dea54c70b87b81b 88 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 4.7E-46 T 12-10-2018 IPR021376 Protein of unknown function DUF2999 K04M3_14730 e113a9fefead24cda972b800ed9b7948 262 SUPERFAMILY SSF56436 37 261 1.84E-57 T 12-10-2018 IPR016187 C-type lectin fold K04M3_14730 e113a9fefead24cda972b800ed9b7948 262 Gene3D G3DSA:3.90.1580.10 30 260 8.7E-60 T 12-10-2018 K04M3_14730 e113a9fefead24cda972b800ed9b7948 262 Pfam PF03781 Sulfatase-modifying factor enzyme 1 38 259 2.3E-47 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 K04M3_06900 bc6c92340a25e2cbae3318ec755394a1 205 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 16 194 2.8E-35 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT K04M3_16660 cc777c4069be6970996bfecd07f07185 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.0E-33 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 K04M3_41670 272010f7761f966eb927a34010579303 227 SUPERFAMILY SSF50891 92 220 6.07E-35 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_41670 272010f7761f966eb927a34010579303 227 Gene3D G3DSA:3.30.1360.40 7 82 4.7E-10 T 12-10-2018 K04M3_41670 272010f7761f966eb927a34010579303 227 SUPERFAMILY SSF160467 8 97 1.96E-11 T 12-10-2018 K04M3_41670 272010f7761f966eb927a34010579303 227 Gene3D G3DSA:2.40.100.10 91 226 2.3E-44 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily K04M3_41670 272010f7761f966eb927a34010579303 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 197 1.4E-54 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D K04M3_41670 272010f7761f966eb927a34010579303 227 SMART SM00796 6 204 9.1E-58 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D K04M3_17330 fae7f64810b7a9778aeb84ff5df95e65 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.9E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_17330 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_17330 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_17330 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_17330 fae7f64810b7a9778aeb84ff5df95e65 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 7.8E-32 T 12-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 K04M3_17330 fae7f64810b7a9778aeb84ff5df95e65 88 PIRSF PIRSF004669 1 88 3.5E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 K04M3_23360 7e0399e0b614eaa8b57c7340645aa855 94 SUPERFAMILY SSF46689 7 92 8.6E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_23360 7e0399e0b614eaa8b57c7340645aa855 94 Pfam PF01527 Transposase 10 73 4.5E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 K04M3_33720 00d8e0cb5bce6b2577c83591d83df626 293 Pfam PF04018 Domain of unknown function (DUF368) 1 245 1.2E-96 T 12-10-2018 IPR007163 Protein of unknown function DUF368 K04M3_11380 11d7b6a70a9f8ff6947e0692ab95301d 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 7.6E-37 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 K04M3_33830 7a7abf7d109e0755ed8810bbbd4be2d1 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 K04M3_33830 7a7abf7d109e0755ed8810bbbd4be2d1 124 PIRSF PIRSF031804 1 124 6.6E-42 T 12-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 K04M3_47810 f60528691c12753fb1172ec3ef54a791 202 SUPERFAMILY SSF51197 15 199 2.06E-67 T 12-10-2018 K04M3_47810 f60528691c12753fb1172ec3ef54a791 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 197 4.3E-32 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like K04M3_47810 f60528691c12753fb1172ec3ef54a791 202 Gene3D G3DSA:2.60.120.590 13 201 6.2E-68 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily K04M3_29800 60925212eb6024f1b1f56b9b6d2d45c6 375 Gene3D G3DSA:2.70.70.10 236 375 1.1E-34 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_29800 60925212eb6024f1b1f56b9b6d2d45c6 375 Pfam PF01551 Peptidase family M23 276 369 1.1E-24 T 12-10-2018 IPR016047 Peptidase M23 K04M3_29800 60925212eb6024f1b1f56b9b6d2d45c6 375 SUPERFAMILY SSF51261 143 373 1.05E-48 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_34810 be3cd2ce762bfedf64286ce5c2c9e745 310 Gene3D G3DSA:3.40.190.10 19 170 2.7E-21 T 12-10-2018 K04M3_34810 be3cd2ce762bfedf64286ce5c2c9e745 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 291 9.4E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_34810 be3cd2ce762bfedf64286ce5c2c9e745 310 SUPERFAMILY SSF53850 10 292 1.32E-37 T 12-10-2018 K04M3_34810 be3cd2ce762bfedf64286ce5c2c9e745 310 SMART SM00062 38 294 6.7E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_34810 be3cd2ce762bfedf64286ce5c2c9e745 310 Gene3D G3DSA:3.40.190.10 200 294 1.4E-9 T 12-10-2018 K04M3_23260 9d9c7b8995ae3001a52337391628ddfc 467 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 114 300 1.3E-7 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 K04M3_06410 1261be65132ab7755541a0f7e8a93546 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.102 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 K04M3_06410 1261be65132ab7755541a0f7e8a93546 182 Pfam PF14437 MafB19-like deaminase 11 155 3.4E-32 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 K04M3_06410 1261be65132ab7755541a0f7e8a93546 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 K04M3_06410 1261be65132ab7755541a0f7e8a93546 182 Gene3D G3DSA:3.40.140.10 5 169 1.1E-63 T 12-10-2018 K04M3_06410 1261be65132ab7755541a0f7e8a93546 182 SUPERFAMILY SSF53927 6 159 3.35E-56 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 K04M3_05970 a0b4a1045d305b0ffc9ef9a52dfbb905 256 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 8 251 2.4E-60 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ K04M3_05970 a0b4a1045d305b0ffc9ef9a52dfbb905 256 SUPERFAMILY SSF101082 29 225 5.36E-34 T 12-10-2018 K04M3_45760 06696047ed83a7f513d2ce4ee2755914 143 Pfam PF03733 Inner membrane component domain 4 54 2.2E-14 T 12-10-2018 IPR005185 Inner membrane component domain K04M3_45760 06696047ed83a7f513d2ce4ee2755914 143 Pfam PF03733 Inner membrane component domain 76 126 2.1E-18 T 12-10-2018 IPR005185 Inner membrane component domain K04M3_45760 06696047ed83a7f513d2ce4ee2755914 143 PIRSF PIRSF028777 1 138 4.0E-51 T 12-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 K04M3_46670 f8b03155f0b7221fb588ec1ed6729edf 270 Pfam PF01636 Phosphotransferase enzyme family 17 192 9.8E-10 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase K04M3_46670 f8b03155f0b7221fb588ec1ed6729edf 270 SUPERFAMILY SSF56112 9 208 5.1E-18 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily K04M3_47110 5716c2f4aa110f0658b9ee92a87aa92e 182 Pfam PF10135 Rod binding protein 54 104 2.9E-11 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal K04M3_40710 88ff4699d19ed55f43106b0496546bd0 328 SUPERFAMILY SSF52540 29 271 5.65E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_40710 88ff4699d19ed55f43106b0496546bd0 328 Pfam PF05621 Bacterial TniB protein 20 268 1.1E-17 T 12-10-2018 IPR008868 Bacterial TniB K04M3_40710 88ff4699d19ed55f43106b0496546bd0 328 Gene3D G3DSA:3.40.50.300 9 188 2.1E-11 T 12-10-2018 K04M3_05420 721ffee439b2448465f90e1881979e36 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 8.0E-21 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal K04M3_05420 721ffee439b2448465f90e1881979e36 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_05420 721ffee439b2448465f90e1881979e36 466 Gene3D G3DSA:2.40.30.10 367 453 4.0E-8 T 12-10-2018 K04M3_05420 721ffee439b2448465f90e1881979e36 466 Pfam PF01136 Peptidase family U32 80 355 2.5E-96 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_11270 478f2c1f7481ea9b66146ebf58df7465 148 Pfam PF05232 Chlorhexidine efflux transporter 4 63 9.4E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter K04M3_11270 478f2c1f7481ea9b66146ebf58df7465 148 Pfam PF05232 Chlorhexidine efflux transporter 69 131 9.5E-22 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 SUPERFAMILY SSF46785 9 91 6.19E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 2.8E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 Gene3D G3DSA:3.40.190.10 95 302 2.3E-40 T 12-10-2018 K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 Gene3D G3DSA:1.10.10.10 5 92 5.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 Pfam PF03466 LysR substrate binding domain 101 308 2.1E-17 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 SUPERFAMILY SSF53850 95 305 7.76E-32 T 12-10-2018 K04M3_15000 39af09a2015b0860d3e6bf24e67b761f 315 Gene3D G3DSA:3.40.190.10 180 278 2.3E-40 T 12-10-2018 K04M3_34890 cdd96a456c312aa15dc0a2d60eb2f121 322 SMART SM00972 93 157 3.4E-9 T 12-10-2018 IPR007893 Spore coat protein U K04M3_34890 cdd96a456c312aa15dc0a2d60eb2f121 322 SMART SM00972 253 319 7.9E-9 T 12-10-2018 IPR007893 Spore coat protein U K04M3_34890 cdd96a456c312aa15dc0a2d60eb2f121 322 Pfam PF05229 Spore Coat Protein U domain 18 156 7.7E-12 T 12-10-2018 IPR007893 Spore coat protein U K04M3_34890 cdd96a456c312aa15dc0a2d60eb2f121 322 Pfam PF05229 Spore Coat Protein U domain 182 318 6.8E-30 T 12-10-2018 IPR007893 Spore coat protein U K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 Gene3D G3DSA:3.40.50.150 178 358 2.2E-52 T 12-10-2018 K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 SUPERFAMILY SSF53335 186 302 1.23E-12 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.959 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 Gene3D G3DSA:3.30.2300.20 80 177 3.6E-39 T 12-10-2018 K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 Gene3D G3DSA:3.30.70.2810 1 79 5.7E-33 T 12-10-2018 K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 PIRSF PIRSF028774 1 362 4.1E-193 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 K04M3_06730 e0a565a6f31248d14009ad4b8c326769 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.8E-5 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 K04M3_12700 c4e9852b18785ca295774f019faa23a6 228 SUPERFAMILY SSF51306 101 225 6.28E-21 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily K04M3_12700 c4e9852b18785ca295774f019faa23a6 228 Pfam PF00717 Peptidase S24-like 143 209 4.8E-8 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C K04M3_12700 c4e9852b18785ca295774f019faa23a6 228 Gene3D G3DSA:2.10.109.10 97 224 2.5E-37 T 12-10-2018 K04M3_08900 b282c3b5e734783a2728a9c306dec301 85 Gene3D G3DSA:1.10.1200.10 3 85 1.5E-17 T 12-10-2018 IPR036736 ACP-like superfamily K04M3_08900 b282c3b5e734783a2728a9c306dec301 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 6.3E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain K04M3_08900 b282c3b5e734783a2728a9c306dec301 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.754 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 K04M3_08900 b282c3b5e734783a2728a9c306dec301 85 SUPERFAMILY SSF47336 4 83 1.26E-18 T 12-10-2018 IPR036736 ACP-like superfamily K04M3_06670 31b7547f0521d00136fbf980265572e2 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site K04M3_06670 31b7547f0521d00136fbf980265572e2 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.4E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_34150 3a5cda40c7dcbce2f82c89d7df035f6a 228 Gene3D G3DSA:1.10.287.70 123 227 4.9E-21 T 12-10-2018 K04M3_34150 3a5cda40c7dcbce2f82c89d7df035f6a 228 SUPERFAMILY SSF81324 126 220 1.57E-18 T 12-10-2018 K04M3_34150 3a5cda40c7dcbce2f82c89d7df035f6a 228 Pfam PF07885 Ion channel 134 217 1.3E-17 T 12-10-2018 IPR013099 Potassium channel domain K04M3_30180 78a3f6e8070777a9e9b4dbdc5f144d3e 209 Pfam PF00929 Exonuclease 31 193 3.4E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_30180 78a3f6e8070777a9e9b4dbdc5f144d3e 209 SMART SM00479 29 202 1.2E-26 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III K04M3_30180 78a3f6e8070777a9e9b4dbdc5f144d3e 209 Gene3D G3DSA:3.30.420.10 23 201 1.1E-33 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 K04M3_30180 78a3f6e8070777a9e9b4dbdc5f144d3e 209 SUPERFAMILY SSF53098 27 198 2.52E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily K04M3_42410 412778377e9696787ae33ebf77f48bde 303 SUPERFAMILY SSF103481 41 145 2.35E-12 T 12-10-2018 K04M3_42410 412778377e9696787ae33ebf77f48bde 303 Pfam PF00892 EamA-like transporter family 155 289 1.7E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_42410 412778377e9696787ae33ebf77f48bde 303 Pfam PF00892 EamA-like transporter family 7 142 3.5E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_42410 412778377e9696787ae33ebf77f48bde 303 SUPERFAMILY SSF103481 191 291 8.89E-8 T 12-10-2018 K04M3_10160 6a94091975d45a23bac44bbfcde47a72 106 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type K04M3_10160 6a94091975d45a23bac44bbfcde47a72 106 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 3.1E-6 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 K04M3_44670 efafe01de48c23f890ee5d6897fbe182 95 SUPERFAMILY SSF51197 17 94 1.57E-6 T 12-10-2018 K04M3_44670 efafe01de48c23f890ee5d6897fbe182 95 Gene3D G3DSA:2.60.120.330 8 95 8.8E-7 T 12-10-2018 IPR027443 Isopenicillin N synthase-like K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:1.25.40.10 71 241 1.1E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 Gene3D G3DSA:1.25.40.10 245 505 1.1E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SUPERFAMILY SSF48452 176 364 6.5E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 254 287 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 294 327 0.054 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 88 121 3.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 174 207 330.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SMART SM00028 334 367 31.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 K04M3_06770 583b5d021203bc8ef337a3def0a8cf11 760 SUPERFAMILY SSF48452 336 445 1.86E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 K04M3_31920 0f582d89b48b1ebe7c3bb3401fc3bbfd 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.341 T 12-10-2018 IPR007456 Smg K04M3_31920 0f582d89b48b1ebe7c3bb3401fc3bbfd 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 1.9E-58 T 12-10-2018 IPR007456 Smg K04M3_36570 278220cc3f2aeee3b68a4091e10ad2fd 361 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 221 4.1E-27 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) K04M3_36570 278220cc3f2aeee3b68a4091e10ad2fd 361 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 224 337 6.5E-15 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) K04M3_36570 278220cc3f2aeee3b68a4091e10ad2fd 361 Gene3D G3DSA:2.40.160.60 22 361 4.5E-60 T 12-10-2018 K04M3_36570 278220cc3f2aeee3b68a4091e10ad2fd 361 SUPERFAMILY SSF56935 22 335 6.59E-57 T 12-10-2018 K04M3_41830 6577dcb8be02bcd68aab34dfa0b42f10 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 9.2E-38 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 K04M3_41830 6577dcb8be02bcd68aab34dfa0b42f10 144 SUPERFAMILY SSF54637 1 137 2.34E-29 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_41830 6577dcb8be02bcd68aab34dfa0b42f10 144 Pfam PF03061 Thioesterase superfamily 52 128 1.8E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 K04M3_41830 6577dcb8be02bcd68aab34dfa0b42f10 144 Gene3D G3DSA:3.10.129.10 1 143 2.4E-56 T 12-10-2018 K04M3_19040 cbea9edf13c5c2c20f531c2fbec0c0f2 244 Pfam PF13737 Transposase DDE domain 19 129 2.1E-45 T 12-10-2018 IPR025668 Transposase DDE domain K04M3_26300 908322d874a90387473f48ca3eff1a22 289 Pfam PF01478 Type IV leader peptidase family 135 244 8.0E-28 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 K04M3_26300 908322d874a90387473f48ca3eff1a22 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 1.6E-32 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal K04M3_26300 908322d874a90387473f48ca3eff1a22 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial K04M3_26300 908322d874a90387473f48ca3eff1a22 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial K04M3_26300 908322d874a90387473f48ca3eff1a22 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial K04M3_26300 908322d874a90387473f48ca3eff1a22 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial K04M3_31200 ff8cbe407b022505d0bc5b5d112029de 156 Pfam PF01878 EVE domain 2 147 7.3E-56 T 12-10-2018 IPR002740 EVE domain K04M3_31200 ff8cbe407b022505d0bc5b5d112029de 156 Gene3D G3DSA:3.10.590.10 1 153 2.9E-66 T 12-10-2018 K04M3_31200 ff8cbe407b022505d0bc5b5d112029de 156 SUPERFAMILY SSF88697 1 149 1.63E-62 T 12-10-2018 IPR015947 PUA-like superfamily K04M3_22640 4eb5fd7c637b7574604ece06b1987a5e 368 Pfam PF01584 CheW-like domain 225 357 1.4E-15 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_22640 4eb5fd7c637b7574604ece06b1987a5e 368 SMART SM00260 221 355 2.9E-4 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 K04M3_22640 4eb5fd7c637b7574604ece06b1987a5e 368 PIRSF PIRSF020479 5 368 7.0E-134 T 12-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like K04M3_22640 4eb5fd7c637b7574604ece06b1987a5e 368 SUPERFAMILY SSF50341 223 358 1.83E-14 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 K04M3_39240 ae9e14bb3bc00832622413273548cbe0 106 Pfam PF00034 Cytochrome c 33 98 2.0E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_39240 ae9e14bb3bc00832622413273548cbe0 106 SUPERFAMILY SSF46626 32 102 2.47E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_39240 ae9e14bb3bc00832622413273548cbe0 106 Gene3D G3DSA:1.10.760.10 21 104 1.1E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_36170 ffd03d4dc31c04babd0c84092463de67 247 Gene3D G3DSA:3.30.1150.10 140 246 9.3E-22 T 12-10-2018 K04M3_36170 ffd03d4dc31c04babd0c84092463de67 247 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 168 245 4.7E-22 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 K04M3_36170 ffd03d4dc31c04babd0c84092463de67 247 SUPERFAMILY SSF74653 167 243 8.5E-22 T 12-10-2018 K04M3_36170 ffd03d4dc31c04babd0c84092463de67 247 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 169 245 3.5E-22 T 12-10-2018 IPR006260 TonB/TolA, C-terminal K04M3_33310 980831049e236773e315dbe9e808b704 317 SUPERFAMILY SSF51261 32 267 5.75E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_33310 980831049e236773e315dbe9e808b704 317 Pfam PF01551 Peptidase family M23 169 264 1.4E-29 T 12-10-2018 IPR016047 Peptidase M23 K04M3_33310 980831049e236773e315dbe9e808b704 317 Gene3D G3DSA:2.70.70.10 144 265 5.2E-42 T 12-10-2018 IPR011055 Duplicated hybrid motif K04M3_45990 996000b75863e006e4458773c483142a 223 Gene3D G3DSA:2.60.120.10 1 159 5.0E-66 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_45990 996000b75863e006e4458773c483142a 223 Pfam PF12973 ChrR Cupin-like domain 127 211 2.3E-29 T 12-10-2018 IPR025979 ChrR-like cupin domain K04M3_45990 996000b75863e006e4458773c483142a 223 Pfam PF12973 ChrR Cupin-like domain 18 108 1.0E-40 T 12-10-2018 IPR025979 ChrR-like cupin domain K04M3_45990 996000b75863e006e4458773c483142a 223 SUPERFAMILY SSF51182 2 127 7.98E-37 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_45990 996000b75863e006e4458773c483142a 223 SUPERFAMILY SSF51182 116 216 1.12E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_29170 95e8182f1fcd88b96058cb2d9a9863b8 226 Pfam PF08348 YheO-like PAS domain 17 125 8.2E-36 T 12-10-2018 IPR013559 YheO-like K04M3_29170 95e8182f1fcd88b96058cb2d9a9863b8 226 Pfam PF13309 HTH domain 160 217 1.6E-18 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain K04M3_29170 95e8182f1fcd88b96058cb2d9a9863b8 226 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 16 129 2.0E-61 T 12-10-2018 IPR013559 YheO-like K04M3_19600 36373b6abe146b0c223758bb925996ca 213 Pfam PF13505 Outer membrane protein beta-barrel domain 10 176 8.1E-13 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_19600 36373b6abe146b0c223758bb925996ca 213 Gene3D G3DSA:2.40.160.20 27 180 1.8E-12 T 12-10-2018 K04M3_19600 36373b6abe146b0c223758bb925996ca 213 SUPERFAMILY SSF56925 33 176 2.88E-17 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_43400 d71c5b30a379b0c8331714ab42dcca21 243 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 4.6E-54 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 K04M3_43400 d71c5b30a379b0c8331714ab42dcca21 243 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.1E-57 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 K04M3_02070 ca9734f4e6e4a9049a053829dabe6d72 372 Pfam PF00534 Glycosyl transferases group 1 199 353 3.0E-35 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 K04M3_02070 ca9734f4e6e4a9049a053829dabe6d72 372 SUPERFAMILY SSF53756 12 368 1.31E-62 T 12-10-2018 K04M3_02070 ca9734f4e6e4a9049a053829dabe6d72 372 Gene3D G3DSA:3.40.50.2000 23 359 2.3E-58 T 12-10-2018 K04M3_02070 ca9734f4e6e4a9049a053829dabe6d72 372 Gene3D G3DSA:3.40.50.2000 183 356 2.3E-58 T 12-10-2018 K04M3_02070 ca9734f4e6e4a9049a053829dabe6d72 372 Pfam PF13439 Glycosyltransferase Family 4 23 184 3.8E-7 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 K04M3_01490 fd98438c392222dafc366bc0ca917d0e 210 SUPERFAMILY SSF74653 122 207 7.72E-18 T 12-10-2018 K04M3_01490 fd98438c392222dafc366bc0ca917d0e 210 Gene3D G3DSA:3.30.1150.10 112 209 8.6E-21 T 12-10-2018 K04M3_01490 fd98438c392222dafc366bc0ca917d0e 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 3.0E-15 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 K04M3_01490 fd98438c392222dafc366bc0ca917d0e 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 1.2E-12 T 12-10-2018 IPR006260 TonB/TolA, C-terminal K04M3_40090 45c6da9691c878d8bd11540664f57b85 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 4.2E-147 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 K04M3_40090 45c6da9691c878d8bd11540664f57b85 443 PIRSF PIRSF004539 1 441 1.8E-185 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 K04M3_40090 45c6da9691c878d8bd11540664f57b85 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 7.6E-150 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 K04M3_47370 c7c1b2fe74cfdb5e8d2df22d68ff46f1 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 2.6E-12 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel K04M3_47370 c7c1b2fe74cfdb5e8d2df22d68ff46f1 183 Gene3D G3DSA:2.40.160.20 21 183 1.5E-16 T 12-10-2018 K04M3_47370 c7c1b2fe74cfdb5e8d2df22d68ff46f1 183 SUPERFAMILY SSF56925 22 183 2.88E-17 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel K04M3_47070 9f5a7ac3edfcccafd8a44d17f41a8f66 895 PIRSF PIRSF035905 1 895 8.7E-245 T 12-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein K04M3_47070 9f5a7ac3edfcccafd8a44d17f41a8f66 895 Pfam PF10101 Predicted membrane protein (DUF2339) 134 884 3.9E-100 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane K04M3_16520 c6caaad377202a62759922d3c4e2acb9 365 Gene3D G3DSA:1.10.3720.10 148 363 4.3E-48 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_16520 c6caaad377202a62759922d3c4e2acb9 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 6.4E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_16520 c6caaad377202a62759922d3c4e2acb9 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 8.1E-23 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 K04M3_16520 c6caaad377202a62759922d3c4e2acb9 365 SUPERFAMILY SSF161098 154 346 7.85E-41 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_00220 8405371f7a4d913fed46d111cbcb713b 175 SUPERFAMILY SSF52218 3 158 7.6E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_00220 8405371f7a4d913fed46d111cbcb713b 175 Gene3D G3DSA:3.40.50.360 2 121 1.6E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily K04M3_00220 8405371f7a4d913fed46d111cbcb713b 175 Pfam PF12724 Flavodoxin domain 5 153 1.7E-50 T 12-10-2018 IPR026816 Flavodoxin domain K04M3_41750 af6f0f08e59117275143608801cfa5f2 551 SUPERFAMILY SSF52540 227 410 1.86E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_41750 af6f0f08e59117275143608801cfa5f2 551 Pfam PF09818 Predicted ATPase of the ABC class 1 435 7.2E-188 T 12-10-2018 IPR019195 ABC transporter, ATPase, putative K04M3_47770 380d2e519e7b23f613fd7b2befca8e3c 337 SUPERFAMILY SSF55073 183 335 2.9E-45 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_47770 380d2e519e7b23f613fd7b2befca8e3c 337 SMART SM00267 167 337 5.6E-55 T 12-10-2018 IPR000160 GGDEF domain K04M3_47770 380d2e519e7b23f613fd7b2befca8e3c 337 Gene3D G3DSA:3.30.70.270 164 336 5.3E-53 T 12-10-2018 K04M3_47770 380d2e519e7b23f613fd7b2befca8e3c 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 4.0E-43 T 12-10-2018 IPR000160 GGDEF domain K04M3_47770 380d2e519e7b23f613fd7b2befca8e3c 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 1.6E-43 T 12-10-2018 IPR000160 GGDEF domain K04M3_01100 53bf91d9a3df8c26bf6c7952c87d66fd 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 1.6E-90 T 12-10-2018 IPR021342 Protein of unknown function DUF2959 K04M3_13200 e80b77d21e1a3c0c8b27b77c6654379d 359 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 40 350 53.971 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 K04M3_13200 e80b77d21e1a3c0c8b27b77c6654379d 359 Pfam PF05971 Protein of unknown function (DUF890) 39 348 5.5E-130 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 K04M3_13200 e80b77d21e1a3c0c8b27b77c6654379d 359 SUPERFAMILY SSF53335 78 348 6.76E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_13200 e80b77d21e1a3c0c8b27b77c6654379d 359 PIRSF PIRSF029038 29 359 2.5E-160 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 K04M3_13200 e80b77d21e1a3c0c8b27b77c6654379d 359 Gene3D G3DSA:3.40.50.150 73 348 1.2E-78 T 12-10-2018 K04M3_05880 254440c0eee178608ec8f952943abb21 74 Pfam PF07191 zinc-ribbons 5 68 6.7E-27 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 K04M3_05880 254440c0eee178608ec8f952943abb21 74 SUPERFAMILY SSF161187 3 70 2.35E-26 T 12-10-2018 K04M3_05880 254440c0eee178608ec8f952943abb21 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 1.0E-27 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 K04M3_05880 254440c0eee178608ec8f952943abb21 74 Gene3D G3DSA:2.10.290.10 2 71 2.4E-26 T 12-10-2018 IPR029037 YfgJ-like K04M3_35390 9cf95e17f3078f1f96042f80029a7b28 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 3.4E-36 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 K04M3_06150 4486b34fbde13e310a3b10c0c9d386d7 455 Pfam PF03553 Na+/H+ antiporter family 17 219 4.6E-13 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_11620 cca900b5bac8573a19626b5e788cf305 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 2.3E-7 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 K04M3_40780 d8b081ebbe575adaa378832cc9ad35e0 775 Gene3D G3DSA:3.40.50.300 1 262 2.6E-18 T 12-10-2018 K04M3_40780 d8b081ebbe575adaa378832cc9ad35e0 775 SUPERFAMILY SSF52540 1 283 5.69E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_40780 d8b081ebbe575adaa378832cc9ad35e0 775 Pfam PF13476 AAA domain 5 205 8.0E-13 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain K04M3_14620 f9d00ef380c678ec48ddda68d17a10df 361 SUPERFAMILY SSF161098 136 318 4.97E-41 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_14620 f9d00ef380c678ec48ddda68d17a10df 361 Gene3D G3DSA:1.10.3720.10 134 322 2.2E-36 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_14620 f9d00ef380c678ec48ddda68d17a10df 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 318 3.9E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_49880 f46d0e1cfc02d4aabb8510e3cfae76b3 901 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 415 702 1.3E-24 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 K04M3_32930 f46d0e1cfc02d4aabb8510e3cfae76b3 901 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 415 702 1.3E-24 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 K04M3_09170 a7f02741a23b19e5b22890165846ee0e 97 SUPERFAMILY SSF47781 31 97 4.78E-28 T 12-10-2018 IPR010994 RuvA domain 2-like K04M3_09170 a7f02741a23b19e5b22890165846ee0e 97 Pfam PF12836 Helix-hairpin-helix motif 35 95 4.5E-23 T 12-10-2018 K04M3_09170 a7f02741a23b19e5b22890165846ee0e 97 Gene3D G3DSA:1.10.150.280 25 97 6.9E-24 T 12-10-2018 K04M3_09170 a7f02741a23b19e5b22890165846ee0e 97 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 35 97 5.8E-28 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain K04M3_09170 a7f02741a23b19e5b22890165846ee0e 97 SMART SM00278 45 64 5.2 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_09170 a7f02741a23b19e5b22890165846ee0e 97 SMART SM00278 75 94 88.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 K04M3_16150 0a58b36277ab27fa77b1117c674d87bb 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 3.3E-10 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component K04M3_10630 3c46066643df27f3554bef9c405eea06 329 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 14 328 9.3E-87 T 12-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain K04M3_20360 fa0eef3f7daf97dcaebd861e4ddd2df8 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 2.4E-18 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 K04M3_52770 290391166646c7548c502448526c7f72 430 SUPERFAMILY SSF52540 117 421 1.09E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_52770 290391166646c7548c502448526c7f72 430 Pfam PF13614 AAA domain 117 339 1.3E-14 T 12-10-2018 IPR025669 AAA domain K04M3_52770 290391166646c7548c502448526c7f72 430 Gene3D G3DSA:3.40.50.300 117 424 2.5E-41 T 12-10-2018 K04M3_36330 d7283a5449851cf62937bad05ad0935d 258 SUPERFAMILY SSF51658 1 258 6.91E-83 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily K04M3_36330 d7283a5449851cf62937bad05ad0935d 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.2E-34 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain K04M3_36330 d7283a5449851cf62937bad05ad0935d 258 Gene3D G3DSA:3.20.20.150 1 258 2.0E-78 T 12-10-2018 K04M3_36330 d7283a5449851cf62937bad05ad0935d 258 PIRSF PIRSF006241 1 258 5.4E-98 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like K04M3_18000 c4496ce6104e44813fe972343f3709c7 181 SUPERFAMILY SSF55729 3 174 5.03E-51 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_18000 c4496ce6104e44813fe972343f3709c7 181 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 1.2E-32 T 12-10-2018 IPR000182 GNAT domain K04M3_18000 c4496ce6104e44813fe972343f3709c7 181 Gene3D G3DSA:3.40.630.30 3 175 1.1E-49 T 12-10-2018 K04M3_43640 933b93f24c03360c4b3c5764e887d41b 144 Gene3D G3DSA:1.10.490.10 1 131 8.5E-31 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 K04M3_43640 933b93f24c03360c4b3c5764e887d41b 144 SUPERFAMILY SSF46458 4 132 1.22E-29 T 12-10-2018 IPR009050 Globin-like superfamily K04M3_42470 7edfbadb0747f1381a12245fcda72fb0 286 Pfam PF15575 Immunity protein 49 94 276 1.4E-23 T 12-10-2018 IPR029074 Immunity protein 49 K04M3_40450 8208a4b220236c82014f82c4ac536578 124 Pfam PF04076 Bacterial OB fold (BOF) protein 51 121 1.7E-9 T 12-10-2018 IPR005220 Bacterial OB-fold K04M3_40450 8208a4b220236c82014f82c4ac536578 124 Gene3D G3DSA:2.40.50.200 18 124 5.9E-17 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily K04M3_40450 8208a4b220236c82014f82c4ac536578 124 SUPERFAMILY SSF101756 25 123 4.45E-22 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily K04M3_41820 73d7b1afcce005212d873a8169fa40ea 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.0E-32 T 12-10-2018 IPR021811 Protein of unknown function DUF3389 K04M3_28150 6eb9a1109f0ee43da07706c469d36c10 481 SUPERFAMILY SSF111283 18 480 6.02E-129 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 K04M3_28150 6eb9a1109f0ee43da07706c469d36c10 481 PIRSF PIRSF004919 14 481 1.1E-142 T 12-10-2018 IPR025502 TldD K04M3_28150 6eb9a1109f0ee43da07706c469d36c10 481 Gene3D G3DSA:3.30.2290.10 7 238 7.9E-16 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal K04M3_28150 6eb9a1109f0ee43da07706c469d36c10 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.1E-65 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 K04M3_09480 6235e4f7a47dbe1684318741e50eba59 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 2.7E-43 T 12-10-2018 IPR039366 YscW/ExsB K04M3_01120 5ff39052849e4f52dca2b2c7723cdc03 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.9E-50 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 K04M3_01120 5ff39052849e4f52dca2b2c7723cdc03 144 SUPERFAMILY SSF69500 2 143 1.83E-52 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily K04M3_01120 5ff39052849e4f52dca2b2c7723cdc03 144 Gene3D G3DSA:3.50.80.10 1 144 8.5E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily K04M3_01120 5ff39052849e4f52dca2b2c7723cdc03 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.7E-62 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 K04M3_01120 5ff39052849e4f52dca2b2c7723cdc03 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.322 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 K04M3_44310 62fddf107763376c3d9bae4b437af379 485 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 4.5E-35 T 12-10-2018 IPR025425 Domain of unknown function DUF4150 K04M3_37840 2b2b00c88801ec545e06122d287ea867 279 SUPERFAMILY SSF52768 40 249 2.88E-19 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily K04M3_37840 2b2b00c88801ec545e06122d287ea867 279 Gene3D G3DSA:3.40.800.10 97 217 6.8E-9 T 12-10-2018 K04M3_23340 cb127b235e58cedf7422616610e853f7 216 Pfam PF13395 HNH endonuclease 60 110 9.0E-6 T 12-10-2018 IPR003615 HNH nuclease K04M3_23340 cb127b235e58cedf7422616610e853f7 216 Gene3D G3DSA:3.30.40.60 10 129 6.2E-9 T 12-10-2018 K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 294 1.7E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 Gene3D G3DSA:3.40.50.300 1 321 1.5E-97 T 12-10-2018 K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 313 5.2E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 SMART SM00382 30 228 4.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 Pfam PF00005 ABC transporter 22 178 4.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 K04M3_13380 3648e4af979ca35abfa45487810c7d4c 327 SUPERFAMILY SSF52540 1 249 1.47E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_41440 cde3ef60222a1cb19612d184fa1d8cbc 147 Pfam PF12472 Phage related protein 63 119 9.1E-20 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 K04M3_42160 6cb49e330e61bdede43d2dbf73c2552f 218 Pfam PF07947 YhhN family 24 204 1.5E-41 T 12-10-2018 IPR012506 YhhN-like GO:0016021 K04M3_18670 e1c270f9ed8eba71386197cb0cceb5e0 281 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 3 275 6.2E-64 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 K04M3_45840 72480b5ed0b171740c6248a931245532 157 Pfam PF08534 Redoxin 4 154 4.6E-38 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 K04M3_45840 72480b5ed0b171740c6248a931245532 157 Gene3D G3DSA:3.40.30.10 2 157 9.6E-60 T 12-10-2018 K04M3_45840 72480b5ed0b171740c6248a931245532 157 SUPERFAMILY SSF52833 1 156 2.01E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_05870 a283db336c46811c4afc155cdb2069e5 311 SUPERFAMILY SSF55186 141 291 1.57E-14 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 K04M3_38270 4e8b981c138af0fc61e2405975dd7c07 379 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 2.2E-104 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 K04M3_38270 4e8b981c138af0fc61e2405975dd7c07 379 Gene3D G3DSA:3.90.226.10 5 375 8.9E-112 T 12-10-2018 K04M3_38270 4e8b981c138af0fc61e2405975dd7c07 379 SUPERFAMILY SSF52096 18 343 1.3E-53 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily K04M3_01970 6fdb76f5cc4adc828504d19ba19b31b1 731 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 715 8.3E-245 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH K04M3_32460 5c6c968c41e335a1119348265a26e8f6 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 1.2E-124 T 12-10-2018 IPR005646 Flagellar assembly protein A K04M3_17970 70533786331fb1a2763044eaa5c103d5 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 69 1.0E-9 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain K04M3_17970 70533786331fb1a2763044eaa5c103d5 98 Gene3D G3DSA:3.30.70.100 3 96 9.6E-11 T 12-10-2018 K04M3_17970 70533786331fb1a2763044eaa5c103d5 98 SUPERFAMILY SSF54909 1 71 1.25E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 Gene3D G3DSA:3.40.190.10 92 297 8.2E-16 T 12-10-2018 K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 Gene3D G3DSA:1.10.10.10 1 91 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 Pfam PF03466 LysR substrate binding domain 98 255 1.9E-10 T 12-10-2018 IPR005119 LysR, substrate-binding K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 SUPERFAMILY SSF53850 92 301 2.35E-18 T 12-10-2018 K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 Gene3D G3DSA:3.40.190.10 173 274 8.2E-16 T 12-10-2018 K04M3_00490 11da1be2395321244f1e37016fd01b9a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 K04M3_52500 39733721419c315f4e64869ed0b4b528 643 Pfam PF11826 Protein of unknown function (DUF3346) 332 510 7.1E-7 T 12-10-2018 IPR021781 Protein of unknown function DUF3346 K04M3_16260 398026b55d6ee9ac389e84abf0447d8f 57 Gene3D G3DSA:1.10.10.620 1 57 4.0E-29 T 12-10-2018 IPR023200 Ribosome modulation factor domain superfamily K04M3_16260 398026b55d6ee9ac389e84abf0447d8f 57 Pfam PF04957 Ribosome modulation factor 1 54 3.3E-28 T 12-10-2018 IPR007040 Ribosome modulation factor K04M3_16260 398026b55d6ee9ac389e84abf0447d8f 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.734 T 12-10-2018 IPR007040 Ribosome modulation factor K04M3_16260 398026b55d6ee9ac389e84abf0447d8f 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-22 T 12-10-2018 IPR007040 Ribosome modulation factor K04M3_02450 f9f8e9954b67112d38598b5d4c274e96 83 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 76 4.7E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 K04M3_02450 f9f8e9954b67112d38598b5d4c274e96 83 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 80 9.4E-23 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 K04M3_02450 f9f8e9954b67112d38598b5d4c274e96 83 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 83 25.485 T 12-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 K04M3_13930 c6f98ff47e77636fb29fb2126f2c3fdf 85 Pfam PF07007 Lysozyme inhibitor LprI 4 71 2.5E-14 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal K04M3_13930 c6f98ff47e77636fb29fb2126f2c3fdf 85 Gene3D G3DSA:1.20.1270.180 1 78 1.5E-15 T 12-10-2018 K04M3_34100 81118dd98e559b6c4e0327a3e8e9affe 150 Gene3D G3DSA:3.10.129.10 2 138 3.4E-38 T 12-10-2018 K04M3_34100 81118dd98e559b6c4e0327a3e8e9affe 150 SUPERFAMILY SSF54637 4 138 2.92E-33 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_34100 81118dd98e559b6c4e0327a3e8e9affe 150 Pfam PF13279 Thioesterase-like superfamily 16 134 3.0E-20 T 12-10-2018 K04M3_43300 f253524c9f66ec1ad7c751458958747d 93 Gene3D G3DSA:3.30.310.50 1 93 2.7E-23 T 12-10-2018 K04M3_43300 f253524c9f66ec1ad7c751458958747d 93 PIRSF PIRSF028291 1 93 1.1E-27 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 K04M3_43300 f253524c9f66ec1ad7c751458958747d 93 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 91 1.0E-25 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 K04M3_16850 173f0b4ce18729001c932c5c3dc60879 262 Gene3D G3DSA:3.40.190.10 33 252 4.5E-70 T 12-10-2018 K04M3_16850 173f0b4ce18729001c932c5c3dc60879 262 SMART SM00062 32 255 5.9E-59 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_16850 173f0b4ce18729001c932c5c3dc60879 262 SMART SM00079 32 254 4.4E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 K04M3_16850 173f0b4ce18729001c932c5c3dc60879 262 SUPERFAMILY SSF53850 1 255 1.77E-70 T 12-10-2018 K04M3_16850 173f0b4ce18729001c932c5c3dc60879 262 Gene3D G3DSA:3.40.190.10 117 214 4.5E-70 T 12-10-2018 K04M3_16850 173f0b4ce18729001c932c5c3dc60879 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 5.0E-60 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF K04M3_34880 80b7ab87ceaf57fbb094d4342de04906 808 Gene3D G3DSA:2.60.40.3110 247 336 3.6E-9 T 12-10-2018 K04M3_34880 80b7ab87ceaf57fbb094d4342de04906 808 Pfam PF00577 Outer membrane usher protein 223 699 8.3E-33 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 K04M3_34880 80b7ab87ceaf57fbb094d4342de04906 808 Gene3D G3DSA:2.60.40.2610 627 716 1.7E-7 T 12-10-2018 K04M3_16060 4464c7f398e6e1b92b7a38b90e837bb2 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 1.4E-53 T 12-10-2018 IPR021370 Protein of unknown function DUF2987 K04M3_17550 3cddc915bc1ab8684d18cb7b5608d567 326 Pfam PF16806 Antiactivator protein ExsD 52 309 1.9E-78 T 12-10-2018 IPR031835 Antiactivator protein ExsD K04M3_46070 472c043c330671c420d177b1cb002004 236 SUPERFAMILY SSF55681 4 232 5.57E-45 T 12-10-2018 K04M3_46070 472c043c330671c420d177b1cb002004 236 Gene3D G3DSA:3.30.930.10 3 236 1.7E-42 T 12-10-2018 K04M3_05030 5dfa25f8c994f9a535db0c8036cae11d 143 Gene3D G3DSA:2.40.10.330 72 128 5.9E-43 T 12-10-2018 K04M3_05030 5dfa25f8c994f9a535db0c8036cae11d 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 8.2E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain K04M3_05030 5dfa25f8c994f9a535db0c8036cae11d 143 SUPERFAMILY SSF54534 4 142 2.36E-36 T 12-10-2018 K04M3_05030 5dfa25f8c994f9a535db0c8036cae11d 143 Gene3D G3DSA:3.10.50.40 13 140 5.9E-43 T 12-10-2018 K04M3_49310 62a30c9d7a267cadb68899432c2578a6 266 Gene3D G3DSA:3.40.50.1360 1 266 4.4E-119 T 12-10-2018 K04M3_49310 62a30c9d7a267cadb68899432c2578a6 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 K04M3_49310 62a30c9d7a267cadb68899432c2578a6 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.6E-141 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 K04M3_49310 62a30c9d7a267cadb68899432c2578a6 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 218 1.5E-20 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 K04M3_49310 62a30c9d7a267cadb68899432c2578a6 266 SUPERFAMILY SSF100950 1 263 4.37E-103 T 12-10-2018 IPR037171 NagB/RpiA transferase-like K04M3_49310 62a30c9d7a267cadb68899432c2578a6 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.11 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 K04M3_04460 b82483194ad99dec0cb6d606d5ec33be 206 Pfam PF03458 UPF0126 domain 95 166 4.0E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 K04M3_04460 b82483194ad99dec0cb6d606d5ec33be 206 Pfam PF03458 UPF0126 domain 8 81 5.3E-22 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 K04M3_05410 2aaaed96492d94ef19dbb47f4505e3e2 71 Gene3D G3DSA:3.30.70.20 1 70 4.0E-27 T 12-10-2018 K04M3_05410 2aaaed96492d94ef19dbb47f4505e3e2 71 SUPERFAMILY SSF54862 1 60 2.51E-12 T 12-10-2018 K04M3_44380 c4eda3fc6e22605e2c793a50e6b03448 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 7.9E-172 T 12-10-2018 IPR017731 Type VI secretion system, IcmF K04M3_44380 c4eda3fc6e22605e2c793a50e6b03448 1129 Pfam PF14331 ImcF-related N-terminal domain 154 407 7.5E-47 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain K04M3_44380 c4eda3fc6e22605e2c793a50e6b03448 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 755 3.0E-43 T 12-10-2018 IPR009612 ImcF-related K04M3_44380 c4eda3fc6e22605e2c793a50e6b03448 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 3.0E-48 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal K04M3_12900 a5c9941b7443023f0e88eefab80517ff 92 Pfam PF13856 ATP-binding sugar transporter from pro-phage 5 86 2.6E-5 T 12-10-2018 IPR025601 ATP-binding sugar transporter-like protein K04M3_12900 a5c9941b7443023f0e88eefab80517ff 92 SUPERFAMILY SSF69279 2 82 9.86E-10 T 12-10-2018 K04M3_41910 9035a96995e12663e29fdafcc432b61e 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 7.0E-106 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 K04M3_41910 9035a96995e12663e29fdafcc432b61e 339 Pfam PF03741 Integral membrane protein TerC family 92 293 3.0E-54 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 K04M3_22520 d30ef71d0e51854814ef4b8940a01c1b 274 Pfam PF04333 MlaA lipoprotein 57 249 4.6E-62 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 K04M3_22520 d30ef71d0e51854814ef4b8940a01c1b 274 PRINTS PR01805 VacJ lipoprotein signature 165 182 3.1E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 K04M3_22520 d30ef71d0e51854814ef4b8940a01c1b 274 PRINTS PR01805 VacJ lipoprotein signature 128 145 3.1E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 K04M3_22520 d30ef71d0e51854814ef4b8940a01c1b 274 PRINTS PR01805 VacJ lipoprotein signature 59 72 3.1E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 K04M3_22520 d30ef71d0e51854814ef4b8940a01c1b 274 PRINTS PR01805 VacJ lipoprotein signature 77 93 3.1E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 K04M3_25200 9723ae1f2b2d42c9158a68e5901098a6 394 Pfam PF05940 NnrS protein 16 388 6.3E-107 T 12-10-2018 IPR010266 NnrS K04M3_49470 dbcf2d0c9e29e45d93587bb9f1d7bc40 422 Pfam PF02687 FtsX-like permease family 315 411 1.1E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_49470 dbcf2d0c9e29e45d93587bb9f1d7bc40 422 Pfam PF12704 MacB-like periplasmic core domain 23 249 3.5E-16 T 12-10-2018 IPR025857 MacB-like periplasmic core domain K04M3_44660 c7d3ec65178e95d499de1005f0bd0ecd 432 SUPERFAMILY SSF53335 161 277 6.8E-9 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase K04M3_44660 c7d3ec65178e95d499de1005f0bd0ecd 432 Gene3D G3DSA:3.40.50.150 131 277 7.5E-10 T 12-10-2018 K04M3_40540 f5f2985dd69166ad477835bf63d8c61d 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.7E-38 T 12-10-2018 IPR018772 Transcription activator HlyU K04M3_41600 a89aa34f666d72a6a06ec1c89d36b2cd 189 Gene3D G3DSA:3.30.70.1070 89 180 2.1E-21 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_41600 a89aa34f666d72a6a06ec1c89d36b2cd 189 SUPERFAMILY SSF110997 99 162 5.89E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 K04M3_41600 a89aa34f666d72a6a06ec1c89d36b2cd 189 Pfam PF05036 Sporulation related domain 99 171 1.5E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 4.0E-76 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_37000 163ef1164d5e998f7056df72d72dfd7e 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 9.3E-36 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 K04M3_32000 7cdc07af7343891e7443ad1090b7e820 194 Pfam PF11355 Protein of unknown function (DUF3157) 2 193 1.2E-74 T 12-10-2018 IPR021501 Protein of unknown function DUF3157 K04M3_40790 7d94ecc66e2016763b2872ca93f4a79f 242 SUPERFAMILY SSF52540 30 212 7.22E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_40790 7d94ecc66e2016763b2872ca93f4a79f 242 Gene3D G3DSA:3.40.50.300 4 218 2.7E-15 T 12-10-2018 K04M3_42710 d8c6452a0a675ff994e16980c8b41ee3 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 2.7E-32 T 12-10-2018 IPR011979 Conserved hypothetical protein CHP02293 K04M3_42710 d8c6452a0a675ff994e16980c8b41ee3 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 1.9E-15 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 K04M3_47250 140b26a7bc7af8fa59b836f0c1eecda3 88 Pfam PF03891 Domain of unknown function (DUF333) 34 78 9.6E-18 T 12-10-2018 IPR005590 Protein of unknown function DUF333 K04M3_15510 d31401c3b46f2b5c85faab4618b41270 228 Gene3D G3DSA:3.40.50.300 3 195 1.4E-26 T 12-10-2018 K04M3_15510 d31401c3b46f2b5c85faab4618b41270 228 SUPERFAMILY SSF52540 23 204 9.79E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_26890 1111da880c297d69c373d32854adec35 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 4.3E-31 T 12-10-2018 K04M3_26890 1111da880c297d69c373d32854adec35 156 PIRSF PIRSF004923 1 156 3.4E-38 T 12-10-2018 IPR026268 Protein RseC K04M3_31100 b54f22e31e641f30473e93853129735a 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 4.1E-24 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 K04M3_31100 b54f22e31e641f30473e93853129735a 109 Gene3D G3DSA:2.40.50.660 32 108 1.4E-7 T 12-10-2018 K04M3_33090 4489a6ae359074f0b0c600ef708f6a7c 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 1.1E-37 T 12-10-2018 IPR021724 Protein of unknown function DUF3297 K04M3_23870 6c4f60250dd836e8db29744b78c0c249 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 41.895 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 K04M3_23870 6c4f60250dd836e8db29744b78c0c249 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 9.7E-145 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 K04M3_23870 6c4f60250dd836e8db29744b78c0c249 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 3.7E-131 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 K04M3_23870 6c4f60250dd836e8db29744b78c0c249 379 SUPERFAMILY SSF53756 6 379 7.71E-28 T 12-10-2018 K04M3_00810 b211d686bb51a1e4c5697a4a9bc5118d 356 Pfam PF01594 AI-2E family transporter 17 333 1.2E-46 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like K04M3_06820 12e7e96c62f5856c867f2bd875f4b4b5 225 SUPERFAMILY SSF161098 15 210 8.24E-47 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_06820 12e7e96c62f5856c867f2bd875f4b4b5 225 Gene3D G3DSA:1.10.3720.10 12 225 4.2E-51 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_06820 12e7e96c62f5856c867f2bd875f4b4b5 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 3.6E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_24170 e03b23710a7977133e446d3cfbd1cee4 528 Pfam PF03806 AbgT putative transporter family 19 526 1.5E-225 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 K04M3_11790 e0ec9918ef7ea7cea93c175fc26a929b 220 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 1.0E-83 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 K04M3_29990 1c9e09feb4b5a684163a4aea6e55b81f 170 Gene3D G3DSA:1.20.120.1490 36 154 4.5E-28 T 12-10-2018 K04M3_29990 1c9e09feb4b5a684163a4aea6e55b81f 170 PIRSF PIRSF034445 1 159 7.0E-23 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 K04M3_29990 1c9e09feb4b5a684163a4aea6e55b81f 170 Pfam PF07813 LTXXQ motif family protein 39 149 1.8E-22 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 K04M3_31090 aeaf47241d5f1500f165afd332b08f6a 122 Pfam PF13643 Domain of unknown function (DUF4145) 9 73 6.1E-5 T 12-10-2018 IPR025285 Domain of unknown function DUF4145 K04M3_11520 0e7bfb34e927bea0192b080e267d3acd 286 SUPERFAMILY SSF158855 34 283 1.03E-58 T 12-10-2018 K04M3_11520 0e7bfb34e927bea0192b080e267d3acd 286 Pfam PF03280 Proteobacterial lipase chaperone protein 88 272 3.3E-39 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 K04M3_33790 09c4da7800da465dc6e24542cabcea66 238 Gene3D G3DSA:3.40.30.10 68 238 4.4E-34 T 12-10-2018 K04M3_33790 09c4da7800da465dc6e24542cabcea66 238 Pfam PF13462 Thioredoxin 77 234 1.6E-17 T 12-10-2018 IPR012336 Thioredoxin-like fold K04M3_33790 09c4da7800da465dc6e24542cabcea66 238 SUPERFAMILY SSF52833 69 233 1.06E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily K04M3_46150 4a514875187a4b44b539c6c9d14b3c7d 170 SUPERFAMILY SSF51182 28 140 1.3E-22 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily K04M3_46150 4a514875187a4b44b539c6c9d14b3c7d 170 Pfam PF12973 ChrR Cupin-like domain 28 105 8.3E-8 T 12-10-2018 IPR025979 ChrR-like cupin domain K04M3_46150 4a514875187a4b44b539c6c9d14b3c7d 170 Gene3D G3DSA:2.60.120.10 13 159 1.8E-47 T 12-10-2018 IPR014710 RmlC-like jelly roll fold K04M3_08460 d04c4f31908b1ddcea30c96b8cbdcc1d 261 SUPERFAMILY SSF81345 2 253 1.44E-38 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_08460 d04c4f31908b1ddcea30c96b8cbdcc1d 261 Gene3D G3DSA:1.10.3470.10 28 253 6.0E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like K04M3_08460 d04c4f31908b1ddcea30c96b8cbdcc1d 261 Pfam PF00950 ABC 3 transport family 1 256 1.0E-73 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 K04M3_17160 a00047ea60ebbe0309d82af471a3cecc 334 Pfam PF05844 YopD protein 66 331 7.9E-36 T 12-10-2018 IPR008898 YopD-like K04M3_24530 693d9d99a94f26da844f3db2a70fadf6 193 Pfam PF11140 Protein of unknown function (DUF2913) 8 181 3.8E-21 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 K04M3_37150 e4e94d974686f1e405b8549b6bcb1a70 323 Gene3D G3DSA:2.40.160.10 22 323 1.2E-61 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_37150 e4e94d974686f1e405b8549b6bcb1a70 323 Pfam PF13609 Gram-negative porin 11 293 2.6E-27 T 12-10-2018 K04M3_37150 e4e94d974686f1e405b8549b6bcb1a70 323 SUPERFAMILY SSF56935 22 323 2.75E-50 T 12-10-2018 K04M3_17250 a8b0385c521fdd261382e0d65ed0a099 124 Pfam PF05932 Tir chaperone protein (CesT) family 9 115 5.4E-5 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 K04M3_17250 a8b0385c521fdd261382e0d65ed0a099 124 SUPERFAMILY SSF69635 2 122 5.49E-45 T 12-10-2018 K04M3_17250 a8b0385c521fdd261382e0d65ed0a099 124 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 2.9E-45 T 12-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 K04M3_17250 a8b0385c521fdd261382e0d65ed0a099 124 Gene3D G3DSA:3.30.1460.10 1 124 7.8E-50 T 12-10-2018 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 157 175 4.9E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 4.9E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 4.9E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 4.9E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 4.9E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 4.9E-32 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 PIRSF PIRSF000345 4 332 1.1E-100 T 12-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 K04M3_42980 2e13f9444275e91d366a07846d9246f6 374 Pfam PF00487 Fatty acid desaturase 45 262 8.9E-21 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 K04M3_09820 91520cf93ffff689179326ff24e39c25 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 10 205 2.3E-9 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 K04M3_47960 b2379450bb581d0869d55cff38773936 336 Gene3D G3DSA:3.40.190.10 120 263 6.5E-90 T 12-10-2018 K04M3_47960 b2379450bb581d0869d55cff38773936 336 SUPERFAMILY SSF53850 29 327 3.26E-64 T 12-10-2018 K04M3_47960 b2379450bb581d0869d55cff38773936 336 Gene3D G3DSA:3.40.190.10 32 326 6.5E-90 T 12-10-2018 K04M3_47960 b2379450bb581d0869d55cff38773936 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 1.3E-108 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family K04M3_47960 b2379450bb581d0869d55cff38773936 336 Pfam PF16868 NMT1-like family 32 326 7.9E-112 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family K04M3_01770 aa2c981a09fc27fd223358bdddfea3a3 351 Gene3D G3DSA:3.40.50.2000 4 155 2.3E-23 T 12-10-2018 K04M3_01770 aa2c981a09fc27fd223358bdddfea3a3 351 SUPERFAMILY SSF53756 9 345 4.24E-79 T 12-10-2018 K04M3_01770 aa2c981a09fc27fd223358bdddfea3a3 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 303 1.1E-53 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 K04M3_01770 aa2c981a09fc27fd223358bdddfea3a3 351 Gene3D G3DSA:3.40.50.2000 159 346 5.4E-37 T 12-10-2018 K04M3_11310 16db2b59f162365db6a9323d2930376c 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 2.6E-71 T 12-10-2018 IPR005226 UPF0014 family K04M3_43500 8b06f27c9b5da076d4d239e550b9a977 213 Pfam PF13645 L,D-transpeptidase catalytic domain 50 211 9.8E-66 T 12-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase K04M3_07540 d15ca1d871da3aeb79b44ad6fae47844 373 SUPERFAMILY SSF56935 44 373 2.17E-40 T 12-10-2018 K04M3_07540 d15ca1d871da3aeb79b44ad6fae47844 373 Pfam PF13609 Gram-negative porin 10 342 2.5E-34 T 12-10-2018 K04M3_07540 d15ca1d871da3aeb79b44ad6fae47844 373 Gene3D G3DSA:2.40.160.10 44 373 3.5E-43 T 12-10-2018 IPR023614 Porin domain superfamily K04M3_32010 4914f074f185b6f0cf794da2ac928847 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 3.2E-69 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 K04M3_32010 4914f074f185b6f0cf794da2ac928847 217 Pfam PF03006 Haemolysin-III related 10 207 1.5E-38 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 K04M3_40300 2f7a684d90326b54f9e371d5e76e84f5 149 Pfam PF04224 Protein of unknown function, DUF417 2 145 1.7E-41 T 12-10-2018 IPR007339 Inner membrane protein RclC-like K04M3_40300 2f7a684d90326b54f9e371d5e76e84f5 149 PIRSF PIRSF028065 1 149 2.8E-70 T 12-10-2018 IPR016865 Inner membrane protein RclC K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.462 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 Pfam PF01259 SAICAR synthetase 22 293 1.3E-47 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 Gene3D G3DSA:3.30.470.20 130 292 2.1E-14 T 12-10-2018 K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 Gene3D G3DSA:3.30.200.20 12 129 1.1E-24 T 12-10-2018 K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 3.5E-214 T 12-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 K04M3_12190 7e2b987a3a30354020c2c117ea82a706 367 SUPERFAMILY SSF56104 14 344 5.89E-67 T 12-10-2018 K04M3_12510 5a086e8351a1a868deb6fcbd889344cf 259 Gene3D G3DSA:3.30.460.10 74 196 1.8E-6 T 12-10-2018 K04M3_12510 5a086e8351a1a868deb6fcbd889344cf 259 SUPERFAMILY SSF81301 65 224 1.63E-15 T 12-10-2018 K04M3_36820 a8ace839939bac8d5d0ef79a2bafb905 120 SUPERFAMILY SSF55298 1 116 7.07E-27 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_36820 a8ace839939bac8d5d0ef79a2bafb905 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 4.9E-20 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 K04M3_36820 a8ace839939bac8d5d0ef79a2bafb905 120 Gene3D G3DSA:3.30.1330.40 1 118 7.7E-30 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 K04M3_02080 80cfefd1d8857adff4dfb2513ea5aea4 322 Pfam PF14897 EpsG family 16 308 1.6E-10 T 12-10-2018 K04M3_12110 66a6dab6f4e5012e2356ea4c2c59ba85 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 2.0E-96 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 K04M3_08830 055aece7a3c5ba9c1fa6b1e473c4dc49 206 SUPERFAMILY SSF89392 27 192 3.45E-20 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX K04M3_08830 055aece7a3c5ba9c1fa6b1e473c4dc49 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 6.7E-12 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like K04M3_08830 055aece7a3c5ba9c1fa6b1e473c4dc49 206 Gene3D G3DSA:2.50.20.10 26 206 1.9E-25 T 12-10-2018 K04M3_04710 64f41a184f70cfc28fe5c77fe4fa81cf 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 8.2E-26 T 12-10-2018 IPR021932 Protein of unknown function DUF3545 K04M3_42890 94e6c516701b3172b5a3e376bf310134 456 Gene3D G3DSA:3.30.70.270 305 456 3.2E-37 T 12-10-2018 K04M3_42890 94e6c516701b3172b5a3e376bf310134 456 SMART SM00267 295 454 1.6E-33 T 12-10-2018 IPR000160 GGDEF domain K04M3_42890 94e6c516701b3172b5a3e376bf310134 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 453 2.0E-34 T 12-10-2018 IPR000160 GGDEF domain K04M3_42890 94e6c516701b3172b5a3e376bf310134 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 307 453 1.1E-33 T 12-10-2018 IPR000160 GGDEF domain K04M3_42890 94e6c516701b3172b5a3e376bf310134 456 SUPERFAMILY SSF55073 310 452 1.8E-32 T 12-10-2018 IPR029787 Nucleotide cyclase K04M3_12720 eb004aaeab7f37901b0effada2f7299d 182 Pfam PF06254 Putative bacterial toxin ydaT 58 101 3.3E-5 T 12-10-2018 IPR009364 Putative bacterial toxin ydaT K04M3_12720 eb004aaeab7f37901b0effada2f7299d 182 Gene3D G3DSA:1.10.3600.10 5 104 2.1E-11 T 12-10-2018 IPR037042 Putative bacterial toxin ydaT superfamily K04M3_42790 451ed1333e062083a38c8e4257ffee64 104 SUPERFAMILY SSF103481 6 102 9.29E-18 T 12-10-2018 K04M3_42790 451ed1333e062083a38c8e4257ffee64 104 Gene3D G3DSA:1.10.3730.20 1 104 3.8E-30 T 12-10-2018 K04M3_42790 451ed1333e062083a38c8e4257ffee64 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.0E-25 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 K04M3_26740 4c1e5be21747879d1f2cd2e4743c31c1 93 Gene3D G3DSA:1.20.5.400 21 63 4.9E-13 T 12-10-2018 K04M3_26740 4c1e5be21747879d1f2cd2e4743c31c1 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.254 T 12-10-2018 IPR023081 Cell division protein FtsB K04M3_26740 4c1e5be21747879d1f2cd2e4743c31c1 93 Pfam PF04977 Septum formation initiator 11 89 7.1E-29 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC K04M3_30040 b9cdd74fc4b6746fceedbca6d6ff412a 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 9.3E-35 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 8.7E-52 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 8.7E-52 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 8.7E-52 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 8.7E-52 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.8E-67 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.162 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site K04M3_00900 2f2392ed1fe5164ac4fe1c6d23814ee9 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 3.8E-77 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 K04M3_25540 bd13c1b265f54af63c5d2c71decab42a 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_25540 bd13c1b265f54af63c5d2c71decab42a 337 Pfam PF01136 Peptidase family U32 75 336 3.6E-69 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 K04M3_26630 d75f27a1ef84c5712e6344850964d752 155 Pfam PF02631 RecX family 34 150 4.8E-30 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 K04M3_26630 d75f27a1ef84c5712e6344850964d752 155 Gene3D G3DSA:1.10.10.10 104 151 4.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26630 d75f27a1ef84c5712e6344850964d752 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.892 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 K04M3_26630 d75f27a1ef84c5712e6344850964d752 155 Gene3D G3DSA:1.10.10.10 11 50 1.3E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_26630 d75f27a1ef84c5712e6344850964d752 155 Gene3D G3DSA:1.10.10.10 58 101 6.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_00710 6fad8b49cad5149cdd68fe5863ff812f 183 Pfam PF04972 BON domain 33 99 2.4E-17 T 12-10-2018 IPR007055 BON domain K04M3_00710 6fad8b49cad5149cdd68fe5863ff812f 183 Pfam PF04972 BON domain 115 182 4.2E-15 T 12-10-2018 IPR007055 BON domain K04M3_00710 6fad8b49cad5149cdd68fe5863ff812f 183 SMART SM00749 37 100 36.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria K04M3_00710 6fad8b49cad5149cdd68fe5863ff812f 183 SMART SM00749 120 183 5.7E-5 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria K04M3_21850 3a9e18a6cfcd5c25026fd2c93d0e91b5 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.58 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 K04M3_21850 3a9e18a6cfcd5c25026fd2c93d0e91b5 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.3E-99 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 K04M3_06400 295c4a36d6806ed56aec80aa5a02ecf4 519 Pfam PF03806 AbgT putative transporter family 19 517 1.5E-210 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 K04M3_38040 6ebcf88e03c7d4ce28f40a84c9c28302 222 Pfam PF08856 Protein of unknown function (DUF1826) 23 220 4.7E-62 T 12-10-2018 IPR014955 Protein of unknown function DUF1826 K04M3_00070 1b36f372eff42f399c3db4b3b5d5a780 145 Gene3D G3DSA:2.60.40.790 34 137 1.7E-22 T 12-10-2018 IPR008978 HSP20-like chaperone K04M3_00070 1b36f372eff42f399c3db4b3b5d5a780 145 SUPERFAMILY SSF49764 6 137 2.2E-23 T 12-10-2018 IPR008978 HSP20-like chaperone K04M3_00070 1b36f372eff42f399c3db4b3b5d5a780 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 2.6E-19 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain K04M3_31110 ce509231e992a5b5fb4524d8743a15d8 337 Pfam PF01757 Acyltransferase family 7 327 1.0E-28 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 K04M3_22680 ff81c900f35d672d96e34823bcfb1b8a 246 SUPERFAMILY SSF75708 26 245 2.22E-65 T 12-10-2018 K04M3_22680 ff81c900f35d672d96e34823bcfb1b8a 246 PIRSF PIRSF002884 13 246 5.0E-90 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 K04M3_22680 ff81c900f35d672d96e34823bcfb1b8a 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 4.7E-76 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 K04M3_22680 ff81c900f35d672d96e34823bcfb1b8a 246 Gene3D G3DSA:1.10.287.500 55 189 3.6E-45 T 12-10-2018 K04M3_01950 9a3e704eaa1dfb484685d063c26ba042 385 Pfam PF04932 O-Antigen ligase 168 317 1.6E-16 T 12-10-2018 IPR007016 O-antigen ligase-related K04M3_49210 0e2ed5a1cfe6b183dc6b6ac70548ccd6 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 188 4.4E-32 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT K04M3_11090 1d3e06fd1394574c6ca87a66b619c288 533 Pfam PF03553 Na+/H+ antiporter family 165 497 5.9E-108 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_24370 5a6176013b727846bec4061fd806a5bf 593 Pfam PF03235 Protein of unknown function DUF262 8 257 3.3E-29 T 12-10-2018 IPR004919 Domain of unknown function DUF262 K04M3_39050 59775e58fecc5fee18cee299a25e450c 371 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 142 2.8E-32 T 12-10-2018 IPR010657 ImpA, N-terminal K04M3_39050 59775e58fecc5fee18cee299a25e450c 371 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 10 364 6.9E-80 T 12-10-2018 IPR017740 Type VI secretion system-associated, ImpA K04M3_47910 4b560ee6beb2ca823466a45a44803cd3 130 SUPERFAMILY SSF54403 50 115 1.36E-7 T 12-10-2018 K04M3_16800 39bdde870e8f7f049ec33e1dbbc7800e 364 SUPERFAMILY SSF103473 84 363 6.54E-6 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_16800 39bdde870e8f7f049ec33e1dbbc7800e 364 Pfam PF03773 Predicted permease 10 360 1.2E-61 T 12-10-2018 IPR005524 Predicted permease DUF318 K04M3_24070 6a09d4ea65a72b4f029d5d902ed542da 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 2.6E-30 T 12-10-2018 IPR021732 Protein of unknown function DUF3301 K04M3_00510 9ee5c3026ee376dcf72f42928aafd998 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 6.8E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 K04M3_00510 9ee5c3026ee376dcf72f42928aafd998 109 Gene3D G3DSA:1.10.3730.20 7 109 2.9E-21 T 12-10-2018 K04M3_00510 9ee5c3026ee376dcf72f42928aafd998 109 SUPERFAMILY SSF103481 12 107 5.89E-15 T 12-10-2018 K04M3_52360 95bf30bb5dd2896b18a51b771f8c5dcd 404 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 137 259 3.9E-7 T 12-10-2018 IPR022073 Putative outer membrane core complex of type IVb secretion K04M3_12240 81e7751d581737dc6b042cb44408c35d 231 PIRSF PIRSF028111 1 230 2.2E-84 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 K04M3_12240 81e7751d581737dc6b042cb44408c35d 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 K04M3_46440 db7ce4ddf089e810b45dffad45570b13 262 SUPERFAMILY SSF161098 11 258 5.05E-44 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_46440 db7ce4ddf089e810b45dffad45570b13 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 261 3.1E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_46440 db7ce4ddf089e810b45dffad45570b13 262 Gene3D G3DSA:1.10.3720.10 2 255 4.1E-39 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_24960 65e898101ebf6a9406f24a69e687d035 897 Pfam PF10593 Z1 domain 417 640 6.2E-78 T 12-10-2018 IPR018310 Putative endonuclease, Z1 domain K04M3_37740 27e0d8db42c705e7f9b5b673e8aab5d4 138 Gene3D G3DSA:1.10.720.30 20 79 2.5E-26 T 12-10-2018 IPR036361 SAP domain superfamily K04M3_37740 27e0d8db42c705e7f9b5b673e8aab5d4 138 Pfam PF09905 DNA-binding protein VF530 12 74 1.1E-30 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 K04M3_29810 37aa90313f2fc76c5c186672316cb35e 318 SUPERFAMILY SSF64182 5 317 5.76E-47 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily K04M3_34170 2b3d3b8cac326875eaf34914a1899908 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 4.1E-16 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 K04M3_13940 e5103f72965668f5ac5c3f661d3fdbe2 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 9.8E-21 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 K04M3_13940 e5103f72965668f5ac5c3f661d3fdbe2 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 76 4.7E-21 T 12-10-2018 IPR019882 Conserved hypothetical protein CHP03643 K04M3_48780 3e7858d7eb4c522a1360ae67bec4cff3 109 Gene3D G3DSA:2.40.10.320 2 67 3.1E-6 T 12-10-2018 K04M3_48780 3e7858d7eb4c522a1360ae67bec4cff3 109 Pfam PF13642 protein structure with unknown function 8 107 1.4E-32 T 12-10-2018 IPR025284 Protein of unknown function DUF4144 K04M3_17840 c149b79399606b0d8ab71688ba21b90e 451 Pfam PF04632 Fusaric acid resistance protein family 9 253 1.2E-33 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 K04M3_43080 4bce0abf8a35f01c96bc16e6e9597630 433 Pfam PF13584 Oxygen tolerance 65 294 6.6E-26 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD K04M3_18650 909521c028128c04d8335383e1754ebb 226 Pfam PF03050 Transposase IS66 family 38 226 2.8E-57 T 12-10-2018 IPR004291 Transposase, IS66 K04M3_03710 2b53221864e3c20cfcdaa6ba403d204d 239 PIRSF PIRSF029033 1 239 5.4E-108 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein K04M3_03710 2b53221864e3c20cfcdaa6ba403d204d 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 4.8E-15 T 12-10-2018 IPR007497 Protein of unknown function DUF541 K04M3_29920 5d96ab0c96d38716e70955947d2a39db 165 Pfam PF02308 MgtC family 19 141 4.3E-28 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 K04M3_29920 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 K04M3_29920 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 K04M3_29920 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 K04M3_29920 5d96ab0c96d38716e70955947d2a39db 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 K04M3_39930 80001414535d948e59ab296b07ae33c0 249 Pfam PF01764 Lipase (class 3) 47 191 7.4E-27 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 K04M3_39930 80001414535d948e59ab296b07ae33c0 249 Gene3D G3DSA:3.40.50.1820 13 223 5.7E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_39930 80001414535d948e59ab296b07ae33c0 249 SUPERFAMILY SSF53474 2 234 1.75E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_19720 d370b3e59b55eea73198a9492a34c899 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 1.9E-60 T 12-10-2018 IPR021367 Protein of unknown function DUF2982 K04M3_07620 5e57f70f8f81aaeb1b4accb01da38cdf 143 PIRSF PIRSF028687 1 143 3.1E-58 T 12-10-2018 IPR007293 Flagellar protein FlgP K04M3_07620 5e57f70f8f81aaeb1b4accb01da38cdf 143 Pfam PF02169 LPP20 lipoprotein 20 118 1.1E-8 T 12-10-2018 IPR024952 Lipoprotein LPP20-like K04M3_28880 50ee1bde278c3ab775971f1d0aad097f 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 7.3E-11 T 12-10-2018 IPR007813 Fimbrial assembly PilN K04M3_08160 ab488a21fe2c1606e8dd30e9deb5db4e 292 SUPERFAMILY SSF46894 10 107 3.68E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 K04M3_08160 ab488a21fe2c1606e8dd30e9deb5db4e 292 Gene3D G3DSA:1.10.10.10 5 107 9.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily K04M3_08160 ab488a21fe2c1606e8dd30e9deb5db4e 292 SMART SM00862 30 107 1.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_08160 ab488a21fe2c1606e8dd30e9deb5db4e 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 K04M3_19970 a51e26ac3d83d9d397e7cfd6758a7ea9 305 Pfam PF13084 Domain of unknown function (DUF3943) 142 251 9.4E-38 T 12-10-2018 IPR025079 Domain of unknown function DUF3943 K04M3_38020 f55fd48c8b0c0d9e2df51c6e056a65dd 268 Pfam PF01925 Sulfite exporter TauE/SafE 11 262 2.9E-43 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_28750 c05ff01e42153b83e11c3551d270fa10 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 5.3E-53 T 12-10-2018 IPR007433 Protein of unknown function DUF481 K04M3_28750 c05ff01e42153b83e11c3551d270fa10 254 SUPERFAMILY SSF56935 32 208 8.96E-5 T 12-10-2018 K04M3_00680 5b5e0fb70c59f9c91ab05b8ee7b6b41a 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 2.5E-51 T 12-10-2018 IPR019598 Universal stress protein B K04M3_00680 5b5e0fb70c59f9c91ab05b8ee7b6b41a 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.155 T 12-10-2018 IPR019598 Universal stress protein B K04M3_47500 612e7f23b7c02b6382d3976c98e3776e 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 6.6E-145 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 K04M3_24450 1f848fdfea7fd2e8c1611644a46c1110 155 Pfam PF14464 Prokaryotic homologs of the JAB domain 36 135 2.3E-15 T 12-10-2018 IPR028090 JAB domain, prokaryotic K04M3_24450 1f848fdfea7fd2e8c1611644a46c1110 155 SUPERFAMILY SSF102712 17 120 4.32E-9 T 12-10-2018 K04M3_24450 1f848fdfea7fd2e8c1611644a46c1110 155 Gene3D G3DSA:3.40.140.10 16 150 1.6E-10 T 12-10-2018 K04M3_24450 1f848fdfea7fd2e8c1611644a46c1110 155 TIGRFAM TIGR02256 ICE_VC0181: conserved hypothetical protein 22 148 1.8E-44 T 12-10-2018 IPR011952 Conserved hypothetical protein CHP02256 K04M3_33070 400744b8cfd2f064c5c45f7a1ce13268 836 Pfam PF02687 FtsX-like permease family 735 825 6.9E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 K04M3_28500 3a9b2c348bd5f6f4b12e93fecbd4c3f7 443 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 3.4E-55 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_17140 ba744a6962d427a113f93f5f218d9c26 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 8.1E-38 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_35790 54a97ddb1de98f66b891ccb8b1e68f81 131 Pfam PF04892 VanZ like family 40 123 3.2E-9 T 12-10-2018 IPR006976 VanZ-like K04M3_31080 48869bfa1663f171141a44c8d1c31245 206 Pfam PF07947 YhhN family 26 204 2.9E-32 T 12-10-2018 IPR012506 YhhN-like GO:0016021 K04M3_12140 72615579d8031632eecfe445f341ae8a 244 Pfam PF02698 DUF218 domain 61 200 2.3E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 K04M3_11750 eda4274a75088d764f7a5717cc781bed 141 Gene3D G3DSA:3.10.450.40 74 129 5.2E-6 T 12-10-2018 K04M3_36440 671f0a487361014ccebd5e6fa3bb0e6f 126 Gene3D G3DSA:1.20.1290.10 2 125 9.6E-41 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_36440 671f0a487361014ccebd5e6fa3bb0e6f 126 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 2.3E-23 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 K04M3_36440 671f0a487361014ccebd5e6fa3bb0e6f 126 SUPERFAMILY SSF69118 4 122 1.31E-36 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 K04M3_37030 ca0758823eeccb36ee97fa7dbfce805e 454 Pfam PF07670 Nucleoside recognition 140 234 9.8E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_27080 7beb56785111d5af35b2eff1a8b70d56 194 Pfam PF01810 LysE type translocator 2 187 2.7E-42 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_44850 a260fbe88a2b52c52c1af678e5574086 701 TIGRFAM TIGR04456 LruC_dom: LruC domain 440 691 8.9E-86 T 12-10-2018 IPR031025 LruC domain K04M3_44850 a260fbe88a2b52c52c1af678e5574086 701 SUPERFAMILY SSF101898 43 230 2.62E-14 T 12-10-2018 K04M3_44850 a260fbe88a2b52c52c1af678e5574086 701 Pfam PF16130 Domain of unknown function (DUF4842) 473 690 1.5E-59 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 K04M3_04910 9a962b43068d4ef1df64f16d56296b19 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.4E-50 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 K04M3_43130 ca24a643976f679c0b18869e2e849788 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.1E-60 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 K04M3_43130 ca24a643976f679c0b18869e2e849788 327 Gene3D G3DSA:3.40.50.300 1 208 6.2E-51 T 12-10-2018 K04M3_43130 ca24a643976f679c0b18869e2e849788 327 Gene3D G3DSA:1.10.8.300 209 324 4.8E-35 T 12-10-2018 K04M3_43130 ca24a643976f679c0b18869e2e849788 327 SUPERFAMILY SSF52540 5 302 2.41E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase K04M3_43130 ca24a643976f679c0b18869e2e849788 327 PIRSF PIRSF002849 1 327 9.1E-127 T 12-10-2018 K04M3_41190 82e0505f6603345a013cc9b107167c41 97 Pfam PF11782 Protein of unknown function (DUF3319) 1 56 6.3E-26 T 12-10-2018 IPR021753 Protein of unknown function DUF3319 K04M3_43120 7311229526cd7e2a2d6c5414d95b3ed0 320 Pfam PF01882 Protein of unknown function DUF58 58 143 4.9E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 K04M3_02370 a33f5e759b1b130b97cd816c6bd61370 143 Pfam PF10980 Protein of unknown function (DUF2787) 14 138 2.1E-35 T 12-10-2018 IPR021248 Protein of unknown function DUF2787 K04M3_02370 a33f5e759b1b130b97cd816c6bd61370 143 Gene3D G3DSA:3.10.450.430 4 141 2.2E-26 T 12-10-2018 K04M3_40050 a2101ea6900d32676f50c9de0b341dcf 282 Gene3D G3DSA:1.20.1080.10 2 251 2.6E-62 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 K04M3_40050 a2101ea6900d32676f50c9de0b341dcf 282 Pfam PF01226 Formate/nitrite transporter 9 258 1.5E-57 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 K04M3_05980 3aa7fe4d4e261f16cbd6a1f41cd91135 78 TIGRFAM TIGR04359 TrbK_RP4: entry exclusion lipoprotein TrbK 9 77 6.8E-11 T 12-10-2018 IPR027584 Entry exclusion lipoprotein TrbK K04M3_00210 34b069b623c63771ba5ffdfc220bf66c 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 3.8E-116 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 K04M3_00210 34b069b623c63771ba5ffdfc220bf66c 485 PIRSF PIRSF006247 1 485 9.4E-176 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 K04M3_00210 34b069b623c63771ba5ffdfc220bf66c 485 Pfam PF02386 Cation transport protein 39 477 1.9E-87 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 K04M3_06250 d91dffd8d7831318d2d2f6333ae53df0 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.066 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE K04M3_06250 d91dffd8d7831318d2d2f6333ae53df0 119 Gene3D G3DSA:3.30.1450.10 34 117 3.7E-25 T 12-10-2018 IPR037873 BamE-like K04M3_06250 d91dffd8d7831318d2d2f6333ae53df0 119 Pfam PF04355 SmpA / OmlA family 35 103 2.3E-25 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 K04M3_19480 3e5a3ae88368cd07d73b3c857bc48e59 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 381 5.9E-18 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 K04M3_25330 a51904bb2e6c91e8882ed3f7bcd02d80 69 Pfam PF06568 Domain of unknown function (DUF1127) 24 55 2.5E-8 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 K04M3_22250 d045677ab5950dfe6b4cdcda6c33da3a 163 Pfam PF02674 Colicin V production protein 4 142 5.5E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 K04M3_46680 2e203a9342c006f68f72f4b7a1e182f6 69 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 4.0E-18 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM K04M3_33410 9347c5f8be882e8eb514a52f3b72942c 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 152 1.4E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ K04M3_46780 17b37208236b735f1a4c4e7069cb3475 293 SUPERFAMILY SSF103481 42 142 5.75E-14 T 12-10-2018 K04M3_46780 17b37208236b735f1a4c4e7069cb3475 293 Pfam PF00892 EamA-like transporter family 9 138 1.8E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_46780 17b37208236b735f1a4c4e7069cb3475 293 SUPERFAMILY SSF103481 182 281 4.18E-10 T 12-10-2018 K04M3_25020 fb2b98bbd149a496c15de9284f218ad3 68 SUPERFAMILY SSF46689 2 62 6.99E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 K04M3_27730 8e941fb8dc85b4f72e36dcd127128ffe 159 Pfam PF06271 RDD family 9 149 4.9E-22 T 12-10-2018 IPR010432 RDD K04M3_11360 e07ba7a2925d4d742dec4e7916b191ba 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 402 4.1E-165 T 12-10-2018 IPR021552 Putative, 10TM heavy-metal exporter K04M3_09720 363fc44c1353708e69ff906c24003a82 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 1.6E-45 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 K04M3_25110 0b9e0e568c309e724fb1a3f1ca763339 327 Pfam PF14057 GGGtGRT protein 7 324 1.0E-173 T 12-10-2018 IPR025964 GGGtGRT protein K04M3_15370 16a3d444c382060a9ef312217481e4cd 526 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site K04M3_15370 16a3d444c382060a9ef312217481e4cd 526 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 3.4E-134 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_15370 16a3d444c382060a9ef312217481e4cd 526 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.6E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_18570 94c9bf562a4ab0ad7c1ea8ba95dd344f 636 Pfam PF04632 Fusaric acid resistance protein family 308 526 4.3E-28 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 K04M3_25090 2dbc8b3892c3a3698f5d4009338c648d 99 Pfam PF07130 YebG protein 1 72 1.5E-31 T 12-10-2018 IPR009813 Uncharacterised protein family YebG K04M3_25090 2dbc8b3892c3a3698f5d4009338c648d 99 Gene3D G3DSA:1.10.10.710 21 97 3.9E-7 T 12-10-2018 IPR038627 YebG-like superfamily K04M3_44800 eee62764eef402325f29282f1a874158 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 53.748 T 12-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 K04M3_44800 eee62764eef402325f29282f1a874158 467 SUPERFAMILY SSF81340 25 451 6.15E-114 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 Gene3D G3DSA:1.10.3080.10 29 467 4.7E-143 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 Pfam PF00654 Voltage gated chloride channel 87 435 5.0E-95 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 181 200 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 403 422 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 350 370 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 385 401 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 K04M3_44800 eee62764eef402325f29282f1a874158 467 PRINTS PR00762 Chloride channel signature 100 117 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 K04M3_06260 d959a6cdc8b7856a0b13e0f01b0dbca0 160 SUPERFAMILY SSF55729 1 150 1.3E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_06260 d959a6cdc8b7856a0b13e0f01b0dbca0 160 Gene3D G3DSA:3.40.630.30 1 160 5.8E-39 T 12-10-2018 K04M3_06260 d959a6cdc8b7856a0b13e0f01b0dbca0 160 Pfam PF00583 Acetyltransferase (GNAT) family 33 136 1.3E-13 T 12-10-2018 IPR000182 GNAT domain K04M3_17190 225108ed3f6c9f08d0546f8a293de07b 607 Pfam PF04792 V antigen (LcrV) protein 408 607 4.6E-29 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 K04M3_17190 225108ed3f6c9f08d0546f8a293de07b 607 PRINTS PR01592 Low calcium response V antigen signature 454 476 9.4E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 K04M3_17190 225108ed3f6c9f08d0546f8a293de07b 607 PRINTS PR01592 Low calcium response V antigen signature 582 604 9.4E-12 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 K04M3_17190 225108ed3f6c9f08d0546f8a293de07b 607 SUPERFAMILY SSF103388 351 606 8.37E-84 T 12-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 K04M3_35050 5286f72371285867cb040434a1048572 166 Gene3D G3DSA:3.40.630.30 1 163 1.1E-40 T 12-10-2018 K04M3_35050 5286f72371285867cb040434a1048572 166 SUPERFAMILY SSF55729 3 161 5.06E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase K04M3_35050 5286f72371285867cb040434a1048572 166 Pfam PF00583 Acetyltransferase (GNAT) family 36 136 1.3E-16 T 12-10-2018 IPR000182 GNAT domain K04M3_09950 25b35517ba55de3d15da2e812922e5ca 181 Gene3D G3DSA:1.20.1270.340 1 98 5.5E-16 T 12-10-2018 IPR038338 PriB/PriC superfamily K04M3_09950 25b35517ba55de3d15da2e812922e5ca 181 Pfam PF07445 Primosomal replication protein priC 4 178 3.1E-50 T 12-10-2018 IPR010890 Primosomal replication PriB/PriC K04M3_37280 d05ebb712e3281f369bca218c11bf739 280 Pfam PF02104 SURF1 family 46 253 4.4E-20 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 K04M3_09940 134b24bb1213426c9f8ad5b4d9da916f 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 3.7E-24 T 12-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related K04M3_43440 1b1b6d73a4cfbb5130eaacb55b485063 292 SUPERFAMILY SSF53822 6 292 1.21E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I K04M3_43440 1b1b6d73a4cfbb5130eaacb55b485063 292 Gene3D G3DSA:3.40.50.2300 125 259 3.1E-98 T 12-10-2018 K04M3_43440 1b1b6d73a4cfbb5130eaacb55b485063 292 Gene3D G3DSA:3.40.50.2300 29 278 3.1E-98 T 12-10-2018 K04M3_43440 1b1b6d73a4cfbb5130eaacb55b485063 292 Pfam PF13407 Periplasmic binding protein domain 28 278 2.2E-60 T 12-10-2018 IPR025997 Periplasmic binding protein K04M3_39800 80a662da68901e4751f9bcd9ba915ce9 254 Pfam PF07275 Antirestriction protein (ArdA) 111 246 1.2E-14 T 12-10-2018 IPR009899 Antirestriction K04M3_39800 80a662da68901e4751f9bcd9ba915ce9 254 Gene3D G3DSA:1.10.10.1190 203 251 2.9E-7 T 12-10-2018 K04M3_40080 1b5f814760c2980c576b6e38785e6b5b 162 Pfam PF01936 NYN domain 8 156 2.7E-37 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type K04M3_40080 1b5f814760c2980c576b6e38785e6b5b 162 Gene3D G3DSA:3.40.50.1010 1 162 2.9E-60 T 12-10-2018 K04M3_18590 10a5f38e43a0b88f2de40a3ca42a5ba9 67 Pfam PF17090 Uncharacterised protein family 2 52 7.1E-10 T 12-10-2018 IPR031381 Uncharacterised protein YtcA K04M3_13140 6096e96c65ef7e66f055f9aa79694671 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 5.9E-7 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 K04M3_35290 dd082d98fe837427f656abfe2615fab7 191 Pfam PF07603 Protein of unknown function (DUF1566) 42 175 7.3E-21 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 K04M3_24260 0106d376fe22ff9cc53e66a2b3a9b028 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 4.1E-72 T 12-10-2018 IPR021307 Protein of unknown function DUF2884 K04M3_14660 c9b32ebce142be0bba26246208b92023 552 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.6E-133 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_14660 c9b32ebce142be0bba26246208b92023 552 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 2.2E-168 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_04120 e0f102ddfd385c874e62856dd336daa8 245 Pfam PF02167 Cytochrome C1 family 33 244 2.8E-16 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 K04M3_04120 e0f102ddfd385c874e62856dd336daa8 245 SUPERFAMILY SSF46626 17 208 2.58E-49 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_04120 e0f102ddfd385c874e62856dd336daa8 245 Gene3D G3DSA:1.10.760.10 26 210 3.2E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 K04M3_09920 d920edeb44187677e4abdc58429611ba 907 SMART SM01276 453 776 5.9E-48 T 12-10-2018 IPR031161 Peptidase family M60 domain K04M3_09920 d920edeb44187677e4abdc58429611ba 907 Pfam PF17291 N-terminal domain of M60-like peptidases 446 538 1.9E-5 T 12-10-2018 IPR035423 M60-like domain, N-terminal K04M3_18780 3f3344c13d73b2f4b9f101cff9eb038a 441 Pfam PF03432 Relaxase/Mobilisation nuclease domain 75 249 5.7E-17 T 12-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 K04M3_39080 3a8f0faebf210a45ef923c68cb6adac0 499 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 56 493 8.2E-135 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath K04M3_39080 3a8f0faebf210a45ef923c68cb6adac0 499 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 63 493 6.3E-161 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath K04M3_03900 46f78949d3bd12b9f927868899fc36bf 419 Pfam PF01384 Phosphate transporter family 26 407 9.9E-113 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 K04M3_06440 ae033536a15221752be12dcad3d48319 102 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 4.3E-35 T 12-10-2018 IPR022069 Protein of unknown function DUF3622 K04M3_30260 6cb9091868711133a61946fe384daed2 385 SUPERFAMILY SSF103473 5 371 1.57E-51 T 12-10-2018 IPR036259 MFS transporter superfamily K04M3_30260 6cb9091868711133a61946fe384daed2 385 Gene3D G3DSA:1.20.1250.20 2 373 2.3E-47 T 12-10-2018 K04M3_30260 6cb9091868711133a61946fe384daed2 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 1.3E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_30260 6cb9091868711133a61946fe384daed2 385 PRINTS PR01035 Tetracycline resistance protein signature 293 313 1.3E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_30260 6cb9091868711133a61946fe384daed2 385 PRINTS PR01035 Tetracycline resistance protein signature 39 58 1.3E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_30260 6cb9091868711133a61946fe384daed2 385 PRINTS PR01035 Tetracycline resistance protein signature 97 118 1.3E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_30260 6cb9091868711133a61946fe384daed2 385 PRINTS PR01035 Tetracycline resistance protein signature 237 257 1.3E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 K04M3_30260 6cb9091868711133a61946fe384daed2 385 Pfam PF07690 Major Facilitator Superfamily 7 327 2.6E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 K04M3_01060 62205ea8f2bf3d81a8c7d875734d8a63 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 71 1.3E-12 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 K04M3_44180 e09fe3c4bccf3bf2ca423653d366da80 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 3.7E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_44180 e09fe3c4bccf3bf2ca423653d366da80 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 3.7E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_44180 e09fe3c4bccf3bf2ca423653d366da80 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 3.7E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_44180 e09fe3c4bccf3bf2ca423653d366da80 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 3.7E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_44180 e09fe3c4bccf3bf2ca423653d366da80 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.7E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_44180 e09fe3c4bccf3bf2ca423653d366da80 498 Pfam PF00361 Proton-conducting membrane transporter 129 413 4.0E-58 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 K04M3_25840 3da00431ea37e68acf3d5f497159a598 347 Pfam PF01594 AI-2E family transporter 3 333 8.2E-52 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like K04M3_13600 1d3b91a28be376e1f5388c1cf8556ef9 134 Pfam PF08818 Domain of unknown function (DU1801) 20 120 6.9E-9 T 12-10-2018 IPR014922 Domain of unknown function DUF1801 K04M3_13600 1d3b91a28be376e1f5388c1cf8556ef9 134 SUPERFAMILY SSF159888 7 126 4.19E-10 T 12-10-2018 K04M3_51390 9005a048a83b59d9077633a6fc53fd97 290 Pfam PF02631 RecX family 53 171 8.8E-10 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 K04M3_51390 9005a048a83b59d9077633a6fc53fd97 290 Pfam PF02631 RecX family 198 284 2.4E-5 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 K04M3_02260 42c5e566a27e087b0b7f78a9a623c3a2 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 3.3E-20 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 K04M3_23270 eed630e1cf7e04e96ffbdd73a9a5f1da 172 Pfam PF02794 RTX toxin acyltransferase family 35 137 9.5E-9 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 K04M3_42540 da3b0cd20f7ce9b0b6ef1a4c5ddc936d 167 Pfam PF11158 Protein of unknown function (DUF2938) 10 157 6.1E-58 T 12-10-2018 IPR021329 Protein of unknown function DUF2938 K04M3_18140 edc9bb733edd6824d098e398462b6713 162 Pfam PF04463 Protein of unknown function (DUF523) 4 148 9.0E-40 T 12-10-2018 IPR007553 Domain of unknown function DUF523 K04M3_35950 1cb95f0e3c16d6e33f1f8ddfa00e67c0 161 Pfam PF03061 Thioesterase superfamily 22 97 8.7E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 K04M3_35950 1cb95f0e3c16d6e33f1f8ddfa00e67c0 161 Gene3D G3DSA:3.10.129.10 2 161 2.1E-44 T 12-10-2018 K04M3_35950 1cb95f0e3c16d6e33f1f8ddfa00e67c0 161 SUPERFAMILY SSF54637 6 150 3.44E-41 T 12-10-2018 IPR029069 HotDog domain superfamily K04M3_40530 55d949c8f3e5c46c8f4e119e771733a6 122 Pfam PF10719 Late competence development protein ComFB 8 85 9.6E-16 T 12-10-2018 IPR019657 Late competence development protein ComFB K04M3_13320 e333559fd1d879d8c8e4413210d8c68d 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 8.3E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_13320 e333559fd1d879d8c8e4413210d8c68d 426 Gene3D G3DSA:1.10.3720.10 172 420 3.1E-47 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_13320 e333559fd1d879d8c8e4413210d8c68d 426 SUPERFAMILY SSF161098 37 416 9.0E-47 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_22360 639344a2f965539e7d660d181ad34e09 87 Pfam PF08891 YfcL protein 4 84 2.1E-33 T 12-10-2018 IPR014987 Uncharacterised protein family YfcL K04M3_00470 50aa2493466b7fd3d302a1f942a90920 339 Pfam PF05036 Sporulation related domain 74 142 1.8E-6 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 K04M3_33400 3e3e1cc55f4ed19d6d8064616f94eda5 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 6.5E-114 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit K04M3_33400 3e3e1cc55f4ed19d6d8064616f94eda5 426 PIRSF PIRSF006066 1 426 1.5E-148 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_33400 3e3e1cc55f4ed19d6d8064616f94eda5 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.8E-127 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 K04M3_22490 fbcb477cc88e090cfc6c35e5bb398a26 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 240 7.8E-86 T 12-10-2018 IPR021806 Protein of unknown function DUF3379 K04M3_45650 e657f4a9088aa2671b041a2f826b8653 147 Pfam PF11911 Protein of unknown function (DUF3429) 5 145 7.8E-27 T 12-10-2018 IPR021836 Protein of unknown function DUF3429 K04M3_01990 c88e91d02e21e295e7facc18dd3d4637 226 SUPERFAMILY SSF159270 27 224 1.83E-54 T 12-10-2018 IPR023373 YmcC-like superfamily K04M3_01990 c88e91d02e21e295e7facc18dd3d4637 226 Gene3D G3DSA:2.40.360.10 25 225 5.4E-56 T 12-10-2018 IPR023373 YmcC-like superfamily K04M3_01990 c88e91d02e21e295e7facc18dd3d4637 226 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 23 220 2.4E-54 T 12-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB K04M3_12250 1522174aa0a023669ec27c36ccd499b7 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 2.6E-117 T 12-10-2018 IPR024513 Protein of unknown function DUF3334 K04M3_12250 1522174aa0a023669ec27c36ccd499b7 226 SUPERFAMILY SSF103039 10 173 3.66E-24 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_12250 1522174aa0a023669ec27c36ccd499b7 226 Gene3D G3DSA:3.40.1550.10 8 173 2.6E-20 T 12-10-2018 IPR028976 CheC-like superfamily K04M3_47270 b82ed13ae4269cc0757d6acc37290de2 280 Pfam PF02698 DUF218 domain 6 132 3.5E-15 T 12-10-2018 IPR003848 Domain of unknown function DUF218 K04M3_10000 0b914695afb5d5cc08e0b02a0228a777 225 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 221 2.8E-43 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 K04M3_10000 0b914695afb5d5cc08e0b02a0228a777 225 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 224 23.451 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 K04M3_43860 549f644e42c637862a9c5c75ab586d55 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 1.1E-32 T 12-10-2018 IPR014991 Protein of unknown function DUF1840 K04M3_12030 731c8f53e1252ba8321e13fab1042160 422 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.2E-38 T 12-10-2018 IPR010352 Protein of unknown function DUF945 K04M3_18640 2a7a8ac2072fe555021ddc246cdd3fd3 346 SUPERFAMILY SSF56235 24 326 3.09E-101 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal K04M3_18640 2a7a8ac2072fe555021ddc246cdd3fd3 346 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 24 312 1.6E-53 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal K04M3_18640 2a7a8ac2072fe555021ddc246cdd3fd3 346 Gene3D G3DSA:3.60.60.10 21 340 1.1E-128 T 12-10-2018 K04M3_52050 5fc08833dfab9a26eb04e6e7d2dce074 146 Gene3D G3DSA:3.30.40.60 2 102 2.3E-11 T 12-10-2018 K04M3_10720 9e6fc4cc53104ea4955ed49e895b2c4b 442 Gene3D G3DSA:3.60.10.10 170 441 1.1E-63 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_10720 9e6fc4cc53104ea4955ed49e895b2c4b 442 SUPERFAMILY SSF56219 175 440 1.83E-61 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily K04M3_10720 9e6fc4cc53104ea4955ed49e895b2c4b 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 1.2E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase K04M3_41940 f693798cba216c69532d8486b9ce8ecc 160 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 5.6E-37 T 12-10-2018 IPR009476 Protein of unknown function DUF1097 K04M3_03040 75bff307f44653c9504397b38d7f9199 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 7.7E-44 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 K04M3_03040 75bff307f44653c9504397b38d7f9199 164 Gene3D G3DSA:2.40.50.870 23 164 4.0E-46 T 12-10-2018 K04M3_21210 8bebff2baaa04072455394bdf471ee16 695 Pfam PF05170 AsmA family 1 585 1.6E-118 T 12-10-2018 IPR007844 AsmA K04M3_01140 c7fc1af38fe9c44c93617cf51ee02f4e 705 Pfam PF05170 AsmA family 1 568 4.0E-134 T 12-10-2018 IPR007844 AsmA K04M3_30550 6d35316e65a8d95859d7353871fd62c2 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 K04M3_30550 6d35316e65a8d95859d7353871fd62c2 164 Gene3D G3DSA:3.30.70.1730 1 124 9.8E-35 T 12-10-2018 K04M3_30550 6d35316e65a8d95859d7353871fd62c2 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.085 T 12-10-2018 IPR022973 Ribosomal protein L10 K04M3_30550 6d35316e65a8d95859d7353871fd62c2 164 Pfam PF00466 Ribosomal protein L10 5 101 7.2E-27 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 K04M3_30550 6d35316e65a8d95859d7353871fd62c2 164 SUPERFAMILY SSF160369 4 158 1.44E-44 T 12-10-2018 K04M3_19320 7f1ca1a76e806197ea2660f01178f505 178 Pfam PF06042 Nucleotidyltransferase 20 175 7.9E-56 T 12-10-2018 IPR009267 Putative nucleotidyltransferase K04M3_36370 8abe5d1d83decb715ba43aca3da8f988 358 Pfam PF03824 High-affinity nickel-transport protein 13 355 1.0E-46 T 12-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 K04M3_32090 cfc93e4fa156edbce08ea3e213dfc1e0 318 PIRSF PIRSF028696 1 318 1.2E-125 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 K04M3_32090 cfc93e4fa156edbce08ea3e213dfc1e0 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 316 1.4E-112 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 K04M3_42510 5a19e9a3e56941e1e1d6851574f8265c 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 3.2E-31 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase K04M3_44040 b4aaa395791522bee5efc582c9bb2b40 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 4.3E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 K04M3_38010 ad07a751eed4c8d5c3234e4d904eea32 339 Gene3D G3DSA:3.40.50.1820 19 243 8.5E-12 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_38010 ad07a751eed4c8d5c3234e4d904eea32 339 SUPERFAMILY SSF53474 25 286 3.37E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold K04M3_45210 ef6c5e097cad17a7ef29e4b8075aeed0 222 Pfam PF08239 Bacterial SH3 domain 72 122 1.0E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type K04M3_45210 ef6c5e097cad17a7ef29e4b8075aeed0 222 Gene3D G3DSA:2.30.30.40 54 128 9.9E-9 T 12-10-2018 K04M3_42680 95b603acdf6dc7e84243b7f58e1386fd 91 Pfam PF03206 Nitrogen fixation protein NifW 7 72 1.5E-5 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 K04M3_39340 bc0ae7051ed0f4e5859f83ae5b19dd9f 243 Pfam PF03591 AzlC protein 32 171 1.1E-34 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease K04M3_09780 2dfef0787d1fdd2f6381e55d248681bd 519 Pfam PF04293 SpoVR like protein 26 456 6.1E-177 T 12-10-2018 IPR007390 Sporulation stage V, protein R K04M3_29320 fd2545da02bf5f1dfa7209b6090a8099 263 Gene3D G3DSA:3.10.180.50 3 239 3.5E-94 T 12-10-2018 K04M3_29320 fd2545da02bf5f1dfa7209b6090a8099 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 261 9.5E-46 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 K04M3_29320 fd2545da02bf5f1dfa7209b6090a8099 263 SMART SM01150 3 262 1.8E-115 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 K04M3_13820 df7c367b1d1aa98cebddae208c81e5a1 70 Pfam PF06127 Protein of unknown function (DUF962) 12 68 2.3E-11 T 12-10-2018 IPR009305 Protein of unknown function DUF962 K04M3_07460 0fe19e0920d970461d4e5ac4196648c1 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.5E-16 T 12-10-2018 IPR021494 Protein of unknown function DUF3149 K04M3_44370 12d87ce58bbc2855448421f12e7c98e6 437 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 2.4E-24 T 12-10-2018 IPR010657 ImpA, N-terminal K04M3_47590 819607978664605cf47d2a7a548a705e 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 447 2.4E-103 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) K04M3_47590 819607978664605cf47d2a7a548a705e 447 SUPERFAMILY SSF56935 24 447 1.05E-87 T 12-10-2018 K04M3_01510 94a392e5b8b598b857ba4347def8c5d5 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 51 168 1.2E-20 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_17580 ff48dd292a2e5f084ff18a041b3b8dfa 148 SUPERFAMILY SSF69635 4 139 5.97E-26 T 12-10-2018 K04M3_17580 ff48dd292a2e5f084ff18a041b3b8dfa 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 9.5E-14 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 K04M3_17580 ff48dd292a2e5f084ff18a041b3b8dfa 148 Gene3D G3DSA:3.30.1460.10 1 131 8.4E-29 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 4.4E-52 T 12-10-2018 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 SUPERFAMILY SSF118215 9 407 2.09E-120 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.8E-130 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 K04M3_33840 56f12a289e89120a8afda9a0ae5c64b7 434 Gene3D G3DSA:1.10.3860.10 2 413 1.0E-139 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 K04M3_34250 5f4fdee76a28aa02dc2004855eca265a 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 4.0E-25 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 K04M3_14110 197c9089836d8479dcbdeac7bf47479b 295 SUPERFAMILY SSF103481 202 270 3.53E-6 T 12-10-2018 K04M3_14110 197c9089836d8479dcbdeac7bf47479b 295 SUPERFAMILY SSF103481 42 123 2.22E-7 T 12-10-2018 K04M3_14110 197c9089836d8479dcbdeac7bf47479b 295 Pfam PF00892 EamA-like transporter family 3 124 4.9E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_14110 197c9089836d8479dcbdeac7bf47479b 295 Pfam PF00892 EamA-like transporter family 140 274 1.8E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 K04M3_44480 6761956517670822e0baaeb4669977e8 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 1.4E-68 T 12-10-2018 IPR018683 Domain of unknown function DUF2169 K04M3_44560 a2cbd126e6d4b941dfa84167900d722c 359 SUPERFAMILY SSF82171 94 292 3.18E-13 T 12-10-2018 K04M3_18660 2cd4b6289f6218a0964f09a33757c4e6 113 Pfam PF03050 Transposase IS66 family 4 67 1.8E-20 T 12-10-2018 IPR004291 Transposase, IS66 K04M3_35600 4dc61c1525f8a863b34046d1b6631adf 578 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 523 7.5E-180 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_35600 4dc61c1525f8a863b34046d1b6631adf 578 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 390 2.0E-124 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_26390 caa1bfc6d6619b2c6542210cd924b446 264 Pfam PF01578 Cytochrome C assembly protein 39 262 2.1E-46 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 K04M3_50670 4c16a81b1fca5a95a08fa89de561cd40 108 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 31 61 5.0E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal K04M3_36160 94e51de42d9043db1fc28ce84c250e8c 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 4.2E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_42450 289490c4f1419473c4ec9976353be1ea 86 Gene3D G3DSA:1.20.120.1930 1 86 2.8E-38 T 12-10-2018 K04M3_42450 289490c4f1419473c4ec9976353be1ea 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.8E-30 T 12-10-2018 IPR032036 Protein of unknown function DUF5062 K04M3_39680 f1edddbe44d47f1e1d24be4e2f40430f 57 Pfam PF10746 Phage holin T7 family, holin superfamily II 8 50 7.2E-6 T 12-10-2018 IPR019682 Bacteriophage T7, Gp17.5, holin GO:0019076|GO:0019835 K04M3_24540 05e2333487e285a9e105307f373ae7de 293 Pfam PF14022 Protein of unknown function (DUF4238) 5 231 5.3E-19 T 12-10-2018 IPR025332 Protein of unknown function DUF4238 K04M3_47930 d8487573f1f5f74444dbf6f968ea63fc 231 SUPERFAMILY SSF53955 21 222 1.74E-24 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_19080 698d536d06b906a0a1d589902ca2ad3f 185 Pfam PF13737 Transposase DDE domain 1 70 2.5E-21 T 12-10-2018 IPR025668 Transposase DDE domain K04M3_21820 82685587e772a822bd230fe1df4865cb 477 Pfam PF03553 Na+/H+ antiporter family 161 453 3.6E-66 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_21820 82685587e772a822bd230fe1df4865cb 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 5.1E-163 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 K04M3_51820 b07f9a51e0fd8a06d6f647ada7762712 293 Pfam PF11185 Protein of unknown function (DUF2971) 144 223 1.3E-8 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 K04M3_16750 9c6eb11d6d28acf52ad2919fcb1fb7c8 126 Gene3D G3DSA:1.10.357.10 1 125 3.2E-15 T 12-10-2018 K04M3_24240 e97ecaec34a2602ad4a62710615d396b 454 SUPERFAMILY SSF161070 10 453 1.01E-118 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 K04M3_24240 e97ecaec34a2602ad4a62710615d396b 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 132 3.8E-22 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_24240 e97ecaec34a2602ad4a62710615d396b 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 9.0E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_24240 e97ecaec34a2602ad4a62710615d396b 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_24240 e97ecaec34a2602ad4a62710615d396b 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_24240 e97ecaec34a2602ad4a62710615d396b 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 K04M3_39400 e5181fd47aa8e1aeaebbbd1ed017771b 107 Pfam PF14090 Helix-turn-helix domain 5 44 4.2E-8 T 12-10-2018 K04M3_09860 f0376cac865b66e3ccbc302507f96059 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 2.0E-264 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 K04M3_16050 26b8ccba1c937e638bc0498a9bd6a402 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 137 273 7.9E-17 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 K04M3_16050 26b8ccba1c937e638bc0498a9bd6a402 278 Gene3D G3DSA:1.10.530.10 134 275 9.2E-14 T 12-10-2018 K04M3_31990 161a275943e55dbd6a69efb88d905d73 481 PIRSF PIRSF006247 1 481 1.8E-166 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 K04M3_31990 161a275943e55dbd6a69efb88d905d73 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 7.5E-116 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 K04M3_31990 161a275943e55dbd6a69efb88d905d73 481 Pfam PF02386 Cation transport protein 51 475 1.2E-48 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 K04M3_40100 432d0ac91cc77e7bbc7b7dbdc54134e0 245 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 7.3E-6 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 K04M3_40100 432d0ac91cc77e7bbc7b7dbdc54134e0 245 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 6.5E-88 T 12-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family K04M3_18630 fcff5fb71d2dd850c68ce62a4851a93b 447 Pfam PF00999 Sodium/hydrogen exchanger family 2 320 2.1E-40 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 K04M3_50270 d85cd0e39a850d7cd38bd07f11b0268b 296 Pfam PF13708 Domain of unknown function (DUF4942) 100 288 2.5E-22 T 12-10-2018 IPR031339 Domain of unknown function DUF4942 K04M3_49420 2463191ed689168346e898063d50ce6e 211 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 23 210 3.0E-40 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 K04M3_06390 86fb9730642e78abcf95397b3c645d2f 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.0E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_06390 86fb9730642e78abcf95397b3c645d2f 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.8E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site K04M3_00120 ee1ebff6eaff168baa8631540d20976c 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.7E-20 T 12-10-2018 IPR001727 Gdt1 family K04M3_00120 ee1ebff6eaff168baa8631540d20976c 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 8.4E-20 T 12-10-2018 IPR001727 Gdt1 family K04M3_25890 a6f4ed0b8a70a8197c1b4a2e6665d2d3 341 Gene3D G3DSA:1.10.3720.10 94 303 4.7E-15 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25890 a6f4ed0b8a70a8197c1b4a2e6665d2d3 341 SUPERFAMILY SSF161098 96 288 1.83E-19 T 12-10-2018 IPR035906 MetI-like superfamily K04M3_25890 a6f4ed0b8a70a8197c1b4a2e6665d2d3 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 2.1E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 K04M3_28950 6a7ded9e1cc673a367acd539ed8f1e80 93 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 1.4E-35 T 12-10-2018 IPR022072 Protein of unknown function DUF3624 K04M3_21980 87c11f5e84f64fccdc19285b0cdd6199 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 1.8E-28 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 K04M3_46590 d7eed4fee0dcf4abfd4a2dc7816d1921 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 125 3.0E-12 T 12-10-2018 IPR024464 Protein of unknown function DUF2391 K04M3_32840 6a66e2e45f33d297a89cb74b2a3fe277 231 PIRSF PIRSF028137 1 231 3.7E-106 T 12-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane K04M3_08110 73a333a369bc616296758c653d985d20 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 0.003 T 12-10-2018 K04M3_28860 c10262443ce73511ab2238ef0ffb53ac 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 1.7E-42 T 12-10-2018 IPR007446 Pilus assembly protein PilP K04M3_28860 c10262443ce73511ab2238ef0ffb53ac 171 PIRSF PIRSF016481 1 171 2.1E-50 T 12-10-2018 IPR007446 Pilus assembly protein PilP K04M3_28860 c10262443ce73511ab2238ef0ffb53ac 171 Gene3D G3DSA:2.30.30.830 79 171 1.5E-25 T 12-10-2018 K04M3_18860 15df1356cb25d183e729d3b5d8e47cce 203 Pfam PF07274 Protein of unknown function (DUF1440) 26 181 8.9E-53 T 12-10-2018 IPR009898 Protein of unknown function DUF1440 K04M3_17750 d0eb54a1091097d9a925dfbf19b6ace9 383 Pfam PF12698 ABC-2 family transporter protein 22 367 8.0E-40 T 12-10-2018 K04M3_01390 6c3a823260e7b95ba18aa3bcc8a15a24 131 Pfam PF06476 Protein of unknown function (DUF1090) 18 119 9.4E-34 T 12-10-2018 IPR009468 Protein of unknown function DUF1090 K04M3_16410 769bf5dc181b5ec7fbfd93e24fcf49b4 882 Pfam PF02470 MlaD protein 298 356 3.4E-6 T 12-10-2018 IPR003399 Mce/MlaD K04M3_16410 769bf5dc181b5ec7fbfd93e24fcf49b4 882 Pfam PF02470 MlaD protein 753 811 5.9E-7 T 12-10-2018 IPR003399 Mce/MlaD K04M3_16410 769bf5dc181b5ec7fbfd93e24fcf49b4 882 Pfam PF02470 MlaD protein 398 463 5.0E-6 T 12-10-2018 IPR003399 Mce/MlaD K04M3_16410 769bf5dc181b5ec7fbfd93e24fcf49b4 882 Pfam PF02470 MlaD protein 163 222 3.4E-6 T 12-10-2018 IPR003399 Mce/MlaD K04M3_16410 769bf5dc181b5ec7fbfd93e24fcf49b4 882 Pfam PF02470 MlaD protein 47 138 1.7E-12 T 12-10-2018 IPR003399 Mce/MlaD K04M3_40180 77c91df5d64d6129c16867be303d8ad7 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 421 2.4E-61 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 K04M3_39000 e5789ba042ba47a65f6ddad1c360a93a 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 441 1.7E-141 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 K04M3_39000 e5789ba042ba47a65f6ddad1c360a93a 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 1.9E-124 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 K04M3_36090 ccf96911fc64d61c4338714680b099eb 90 Pfam PF07383 Protein of unknown function (DUF1496) 36 86 3.7E-22 T 12-10-2018 IPR009971 Protein of unknown function DUF1496 K04M3_02390 8eaa8be68b71e36d849c8f5bff0a5981 59 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 5.5E-23 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA K04M3_42280 3e242ebadb05314d1435f6e4bdd0c09c 236 SUPERFAMILY SSF69318 72 155 3.79E-5 T 12-10-2018 K04M3_08810 0f7b5d15d5281784877c43da7c3b2768 203 Pfam PF11659 Protein of unknown function (DUF3261) 55 198 9.2E-32 T 12-10-2018 IPR021675 Protein of unknown function DUF3261 K04M3_49300 05af5c11bbc1181759e86c55f0dd088d 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 7.2E-30 T 12-10-2018 IPR021432 Protein of unknown function DUF3081 K04M3_15710 4703bb2b3914a46a9c998a7892e26f41 271 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 3.6E-24 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 K04M3_14530 b265efe1804a93c72ce88d6783370d6d 228 PIRSF PIRSF006324 17 227 1.5E-55 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_14530 b265efe1804a93c72ce88d6783370d6d 228 Pfam PF01810 LysE type translocator 32 225 4.8E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_18520 eda3a30cf9369ec1e2f9a6fed93e9b48 397 Pfam PF01103 Surface antigen 102 370 1.6E-6 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 K04M3_18520 eda3a30cf9369ec1e2f9a6fed93e9b48 397 Gene3D G3DSA:2.40.160.50 88 394 1.9E-14 T 12-10-2018 K04M3_52370 012d808d9a4eef663e4d5e3d9683c28c 273 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 68 157 7.3E-7 T 12-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component K04M3_43560 a41766468cea12afa7a614427d3e4447 279 Pfam PF04116 Fatty acid hydroxylase superfamily 86 220 3.5E-31 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 K04M3_40070 93e66db8d2ecec3e3d44fa09e26d984f 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 3.4E-25 T 12-10-2018 IPR025232 Domain of unknown function DUF4174 K04M3_44300 01581b3a200e3a0e9781b7df06b3aa0e 718 Gene3D G3DSA:1.10.530.70 504 671 1.7E-12 T 12-10-2018 K04M3_44300 01581b3a200e3a0e9781b7df06b3aa0e 718 SUPERFAMILY SSF53955 527 678 8.15E-16 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily K04M3_35100 cc017872dee42e5395a8f7f87a066203 279 Pfam PF02361 Cobalt transport protein 18 236 1.1E-33 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component K04M3_10090 91f978159f20aa7daaa36c086e570faf 158 Pfam PF05433 Glycine zipper 2TM domain 63 100 7.2E-10 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 K04M3_36150 b8b17da590b17c26fe01e11958f06d59 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 8.2E-22 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 K04M3_49390 cd64fb34449114eda3aca186dcea6bca 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 2.2E-25 T 12-10-2018 IPR007263 Protein of unknown function DUF393 K04M3_31010 8a74a11459a4c71f774729a4efbeda2b 322 PIRSF PIRSF003097 24 318 1.9E-60 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 K04M3_39230 987c28df5316b1840c7beb4632648dea 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 3.1E-137 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 K04M3_07520 bfd22c6b36dc0a8449359ef72d85e4e0 149 Pfam PF04214 Protein of unknown function, DUF 48 118 7.9E-30 T 12-10-2018 IPR007332 Protein of unknown function DUF411 K04M3_09660 ca7d8dcbad10d3ddc58b2f942a09e0a3 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 7 254 1.5E-65 T 12-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV K04M3_13150 ce0869e736a55e96fdc47757275f123d 190 Pfam PF07209 Protein of unknown function (DUF1415) 14 182 4.0E-66 T 12-10-2018 IPR009858 Protein of unknown function DUF1415 K04M3_44050 0851f45d988995581e6f884d7c27c38f 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 5.5E-32 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 K04M3_16220 665b402e0361b901c38dcaade6d50cd4 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 2.1E-41 T 12-10-2018 IPR022090 Protein of unknown function DUF3634 K04M3_33800 f03cdfca0c5f4de14f66d0dd0fe1f230 245 Pfam PF07670 Nucleoside recognition 85 179 6.8E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_22620 212847b017afcde4290cd318c31b24ac 166 Pfam PF10975 Protein of unknown function (DUF2802) 70 137 9.8E-23 T 12-10-2018 IPR021244 Protein of unknown function DUF2802 K04M3_03130 1852dd400204de4875663bf547a65645 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 919 1253 3.1E-64 T 12-10-2018 IPR007452 Translocation and assembly module TamB K04M3_07610 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 3.2E-118 T 12-10-2018 IPR014549 Flagellar protein FlgO K04M3_33810 f264b689f9cb99d15e5e86f5d461d46c 155 Pfam PF07670 Nucleoside recognition 31 124 1.0E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 K04M3_40700 f284d13d2bda9934068a6e3f800703ed 487 Pfam PF06527 TniQ 6 127 2.8E-13 T 12-10-2018 IPR009492 TniQ K04M3_01980 fe1df5ac9fc8611b94acef07504248d3 252 Pfam PF06251 Capsule biosynthesis GfcC 29 245 1.1E-18 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 K04M3_18020 dd10e0c8fd7ce6273cb9b0111ba1309f 137 Pfam PF06271 RDD family 15 129 1.5E-10 T 12-10-2018 IPR010432 RDD K04M3_27180 b2195a39d9a2f57b00148afd18e2644e 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 2.5E-27 T 12-10-2018 IPR018692 Predicted integral membrane protein DUF2189 K04M3_23020 8bcdd7d09b8d40284f47347e25aa7d19 120 Pfam PF11169 Protein of unknown function (DUF2956) 15 116 4.0E-43 T 12-10-2018 IPR021339 Protein of unknown function DUF2956 K04M3_11450 75677c610c7a8b0e4426af652a6a3b98 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.5E-94 T 12-10-2018 IPR014319 Phage shock protein, PspA K04M3_11450 75677c610c7a8b0e4426af652a6a3b98 223 Pfam PF04012 PspA/IM30 family 2 217 1.7E-61 T 12-10-2018 IPR007157 PspA/IM30 K04M3_06140 6fa6472f3c8e711908b6acd3491ad9c2 279 Gene3D G3DSA:3.20.20.70 4 279 7.0E-58 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 K04M3_06140 6fa6472f3c8e711908b6acd3491ad9c2 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 278 2.8E-58 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 K04M3_35280 02271acce9b83cb4d2fb4131ff31ea4c 483 Pfam PF07603 Protein of unknown function (DUF1566) 291 424 1.6E-11 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 K04M3_46060 37862836f70094be2f611971c72db487 116 Pfam PF13698 Domain of unknown function (DUF4156) 30 114 4.9E-22 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 K04M3_11020 2efed692085f39e2970f3ef0c385c154 177 Pfam PF12915 Protein of unknown function (DUF3833) 15 175 2.3E-65 T 12-10-2018 IPR024409 Protein of unknown function DUF3833 K04M3_51130 66b51d99bbafac0762bce0847412642c 188 Gene3D G3DSA:3.55.50.60 41 167 2.8E-5 T 12-10-2018 IPR038140 DotD superfamily K04M3_37040 e687fcc135461e1d8c51b3637fec398e 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 1.9E-29 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 K04M3_49010 9e5ec41632ba3683efd4b21fa24319cf 151 SUPERFAMILY SSF56524 29 148 3.01E-12 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 K04M3_18330 e9d0e27ebf4aa99f780faff30515e372 300 Pfam PF10754 Protein of unknown function (DUF2569) 6 156 2.9E-35 T 12-10-2018 IPR019690 Protein of unknown function DUF2569 K04M3_14890 bb8fc187240969df718315fea3343755 185 Pfam PF12570 Protein of unknown function (DUF3750) 50 182 6.0E-49 T 12-10-2018 IPR022224 Protein of unknown function DUF3750 K04M3_17300 aeb0bb9d47275bfa8637ca0e66c8c6aa 403 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 264 400 2.1E-45 T 12-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 K04M3_11000 3d6f77ddfb0b97836955ce02a632467a 170 Pfam PF11086 Protein of unknown function (DUF2878) 5 151 9.3E-31 T 12-10-2018 IPR021306 Protein of unknown function DUF2878 K04M3_36080 4754c680abfce48935a95df2b9f92e65 199 Gene3D G3DSA:3.80.10.10 7 195 1.8E-5 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily K04M3_07510 94eaddd0e2f36f68d19a497d62f1a0df 230 Gene3D G3DSA:2.40.160.40 38 230 7.4E-13 T 12-10-2018 K04M3_07510 94eaddd0e2f36f68d19a497d62f1a0df 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 180 8.2E-6 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin K04M3_06060 f608068a3299b1aabf3652721e0ee6ed 507 Pfam PF03553 Na+/H+ antiporter family 161 469 6.0E-51 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 K04M3_06720 a9d911a1bc5be0ebcf5b15c707752e36 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 8.4E-29 T 12-10-2018 IPR006696 Protein of unknown function DUF423 K04M3_37750 b6fe37164f00049b865fb18e9e43c38b 485 Pfam PF11840 Protein of unknown function (DUF3360) 2 484 4.8E-266 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 K04M3_50400 44455bdaefa7263c44531cc1afe3ff57 377 Pfam PF13729 F plasmid transfer operon, TraF, protein 48 294 8.4E-54 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related K04M3_52070 6cbad5120b9b24843357f403895d15b4 183 Pfam PF04471 Restriction endonuclease 61 170 1.0E-11 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 K04M3_48290 061a2d2b6867489807101a519a06bcc3 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 2.1E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel K04M3_12850 025601cf03bd242a561bf5f73f4f569c 644 Pfam PF05876 Phage terminase large subunit (GpA) 4 592 1.1E-103 T 12-10-2018 IPR008866 Bacteriophage lambda, GpA K04M3_49380 cec039af0eddee471d96f126361da77d 264 Pfam PF14247 Putative metallopeptidase 28 250 2.3E-64 T 12-10-2018 IPR025644 Putative metallopeptidase K04M3_10530 2967def12b9dc15704ae55e5a5f652e0 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 6.9E-26 T 12-10-2018 IPR009576 Biofilm formation YgiB K04M3_17740 a4c070883b258b1c6085bf7ce17771f2 388 Pfam PF12698 ABC-2 family transporter protein 15 369 5.1E-41 T 12-10-2018 K04M3_46800 a9a020d66884246f00b9bcb94119edb9 172 Pfam PF05433 Glycine zipper 2TM domain 67 108 3.7E-9 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 K04M3_48930 6d779c4e5075278ad5c706219e42c014 194 Pfam PF01810 LysE type translocator 17 188 8.1E-16 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 K04M3_01000 84abcefed03c10759a834b5f66cf608b 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 2.5E-45 T 12-10-2018 IPR019617 Domain of unknown function DUF2489 K04M3_51220 0696583359d89e28e97f68f8f565456e 529 Pfam PF00263 Bacterial type II and III secretion system protein 354 525 1.9E-8 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 K04M3_03870 2a3a0e0a58141f7e2c18eb58e8d0b1b0 228 Pfam PF16537 Type II secretion system protein B 163 222 4.0E-25 T 12-10-2018 IPR032389 Type II secretion system protein B K04M3_38400 cce4e0d7fa1c0d32ccc819a95acdbcc6 533 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 43 521 8.5E-143 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 K04M3_02160 ba703819e7a38a8820fedbfcbe0047fb 358 SUPERFAMILY SSF48208 37 148 4.59E-7 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 K04M3_15440 2695a9fb5a9c3d682065a3c279d40ae4 454 Pfam PF04932 O-Antigen ligase 240 377 3.8E-19 T 12-10-2018 IPR007016 O-antigen ligase-related K04M3_44160 697495208d88f0cc0dd56481948a2acb 92 PIRSF PIRSF028784 1 92 2.2E-28 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 K04M3_44160 697495208d88f0cc0dd56481948a2acb 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.1E-15 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 K04M3_42440 54672e64eb45d01fb897d6ba72525fc5 164 Pfam PF14317 YcxB-like protein 99 154 1.1E-6 T 12-10-2018 IPR025588 YcxB-like protein