K04M5_00010 SM00382 ATPases associated with a variety of cellular activities K04M5_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain K04M5_00020 SM00480 DNA polymerase III beta subunit K04M5_00040 SM00387 Histidine kinase-like ATPases K04M5_00040 SM00433 TopoisomeraseII K04M5_00090 SM00642 Alpha-amylase domain K04M5_00170 SM00829 Enoylreductase K04M5_00430 SM00382 ATPases associated with a variety of cellular activities K04M5_00480 SM00354 helix_turn _helix lactose operon repressor K04M5_00610 SM00344 helix_turn_helix ASNC type K04M5_00620 SM00052 Putative diguanylate phosphodiesterase K04M5_00620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M5_00620 SM00091 PAS domain K04M5_00620 SM00267 diguanylate cyclase K04M5_00700 SM00382 ATPases associated with a variety of cellular activities K04M5_00710 SM00749 bacterial OsmY and nodulation domain K04M5_00750 SM00046 Diacylglycerol kinase catalytic domain (presumed) K04M5_00750 SM00195 Dual specificity phosphatase, catalytic domain K04M5_00750 SM00404 Protein tyrosine phosphatase, catalytic domain motif K04M5_00820 SM00052 Putative diguanylate phosphodiesterase K04M5_00820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M5_00820 SM00091 PAS domain K04M5_00820 SM00267 diguanylate cyclase K04M5_00920 SM01004 Delta-aminolevulinic acid dehydratase K04M5_00950 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K04M5_00950 SM00474 3'-5' exonuclease K04M5_00950 SM00475 5'-3' exonuclease K04M5_00950 SM00482 DNA polymerase A domain K04M5_01010 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_01030 SM00052 Putative diguanylate phosphodiesterase K04M5_01030 SM00267 diguanylate cyclase K04M5_01030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_01040 SM00382 ATPases associated with a variety of cellular activities K04M5_01040 SM00448 cheY-homologous receiver domain K04M5_01050 SM00091 PAS domain K04M5_01050 SM00387 Histidine kinase-like ATPases K04M5_01050 SM00388 His Kinase A (phosphoacceptor) domain K04M5_01070 SM01230 K04M5_01070 K04M5_01170 SM00363 S4 RNA-binding domain K04M5_01200 SM00382 ATPases associated with a variety of cellular activities K04M5_01360 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_01360 SM00732 Likely ribonuclease with RNase H fold. K04M5_01400 SM00448 cheY-homologous receiver domain K04M5_01400 SM00862 Transcriptional regulatory protein, C terminal K04M5_01410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_01410 SM00387 Histidine kinase-like ATPases K04M5_01410 SM00388 His Kinase A (phosphoacceptor) domain K04M5_01430 SM00487 DEAD-like helicases superfamily K04M5_01430 SM00490 helicase superfamily c-terminal domain K04M5_01450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_01450 SM00954 Region found in RelA / SpoT proteins K04M5_01460 SM01409 K04M5_01460 K04M5_01470 SM00072 Guanylate kinase homologues. K04M5_01480 SM00028 Tetratricopeptide repeats K04M5_01580 SM00382 ATPases associated with a variety of cellular activities K04M5_01590 SM00382 ATPases associated with a variety of cellular activities K04M5_01670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_01670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_01670 SM01049 K04M5_01670 K04M5_01720 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain K04M5_01720 SM01232 K04M5_01720 K04M5_01740 SM00672 Putative lipopolysaccharide-modifying enzyme. K04M5_02050 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M5_02050 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M5_02120 SM00849 Metallo-beta-lactamase superfamily K04M5_02120 SM01027 Beta-Casp domain K04M5_02210 SM00984 UDP binding domain K04M5_02410 SM00448 cheY-homologous receiver domain K04M5_02420 SM00091 PAS domain K04M5_02420 SM00387 Histidine kinase-like ATPases K04M5_02470 SM00764 Citrate lyase ligase C-terminal domain K04M5_02550 SM00382 ATPases associated with a variety of cellular activities K04M5_02550 SM01086 C-terminal, D2-small domain, of ClpB protein K04M5_02590 SM00354 helix_turn _helix lactose operon repressor K04M5_02600 SM00487 DEAD-like helicases superfamily K04M5_02600 SM00490 helicase superfamily c-terminal domain K04M5_02620 SM01403 K04M5_02620 K04M5_02660 SM01382 K04M5_02660 K04M5_02660 SM01383 K04M5_02660 K04M5_02690 SM00322 K homology RNA-binding domain K04M5_02730 SM01374 K04M5_02730 K04M5_02740 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K04M5_02870 SM00363 S4 RNA-binding domain K04M5_02870 SM01390 K04M5_02870 K04M5_02880 SM00662 RNA polymerases D K04M5_02940 SM00487 DEAD-like helicases superfamily K04M5_02940 SM00490 helicase superfamily c-terminal domain K04M5_03060 SM00382 ATPases associated with a variety of cellular activities K04M5_03220 SM00382 ATPases associated with a variety of cellular activities K04M5_03400 SM00650 Ribosomal RNA adenine dimethylases K04M5_03440 SM00271 DnaJ molecular chaperone homology domain K04M5_03480 SM01329 K04M5_03480 K04M5_03490 SM00917 LeuA allosteric (dimerisation) domain K04M5_03510 SM00014 Acid phosphatase homologues K04M5_03570 SM00267 diguanylate cyclase K04M5_03580 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_03600 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M5_03600 SM01134 K04M5_03600 K04M5_03640 SM01120 K04M5_03640 K04M5_03700 SM00563 Phosphate acyltransferases K04M5_03760 SM00400 zinc finger K04M5_03760 SM00493 K04M5_03760 K04M5_03760 SM00766 DNA primase DnaG DnaB-binding K04M5_03810 SM01207 K04M5_03810 K04M5_03820 SM00905 Dihydroneopterin aldolase K04M5_03860 SM00382 ATPases associated with a variety of cellular activities K04M5_03890 SM00287 Bacterial SH3 domain homologues K04M5_03920 SM00880 K04M5_03920 K04M5_03920 SM01118 K04M5_03920 K04M5_03940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_04020 SM00387 Histidine kinase-like ATPases K04M5_04020 SM00433 TopoisomeraseII K04M5_04030 SM00434 DNA Topoisomerase IV K04M5_04040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M5_04050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M5_04170 SM00749 bacterial OsmY and nodulation domain K04M5_04330 SM00842 Cell division protein FtsA K04M5_04340 SM00864 Tubulin/FtsZ family, GTPase domain K04M5_04340 SM00865 Tubulin/FtsZ family, C-terminal domain K04M5_04370 SM00957 SecA DEAD-like domain K04M5_04370 SM00958 SecA preprotein cross-linking domain K04M5_04400 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain K04M5_04410 SM00851 MGS-like domain K04M5_04410 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K04M5_04550 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_04560 SM00091 PAS domain K04M5_04560 SM00267 diguanylate cyclase K04M5_04570 SM00073 Histidine Phosphotransfer domain K04M5_04570 SM00091 PAS domain K04M5_04570 SM00387 Histidine kinase-like ATPases K04M5_04570 SM00388 His Kinase A (phosphoacceptor) domain K04M5_04570 SM00448 cheY-homologous receiver domain K04M5_04590 SM00448 cheY-homologous receiver domain K04M5_04590 SM00862 Transcriptional regulatory protein, C terminal K04M5_04680 SM00518 AP endonuclease family 2 K04M5_04690 SM00986 Uracil DNA glycosylase superfamily K04M5_04690 SM00987 UreE urease accessory protein, C-terminal domain K04M5_04740 SM00487 DEAD-like helicases superfamily K04M5_04740 SM00490 helicase superfamily c-terminal domain K04M5_04810 SM00937 K04M5_04810 K04M5_04830 SM00382 ATPases associated with a variety of cellular activities K04M5_04880 SM00927 DNA mismatch repair enzyme MutH K04M5_04900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M5_04940 SM01154 K04M5_04940 K04M5_04970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M5_05000 SM00904 Riboflavin kinase K04M5_05050 SM00226 Low molecular weight phosphatase family K04M5_05060 SM00448 cheY-homologous receiver domain K04M5_05060 SM00850 LytTr DNA-binding domain K04M5_05150 SM00830 Chorismate mutase type II K04M5_05180 SM00382 ATPases associated with a variety of cellular activities K04M5_05220 SM00830 Chorismate mutase type II K04M5_05240 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_05260 SM00363 S4 RNA-binding domain K04M5_05280 SM00382 ATPases associated with a variety of cellular activities K04M5_05280 SM01086 C-terminal, D2-small domain, of ClpB protein K04M5_05440 SM00448 cheY-homologous receiver domain K04M5_05440 SM00862 Transcriptional regulatory protein, C terminal K04M5_05450 SM00091 PAS domain K04M5_05450 SM00387 Histidine kinase-like ATPases K04M5_05450 SM00388 His Kinase A (phosphoacceptor) domain K04M5_05510 SM00382 ATPases associated with a variety of cellular activities K04M5_05590 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_05600 SM00020 Trypsin-like serine protease K04M5_05630 SM01323 K04M5_05630 K04M5_05740 SM00271 DnaJ molecular chaperone homology domain K04M5_05790 SM00562 K04M5_05790 K04M5_05810 SM00530 Helix-turn-helix XRE-family like proteins K04M5_05850 SM00564 beta-propeller repeat K04M5_05860 SM00382 ATPases associated with a variety of cellular activities K04M5_05900 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_05900 SM01240 K04M5_05900 K04M5_05930 SM00028 Tetratricopeptide repeats K04M5_06070 SM00495 Chitin-binding domain type 3 K04M5_06340 SM00271 DnaJ molecular chaperone homology domain K04M5_06420 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_06430 SM01211 K04M5_06430 K04M5_06540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K04M5_06640 SM00861 Transketolase, pyrimidine binding domain K04M5_06690 SM00981 K04M5_06690 K04M5_06750 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K04M5_06750 SM00475 5'-3' exonuclease K04M5_06770 SM00267 diguanylate cyclase K04M5_06780 SM00028 Tetratricopeptide repeats K04M5_06840 SM00382 ATPases associated with a variety of cellular activities K04M5_06840 SM00930 K04M5_06840 K04M5_06860 SM00354 helix_turn _helix lactose operon repressor K04M5_06880 SM00642 Alpha-amylase domain K04M5_06900 SM00862 Transcriptional regulatory protein, C terminal K04M5_06930 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_06960 SM00936 Penicillin-binding protein 5, C-terminal domain K04M5_07070 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_07070 SM01091 Transporter associated domain K04M5_07100 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_07340 SM01400 K04M5_07340 K04M5_07380 SM00937 K04M5_07380 K04M5_07450 SM00363 S4 RNA-binding domain K04M5_07460 SM00463 Small MutS-related domain K04M5_07510 SM01081 Putative carbohydrate binding domain K04M5_07660 SM00858 K04M5_07660 K04M5_07670 SM00260 Two component signalling adaptor domain K04M5_07670 SM00448 cheY-homologous receiver domain K04M5_07680 SM00138 Methyltransferase, chemotaxis proteins K04M5_07770 SM00047 Lysozyme subfamily 2 K04M5_07890 SM00771 ZipA, C-terminal domain (FtsZ-binding) K04M5_07900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M5_07900 SM00292 breast cancer carboxy-terminal domain K04M5_07900 SM00532 Ligase N family K04M5_07950 SM00244 prohibitin homologues K04M5_08040 SM00028 Tetratricopeptide repeats K04M5_08100 SM00938 Nitrogen regulatory protein P-II K04M5_08110 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_08170 SM00862 Transcriptional regulatory protein, C terminal K04M5_08180 SM00387 Histidine kinase-like ATPases K04M5_08220 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K04M5_08430 SM00861 Transketolase, pyrimidine binding domain K04M5_08460 SM00881 CoA binding domain K04M5_08480 SM00382 ATPases associated with a variety of cellular activities K04M5_08500 SM00342 helix_turn_helix, arabinose operon control protein K04M5_08510 SM00899 K04M5_08510 K04M5_08560 SM00836 DALR anticodon binding domain K04M5_08560 SM01016 Arginyl tRNA synthetase N terminal dom K04M5_08590 SM00020 Trypsin-like serine protease K04M5_08610 SM00487 DEAD-like helicases superfamily K04M5_08610 SM00491 K04M5_08610 K04M5_08670 SM00474 3'-5' exonuclease K04M5_08780 SM00825 Beta-ketoacyl synthase K04M5_08790 SM00822 K04M5_08790 K04M5_08810 SM00825 Beta-ketoacyl synthase K04M5_08930 SM00563 Phosphate acyltransferases K04M5_08990 SM00487 DEAD-like helicases superfamily K04M5_08990 SM00490 helicase superfamily c-terminal domain K04M5_09100 SM00382 ATPases associated with a variety of cellular activities K04M5_09100 SM00448 cheY-homologous receiver domain K04M5_09110 SM00387 Histidine kinase-like ATPases K04M5_09110 SM00388 His Kinase A (phosphoacceptor) domain K04M5_09140 SM00382 ATPases associated with a variety of cellular activities K04M5_09140 SM00994 ClpX C4-type zinc finger K04M5_09140 SM01086 C-terminal, D2-small domain, of ClpB protein K04M5_09150 SM00382 ATPases associated with a variety of cellular activities K04M5_09150 SM00464 Found in ATP-dependent protease La (LON) K04M5_09160 SM00411 bacterial (prokaryotic) histone like domain K04M5_09180 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M5_09200 SM01144 K04M5_09200 K04M5_09210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_09220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_09280 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K04M5_09320 SM00563 Phosphate acyltransferases K04M5_09340 SM00978 K04M5_09340 K04M5_09460 SM00344 helix_turn_helix ASNC type K04M5_09520 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_09520 SM00267 diguanylate cyclase K04M5_09540 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_09580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_09580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_09680 SM00487 DEAD-like helicases superfamily K04M5_09680 SM00490 helicase superfamily c-terminal domain K04M5_09680 SM00982 K04M5_09680 K04M5_09680 SM01058 CarD-like/TRCF domain K04M5_09710 SM00382 ATPases associated with a variety of cellular activities K04M5_09740 SM00849 Metallo-beta-lactamase superfamily K04M5_09750 SM00382 ATPases associated with a variety of cellular activities K04M5_09810 SM00763 PrkA AAA domain K04M5_09890 SM00382 ATPases associated with a variety of cellular activities K04M5_09900 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_09900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M5_09930 SM01276 K04M5_09930 K04M5_09980 SM00491 K04M5_09980 K04M5_10040 SM00357 Cold shock protein domain K04M5_10060 SM00382 ATPases associated with a variety of cellular activities K04M5_10060 SM01086 C-terminal, D2-small domain, of ClpB protein K04M5_10070 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_10130 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M5_10130 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M5_10130 SM00493 K04M5_10130 K04M5_10200 SM00354 helix_turn _helix lactose operon repressor K04M5_10220 SM00448 cheY-homologous receiver domain K04M5_10220 SM00862 Transcriptional regulatory protein, C terminal K04M5_10380 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M5_10390 SM00382 ATPases associated with a variety of cellular activities K04M5_10500 SM00028 Tetratricopeptide repeats K04M5_10570 SM00387 Histidine kinase-like ATPases K04M5_10570 SM00388 His Kinase A (phosphoacceptor) domain K04M5_10570 SM00448 cheY-homologous receiver domain K04M5_10690 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_10750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_10800 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M5_10800 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M5_10810 SM00344 helix_turn_helix ASNC type K04M5_10820 SM00843 K04M5_10820 K04M5_10840 SM00382 ATPases associated with a variety of cellular activities K04M5_10900 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_10900 SM00876 Biotin and Thiamin Synthesis associated domain K04M5_11090 SM00528 Domain in histone-like proteins of HNS family K04M5_11200 SM00052 Putative diguanylate phosphodiesterase K04M5_11230 SM00840 K04M5_11230 K04M5_11380 SM01131 K04M5_11380 K04M5_11400 SM00382 ATPases associated with a variety of cellular activities K04M5_11410 SM00382 ATPases associated with a variety of cellular activities K04M5_11450 SM00382 ATPases associated with a variety of cellular activities K04M5_11560 SM00155 Phospholipase D. Active site motifs. K04M5_11620 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M5_11620 SM00382 ATPases associated with a variety of cellular activities K04M5_11650 SM00382 ATPases associated with a variety of cellular activities K04M5_11740 SM00387 Histidine kinase-like ATPases K04M5_11750 SM00448 cheY-homologous receiver domain K04M5_11750 SM00862 Transcriptional regulatory protein, C terminal K04M5_11770 SM00487 DEAD-like helicases superfamily K04M5_11770 SM00490 helicase superfamily c-terminal domain K04M5_11780 SM00363 S4 RNA-binding domain K04M5_11830 SM00382 ATPases associated with a variety of cellular activities K04M5_12020 SM00448 cheY-homologous receiver domain K04M5_12030 SM00387 Histidine kinase-like ATPases K04M5_12070 SM00382 ATPases associated with a variety of cellular activities K04M5_12080 SM00382 ATPases associated with a variety of cellular activities K04M5_12130 SM00267 diguanylate cyclase K04M5_12160 SM00919 Malic enzyme, NAD binding domain K04M5_12160 SM01274 K04M5_12160 K04M5_12170 SM00487 DEAD-like helicases superfamily K04M5_12170 SM00490 helicase superfamily c-terminal domain K04M5_12340 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_12340 SM00866 K04M5_12340 K04M5_12370 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M5_12420 SM00530 Helix-turn-helix XRE-family like proteins K04M5_12490 SM00873 B3/4 domain K04M5_12490 SM00874 tRNA synthetase B5 domain K04M5_12490 SM00896 Ferredoxin-fold anticodon binding domain K04M5_12510 SM00411 bacterial (prokaryotic) histone like domain K04M5_12580 SM00479 K04M5_12580 K04M5_13100 SM00855 Phosphoglycerate mutase family K04M5_13140 SM00382 ATPases associated with a variety of cellular activities K04M5_13230 SM00245 tail specific protease K04M5_13250 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_13250 SM00895 K04M5_13250 K04M5_13310 SM01130 K04M5_13310 K04M5_13320 SM00382 ATPases associated with a variety of cellular activities K04M5_13360 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K04M5_13380 SM00382 ATPases associated with a variety of cellular activities K04M5_13390 SM00382 ATPases associated with a variety of cellular activities K04M5_13660 SM01230 K04M5_13660 K04M5_13680 SM00530 Helix-turn-helix XRE-family like proteins K04M5_13750 SM00052 Putative diguanylate phosphodiesterase K04M5_13770 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_13830 SM00387 Histidine kinase-like ATPases K04M5_13830 SM00388 His Kinase A (phosphoacceptor) domain K04M5_13830 SM00448 cheY-homologous receiver domain K04M5_13840 SM00052 Putative diguanylate phosphodiesterase K04M5_13840 SM00267 diguanylate cyclase K04M5_13860 SM00028 Tetratricopeptide repeats K04M5_13920 SM00857 Resolvase, N terminal domain K04M5_13930 SM00530 Helix-turn-helix XRE-family like proteins K04M5_13990 SM00857 Resolvase, N terminal domain K04M5_14280 SM00382 ATPases associated with a variety of cellular activities K04M5_14290 SM00100 Cyclic nucleotide-monophosphate binding domain K04M5_14290 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_14300 SM00479 K04M5_14300 K04M5_14370 SM00028 Tetratricopeptide repeats K04M5_14450 SM00382 ATPases associated with a variety of cellular activities K04M5_14500 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M5_14500 SM01134 K04M5_14500 K04M5_14530 SM00267 diguanylate cyclase K04M5_14580 SM00100 Cyclic nucleotide-monophosphate binding domain K04M5_14580 SM00387 Histidine kinase-like ATPases K04M5_14590 SM00448 cheY-homologous receiver domain K04M5_14600 SM00052 Putative diguanylate phosphodiesterase K04M5_14600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M5_14600 SM00091 PAS domain K04M5_14600 SM00267 diguanylate cyclase K04M5_14610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_14670 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. K04M5_14680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_14730 SM00382 ATPases associated with a variety of cellular activities K04M5_14780 SM00382 ATPases associated with a variety of cellular activities K04M5_14790 SM00382 ATPases associated with a variety of cellular activities K04M5_14900 SM00267 diguanylate cyclase K04M5_14900 SM01079 K04M5_14900 K04M5_14910 SM00479 K04M5_14910 K04M5_14990 SM00382 ATPases associated with a variety of cellular activities K04M5_14990 SM00487 DEAD-like helicases superfamily K04M5_14990 SM00490 helicase superfamily c-terminal domain K04M5_14990 SM00847 Helicase associated domain (HA2) Add an annotation K04M5_15140 SM00382 ATPases associated with a variety of cellular activities K04M5_15140 SM00448 cheY-homologous receiver domain K04M5_15270 SM00448 cheY-homologous receiver domain K04M5_15280 SM00267 diguanylate cyclase K04M5_15310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_15370 SM01144 K04M5_15370 K04M5_15400 SM00852 Probable molybdopterin binding domain K04M5_15420 SM00382 ATPases associated with a variety of cellular activities K04M5_15450 SM00382 ATPases associated with a variety of cellular activities K04M5_15450 SM00448 cheY-homologous receiver domain K04M5_15460 SM00387 Histidine kinase-like ATPases K04M5_15460 SM00388 His Kinase A (phosphoacceptor) domain K04M5_15470 SM00382 ATPases associated with a variety of cellular activities K04M5_15550 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M5_15680 SM00382 ATPases associated with a variety of cellular activities K04M5_15740 SM00100 Cyclic nucleotide-monophosphate binding domain K04M5_15740 SM00419 helix_turn_helix, cAMP Regulatory protein K04M5_15840 SM00897 FIST N domain K04M5_15840 SM01204 K04M5_15840 K04M5_15850 SM00387 Histidine kinase-like ATPases K04M5_15850 SM00388 His Kinase A (phosphoacceptor) domain K04M5_15850 SM00448 cheY-homologous receiver domain K04M5_15930 SM00382 ATPases associated with a variety of cellular activities K04M5_15950 SM00981 K04M5_15950 K04M5_16010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M5_16010 SM00245 tail specific protease K04M5_16020 SM00945 ProQ/FINO family K04M5_16040 SM00382 ATPases associated with a variety of cellular activities K04M5_16140 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_16180 SM00382 ATPases associated with a variety of cellular activities K04M5_16230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_16240 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K04M5_16250 SM00327 von Willebrand factor (vWF) type A domain K04M5_16280 SM00112 Cadherin repeats. K04M5_16280 SM00237 Domains in Na-Ca exchangers and integrin-beta4 K04M5_16280 SM00327 von Willebrand factor (vWF) type A domain K04M5_16280 SM00736 Dystroglycan-type cadherin-like domains. K04M5_16320 SM00028 Tetratricopeptide repeats K04M5_16320 SM00267 diguanylate cyclase K04M5_16330 SM00346 helix_turn_helix isocitrate lyase regulation K04M5_16410 SM00829 Enoylreductase K04M5_16420 SM00342 helix_turn_helix, arabinose operon control protein K04M5_16440 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_16440 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M5_16460 SM00829 Enoylreductase K04M5_16480 SM00382 ATPases associated with a variety of cellular activities K04M5_16500 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_16500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M5_16610 SM00530 Helix-turn-helix XRE-family like proteins K04M5_16660 SM00020 Trypsin-like serine protease K04M5_16660 SM00495 Chitin-binding domain type 3 K04M5_16730 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_16730 SM00895 K04M5_16730 K04M5_16930 SM00382 ATPases associated with a variety of cellular activities K04M5_17010 SM00342 helix_turn_helix, arabinose operon control protein K04M5_17210 SM00342 helix_turn_helix, arabinose operon control protein K04M5_17260 SM00382 ATPases associated with a variety of cellular activities K04M5_17290 SM01350 K04M5_17290 K04M5_17320 SM00342 helix_turn_helix, arabinose operon control protein K04M5_17320 SM00871 Bacterial transcription activator, effector binding domain K04M5_17340 SM00448 cheY-homologous receiver domain K04M5_17350 SM00091 PAS domain K04M5_17350 SM00387 Histidine kinase-like ATPases K04M5_17470 SM01350 K04M5_17470 K04M5_17540 SM00342 helix_turn_helix, arabinose operon control protein K04M5_17540 SM00871 Bacterial transcription activator, effector binding domain K04M5_17570 SM00448 cheY-homologous receiver domain K04M5_17580 SM00091 PAS domain K04M5_17580 SM00387 Histidine kinase-like ATPases K04M5_17870 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M5_17890 SM01266 K04M5_17890 K04M5_18180 SM00547 Zinc finger domain K04M5_18190 SM00507 HNH nucleases K04M5_18350 SM00267 diguanylate cyclase K04M5_18570 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M5_18600 SM00387 Histidine kinase-like ATPases K04M5_18600 SM00388 His Kinase A (phosphoacceptor) domain K04M5_18600 SM00448 cheY-homologous receiver domain K04M5_18620 SM00530 Helix-turn-helix XRE-family like proteins K04M5_18680 SM00342 helix_turn_helix, arabinose operon control protein K04M5_18750 SM00052 Putative diguanylate phosphodiesterase K04M5_18760 SM00421 helix_turn_helix, Lux Regulon K04M5_18760 SM00448 cheY-homologous receiver domain K04M5_18930 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_18930 SM00387 Histidine kinase-like ATPases K04M5_18930 SM00388 His Kinase A (phosphoacceptor) domain K04M5_18930 SM00448 cheY-homologous receiver domain K04M5_18940 SM00421 helix_turn_helix, Lux Regulon K04M5_18940 SM00448 cheY-homologous receiver domain K04M5_18970 SM00528 Domain in histone-like proteins of HNS family K04M5_18980 SM00344 helix_turn_helix ASNC type K04M5_19270 SM00091 PAS domain K04M5_19270 SM00382 ATPases associated with a variety of cellular activities K04M5_19330 SM00387 Histidine kinase-like ATPases K04M5_19330 SM00388 His Kinase A (phosphoacceptor) domain K04M5_19330 SM00448 cheY-homologous receiver domain K04M5_19380 SM00052 Putative diguanylate phosphodiesterase K04M5_19410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_19410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_19440 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_19490 SM00100 Cyclic nucleotide-monophosphate binding domain K04M5_19490 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_19500 SM00479 K04M5_19500 K04M5_19510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_19510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_19530 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_19540 SM00421 helix_turn_helix, Lux Regulon K04M5_19540 SM00448 cheY-homologous receiver domain K04M5_19550 SM00387 Histidine kinase-like ATPases K04M5_19550 SM01049 K04M5_19550 K04M5_19610 SM00849 Metallo-beta-lactamase superfamily K04M5_19790 SM00434 DNA Topoisomerase IV K04M5_19840 SM00852 Probable molybdopterin binding domain K04M5_19950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M5_19950 SM00465 GIY-YIG type nucleases (URI domain) K04M5_19960 SM00421 helix_turn_helix, Lux Regulon K04M5_19960 SM00448 cheY-homologous receiver domain K04M5_19970 SM00486 DNA polymerase type-B family K04M5_19990 SM00841 Elongation factor P, C-terminal K04M5_19990 SM01185 K04M5_19990 K04M5_20010 SM00363 S4 RNA-binding domain K04M5_20040 SM00481 DNA polymerase alpha chain like domain K04M5_20120 SM00100 Cyclic nucleotide-monophosphate binding domain K04M5_20120 SM00419 helix_turn_helix, cAMP Regulatory protein K04M5_20160 SM00387 Histidine kinase-like ATPases K04M5_20160 SM00388 His Kinase A (phosphoacceptor) domain K04M5_20160 SM00448 cheY-homologous receiver domain K04M5_20260 SM00052 Putative diguanylate phosphodiesterase K04M5_20260 SM00091 PAS domain K04M5_20270 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_20330 SM00448 cheY-homologous receiver domain K04M5_20330 SM00862 Transcriptional regulatory protein, C terminal K04M5_20340 SM00387 Histidine kinase-like ATPases K04M5_20340 SM00388 His Kinase A (phosphoacceptor) domain K04M5_20440 SM00382 ATPases associated with a variety of cellular activities K04M5_20560 SM00421 helix_turn_helix, Lux Regulon K04M5_20560 SM00448 cheY-homologous receiver domain K04M5_20570 SM00387 Histidine kinase-like ATPases K04M5_20570 SM00388 His Kinase A (phosphoacceptor) domain K04M5_20600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M5_20690 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family K04M5_20700 SM00028 Tetratricopeptide repeats K04M5_20720 SM00411 bacterial (prokaryotic) histone like domain K04M5_20730 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_20760 SM00822 K04M5_20760 K04M5_20790 SM00481 DNA polymerase alpha chain like domain K04M5_20800 SM00260 Two component signalling adaptor domain K04M5_20800 SM00448 cheY-homologous receiver domain K04M5_20950 SM00825 Beta-ketoacyl synthase K04M5_20970 SM00822 K04M5_20970 K04M5_20980 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. K04M5_21040 SM00363 S4 RNA-binding domain K04M5_21050 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_21070 SM00226 Low molecular weight phosphatase family K04M5_21160 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_21210 SM00267 diguanylate cyclase K04M5_21220 SM00642 Alpha-amylase domain K04M5_21230 SM00382 ATPases associated with a variety of cellular activities K04M5_21310 SM00382 ATPases associated with a variety of cellular activities K04M5_21320 SM00382 ATPases associated with a variety of cellular activities K04M5_21390 SM00852 Probable molybdopterin binding domain K04M5_21400 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_21430 SM00382 ATPases associated with a variety of cellular activities K04M5_21430 SM00448 cheY-homologous receiver domain K04M5_21440 SM00487 DEAD-like helicases superfamily K04M5_21440 SM00490 helicase superfamily c-terminal domain K04M5_21510 SM00900 K04M5_21510 K04M5_21530 SM00478 endonuclease III K04M5_21530 SM00525 K04M5_21530 K04M5_21570 SM00479 K04M5_21570 K04M5_21690 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M5_21800 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M5_21800 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M5_21800 SM00493 K04M5_21800 K04M5_21850 SM00870 K04M5_21850 K04M5_21890 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M5_21910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_21910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_21950 SM00098 Alkaline phosphatase homologues K04M5_22040 SM00493 K04M5_22040 K04M5_22060 SM00382 ATPases associated with a variety of cellular activities K04M5_22100 SM00448 cheY-homologous receiver domain K04M5_22190 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M5_22210 SM00825 Beta-ketoacyl synthase K04M5_22290 SM00463 Small MutS-related domain K04M5_22300 SM00855 Phosphoglycerate mutase family K04M5_22510 SM00382 ATPases associated with a variety of cellular activities K04M5_22530 SM00260 Two component signalling adaptor domain K04M5_22540 SM00260 Two component signalling adaptor domain K04M5_22560 SM00448 cheY-homologous receiver domain K04M5_22570 SM00073 Histidine Phosphotransfer domain K04M5_22570 SM00260 Two component signalling adaptor domain K04M5_22570 SM00387 Histidine kinase-like ATPases K04M5_22570 SM01231 K04M5_22570 K04M5_22590 SM00448 cheY-homologous receiver domain K04M5_22620 SM00382 ATPases associated with a variety of cellular activities K04M5_22620 SM00962 SRP54-type protein, GTPase domain K04M5_22750 SM00382 ATPases associated with a variety of cellular activities K04M5_22800 SM00382 ATPases associated with a variety of cellular activities K04M5_22800 SM00448 cheY-homologous receiver domain K04M5_22810 SM00387 Histidine kinase-like ATPases K04M5_22810 SM00388 His Kinase A (phosphoacceptor) domain K04M5_22820 SM00382 ATPases associated with a variety of cellular activities K04M5_23000 SM01130 K04M5_23000 K04M5_23080 SM00857 Resolvase, N terminal domain K04M5_23100 SM00382 ATPases associated with a variety of cellular activities K04M5_23250 SM00387 Histidine kinase-like ATPases K04M5_23250 SM00388 His Kinase A (phosphoacceptor) domain K04M5_23250 SM00448 cheY-homologous receiver domain K04M5_23290 SM00357 Cold shock protein domain K04M5_23340 SM00357 Cold shock protein domain K04M5_23360 SM00244 prohibitin homologues K04M5_23370 SM00244 prohibitin homologues K04M5_23400 SM00357 Cold shock protein domain K04M5_23460 SM00028 Tetratricopeptide repeats K04M5_23640 SM00479 K04M5_23640 K04M5_23670 SM00849 Metallo-beta-lactamase superfamily K04M5_23680 SM00257 Lysin motif K04M5_23710 SM00938 Nitrogen regulatory protein P-II K04M5_23730 SM00977 TilS substrate C-terminal domain K04M5_23750 SM00481 DNA polymerase alpha chain like domain K04M5_23810 SM00935 Outer membrane protein (OmpH-like) K04M5_23830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M5_23920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_24030 SM00849 Metallo-beta-lactamase superfamily K04M5_24150 SM00495 Chitin-binding domain type 3 K04M5_24150 SM00636 K04M5_24150 K04M5_24180 SM00487 DEAD-like helicases superfamily K04M5_24180 SM00490 helicase superfamily c-terminal domain K04M5_24360 SM00487 DEAD-like helicases superfamily K04M5_24530 SM00267 diguanylate cyclase K04M5_24530 SM00448 cheY-homologous receiver domain K04M5_24590 SM00900 K04M5_24590 K04M5_24700 SM00464 Found in ATP-dependent protease La (LON) K04M5_24750 SM00267 diguanylate cyclase K04M5_24780 SM00925 MltA specific insert domain K04M5_25070 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M5_25070 SM01134 K04M5_25070 K04M5_25130 SM00354 helix_turn _helix lactose operon repressor K04M5_25160 SM00421 helix_turn_helix, Lux Regulon K04M5_25250 SM00838 Elongation factor G C-terminus K04M5_25250 SM00889 Elongation factor G, domain IV K04M5_25260 SM00382 ATPases associated with a variety of cellular activities K04M5_25320 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain K04M5_25330 SM01133 K04M5_25330 K04M5_25430 SM00052 Putative diguanylate phosphodiesterase K04M5_25430 SM00091 PAS domain K04M5_25430 SM00267 diguanylate cyclase K04M5_25470 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_25480 SM00028 Tetratricopeptide repeats K04M5_25490 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_25490 SM00322 K homology RNA-binding domain K04M5_25500 SM01387 K04M5_25500 K04M5_25540 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_25610 SM00382 ATPases associated with a variety of cellular activities K04M5_25630 SM01103 K04M5_25630 K04M5_25680 SM00363 S4 RNA-binding domain K04M5_25760 SM00091 PAS domain K04M5_25760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_25760 SM00387 Histidine kinase-like ATPases K04M5_25760 SM00388 His Kinase A (phosphoacceptor) domain K04M5_25760 SM00448 cheY-homologous receiver domain K04M5_25800 SM00382 ATPases associated with a variety of cellular activities K04M5_25810 SM00382 ATPases associated with a variety of cellular activities K04M5_25850 SM01068 Putative carbohydrate binding domain K04M5_25870 SM00382 ATPases associated with a variety of cellular activities K04M5_25910 SM00938 Nitrogen regulatory protein P-II K04M5_25960 SM00487 DEAD-like helicases superfamily K04M5_25960 SM00490 helicase superfamily c-terminal domain K04M5_25960 SM00847 Helicase associated domain (HA2) Add an annotation K04M5_26060 SM00382 ATPases associated with a variety of cellular activities K04M5_26080 SM00947 Carbonic anhydrase K04M5_26140 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_26140 SM00895 K04M5_26140 K04M5_26150 SM00644 K04M5_26150 K04M5_26280 SM00382 ATPases associated with a variety of cellular activities K04M5_26280 SM00962 SRP54-type protein, GTPase domain K04M5_26280 SM00963 SRP54-type protein, helical bundle domain K04M5_26300 SM01091 Transporter associated domain K04M5_26360 SM00829 Enoylreductase K04M5_26520 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M5_26540 SM00382 ATPases associated with a variety of cellular activities K04M5_26560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family K04M5_26560 SM00534 ATPase domain of DNA mismatch repair MUTS family K04M5_26580 SM00257 Lysin motif K04M5_26650 SM01192 K04M5_26650 K04M5_26650 SM01193 K04M5_26650 K04M5_26690 SM00954 Region found in RelA / SpoT proteins K04M5_26710 SM00073 Histidine Phosphotransfer domain K04M5_26710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_26710 SM00387 Histidine kinase-like ATPases K04M5_26710 SM00388 His Kinase A (phosphoacceptor) domain K04M5_26710 SM00448 cheY-homologous receiver domain K04M5_26760 SM00358 Double-stranded RNA binding motif K04M5_26760 SM00535 Ribonuclease III family K04M5_26780 SM00838 Elongation factor G C-terminus K04M5_27030 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M5_27060 SM00861 Transketolase, pyrimidine binding domain K04M5_27090 SM00731 SprT homologues. K04M5_27140 SM00732 Likely ribonuclease with RNase H fold. K04M5_27160 SM00382 ATPases associated with a variety of cellular activities K04M5_27200 SM01152 K04M5_27200 K04M5_27230 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_27270 SM00478 endonuclease III K04M5_27270 SM00525 K04M5_27270 K04M5_27370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_27370 SM01049 K04M5_27370 K04M5_27520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_27530 SM00354 helix_turn _helix lactose operon repressor K04M5_27590 SM00495 Chitin-binding domain type 3 K04M5_27700 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_27790 SM00563 Phosphate acyltransferases K04M5_27860 SM00382 ATPases associated with a variety of cellular activities K04M5_27880 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_27910 SM00382 ATPases associated with a variety of cellular activities K04M5_27970 SM00924 MgtE intracellular N domain K04M5_28030 SM00487 DEAD-like helicases superfamily K04M5_28030 SM00490 helicase superfamily c-terminal domain K04M5_28040 SM00670 Large family of predicted nucleotide-binding domains K04M5_28080 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_28220 SM00382 ATPases associated with a variety of cellular activities K04M5_28230 SM00028 Tetratricopeptide repeats K04M5_28250 SM00965 Secretin and TonB N terminus short domain K04M5_28290 SM00052 Putative diguanylate phosphodiesterase K04M5_28290 SM00267 diguanylate cyclase K04M5_28310 SM00421 helix_turn_helix, Lux Regulon K04M5_28390 SM01018 B12 binding domain K04M5_28630 SM01005 Alanine racemase, C-terminal domain K04M5_28750 SM00965 Secretin and TonB N terminus short domain K04M5_28790 SM00842 Cell division protein FtsA K04M5_28890 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M5_28970 SM00919 Malic enzyme, NAD binding domain K04M5_28970 SM01274 K04M5_28970 K04M5_29010 SM00838 Elongation factor G C-terminus K04M5_29010 SM00889 Elongation factor G, domain IV K04M5_29090 SM00320 WD40 repeats K04M5_29160 SM00382 ATPases associated with a variety of cellular activities K04M5_29210 SM00100 Cyclic nucleotide-monophosphate binding domain K04M5_29210 SM00419 helix_turn_helix, cAMP Regulatory protein K04M5_29220 SM01150 K04M5_29220 K04M5_29310 SM00967 RNA 2'-O ribose methyltransferase substrate binding K04M5_29320 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_29320 SM00357 Cold shock protein domain K04M5_29320 SM00955 K04M5_29320 K04M5_29350 SM00671 Sel1-like repeats. K04M5_29360 SM00788 Adenylosuccinate synthetase K04M5_29380 SM00244 prohibitin homologues K04M5_29390 SM00244 prohibitin homologues K04M5_29430 SM00853 MutL C terminal dimerisation domain K04M5_29430 SM01340 K04M5_29430 K04M5_29440 SM00257 Lysin motif K04M5_29440 SM00646 K04M5_29440 K04M5_29600 SM00479 K04M5_29600 K04M5_29660 SM00450 Rhodanese Homology Domain K04M5_29690 SM00971 Serine acetyltransferase, N-terminal K04M5_29800 SM00841 Elongation factor P, C-terminal K04M5_29800 SM01185 K04M5_29800 K04M5_29850 SM00883 Chaperonin 10 Kd subunit K04M5_29900 SM00448 cheY-homologous receiver domain K04M5_29900 SM00862 Transcriptional regulatory protein, C terminal K04M5_29910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_29910 SM00387 Histidine kinase-like ATPases K04M5_29910 SM00388 His Kinase A (phosphoacceptor) domain K04M5_29980 SM00421 helix_turn_helix, Lux Regulon K04M5_29980 SM00448 cheY-homologous receiver domain K04M5_29990 SM01091 Transporter associated domain K04M5_30050 SM00387 Histidine kinase-like ATPases K04M5_30050 SM00388 His Kinase A (phosphoacceptor) domain K04M5_30050 SM00448 cheY-homologous receiver domain K04M5_30080 SM00479 K04M5_30080 K04M5_30120 SM00878 Biotin carboxylase C-terminal domain K04M5_30170 SM00382 ATPases associated with a variety of cellular activities K04M5_30290 SM00862 Transcriptional regulatory protein, C terminal K04M5_30300 SM00422 helix_turn_helix, mercury resistance K04M5_30310 SM00798 AICARFT/IMPCHase bienzyme K04M5_30310 SM00851 MGS-like domain K04M5_30320 SM01209 K04M5_30320 K04M5_30320 SM01210 K04M5_30320 K04M5_30340 SM00411 bacterial (prokaryotic) histone like domain K04M5_30350 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_30380 SM00986 Uracil DNA glycosylase superfamily K04M5_30380 SM00987 UreE urease accessory protein, C-terminal domain K04M5_30420 SM00663 RNA polymerase I subunit A N-terminus K04M5_30470 SM00649 Ribosomal protein L11/L12 K04M5_30480 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K04M5_30480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K04M5_30590 SM00155 Phospholipase D. Active site motifs. K04M5_30730 SM00360 RNA recognition motif K04M5_30840 SM00563 Phosphate acyltransferases K04M5_30890 SM00450 Rhodanese Homology Domain K04M5_30920 SM00382 ATPases associated with a variety of cellular activities K04M5_30930 SM00382 ATPases associated with a variety of cellular activities K04M5_30930 SM00962 SRP54-type protein, GTPase domain K04M5_30930 SM00963 SRP54-type protein, helical bundle domain K04M5_31040 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M5_31050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M5_31060 SM00052 Putative diguanylate phosphodiesterase K04M5_31120 SM01144 K04M5_31120 K04M5_31130 SM00052 Putative diguanylate phosphodiesterase K04M5_31130 SM00897 FIST N domain K04M5_31130 SM01204 K04M5_31130 K04M5_31190 SM01219 K04M5_31190 K04M5_31240 SM00028 Tetratricopeptide repeats K04M5_31360 SM00357 Cold shock protein domain K04M5_31360 SM00382 ATPases associated with a variety of cellular activities K04M5_31360 SM00959 Rho termination factor, N-terminal domain K04M5_31380 SM00487 DEAD-like helicases superfamily K04M5_31380 SM00490 helicase superfamily c-terminal domain K04M5_31430 SM00341 Helicase and RNase D C-terminal K04M5_31430 SM00487 DEAD-like helicases superfamily K04M5_31430 SM00490 helicase superfamily c-terminal domain K04M5_31430 SM00956 K04M5_31430 K04M5_31450 SM00342 helix_turn_helix, arabinose operon control protein K04M5_31570 SM00876 Biotin and Thiamin Synthesis associated domain K04M5_31790 SM01001 AIR carboxylase K04M5_31840 SM00257 Lysin motif K04M5_31980 SM00563 Phosphate acyltransferases K04M5_32000 SM00382 ATPases associated with a variety of cellular activities K04M5_32080 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_32130 SM00382 ATPases associated with a variety of cellular activities K04M5_32210 SM00470 ParB-like nuclease domain K04M5_32240 SM01228 K04M5_32240 K04M5_32300 SM00382 ATPases associated with a variety of cellular activities K04M5_32320 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_32320 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M5_32340 SM00470 ParB-like nuclease domain K04M5_32490 SM00382 ATPases associated with a variety of cellular activities K04M5_32500 SM00052 Putative diguanylate phosphodiesterase K04M5_32500 SM00267 diguanylate cyclase K04M5_32530 SM00448 cheY-homologous receiver domain K04M5_32540 SM00387 Histidine kinase-like ATPases K04M5_32560 SM00421 helix_turn_helix, Lux Regulon K04M5_32570 SM00342 helix_turn_helix, arabinose operon control protein K04M5_32620 SM00360 RNA recognition motif K04M5_32660 SM00344 helix_turn_helix ASNC type K04M5_32680 SM00382 ATPases associated with a variety of cellular activities K04M5_32700 SM00487 DEAD-like helicases superfamily K04M5_32700 SM00490 helicase superfamily c-terminal domain K04M5_32720 SM00342 helix_turn_helix, arabinose operon control protein K04M5_32730 SM00829 Enoylreductase K04M5_32890 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_32920 SM00342 helix_turn_helix, arabinose operon control protein K04M5_32920 SM00871 Bacterial transcription activator, effector binding domain K04M5_32930 SM00342 helix_turn_helix, arabinose operon control protein K04M5_32980 SM00382 ATPases associated with a variety of cellular activities K04M5_33030 SM00448 cheY-homologous receiver domain K04M5_33030 SM00862 Transcriptional regulatory protein, C terminal K04M5_33040 SM00387 Histidine kinase-like ATPases K04M5_33160 SM00382 ATPases associated with a variety of cellular activities K04M5_33170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_33170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_33240 SM00857 Resolvase, N terminal domain K04M5_33250 SM00354 helix_turn _helix lactose operon repressor K04M5_33320 SM00354 helix_turn _helix lactose operon repressor K04M5_33430 SM00642 Alpha-amylase domain K04M5_33470 SM00642 Alpha-amylase domain K04M5_33490 SM00642 Alpha-amylase domain K04M5_33500 SM00671 Sel1-like repeats. K04M5_33540 SM00966 SpoVT / AbrB like domain K04M5_33620 SM00421 helix_turn_helix, Lux Regulon K04M5_33650 SM00642 Alpha-amylase domain K04M5_33670 SM00642 Alpha-amylase domain K04M5_33790 SM00226 Low molecular weight phosphatase family K04M5_33860 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. K04M5_33890 SM00450 Rhodanese Homology Domain K04M5_33910 SM00936 Penicillin-binding protein 5, C-terminal domain K04M5_33920 SM00642 Alpha-amylase domain K04M5_33930 SM00342 helix_turn_helix, arabinose operon control protein K04M5_34150 SM00448 cheY-homologous receiver domain K04M5_34150 SM00862 Transcriptional regulatory protein, C terminal K04M5_34160 SM00387 Histidine kinase-like ATPases K04M5_34160 SM00388 His Kinase A (phosphoacceptor) domain K04M5_34470 SM00382 ATPases associated with a variety of cellular activities K04M5_34520 SM00382 ATPases associated with a variety of cellular activities K04M5_34540 SM00020 Trypsin-like serine protease K04M5_34580 SM00481 DNA polymerase alpha chain like domain K04M5_34660 SM00448 cheY-homologous receiver domain K04M5_34660 SM00862 Transcriptional regulatory protein, C terminal K04M5_34670 SM00388 His Kinase A (phosphoacceptor) domain K04M5_34700 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_34710 SM00052 Putative diguanylate phosphodiesterase K04M5_34710 SM00267 diguanylate cyclase K04M5_34730 SM00829 Enoylreductase K04M5_34740 SM00972 Spore Coat Protein U domain K04M5_34750 SM00972 Spore Coat Protein U domain K04M5_34780 SM00972 Spore Coat Protein U domain K04M5_34790 SM01057 Eukaryotic-type carbonic anhydrase K04M5_34860 SM00382 ATPases associated with a variety of cellular activities K04M5_34890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_34890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_34930 SM00587 ZnF_C4 abd HLH domain containing kinases domain K04M5_35000 SM00382 ATPases associated with a variety of cellular activities K04M5_35040 SM00267 diguanylate cyclase K04M5_35050 SM00028 Tetratricopeptide repeats K04M5_35090 SM00422 helix_turn_helix, mercury resistance K04M5_35110 SM00257 Lysin motif K04M5_35130 SM00487 DEAD-like helicases superfamily K04M5_35130 SM00490 helicase superfamily c-terminal domain K04M5_35190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_35190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_35230 SM00382 ATPases associated with a variety of cellular activities K04M5_35240 SM00267 diguanylate cyclase K04M5_35260 SM00327 von Willebrand factor (vWF) type A domain K04M5_35270 SM00327 von Willebrand factor (vWF) type A domain K04M5_35310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_35310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_35330 SM00421 helix_turn_helix, Lux Regulon K04M5_35340 SM00421 helix_turn_helix, Lux Regulon K04M5_35360 SM00382 ATPases associated with a variety of cellular activities K04M5_35410 SM00382 ATPases associated with a variety of cellular activities K04M5_35430 SM00382 ATPases associated with a variety of cellular activities K04M5_35440 SM00387 Histidine kinase-like ATPases K04M5_35440 SM00388 His Kinase A (phosphoacceptor) domain K04M5_35450 SM00448 cheY-homologous receiver domain K04M5_35450 SM00862 Transcriptional regulatory protein, C terminal K04M5_35640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_35640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_35680 SM00421 helix_turn_helix, Lux Regulon K04M5_35780 SM00382 ATPases associated with a variety of cellular activities K04M5_35800 SM00382 ATPases associated with a variety of cellular activities K04M5_35810 SM00387 Histidine kinase-like ATPases K04M5_35810 SM00388 His Kinase A (phosphoacceptor) domain K04M5_35820 SM00448 cheY-homologous receiver domain K04M5_35820 SM00862 Transcriptional regulatory protein, C terminal K04M5_35950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M5_35950 SM00382 ATPases associated with a variety of cellular activities K04M5_35960 SM00849 Metallo-beta-lactamase superfamily K04M5_36000 SM01060 K04M5_36000 K04M5_36020 SM00829 Enoylreductase K04M5_36040 SM01022 K04M5_36040 K04M5_36160 SM00382 ATPases associated with a variety of cellular activities K04M5_36230 SM00342 helix_turn_helix, arabinose operon control protein K04M5_36380 SM00382 ATPases associated with a variety of cellular activities K04M5_36440 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M5_36480 SM00260 Two component signalling adaptor domain K04M5_36480 SM00448 cheY-homologous receiver domain K04M5_36510 SM00382 ATPases associated with a variety of cellular activities K04M5_36520 SM00382 ATPases associated with a variety of cellular activities K04M5_36550 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M5_36550 SM01134 K04M5_36550 K04M5_36580 SM01007 Class II Aldolase and Adducin N-terminal domain K04M5_36640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_36640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_36710 SM00422 helix_turn_helix, mercury resistance K04M5_36720 SM00642 Alpha-amylase domain K04M5_36730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M5_36780 SM00382 ATPases associated with a variety of cellular activities K04M5_36870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M5_36870 SM00267 diguanylate cyclase K04M5_36940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M5_36970 SM00382 ATPases associated with a variety of cellular activities K04M5_37000 SM01119 K04M5_37000 K04M5_37110 SM00342 helix_turn_helix, arabinose operon control protein K04M5_37130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M5_37240 SM00530 Helix-turn-helix XRE-family like proteins K04M5_37280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_37280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_37340 SM00052 Putative diguanylate phosphodiesterase K04M5_37340 SM00267 diguanylate cyclase K04M5_37460 SM00342 helix_turn_helix, arabinose operon control protein K04M5_37630 SM01322 K04M5_37630 K04M5_37640 SM00357 Cold shock protein domain K04M5_37660 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_37660 SM00267 diguanylate cyclase K04M5_37690 SM00382 ATPases associated with a variety of cellular activities K04M5_37700 SM00382 ATPases associated with a variety of cellular activities K04M5_37720 SM00448 cheY-homologous receiver domain K04M5_37770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_37770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_37990 SM00487 DEAD-like helicases superfamily K04M5_37990 SM00490 helicase superfamily c-terminal domain K04M5_38030 SM00357 Cold shock protein domain K04M5_38070 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M5_38080 SM00487 DEAD-like helicases superfamily K04M5_38080 SM00490 helicase superfamily c-terminal domain K04M5_38120 SM00052 Putative diguanylate phosphodiesterase K04M5_38130 SM00382 ATPases associated with a variety of cellular activities K04M5_38140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_38190 SM00342 helix_turn_helix, arabinose operon control protein K04M5_38200 SM00316 Ribosomal protein S1-like RNA-binding domain K04M5_38200 SM00357 Cold shock protein domain K04M5_38200 SM00955 K04M5_38200 K04M5_38210 SM00487 DEAD-like helicases superfamily K04M5_38210 SM00490 helicase superfamily c-terminal domain K04M5_38290 SM00342 helix_turn_helix, arabinose operon control protein K04M5_38370 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M5_38380 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M5_38420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M5_38420 SM00091 PAS domain K04M5_38420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_38480 SM00422 helix_turn_helix, mercury resistance K04M5_38550 SM00822 K04M5_38550 K04M5_38720 SM00382 ATPases associated with a variety of cellular activities K04M5_38730 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_38730 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M5_38820 SM00893 Electron transfer flavoprotein domain K04M5_38840 SM00861 Transketolase, pyrimidine binding domain K04M5_38950 SM00448 cheY-homologous receiver domain K04M5_38950 SM00862 Transcriptional regulatory protein, C terminal K04M5_38960 SM00388 His Kinase A (phosphoacceptor) domain K04M5_38970 SM00871 Bacterial transcription activator, effector binding domain K04M5_39010 SM00028 Tetratricopeptide repeats K04M5_39010 SM00267 diguanylate cyclase K04M5_39050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M5_39090 SM01012 K04M5_39090 K04M5_39120 SM00382 ATPases associated with a variety of cellular activities K04M5_39190 SM00331 Sigma factor PP2C-like phosphatases K04M5_39190 SM00448 cheY-homologous receiver domain K04M5_39230 SM00220 Serine/Threonine protein kinases, catalytic domain K04M5_39240 SM00240 Forkhead associated domain K04M5_39300 SM00331 Sigma factor PP2C-like phosphatases K04M5_39300 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain K04M5_39390 SM00382 ATPases associated with a variety of cellular activities K04M5_39390 SM01086 C-terminal, D2-small domain, of ClpB protein K04M5_39530 SM00382 ATPases associated with a variety of cellular activities K04M5_39610 SM01005 Alanine racemase, C-terminal domain K04M5_39620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_39620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_39630 SM01311 K04M5_39630 K04M5_39670 SM00493 K04M5_39670 K04M5_39670 SM00778 Zinc-binding domain of primase-helicase K04M5_39680 SM00482 DNA polymerase A domain K04M5_40170 SM00642 Alpha-amylase domain K04M5_40200 SM00880 K04M5_40200 K04M5_40240 SM00267 diguanylate cyclase K04M5_40260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M5_40260 SM00267 diguanylate cyclase K04M5_40490 SM00387 Histidine kinase-like ATPases K04M5_40500 SM00421 helix_turn_helix, Lux Regulon K04M5_40500 SM00448 cheY-homologous receiver domain K04M5_40590 SM00450 Rhodanese Homology Domain K04M5_40600 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M5_40670 SM00342 helix_turn_helix, arabinose operon control protein K04M5_40750 SM00382 ATPases associated with a variety of cellular activities K04M5_40770 SM00267 diguanylate cyclase K04M5_40770 SM00448 cheY-homologous receiver domain K04M5_40780 SM00267 diguanylate cyclase K04M5_40810 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M5_40810 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M5_40830 SM00387 Histidine kinase-like ATPases K04M5_40830 SM00388 His Kinase A (phosphoacceptor) domain K04M5_40840 SM00448 cheY-homologous receiver domain K04M5_40840 SM00862 Transcriptional regulatory protein, C terminal K04M5_40940 SM00369 Leucine-rich repeats, typical (most populated) subfamily K04M5_41360 SM00881 CoA binding domain K04M5_41400 SM00091 PAS domain K04M5_41400 SM00267 diguanylate cyclase K04M5_41400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_41420 SM00796 Allophanate hydrolase subunit 1 K04M5_41430 SM00797 Allophanate hydrolase subunit 2 K04M5_41460 SM00382 ATPases associated with a variety of cellular activities K04M5_41490 SM00052 Putative diguanylate phosphodiesterase K04M5_41490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M5_41490 SM00267 diguanylate cyclase K04M5_41510 SM00271 DnaJ molecular chaperone homology domain K04M5_41640 SM00782 PhnA Zinc-Ribbon K04M5_41720 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M5_41730 SM00867 YceI-like domain K04M5_41770 SM00052 Putative diguanylate phosphodiesterase K04M5_41780 SM00487 DEAD-like helicases superfamily K04M5_41780 SM00490 helicase superfamily c-terminal domain K04M5_41810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_41880 SM00495 Chitin-binding domain type 3 K04M5_41880 SM00636 K04M5_41880 K04M5_41890 SM00342 helix_turn_helix, arabinose operon control protein K04M5_41920 SM00382 ATPases associated with a variety of cellular activities K04M5_41940 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_41940 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M5_41960 SM00052 Putative diguanylate phosphodiesterase K04M5_41990 SM00354 helix_turn _helix lactose operon repressor K04M5_42090 SM00530 Helix-turn-helix XRE-family like proteins K04M5_42140 SM00849 Metallo-beta-lactamase superfamily K04M5_42180 SM00342 helix_turn_helix, arabinose operon control protein K04M5_42230 SM00479 K04M5_42230 K04M5_42240 SM00382 ATPases associated with a variety of cellular activities K04M5_42300 SM00422 helix_turn_helix, mercury resistance K04M5_42370 SM00924 MgtE intracellular N domain K04M5_42450 SM00953 K04M5_42450 K04M5_42480 SM00704 CDGSH-type zinc finger. Function unknown. K04M5_42610 SM00260 Two component signalling adaptor domain K04M5_42610 SM00448 cheY-homologous receiver domain K04M5_42620 SM00421 helix_turn_helix, Lux Regulon K04M5_42620 SM00448 cheY-homologous receiver domain K04M5_42640 SM00267 diguanylate cyclase K04M5_42650 SM00421 helix_turn_helix, Lux Regulon K04M5_42650 SM00448 cheY-homologous receiver domain K04M5_42660 SM00052 Putative diguanylate phosphodiesterase K04M5_42660 SM00448 cheY-homologous receiver domain K04M5_42670 SM00062 Bacterial periplasmic substrate-binding proteins K04M5_42670 SM00387 Histidine kinase-like ATPases K04M5_42670 SM00388 His Kinase A (phosphoacceptor) domain K04M5_42670 SM00448 cheY-homologous receiver domain K04M5_42700 SM00387 Histidine kinase-like ATPases K04M5_42700 SM00448 cheY-homologous receiver domain K04M5_42770 SM00990 K04M5_42770 K04M5_42800 SM00046 Diacylglycerol kinase catalytic domain (presumed) K04M5_42840 SM00327 von Willebrand factor (vWF) type A domain K04M5_42850 SM00327 von Willebrand factor (vWF) type A domain K04M5_42930 SM00862 Transcriptional regulatory protein, C terminal K04M5_42960 SM00073 Histidine Phosphotransfer domain K04M5_42960 SM00387 Histidine kinase-like ATPases K04M5_42960 SM00388 His Kinase A (phosphoacceptor) domain K04M5_42960 SM00448 cheY-homologous receiver domain K04M5_42980 SM00851 MGS-like domain K04M5_43070 SM00342 helix_turn_helix, arabinose operon control protein K04M5_43080 SM00422 helix_turn_helix, mercury resistance K04M5_43090 SM00382 ATPases associated with a variety of cellular activities K04M5_43170 SM00354 helix_turn _helix lactose operon repressor K04M5_43210 SM00382 ATPases associated with a variety of cellular activities K04M5_43230 SM00052 Putative diguanylate phosphodiesterase K04M5_43230 SM00267 diguanylate cyclase K04M5_43330 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K04M5_43350 SM00387 Histidine kinase-like ATPases K04M5_43350 SM00388 His Kinase A (phosphoacceptor) domain K04M5_43350 SM00448 cheY-homologous receiver domain K04M5_43380 SM00244 prohibitin homologues K04M5_43410 SM00382 ATPases associated with a variety of cellular activities K04M5_43470 SM00028 Tetratricopeptide repeats K04M5_43470 SM00267 diguanylate cyclase K04M5_43480 SM00822 K04M5_43480 K04M5_43550 SM00422 helix_turn_helix, mercury resistance K04M5_43590 SM00878 Biotin carboxylase C-terminal domain K04M5_43630 SM01266 K04M5_43630 K04M5_43640 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_43770 SM00382 ATPases associated with a variety of cellular activities K04M5_43820 SM00382 ATPases associated with a variety of cellular activities K04M5_43840 SM00893 Electron transfer flavoprotein domain K04M5_43850 SM00893 Electron transfer flavoprotein domain K04M5_43890 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_43890 SM00866 K04M5_43890 K04M5_43980 SM00822 K04M5_43980 K04M5_43990 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_44000 SM00342 helix_turn_helix, arabinose operon control protein K04M5_44100 SM00240 Forkhead associated domain K04M5_44140 SM00344 helix_turn_helix ASNC type K04M5_44210 SM00220 Serine/Threonine protein kinases, catalytic domain K04M5_44280 SM00382 ATPases associated with a variety of cellular activities K04M5_44280 SM01086 C-terminal, D2-small domain, of ClpB protein K04M5_44290 SM00382 ATPases associated with a variety of cellular activities K04M5_44370 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_44380 SM00736 Dystroglycan-type cadherin-like domains. K04M5_44430 SM00028 Tetratricopeptide repeats K04M5_44430 SM00530 Helix-turn-helix XRE-family like proteins K04M5_44480 SM01240 K04M5_44480 K04M5_44510 SM00448 cheY-homologous receiver domain K04M5_44580 SM00852 Probable molybdopterin binding domain K04M5_44620 SM00450 Rhodanese Homology Domain K04M5_44650 SM00861 Transketolase, pyrimidine binding domain K04M5_44660 SM00091 PAS domain K04M5_44660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_44720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_44790 SM00421 helix_turn_helix, Lux Regulon K04M5_44790 SM00448 cheY-homologous receiver domain K04M5_44800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_44800 SM00387 Histidine kinase-like ATPases K04M5_44830 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M5_44900 SM00822 K04M5_44900 K04M5_44990 SM00344 helix_turn_helix ASNC type K04M5_45040 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M5_45050 SM00387 Histidine kinase-like ATPases K04M5_45050 SM00388 His Kinase A (phosphoacceptor) domain K04M5_45050 SM00448 cheY-homologous receiver domain K04M5_45070 SM00465 GIY-YIG type nucleases (URI domain) K04M5_45120 SM00387 Histidine kinase-like ATPases K04M5_45120 SM00388 His Kinase A (phosphoacceptor) domain K04M5_45120 SM00448 cheY-homologous receiver domain K04M5_45130 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M5_45190 SM00344 helix_turn_helix ASNC type K04M5_45210 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_45230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_45230 SM00387 Histidine kinase-like ATPases K04M5_45230 SM00388 His Kinase A (phosphoacceptor) domain K04M5_45240 SM00448 cheY-homologous receiver domain K04M5_45240 SM00862 Transcriptional regulatory protein, C terminal K04M5_45270 SM00342 helix_turn_helix, arabinose operon control protein K04M5_45310 SM00924 MgtE intracellular N domain K04M5_45340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M5_45350 SM00530 Helix-turn-helix XRE-family like proteins K04M5_45360 SM00563 Phosphate acyltransferases K04M5_45450 SM00448 cheY-homologous receiver domain K04M5_45450 SM00862 Transcriptional regulatory protein, C terminal K04M5_45460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_45460 SM00387 Histidine kinase-like ATPases K04M5_45460 SM00388 His Kinase A (phosphoacceptor) domain K04M5_45550 SM00357 Cold shock protein domain K04M5_45610 SM00936 Penicillin-binding protein 5, C-terminal domain K04M5_45640 SM00640 Glycosyl hydrolases family 32 K04M5_45670 SM00354 helix_turn _helix lactose operon repressor K04M5_45700 SM00822 K04M5_45700 K04M5_45780 SM00342 helix_turn_helix, arabinose operon control protein K04M5_45780 SM00871 Bacterial transcription activator, effector binding domain K04M5_45830 SM00487 DEAD-like helicases superfamily K04M5_45830 SM00490 helicase superfamily c-terminal domain K04M5_45890 SM00829 Enoylreductase K04M5_45920 SM00342 helix_turn_helix, arabinose operon control protein K04M5_45930 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_45960 SM00344 helix_turn_helix ASNC type K04M5_46030 SM00788 Adenylosuccinate synthetase K04M5_46040 SM00870 K04M5_46040 K04M5_46080 SM00421 helix_turn_helix, Lux Regulon K04M5_46150 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_46150 SM00866 K04M5_46150 K04M5_46200 SM00382 ATPases associated with a variety of cellular activities K04M5_46300 SM00155 Phospholipase D. Active site motifs. K04M5_46320 SM01022 K04M5_46320 K04M5_46330 SM00028 Tetratricopeptide repeats K04M5_46350 SM00422 helix_turn_helix, mercury resistance K04M5_46390 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K04M5_46400 SM00838 Elongation factor G C-terminus K04M5_46400 SM00889 Elongation factor G, domain IV K04M5_46470 SM00382 ATPases associated with a variety of cellular activities K04M5_46620 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M5_46620 SM01134 K04M5_46620 K04M5_46680 SM00342 helix_turn_helix, arabinose operon control protein K04M5_46760 SM00883 Chaperonin 10 Kd subunit K04M5_46770 SM00450 Rhodanese Homology Domain K04M5_46800 SM01240 K04M5_46800 K04M5_46950 SM00858 K04M5_46950 K04M5_47080 SM00631 K04M5_47080 K04M5_47140 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_47140 SM00866 K04M5_47140 K04M5_47160 SM00382 ATPases associated with a variety of cellular activities K04M5_47220 SM00354 helix_turn _helix lactose operon repressor K04M5_47320 SM00382 ATPases associated with a variety of cellular activities K04M5_47350 SM01057 Eukaryotic-type carbonic anhydrase K04M5_47460 SM01266 K04M5_47460 K04M5_47520 SM00267 diguanylate cyclase K04M5_47540 SM00530 Helix-turn-helix XRE-family like proteins K04M5_47550 SM00267 diguanylate cyclase K04M5_47550 SM01079 K04M5_47550 K04M5_47740 SM00267 diguanylate cyclase K04M5_47750 SM00382 ATPases associated with a variety of cellular activities K04M5_47750 SM00448 cheY-homologous receiver domain K04M5_47760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M5_47760 SM00387 Histidine kinase-like ATPases K04M5_47860 SM00849 Metallo-beta-lactamase superfamily K04M5_47940 SM00382 ATPases associated with a variety of cellular activities K04M5_48080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_48080 SM00387 Histidine kinase-like ATPases K04M5_48080 SM00388 His Kinase A (phosphoacceptor) domain K04M5_48090 SM00448 cheY-homologous receiver domain K04M5_48090 SM00862 Transcriptional regulatory protein, C terminal K04M5_48280 SM00382 ATPases associated with a variety of cellular activities K04M5_48340 SM00014 Acid phosphatase homologues K04M5_48380 SM00822 K04M5_48380 K04M5_48450 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_48660 SM00495 Chitin-binding domain type 3 K04M5_48670 SM00344 helix_turn_helix ASNC type K04M5_48720 SM00829 Enoylreductase K04M5_48770 SM00267 diguanylate cyclase K04M5_48810 SM00849 Metallo-beta-lactamase superfamily K04M5_48850 SM00267 diguanylate cyclase K04M5_48890 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K04M5_48890 SM00495 Chitin-binding domain type 3 K04M5_48890 SM00636 K04M5_48890 K04M5_48990 SM00342 helix_turn_helix, arabinose operon control protein K04M5_48990 SM01009 AlkA N-terminal domain K04M5_49090 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M5_49100 SM00382 ATPases associated with a variety of cellular activities K04M5_49150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M5_49150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M5_49150 SM01049 K04M5_49150 K04M5_49180 SM00448 cheY-homologous receiver domain K04M5_49180 SM00850 LytTr DNA-binding domain K04M5_49190 SM00387 Histidine kinase-like ATPases K04M5_49230 SM00382 ATPases associated with a variety of cellular activities K04M5_49280 SM00387 Histidine kinase-like ATPases K04M5_49280 SM00388 His Kinase A (phosphoacceptor) domain K04M5_49280 SM00448 cheY-homologous receiver domain K04M5_49320 SM00382 ATPases associated with a variety of cellular activities K04M5_49330 SM00382 ATPases associated with a variety of cellular activities K04M5_50510 SM00400 zinc finger K04M5_50740 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M5_50740 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M5_50740 SM00493 K04M5_50740 K04M5_50950 SM00382 ATPases associated with a variety of cellular activities K04M5_51240 SM00528 Domain in histone-like proteins of HNS family K04M5_51270 SM00477 DNA/RNA non-specific endonuclease K04M5_51270 SM00892 DNA/RNA non-specific endonuclease K04M5_51320 SM00052 Putative diguanylate phosphodiesterase K04M5_51320 SM00267 diguanylate cyclase K04M5_51670 SM00974 K04M5_51670 K04M5_51790 SM00244 prohibitin homologues K04M5_51800 SM00244 prohibitin homologues K04M5_51910 SM00052 Putative diguanylate phosphodiesterase K04M5_51910 SM00267 diguanylate cyclase K04M5_52130 SM00493 K04M5_52130 K04M5_52220 SM00479 K04M5_52220