K08M4_00010 PF00308 Bacterial dnaA protein K08M4_00010 PF08299 Bacterial dnaA protein helix-turn-helix K08M4_00010 PF11638 DnaA N-terminal domain K08M4_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain K08M4_00020 PF02767 DNA polymerase III beta subunit, central domain K08M4_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain K08M4_00030 PF02463 RecF/RecN/SMC N terminal domain K08M4_00040 PF00204 DNA gyrase B K08M4_00040 PF00986 DNA gyrase B subunit, carboxyl terminus K08M4_00040 PF01751 Toprim domain K08M4_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_00050 PF00011 Hsp20/alpha crystallin family K08M4_00060 PF00155 Aminotransferase class I and II K08M4_00070 PF02092 K08M4_00070 K08M4_00070 PF05746 DALR anticodon binding domain K08M4_00080 PF02091 Glycyl-tRNA synthetase alpha subunit K08M4_00090 PF01169 K08M4_00090 K08M4_00110 PF01206 Sulfurtransferase TusA K08M4_00130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_00130 PF03466 LysR substrate binding domain K08M4_00140 PF00107 Zinc-binding dehydrogenase K08M4_00150 PF00108 Thiolase, N-terminal domain K08M4_00150 PF02803 Thiolase, C-terminal domain K08M4_00160 PF00378 Enoyl-CoA hydratase/isomerase family K08M4_00160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K08M4_00160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K08M4_00170 PF01205 Uncharacterized protein family UPF0029 K08M4_00170 PF09186 Domain of unknown function (DUF1949) K08M4_00180 PF02386 Cation transport protein K08M4_00190 PF12724 Flavodoxin domain K08M4_00280 PF13358 DDE superfamily endonuclease K08M4_00290 PF13551 Winged helix-turn helix K08M4_00290 PF13592 K08M4_00290 K08M4_00300 PF00394 Multicopper oxidase K08M4_00300 PF07731 Multicopper oxidase K08M4_00300 PF07732 Multicopper oxidase K08M4_00310 PF02537 K08M4_00310 K08M4_00330 PF01964 ThiC family K08M4_00330 PF13667 ThiC-associated domain K08M4_00340 PF02581 Thiamine monophosphate synthase/TENI K08M4_00350 PF00899 ThiF family K08M4_00360 PF02597 ThiS family K08M4_00370 PF05690 Thiazole biosynthesis protein ThiG K08M4_00380 PF04055 Radical SAM superfamily K08M4_00380 PF06968 Biotin and Thiamin Synthesis associated domain K08M4_00390 PF00557 Metallopeptidase family M24 K08M4_00390 PF01321 Creatinase/Prolidase N-terminal domain K08M4_00390 PF16188 K08M4_00390 K08M4_00390 PF16189 K08M4_00390 K08M4_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_00400 PF03466 LysR substrate binding domain K08M4_00410 PF07690 Major Facilitator Superfamily K08M4_00430 PF07681 K08M4_00430 K08M4_00440 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) K08M4_00450 PF05114 Protein of unknown function (DUF692) K08M4_00460 PF10048 K08M4_00460 K08M4_00470 PF00580 UvrD/REP helicase N-terminal domain K08M4_00470 PF13361 UvrD-like helicase C-terminal domain K08M4_00480 PF08534 Redoxin K08M4_00490 PF01019 Gamma-glutamyltranspeptidase K08M4_00500 PF01810 K08M4_00500 K08M4_00510 PF02311 AraC-like ligand binding domain K08M4_00510 PF12833 Helix-turn-helix domain K08M4_00520 PF00892 EamA-like transporter family K08M4_00530 PF00270 DEAD/DEAH box helicase K08M4_00530 PF00271 Helicase conserved C-terminal domain K08M4_00530 PF00570 HRDC domain K08M4_00530 PF09382 RQC domain K08M4_00530 PF16124 K08M4_00530 K08M4_00540 PF12305 K08M4_00540 K08M4_00550 PF02592 K08M4_00550 K08M4_00560 PF02541 Ppx/GppA phosphatase family K08M4_00570 PF00270 DEAD/DEAH box helicase K08M4_00570 PF00271 Helicase conserved C-terminal domain K08M4_00580 PF00085 Thioredoxin K08M4_00590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_00590 PF07497 Rho termination factor, RNA-binding domain K08M4_00590 PF07498 Rho termination factor, N-terminal domain K08M4_00610 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K08M4_00620 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_00630 PF00175 Oxidoreductase NAD-binding domain K08M4_00730 PF13358 DDE superfamily endonuclease K08M4_00740 PF13551 Winged helix-turn helix K08M4_00740 PF13592 K08M4_00740 K08M4_00760 PF13551 Winged helix-turn helix K08M4_00760 PF13592 K08M4_00760 K08M4_00770 PF07219 K08M4_00770 K08M4_00780 PF04375 K08M4_00780 K08M4_00790 PF02602 Uroporphyrinogen-III synthase HemD K08M4_00800 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain K08M4_00800 PF03900 Porphobilinogen deaminase, C-terminal domain K08M4_00810 PF01295 K08M4_00810 K08M4_00810 PF12633 K08M4_00810 K08M4_00820 PF01491 Frataxin-like domain K08M4_00830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K08M4_00830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M4_00840 PF01678 Diaminopimelate epimerase K08M4_00850 PF04340 Protein of unknown function, DUF484 K08M4_00860 PF00589 Phage integrase family K08M4_00860 PF02899 Phage integrase, N-terminal SAM-like domain K08M4_00870 PF13419 Haloacid dehalogenase-like hydrolase K08M4_00880 PF00563 EAL domain K08M4_00880 PF00990 GGDEF domain K08M4_00880 PF08495 K08M4_00880 K08M4_00880 PF10442 K08M4_00880 K08M4_00890 PF00563 EAL domain K08M4_00890 PF00990 GGDEF domain K08M4_00890 PF08495 K08M4_00890 K08M4_00890 PF10442 K08M4_00890 K08M4_00900 PF03942 K08M4_00900 K08M4_00920 PF01878 EVE domain K08M4_00930 PF08282 haloacid dehalogenase-like hydrolase K08M4_00940 PF12146 Putative lysophospholipase K08M4_00950 PF01810 K08M4_00950 K08M4_00960 PF00563 EAL domain K08M4_00960 PF08668 HDOD domain K08M4_00970 PF01022 Bacterial regulatory protein, arsR family K08M4_00980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_00980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_00990 PF00782 Dual specificity phosphatase, catalytic domain K08M4_01000 PF07690 Major Facilitator Superfamily K08M4_01010 PF01757 K08M4_01010 K08M4_01020 PF10694 Protein of unknown function (DUF2500) K08M4_01040 PF07947 K08M4_01040 K08M4_01050 PF10678 K08M4_01050 K08M4_01060 PF01914 K08M4_01060 K08M4_01070 PF06611 K08M4_01070 K08M4_01080 PF03602 Conserved hypothetical protein 95 K08M4_01090 PF00448 SRP54-type protein, GTPase domain K08M4_01090 PF02881 SRP54-type protein, helical bundle domain K08M4_01100 PF00005 ABC transporter K08M4_01120 PF00140 Sigma-70 factor, region 1 K08M4_01120 PF04542 Sigma-70 region 2 K08M4_01120 PF04545 Sigma-70, region 4 K08M4_01130 PF00581 Rhodanese-like domain K08M4_01140 PF01694 Rhomboid family K08M4_01140 PF12122 Protein of unknown function (DUF3582) K08M4_01150 PF03748 K08M4_01150 K08M4_01160 PF04345 Chorismate lyase K08M4_01170 PF01040 UbiA prenyltransferase family K08M4_01180 PF01553 Acyltransferase K08M4_01190 PF01219 Prokaryotic diacylglycerol kinase K08M4_01200 PF00717 Peptidase S24-like K08M4_01200 PF01726 LexA DNA binding domain K08M4_01210 PF04072 Leucine carboxyl methyltransferase K08M4_01220 PF01554 MatE K08M4_01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_01240 PF00440 Bacterial regulatory proteins, tetR family K08M4_01250 PF07226 K08M4_01250 K08M4_01260 PF05958 tRNA (Uracil-5-)-methyltransferase K08M4_01270 PF00593 TonB dependent receptor K08M4_01270 PF07715 TonB-dependent Receptor Plug Domain K08M4_01280 PF01902 ATP-binding region K08M4_01290 PF01177 Asp/Glu/Hydantoin racemase K08M4_01300 PF00076 RNA recognition motif K08M4_01420 PF13358 DDE superfamily endonuclease K08M4_01430 PF13551 Winged helix-turn helix K08M4_01430 PF13592 K08M4_01430 K08M4_01440 PF13358 DDE superfamily endonuclease K08M4_01450 PF13091 PLD-like domain K08M4_01460 PF13508 Acetyltransferase (GNAT) domain K08M4_01470 PF01565 FAD binding domain K08M4_01470 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K08M4_01480 PF02237 Biotin protein ligase C terminal domain K08M4_01480 PF03099 Biotin/lipoate A/B protein ligase family K08M4_01480 PF08279 HTH domain K08M4_01490 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_01540 PF00009 Elongation factor Tu GTP binding domain K08M4_01540 PF03143 Elongation factor Tu C-terminal domain K08M4_01540 PF03144 Elongation factor Tu domain 2 K08M4_01550 PF00584 SecE/Sec61-gamma subunits of protein translocation complex K08M4_01560 PF00467 KOW motif K08M4_01560 PF02357 Transcription termination factor nusG K08M4_01570 PF00298 Ribosomal protein L11, RNA binding domain K08M4_01570 PF03946 Ribosomal protein L11, N-terminal domain K08M4_01580 PF00687 Ribosomal protein L1p/L10e family K08M4_01590 PF00466 Ribosomal protein L10 K08M4_01600 PF00542 Ribosomal protein L7/L12 C-terminal domain K08M4_01600 PF16320 K08M4_01600 K08M4_01610 PF00562 RNA polymerase Rpb2, domain 6 K08M4_01610 PF04560 RNA polymerase Rpb2, domain 7 K08M4_01610 PF04561 RNA polymerase Rpb2, domain 2 K08M4_01610 PF04563 RNA polymerase beta subunit K08M4_01610 PF04565 RNA polymerase Rpb2, domain 3 K08M4_01610 PF10385 RNA polymerase beta subunit external 1 domain K08M4_01620 PF00623 RNA polymerase Rpb1, domain 2 K08M4_01620 PF04983 RNA polymerase Rpb1, domain 3 K08M4_01620 PF04997 RNA polymerase Rpb1, domain 1 K08M4_01620 PF04998 RNA polymerase Rpb1, domain 5 K08M4_01620 PF05000 RNA polymerase Rpb1, domain 4 K08M4_01630 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ K08M4_01640 PF00293 NUDIX domain K08M4_01640 PF09297 NADH pyrophosphatase zinc ribbon domain K08M4_01650 PF01208 Uroporphyrinogen decarboxylase (URO-D) K08M4_01660 PF03167 Uracil DNA glycosylase superfamily K08M4_01670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_01680 PF04222 Protein of unknown function (DUF416) K08M4_01690 PF00571 CBS domain K08M4_01690 PF01595 K08M4_01690 K08M4_01700 PF00216 Bacterial DNA-binding protein K08M4_01710 PF07356 K08M4_01710 K08M4_01720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K08M4_01720 PF02843 Phosphoribosylglycinamide synthetase, C domain K08M4_01720 PF02844 Phosphoribosylglycinamide synthetase, N domain K08M4_01730 PF01808 AICARFT/IMPCHase bienzyme K08M4_01730 PF02142 MGS-like domain K08M4_01740 PF00376 MerR family regulatory protein K08M4_01740 PF09278 MerR, DNA binding K08M4_01750 PF00990 GGDEF domain K08M4_01760 PF02954 Bacterial regulatory protein, Fis family K08M4_01770 PF01207 Dihydrouridine synthase (Dus) K08M4_01780 PF06325 Ribosomal protein L11 methyltransferase (PrmA) K08M4_01790 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain K08M4_01790 PF02785 Biotin carboxylase C-terminal domain K08M4_01790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M4_01800 PF00364 Biotin-requiring enzyme K08M4_01810 PF01220 Dehydroquinase class II K08M4_01820 PF00501 AMP-binding enzyme K08M4_01820 PF13193 AMP-binding enzyme C-terminal domain K08M4_01820 PF16177 K08M4_01820 K08M4_01830 PF00929 Exonuclease K08M4_01840 PF00027 Cyclic nucleotide-binding domain K08M4_01840 PF00571 CBS domain K08M4_01840 PF03445 K08M4_01840 K08M4_01840 PF10335 K08M4_01840 K08M4_01850 PF12832 MFS_1 like family K08M4_01860 PF00072 Response regulator receiver domain K08M4_01860 PF00512 His Kinase A (phospho-acceptor) domain K08M4_01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_01860 PF12860 K08M4_01860 K08M4_01870 PF00206 Lyase K08M4_01870 PF10415 Fumarase C C-terminus K08M4_01890 PF00474 Sodium:solute symporter family K08M4_01900 PF13937 K08M4_01900 K08M4_01910 PF00999 Sodium/hydrogen exchanger family K08M4_01910 PF02080 TrkA-C domain K08M4_01910 PF03471 Transporter associated domain K08M4_01920 PF00072 Response regulator receiver domain K08M4_01920 PF00196 Bacterial regulatory proteins, luxR family K08M4_01930 PF02683 K08M4_01930 K08M4_01930 PF11412 Disulphide bond corrector protein DsbC K08M4_01930 PF13899 Thioredoxin-like K08M4_01940 PF01316 Arginine repressor, DNA binding domain K08M4_01940 PF02863 Arginine repressor, C-terminal domain K08M4_01950 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K08M4_01950 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K08M4_01960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_01960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_01970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_01970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_01980 PF00696 Amino acid kinase family K08M4_01990 PF02274 Amidinotransferase K08M4_02000 PF03606 K08M4_02000 K08M4_02010 PF03605 K08M4_02010 K08M4_02020 PF00206 Lyase K08M4_02020 PF10415 Fumarase C C-terminus K08M4_02030 PF04186 K08M4_02030 K08M4_02040 PF00588 SpoU rRNA Methylase family K08M4_02050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K08M4_02050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K08M4_02060 PF00512 His Kinase A (phospho-acceptor) domain K08M4_02060 PF00672 HAMP domain K08M4_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_02060 PF16527 K08M4_02060 K08M4_02070 PF00072 Response regulator receiver domain K08M4_02070 PF00486 Transcriptional regulatory protein, C terminal K08M4_02080 PF07813 LTXXQ motif family protein K08M4_02090 PF01545 Cation efflux family K08M4_02090 PF16916 K08M4_02090 K08M4_02100 PF00365 Phosphofructokinase K08M4_02110 PF00121 Triosephosphate isomerase K08M4_02120 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase K08M4_02130 PF05656 K08M4_02130 K08M4_02140 PF11333 K08M4_02140 K08M4_02150 PF08220 DeoR-like helix-turn-helix domain K08M4_02160 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K08M4_02170 PF06005 Protein of unknown function (DUF904) K08M4_02180 PF03737 Demethylmenaquinone methyltransferase K08M4_02190 PF01040 UbiA prenyltransferase family K08M4_02200 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_02200 PF07724 AAA domain (Cdc48 subfamily) K08M4_02200 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_02210 PF00227 Proteasome subunit K08M4_02220 PF05036 Sporulation related domain K08M4_02230 PF00356 Bacterial regulatory proteins, lacI family K08M4_02230 PF13377 Periplasmic binding protein-like domain K08M4_02240 PF00270 DEAD/DEAH box helicase K08M4_02240 PF00271 Helicase conserved C-terminal domain K08M4_02250 PF01197 Ribosomal protein L31 K08M4_02260 PF00390 Malic enzyme, N-terminal domain K08M4_02260 PF03949 Malic enzyme, NAD binding domain K08M4_02270 PF01340 Met Apo-repressor, MetJ K08M4_02280 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M4_02290 PF00696 Amino acid kinase family K08M4_02290 PF00742 Homoserine dehydrogenase K08M4_02290 PF03447 Homoserine dehydrogenase, NAD binding domain K08M4_02300 PF02219 Methylenetetrahydrofolate reductase K08M4_02310 PF03551 Transcriptional regulator PadR-like family K08M4_02310 PF10400 Virulence activator alpha C-term K08M4_02320 PF00311 Phosphoenolpyruvate carboxylase K08M4_02330 PF01546 Peptidase family M20/M25/M40 K08M4_02330 PF07687 Peptidase dimerisation domain K08M4_02340 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M4_02340 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M4_02350 PF00696 Amino acid kinase family K08M4_02360 PF00764 Arginosuccinate synthase K08M4_02370 PF00206 Lyase K08M4_02370 PF00583 Acetyltransferase (GNAT) family K08M4_02370 PF14698 Argininosuccinate lyase C-terminal K08M4_02380 PF01042 Endoribonuclease L-PSP K08M4_02390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_02390 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_02400 PF00462 Glutaredoxin K08M4_02400 PF08534 Redoxin K08M4_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_02410 PF03466 LysR substrate binding domain K08M4_02420 PF00905 Penicillin binding protein transpeptidase domain K08M4_02420 PF00912 Transglycosylase K08M4_02420 PF17092 K08M4_02420 K08M4_02430 PF11104 Type IV pilus assembly protein PilM; K08M4_02440 PF05137 K08M4_02440 K08M4_02450 PF04350 Pilus assembly protein, PilO K08M4_02460 PF04351 Pilus assembly protein, PilP K08M4_02470 PF00263 K08M4_02470 K08M4_02470 PF03958 Bacterial type II/III secretion system short domain K08M4_02480 PF01202 Shikimate kinase K08M4_02490 PF01761 3-dehydroquinate synthase K08M4_02500 PF13401 AAA domain K08M4_02510 PF02086 D12 class N6 adenine-specific DNA methyltransferase K08M4_02520 PF00834 Ribulose-phosphate 3 epimerase family K08M4_02530 PF13419 Haloacid dehalogenase-like hydrolase K08M4_02540 PF00579 tRNA synthetases class I (W and Y) K08M4_02550 PF00932 Lamin Tail Domain K08M4_02560 PF00563 EAL domain K08M4_02560 PF00990 GGDEF domain K08M4_02560 PF08269 Cache domain K08M4_02570 PF00117 Glutamine amidotransferase class-I K08M4_02580 PF00202 Aminotransferase class-III K08M4_02590 PF04958 Arginine N-succinyltransferase beta subunit K08M4_02600 PF00171 Aldehyde dehydrogenase family K08M4_02610 PF07063 Domain of unknown function (DUF1338) K08M4_02620 PF00027 Cyclic nucleotide-binding domain K08M4_02620 PF00325 Bacterial regulatory proteins, crp family K08M4_02630 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_02640 PF06794 Uncharacterised protein family (UPF0270) K08M4_02650 PF00561 alpha/beta hydrolase fold K08M4_02660 PF09523 K08M4_02660 K08M4_02670 PF00005 ABC transporter K08M4_02670 PF12848 ABC transporter K08M4_02680 PF02525 Flavodoxin-like fold K08M4_02690 PF00999 Sodium/hydrogen exchanger family K08M4_02690 PF02254 TrkA-N domain K08M4_02700 PF09526 K08M4_02700 K08M4_02710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_02720 PF01112 Asparaginase K08M4_02730 PF04102 SlyX K08M4_02740 PF00400 WD domain, G-beta repeat K08M4_02750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_02750 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M4_02760 PF08348 K08M4_02760 K08M4_02760 PF13309 K08M4_02760 K08M4_02770 PF02635 DsrE/DsrF-like family K08M4_02780 PF02635 DsrE/DsrF-like family K08M4_02790 PF04077 DsrH like protein K08M4_02800 PF00164 Ribosomal protein S12/S23 K08M4_02810 PF00177 Ribosomal protein S7p/S5e K08M4_02820 PF00009 Elongation factor Tu GTP binding domain K08M4_02820 PF00679 Elongation factor G C-terminus K08M4_02820 PF03144 Elongation factor Tu domain 2 K08M4_02820 PF03764 Elongation factor G, domain IV K08M4_02820 PF14492 Elongation Factor G, domain II K08M4_02830 PF00009 Elongation factor Tu GTP binding domain K08M4_02830 PF03143 Elongation factor Tu C-terminal domain K08M4_02830 PF03144 Elongation factor Tu domain 2 K08M4_02840 PF00338 Ribosomal protein S10p/S20e K08M4_02850 PF00297 Ribosomal protein L3 K08M4_02860 PF00573 Ribosomal protein L4/L1 family K08M4_02870 PF00276 Ribosomal protein L23 K08M4_02880 PF00181 Ribosomal Proteins L2, RNA binding domain K08M4_02880 PF03947 Ribosomal Proteins L2, C-terminal domain K08M4_02890 PF00203 Ribosomal protein S19 K08M4_02900 PF00237 Ribosomal protein L22p/L17e K08M4_02910 PF00189 Ribosomal protein S3, C-terminal domain K08M4_02910 PF07650 KH domain K08M4_02920 PF00252 Ribosomal protein L16p/L10e K08M4_02930 PF00831 Ribosomal L29 protein K08M4_02940 PF00366 Ribosomal protein S17 K08M4_02950 PF00238 Ribosomal protein L14p/L23e K08M4_02960 PF00467 KOW motif K08M4_02960 PF17136 K08M4_02960 K08M4_02970 PF00281 Ribosomal protein L5 K08M4_02970 PF00673 ribosomal L5P family C-terminus K08M4_02980 PF00253 Ribosomal protein S14p/S29e K08M4_02990 PF00410 Ribosomal protein S8 K08M4_03000 PF00347 Ribosomal protein L6 K08M4_03010 PF00861 Ribosomal L18p/L5e family K08M4_03020 PF00333 Ribosomal protein S5, N-terminal domain K08M4_03020 PF03719 Ribosomal protein S5, C-terminal domain K08M4_03030 PF00327 Ribosomal protein L30p/L7e K08M4_03040 PF00828 Ribosomal protein L18e/L15 K08M4_03050 PF00344 SecY translocase K08M4_03060 PF00444 Ribosomal protein L36 K08M4_03070 PF00416 Ribosomal protein S13/S18 K08M4_03080 PF00411 Ribosomal protein S11 K08M4_03090 PF00163 Ribosomal protein S4/S9 N-terminal domain K08M4_03090 PF01479 S4 domain K08M4_03100 PF01000 RNA polymerase Rpb3/RpoA insert domain K08M4_03100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K08M4_03100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K08M4_03110 PF01196 Ribosomal protein L17 K08M4_03120 PF11075 K08M4_03120 K08M4_03130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_03130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M4_03140 PF04225 Opacity-associated protein A LysM-like domain K08M4_03140 PF08525 K08M4_03140 K08M4_03150 PF00892 EamA-like transporter family K08M4_03160 PF13673 Acetyltransferase (GNAT) domain K08M4_03170 PF00027 Cyclic nucleotide-binding domain K08M4_03180 PF01553 Acyltransferase K08M4_03180 PF13444 Acetyltransferase (GNAT) domain K08M4_03190 PF04945 YHS domain K08M4_03200 PF05742 K08M4_03200 K08M4_03230 PF09335 K08M4_03230 K08M4_03240 PF00149 Calcineurin-like phosphoesterase K08M4_03240 PF02872 5'-nucleotidase, C-terminal domain K08M4_03250 PF01507 Phosphoadenosine phosphosulfate reductase family K08M4_03260 PF00009 Elongation factor Tu GTP binding domain K08M4_03270 PF02080 TrkA-C domain K08M4_03270 PF03600 Citrate transporter K08M4_03280 PF01583 Adenylylsulphate kinase K08M4_03290 PF10987 K08M4_03290 K08M4_03310 PF11736 Protein of unknown function (DUF3299) K08M4_03320 PF02687 K08M4_03320 K08M4_03320 PF12704 MacB-like periplasmic core domain K08M4_03330 PF00005 ABC transporter K08M4_03340 PF10986 K08M4_03340 K08M4_03350 PF10795 K08M4_03350 K08M4_03360 PF09695 K08M4_03360 K08M4_03370 PF06526 Protein of unknown function (DUF1107) K08M4_03380 PF01625 Peptide methionine sulfoxide reductase K08M4_03390 PF01103 Surface antigen K08M4_03390 PF17243 K08M4_03390 K08M4_03400 PF04357 K08M4_03400 K08M4_03410 PF06094 AIG2-like family K08M4_03420 PF00316 Fructose-1-6-bisphosphatase K08M4_03430 PF01225 Mur ligase family, catalytic domain K08M4_03430 PF02875 Mur ligase family, glutamate ligase domain K08M4_03430 PF08245 Mur ligase middle domain K08M4_03440 PF02441 Flavoprotein K08M4_03450 PF13343 Bacterial extracellular solute-binding protein K08M4_03460 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_03470 PF00005 ABC transporter K08M4_03480 PF04751 Protein of unknown function (DUF615) K08M4_03490 PF01523 Putative modulator of DNA gyrase K08M4_03500 PF00571 CBS domain K08M4_03500 PF01769 Divalent cation transporter K08M4_03500 PF03448 MgtE intracellular N domain K08M4_03510 PF00381 PTS HPr component phosphorylation site K08M4_03520 PF03668 K08M4_03520 K08M4_03530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_03540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M4_03550 PF00309 K08M4_03550 K08M4_03550 PF04552 Sigma-54, DNA binding domain K08M4_03550 PF04963 Sigma-54 factor, core binding domain K08M4_03560 PF00005 ABC transporter K08M4_03560 PF12399 Branched-chain amino acid ATP-binding cassette transporter K08M4_03570 PF03968 OstA-like protein K08M4_03580 PF06835 Lipopolysaccharide-assembly, LptC-related K08M4_03590 PF08282 haloacid dehalogenase-like hydrolase K08M4_03600 PF00571 CBS domain K08M4_03600 PF01380 SIS domain K08M4_03610 PF01699 Sodium/calcium exchanger protein K08M4_03620 PF00005 ABC transporter K08M4_03630 PF02405 K08M4_03630 K08M4_03640 PF02470 K08M4_03640 K08M4_03650 PF05494 Toluene tolerance, Ttg2 K08M4_03660 PF13466 STAS domain K08M4_03670 PF01722 BolA-like protein K08M4_03680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K08M4_03690 PF01553 Acyltransferase K08M4_03700 PF01042 Endoribonuclease L-PSP K08M4_03710 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K08M4_03710 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K08M4_03720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_03720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_03740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K08M4_03740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K08M4_03750 PF02274 Amidinotransferase K08M4_03760 PF06877 Regulator of ribonuclease activity B K08M4_03780 PF00583 Acetyltransferase (GNAT) family K08M4_03790 PF00133 tRNA synthetases class I (I, L, M and V) K08M4_03790 PF08264 Anticodon-binding domain of tRNA K08M4_03790 PF10458 Valyl tRNA synthetase tRNA binding arm K08M4_03800 PF04364 DNA polymerase III chi subunit, HolC K08M4_03810 PF00883 Cytosol aminopeptidase family, catalytic domain K08M4_03810 PF02789 Cytosol aminopeptidase family, N-terminal domain K08M4_03820 PF03739 K08M4_03820 K08M4_03830 PF03739 K08M4_03830 K08M4_03840 PF06271 K08M4_03840 K08M4_03860 PF06983 3-demethylubiquinone-9 3-methyltransferase K08M4_03870 PF01966 HD domain K08M4_03870 PF11871 K08M4_03870 K08M4_04000 PF09622 K08M4_04000 K08M4_04060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_04060 PF17200 K08M4_04060 K08M4_04140 PF01464 Transglycosylase SLT domain K08M4_04140 PF11873 Domain of unknown function (DUF3393) K08M4_04150 PF04362 Bacterial Fe(2+) trafficking K08M4_04160 PF00633 Helix-hairpin-helix motif K08M4_04160 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M4_04160 PF14815 NUDIX domain K08M4_04170 PF02390 Putative methyltransferase K08M4_04180 PF04960 Glutaminase K08M4_04190 PF04055 Radical SAM superfamily K08M4_04190 PF06969 HemN C-terminal domain K08M4_04200 PF01725 Ham1 family K08M4_04210 PF14467 Domain of unknown function (DUF4426) K08M4_04220 PF02594 Uncharacterised ACR, YggU family COG1872 K08M4_04230 PF02325 K08M4_04230 K08M4_04240 PF03807 NADP oxidoreductase coenzyme F420-dependent K08M4_04240 PF14748 Pyrroline-5-carboxylate reductase dimerisation K08M4_04250 PF01168 Alanine racemase, N-terminal domain K08M4_04260 PF00437 Type II/IV secretion system protein K08M4_04270 PF00437 Type II/IV secretion system protein K08M4_04290 PF03652 Uncharacterised protein family (UPF0081) K08M4_04300 PF02622 Uncharacterized ACR, COG1678 K08M4_04310 PF02951 Prokaryotic glutathione synthetase, N-terminal domain K08M4_04310 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain K08M4_04320 PF04452 RNA methyltransferase K08M4_04340 PF04231 Endonuclease I K08M4_04350 PF10263 K08M4_04350 K08M4_04350 PF17283 K08M4_04350 K08M4_04360 PF09955 K08M4_04360 K08M4_04370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M4_04370 PF07685 CobB/CobQ-like glutamine amidotransferase domain K08M4_04380 PF00155 Aminotransferase class I and II K08M4_04390 PF03186 K08M4_04390 K08M4_04400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_04410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_04420 PF06180 Cobalt chelatase (CbiK) K08M4_04430 PF01890 Cobalamin synthesis G C-terminus K08M4_04430 PF11760 Cobalamin synthesis G N-terminal K08M4_04430 PF11761 K08M4_04430 K08M4_04440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_04450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_04450 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K08M4_04460 PF02570 Precorrin-8X methylmutase K08M4_04470 PF01888 CbiD K08M4_04480 PF00300 Histidine phosphatase superfamily (branch 1) K08M4_04490 PF01032 FecCD transport family K08M4_04500 PF01497 Periplasmic binding protein K08M4_04510 PF00005 ABC transporter K08M4_04520 PF00438 S-adenosylmethionine synthetase, N-terminal domain K08M4_04520 PF02772 S-adenosylmethionine synthetase, central domain K08M4_04520 PF02773 S-adenosylmethionine synthetase, C-terminal domain K08M4_04530 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_04530 PF02779 Transketolase, pyrimidine binding domain K08M4_04530 PF02780 Transketolase, C-terminal domain K08M4_04550 PF00072 Response regulator receiver domain K08M4_04550 PF00486 Transcriptional regulatory protein, C terminal K08M4_04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_04590 PF00367 phosphotransferase system, EIIB K08M4_04590 PF02378 Phosphotransferase system, EIIC K08M4_04600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_04600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_04610 PF00162 Phosphoglycerate kinase K08M4_04620 PF01116 Fructose-bisphosphate aldolase class-II K08M4_04630 PF00924 Mechanosensitive ion channel K08M4_04630 PF05552 Conserved TM helix K08M4_04640 PF01810 K08M4_04640 K08M4_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_04650 PF03466 LysR substrate binding domain K08M4_04660 PF04402 Protein of unknown function (DUF541) K08M4_04670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_04670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_04680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K08M4_04690 PF01812 5-formyltetrahydrofolate cyclo-ligase family K08M4_04700 PF05164 Cell division protein ZapA K08M4_04710 PF03695 Uncharacterised protein family (UPF0149) K08M4_04720 PF01494 FAD binding domain K08M4_04730 PF01494 FAD binding domain K08M4_04740 PF06526 Protein of unknown function (DUF1107) K08M4_04750 PF04073 Aminoacyl-tRNA editing domain K08M4_04760 PF01571 Aminomethyltransferase folate-binding domain K08M4_04770 PF03937 Flavinator of succinate dehydrogenase K08M4_04780 PF00890 FAD binding domain K08M4_04780 PF02910 Fumarate reductase flavoprotein C-term K08M4_04790 PF04542 Sigma-70 region 2 K08M4_04790 PF08281 Sigma-70, region 4 K08M4_04800 PF03872 Anti sigma-E protein RseA, N-terminal domain K08M4_04800 PF03873 Anti sigma-E protein RseA, C-terminal domain K08M4_04810 PF03888 MucB/RseB family K08M4_04810 PF17188 K08M4_04810 K08M4_04820 PF04246 K08M4_04820 K08M4_04830 PF00009 Elongation factor Tu GTP binding domain K08M4_04830 PF00679 Elongation factor G C-terminus K08M4_04830 PF03144 Elongation factor Tu domain 2 K08M4_04830 PF06421 GTP-binding protein LepA C-terminus K08M4_04840 PF00717 Peptidase S24-like K08M4_04840 PF10502 Signal peptidase, peptidase S26 K08M4_04850 PF00035 Double-stranded RNA binding motif K08M4_04850 PF14622 Ribonuclease-III-like K08M4_04860 PF01926 50S ribosome-binding GTPase K08M4_04860 PF07650 KH domain K08M4_04870 PF02565 Recombination protein O C terminal K08M4_04870 PF11967 Recombination protein O N terminal K08M4_04880 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ K08M4_04890 PF01648 4'-phosphopantetheinyl transferase superfamily K08M4_04900 PF00072 Response regulator receiver domain K08M4_04900 PF00512 His Kinase A (phospho-acceptor) domain K08M4_04900 PF01627 Hpt domain K08M4_04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_04900 PF09984 K08M4_04900 K08M4_04910 PF01938 TRAM domain K08M4_04910 PF05958 tRNA (Uracil-5-)-methyltransferase K08M4_04920 PF02824 TGS domain K08M4_04920 PF04607 Region found in RelA / SpoT proteins K08M4_04920 PF13291 ACT domain K08M4_04920 PF13328 HD domain K08M4_04930 PF03819 MazG nucleotide pyrophosphohydrolase domain K08M4_04940 PF00117 Glutamine amidotransferase class-I K08M4_04940 PF06418 CTP synthase N-terminus K08M4_04950 PF00113 Enolase, C-terminal TIM barrel domain K08M4_04950 PF03952 Enolase, N-terminal domain K08M4_04960 PF04977 Septum formation initiator K08M4_04970 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K08M4_04980 PF02542 YgbB family K08M4_04990 PF01142 tRNA pseudouridine synthase D (TruD) K08M4_05000 PF01975 Survival protein SurE K08M4_05010 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K08M4_05020 PF01476 LysM domain K08M4_05020 PF01551 Peptidase family M23 K08M4_05030 PF00140 Sigma-70 factor, region 1 K08M4_05030 PF04539 Sigma-70 region 3 K08M4_05030 PF04542 Sigma-70 region 2 K08M4_05030 PF04545 Sigma-70, region 4 K08M4_05040 PF00488 MutS domain V K08M4_05040 PF01624 MutS domain I K08M4_05040 PF05188 MutS domain II K08M4_05040 PF05190 MutS family domain IV K08M4_05040 PF05192 MutS domain III K08M4_05050 PF02464 Competence-damaged protein K08M4_05060 PF00154 recA bacterial DNA recombination protein K08M4_05070 PF01978 Sugar-specific transcriptional regulator TrmB K08M4_05070 PF11495 Archaeal transcriptional regulator TrmB K08M4_05080 PF00480 ROK family K08M4_05090 PF00128 Alpha amylase, catalytic domain K08M4_05090 PF02903 Alpha amylase, N-terminal ig-like domain K08M4_05100 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_05110 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_05120 PF13416 Bacterial extracellular solute-binding protein K08M4_05130 PF16941 K08M4_05130 K08M4_05140 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_05160 PF00005 ABC transporter K08M4_05160 PF08402 TOBE domain K08M4_05170 PF00128 Alpha amylase, catalytic domain K08M4_05170 PF02806 Alpha amylase, C-terminal all-beta domain K08M4_05190 PF01411 tRNA synthetases class II (A) K08M4_05190 PF02272 DHHA1 domain K08M4_05190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M4_05210 PF00696 Amino acid kinase family K08M4_05220 PF02599 Global regulator protein family K08M4_05330 PF04277 K08M4_05330 K08M4_05340 PF00364 Biotin-requiring enzyme K08M4_05340 PF00682 HMGL-like K08M4_05340 PF02436 Conserved carboxylase domain K08M4_05350 PF03977 K08M4_05350 K08M4_05360 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_05360 PF13602 Zinc-binding dehydrogenase K08M4_05370 PF09335 K08M4_05370 K08M4_05380 PF00675 Insulinase (Peptidase family M16) K08M4_05380 PF05193 Peptidase M16 inactive domain K08M4_05390 PF04262 Glutamate-cysteine ligase K08M4_05410 PF02664 S-Ribosylhomocysteinase (LuxS) K08M4_05420 PF00571 CBS domain K08M4_05420 PF01595 K08M4_05420 K08M4_05420 PF03471 Transporter associated domain K08M4_05430 PF01578 K08M4_05430 K08M4_05440 PF00448 SRP54-type protein, GTPase domain K08M4_05440 PF02881 SRP54-type protein, helical bundle domain K08M4_05440 PF02978 Signal peptide binding domain K08M4_05450 PF00886 Ribosomal protein S16 K08M4_05460 PF01782 RimM N-terminal domain K08M4_05460 PF05239 PRC-barrel domain K08M4_05470 PF01746 tRNA (Guanine-1)-methyltransferase K08M4_05480 PF01245 Ribosomal protein L19 K08M4_05490 PF03884 Domain of unknown function (DUF329) K08M4_05500 PF07072 Protein of unknown function (DUF1342) K08M4_05510 PF01121 Dephospho-CoA kinase K08M4_05520 PF01478 Type IV leader peptidase family K08M4_05520 PF06750 K08M4_05520 K08M4_05530 PF00482 Type II secretion system (T2SS), protein F K08M4_05540 PF00437 Type II/IV secretion system protein K08M4_05540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M4_05550 PF00114 Pilin (bacterial filament) K08M4_05550 PF07963 Prokaryotic N-terminal methylation motif K08M4_05560 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain K08M4_05560 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain K08M4_05570 PF01510 N-acetylmuramoyl-L-alanine amidase K08M4_05580 PF00392 Bacterial regulatory proteins, gntR family K08M4_05580 PF07729 FCD domain K08M4_05590 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_05600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M4_05600 PF00364 Biotin-requiring enzyme K08M4_05600 PF02817 e3 binding domain K08M4_05610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_05610 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_05620 PF00440 Bacterial regulatory proteins, tetR family K08M4_05630 PF00156 Phosphoribosyl transferase domain K08M4_05640 PF00484 Carbonic anhydrase K08M4_05650 PF00916 K08M4_05650 K08M4_05650 PF01740 STAS domain K08M4_05660 PF00005 ABC transporter K08M4_05670 PF01061 K08M4_05670 K08M4_05680 PF02569 Pantoate-beta-alanine ligase K08M4_05690 PF02548 Ketopantoate hydroxymethyltransferase K08M4_05700 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M4_05710 PF01743 Poly A polymerase head domain K08M4_05710 PF12626 Polymerase A arginine-rich C-terminus K08M4_05710 PF12627 Probable RNA and SrmB- binding site of polymerase A K08M4_05720 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M4_05730 PF01258 Prokaryotic dksA/traR C4-type zinc finger K08M4_05740 PF03749 Sugar fermentation stimulation protein K08M4_05750 PF00270 DEAD/DEAH box helicase K08M4_05750 PF00271 Helicase conserved C-terminal domain K08M4_05750 PF04408 Helicase associated domain (HA2) K08M4_05750 PF08482 K08M4_05750 K08M4_05760 PF00905 Penicillin binding protein transpeptidase domain K08M4_05760 PF00912 Transglycosylase K08M4_05760 PF14814 Bifunctional transglycosylase second domain K08M4_05770 PF01734 Patatin-like phospholipase K08M4_05780 PF00330 Aconitase family (aconitate hydratase) K08M4_05780 PF06434 Aconitate hydratase 2 N-terminus K08M4_05780 PF11791 Aconitate B N-terminal domain K08M4_05790 PF06062 K08M4_05790 K08M4_05810 PF00543 Nitrogen regulatory protein P-II K08M4_05820 PF00909 Ammonium Transporter Family K08M4_05830 PF13343 Bacterial extracellular solute-binding protein K08M4_05840 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_05850 PF00005 ABC transporter K08M4_05860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_05860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_05860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_05860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_05870 PF06165 Glycosyltransferase family 36 K08M4_05870 PF17167 K08M4_05870 K08M4_05880 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M4_05880 PF02838 Glycosyl hydrolase family 20, domain 2 K08M4_05890 PF01869 BadF/BadG/BcrA/BcrD ATPase family K08M4_05900 PF00759 Glycosyl hydrolase family 9 K08M4_05900 PF02927 N-terminal ig-like domain of cellulase K08M4_05910 PF00005 ABC transporter K08M4_05910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_05920 PF00005 ABC transporter K08M4_05920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_05930 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_05930 PF12911 K08M4_05930 K08M4_05940 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_05950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_05960 PF00072 Response regulator receiver domain K08M4_05960 PF00512 His Kinase A (phospho-acceptor) domain K08M4_05960 PF00672 HAMP domain K08M4_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_05960 PF13188 PAS domain K08M4_05970 PF05175 Methyltransferase small domain K08M4_05970 PF08468 Methyltransferase small domain N-terminal K08M4_05980 PF01594 K08M4_05980 K08M4_06000 PF00202 Aminotransferase class-III K08M4_06010 PF01521 Iron-sulphur cluster biosynthesis K08M4_06020 PF16576 K08M4_06020 K08M4_06030 PF00873 AcrB/AcrD/AcrF family K08M4_06040 PF01551 Peptidase family M23 K08M4_06040 PF08525 K08M4_06040 K08M4_06050 PF00579 tRNA synthetases class I (W and Y) K08M4_06060 PF01769 Divalent cation transporter K08M4_06070 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family K08M4_06080 PF13609 Gram-negative porin K08M4_06090 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M4_06090 PF03449 Transcription elongation factor, N-terminal K08M4_06100 PF01985 CRS1 / YhbY (CRM) domain K08M4_06110 PF01728 FtsJ-like methyltransferase K08M4_06120 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_06120 PF01434 Peptidase family M41 K08M4_06120 PF06480 FtsH Extracellular K08M4_06130 PF00809 Pterin binding enzyme K08M4_06140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_06140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_06140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_06140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_06150 PF03840 Preprotein translocase SecG subunit K08M4_06180 PF02576 Uncharacterised BCR, YhbC family COG0779 K08M4_06180 PF17384 K08M4_06180 K08M4_06190 PF08529 NusA N-terminal domain K08M4_06190 PF13184 NusA-like KH domain K08M4_06190 PF14520 Helix-hairpin-helix domain K08M4_06200 PF00009 Elongation factor Tu GTP binding domain K08M4_06200 PF04760 Translation initiation factor IF-2, N-terminal region K08M4_06200 PF08364 K08M4_06200 K08M4_06200 PF11987 Translation-initiation factor 2 K08M4_06210 PF02033 Ribosome-binding factor A K08M4_06220 PF01509 TruB family pseudouridylate synthase (N terminal domain) K08M4_06220 PF09157 Pseudouridine synthase II TruB, C-terminal K08M4_06220 PF16198 K08M4_06220 K08M4_06230 PF00312 Ribosomal protein S15 K08M4_06240 PF00013 KH domain K08M4_06240 PF00575 S1 RNA binding domain K08M4_06240 PF01138 3' exoribonuclease family, domain 1 K08M4_06240 PF03725 3' exoribonuclease family, domain 2 K08M4_06240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain K08M4_06260 PF12802 MarR family K08M4_06270 PF01554 MatE K08M4_06280 PF01136 K08M4_06280 K08M4_06290 PF01136 K08M4_06290 K08M4_06300 PF00563 EAL domain K08M4_06300 PF00990 GGDEF domain K08M4_06300 PF08448 PAS fold K08M4_06300 PF13188 PAS domain K08M4_06310 PF02036 SCP-2 sterol transfer family K08M4_06320 PF00583 Acetyltransferase (GNAT) family K08M4_06330 PF03603 DNA polymerase III psi subunit K08M4_06340 PF00583 Acetyltransferase (GNAT) family K08M4_06350 PF00009 Elongation factor Tu GTP binding domain K08M4_06350 PF03144 Elongation factor Tu domain 2 K08M4_06350 PF16658 K08M4_06350 K08M4_06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_06360 PF03466 LysR substrate binding domain K08M4_06390 PF17320 K08M4_06390 K08M4_06400 PF01026 TatD related DNase K08M4_06410 PF01773 Na+ dependent nucleoside transporter N-terminus K08M4_06410 PF07662 Na+ dependent nucleoside transporter C-terminus K08M4_06410 PF07670 Nucleoside recognition K08M4_06420 PF01791 DeoC/LacD family aldolase K08M4_06430 PF00591 Glycosyl transferase family, a/b domain K08M4_06430 PF02885 Glycosyl transferase family, helical bundle domain K08M4_06430 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain K08M4_06440 PF01676 Metalloenzyme superfamily K08M4_06450 PF01048 Phosphorylase superfamily K08M4_06460 PF10144 K08M4_06460 K08M4_06470 PF12710 haloacid dehalogenase-like hydrolase K08M4_06480 PF07238 PilZ domain K08M4_06490 PF13481 AAA domain K08M4_06490 PF13541 Subunit ChlI of Mg-chelatase K08M4_06500 PF00009 Elongation factor Tu GTP binding domain K08M4_06500 PF00679 Elongation factor G C-terminus K08M4_06500 PF03144 Elongation factor Tu domain 2 K08M4_06500 PF03764 Elongation factor G, domain IV K08M4_06500 PF14492 Elongation Factor G, domain II K08M4_06520 PF00577 Outer membrane usher protein K08M4_06530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain K08M4_06550 PF00196 Bacterial regulatory proteins, luxR family K08M4_06560 PF09905 Uncharacterized conserved protein (DUF2132) K08M4_06580 PF07811 K08M4_06580 K08M4_06590 PF07811 K08M4_06590 K08M4_06600 PF00092 von Willebrand factor type A domain K08M4_06600 PF13400 K08M4_06600 K08M4_06610 PF00501 AMP-binding enzyme K08M4_06620 PF12833 Helix-turn-helix domain K08M4_06640 PF01478 Type IV leader peptidase family K08M4_06660 PF08666 SAF domain K08M4_06660 PF16976 K08M4_06660 K08M4_06670 PF00263 K08M4_06670 K08M4_06670 PF13629 K08M4_06670 K08M4_06690 PF13400 K08M4_06690 K08M4_06700 PF07811 K08M4_06700 K08M4_06710 PF07811 K08M4_06710 K08M4_06720 PF13614 AAA domain K08M4_06730 PF00437 Type II/IV secretion system protein K08M4_06740 PF00482 Type II secretion system (T2SS), protein F K08M4_06750 PF00482 Type II secretion system (T2SS), protein F K08M4_06760 PF13374 Tetratricopeptide repeat K08M4_06760 PF13432 Tetratricopeptide repeat K08M4_06760 PF14559 Tetratricopeptide repeat K08M4_06780 PF00535 Glycosyl transferase family 2 K08M4_06790 PF08241 Methyltransferase domain K08M4_06800 PF02417 K08M4_06800 K08M4_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_06820 PF03466 LysR substrate binding domain K08M4_06830 PF06094 AIG2-like family K08M4_06840 PF05940 K08M4_06840 K08M4_06850 PF12286 K08M4_06850 K08M4_06860 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M4_06870 PF11810 K08M4_06870 K08M4_06880 PF01546 Peptidase family M20/M25/M40 K08M4_06880 PF07687 Peptidase dimerisation domain K08M4_06890 PF00860 Permease family K08M4_06900 PF00156 Phosphoribosyl transferase domain K08M4_06910 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) K08M4_06920 PF07417 Transcriptional regulator Crl K08M4_06930 PF00696 Amino acid kinase family K08M4_06930 PF01472 PUA domain K08M4_06940 PF00171 Aldehyde dehydrogenase family K08M4_06950 PF03477 ATP cone domain K08M4_06960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_06960 PF01872 RibD C-terminal domain K08M4_06970 PF00677 Lumazine binding domain K08M4_06980 PF00925 GTP cyclohydrolase II K08M4_06980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K08M4_06990 PF00885 6,7-dimethyl-8-ribityllumazine synthase K08M4_07000 PF01029 NusB family K08M4_07010 PF00586 AIR synthase related protein, N-terminal domain K08M4_07010 PF02769 AIR synthase related protein, C-terminal domain K08M4_07020 PF04608 Phosphatidylglycerophosphatase A K08M4_07030 PF02779 Transketolase, pyrimidine binding domain K08M4_07030 PF02780 Transketolase, C-terminal domain K08M4_07030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase K08M4_07040 PF00348 Polyprenyl synthetase K08M4_07050 PF02609 Exonuclease VII small subunit K08M4_07060 PF01618 K08M4_07060 K08M4_07070 PF00691 OmpA family K08M4_07070 PF13677 K08M4_07070 K08M4_07080 PF02568 Thiamine biosynthesis protein (ThiI) K08M4_07080 PF02926 THUMP domain K08M4_07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_07090 PF03466 LysR substrate binding domain K08M4_07100 PF00561 alpha/beta hydrolase fold K08M4_07110 PF04241 K08M4_07110 K08M4_07120 PF01728 FtsJ-like methyltransferase K08M4_07130 PF00593 TonB dependent receptor K08M4_07130 PF07715 TonB-dependent Receptor Plug Domain K08M4_07140 PF04055 Radical SAM superfamily K08M4_07140 PF16881 K08M4_07140 K08M4_07150 PF03099 Biotin/lipoate A/B protein ligase family K08M4_07160 PF04359 Protein of unknown function (DUF493) K08M4_07170 PF00768 D-alanyl-D-alanine carboxypeptidase K08M4_07170 PF07943 Penicillin-binding protein 5, C-terminal domain K08M4_07180 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel K08M4_07180 PF05036 Sporulation related domain K08M4_07190 PF01098 K08M4_07190 K08M4_07200 PF00905 Penicillin binding protein transpeptidase domain K08M4_07200 PF03717 Penicillin-binding Protein dimerisation domain K08M4_07210 PF02590 Predicted SPOUT methyltransferase K08M4_07220 PF02410 Oligomerisation domain K08M4_07230 PF06144 DNA polymerase III, delta subunit K08M4_07230 PF14840 Processivity clamp loader gamma complex DNA pol III C-term K08M4_07240 PF04390 Lipopolysaccharide-assembly K08M4_07250 PF00133 tRNA synthetases class I (I, L, M and V) K08M4_07250 PF08264 Anticodon-binding domain of tRNA K08M4_07250 PF13603 Leucyl-tRNA synthetase, Domain 2 K08M4_07260 PF07295 K08M4_07260 K08M4_07270 PF00795 Carbon-nitrogen hydrolase K08M4_07280 PF00571 CBS domain K08M4_07280 PF03471 Transporter associated domain K08M4_07290 PF02130 Uncharacterized protein family UPF0054 K08M4_07300 PF02562 PhoH-like protein K08M4_07310 PF00919 Uncharacterized protein family UPF0004 K08M4_07310 PF01938 TRAM domain K08M4_07310 PF04055 Radical SAM superfamily K08M4_07320 PF01494 FAD binding domain K08M4_07330 PF10282 Lactonase, 7-bladed beta-propeller K08M4_07530 PF01926 50S ribosome-binding GTPase K08M4_07530 PF06071 Protein of unknown function (DUF933) K08M4_07540 PF01195 Peptidyl-tRNA hydrolase K08M4_07550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K08M4_07550 PF14572 Phosphoribosyl synthetase-associated domain K08M4_07560 PF00288 GHMP kinases N terminal domain K08M4_07560 PF08544 GHMP kinases C terminal K08M4_07570 PF03550 Outer membrane lipoprotein LolB K08M4_07580 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain K08M4_07580 PF01488 Shikimate / quinate 5-dehydrogenase K08M4_07580 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain K08M4_07590 PF00472 RF-1 domain K08M4_07590 PF03462 PCRF domain K08M4_07600 PF13847 Methyltransferase domain K08M4_07610 PF04247 K08M4_07610 K08M4_07620 PF13369 K08M4_07620 K08M4_07620 PF13371 Tetratricopeptide repeat K08M4_07630 PF00793 DAHP synthetase I family K08M4_07640 PF00149 Calcineurin-like phosphoesterase K08M4_07640 PF02872 5'-nucleotidase, C-terminal domain K08M4_07650 PF04073 Aminoacyl-tRNA editing domain K08M4_07660 PF00849 RNA pseudouridylate synthase K08M4_07660 PF01479 S4 domain K08M4_07670 PF01713 Smr domain K08M4_07680 PF11346 K08M4_07680 K08M4_07700 PF01963 K08M4_07700 K08M4_07710 PF00728 Glycosyl hydrolase family 20, catalytic domain K08M4_07710 PF02838 Glycosyl hydrolase family 20, domain 2 K08M4_07710 PF03173 Putative carbohydrate binding domain K08M4_07710 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain K08M4_07720 PF06178 Oligogalacturonate-specific porin protein (KdgM) K08M4_07730 PF04214 K08M4_07730 K08M4_07740 PF00122 E1-E2 ATPase K08M4_07740 PF00403 Heavy-metal-associated domain K08M4_07740 PF00702 haloacid dehalogenase-like hydrolase K08M4_07750 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M4_07760 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_07760 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_07770 PF13561 Enoyl-(Acyl carrier protein) reductase K08M4_07790 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_07790 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_07800 PF11659 K08M4_07800 K08M4_07810 PF03176 MMPL family K08M4_07820 PF03548 Outer membrane lipoprotein carrier protein LolA K08M4_07830 PF13279 Thioesterase-like superfamily K08M4_07840 PF00221 Aromatic amino acid lyase K08M4_07850 PF00535 Glycosyl transferase family 2 K08M4_07850 PF03279 K08M4_07850 K08M4_07870 PF00501 AMP-binding enzyme K08M4_07870 PF13193 AMP-binding enzyme C-terminal domain K08M4_07880 PF04279 K08M4_07880 K08M4_07890 PF00550 Phosphopantetheine attachment site K08M4_07900 PF00550 Phosphopantetheine attachment site K08M4_07910 PF01553 Acyltransferase K08M4_07920 PF13723 K08M4_07920 K08M4_07940 PF00891 O-methyltransferase K08M4_07950 PF01494 FAD binding domain K08M4_07970 PF16538 K08M4_07970 K08M4_07970 PF16539 K08M4_07970 K08M4_07970 PF16548 K08M4_07970 K08M4_07990 PF02169 LPP20 lipoprotein K08M4_08000 PF05130 FlgN protein K08M4_08010 PF04316 Anti-sigma-28 factor, FlgM K08M4_08020 PF13144 SAF-like K08M4_08030 PF00072 Response regulator receiver domain K08M4_08030 PF01584 CheW-like domain K08M4_08040 PF01739 CheR methyltransferase, SAM binding domain K08M4_08040 PF03705 CheR methyltransferase, all-alpha domain K08M4_08060 PF00460 Flagella basal body rod protein K08M4_08060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_08070 PF03963 K08M4_08070 K08M4_08070 PF13860 FlgD Ig-like domain K08M4_08070 PF13861 FlgD Tudor-like domain K08M4_08080 PF00460 Flagella basal body rod protein K08M4_08080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_08080 PF07559 Flagellar basal body protein FlaE K08M4_08090 PF00460 Flagella basal body rod protein K08M4_08090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_08100 PF00460 Flagella basal body rod protein K08M4_08100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_08110 PF02107 K08M4_08110 K08M4_08120 PF02119 K08M4_08120 K08M4_08130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K08M4_08130 PF10135 K08M4_08130 K08M4_08140 PF00460 Flagella basal body rod protein K08M4_08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K08M4_08150 PF00669 Bacterial flagellin N-terminal helical region K08M4_08160 PF00669 Bacterial flagellin N-terminal helical region K08M4_08160 PF00700 Bacterial flagellin C-terminal helical region K08M4_08160 PF07196 Flagellin hook IN motif K08M4_08180 PF00669 Bacterial flagellin N-terminal helical region K08M4_08180 PF00700 Bacterial flagellin C-terminal helical region K08M4_08180 PF07196 Flagellin hook IN motif K08M4_08190 PF00669 Bacterial flagellin N-terminal helical region K08M4_08190 PF00700 Bacterial flagellin C-terminal helical region K08M4_08190 PF07196 Flagellin hook IN motif K08M4_08200 PF03646 FlaG protein K08M4_08210 PF02465 K08M4_08210 K08M4_08210 PF07195 K08M4_08210 K08M4_08210 PF07196 Flagellin hook IN motif K08M4_08230 PF02561 Flagellar protein FliS K08M4_08240 PF00158 Sigma-54 interaction domain K08M4_08240 PF02954 Bacterial regulatory protein, Fis family K08M4_08240 PF06490 K08M4_08240 K08M4_08250 PF00512 His Kinase A (phospho-acceptor) domain K08M4_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_08250 PF13188 PAS domain K08M4_08260 PF00072 Response regulator receiver domain K08M4_08260 PF00158 Sigma-54 interaction domain K08M4_08260 PF02954 Bacterial regulatory protein, Fis family K08M4_08270 PF02049 K08M4_08270 K08M4_08280 PF01514 Secretory protein of YscJ/FliF family K08M4_08280 PF08345 K08M4_08280 K08M4_08290 PF01706 FliG C-terminal domain K08M4_08290 PF14841 FliG middle domain K08M4_08290 PF14842 FliG N-terminal domain K08M4_08300 PF02108 K08M4_08300 K08M4_08310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_08320 PF02050 Flagellar FliJ protein K08M4_08330 PF02120 Flagellar hook-length control protein FliK K08M4_08340 PF03748 K08M4_08340 K08M4_08350 PF01052 Surface presentation of antigens (SPOA) K08M4_08350 PF02154 Flagellar motor switch protein FliM K08M4_08360 PF01052 Surface presentation of antigens (SPOA) K08M4_08370 PF04347 K08M4_08370 K08M4_08380 PF00813 K08M4_08380 K08M4_08390 PF01313 K08M4_08390 K08M4_08400 PF01311 K08M4_08400 K08M4_08410 PF01312 FlhB HrpN YscU SpaS Family K08M4_08420 PF00771 FHIPEP family K08M4_08430 PF00448 SRP54-type protein, GTPase domain K08M4_08440 PF10609 ParA/MinD ATPase like K08M4_08450 PF04539 Sigma-70 region 3 K08M4_08450 PF04542 Sigma-70 region 2 K08M4_08450 PF04545 Sigma-70, region 4 K08M4_08460 PF00072 Response regulator receiver domain K08M4_08470 PF04344 Chemotaxis phosphatase, CheZ K08M4_08480 PF01584 CheW-like domain K08M4_08480 PF01627 Hpt domain K08M4_08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_08480 PF02895 Signal transducing histidine kinase, homodimeric domain K08M4_08490 PF00072 Response regulator receiver domain K08M4_08490 PF01339 CheB methylesterase K08M4_08500 PF13614 AAA domain K08M4_08510 PF01584 CheW-like domain K08M4_08520 PF01584 CheW-like domain K08M4_08530 PF10975 K08M4_08530 K08M4_08540 PF00005 ABC transporter K08M4_08550 PF03379 K08M4_08550 K08M4_08560 PF01578 K08M4_08560 K08M4_08570 PF04995 K08M4_08570 K08M4_08580 PF03100 CcmE K08M4_08590 PF01578 K08M4_08590 K08M4_08590 PF16327 K08M4_08590 K08M4_08600 PF08534 Redoxin K08M4_08610 PF03918 Cytochrome C biogenesis protein K08M4_08620 PF14559 Tetratricopeptide repeat K08M4_08630 PF04333 K08M4_08630 K08M4_08640 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_08650 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_08660 PF11859 K08M4_08660 K08M4_08670 PF04542 Sigma-70 region 2 K08M4_08670 PF08281 Sigma-70, region 4 K08M4_08680 PF00108 Thiolase, N-terminal domain K08M4_08680 PF02803 Thiolase, C-terminal domain K08M4_08690 PF00378 Enoyl-CoA hydratase/isomerase family K08M4_08690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K08M4_08690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K08M4_08700 PF00675 Insulinase (Peptidase family M16) K08M4_08700 PF05193 Peptidase M16 inactive domain K08M4_08700 PF16187 K08M4_08700 K08M4_08710 PF00300 Histidine phosphatase superfamily (branch 1) K08M4_08720 PF01713 Smr domain K08M4_08730 PF05175 Methyltransferase small domain K08M4_08740 PF01810 K08M4_08740 K08M4_08760 PF02696 K08M4_08760 K08M4_08770 PF00072 Response regulator receiver domain K08M4_08770 PF00486 Transcriptional regulatory protein, C terminal K08M4_08780 PF00672 HAMP domain K08M4_08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_08790 PF01547 Bacterial extracellular solute-binding protein K08M4_08800 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_08810 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_08820 PF00005 ABC transporter K08M4_08830 PF01926 50S ribosome-binding GTPase K08M4_08830 PF13167 K08M4_08830 K08M4_08830 PF16360 K08M4_08830 K08M4_08840 PF03776 Septum formation topological specificity factor MinE K08M4_08850 PF13614 AAA domain K08M4_08860 PF03775 Septum formation inhibitor MinC, C-terminal domain K08M4_08860 PF05209 Septum formation inhibitor MinC, N-terminal domain K08M4_08870 PF05166 YcgL domain K08M4_08880 PF13406 Transglycosylase SLT domain K08M4_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_08890 PF03466 LysR substrate binding domain K08M4_08900 PF01773 Na+ dependent nucleoside transporter N-terminus K08M4_08900 PF07662 Na+ dependent nucleoside transporter C-terminus K08M4_08900 PF07670 Nucleoside recognition K08M4_08910 PF00999 Sodium/hydrogen exchanger family K08M4_08920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K08M4_08920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K08M4_08940 PF13673 Acetyltransferase (GNAT) domain K08M4_08950 PF01264 Chorismate synthase K08M4_08980 PF03458 K08M4_08980 K08M4_08990 PF04315 K08M4_08990 K08M4_09000 PF08891 K08M4_09000 K08M4_09010 PF03358 NADPH-dependent FMN reductase K08M4_09020 PF01266 FAD dependent oxidoreductase K08M4_09020 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K08M4_09030 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_09030 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_09050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_09050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_09050 PF11890 Domain of unknown function (DUF3410) K08M4_09060 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M4_09060 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M4_09080 PF01416 tRNA pseudouridine synthase K08M4_09090 PF01039 Carboxyl transferase domain K08M4_09100 PF02875 Mur ligase family, glutamate ligase domain K08M4_09100 PF08245 Mur ligase middle domain K08M4_09110 PF05036 Sporulation related domain K08M4_09120 PF02674 K08M4_09120 K08M4_09130 PF13522 Glutamine amidotransferase domain K08M4_09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_09140 PF03466 LysR substrate binding domain K08M4_09150 PF00072 Response regulator receiver domain K08M4_09170 PF04304 K08M4_09170 K08M4_09180 PF00156 Phosphoribosyl transferase domain K08M4_09190 PF12168 K08M4_09190 K08M4_09190 PF12169 DNA polymerase III subunits gamma and tau domain III K08M4_09190 PF12170 DNA polymerase III tau subunit V interacting with alpha K08M4_09190 PF13177 DNA polymerase III, delta subunit K08M4_09200 PF02575 YbaB/EbfC DNA-binding family K08M4_09210 PF02132 RecR protein K08M4_09210 PF13662 Toprim domain K08M4_09220 PF00230 Major intrinsic protein K08M4_09230 PF03692 K08M4_09230 K08M4_09240 PF03692 K08M4_09240 K08M4_09250 PF00245 Alkaline phosphatase K08M4_09260 PF02028 BCCT family transporter K08M4_09280 PF04187 Protein of unknown function, DUF399 K08M4_09290 PF13847 Methyltransferase domain K08M4_09300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_09300 PF17201 K08M4_09300 K08M4_09310 PF01263 Aldose 1-epimerase K08M4_09320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_09320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_09330 PF01641 SelR domain K08M4_09340 PF11207 K08M4_09340 K08M4_09350 PF07023 K08M4_09350 K08M4_09360 PF00710 Asparaginase K08M4_09370 PF01343 Peptidase family S49 K08M4_09380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_09380 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_09390 PF00881 Nitroreductase family K08M4_09400 PF01131 DNA topoisomerase K08M4_09400 PF01751 Toprim domain K08M4_09410 PF11279 K08M4_09410 K08M4_09420 PF00106 short chain dehydrogenase K08M4_09430 PF00850 Histone deacetylase domain K08M4_09450 PF02082 Transcriptional regulator K08M4_09460 PF05940 K08M4_09460 K08M4_09490 PF00884 Sulfatase K08M4_09490 PF11893 K08M4_09490 K08M4_09500 PF07208 Protein of unknown function (DUF1414) K08M4_09510 PF04245 K08M4_09510 K08M4_09520 PF01627 Hpt domain K08M4_09540 PF03553 K08M4_09540 K08M4_09550 PF01118 Semialdehyde dehydrogenase, NAD binding domain K08M4_09550 PF02774 Semialdehyde dehydrogenase, dimerisation domain K08M4_09560 PF00520 Ion transport protein K08M4_09570 PF01914 K08M4_09570 K08M4_09580 PF00171 Aldehyde dehydrogenase family K08M4_09580 PF00465 Iron-containing alcohol dehydrogenase K08M4_09590 PF00106 short chain dehydrogenase K08M4_09600 PF11993 K08M4_09600 K08M4_09610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K08M4_09610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K08M4_09620 PF00462 Glutaredoxin K08M4_09630 PF13743 Thioredoxin K08M4_09640 PF03553 K08M4_09640 K08M4_09640 PF13726 K08M4_09640 K08M4_09650 PF00929 Exonuclease K08M4_09660 PF00691 OmpA family K08M4_09670 PF10952 K08M4_09670 K08M4_09680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_09690 PF00633 Helix-hairpin-helix motif K08M4_09690 PF00730 HhH-GPD superfamily base excision DNA repair protein K08M4_09690 PF10576 Iron-sulfur binding domain of endonuclease III K08M4_09700 PF02508 K08M4_09700 K08M4_09710 PF04205 FMN-binding domain K08M4_09720 PF03116 K08M4_09720 K08M4_09730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K08M4_09730 PF10531 SLBB domain K08M4_09730 PF12838 4Fe-4S dicluster domain K08M4_09730 PF13375 RnfC Barrel sandwich hybrid domain K08M4_09740 PF04060 Putative Fe-S cluster K08M4_09740 PF14697 4Fe-4S dicluster domain K08M4_09750 PF02508 K08M4_09750 K08M4_09770 PF00271 Helicase conserved C-terminal domain K08M4_09770 PF02151 UvrB/uvrC motif K08M4_09770 PF04851 Type III restriction enzyme, res subunit K08M4_09770 PF12344 Ultra-violet resistance protein B K08M4_09780 PF00072 Response regulator receiver domain K08M4_09780 PF00158 Sigma-54 interaction domain K08M4_09780 PF02954 Bacterial regulatory protein, Fis family K08M4_09790 PF01627 Hpt domain K08M4_09800 PF01933 Uncharacterised protein family UPF0052 K08M4_09810 PF04055 Radical SAM superfamily K08M4_09810 PF06463 Molybdenum Cofactor Synthesis C K08M4_09810 PF13353 4Fe-4S single cluster domain K08M4_09820 PF00994 Probable molybdopterin binding domain K08M4_09830 PF01967 MoaC family K08M4_09840 PF02597 ThiS family K08M4_09850 PF02391 MoaE protein K08M4_09860 PF01609 Transposase DDE domain K08M4_09860 PF13006 K08M4_09860 K08M4_09870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_09880 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_09890 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_09890 PF12911 K08M4_09890 K08M4_09900 PF00005 ABC transporter K08M4_09900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_09910 PF00005 ABC transporter K08M4_09910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_09920 PF13409 Glutathione S-transferase, N-terminal domain K08M4_09920 PF13410 Glutathione S-transferase, C-terminal domain K08M4_09930 PF00563 EAL domain K08M4_09930 PF00990 GGDEF domain K08M4_09930 PF08269 Cache domain K08M4_09950 PF01515 Phosphate acetyl/butaryl transferase K08M4_09950 PF07085 DRTGG domain K08M4_09950 PF13500 AAA domain K08M4_09960 PF00871 Acetokinase family K08M4_09970 PF04217 K08M4_09970 K08M4_09980 PF04392 ABC transporter substrate binding protein K08M4_09990 PF00990 GGDEF domain K08M4_10000 PF01207 Dihydrouridine synthase (Dus) K08M4_10010 PF07963 Prokaryotic N-terminal methylation motif K08M4_10020 PF02810 SEC-C motif K08M4_10020 PF03695 Uncharacterised protein family (UPF0149) K08M4_10030 PF02600 Disulfide bond formation protein DsbB K08M4_10040 PF06450 K08M4_10040 K08M4_10050 PF00392 Bacterial regulatory proteins, gntR family K08M4_10050 PF07840 FadR C-terminal domain K08M4_10060 PF07308 K08M4_10060 K08M4_10070 PF01588 Putative tRNA binding domain K08M4_10070 PF09334 tRNA synthetases class I (M) K08M4_10080 PF10609 ParA/MinD ATPase like K08M4_10090 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_10100 PF05170 K08M4_10100 K08M4_10110 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K08M4_10110 PF12557 Cob(I)alamin adenosyltransferase N terminal K08M4_10120 PF01451 Low molecular weight phosphotyrosine protein phosphatase K08M4_10130 PF00916 K08M4_10130 K08M4_10140 PF00575 S1 RNA binding domain K08M4_10140 PF10150 Ribonuclease E/G family K08M4_10150 PF00849 RNA pseudouridylate synthase K08M4_10150 PF01479 S4 domain K08M4_10160 PF02545 Maf-like protein K08M4_10170 PF02620 K08M4_10170 K08M4_10180 PF01783 Ribosomal L32p protein family K08M4_10190 PF02504 Fatty acid synthesis protein K08M4_10200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M4_10200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M4_10210 PF00698 Acyl transferase domain K08M4_10220 PF13561 Enoyl-(Acyl carrier protein) reductase K08M4_10230 PF00550 Phosphopantetheine attachment site K08M4_10240 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_10240 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_10250 PF01063 Aminotransferase class IV K08M4_10260 PF02618 YceG-like family K08M4_10270 PF02223 Thymidylate kinase K08M4_10280 PF09115 DNA polymerase III, delta subunit, C terminal K08M4_10280 PF13177 DNA polymerase III, delta subunit K08M4_10290 PF01026 TatD related DNase K08M4_10300 PF00367 phosphotransferase system, EIIB K08M4_10300 PF02378 Phosphotransferase system, EIIC K08M4_10320 PF16951 K08M4_10320 K08M4_10330 PF00209 Sodium:neurotransmitter symporter family K08M4_10360 PF01734 Patatin-like phospholipase K08M4_10370 PF00224 Pyruvate kinase, barrel domain K08M4_10370 PF02887 Pyruvate kinase, alpha/beta domain K08M4_10380 PF00480 ROK family K08M4_10390 PF00072 Response regulator receiver domain K08M4_10390 PF01584 CheW-like domain K08M4_10400 PF01336 OB-fold nucleic acid binding domain K08M4_10400 PF02811 PHP domain K08M4_10400 PF07733 Bacterial DNA polymerase III alpha subunit K08M4_10400 PF14579 Helix-hairpin-helix motif K08M4_10410 PF00817 impB/mucB/samB family K08M4_10430 PF00106 short chain dehydrogenase K08M4_10440 PF01343 Peptidase family S49 K08M4_10440 PF08496 K08M4_10440 K08M4_10450 PF04293 K08M4_10450 K08M4_10460 PF04285 K08M4_10460 K08M4_10470 PF06798 K08M4_10470 K08M4_10470 PF08298 PrkA AAA domain K08M4_10480 PF03887 YfbU domain K08M4_10490 PF04055 Radical SAM superfamily K08M4_10490 PF13353 4Fe-4S single cluster domain K08M4_10500 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) K08M4_10510 PF01228 Glycine radical K08M4_10510 PF02901 Pyruvate formate lyase K08M4_10520 PF11840 K08M4_10520 K08M4_10530 PF00005 ABC transporter K08M4_10540 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_10550 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_10560 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_10580 PF03372 Endonuclease/Exonuclease/phosphatase family K08M4_10590 PF00326 Prolyl oligopeptidase family K08M4_10590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M4_10600 PF07690 Major Facilitator Superfamily K08M4_10610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_10610 PF00672 HAMP domain K08M4_10610 PF02743 Cache domain K08M4_10620 PF08007 Cupin superfamily protein K08M4_10630 PF10689 K08M4_10630 K08M4_10640 PF07445 Primosomal replication protein priB and priC K08M4_10650 PF01925 K08M4_10650 K08M4_10660 PF06733 DEAD_2 K08M4_10660 PF13307 Helicase C-terminal domain K08M4_10670 PF13609 Gram-negative porin K08M4_10680 PF09829 K08M4_10680 K08M4_10690 PF00849 RNA pseudouridylate synthase K08M4_10700 PF03971 Monomeric isocitrate dehydrogenase K08M4_10720 PF00313 'Cold-shock' DNA-binding domain K08M4_10730 PF02617 ATP-dependent Clp protease adaptor protein ClpS K08M4_10740 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_10740 PF02861 Clp amino terminal domain K08M4_10740 PF07724 AAA domain (Cdc48 subfamily) K08M4_10740 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_10750 PF01176 Translation initiation factor 1A / IF-1 K08M4_10760 PF04376 K08M4_10760 K08M4_10760 PF04377 K08M4_10760 K08M4_10770 PF03588 Leucyl/phenylalanyl-tRNA protein transferase K08M4_10780 PF05433 K08M4_10780 K08M4_10790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K08M4_10800 PF10692 Protein of unknown function (DUF2498) K08M4_10810 PF01131 DNA topoisomerase K08M4_10810 PF01396 K08M4_10810 K08M4_10810 PF01751 Toprim domain K08M4_10810 PF08272 Topoisomerase I zinc-ribbon-like K08M4_10820 PF00483 Nucleotidyl transferase K08M4_10830 PF00534 Glycosyl transferases group 1 K08M4_10830 PF08323 Starch synthase catalytic domain K08M4_10840 PF00561 alpha/beta hydrolase fold K08M4_10850 PF09413 Domain of unknown function (DUF2007) K08M4_10860 PF09335 K08M4_10860 K08M4_10870 PF04993 TfoX N-terminal domain K08M4_10870 PF04994 TfoX C-terminal domain K08M4_10880 PF00356 Bacterial regulatory proteins, lacI family K08M4_10880 PF13377 Periplasmic binding protein-like domain K08M4_10890 PF02613 Nitrate reductase delta subunit K08M4_10900 PF00072 Response regulator receiver domain K08M4_10900 PF00486 Transcriptional regulatory protein, C terminal K08M4_10920 PF02698 DUF218 domain K08M4_10930 PF08241 Methyltransferase domain K08M4_10940 PF03882 KicB killing factor K08M4_10940 PF17192 K08M4_10940 K08M4_10940 PF17193 K08M4_10940 K08M4_10950 PF04288 MukE-like family K08M4_10960 PF04310 MukB N-terminal K08M4_10960 PF13558 Putative exonuclease SbcCD, C subunit K08M4_10960 PF16330 K08M4_10960 K08M4_10970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_10970 PF02743 Cache domain K08M4_10980 PF14397 K08M4_10980 K08M4_10990 PF14400 K08M4_10990 K08M4_10990 PF14402 K08M4_10990 K08M4_11000 PF05618 Putative ATP-dependant zinc protease K08M4_11010 PF08003 Protein of unknown function (DUF1698) K08M4_11020 PF13649 Methyltransferase domain K08M4_11030 PF01904 Protein of unknown function DUF72 K08M4_11040 PF00152 tRNA synthetases class II (D, K and N) K08M4_11040 PF01336 OB-fold nucleic acid binding domain K08M4_11040 PF02938 GAD domain K08M4_11050 PF02075 Crossover junction endodeoxyribonuclease RuvC K08M4_11060 PF01330 RuvA N terminal domain K08M4_11060 PF07499 RuvA, C-terminal domain K08M4_11060 PF14520 Helix-hairpin-helix domain K08M4_11070 PF05491 Holliday junction DNA helicase ruvB C-terminus K08M4_11070 PF05496 Holliday junction DNA helicase ruvB N-terminus K08M4_11080 PF01654 K08M4_11080 K08M4_11090 PF02322 K08M4_11090 K08M4_11100 PF08173 K08M4_11100 K08M4_11110 PF09600 K08M4_11110 K08M4_11120 PF03061 Thioesterase superfamily K08M4_11130 PF01618 K08M4_11130 K08M4_11140 PF02472 Biopolymer transport protein ExbD/TolR K08M4_11150 PF06519 TolA C-terminal K08M4_11160 PF04052 TolB amino-terminal domain K08M4_11160 PF07676 WD40-like Beta Propeller Repeat K08M4_11170 PF00691 OmpA family K08M4_11180 PF13174 Tetratricopeptide repeat K08M4_11180 PF13432 Tetratricopeptide repeat K08M4_11180 PF16331 K08M4_11180 K08M4_11190 PF02445 Quinolinate synthetase A protein K08M4_11200 PF07715 TonB-dependent Receptor Plug Domain K08M4_11210 PF04954 Siderophore-interacting protein K08M4_11210 PF08021 Siderophore-interacting FAD-binding domain K08M4_11220 PF01497 Periplasmic binding protein K08M4_11230 PF01032 FecCD transport family K08M4_11240 PF01032 FecCD transport family K08M4_11250 PF00005 ABC transporter K08M4_11260 PF07885 Ion channel K08M4_11270 PF03695 Uncharacterised protein family (UPF0149) K08M4_11280 PF00072 Response regulator receiver domain K08M4_11280 PF00512 His Kinase A (phospho-acceptor) domain K08M4_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_11290 PF06610 K08M4_11290 K08M4_11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_11310 PF03466 LysR substrate binding domain K08M4_11320 PF01266 FAD dependent oxidoreductase K08M4_11330 PF01738 Dienelactone hydrolase family K08M4_11340 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_11350 PF00512 His Kinase A (phospho-acceptor) domain K08M4_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_11360 PF00072 Response regulator receiver domain K08M4_11360 PF00486 Transcriptional regulatory protein, C terminal K08M4_11370 PF00535 Glycosyl transferase family 2 K08M4_11380 PF02366 K08M4_11380 K08M4_11390 PF04138 K08M4_11390 K08M4_11400 PF04055 Radical SAM superfamily K08M4_11400 PF08497 K08M4_11400 K08M4_11400 PF11842 K08M4_11400 K08M4_11420 PF14056 K08M4_11420 K08M4_11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_11430 PF03466 LysR substrate binding domain K08M4_11440 PF01717 Cobalamin-independent synthase, Catalytic domain K08M4_11440 PF08267 Cobalamin-independent synthase, N-terminal domain K08M4_11450 PF16549 K08M4_11450 K08M4_11460 PF03795 YCII-related domain K08M4_11470 PF03061 Thioesterase superfamily K08M4_11480 PF04279 K08M4_11480 K08M4_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_11500 PF03466 LysR substrate binding domain K08M4_11510 PF00155 Aminotransferase class I and II K08M4_11520 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_11530 PF00072 Response regulator receiver domain K08M4_11530 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_11530 PF00512 His Kinase A (phospho-acceptor) domain K08M4_11530 PF01627 Hpt domain K08M4_11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_11530 PF13188 PAS domain K08M4_11540 PF00072 Response regulator receiver domain K08M4_11540 PF00563 EAL domain K08M4_11550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_11550 PF00672 HAMP domain K08M4_11580 PF00440 Bacterial regulatory proteins, tetR family K08M4_11590 PF01066 CDP-alcohol phosphatidyltransferase K08M4_11600 PF00005 ABC transporter K08M4_11620 PF13416 Bacterial extracellular solute-binding protein K08M4_11630 PF03724 META domain K08M4_11640 PF06945 K08M4_11640 K08M4_11660 PF01910 Domain of unknown function DUF77 K08M4_11680 PF00270 DEAD/DEAH box helicase K08M4_11680 PF00271 Helicase conserved C-terminal domain K08M4_11690 PF01810 K08M4_11690 K08M4_11710 PF00246 Zinc carboxypeptidase K08M4_11720 PF09493 K08M4_11720 K08M4_11730 PF05116 Sucrose-6F-phosphate phosphohydrolase K08M4_11740 PF00005 ABC transporter K08M4_11740 PF00571 CBS domain K08M4_11750 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_11760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M4_11770 PF12680 SnoaL-like domain K08M4_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_11780 PF03466 LysR substrate binding domain K08M4_11800 PF00005 ABC transporter K08M4_11800 PF00664 ABC transporter transmembrane region K08M4_11810 PF00005 ABC transporter K08M4_11810 PF00664 ABC transporter transmembrane region K08M4_11820 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_11840 PF00990 GGDEF domain K08M4_11860 PF10014 2OG-Fe dioxygenase K08M4_11870 PF00266 Aminotransferase class-V K08M4_11880 PF01965 DJ-1/PfpI family K08M4_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_11890 PF03466 LysR substrate binding domain K08M4_11900 PF00990 GGDEF domain K08M4_11910 PF10977 K08M4_11910 K08M4_11920 PF00990 GGDEF domain K08M4_11930 PF00939 Sodium:sulfate symporter transmembrane region K08M4_11940 PF02698 DUF218 domain K08M4_11950 PF00390 Malic enzyme, N-terminal domain K08M4_11950 PF03949 Malic enzyme, NAD binding domain K08M4_11960 PF00270 DEAD/DEAH box helicase K08M4_11960 PF00271 Helicase conserved C-terminal domain K08M4_11960 PF04408 Helicase associated domain (HA2) K08M4_11980 PF01259 SAICAR synthetase K08M4_11990 PF03846 Cell division inhibitor SulA K08M4_12010 PF08238 Sel1 repeat K08M4_12020 PF00691 OmpA family K08M4_12020 PF13488 K08M4_12020 K08M4_12030 PF10979 K08M4_12030 K08M4_12040 PF11813 K08M4_12040 K08M4_12050 PF01565 FAD binding domain K08M4_12050 PF02913 FAD linked oxidases, C-terminal domain K08M4_12050 PF13183 4Fe-4S dicluster domain K08M4_12060 PF04191 Phospholipid methyltransferase K08M4_12070 PF12119 K08M4_12070 K08M4_12090 PF00221 Aromatic amino acid lyase K08M4_12100 PF01175 Urocanase K08M4_12100 PF17391 K08M4_12100 K08M4_12100 PF17392 K08M4_12100 K08M4_12110 PF00491 Arginase family K08M4_12120 PF01979 Amidohydrolase family K08M4_12130 PF00392 Bacterial regulatory proteins, gntR family K08M4_12130 PF07702 UTRA domain K08M4_12140 PF07070 K08M4_12140 K08M4_12150 PF13391 K08M4_12150 K08M4_12180 PF06114 Domain of unknown function (DUF955) K08M4_12180 PF12844 Helix-turn-helix domain K08M4_12210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M4_12210 PF02824 TGS domain K08M4_12210 PF03129 Anticodon binding domain K08M4_12210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K08M4_12220 PF00707 Translation initiation factor IF-3, C-terminal domain K08M4_12220 PF05198 Translation initiation factor IF-3, N-terminal domain K08M4_12230 PF01632 Ribosomal protein L35 K08M4_12240 PF00453 Ribosomal protein L20 K08M4_12250 PF04266 ASCH domain K08M4_12270 PF00069 Protein kinase domain K08M4_12270 PF13855 Leucine rich repeat K08M4_12280 PF00005 ABC transporter K08M4_12290 PF00440 Bacterial regulatory proteins, tetR family K08M4_12300 PF00171 Aldehyde dehydrogenase family K08M4_12310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K08M4_12320 PF00491 Arginase family K08M4_12350 PF00474 Sodium:solute symporter family K08M4_12360 PF01081 KDPG and KHG aldolase K08M4_12370 PF00294 pfkB family carbohydrate kinase K08M4_12380 PF07883 Cupin domain K08M4_12390 PF05426 Alginate lyase K08M4_12390 PF07940 Heparinase II/III-like protein K08M4_12400 PF05426 Alginate lyase K08M4_12400 PF07940 Heparinase II/III-like protein K08M4_12410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_12410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M4_12420 PF01554 MatE K08M4_12430 PF00392 Bacterial regulatory proteins, gntR family K08M4_12430 PF07729 FCD domain K08M4_12440 PF00392 Bacterial regulatory proteins, gntR family K08M4_12440 PF07729 FCD domain K08M4_12450 PF00571 CBS domain K08M4_12450 PF03445 K08M4_12450 K08M4_12450 PF10335 K08M4_12450 K08M4_12460 PF00929 Exonuclease K08M4_12470 PF06178 Oligogalacturonate-specific porin protein (KdgM) K08M4_12480 PF00474 Sodium:solute symporter family K08M4_12490 PF01625 Peptide methionine sulfoxide reductase K08M4_12500 PF01926 50S ribosome-binding GTPase K08M4_12500 PF05128 K08M4_12500 K08M4_12510 PF01926 50S ribosome-binding GTPase K08M4_12520 PF01212 Beta-eliminating lyase K08M4_12530 PF03466 LysR substrate binding domain K08M4_12550 PF07876 Stress responsive A/B Barrel Domain K08M4_12560 PF11301 K08M4_12560 K08M4_12570 PF13508 Acetyltransferase (GNAT) domain K08M4_12590 PF04237 YjbR K08M4_12600 PF00939 Sodium:sulfate symporter transmembrane region K08M4_12610 PF00027 Cyclic nucleotide-binding domain K08M4_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_12620 PF00072 Response regulator receiver domain K08M4_12650 PF01965 DJ-1/PfpI family K08M4_12660 PF12688 Tetratrico peptide repeat K08M4_12660 PF13673 Acetyltransferase (GNAT) domain K08M4_12670 PF01717 Cobalamin-independent synthase, Catalytic domain K08M4_12680 PF08908 K08M4_12680 K08M4_12690 PF01925 K08M4_12690 K08M4_12700 PF04307 K08M4_12700 K08M4_12710 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K08M4_12720 PF01810 K08M4_12720 K08M4_12730 PF01235 K08M4_12730 K08M4_12770 PF01235 K08M4_12770 K08M4_12790 PF00216 Bacterial DNA-binding protein K08M4_12810 PF08856 K08M4_12810 K08M4_12820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_12830 PF08279 HTH domain K08M4_12830 PF13280 K08M4_12830 K08M4_12840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_12840 PF00672 HAMP domain K08M4_12840 PF02743 Cache domain K08M4_12850 PF10000 ACT domain K08M4_12850 PF13840 ACT domain K08M4_12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_12860 PF03466 LysR substrate binding domain K08M4_12870 PF00753 Metallo-beta-lactamase superfamily K08M4_12880 PF02668 Taurine catabolism dioxygenase TauD, TfdA family K08M4_12890 PF00072 Response regulator receiver domain K08M4_12890 PF00512 His Kinase A (phospho-acceptor) domain K08M4_12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_12900 PF00155 Aminotransferase class I and II K08M4_12910 PF00155 Aminotransferase class I and II K08M4_12910 PF00392 Bacterial regulatory proteins, gntR family K08M4_12920 PF00892 EamA-like transporter family K08M4_12930 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M4_12940 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_12950 PF00216 Bacterial DNA-binding protein K08M4_12970 PF05724 Thiopurine S-methyltransferase (TPMT) K08M4_12980 PF01370 NAD dependent epimerase/dehydratase family K08M4_12980 PF02222 ATP-grasp domain K08M4_12990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_12990 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_13000 PF04172 K08M4_13000 K08M4_13010 PF03788 K08M4_13010 K08M4_13020 PF00929 Exonuclease K08M4_13020 PF08411 Exonuclease C-terminal K08M4_13030 PF04116 K08M4_13030 K08M4_13040 PF10974 K08M4_13040 K08M4_13050 PF12625 K08M4_13050 K08M4_13050 PF12833 Helix-turn-helix domain K08M4_13060 PF09831 K08M4_13060 K08M4_13070 PF02698 DUF218 domain K08M4_13090 PF00375 Sodium:dicarboxylate symporter family K08M4_13100 PF08732 K08M4_13100 K08M4_13110 PF01613 Flavin reductase like domain K08M4_13120 PF02277 Phosphoribosyltransferase K08M4_13130 PF02654 K08M4_13130 K08M4_13140 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase K08M4_13150 PF00300 Histidine phosphatase superfamily (branch 1) K08M4_13160 PF01432 Peptidase family M3 K08M4_13160 PF08439 Oligopeptidase F K08M4_13170 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M4_13180 PF01032 FecCD transport family K08M4_13190 PF00005 ABC transporter K08M4_13210 PF03067 Chitin binding domain K08M4_13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_13240 PF03466 LysR substrate binding domain K08M4_13250 PF00753 Metallo-beta-lactamase superfamily K08M4_13280 PF00583 Acetyltransferase (GNAT) family K08M4_13290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K08M4_13300 PF00990 GGDEF domain K08M4_13300 PF01590 GAF domain K08M4_13310 PF07209 K08M4_13310 K08M4_13320 PF07690 Major Facilitator Superfamily K08M4_13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_13330 PF03466 LysR substrate binding domain K08M4_13340 PF00462 Glutaredoxin K08M4_13350 PF01863 Protein of unknown function DUF45 K08M4_13360 PF05971 Protein of unknown function (DUF890) K08M4_13370 PF13424 Tetratricopeptide repeat K08M4_13370 PF13432 Tetratricopeptide repeat K08M4_13380 PF04204 Homoserine O-succinyltransferase K08M4_13390 PF13671 AAA domain K08M4_13400 PF12975 Domain of unknown function (DUF3859) K08M4_13410 PF01546 Peptidase family M20/M25/M40 K08M4_13410 PF07687 Peptidase dimerisation domain K08M4_13430 PF10881 K08M4_13430 K08M4_13450 PF00589 Phage integrase family K08M4_13450 PF13356 Domain of unknown function (DUF4102) K08M4_13450 PF14659 Phage integrase, N-terminal SAM-like domain K08M4_13460 PF05930 Prophage CP4-57 regulatory protein (AlpA) K08M4_13480 PF11726 K08M4_13480 K08M4_13500 PF00589 Phage integrase family K08M4_13510 PF10980 Protein of unknown function (DUF2787) K08M4_13520 PF10980 Protein of unknown function (DUF2787) K08M4_13530 PF04002 RadC-like JAB domain K08M4_13540 PF00075 RNase H K08M4_13550 PF05930 Prophage CP4-57 regulatory protein (AlpA) K08M4_13560 PF04927 K08M4_13560 K08M4_13600 PF13391 K08M4_13600 K08M4_13610 PF13280 K08M4_13610 K08M4_13620 PF12128 K08M4_13620 K08M4_13660 PF00271 Helicase conserved C-terminal domain K08M4_13660 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) K08M4_13660 PF04851 Type III restriction enzyme, res subunit K08M4_13660 PF08463 K08M4_13660 K08M4_13660 PF13643 K08M4_13660 K08M4_13670 PF02384 N-6 DNA Methylase K08M4_13670 PF12161 HsdM N-terminal domain K08M4_13680 PF01420 Type I restriction modification DNA specificity domain K08M4_13690 PF13304 AAA domain K08M4_13710 PF13175 AAA ATPase domain K08M4_13730 PF07728 AAA domain (dynein-related subfamily) K08M4_13740 PF10117 K08M4_13740 K08M4_13760 PF00709 Adenylosuccinate synthetase K08M4_13770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_13770 PF03466 LysR substrate binding domain K08M4_13780 PF01545 Cation efflux family K08M4_13790 PF01047 MarR family K08M4_13800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_13820 PF03466 LysR substrate binding domain K08M4_13830 PF00593 TonB dependent receptor K08M4_13830 PF07715 TonB-dependent Receptor Plug Domain K08M4_13840 PF13649 Methyltransferase domain K08M4_13850 PF00583 Acetyltransferase (GNAT) family K08M4_13860 PF01810 K08M4_13860 K08M4_13870 PF13505 Outer membrane protein beta-barrel domain K08M4_13880 PF00149 Calcineurin-like phosphoesterase K08M4_13880 PF12320 Type 5 capsule protein repressor C-terminal domain K08M4_13890 PF13558 Putative exonuclease SbcCD, C subunit K08M4_13920 PF01163 RIO1 family K08M4_13930 PF00106 short chain dehydrogenase K08M4_13940 PF04244 Deoxyribodipyrimidine photo-lyase-related protein K08M4_13950 PF00582 Universal stress protein family K08M4_13960 PF14284 K08M4_13960 K08M4_13980 PF00583 Acetyltransferase (GNAT) family K08M4_13990 PF11730 K08M4_13990 K08M4_14000 PF07690 Major Facilitator Superfamily K08M4_14010 PF03009 Glycerophosphoryl diester phosphodiesterase family K08M4_14020 PF04266 ASCH domain K08M4_14030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_14030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_14040 PF13419 Haloacid dehalogenase-like hydrolase K08M4_14050 PF08241 Methyltransferase domain K08M4_14060 PF11964 SpoIIAA-like K08M4_14070 PF00293 NUDIX domain K08M4_14080 PF03692 K08M4_14080 K08M4_14100 PF00849 RNA pseudouridylate synthase K08M4_14110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_14130 PF04828 Glutathione-dependent formaldehyde-activating enzyme K08M4_14170 PF03737 Demethylmenaquinone methyltransferase K08M4_14180 PF00583 Acetyltransferase (GNAT) family K08M4_14200 PF06042 Bacterial protein of unknown function (DUF925) K08M4_14210 PF00293 NUDIX domain K08M4_14240 PF00583 Acetyltransferase (GNAT) family K08M4_14250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_14260 PF13023 HD domain K08M4_14270 PF03625 Domain of unknown function DUF302 K08M4_14300 PF02810 SEC-C motif K08M4_14310 PF12680 SnoaL-like domain K08M4_14320 PF13561 Enoyl-(Acyl carrier protein) reductase K08M4_14330 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_14340 PF07073 Modulator of Rho-dependent transcription termination (ROF) K08M4_14360 PF14526 Integron-associated effector binding protein K08M4_14370 PF13410 Glutathione S-transferase, C-terminal domain K08M4_14370 PF13417 Glutathione S-transferase, N-terminal domain K08M4_14380 PF01136 K08M4_14380 K08M4_14380 PF12392 K08M4_14380 K08M4_14390 PF13279 Thioesterase-like superfamily K08M4_14400 PF00005 ABC transporter K08M4_14400 PF00664 ABC transporter transmembrane region K08M4_14410 PF00005 ABC transporter K08M4_14420 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_14430 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_14440 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_14450 PF00589 Phage integrase family K08M4_14450 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_14460 PF04986 K08M4_14460 K08M4_14460 PF14319 K08M4_14460 K08M4_14500 PF08867 K08M4_14500 K08M4_14520 PF08241 Methyltransferase domain K08M4_14540 PF13302 Acetyltransferase (GNAT) domain K08M4_14560 PF08818 Domain of unknown function (DU1801) K08M4_14590 PF02694 K08M4_14590 K08M4_14610 PF02321 Outer membrane efflux protein K08M4_14620 PF00873 AcrB/AcrD/AcrF family K08M4_14630 PF16576 K08M4_14630 K08M4_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_14640 PF03466 LysR substrate binding domain K08M4_14660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_14660 PF00672 HAMP domain K08M4_14670 PF02397 K08M4_14670 K08M4_14680 PF13641 Glycosyltransferase like family 2 K08M4_14690 PF00534 Glycosyl transferases group 1 K08M4_14690 PF13439 Glycosyltransferase Family 4 K08M4_14700 PF02706 Chain length determinant protein K08M4_14710 PF13692 Glycosyl transferases group 1 K08M4_14720 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_14720 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_14730 PF04932 K08M4_14730 K08M4_14740 PF00534 Glycosyl transferases group 1 K08M4_14740 PF13579 Glycosyl transferase 4-like domain K08M4_14750 PF00072 Response regulator receiver domain K08M4_14750 PF00158 Sigma-54 interaction domain K08M4_14750 PF02954 Bacterial regulatory protein, Fis family K08M4_14760 PF01627 Hpt domain K08M4_14770 PF00005 ABC transporter K08M4_14780 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_14790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M4_14820 PF02563 Polysaccharide biosynthesis/export protein K08M4_14820 PF10531 SLBB domain K08M4_14830 PF00691 OmpA family K08M4_14840 PF01740 STAS domain K08M4_14850 PF01068 ATP dependent DNA ligase domain K08M4_14850 PF14743 DNA ligase OB-like domain K08M4_14860 PF01554 MatE K08M4_14870 PF00677 Lumazine binding domain K08M4_14880 PF14255 K08M4_14880 K08M4_14890 PF03881 Fructosamine kinase K08M4_14900 PF12290 K08M4_14900 K08M4_14910 PF00877 NlpC/P60 family K08M4_14920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_14930 PF04116 K08M4_14930 K08M4_14940 PF03942 K08M4_14940 K08M4_14950 PF00480 ROK family K08M4_14960 PF11173 K08M4_14960 K08M4_14970 PF00994 Probable molybdopterin binding domain K08M4_14970 PF03205 Molybdopterin guanine dinucleotide synthesis protein B K08M4_14970 PF03453 MoeA N-terminal region (domain I and II) K08M4_14970 PF03454 MoeA C-terminal region (domain IV) K08M4_14980 PF12804 MobA-like NTP transferase domain K08M4_14990 PF00005 ABC transporter K08M4_15000 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_15010 PF12849 PBP superfamily domain K08M4_15020 PF00072 Response regulator receiver domain K08M4_15020 PF00158 Sigma-54 interaction domain K08M4_15020 PF02954 Bacterial regulatory protein, Fis family K08M4_15030 PF00512 His Kinase A (phospho-acceptor) domain K08M4_15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_15030 PF17202 K08M4_15030 K08M4_15040 PF00924 Mechanosensitive ion channel K08M4_15050 PF13401 AAA domain K08M4_15060 PF00005 ABC transporter K08M4_15060 PF12848 ABC transporter K08M4_15070 PF02634 FdhD/NarQ family K08M4_15080 PF11749 K08M4_15080 K08M4_15090 PF11748 K08M4_15090 K08M4_15100 PF00037 4Fe-4S binding domain K08M4_15100 PF12838 4Fe-4S dicluster domain K08M4_15110 PF02613 Nitrate reductase delta subunit K08M4_15120 PF10518 TAT (twin-arginine translocation) pathway signal sequence K08M4_15130 PF00384 Molybdopterin oxidoreductase K08M4_15130 PF01568 Molydopterin dinucleotide binding domain K08M4_15130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M4_15140 PF13247 4Fe-4S dicluster domain K08M4_15150 PF01292 Prokaryotic cytochrome b561 K08M4_15170 PF00909 Ammonium Transporter Family K08M4_15180 PF02146 Sir2 family K08M4_15190 PF00990 GGDEF domain K08M4_15200 PF13416 Bacterial extracellular solute-binding protein K08M4_15210 PF13416 Bacterial extracellular solute-binding protein K08M4_15220 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_15230 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_15240 PF00005 ABC transporter K08M4_15240 PF08402 TOBE domain K08M4_15260 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K08M4_15270 PF11205 K08M4_15270 K08M4_15280 PF01171 PP-loop family K08M4_15290 PF00582 Universal stress protein family K08M4_15300 PF00027 Cyclic nucleotide-binding domain K08M4_15300 PF13545 Crp-like helix-turn-helix domain K08M4_15310 PF13386 K08M4_15310 K08M4_15320 PF03597 K08M4_15320 K08M4_15330 PF00122 E1-E2 ATPase K08M4_15330 PF00403 Heavy-metal-associated domain K08M4_15330 PF00702 haloacid dehalogenase-like hydrolase K08M4_15330 PF12156 K08M4_15330 K08M4_15340 PF05751 K08M4_15340 K08M4_15350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_15350 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K08M4_15360 PF05545 K08M4_15360 K08M4_15370 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO K08M4_15380 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M4_15400 PF08495 K08M4_15400 K08M4_15400 PF10442 K08M4_15400 K08M4_15410 PF00072 Response regulator receiver domain K08M4_15410 PF00512 His Kinase A (phospho-acceptor) domain K08M4_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_15430 PF05016 Plasmid stabilisation system protein K08M4_15440 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system K08M4_15500 PF13551 Winged helix-turn helix K08M4_15500 PF13592 K08M4_15500 K08M4_15510 PF13358 DDE superfamily endonuclease K08M4_15520 PF13505 Outer membrane protein beta-barrel domain K08M4_15530 PF11185 K08M4_15530 K08M4_15550 PF12321 K08M4_15550 K08M4_15560 PF06303 Organiser of macrodomain of Terminus of chromosome K08M4_15560 PF17414 K08M4_15560 K08M4_15570 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M4_15570 PF13654 AAA domain K08M4_15580 PF07977 FabA-like domain K08M4_15590 PF04957 Ribosome modulation factor K08M4_15600 PF11949 K08M4_15600 K08M4_15610 PF00005 ABC transporter K08M4_15610 PF12848 ABC transporter K08M4_15610 PF16326 K08M4_15610 K08M4_15620 PF05768 Glutaredoxin-like domain (DUF836) K08M4_15630 PF01170 Putative RNA methylase family UPF0020 K08M4_15630 PF02926 THUMP domain K08M4_15630 PF10672 S-adenosylmethionine-dependent methyltransferase K08M4_15640 PF07126 K08M4_15640 K08M4_15650 PF01180 Dihydroorotate dehydrogenase K08M4_15660 PF05088 K08M4_15660 K08M4_15670 PF11197 K08M4_15670 K08M4_15680 PF01433 Peptidase family M1 K08M4_15680 PF11940 Domain of unknown function (DUF3458) K08M4_15680 PF17432 K08M4_15680 K08M4_15700 PF00595 PDZ domain (Also known as DHR or GLGF) K08M4_15700 PF03572 Peptidase family S41 K08M4_15700 PF08180 K08M4_15700 K08M4_15700 PF11818 K08M4_15700 K08M4_15710 PF04352 ProQ/FINO family K08M4_15710 PF17516 K08M4_15710 K08M4_15720 PF13185 GAF domain K08M4_15730 PF00005 ABC transporter K08M4_15730 PF00664 ABC transporter transmembrane region K08M4_15740 PF04403 K08M4_15740 K08M4_15750 PF02470 K08M4_15750 K08M4_15760 PF01189 NOL1/NOP2/sun family K08M4_15760 PF13636 pre-rRNA processing and ribosome biogenesis K08M4_15760 PF17125 K08M4_15760 K08M4_15770 PF13509 S1 domain K08M4_15790 PF14539 Domain of unknown function (DUF4442) K08M4_15800 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_15810 PF00793 DAHP synthetase I family K08M4_15820 PF04461 Protein of unknown function (DUF520) K08M4_15830 PF10414 Sirohaem synthase dimerisation region K08M4_15830 PF13241 Putative NAD(P)-binding K08M4_15830 PF14824 Sirohaem biosynthesis protein central K08M4_15840 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_15850 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_15860 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_15870 PF00005 ABC transporter K08M4_15880 PF01027 Inhibitor of apoptosis-promoting Bax1 K08M4_15890 PF04358 DsrC like protein K08M4_15900 PF00708 Acylphosphatase K08M4_15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_15920 PF10672 S-adenosylmethionine-dependent methyltransferase K08M4_15930 PF03160 Calx-beta domain K08M4_15930 PF12245 Bacterial Ig-like domain (group 3) K08M4_15930 PF13519 von Willebrand factor type A domain K08M4_15940 PF02321 Outer membrane efflux protein K08M4_15950 PF00691 OmpA family K08M4_15960 PF11042 K08M4_15960 K08M4_15970 PF00990 GGDEF domain K08M4_15970 PF13181 Tetratricopeptide repeat K08M4_15970 PF13424 Tetratricopeptide repeat K08M4_15980 PF06508 Queuosine biosynthesis protein QueC K08M4_15990 PF04055 Radical SAM superfamily K08M4_15990 PF13394 4Fe-4S single cluster domain K08M4_16000 PF08282 haloacid dehalogenase-like hydrolase K08M4_16010 PF00293 NUDIX domain K08M4_16010 PF01569 PAP2 superfamily K08M4_16020 PF00583 Acetyltransferase (GNAT) family K08M4_16050 PF00501 AMP-binding enzyme K08M4_16050 PF13193 AMP-binding enzyme C-terminal domain K08M4_16050 PF16177 K08M4_16050 K08M4_16060 PF04303 PrpF protein K08M4_16070 PF00330 Aconitase family (aconitate hydratase) K08M4_16070 PF00694 Aconitase C-terminal domain K08M4_16080 PF00285 Citrate synthase K08M4_16090 PF13714 Phosphoenolpyruvate phosphomutase K08M4_16100 PF00392 Bacterial regulatory proteins, gntR family K08M4_16100 PF07729 FCD domain K08M4_16110 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_16110 PF13487 HD domain K08M4_16120 PF03401 Tripartite tricarboxylate transporter family receptor K08M4_16130 PF07331 K08M4_16130 K08M4_16140 PF01970 K08M4_16140 K08M4_16150 PF01925 K08M4_16150 K08M4_16170 PF09905 Uncharacterized conserved protein (DUF2132) K08M4_16180 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K08M4_16180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_16190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K08M4_16200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K08M4_16200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K08M4_16210 PF00072 Response regulator receiver domain K08M4_16210 PF12431 K08M4_16210 K08M4_16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_16220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain K08M4_16220 PF17203 K08M4_16220 K08M4_16240 PF02321 Outer membrane efflux protein K08M4_16250 PF13437 HlyD family secretion protein K08M4_16250 PF13533 Biotin-lipoyl like K08M4_16260 PF12698 ABC-2 family transporter protein K08M4_16270 PF12698 ABC-2 family transporter protein K08M4_16280 PF03061 Thioesterase superfamily K08M4_16290 PF02001 K08M4_16290 K08M4_16300 PF04400 K08M4_16300 K08M4_16310 PF02579 Dinitrogenase iron-molybdenum cofactor K08M4_16360 PF14317 K08M4_16360 K08M4_16370 PF08238 Sel1 repeat K08M4_16450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M4_16460 PF02152 Dihydroneopterin aldolase K08M4_16470 PF01227 GTP cyclohydrolase I K08M4_16480 PF13561 Enoyl-(Acyl carrier protein) reductase K08M4_16500 PF01734 Patatin-like phospholipase K08M4_16520 PF11840 K08M4_16520 K08M4_16530 PF06779 K08M4_16530 K08M4_16540 PF13417 Glutathione S-transferase, N-terminal domain K08M4_16560 PF13391 K08M4_16560 K08M4_16570 PF10592 K08M4_16570 K08M4_16580 PF01588 Putative tRNA binding domain K08M4_16580 PF03147 Ferredoxin-fold anticodon binding domain K08M4_16580 PF03483 B3/4 domain K08M4_16580 PF03484 tRNA synthetase B5 domain K08M4_16590 PF01409 tRNA synthetases class II core domain (F) K08M4_16590 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K08M4_16600 PF00990 GGDEF domain K08M4_16600 PF01814 Hemerythrin HHE cation binding domain K08M4_16620 PF17131 K08M4_16620 K08M4_16630 PF03176 MMPL family K08M4_16640 PF00440 Bacterial regulatory proteins, tetR family K08M4_16670 PF13505 Outer membrane protein beta-barrel domain K08M4_16680 PF00270 DEAD/DEAH box helicase K08M4_16680 PF00271 Helicase conserved C-terminal domain K08M4_16680 PF04408 Helicase associated domain (HA2) K08M4_16680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K08M4_16680 PF11898 K08M4_16680 K08M4_16690 PF00933 Glycosyl hydrolase family 3 N terminal domain K08M4_16690 PF01915 Glycosyl hydrolase family 3 C-terminal domain K08M4_16690 PF14310 Fibronectin type III-like domain K08M4_16710 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_16720 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_16730 PF01547 Bacterial extracellular solute-binding protein K08M4_16740 PF00356 Bacterial regulatory proteins, lacI family K08M4_16740 PF13377 Periplasmic binding protein-like domain K08M4_16750 PF17167 K08M4_16750 K08M4_16760 PF00005 ABC transporter K08M4_16760 PF08402 TOBE domain K08M4_16790 PF06629 K08M4_16790 K08M4_16820 PF05099 Tellurite resistance protein TerB K08M4_16830 PF00929 Exonuclease K08M4_16840 PF00990 GGDEF domain K08M4_16840 PF03924 CHASE domain K08M4_16850 PF10816 K08M4_16850 K08M4_16860 PF00012 Hsp70 protein K08M4_16870 PF00012 Hsp70 protein K08M4_16870 PF12531 K08M4_16870 K08M4_16890 PF11163 K08M4_16890 K08M4_16900 PF13302 Acetyltransferase (GNAT) domain K08M4_16910 PF00158 Sigma-54 interaction domain K08M4_16910 PF00989 PAS fold K08M4_16920 PF05128 K08M4_16920 K08M4_16930 PF04317 K08M4_16930 K08M4_16950 PF05681 K08M4_16950 K08M4_16950 PF05683 Fumarase C-terminus K08M4_16960 PF00425 chorismate binding enzyme K08M4_16960 PF04715 Anthranilate synthase component I, N terminal region K08M4_16970 PF13505 Outer membrane protein beta-barrel domain K08M4_16980 PF00072 Response regulator receiver domain K08M4_16980 PF00512 His Kinase A (phospho-acceptor) domain K08M4_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_16990 PF07700 Heme NO binding K08M4_17000 PF00293 NUDIX domain K08M4_17020 PF03222 Tryptophan/tyrosine permease family K08M4_17030 PF03313 K08M4_17030 K08M4_17030 PF03315 Serine dehydratase beta chain K08M4_17040 PF03222 Tryptophan/tyrosine permease family K08M4_17060 PF01242 6-pyruvoyl tetrahydropterin synthase K08M4_17070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_17080 PF00916 K08M4_17080 K08M4_17090 PF00152 tRNA synthetases class II (D, K and N) K08M4_17090 PF01336 OB-fold nucleic acid binding domain K08M4_17120 PF00155 Aminotransferase class I and II K08M4_17120 PF00392 Bacterial regulatory proteins, gntR family K08M4_17140 PF13487 HD domain K08M4_17150 PF00092 von Willebrand factor type A domain K08M4_17170 PF13385 Concanavalin A-like lectin/glucanases superfamily K08M4_17180 PF00155 Aminotransferase class I and II K08M4_17190 PF13505 Outer membrane protein beta-barrel domain K08M4_17200 PF00027 Cyclic nucleotide-binding domain K08M4_17200 PF00571 CBS domain K08M4_17200 PF03445 K08M4_17200 K08M4_17200 PF10335 K08M4_17200 K08M4_17210 PF00929 Exonuclease K08M4_17220 PF03473 MOSC domain K08M4_17220 PF03475 3-alpha domain K08M4_17230 PF00266 Aminotransferase class-V K08M4_17240 PF06097 K08M4_17240 K08M4_17250 PF00027 Cyclic nucleotide-binding domain K08M4_17250 PF00512 His Kinase A (phospho-acceptor) domain K08M4_17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_17260 PF00072 Response regulator receiver domain K08M4_17280 PF04993 TfoX N-terminal domain K08M4_17280 PF04994 TfoX C-terminal domain K08M4_17290 PF08668 HDOD domain K08M4_17300 PF03956 K08M4_17300 K08M4_17320 PF00282 Pyridoxal-dependent decarboxylase conserved domain K08M4_17340 PF01380 SIS domain K08M4_17340 PF01418 Helix-turn-helix domain, rpiR family K08M4_17350 PF00465 Iron-containing alcohol dehydrogenase K08M4_17360 PF00462 Glutaredoxin K08M4_17370 PF02080 TrkA-C domain K08M4_17370 PF06826 K08M4_17370 K08M4_17380 PF07055 Enoyl reductase FAD binding domain K08M4_17380 PF12241 Trans-2-enoyl-CoA reductase catalytic region K08M4_17380 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K08M4_17390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M4_17390 PF02770 Acyl-CoA dehydrogenase, middle domain K08M4_17390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M4_17390 PF09317 K08M4_17390 K08M4_17400 PF00440 Bacterial regulatory proteins, tetR family K08M4_17430 PF02321 Outer membrane efflux protein K08M4_17440 PF00691 OmpA family K08M4_17450 PF06965 Na+/H+ antiporter 1 K08M4_17460 PF07143 Hydroxyneurosporene synthase (CrtC) K08M4_17460 PF17186 K08M4_17460 K08M4_17470 PF02687 K08M4_17470 K08M4_17480 PF00005 ABC transporter K08M4_17490 PF01554 MatE K08M4_17500 PF01370 NAD dependent epimerase/dehydratase family K08M4_17500 PF11066 K08M4_17500 K08M4_17510 PF11140 K08M4_17510 K08M4_17520 PF07690 Major Facilitator Superfamily K08M4_17530 PF00849 RNA pseudouridylate synthase K08M4_17530 PF01479 S4 domain K08M4_17540 PF00271 Helicase conserved C-terminal domain K08M4_17540 PF04851 Type III restriction enzyme, res subunit K08M4_17550 PF00563 EAL domain K08M4_17550 PF00990 GGDEF domain K08M4_17570 PF00072 Response regulator receiver domain K08M4_17570 PF00486 Transcriptional regulatory protein, C terminal K08M4_17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_17600 PF09335 K08M4_17600 K08M4_17600 PF14067 K08M4_17600 K08M4_17610 PF00535 Glycosyl transferase family 2 K08M4_17620 PF01386 Ribosomal L25p family K08M4_17650 PF11903 K08M4_17650 K08M4_17660 PF15781 K08M4_17660 K08M4_17670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_17680 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system K08M4_17690 PF05016 Plasmid stabilisation system protein K08M4_17700 PF00589 Phage integrase family K08M4_17700 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_17740 PF04986 K08M4_17740 K08M4_17740 PF14319 K08M4_17740 K08M4_17750 PF00589 Phage integrase family K08M4_17750 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_17760 PF04986 K08M4_17760 K08M4_17760 PF14319 K08M4_17760 K08M4_17770 PF00589 Phage integrase family K08M4_17770 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_17780 PF00589 Phage integrase family K08M4_17780 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_17790 PF00067 Cytochrome P450 K08M4_17800 PF11948 K08M4_17800 K08M4_17810 PF10985 K08M4_17810 K08M4_17840 PF00268 Ribonucleotide reductase, small chain K08M4_17850 PF00317 Ribonucleotide reductase, all-alpha domain K08M4_17850 PF02867 Ribonucleotide reductase, barrel domain K08M4_17850 PF08343 Ribonucleotide reductase N-terminal K08M4_17860 PF07972 NrdI Flavodoxin like K08M4_17870 PF00462 Glutaredoxin K08M4_17880 PF01521 Iron-sulphur cluster biosynthesis K08M4_17900 PF01458 Uncharacterized protein family (UPF0051) K08M4_17930 PF02657 Fe-S metabolism associated domain K08M4_17940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_17940 PF00672 HAMP domain K08M4_17940 PF02743 Cache domain K08M4_17950 PF02028 BCCT family transporter K08M4_17960 PF02028 BCCT family transporter K08M4_17970 PF00072 Response regulator receiver domain K08M4_17970 PF00196 Bacterial regulatory proteins, luxR family K08M4_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_17980 PF07730 Histidine kinase K08M4_17980 PF17200 K08M4_17980 K08M4_17990 PF06808 K08M4_17990 K08M4_18000 PF04290 K08M4_18000 K08M4_18010 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M4_18030 PF11201 K08M4_18030 K08M4_18040 PF00753 Metallo-beta-lactamase superfamily K08M4_18050 PF05951 K08M4_18050 K08M4_18060 PF01471 Putative peptidoglycan binding domain K08M4_18060 PF03734 L,D-transpeptidase catalytic domain K08M4_18070 PF07433 K08M4_18070 K08M4_18080 PF09375 Imelysin K08M4_18090 PF06537 K08M4_18090 K08M4_18100 PF09375 Imelysin K08M4_18110 PF00925 GTP cyclohydrolase II K08M4_18130 PF03918 Cytochrome C biogenesis protein K08M4_18140 PF08534 Redoxin K08M4_18150 PF01578 K08M4_18150 K08M4_18150 PF16327 K08M4_18150 K08M4_18160 PF03916 K08M4_18160 K08M4_18170 PF13247 4Fe-4S dicluster domain K08M4_18180 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) K08M4_18190 PF02335 Cytochrome c552 K08M4_18200 PF00581 Rhodanese-like domain K08M4_18210 PF13414 TPR repeat K08M4_18220 PF00521 DNA gyrase/topoisomerase IV, subunit A K08M4_18220 PF03989 DNA gyrase C-terminal domain, beta-propeller K08M4_18230 PF13489 Methyltransferase domain K08M4_18240 PF00317 Ribonucleotide reductase, all-alpha domain K08M4_18240 PF02867 Ribonucleotide reductase, barrel domain K08M4_18240 PF03477 ATP cone domain K08M4_18250 PF00268 Ribonucleotide reductase, small chain K08M4_18260 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_18270 PF00994 Probable molybdopterin binding domain K08M4_18280 PF13084 K08M4_18280 K08M4_18290 PF13740 ACT domain K08M4_18300 PF07603 K08M4_18300 K08M4_18310 PF07603 K08M4_18310 K08M4_18330 PF03435 Saccharopine dehydrogenase K08M4_18330 PF16653 K08M4_18330 K08M4_18340 PF00202 Aminotransferase class-III K08M4_18340 PF00282 Pyridoxal-dependent decarboxylase conserved domain K08M4_18390 PF01066 CDP-alcohol phosphatidyltransferase K08M4_18400 PF01541 GIY-YIG catalytic domain K08M4_18400 PF02151 UvrB/uvrC motif K08M4_18400 PF08459 UvrC Helix-hairpin-helix N-terminal K08M4_18400 PF14520 Helix-hairpin-helix domain K08M4_18410 PF00072 Response regulator receiver domain K08M4_18410 PF00196 Bacterial regulatory proteins, luxR family K08M4_18420 PF00136 DNA polymerase family B K08M4_18420 PF03104 DNA polymerase family B, exonuclease domain K08M4_18440 PF01132 Elongation factor P (EF-P) OB domain K08M4_18440 PF08207 Elongation factor P (EF-P) KOW-like domain K08M4_18440 PF09285 Elongation factor P, C-terminal K08M4_18450 PF04269 Protein of unknown function, DUF440 K08M4_18460 PF00588 SpoU rRNA Methylase family K08M4_18470 PF00849 RNA pseudouridylate synthase K08M4_18470 PF01479 S4 domain K08M4_18480 PF01300 Telomere recombination K08M4_18490 PF02811 PHP domain K08M4_18500 PF08056 K08M4_18500 K08M4_18510 PF00425 chorismate binding enzyme K08M4_18510 PF04715 Anthranilate synthase component I, N terminal region K08M4_18520 PF00117 Glutamine amidotransferase class-I K08M4_18530 PF00591 Glycosyl transferase family, a/b domain K08M4_18530 PF02885 Glycosyl transferase family, helical bundle domain K08M4_18540 PF00218 Indole-3-glycerol phosphate synthase K08M4_18540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K08M4_18550 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_18560 PF00290 Tryptophan synthase alpha chain K08M4_18570 PF00375 Sodium:dicarboxylate symporter family K08M4_18580 PF01609 Transposase DDE domain K08M4_18580 PF13006 K08M4_18580 K08M4_18590 PF10672 S-adenosylmethionine-dependent methyltransferase K08M4_18600 PF00849 RNA pseudouridylate synthase K08M4_18610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_18610 PF00672 HAMP domain K08M4_18620 PF00209 Sodium:neurotransmitter symporter family K08M4_18630 PF13091 PLD-like domain K08M4_18630 PF13396 K08M4_18630 K08M4_18640 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M4_18650 PF03352 Methyladenine glycosylase K08M4_18660 PF00873 AcrB/AcrD/AcrF family K08M4_18670 PF13437 HlyD family secretion protein K08M4_18670 PF13533 Biotin-lipoyl like K08M4_18680 PF13437 HlyD family secretion protein K08M4_18680 PF13533 Biotin-lipoyl like K08M4_18690 PF04024 K08M4_18690 K08M4_18700 PF06667 K08M4_18700 K08M4_18710 PF04012 K08M4_18710 K08M4_18720 PF00158 Sigma-54 interaction domain K08M4_18720 PF02954 Bacterial regulatory protein, Fis family K08M4_18730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_18740 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_18750 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_18750 PF12911 K08M4_18750 K08M4_18760 PF00005 ABC transporter K08M4_18760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_18770 PF00005 ABC transporter K08M4_18780 PF11150 K08M4_18780 K08M4_18790 PF11042 K08M4_18790 K08M4_18800 PF01368 DHH family K08M4_18800 PF02833 DHHA2 domain K08M4_18810 PF11449 K08M4_18810 K08M4_18820 PF00384 Molybdopterin oxidoreductase K08M4_18820 PF01568 Molydopterin dinucleotide binding domain K08M4_18830 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M4_18840 PF06796 K08M4_18840 K08M4_18850 PF03649 K08M4_18850 K08M4_18860 PF01226 Formate/nitrite transporter K08M4_18880 PF06146 K08M4_18880 K08M4_18890 PF13460 NADH(P)-binding K08M4_18900 PF02698 DUF218 domain K08M4_18910 PF00265 Thymidine kinase K08M4_18920 PF01406 tRNA synthetases class I (C) catalytic domain K08M4_18920 PF09190 DALR domain K08M4_18930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_18940 PF12850 Calcineurin-like phosphoesterase superfamily domain K08M4_18950 PF00563 EAL domain K08M4_18950 PF08668 HDOD domain K08M4_18960 PF02810 SEC-C motif K08M4_18970 PF01502 Phosphoribosyl-AMP cyclohydrolase K08M4_18970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K08M4_18980 PF00977 Histidine biosynthesis protein K08M4_18990 PF00977 Histidine biosynthesis protein K08M4_19000 PF00117 Glutamine amidotransferase class-I K08M4_19010 PF00475 Imidazoleglycerol-phosphate dehydratase K08M4_19010 PF08645 Polynucleotide kinase 3 phosphatase K08M4_19020 PF00155 Aminotransferase class I and II K08M4_19030 PF00815 Histidinol dehydrogenase K08M4_19040 PF01634 ATP phosphoribosyltransferase K08M4_19040 PF08029 HisG, C-terminal domain K08M4_19050 PF03553 K08M4_19050 K08M4_19060 PF00816 H-NS histone family K08M4_19070 PF00294 pfkB family carbohydrate kinase K08M4_19090 PF03054 tRNA methyl transferase K08M4_19100 PF04356 Protein of unknown function (DUF489) K08M4_19110 PF00206 Lyase K08M4_19110 PF08328 Adenylosuccinate lyase C-terminal K08M4_19120 PF01435 Peptidase family M48 K08M4_19140 PF13500 AAA domain K08M4_19160 PF00155 Aminotransferase class I and II K08M4_19170 PF01406 tRNA synthetases class I (C) catalytic domain K08M4_19170 PF09190 DALR domain K08M4_19180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_19210 PF00563 EAL domain K08M4_19240 PF02810 SEC-C motif K08M4_19250 PF01502 Phosphoribosyl-AMP cyclohydrolase K08M4_19260 PF00977 Histidine biosynthesis protein K08M4_19270 PF00977 Histidine biosynthesis protein K08M4_19280 PF00977 Histidine biosynthesis protein K08M4_19290 PF00977 Histidine biosynthesis protein K08M4_19310 PF00475 Imidazoleglycerol-phosphate dehydratase K08M4_19310 PF13242 HAD-hyrolase-like K08M4_19340 PF00815 Histidinol dehydrogenase K08M4_19350 PF00815 Histidinol dehydrogenase K08M4_19360 PF01634 ATP phosphoribosyltransferase K08M4_19360 PF08029 HisG, C-terminal domain K08M4_19370 PF03553 K08M4_19370 K08M4_19380 PF00816 H-NS histone family K08M4_19390 PF00294 pfkB family carbohydrate kinase K08M4_19410 PF03054 tRNA methyl transferase K08M4_19420 PF04356 Protein of unknown function (DUF489) K08M4_19430 PF00206 Lyase K08M4_19430 PF08328 Adenylosuccinate lyase C-terminal K08M4_19440 PF01435 Peptidase family M48 K08M4_19460 PF13500 AAA domain K08M4_19470 PF08241 Methyltransferase domain K08M4_19480 PF00155 Aminotransferase class I and II K08M4_19490 PF04055 Radical SAM superfamily K08M4_19490 PF06968 Biotin and Thiamin Synthesis associated domain K08M4_19500 PF00202 Aminotransferase class-III K08M4_19510 PF00072 Response regulator receiver domain K08M4_19520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M4_19520 PF02403 Seryl-tRNA synthetase N-terminal domain K08M4_19530 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_19530 PF12002 MgsA AAA+ ATPase C terminal K08M4_19530 PF16193 K08M4_19530 K08M4_19540 PF03548 Outer membrane lipoprotein carrier protein LolA K08M4_19550 PF01580 FtsK/SpoIIIE family K08M4_19550 PF09397 Ftsk gamma domain K08M4_19550 PF13491 K08M4_19550 K08M4_19560 PF01037 AsnC family K08M4_19560 PF13412 Winged helix-turn-helix DNA-binding K08M4_19570 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K08M4_19570 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K08M4_19580 PF13679 K08M4_19580 K08M4_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_19590 PF03466 LysR substrate binding domain K08M4_19610 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K08M4_19620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K08M4_19630 PF13176 Tetratricopeptide repeat K08M4_19640 PF06305 K08M4_19640 K08M4_19650 PF00216 Bacterial DNA-binding protein K08M4_19660 PF00575 S1 RNA binding domain K08M4_19670 PF02224 Cytidylate kinase K08M4_19680 PF02348 Cytidylyltransferase K08M4_19690 PF03966 Trm112p-like protein K08M4_19700 PF02606 Tetraacyldisaccharide-1-P 4'-kinase K08M4_19710 PF00005 ABC transporter K08M4_19710 PF00664 ABC transporter transmembrane region K08M4_19720 PF00753 Metallo-beta-lactamase superfamily K08M4_19720 PF03772 K08M4_19720 K08M4_19730 PF09835 K08M4_19730 K08M4_19740 PF02687 K08M4_19740 K08M4_19740 PF12704 MacB-like periplasmic core domain K08M4_19750 PF00005 ABC transporter K08M4_19760 PF02687 K08M4_19760 K08M4_19760 PF12704 MacB-like periplasmic core domain K08M4_19780 PF00270 DEAD/DEAH box helicase K08M4_19780 PF00271 Helicase conserved C-terminal domain K08M4_19780 PF02559 CarD-like/TRCF domain K08M4_19780 PF03461 TRCF domain K08M4_19790 PF10972 K08M4_19790 K08M4_19800 PF13302 Acetyltransferase (GNAT) domain K08M4_19810 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_19820 PF05728 Uncharacterised protein family (UPF0227) K08M4_19830 PF01636 Phosphotransferase enzyme family K08M4_19840 PF13036 Protein of unknown function (DUF3897) K08M4_19850 PF07233 Protein of unknown function (DUF1425) K08M4_19870 PF01230 HIT domain K08M4_19880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_19890 PF09002 Domain of unknown function (DUF1887) K08M4_19900 PF01048 Phosphorylase superfamily K08M4_19910 PF00122 E1-E2 ATPase K08M4_19910 PF00403 Heavy-metal-associated domain K08M4_19910 PF00702 haloacid dehalogenase-like hydrolase K08M4_19920 PF01554 MatE K08M4_19930 PF00571 CBS domain K08M4_19950 PF02885 Glycosyl transferase family, helical bundle domain K08M4_19960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_19970 PF00892 EamA-like transporter family K08M4_19980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_19990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_20000 PF03466 LysR substrate binding domain K08M4_20020 PF13533 Biotin-lipoyl like K08M4_20030 PF00753 Metallo-beta-lactamase superfamily K08M4_20030 PF14863 Alkyl sulfatase dimerisation K08M4_20030 PF14864 Alkyl sulfatase C-terminal K08M4_20050 PF00873 AcrB/AcrD/AcrF family K08M4_20060 PF13533 Biotin-lipoyl like K08M4_20070 PF00440 Bacterial regulatory proteins, tetR family K08M4_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_20080 PF03466 LysR substrate binding domain K08M4_20090 PF08803 Putative mono-oxygenase ydhR K08M4_20110 PF08212 Lipocalin-like domain K08M4_20120 PF07969 Amidohydrolase family K08M4_20130 PF07690 Major Facilitator Superfamily K08M4_20140 PF00005 ABC transporter K08M4_20150 PF01497 Periplasmic binding protein K08M4_20160 PF01032 FecCD transport family K08M4_20170 PF00392 Bacterial regulatory proteins, gntR family K08M4_20170 PF07729 FCD domain K08M4_20180 PF00593 TonB dependent receptor K08M4_20180 PF07715 TonB-dependent Receptor Plug Domain K08M4_20190 PF00188 Cysteine-rich secretory protein family K08M4_20210 PF12695 Alpha/beta hydrolase family K08M4_20230 PF13673 Acetyltransferase (GNAT) domain K08M4_20250 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel K08M4_20260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_20270 PF01810 K08M4_20270 K08M4_20280 PF01037 AsnC family K08M4_20280 PF13404 AsnC-type helix-turn-helix domain K08M4_20300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_20310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_20310 PF03466 LysR substrate binding domain K08M4_20320 PF02056 Family 4 glycosyl hydrolase K08M4_20320 PF11975 Family 4 glycosyl hydrolase C-terminal domain K08M4_20330 PF04794 YdjC-like protein K08M4_20340 PF13411 MerR HTH family regulatory protein K08M4_20350 PF07273 Protein of unknown function (DUF1439) K08M4_20360 PF04134 K08M4_20360 K08M4_20380 PF03109 K08M4_20380 K08M4_20390 PF00255 Glutathione peroxidase K08M4_20400 PF11911 K08M4_20400 K08M4_20420 PF01943 K08M4_20420 K08M4_20430 PF00535 Glycosyl transferase family 2 K08M4_20440 PF00534 Glycosyl transferases group 1 K08M4_20450 PF00075 RNase H K08M4_20450 PF01693 Caulimovirus viroplasmin K08M4_20460 PF05437 K08M4_20460 K08M4_20470 PF03591 K08M4_20470 K08M4_20480 PF02311 AraC-like ligand binding domain K08M4_20480 PF12833 Helix-turn-helix domain K08M4_20510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M4_20520 PF09619 Type III secretion system lipoprotein chaperone (YscW) K08M4_20530 PF13622 Thioesterase-like superfamily K08M4_20550 PF01037 AsnC family K08M4_20550 PF13412 Winged helix-turn-helix DNA-binding K08M4_20560 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_20570 PF06844 Protein of unknown function (DUF1244) K08M4_20580 PF00873 AcrB/AcrD/AcrF family K08M4_20590 PF16576 K08M4_20590 K08M4_20670 PF04280 Tim44-like domain K08M4_20680 PF13305 WHG domain K08M4_20690 PF01553 Acyltransferase K08M4_20690 PF07690 Major Facilitator Superfamily K08M4_20700 PF03601 K08M4_20700 K08M4_20720 PF00501 AMP-binding enzyme K08M4_20730 PF13378 Enolase C-terminal domain-like K08M4_20740 PF00378 Enoyl-CoA hydratase/isomerase family K08M4_20750 PF12697 Alpha/beta hydrolase family K08M4_20760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M4_20760 PF16582 K08M4_20760 K08M4_20770 PF00425 chorismate binding enzyme K08M4_20780 PF00155 Aminotransferase class I and II K08M4_20790 PF13023 HD domain K08M4_20800 PF01966 HD domain K08M4_20800 PF13286 Phosphohydrolase-associated domain K08M4_20810 PF03942 K08M4_20810 K08M4_20820 PF01694 Rhomboid family K08M4_20830 PF12836 Helix-hairpin-helix motif K08M4_20840 PF13616 PPIC-type PPIASE domain K08M4_20840 PF13624 SurA N-terminal domain K08M4_20850 PF00216 Bacterial DNA-binding protein K08M4_20860 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_20860 PF02190 ATP-dependent protease La (LON) domain K08M4_20860 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M4_20870 PF06689 ClpX C4-type zinc finger K08M4_20870 PF07724 AAA domain (Cdc48 subfamily) K08M4_20870 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_20880 PF00574 Clp protease K08M4_20890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_20890 PF05697 Bacterial trigger factor protein (TF) K08M4_20890 PF05698 Bacterial trigger factor protein (TF) C-terminus K08M4_20900 PF00512 His Kinase A (phospho-acceptor) domain K08M4_20900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_20900 PF02743 Cache domain K08M4_20910 PF00072 Response regulator receiver domain K08M4_20910 PF00158 Sigma-54 interaction domain K08M4_20910 PF02954 Bacterial regulatory protein, Fis family K08M4_20930 PF06808 K08M4_20930 K08M4_20940 PF04290 K08M4_20940 K08M4_20950 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M4_20960 PF13279 Thioesterase-like superfamily K08M4_20970 PF01648 4'-phosphopantetheinyl transferase superfamily K08M4_20980 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_20980 PF00550 Phosphopantetheine attachment site K08M4_20980 PF00698 Acyl transferase domain K08M4_20980 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_20980 PF08659 KR domain K08M4_20980 PF14765 Polyketide synthase dehydratase K08M4_20980 PF16197 K08M4_20980 K08M4_21000 PF00109 Beta-ketoacyl synthase, N-terminal domain K08M4_21000 PF02801 Beta-ketoacyl synthase, C-terminal domain K08M4_21000 PF07977 FabA-like domain K08M4_21020 PF00570 HRDC domain K08M4_21020 PF01612 3'-5' exonuclease K08M4_21030 PF00501 AMP-binding enzyme K08M4_21030 PF13193 AMP-binding enzyme C-terminal domain K08M4_21040 PF00561 alpha/beta hydrolase fold K08M4_21050 PF03843 K08M4_21050 K08M4_21070 PF00814 Glycoprotease family K08M4_21080 PF04851 Type III restriction enzyme, res subunit K08M4_21080 PF13307 Helicase C-terminal domain K08M4_21100 PF00551 Formyl transferase K08M4_21100 PF01842 ACT domain K08M4_21110 PF06185 YecM protein K08M4_21120 PF00750 tRNA synthetases class I (R) K08M4_21120 PF03485 Arginyl tRNA synthetase N terminal domain K08M4_21120 PF05746 DALR anticodon binding domain K08M4_21130 PF01230 HIT domain K08M4_21140 PF09012 FeoC like transcriptional regulator K08M4_21150 PF02421 Ferrous iron transport protein B K08M4_21150 PF07664 K08M4_21150 K08M4_21150 PF07670 Nucleoside recognition K08M4_21160 PF04023 FeoA domain K08M4_21170 PF07494 Two component regulator propeller K08M4_21170 PF12833 Helix-turn-helix domain K08M4_21180 PF01297 Periplasmic solute binding protein family K08M4_21190 PF00005 ABC transporter K08M4_21200 PF00950 K08M4_21200 K08M4_21210 PF00549 CoA-ligase K08M4_21210 PF02629 CoA binding domain K08M4_21220 PF00549 CoA-ligase K08M4_21220 PF08442 ATP-grasp domain K08M4_21230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K08M4_21230 PF00364 Biotin-requiring enzyme K08M4_21230 PF02817 e3 binding domain K08M4_21240 PF00676 Dehydrogenase E1 component K08M4_21240 PF02779 Transketolase, pyrimidine binding domain K08M4_21240 PF16078 K08M4_21240 K08M4_21240 PF16870 K08M4_21240 K08M4_21250 PF13085 2Fe-2S iron-sulfur cluster binding domain K08M4_21250 PF13534 4Fe-4S dicluster domain K08M4_21260 PF00890 FAD binding domain K08M4_21260 PF02910 Fumarate reductase flavoprotein C-term K08M4_21270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K08M4_21280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K08M4_21290 PF00285 Citrate synthase K08M4_21300 PF01784 NIF3 (NGG1p interacting factor 3) K08M4_21310 PF08907 K08M4_21310 K08M4_21320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_21320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_21320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_21320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_21330 PF03925 SeqA protein K08M4_21330 PF17206 K08M4_21330 K08M4_21340 PF12697 Alpha/beta hydrolase family K08M4_21350 PF10981 K08M4_21350 K08M4_21360 PF00258 Flavodoxin K08M4_21370 PF14539 Domain of unknown function (DUF4442) K08M4_21380 PF01475 Ferric uptake regulator family K08M4_21390 PF00749 tRNA synthetases class I (E and Q), catalytic domain K08M4_21390 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain K08M4_21400 PF00367 phosphotransferase system, EIIB K08M4_21400 PF02378 Phosphotransferase system, EIIC K08M4_21410 PF01979 Amidohydrolase family K08M4_21420 PF00480 ROK family K08M4_21430 PF00999 Sodium/hydrogen exchanger family K08M4_21430 PF02254 TrkA-N domain K08M4_21440 PF00733 Asparagine synthase K08M4_21440 PF13537 Glutamine amidotransferase domain K08M4_21450 PF02357 Transcription termination factor nusG K08M4_21460 PF00854 POT family K08M4_21470 PF00762 Ferrochelatase K08M4_21480 PF00406 Adenylate kinase K08M4_21480 PF05191 Adenylate kinase, active site lid K08M4_21490 PF00183 Hsp90 protein K08M4_21490 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_21500 PF00486 Transcriptional regulatory protein, C terminal K08M4_21510 PF17323 K08M4_21510 K08M4_21520 PF10262 Rdx family K08M4_21530 PF12850 Calcineurin-like phosphoesterase superfamily domain K08M4_21540 PF00571 CBS domain K08M4_21560 PF07556 K08M4_21560 K08M4_21570 PF07556 K08M4_21570 K08M4_21580 PF01370 NAD dependent epimerase/dehydratase family K08M4_21580 PF08338 Domain of unknown function (DUF1731) K08M4_21590 PF00106 short chain dehydrogenase K08M4_21600 PF00085 Thioredoxin K08M4_21600 PF14559 Tetratricopeptide repeat K08M4_21600 PF14561 Tetratricopeptide repeat K08M4_21610 PF01145 SPFH domain / Band 7 family K08M4_21620 PF00149 Calcineurin-like phosphoesterase K08M4_21660 PF10088 K08M4_21660 K08M4_21680 PF13391 K08M4_21680 K08M4_21700 PF14279 K08M4_21700 K08M4_21730 PF01844 HNH endonuclease K08M4_21780 PF16200 K08M4_21780 K08M4_21790 PF01957 NfeD-like C-terminal, partner-binding K08M4_21800 PF00376 MerR family regulatory protein K08M4_21800 PF09278 MerR, DNA binding K08M4_21830 PF13609 Gram-negative porin K08M4_21840 PF00533 BRCA1 C Terminus (BRCT) domain K08M4_21850 PF00533 BRCA1 C Terminus (BRCT) domain K08M4_21850 PF01653 NAD-dependent DNA ligase adenylation domain K08M4_21850 PF03120 NAD-dependent DNA ligase OB-fold domain K08M4_21860 PF04354 ZipA, C-terminal FtsZ-binding domain K08M4_21870 PF07264 Etoposide-induced protein 2 K08M4_21880 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_21890 PF00381 PTS HPr component phosphorylation site K08M4_21900 PF00391 PEP-utilising enzyme, mobile domain K08M4_21900 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_21900 PF05524 PEP-utilising enzyme, N-terminal K08M4_21910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K08M4_21920 PF00669 Bacterial flagellin N-terminal helical region K08M4_21920 PF00700 Bacterial flagellin C-terminal helical region K08M4_21920 PF07196 Flagellin hook IN motif K08M4_21930 PF00669 Bacterial flagellin N-terminal helical region K08M4_21930 PF00700 Bacterial flagellin C-terminal helical region K08M4_21930 PF07196 Flagellin hook IN motif K08M4_21940 PF04261 Dyp-type peroxidase family K08M4_21950 PF11143 K08M4_21950 K08M4_21960 PF11169 K08M4_21960 K08M4_21970 PF13698 K08M4_21970 K08M4_21980 PF09904 Winged helix-turn helix K08M4_21990 PF00582 Universal stress protein family K08M4_22000 PF00924 Mechanosensitive ion channel K08M4_22010 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M4_22020 PF08443 RimK-like ATP-grasp domain K08M4_22030 PF09904 Winged helix-turn helix K08M4_22040 PF03960 ArsC family K08M4_22050 PF01546 Peptidase family M20/M25/M40 K08M4_22050 PF07687 Peptidase dimerisation domain K08M4_22060 PF02557 D-alanyl-D-alanine carboxypeptidase K08M4_22070 PF11446 K08M4_22070 K08M4_22080 PF06804 NlpB/DapX lipoprotein K08M4_22090 PF00701 Dihydrodipicolinate synthetase family K08M4_22100 PF13740 ACT domain K08M4_22110 PF00578 AhpC/TSA family K08M4_22120 PF01594 K08M4_22120 K08M4_22130 PF01206 Sulfurtransferase TusA K08M4_22140 PF01435 Peptidase family M48 K08M4_22140 PF14559 Tetratricopeptide repeat K08M4_22150 PF03960 ArsC family K08M4_22160 PF03358 NADPH-dependent FMN reductase K08M4_22170 PF09842 K08M4_22170 K08M4_22180 PF09839 K08M4_22180 K08M4_22190 PF00860 Permease family K08M4_22200 PF14681 Uracil phosphoribosyltransferase K08M4_22210 PF00586 AIR synthase related protein, N-terminal domain K08M4_22210 PF02769 AIR synthase related protein, C-terminal domain K08M4_22220 PF00551 Formyl transferase K08M4_22230 PF13230 Glutamine amidotransferases class-II K08M4_22240 PF13580 SIS domain K08M4_22250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K08M4_22250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K08M4_22250 PF09317 K08M4_22250 K08M4_22270 PF00929 Exonuclease K08M4_22280 PF00075 RNase H K08M4_22290 PF08241 Methyltransferase domain K08M4_22300 PF00753 Metallo-beta-lactamase superfamily K08M4_22300 PF16123 K08M4_22300 K08M4_22310 PF01464 Transglycosylase SLT domain K08M4_22310 PF01476 LysM domain K08M4_22320 PF06930 K08M4_22320 K08M4_22330 PF03372 Endonuclease/Exonuclease/phosphatase family K08M4_22340 PF00543 Nitrogen regulatory protein P-II K08M4_22350 PF00034 Cytochrome c K08M4_22360 PF01171 PP-loop family K08M4_22360 PF09179 TilS substrate binding domain K08M4_22360 PF11734 TilS substrate C-terminal domain K08M4_22370 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K08M4_22380 PF01336 OB-fold nucleic acid binding domain K08M4_22380 PF02811 PHP domain K08M4_22380 PF07733 Bacterial DNA polymerase III alpha subunit K08M4_22380 PF14579 Helix-hairpin-helix motif K08M4_22390 PF01351 Ribonuclease HII K08M4_22400 PF02684 K08M4_22400 K08M4_22410 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_22410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K08M4_22420 PF07977 FabA-like domain K08M4_22430 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_22430 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K08M4_22430 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_22440 PF03938 Outer membrane protein (OmpH-like) K08M4_22450 PF01103 Surface antigen K08M4_22450 PF07244 Surface antigen variable number repeat K08M4_22460 PF00595 PDZ domain (Also known as DHR or GLGF) K08M4_22460 PF02163 Peptidase family M50 K08M4_22470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase K08M4_22470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K08M4_22470 PF13288 DXP reductoisomerase C-terminal domain K08M4_22480 PF01148 Cytidylyltransferase family K08M4_22490 PF01255 Putative undecaprenyl diphosphate synthase K08M4_22500 PF01765 Ribosome recycling factor K08M4_22510 PF00696 Amino acid kinase family K08M4_22520 PF00889 Elongation factor TS K08M4_22530 PF00318 Ribosomal protein S2 K08M4_22540 PF00557 Metallopeptidase family M24 K08M4_22550 PF01842 ACT domain K08M4_22550 PF01909 Nucleotidyltransferase domain K08M4_22550 PF01966 HD domain K08M4_22550 PF08335 GlnD PII-uridylyltransferase K08M4_22560 PF11944 K08M4_22560 K08M4_22570 PF00849 RNA pseudouridylate synthase K08M4_22580 PF04287 tRNA pseudouridine synthase C K08M4_22590 PF12069 K08M4_22590 K08M4_22600 PF11743 K08M4_22600 K08M4_22610 PF13302 Acetyltransferase (GNAT) domain K08M4_22630 PF02639 K08M4_22630 K08M4_22640 PF03806 K08M4_22640 K08M4_22650 PF01197 Ribosomal protein L31 K08M4_22660 PF01980 Uncharacterised protein family UPF0066 K08M4_22670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K08M4_22670 PF03129 Anticodon binding domain K08M4_22670 PF04073 Aminoacyl-tRNA editing domain K08M4_22680 PF04391 K08M4_22680 K08M4_22690 PF06786 K08M4_22690 K08M4_22700 PF14056 K08M4_22700 K08M4_22720 PF13551 Winged helix-turn helix K08M4_22720 PF13592 K08M4_22720 K08M4_22730 PF13358 DDE superfamily endonuclease K08M4_22740 PF00464 Serine hydroxymethyltransferase K08M4_22750 PF02588 K08M4_22750 K08M4_22760 PF00128 Alpha amylase, catalytic domain K08M4_22760 PF16657 K08M4_22760 K08M4_22770 PF00367 phosphotransferase system, EIIB K08M4_22770 PF02378 Phosphotransferase system, EIIC K08M4_22780 PF00356 Bacterial regulatory proteins, lacI family K08M4_22780 PF13377 Periplasmic binding protein-like domain K08M4_22790 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme K08M4_22800 PF13242 HAD-hyrolase-like K08M4_22810 PF00005 ABC transporter K08M4_22810 PF09383 NIL domain K08M4_22820 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_22830 PF03180 NLPA lipoprotein K08M4_22840 PF10071 K08M4_22840 K08M4_22850 PF07348 Syd protein (SUKH-2) K08M4_22860 PF14489 QueF-like protein K08M4_22860 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term K08M4_22880 PF00990 GGDEF domain K08M4_22890 PF03641 Possible lysine decarboxylase K08M4_22890 PF11892 Domain of unknown function (DUF3412) K08M4_22890 PF14793 Domain of unknown function (DUF4478) K08M4_22900 PF01367 5'-3' exonuclease, C-terminal SAM fold K08M4_22900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K08M4_22910 PF00209 Sodium:neurotransmitter symporter family K08M4_22920 PF11101 K08M4_22920 K08M4_22930 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M4_22940 PF00270 DEAD/DEAH box helicase K08M4_22940 PF00271 Helicase conserved C-terminal domain K08M4_22940 PF16124 K08M4_22940 K08M4_22950 PF00817 impB/mucB/samB family K08M4_22950 PF11798 IMS family HHH motif K08M4_22950 PF11799 impB/mucB/samB family C-terminal domain K08M4_22960 PF00072 Response regulator receiver domain K08M4_22960 PF00990 GGDEF domain K08M4_22970 PF04400 K08M4_22970 K08M4_22980 PF02424 ApbE family K08M4_22990 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_22990 PF00175 Oxidoreductase NAD-binding domain K08M4_22990 PF00970 Oxidoreductase FAD-binding domain K08M4_23000 PF02508 K08M4_23000 K08M4_23010 PF02508 K08M4_23010 K08M4_23020 PF04205 FMN-binding domain K08M4_23030 PF03116 K08M4_23030 K08M4_23040 PF05896 K08M4_23040 K08M4_23040 PF11973 K08M4_23040 K08M4_23050 PF01722 BolA-like protein K08M4_23060 PF05175 Methyltransferase small domain K08M4_23060 PF08468 Methyltransferase small domain N-terminal K08M4_23070 PF03923 K08M4_23070 K08M4_23080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K08M4_23090 PF07690 Major Facilitator Superfamily K08M4_23100 PF03502 Nucleoside-specific channel-forming protein, Tsx K08M4_23110 PF02558 Ketopantoate reductase PanE/ApbA K08M4_23110 PF08546 Ketopantoate reductase PanE/ApbA C terminal K08M4_23120 PF00266 Aminotransferase class-V K08M4_23130 PF02657 Fe-S metabolism associated domain K08M4_23140 PF00899 ThiF family K08M4_23150 PF03562 MltA specific insert domain K08M4_23150 PF06725 3D domain K08M4_23160 PF11012 K08M4_23160 K08M4_23170 PF00583 Acetyltransferase (GNAT) family K08M4_23170 PF00696 Amino acid kinase family K08M4_23190 PF13538 UvrD-like helicase C-terminal domain K08M4_23190 PF13604 AAA domain K08M4_23200 PF00580 UvrD/REP helicase N-terminal domain K08M4_23200 PF12705 PD-(D/E)XK nuclease superfamily K08M4_23200 PF13361 UvrD-like helicase C-terminal domain K08M4_23220 PF04257 Exodeoxyribonuclease V, gamma subunit K08M4_23230 PF03595 Voltage-dependent anion channel K08M4_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_23240 PF03466 LysR substrate binding domain K08M4_23250 PF07130 YebG protein K08M4_23270 PF14057 K08M4_23270 K08M4_23280 PF01914 K08M4_23280 K08M4_23290 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_23290 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle K08M4_23300 PF02769 AIR synthase related protein, C-terminal domain K08M4_23300 PF13507 CobB/CobQ-like glutamine amidotransferase domain K08M4_23310 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_23310 PF01464 Transglycosylase SLT domain K08M4_23330 PF14437 K08M4_23330 K08M4_23340 PF00571 CBS domain K08M4_23340 PF01595 K08M4_23340 K08M4_23340 PF03471 Transporter associated domain K08M4_23360 PF03806 K08M4_23360 K08M4_23370 PF07963 Prokaryotic N-terminal methylation motif K08M4_23390 PF07963 Prokaryotic N-terminal methylation motif K08M4_23400 PF07963 Prokaryotic N-terminal methylation motif K08M4_23400 PF12019 Type II transport protein GspH K08M4_23410 PF07963 Prokaryotic N-terminal methylation motif K08M4_23410 PF16732 K08M4_23410 K08M4_23420 PF00226 DnaJ domain K08M4_23420 PF00684 DnaJ central domain K08M4_23420 PF01556 DnaJ C terminal domain K08M4_23430 PF00012 Hsp70 protein K08M4_23440 PF01609 Transposase DDE domain K08M4_23440 PF13006 K08M4_23440 K08M4_23450 PF08787 Alginate lyase K08M4_23460 PF00375 Sodium:dicarboxylate symporter family K08M4_23470 PF01025 GrpE K08M4_23480 PF01513 ATP-NAD kinase K08M4_23490 PF02463 RecF/RecN/SMC N terminal domain K08M4_23500 PF04355 SmpA / OmlA family K08M4_23510 PF03658 RnfH family Ubiquitin K08M4_23520 PF03364 Polyketide cyclase / dehydrase and lipid transport K08M4_23530 PF01668 SmpB protein K08M4_23550 PF05618 Putative ATP-dependant zinc protease K08M4_23560 PF13539 D-alanyl-D-alanine carboxypeptidase K08M4_23570 PF04250 K08M4_23570 K08M4_23580 PF04143 K08M4_23580 K08M4_23600 PF01553 Acyltransferase K08M4_23610 PF00753 Metallo-beta-lactamase superfamily K08M4_23610 PF07521 RNA-metabolising metallo-beta-lactamase K08M4_23610 PF10996 Beta-Casp domain K08M4_23620 PF01235 K08M4_23620 K08M4_23630 PF01184 K08M4_23630 K08M4_23640 PF00182 Chitinase class I K08M4_23640 PF02839 Carbohydrate binding domain K08M4_23650 PF00117 Glutamine amidotransferase class-I K08M4_23650 PF00958 GMP synthase C terminal domain K08M4_23650 PF02540 NAD synthase K08M4_23660 PF00478 IMP dehydrogenase / GMP reductase domain K08M4_23660 PF00571 CBS domain K08M4_23670 PF02601 K08M4_23670 K08M4_23670 PF13742 K08M4_23670 K08M4_23680 PF07191 zinc-ribbons K08M4_23690 PF00990 GGDEF domain K08M4_23690 PF13185 GAF domain K08M4_23710 PF01926 50S ribosome-binding GTPase K08M4_23710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K08M4_23720 PF13360 PQQ-like domain K08M4_23730 PF09976 Tetratricopeptide repeat K08M4_23740 PF03129 Anticodon binding domain K08M4_23740 PF13393 Histidyl-tRNA synthetase K08M4_23750 PF04551 GcpE protein K08M4_23760 PF13413 Helix-turn-helix domain K08M4_23760 PF13464 K08M4_23760 K08M4_23770 PF04055 Radical SAM superfamily K08M4_23780 PF00334 Nucleoside diphosphate kinase K08M4_23790 PF00883 Cytosol aminopeptidase family, catalytic domain K08M4_23790 PF12404 K08M4_23790 K08M4_23800 PF04384 Iron-sulphur cluster assembly K08M4_23810 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_23820 PF00012 Hsp70 protein K08M4_23830 PF00226 DnaJ domain K08M4_23830 PF07743 HSCB C-terminal oligomerisation domain K08M4_23840 PF01521 Iron-sulphur cluster biosynthesis K08M4_23850 PF01592 NifU-like N terminal domain K08M4_23860 PF00266 Aminotransferase class-V K08M4_23870 PF02082 Transcriptional regulator K08M4_23880 PF00588 SpoU rRNA Methylase family K08M4_23890 PF00459 Inositol monophosphatase family K08M4_23900 PF02355 Protein export membrane protein K08M4_23900 PF07549 SecD/SecF GG Motif K08M4_23910 PF02355 Protein export membrane protein K08M4_23910 PF07549 SecD/SecF GG Motif K08M4_23910 PF13721 SecD export protein N-terminal TM region K08M4_23920 PF02699 Preprotein translocase subunit K08M4_23930 PF01702 Queuine tRNA-ribosyltransferase K08M4_23940 PF02547 Queuosine biosynthesis protein K08M4_23950 PF00571 CBS domain K08M4_23960 PF00356 Bacterial regulatory proteins, lacI family K08M4_23960 PF13377 Periplasmic binding protein-like domain K08M4_23970 PF00251 Glycosyl hydrolases family 32 N-terminal domain K08M4_23970 PF08244 Glycosyl hydrolases family 32 C terminal K08M4_23980 PF00367 phosphotransferase system, EIIB K08M4_23980 PF02378 Phosphotransferase system, EIIC K08M4_23990 PF00294 pfkB family carbohydrate kinase K08M4_24000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_24000 PF12729 K08M4_24000 K08M4_24010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_24010 PF03466 LysR substrate binding domain K08M4_24020 PF00578 AhpC/TSA family K08M4_24020 PF10417 C-terminal domain of 1-Cys peroxiredoxin K08M4_24030 PF03932 CutC family K08M4_24060 PF01895 PhoU domain K08M4_24070 PF00005 ABC transporter K08M4_24080 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_24090 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_24100 PF02503 Polyphosphate kinase middle domain K08M4_24100 PF13089 Polyphosphate kinase N-terminal domain K08M4_24100 PF13090 Polyphosphate kinase C-terminal domain K08M4_24110 PF02541 Ppx/GppA phosphatase family K08M4_24120 PF12849 PBP superfamily domain K08M4_24130 PF00512 His Kinase A (phospho-acceptor) domain K08M4_24130 PF00989 PAS fold K08M4_24130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_24130 PF11808 K08M4_24130 K08M4_24140 PF00072 Response regulator receiver domain K08M4_24140 PF00486 Transcriptional regulatory protein, C terminal K08M4_24150 PF04381 Putative exonuclease, RdgC K08M4_24160 PF01136 K08M4_24160 K08M4_24160 PF16325 K08M4_24160 K08M4_24170 PF12838 4Fe-4S dicluster domain K08M4_24190 PF03411 Penicillin-insensitive murein endopeptidase K08M4_24200 PF13358 DDE superfamily endonuclease K08M4_24210 PF13551 Winged helix-turn helix K08M4_24210 PF13592 K08M4_24210 K08M4_24270 PF00004 ATPase family associated with various cellular activities (AAA) K08M4_24270 PF02861 Clp amino terminal domain K08M4_24270 PF07724 AAA domain (Cdc48 subfamily) K08M4_24270 PF10431 C-terminal, D2-small domain, of ClpB protein K08M4_24280 PF02578 Multi-copper polyphenol oxidoreductase laccase K08M4_24290 PF00849 RNA pseudouridylate synthase K08M4_24290 PF01479 S4 domain K08M4_24300 PF13525 Outer membrane lipoprotein K08M4_24310 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_24310 PF01464 Transglycosylase SLT domain K08M4_24320 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M4_24330 PF00800 Prephenate dehydratase K08M4_24330 PF01817 Chorismate mutase type II K08M4_24350 PF00563 EAL domain K08M4_24350 PF00990 GGDEF domain K08M4_24360 PF01931 Protein of unknown function DUF84 K08M4_24370 PF01371 Trp repressor protein K08M4_24380 PF01464 Transglycosylase SLT domain K08M4_24380 PF14718 Soluble lytic murein transglycosylase L domain K08M4_24390 PF00005 ABC transporter K08M4_24390 PF12848 ABC transporter K08M4_24400 PF07238 PilZ domain K08M4_24410 PF01551 Peptidase family M23 K08M4_24420 PF01817 Chorismate mutase type II K08M4_24420 PF02153 Prephenate dehydrogenase K08M4_24430 PF00793 DAHP synthetase I family K08M4_24440 PF00933 Glycosyl hydrolase family 3 N terminal domain K08M4_24450 PF03702 Uncharacterised protein family (UPF0075) K08M4_24460 PF13580 SIS domain K08M4_24470 PF10973 K08M4_24470 K08M4_24480 PF02554 K08M4_24480 K08M4_24480 PF13722 K08M4_24480 K08M4_24490 PF06580 K08M4_24490 K08M4_24490 PF07694 5TMR of 5TMR-LYT K08M4_24490 PF15714 K08M4_24490 K08M4_24500 PF00072 Response regulator receiver domain K08M4_24500 PF04397 LytTr DNA-binding domain K08M4_24510 PF02401 LytB protein K08M4_24520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_24530 PF01252 K08M4_24530 K08M4_24540 PF00133 tRNA synthetases class I (I, L, M and V) K08M4_24540 PF06827 Zinc finger found in FPG and IleRS K08M4_24540 PF08264 Anticodon-binding domain of tRNA K08M4_24550 PF01687 Riboflavin kinase K08M4_24550 PF06574 FAD synthetase K08M4_24560 PF03023 K08M4_24560 K08M4_24570 PF01649 Ribosomal protein S20 K08M4_24580 PF01022 Bacterial regulatory protein, arsR family K08M4_24590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_24590 PF03466 LysR substrate binding domain K08M4_24600 PF02690 K08M4_24600 K08M4_24610 PF00303 Thymidylate synthase K08M4_24620 PF01790 K08M4_24620 K08M4_24630 PF01925 K08M4_24630 K08M4_24640 PF00391 PEP-utilising enzyme, mobile domain K08M4_24640 PF01590 GAF domain K08M4_24640 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_24640 PF05524 PEP-utilising enzyme, N-terminal K08M4_24650 PF00293 NUDIX domain K08M4_24660 PF02976 DNA mismatch repair enzyme MutH K08M4_24690 PF00158 Sigma-54 interaction domain K08M4_24690 PF02954 Bacterial regulatory protein, Fis family K08M4_24700 PF00152 tRNA synthetases class II (D, K and N) K08M4_24700 PF01336 OB-fold nucleic acid binding domain K08M4_24710 PF00472 RF-1 domain K08M4_24710 PF03462 PCRF domain K08M4_24720 PF01368 DHH family K08M4_24720 PF02272 DHHA1 domain K08M4_24730 PF10411 Disulfide bond isomerase protein N-terminus K08M4_24730 PF13098 Thioredoxin-like domain K08M4_24740 PF00589 Phage integrase family K08M4_24740 PF02899 Phage integrase, N-terminal SAM-like domain K08M4_24750 PF00258 Flavodoxin K08M4_24760 PF05525 K08M4_24760 K08M4_24770 PF05175 Methyltransferase small domain K08M4_24780 PF00270 DEAD/DEAH box helicase K08M4_24780 PF00271 Helicase conserved C-terminal domain K08M4_24790 PF03883 K08M4_24790 K08M4_24800 PF01235 K08M4_24800 K08M4_24810 PF12065 K08M4_24810 K08M4_24820 PF01814 Hemerythrin HHE cation binding domain K08M4_24830 PF03167 Uracil DNA glycosylase superfamily K08M4_24840 PF01261 Xylose isomerase-like TIM barrel K08M4_24850 PF01228 Glycine radical K08M4_24860 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_24860 PF14821 Threonine synthase N terminus K08M4_24870 PF00288 GHMP kinases N terminal domain K08M4_24870 PF08544 GHMP kinases C terminal K08M4_24880 PF00696 Amino acid kinase family K08M4_24880 PF00742 Homoserine dehydrogenase K08M4_24880 PF01842 ACT domain K08M4_24880 PF03447 Homoserine dehydrogenase, NAD binding domain K08M4_24880 PF13840 ACT domain K08M4_24910 PF03737 Demethylmenaquinone methyltransferase K08M4_24920 PF00072 Response regulator receiver domain K08M4_24920 PF00486 Transcriptional regulatory protein, C terminal K08M4_24940 PF00072 Response regulator receiver domain K08M4_24940 PF00512 His Kinase A (phospho-acceptor) domain K08M4_24940 PF01627 Hpt domain K08M4_24940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_24940 PF08448 PAS fold K08M4_24950 PF00990 GGDEF domain K08M4_24950 PF08448 PAS fold K08M4_24950 PF13188 PAS domain K08M4_24960 PF04055 Radical SAM superfamily K08M4_24960 PF16199 K08M4_24960 K08M4_24970 PF00310 Glutamine amidotransferases class-II K08M4_24970 PF01493 GXGXG motif K08M4_24970 PF01645 Conserved region in glutamate synthase K08M4_24970 PF04898 Glutamate synthase central domain K08M4_24980 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_24980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K08M4_24990 PF00310 Glutamine amidotransferases class-II K08M4_24990 PF01493 GXGXG motif K08M4_24990 PF01645 Conserved region in glutamate synthase K08M4_24990 PF04898 Glutamate synthase central domain K08M4_25000 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_25000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K08M4_25010 PF07386 K08M4_25010 K08M4_25020 PF01048 Phosphorylase superfamily K08M4_25030 PF03186 K08M4_25030 K08M4_25040 PF01497 Periplasmic binding protein K08M4_25050 PF03458 K08M4_25050 K08M4_25060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_25060 PF03466 LysR substrate binding domain K08M4_25070 PF01925 K08M4_25070 K08M4_25080 PF02142 MGS-like domain K08M4_25080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K08M4_25080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K08M4_25090 PF00117 Glutamine amidotransferase class-I K08M4_25090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K08M4_25100 PF01113 Dihydrodipicolinate reductase, N-terminus K08M4_25100 PF05173 Dihydrodipicolinate reductase, C-terminus K08M4_25110 PF00293 NUDIX domain K08M4_25120 PF01043 SecA preprotein cross-linking domain K08M4_25120 PF02810 SEC-C motif K08M4_25120 PF07516 SecA Wing and Scaffold domain K08M4_25120 PF07517 SecA DEAD-like domain K08M4_25130 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase K08M4_25140 PF00091 Tubulin/FtsZ family, GTPase domain K08M4_25140 PF12327 FtsZ family, C-terminal domain K08M4_25150 PF02491 SHS2 domain inserted in FTSA K08M4_25150 PF14450 Cell division protein FtsA K08M4_25160 PF03799 Cell division protein FtsQ K08M4_25160 PF08478 POTRA domain, FtsQ-type K08M4_25170 PF01225 Mur ligase family, catalytic domain K08M4_25170 PF02875 Mur ligase family, glutamate ligase domain K08M4_25170 PF08245 Mur ligase middle domain K08M4_25180 PF03033 Glycosyltransferase family 28 N-terminal domain K08M4_25180 PF04101 Glycosyltransferase family 28 C-terminal domain K08M4_25190 PF01098 K08M4_25190 K08M4_25200 PF02875 Mur ligase family, glutamate ligase domain K08M4_25200 PF08245 Mur ligase middle domain K08M4_25210 PF00953 Glycosyl transferase family 4 K08M4_25210 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K08M4_25220 PF01225 Mur ligase family, catalytic domain K08M4_25220 PF02875 Mur ligase family, glutamate ligase domain K08M4_25220 PF08245 Mur ligase middle domain K08M4_25230 PF01225 Mur ligase family, catalytic domain K08M4_25230 PF02875 Mur ligase family, glutamate ligase domain K08M4_25230 PF08245 Mur ligase middle domain K08M4_25240 PF00905 Penicillin binding protein transpeptidase domain K08M4_25240 PF03717 Penicillin-binding Protein dimerisation domain K08M4_25250 PF04999 K08M4_25250 K08M4_25260 PF01795 MraW methylase family K08M4_25270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_25280 PF04348 LppC putative lipoprotein K08M4_25290 PF02021 Uncharacterised protein family UPF0102 K08M4_25300 PF13580 SIS domain K08M4_25310 PF04972 BON domain K08M4_25320 PF04386 Stringent starvation protein B K08M4_25330 PF00043 Glutathione S-transferase, C-terminal domain K08M4_25330 PF13417 Glutathione S-transferase, N-terminal domain K08M4_25340 PF02167 Cytochrome C1 family K08M4_25350 PF00032 Cytochrome b(C-terminal)/b6/petD K08M4_25350 PF00033 Cytochrome b(N-terminal)/b6/petB K08M4_25360 PF00355 Rieske [2Fe-2S] domain K08M4_25360 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K08M4_25370 PF00380 Ribosomal protein S9/S16 K08M4_25380 PF00572 Ribosomal protein L13 K08M4_25390 PF03969 AFG1-like ATPase K08M4_25400 PF06295 K08M4_25400 K08M4_25410 PF00595 PDZ domain (Also known as DHR or GLGF) K08M4_25410 PF13180 PDZ domain K08M4_25410 PF13365 Trypsin-like peptidase domain K08M4_25420 PF13180 PDZ domain K08M4_25420 PF13365 Trypsin-like peptidase domain K08M4_25430 PF00521 DNA gyrase/topoisomerase IV, subunit A K08M4_25430 PF03989 DNA gyrase C-terminal domain, beta-propeller K08M4_25440 PF00204 DNA gyrase B K08M4_25440 PF00986 DNA gyrase B subunit, carboxyl terminus K08M4_25440 PF01751 Toprim domain K08M4_25440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_25450 PF05728 Uncharacterised protein family (UPF0227) K08M4_25460 PF00149 Calcineurin-like phosphoesterase K08M4_25470 PF06853 K08M4_25470 K08M4_25480 PF00293 NUDIX domain K08M4_25490 PF02321 Outer membrane efflux protein K08M4_25500 PF00294 pfkB family carbohydrate kinase K08M4_25500 PF01467 Cytidylyltransferase K08M4_25510 PF03710 Glutamate-ammonia ligase adenylyltransferase K08M4_25510 PF08335 GlnD PII-uridylyltransferase K08M4_25520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_25530 PF00520 Ion transport protein K08M4_25540 PF01928 CYTH domain K08M4_25540 PF05235 CHAD domain K08M4_25550 PF01865 Protein of unknown function DUF47 K08M4_25560 PF01384 K08M4_25560 K08M4_25570 PF08239 Bacterial SH3 domain K08M4_25580 PF16537 K08M4_25580 K08M4_25590 PF01471 Putative peptidoglycan binding domain K08M4_25590 PF13401 AAA domain K08M4_25600 PF01743 Poly A polymerase head domain K08M4_25600 PF01966 HD domain K08M4_25600 PF12627 Probable RNA and SrmB- binding site of polymerase A K08M4_25610 PF02673 K08M4_25610 K08M4_25620 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K08M4_25630 PF02152 Dihydroneopterin aldolase K08M4_25640 PF02660 K08M4_25640 K08M4_25650 PF12697 Alpha/beta hydrolase family K08M4_25660 PF00814 Glycoprotease family K08M4_25670 PF01165 Ribosomal protein S21 K08M4_25680 PF09424 Yqey-like protein K08M4_25690 PF01807 CHC2 zinc finger K08M4_25690 PF08275 DNA primase catalytic core, N-terminal domain K08M4_25690 PF08278 DNA primase DnaG DnaB-binding K08M4_25690 PF10410 DnaB-helicase binding domain of primase K08M4_25690 PF13155 Toprim-like K08M4_25700 PF00140 Sigma-70 factor, region 1 K08M4_25700 PF03979 Sigma-70 factor, region 1 K08M4_25700 PF04539 Sigma-70 region 3 K08M4_25700 PF04542 Sigma-70 region 2 K08M4_25700 PF04545 Sigma-70, region 4 K08M4_25700 PF04546 Sigma-70, non-essential region K08M4_25720 PF01053 Cys/Met metabolism PLP-dependent enzyme K08M4_25730 PF01380 SIS domain K08M4_25730 PF13522 Glutamine amidotransferase domain K08M4_25740 PF00455 K08M4_25740 K08M4_25740 PF08220 DeoR-like helix-turn-helix domain K08M4_25750 PF00224 Pyruvate kinase, barrel domain K08M4_25750 PF02887 Pyruvate kinase, alpha/beta domain K08M4_25760 PF00392 Bacterial regulatory proteins, gntR family K08M4_25760 PF07729 FCD domain K08M4_25770 PF10369 Small subunit of acetolactate synthase K08M4_25770 PF13710 ACT domain K08M4_25780 PF00205 Thiamine pyrophosphate enzyme, central domain K08M4_25780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M4_25780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M4_25790 PF00501 AMP-binding enzyme K08M4_25800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_25800 PF03466 LysR substrate binding domain K08M4_25810 PF13528 Glycosyl transferase family 1 K08M4_25820 PF01569 PAP2 superfamily K08M4_25830 PF00873 AcrB/AcrD/AcrF family K08M4_25850 PF00440 Bacterial regulatory proteins, tetR family K08M4_25860 PF00682 HMGL-like K08M4_25860 PF08502 LeuA allosteric (dimerisation) domain K08M4_25870 PF00180 Isocitrate/isopropylmalate dehydrogenase K08M4_25880 PF00330 Aconitase family (aconitate hydratase) K08M4_25890 PF00694 Aconitase C-terminal domain K08M4_25900 PF04784 K08M4_25900 K08M4_25910 PF06041 Bacterial protein of unknown function (DUF924) K08M4_25920 PF00226 DnaJ domain K08M4_25920 PF05099 Tellurite resistance protein TerB K08M4_25930 PF03968 OstA-like protein K08M4_25930 PF04453 Organic solvent tolerance protein K08M4_25940 PF09312 SurA N-terminal domain K08M4_25940 PF13616 PPIC-type PPIASE domain K08M4_25950 PF04166 Pyridoxal phosphate biosynthetic protein PdxA K08M4_25960 PF00398 Ribosomal RNA adenine dimethylase K08M4_25970 PF04379 Protein of unknown function (DUF525) K08M4_25980 PF00149 Calcineurin-like phosphoesterase K08M4_25990 PF00186 Dihydrofolate reductase K08M4_26000 PF12821 K08M4_26000 K08M4_26010 PF06738 K08M4_26010 K08M4_26020 PF01018 GTP1/OBG K08M4_26020 PF01926 50S ribosome-binding GTPase K08M4_26030 PF01016 Ribosomal L27 protein K08M4_26040 PF00829 Ribosomal prokaryotic L21 protein K08M4_26050 PF00348 Polyprenyl synthetase K08M4_26070 PF00056 lactate/malate dehydrogenase, NAD binding domain K08M4_26070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K08M4_26080 PF01316 Arginine repressor, DNA binding domain K08M4_26080 PF02863 Arginine repressor, C-terminal domain K08M4_26090 PF16868 K08M4_26090 K08M4_26100 PF06808 K08M4_26100 K08M4_26100 PF11874 K08M4_26100 K08M4_26110 PF00582 Universal stress protein family K08M4_26120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_26120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_26130 PF00849 RNA pseudouridylate synthase K08M4_26150 PF00176 SNF2 family N-terminal domain K08M4_26150 PF00271 Helicase conserved C-terminal domain K08M4_26150 PF12137 RNA polymerase recycling family C-terminal K08M4_26160 PF02562 PhoH-like protein K08M4_26160 PF13638 PIN domain K08M4_26170 PF01523 Putative modulator of DNA gyrase K08M4_26180 PF00795 Carbon-nitrogen hydrolase K08M4_26190 PF13116 K08M4_26190 K08M4_26190 PF13502 K08M4_26190 K08M4_26200 PF00575 S1 RNA binding domain K08M4_26200 PF10150 Ribonuclease E/G family K08M4_26210 PF02545 Maf-like protein K08M4_26220 PF04093 K08M4_26220 K08M4_26230 PF04085 rod shape-determining protein MreC K08M4_26240 PF06723 MreB/Mbl protein K08M4_26270 PF07963 Prokaryotic N-terminal methylation motif K08M4_26280 PF07963 Prokaryotic N-terminal methylation motif K08M4_26290 PF07963 Prokaryotic N-terminal methylation motif K08M4_26300 PF07963 Prokaryotic N-terminal methylation motif K08M4_26310 PF07963 Prokaryotic N-terminal methylation motif K08M4_26330 PF00482 Type II secretion system (T2SS), protein F K08M4_26340 PF00437 Type II/IV secretion system protein K08M4_26340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K08M4_26360 PF13401 AAA domain K08M4_26370 PF00263 K08M4_26370 K08M4_26370 PF07655 K08M4_26370 K08M4_26390 PF04350 Pilus assembly protein, PilO K08M4_26410 PF00563 EAL domain K08M4_26410 PF00990 GGDEF domain K08M4_26410 PF17157 K08M4_26410 K08M4_26420 PF00436 Single-strand binding protein family K08M4_26430 PF00196 Bacterial regulatory proteins, luxR family K08M4_26440 PF00483 Nucleotidyl transferase K08M4_26450 PF00005 ABC transporter K08M4_26460 PF04932 K08M4_26460 K08M4_26460 PF11846 K08M4_26460 K08M4_26460 PF15864 K08M4_26460 K08M4_26470 PF00266 Aminotransferase class-V K08M4_26480 PF00696 Amino acid kinase family K08M4_26490 PF00809 Pterin binding enzyme K08M4_26490 PF02310 B12 binding domain K08M4_26490 PF02574 Homocysteine S-methyltransferase K08M4_26490 PF02607 B12 binding domain K08M4_26490 PF02965 Vitamin B12 dependent methionine synthase, activation domain K08M4_26500 PF00999 Sodium/hydrogen exchanger family K08M4_26530 PF01695 IstB-like ATP binding protein K08M4_26530 PF08483 K08M4_26530 K08M4_26540 PF13358 DDE superfamily endonuclease K08M4_26730 PF01507 Phosphoadenosine phosphosulfate reductase family K08M4_26740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_26740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_26750 PF00175 Oxidoreductase NAD-binding domain K08M4_26750 PF00258 Flavodoxin K08M4_26750 PF00667 FAD binding domain K08M4_26780 PF09583 K08M4_26780 K08M4_26790 PF01207 Dihydrouridine synthase (Dus) K08M4_26800 PF08681 Protein of unknown function (DUF1778) K08M4_26810 PF00583 Acetyltransferase (GNAT) family K08M4_26830 PF13690 Chemotaxis phosphatase CheX K08M4_26840 PF01609 Transposase DDE domain K08M4_26840 PF13006 K08M4_26840 K08M4_26850 PF00342 Phosphoglucose isomerase K08M4_26860 PF01894 Uncharacterised protein family UPF0047 K08M4_26870 PF01103 Surface antigen K08M4_26880 PF00842 Alanine racemase, C-terminal domain K08M4_26880 PF01168 Alanine racemase, N-terminal domain K08M4_26890 PF00772 DnaB-like helicase N terminal domain K08M4_26890 PF03796 DnaB-like helicase C terminal domain K08M4_26900 PF04338 Protein of unknown function, DUF481 K08M4_26910 PF01281 Ribosomal protein L9, N-terminal domain K08M4_26910 PF03948 Ribosomal protein L9, C-terminal domain K08M4_26920 PF01084 Ribosomal protein S18 K08M4_26930 PF01250 Ribosomal protein S6 K08M4_26940 PF00588 SpoU rRNA Methylase family K08M4_26940 PF08032 RNA 2'-O ribose methyltransferase substrate binding K08M4_26950 PF00575 S1 RNA binding domain K08M4_26950 PF00773 RNB domain K08M4_26950 PF08206 Ribonuclease B OB domain K08M4_26950 PF08461 Ribonuclease R winged-helix domain K08M4_26960 PF01979 Amidohydrolase family K08M4_26970 PF08238 Sel1 repeat K08M4_26980 PF00709 Adenylosuccinate synthetase K08M4_26990 PF09838 K08M4_26990 K08M4_27000 PF01145 SPFH domain / Band 7 family K08M4_27010 PF01145 SPFH domain / Band 7 family K08M4_27010 PF12221 K08M4_27010 K08M4_27020 PF01926 50S ribosome-binding GTPase K08M4_27020 PF13167 K08M4_27020 K08M4_27020 PF16360 K08M4_27020 K08M4_27030 PF17209 K08M4_27030 K08M4_27040 PF01715 IPP transferase K08M4_27050 PF01119 DNA mismatch repair protein, C-terminal domain K08M4_27050 PF08676 MutL C terminal dimerisation domain K08M4_27050 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_27060 PF01476 LysM domain K08M4_27060 PF01520 N-acetylmuramoyl-L-alanine amidase K08M4_27060 PF11741 AMIN domain K08M4_27070 PF02367 Uncharacterised P-loop hydrolase UPF0079 K08M4_27080 PF08331 K08M4_27080 K08M4_27080 PF13484 K08M4_27080 K08M4_27240 PF00929 Exonuclease K08M4_27250 PF03193 Protein of unknown function, DUF258 K08M4_27260 PF02666 K08M4_27260 K08M4_27270 PF00939 Sodium:sulfate symporter transmembrane region K08M4_27280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_27280 PF00672 HAMP domain K08M4_27280 PF02743 Cache domain K08M4_27290 PF00892 EamA-like transporter family K08M4_27300 PF00152 tRNA synthetases class II (D, K and N) K08M4_27310 PF00890 FAD binding domain K08M4_27310 PF02910 Fumarate reductase flavoprotein C-term K08M4_27320 PF13085 2Fe-2S iron-sulfur cluster binding domain K08M4_27320 PF13183 4Fe-4S dicluster domain K08M4_27330 PF02300 Fumarate reductase subunit C K08M4_27340 PF02313 Fumarate reductase subunit D K08M4_27360 PF01132 Elongation factor P (EF-P) OB domain K08M4_27360 PF08207 Elongation factor P (EF-P) KOW-like domain K08M4_27360 PF09285 Elongation factor P, C-terminal K08M4_27370 PF04055 Radical SAM superfamily K08M4_27370 PF13353 4Fe-4S single cluster domain K08M4_27380 PF02308 K08M4_27380 K08M4_27390 PF00990 GGDEF domain K08M4_27410 PF00118 TCP-1/cpn60 chaperonin family K08M4_27420 PF00166 Chaperonin 10 Kd subunit K08M4_27430 PF13807 K08M4_27430 K08M4_27440 PF01554 MatE K08M4_27450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M4_27450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K08M4_27460 PF01676 Metalloenzyme superfamily K08M4_27460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K08M4_27470 PF02397 K08M4_27470 K08M4_27480 PF01370 NAD dependent epimerase/dehydratase family K08M4_27490 PF02719 Polysaccharide biosynthesis protein K08M4_27490 PF13727 CoA-binding domain K08M4_27500 PF13683 K08M4_27500 K08M4_27520 PF13737 K08M4_27520 K08M4_27570 PF00535 Glycosyl transferase family 2 K08M4_27580 PF04138 K08M4_27580 K08M4_27590 PF00483 Nucleotidyl transferase K08M4_27590 PF12804 MobA-like NTP transferase domain K08M4_27600 PF00596 Class II Aldolase and Adducin N-terminal domain K08M4_27610 PF13419 Haloacid dehalogenase-like hydrolase K08M4_27620 PF00485 Phosphoribulokinase / Uridine kinase family K08M4_27630 PF01061 K08M4_27630 K08M4_27640 PF00005 ABC transporter K08M4_27640 PF14524 Wzt C-terminal domain K08M4_27650 PF08241 Methyltransferase domain K08M4_27660 PF13419 Haloacid dehalogenase-like hydrolase K08M4_27670 PF00534 Glycosyl transferases group 1 K08M4_27680 PF00534 Glycosyl transferases group 1 K08M4_27700 PF00534 Glycosyl transferases group 1 K08M4_27700 PF13477 Glycosyl transferase 4-like K08M4_27710 PF00581 Rhodanese-like domain K08M4_27720 PF02556 Preprotein translocase subunit SecB K08M4_27730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K08M4_27730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K08M4_27740 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_27740 PF06426 Serine acetyltransferase, N-terminal K08M4_27750 PF01551 Peptidase family M23 K08M4_27760 PF00440 Bacterial regulatory proteins, tetR family K08M4_27760 PF13972 Bacterial transcriptional repressor K08M4_27770 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase K08M4_27780 PF04321 RmlD substrate binding domain K08M4_27790 PF00483 Nucleotidyl transferase K08M4_27800 PF16363 K08M4_27800 K08M4_27810 PF01370 NAD dependent epimerase/dehydratase family K08M4_27820 PF03279 K08M4_27820 K08M4_27830 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_27850 PF00534 Glycosyl transferases group 1 K08M4_27860 PF01467 Cytidylyltransferase K08M4_27870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M4_27880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M4_27890 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family K08M4_27910 PF01755 K08M4_27910 K08M4_27920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K08M4_27930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K08M4_27940 PF05686 K08M4_27940 K08M4_27950 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K08M4_27950 PF06827 Zinc finger found in FPG and IleRS K08M4_27950 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K08M4_27970 PF00471 Ribosomal protein L33 K08M4_27980 PF00830 Ribosomal L28 family K08M4_27990 PF04002 RadC-like JAB domain K08M4_28000 PF02441 Flavoprotein K08M4_28000 PF04127 DNA / pantothenate metabolism flavoprotein K08M4_28010 PF00440 Bacterial regulatory proteins, tetR family K08M4_28020 PF03279 K08M4_28020 K08M4_28030 PF00156 Phosphoribosyl transferase domain K08M4_28040 PF01138 3' exoribonuclease family, domain 1 K08M4_28040 PF03725 3' exoribonuclease family, domain 2 K08M4_28050 PF03755 K08M4_28050 K08M4_28050 PF08340 K08M4_28050 K08M4_28060 PF00313 'Cold-shock' DNA-binding domain K08M4_28070 PF00455 K08M4_28070 K08M4_28070 PF08220 DeoR-like helix-turn-helix domain K08M4_28080 PF08282 haloacid dehalogenase-like hydrolase K08M4_28090 PF00834 Ribulose-phosphate 3 epimerase family K08M4_28100 PF00465 Iron-containing alcohol dehydrogenase K08M4_28110 PF13419 Haloacid dehalogenase-like hydrolase K08M4_28120 PF00923 Transaldolase K08M4_28130 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_28130 PF02779 Transketolase, pyrimidine binding domain K08M4_28130 PF02780 Transketolase, C-terminal domain K08M4_28140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K08M4_28150 PF01546 Peptidase family M20/M25/M40 K08M4_28160 PF00367 phosphotransferase system, EIIB K08M4_28160 PF02378 Phosphotransferase system, EIIC K08M4_28180 PF06146 K08M4_28180 K08M4_28190 PF00860 Permease family K08M4_28200 PF00625 Guanylate kinase K08M4_28210 PF01192 RNA polymerase Rpb6 K08M4_28220 PF02824 TGS domain K08M4_28220 PF04607 Region found in RelA / SpoT proteins K08M4_28220 PF13291 ACT domain K08M4_28220 PF13328 HD domain K08M4_28230 PF00270 DEAD/DEAH box helicase K08M4_28230 PF00271 Helicase conserved C-terminal domain K08M4_28230 PF17191 K08M4_28230 K08M4_28240 PF00512 His Kinase A (phospho-acceptor) domain K08M4_28240 PF00672 HAMP domain K08M4_28240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_28250 PF00072 Response regulator receiver domain K08M4_28250 PF00486 Transcriptional regulatory protein, C terminal K08M4_28260 PF01272 Transcription elongation factor, GreA/GreB, C-term K08M4_28260 PF03449 Transcription elongation factor, N-terminal K08M4_28270 PF00575 S1 RNA binding domain K08M4_28270 PF09371 Tex-like protein N-terminal domain K08M4_28270 PF12836 Helix-hairpin-helix motif K08M4_28270 PF16921 K08M4_28270 K08M4_28290 PF00561 alpha/beta hydrolase fold K08M4_28300 PF00156 Phosphoribosyl transferase domain K08M4_28310 PF01106 NifU-like domain K08M4_28310 PF01521 Iron-sulphur cluster biosynthesis K08M4_28320 PF00293 NUDIX domain K08M4_28330 PF00459 Inositol monophosphatase family K08M4_28340 PF01203 K08M4_28340 K08M4_28350 PF04612 Type II secretion system (T2SS), protein M K08M4_28360 PF05134 Type II secretion system (T2SS), protein L K08M4_28360 PF12693 GspL periplasmic domain K08M4_28370 PF03934 Type II secretion system (T2SS), protein K K08M4_28380 PF07963 Prokaryotic N-terminal methylation motif K08M4_28380 PF11612 Type II secretion system (T2SS), protein J K08M4_28390 PF02501 Type II secretion system (T2SS), protein I K08M4_28390 PF07963 Prokaryotic N-terminal methylation motif K08M4_28400 PF07963 Prokaryotic N-terminal methylation motif K08M4_28400 PF12019 Type II transport protein GspH K08M4_28410 PF07963 Prokaryotic N-terminal methylation motif K08M4_28410 PF08334 Type II secretion system (T2SS), protein G K08M4_28420 PF00482 Type II secretion system (T2SS), protein F K08M4_28430 PF00437 Type II/IV secretion system protein K08M4_28440 PF00263 K08M4_28440 K08M4_28440 PF03958 Bacterial type II/III secretion system short domain K08M4_28450 PF11356 Type IV pilus biogenesis K08M4_28460 PF01479 S4 domain K08M4_28470 PF01430 Hsp33 protein K08M4_28480 PF01293 Phosphoenolpyruvate carboxykinase K08M4_28490 PF05170 K08M4_28490 K08M4_28500 PF09500 Putative thioesterase (yiiD_Cterm) K08M4_28500 PF13673 Acetyltransferase (GNAT) domain K08M4_28510 PF02580 D-Tyr-tRNA(Tyr) deacylase K08M4_28520 PF03631 K08M4_28520 K08M4_28530 PF11172 K08M4_28530 K08M4_28540 PF13521 AAA domain K08M4_28550 PF00009 Elongation factor Tu GTP binding domain K08M4_28550 PF00679 Elongation factor G C-terminus K08M4_28550 PF03144 Elongation factor Tu domain 2 K08M4_28560 PF00120 Glutamine synthetase, catalytic domain K08M4_28560 PF03951 Glutamine synthetase, beta-Grasp domain K08M4_28570 PF13511 K08M4_28570 K08M4_28580 PF00512 His Kinase A (phospho-acceptor) domain K08M4_28580 PF00989 PAS fold K08M4_28580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_28590 PF00072 Response regulator receiver domain K08M4_28590 PF00158 Sigma-54 interaction domain K08M4_28590 PF02954 Bacterial regulatory protein, Fis family K08M4_28600 PF00563 EAL domain K08M4_28600 PF00990 GGDEF domain K08M4_28600 PF02743 Cache domain K08M4_28610 PF04055 Radical SAM superfamily K08M4_28610 PF06969 HemN C-terminal domain K08M4_28620 PF10675 K08M4_28620 K08M4_28630 PF04220 K08M4_28630 K08M4_28640 PF13489 Methyltransferase domain K08M4_28650 PF00034 Cytochrome c K08M4_28660 PF01926 50S ribosome-binding GTPase K08M4_28680 PF00476 DNA polymerase family A K08M4_28680 PF01367 5'-3' exonuclease, C-terminal SAM fold K08M4_28680 PF01612 3'-5' exonuclease K08M4_28680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K08M4_28690 PF00583 Acetyltransferase (GNAT) family K08M4_28700 PF00490 Delta-aminolevulinic acid dehydratase K08M4_28710 PF01026 TatD related DNase K08M4_28720 PF00902 Sec-independent protein translocase protein (TatC) K08M4_28730 PF02416 mttA/Hcf106 family K08M4_28740 PF02416 mttA/Hcf106 family K08M4_28750 PF03109 K08M4_28750 K08M4_28760 PF02036 SCP-2 sterol transfer family K08M4_28770 PF01209 ubiE/COQ5 methyltransferase family K08M4_28780 PF02646 K08M4_28780 K08M4_28790 PF00892 EamA-like transporter family K08M4_28800 PF03486 HI0933-like protein K08M4_28830 PF01420 Type I restriction modification DNA specificity domain K08M4_28840 PF02384 N-6 DNA Methylase K08M4_28880 PF00271 Helicase conserved C-terminal domain K08M4_28880 PF04851 Type III restriction enzyme, res subunit K08M4_28900 PF12844 Helix-turn-helix domain K08M4_28910 PF03486 HI0933-like protein K08M4_28920 PF00589 Phage integrase family K08M4_28960 PF03486 HI0933-like protein K08M4_28970 PF10625 K08M4_28970 K08M4_28980 PF00210 Ferritin-like domain K08M4_28990 PF00582 Universal stress protein family K08M4_29000 PF00892 EamA-like transporter family K08M4_29020 PF04445 Putative SAM-dependent methyltransferase K08M4_29030 PF00563 EAL domain K08M4_29030 PF00990 GGDEF domain K08M4_29030 PF13426 PAS domain K08M4_29040 PF01037 AsnC family K08M4_29040 PF13404 AsnC-type helix-turn-helix domain K08M4_29050 PF01432 Peptidase family M3 K08M4_29060 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ K08M4_29070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_29070 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_29100 PF03116 K08M4_29100 K08M4_29120 PF05036 Sporulation related domain K08M4_29130 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_29130 PF12911 K08M4_29130 K08M4_29140 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_29150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_29160 PF00005 ABC transporter K08M4_29160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_29220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_29230 PF00580 UvrD/REP helicase N-terminal domain K08M4_29230 PF13361 UvrD-like helicase C-terminal domain K08M4_29240 PF00440 Bacterial regulatory proteins, tetR family K08M4_29240 PF16295 K08M4_29240 K08M4_29250 PF00529 HlyD family secretion protein K08M4_29250 PF16576 K08M4_29250 K08M4_29260 PF00873 AcrB/AcrD/AcrF family K08M4_29270 PF04380 K08M4_29270 K08M4_29280 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain K08M4_29280 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain K08M4_29290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_29290 PF03466 LysR substrate binding domain K08M4_29300 PF13551 Winged helix-turn helix K08M4_29300 PF13592 K08M4_29300 K08M4_29310 PF13358 DDE superfamily endonuclease K08M4_29400 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_29410 PF07369 Protein of unknown function (DUF1488) K08M4_29420 PF01488 Shikimate / quinate 5-dehydrogenase K08M4_29420 PF08501 Shikimate dehydrogenase substrate binding domain K08M4_29430 PF01218 Coproporphyrinogen III oxidase K08M4_29440 PF01300 Telomere recombination K08M4_29450 PF00731 AIR carboxylase K08M4_29460 PF02222 ATP-grasp domain K08M4_29470 PF01396 K08M4_29470 K08M4_29480 PF04361 K08M4_29480 K08M4_29490 PF02481 DNA recombination-mediator protein A K08M4_29500 PF01476 LysM domain K08M4_29510 PF01327 Polypeptide deformylase K08M4_29520 PF00551 Formyl transferase K08M4_29520 PF02911 Formyl transferase, C-terminal domain K08M4_29530 PF01029 NusB family K08M4_29530 PF01189 NOL1/NOP2/sun family K08M4_29540 PF02080 TrkA-C domain K08M4_29540 PF02254 TrkA-N domain K08M4_29550 PF02386 Cation transport protein K08M4_29560 PF11355 K08M4_29560 K08M4_29570 PF03006 K08M4_29570 K08M4_29580 PF07070 K08M4_29580 K08M4_29600 PF06288 Protein of unknown function (DUF1040) K08M4_29620 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase K08M4_29620 PF12801 K08M4_29620 K08M4_29620 PF13746 4Fe-4S dicluster domain K08M4_29630 PF01636 Phosphotransferase enzyme family K08M4_29640 PF01323 DSBA-like thioredoxin domain K08M4_29650 PF11059 K08M4_29650 K08M4_29660 PF01078 Magnesium chelatase, subunit ChlI K08M4_29660 PF13335 K08M4_29660 K08M4_29660 PF13541 Subunit ChlI of Mg-chelatase K08M4_29670 PF00205 Thiamine pyrophosphate enzyme, central domain K08M4_29670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K08M4_29670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K08M4_29680 PF13710 ACT domain K08M4_29690 PF01063 Aminotransferase class IV K08M4_29700 PF00920 Dehydratase family K08M4_29710 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_29710 PF00585 C-terminal regulatory domain of Threonine dehydratase K08M4_29720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_29720 PF03466 LysR substrate binding domain K08M4_29730 PF07690 Major Facilitator Superfamily K08M4_29740 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_29740 PF12804 MobA-like NTP transferase domain K08M4_29750 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain K08M4_29750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K08M4_29760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_29760 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M4_29770 PF00231 ATP synthase K08M4_29780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K08M4_29780 PF00306 ATP synthase alpha/beta chain, C terminal domain K08M4_29780 PF02874 ATP synthase alpha/beta family, beta-barrel domain K08M4_29790 PF00213 ATP synthase delta (OSCP) subunit K08M4_29800 PF00430 ATP synthase B/B' CF(0) K08M4_29810 PF00137 ATP synthase subunit C K08M4_29820 PF00119 ATP synthase A chain K08M4_29830 PF03899 K08M4_29830 K08M4_29840 PF02195 ParB-like nuclease domain K08M4_29850 PF13614 AAA domain K08M4_29860 PF02527 rRNA small subunit methyltransferase G K08M4_29870 PF01134 Glucose inhibited division protein A K08M4_29870 PF13932 GidA associated domain 3 K08M4_29880 PF00258 Flavodoxin K08M4_29890 PF01926 50S ribosome-binding GTPase K08M4_29890 PF10396 GTP-binding protein TrmE N-terminus K08M4_29890 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE K08M4_29900 PF02096 60Kd inner membrane protein K08M4_29900 PF14849 YidC periplasmic domain K08M4_29910 PF00825 Ribonuclease P K08M4_29920 PF00468 Ribosomal protein L34 K08M4_29930 PF00005 ABC transporter K08M4_29940 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_29950 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_29960 PF13614 AAA domain K08M4_29970 PF02195 ParB-like nuclease domain K08M4_29980 PF05127 Helicase K08M4_29980 PF08351 Domain of unknown function (DUF1726) K08M4_29980 PF13718 GNAT acetyltransferase 2 K08M4_29990 PF03961 K08M4_29990 K08M4_30000 PF13505 Outer membrane protein beta-barrel domain K08M4_30010 PF00884 Sulfatase K08M4_30010 PF08019 K08M4_30010 K08M4_30020 PF01544 CorA-like Mg2+ transporter protein K08M4_30030 PF00924 Mechanosensitive ion channel K08M4_30040 PF00583 Acetyltransferase (GNAT) family K08M4_30060 PF12833 Helix-turn-helix domain K08M4_30080 PF02274 Amidinotransferase K08M4_30090 PF00005 ABC transporter K08M4_30090 PF00664 ABC transporter transmembrane region K08M4_30110 PF01037 AsnC family K08M4_30110 PF13412 Winged helix-turn-helix DNA-binding K08M4_30140 PF00474 Sodium:solute symporter family K08M4_30160 PF00171 Aldehyde dehydrogenase family K08M4_30160 PF01619 Proline dehydrogenase K08M4_30160 PF14850 DNA-binding domain of Proline dehydrogenase K08M4_30170 PF12833 Helix-turn-helix domain K08M4_30180 PF08308 K08M4_30180 K08M4_30190 PF03781 Sulfatase-modifying factor enzyme 1 K08M4_30190 PF08308 K08M4_30190 K08M4_30200 PF00196 Bacterial regulatory proteins, luxR family K08M4_30200 PF08448 PAS fold K08M4_30210 PF01243 Pyridoxamine 5'-phosphate oxidase K08M4_30210 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K08M4_30220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_30220 PF02743 Cache domain K08M4_30230 PF00072 Response regulator receiver domain K08M4_30230 PF02954 Bacterial regulatory protein, Fis family K08M4_30230 PF14532 Sigma-54 interaction domain K08M4_30240 PF02321 Outer membrane efflux protein K08M4_30240 PF13437 HlyD family secretion protein K08M4_30240 PF13533 Biotin-lipoyl like K08M4_30250 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP K08M4_30260 PF00563 EAL domain K08M4_30260 PF00990 GGDEF domain K08M4_30260 PF16448 K08M4_30260 K08M4_30270 PF00005 ABC transporter K08M4_30270 PF00664 ABC transporter transmembrane region K08M4_30280 PF06291 K08M4_30280 K08M4_30290 PF00512 His Kinase A (phospho-acceptor) domain K08M4_30290 PF00672 HAMP domain K08M4_30290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_30300 PF00072 Response regulator receiver domain K08M4_30300 PF00486 Transcriptional regulatory protein, C terminal K08M4_30320 PF00440 Bacterial regulatory proteins, tetR family K08M4_30320 PF13977 Bacterial transcriptional repressor K08M4_30330 PF00171 Aldehyde dehydrogenase family K08M4_30340 PF00732 GMC oxidoreductase K08M4_30340 PF05199 GMC oxidoreductase K08M4_30350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K08M4_30360 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_30370 PF00005 ABC transporter K08M4_30380 PF01047 MarR family K08M4_30390 PF00805 Pentapeptide repeats (8 copies) K08M4_30390 PF13599 Pentapeptide repeats (9 copies) K08M4_30400 PF16691 K08M4_30400 K08M4_30410 PF00583 Acetyltransferase (GNAT) family K08M4_30420 PF00202 Aminotransferase class-III K08M4_30430 PF06339 K08M4_30430 K08M4_30440 PF00696 Amino acid kinase family K08M4_30450 PF00158 Sigma-54 interaction domain K08M4_30450 PF02954 Bacterial regulatory protein, Fis family K08M4_30460 PF04972 BON domain K08M4_30470 PF07043 K08M4_30470 K08M4_30490 PF01814 Hemerythrin HHE cation binding domain K08M4_30500 PF00781 Diacylglycerol kinase catalytic domain K08M4_30500 PF00782 Dual specificity phosphatase, catalytic domain K08M4_30510 PF00924 Mechanosensitive ion channel K08M4_30570 PF01594 K08M4_30570 K08M4_30600 PF02600 Disulfide bond formation protein DsbB K08M4_30610 PF01081 KDPG and KHG aldolase K08M4_30620 PF00294 pfkB family carbohydrate kinase K08M4_30630 PF00367 phosphotransferase system, EIIB K08M4_30630 PF02378 Phosphotransferase system, EIIC K08M4_30640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K08M4_30640 PF13378 Enolase C-terminal domain-like K08M4_30650 PF16966 K08M4_30650 K08M4_30660 PF00392 Bacterial regulatory proteins, gntR family K08M4_30660 PF07702 UTRA domain K08M4_30670 PF13419 Haloacid dehalogenase-like hydrolase K08M4_30680 PF12464 Maltose acetyltransferase K08M4_30680 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_30690 PF00962 Adenosine/AMP deaminase K08M4_30700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_30700 PF03466 LysR substrate binding domain K08M4_30710 PF02311 AraC-like ligand binding domain K08M4_30710 PF12833 Helix-turn-helix domain K08M4_30720 PF07690 Major Facilitator Superfamily K08M4_30730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_30730 PF12793 K08M4_30730 K08M4_30740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K08M4_30750 PF02574 Homocysteine S-methyltransferase K08M4_30790 PF00753 Metallo-beta-lactamase superfamily K08M4_30790 PF14863 Alkyl sulfatase dimerisation K08M4_30790 PF14864 Alkyl sulfatase C-terminal K08M4_30800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_30800 PF03466 LysR substrate binding domain K08M4_30810 PF00892 EamA-like transporter family K08M4_30820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_30830 PF00232 Glycosyl hydrolase family 1 K08M4_30840 PF00356 Bacterial regulatory proteins, lacI family K08M4_30840 PF13377 Periplasmic binding protein-like domain K08M4_30850 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_30850 PF12464 Maltose acetyltransferase K08M4_30850 PF14602 Hexapeptide repeat of succinyl-transferase K08M4_30860 PF07690 Major Facilitator Superfamily K08M4_30870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_30870 PF03466 LysR substrate binding domain K08M4_30890 PF01872 RibD C-terminal domain K08M4_30900 PF00440 Bacterial regulatory proteins, tetR family K08M4_30900 PF02909 Tetracyclin repressor, C-terminal all-alpha domain K08M4_30910 PF13091 PLD-like domain K08M4_30920 PF00881 Nitroreductase family K08M4_30930 PF06863 Protein of unknown function (DUF1254) K08M4_30940 PF04055 Radical SAM superfamily K08M4_30940 PF13353 4Fe-4S single cluster domain K08M4_30950 PF06742 Protein of unknown function (DUF1214) K08M4_30960 PF04325 Protein of unknown function (DUF465) K08M4_30970 PF01266 FAD dependent oxidoreductase K08M4_30970 PF16901 K08M4_30970 K08M4_30980 PF00455 K08M4_30980 K08M4_30980 PF08220 DeoR-like helix-turn-helix domain K08M4_30990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K08M4_30990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K08M4_31000 PF00230 Major intrinsic protein K08M4_31010 PF00005 ABC transporter K08M4_31010 PF00664 ABC transporter transmembrane region K08M4_31010 PF03412 Peptidase C39 family K08M4_31020 PF13437 HlyD family secretion protein K08M4_31030 PF00005 ABC transporter K08M4_31030 PF00664 ABC transporter transmembrane region K08M4_31050 PF02794 K08M4_31050 K08M4_31060 PF07634 K08M4_31060 K08M4_31060 PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 K08M4_31060 PF11713 Peptidase C80 family K08M4_31060 PF12146 Putative lysophospholipase K08M4_31070 PF05232 K08M4_31070 K08M4_31080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_31080 PF03466 LysR substrate binding domain K08M4_31090 PF01758 Sodium Bile acid symporter family K08M4_31100 PF01022 Bacterial regulatory protein, arsR family K08M4_31110 PF04982 K08M4_31110 K08M4_31120 PF00440 Bacterial regulatory proteins, tetR family K08M4_31130 PF08282 haloacid dehalogenase-like hydrolase K08M4_31140 PF01323 DSBA-like thioredoxin domain K08M4_31150 PF06224 K08M4_31150 K08M4_31160 PF00589 Phage integrase family K08M4_31160 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_31170 PF04986 K08M4_31170 K08M4_31170 PF14319 K08M4_31170 K08M4_31180 PF06224 K08M4_31180 K08M4_31220 PF13483 Beta-lactamase superfamily domain K08M4_31230 PF00455 K08M4_31230 K08M4_31230 PF08220 DeoR-like helix-turn-helix domain K08M4_31240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_31240 PF03611 K08M4_31240 K08M4_31250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_31260 PF00596 Class II Aldolase and Adducin N-terminal domain K08M4_31270 PF08282 haloacid dehalogenase-like hydrolase K08M4_31280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K08M4_31290 PF01261 Xylose isomerase-like TIM barrel K08M4_31310 PF02595 Glycerate kinase family K08M4_31320 PF00199 Catalase K08M4_31320 PF06628 Catalase-related immune-responsive K08M4_31340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K08M4_31340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K08M4_31350 PF09313 Domain of unknown function (DUF1971) K08M4_31360 PF00175 Oxidoreductase NAD-binding domain K08M4_31360 PF00970 Oxidoreductase FAD-binding domain K08M4_31370 PF01553 Acyltransferase K08M4_31380 PF12847 Methyltransferase domain K08M4_31390 PF00990 GGDEF domain K08M4_31400 PF00128 Alpha amylase, catalytic domain K08M4_31400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M4_31410 PF02264 LamB porin K08M4_31420 PF07148 K08M4_31420 K08M4_31430 PF00756 Putative esterase K08M4_31440 PF06202 Amylo-alpha-1,6-glucosidase K08M4_31450 PF13416 Bacterial extracellular solute-binding protein K08M4_31460 PF00128 Alpha amylase, catalytic domain K08M4_31460 PF16657 K08M4_31460 K08M4_31470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_31470 PF03466 LysR substrate binding domain K08M4_31490 PF05016 Plasmid stabilisation system protein K08M4_31510 PF08238 Sel1 repeat K08M4_31530 PF00128 Alpha amylase, catalytic domain K08M4_31540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M4_31540 PF03714 Bacterial pullanase-associated domain K08M4_31540 PF11852 Domain of unknown function (DUF3372) K08M4_31550 PF06961 K08M4_31550 K08M4_31560 PF01810 K08M4_31560 K08M4_31570 PF01037 AsnC family K08M4_31570 PF13412 Winged helix-turn-helix DNA-binding K08M4_31580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_31580 PF03466 LysR substrate binding domain K08M4_31590 PF08238 Sel1 repeat K08M4_31600 PF00375 Sodium:dicarboxylate symporter family K08M4_31610 PF03193 Protein of unknown function, DUF258 K08M4_31620 PF04314 Protein of unknown function (DUF461) K08M4_31630 PF02630 SCO1/SenC K08M4_31650 PF04018 K08M4_31650 K08M4_31660 PF00196 Bacterial regulatory proteins, luxR family K08M4_31670 PF00343 Carbohydrate phosphorylase K08M4_31680 PF02446 4-alpha-glucanotransferase K08M4_31690 PF00128 Alpha amylase, catalytic domain K08M4_31690 PF02806 Alpha amylase, C-terminal all-beta domain K08M4_31690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K08M4_31700 PF02361 Cobalt transport protein K08M4_31710 PF00005 ABC transporter K08M4_31710 PF12558 K08M4_31710 K08M4_31720 PF07155 ECF-type riboflavin transporter, S component K08M4_31730 PF13533 Biotin-lipoyl like K08M4_31740 PF11742 K08M4_31740 K08M4_31750 PF00892 EamA-like transporter family K08M4_31760 PF00990 GGDEF domain K08M4_31790 PF01048 Phosphorylase superfamily K08M4_31800 PF01476 LysM domain K08M4_31800 PF03734 L,D-transpeptidase catalytic domain K08M4_31810 PF04728 Lipoprotein leucine-zipper K08M4_31820 PF00270 DEAD/DEAH box helicase K08M4_31820 PF00271 Helicase conserved C-terminal domain K08M4_31830 PF00657 GDSL-like Lipase/Acylhydrolase K08M4_31840 PF00561 alpha/beta hydrolase fold K08M4_31850 PF03280 Proteobacterial lipase chaperone protein K08M4_31860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_31860 PF00672 HAMP domain K08M4_31870 PF12849 PBP superfamily domain K08M4_31880 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_31890 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_31900 PF00005 ABC transporter K08M4_31910 PF00990 GGDEF domain K08M4_31920 PF13584 K08M4_31920 K08M4_31930 PF00515 Tetratricopeptide repeat K08M4_31930 PF13519 von Willebrand factor type A domain K08M4_31940 PF00092 von Willebrand factor type A domain K08M4_31950 PF14316 K08M4_31950 K08M4_31960 PF01882 K08M4_31960 K08M4_31970 PF07726 ATPase family associated with various cellular activities (AAA) K08M4_31980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_31980 PF00672 HAMP domain K08M4_32000 PF01609 Transposase DDE domain K08M4_32000 PF13006 K08M4_32000 K08M4_32010 PF00005 ABC transporter K08M4_32010 PF08402 TOBE domain K08M4_32020 PF13416 Bacterial extracellular solute-binding protein K08M4_32030 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_32030 PF14785 Maltose transport system permease protein MalF P2 domain K08M4_32040 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_32070 PF03061 Thioesterase superfamily K08M4_32080 PF01609 Transposase DDE domain K08M4_32080 PF13006 K08M4_32080 K08M4_32090 PF00892 EamA-like transporter family K08M4_32100 PF12833 Helix-turn-helix domain K08M4_32120 PF06742 Protein of unknown function (DUF1214) K08M4_32130 PF02355 Protein export membrane protein K08M4_32130 PF07549 SecD/SecF GG Motif K08M4_32130 PF13721 SecD export protein N-terminal TM region K08M4_32140 PF02355 Protein export membrane protein K08M4_32140 PF07549 SecD/SecF GG Motif K08M4_32160 PF00924 Mechanosensitive ion channel K08M4_32170 PF13533 Biotin-lipoyl like K08M4_32180 PF00873 AcrB/AcrD/AcrF family K08M4_32190 PF01914 K08M4_32190 K08M4_32200 PF01769 Divalent cation transporter K08M4_32200 PF03448 MgtE intracellular N domain K08M4_32210 PF09335 K08M4_32210 K08M4_32220 PF01699 Sodium/calcium exchanger protein K08M4_32230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_32230 PF03466 LysR substrate binding domain K08M4_32240 PF07143 Hydroxyneurosporene synthase (CrtC) K08M4_32240 PF17186 K08M4_32240 K08M4_32250 PF02687 K08M4_32250 K08M4_32260 PF00005 ABC transporter K08M4_32270 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein K08M4_32280 PF00672 HAMP domain K08M4_32280 PF00990 GGDEF domain K08M4_32290 PF00563 EAL domain K08M4_32290 PF00990 GGDEF domain K08M4_32300 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_32300 PF13602 Zinc-binding dehydrogenase K08M4_32310 PF05721 Phytanoyl-CoA dioxygenase (PhyH) K08M4_32330 PF00990 GGDEF domain K08M4_32360 PF00072 Response regulator receiver domain K08M4_32360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_32370 PF17327 K08M4_32370 K08M4_32380 PF00031 Cystatin domain K08M4_32400 PF00463 Isocitrate lyase family K08M4_32410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_32410 PF03466 LysR substrate binding domain K08M4_32420 PF01274 Malate synthase K08M4_32430 PF00171 Aldehyde dehydrogenase family K08M4_32450 PF02028 BCCT family transporter K08M4_32460 PF00246 Zinc carboxypeptidase K08M4_32470 PF05661 K08M4_32470 K08M4_32480 PF01979 Amidohydrolase family K08M4_32490 PF01679 K08M4_32490 K08M4_32500 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_32500 PF00175 Oxidoreductase NAD-binding domain K08M4_32500 PF00970 Oxidoreductase FAD-binding domain K08M4_32500 PF03473 MOSC domain K08M4_32500 PF03476 MOSC N-terminal beta barrel domain K08M4_32510 PF02540 NAD synthase K08M4_32520 PF01467 Cytidylyltransferase K08M4_32550 PF01553 Acyltransferase K08M4_32570 PF07383 K08M4_32570 K08M4_32580 PF04175 Protein of unknown function (DUF406) K08M4_32590 PF00440 Bacterial regulatory proteins, tetR family K08M4_32600 PF00005 ABC transporter K08M4_32610 PF01032 FecCD transport family K08M4_32620 PF01497 Periplasmic binding protein K08M4_32630 PF02472 Biopolymer transport protein ExbD/TolR K08M4_32640 PF01618 K08M4_32640 K08M4_32650 PF03544 Gram-negative bacterial TonB protein C-terminal K08M4_32660 PF04055 Radical SAM superfamily K08M4_32670 PF06228 Haem utilisation ChuX/HutX K08M4_32680 PF01243 Pyridoxamine 5'-phosphate oxidase K08M4_32690 PF00072 Response regulator receiver domain K08M4_32690 PF01584 CheW-like domain K08M4_32700 PF13616 PPIC-type PPIASE domain K08M4_32710 PF00128 Alpha amylase, catalytic domain K08M4_32720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_32720 PF00672 HAMP domain K08M4_32720 PF02743 Cache domain K08M4_32730 PF07670 Nucleoside recognition K08M4_32740 PF06912 K08M4_32740 K08M4_32750 PF04828 Glutathione-dependent formaldehyde-activating enzyme K08M4_32770 PF16561 K08M4_32770 K08M4_32780 PF01551 Peptidase family M23 K08M4_32780 PF04225 Opacity-associated protein A LysM-like domain K08M4_32790 PF00563 EAL domain K08M4_32790 PF00990 GGDEF domain K08M4_32800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_32800 PF03466 LysR substrate binding domain K08M4_32810 PF07690 Major Facilitator Superfamily K08M4_32840 PF00462 Glutaredoxin K08M4_32850 PF00892 EamA-like transporter family K08M4_32860 PF13609 Gram-negative porin K08M4_32880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K08M4_32890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_32900 PF03611 K08M4_32900 K08M4_32910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_32940 PF01773 Na+ dependent nucleoside transporter N-terminus K08M4_32940 PF07662 Na+ dependent nucleoside transporter C-terminus K08M4_32940 PF07670 Nucleoside recognition K08M4_32960 PF13649 Methyltransferase domain K08M4_32970 PF12060 K08M4_32970 K08M4_32980 PF00990 GGDEF domain K08M4_32980 PF03924 CHASE domain K08M4_32990 PF00270 DEAD/DEAH box helicase K08M4_32990 PF00271 Helicase conserved C-terminal domain K08M4_33000 PF01381 Helix-turn-helix K08M4_33000 PF06114 Domain of unknown function (DUF955) K08M4_33000 PF12268 K08M4_33000 K08M4_33020 PF00990 GGDEF domain K08M4_33030 PF00313 'Cold-shock' DNA-binding domain K08M4_33040 PF07969 Amidohydrolase family K08M4_33050 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin K08M4_33090 PF12625 K08M4_33090 K08M4_33090 PF12833 Helix-turn-helix domain K08M4_33100 PF03253 Urea transporter K08M4_33110 PF12900 Pyridoxamine 5'-phosphate oxidase K08M4_33120 PF00155 Aminotransferase class I and II K08M4_33120 PF00392 Bacterial regulatory proteins, gntR family K08M4_33130 PF13520 Amino acid permease K08M4_33140 PF01037 AsnC family K08M4_33140 PF13404 AsnC-type helix-turn-helix domain K08M4_33150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_33150 PF03466 LysR substrate binding domain K08M4_33160 PF01810 K08M4_33160 K08M4_33170 PF12146 Putative lysophospholipase K08M4_33190 PF03063 Prismane/CO dehydrogenase family K08M4_33200 PF00111 2Fe-2S iron-sulfur cluster binding domain K08M4_33200 PF00175 Oxidoreductase NAD-binding domain K08M4_33200 PF00970 Oxidoreductase FAD-binding domain K08M4_33210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K08M4_33210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K08M4_33220 PF00072 Response regulator receiver domain K08M4_33220 PF00512 His Kinase A (phospho-acceptor) domain K08M4_33220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_33230 PF04363 K08M4_33230 K08M4_33250 PF04337 Protein of unknown function, DUF480 K08M4_33260 PF01541 GIY-YIG catalytic domain K08M4_33270 PF13407 Periplasmic binding protein domain K08M4_33280 PF00072 Response regulator receiver domain K08M4_33280 PF00512 His Kinase A (phospho-acceptor) domain K08M4_33280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_33280 PF09308 LuxQ, periplasmic K08M4_33290 PF07238 PilZ domain K08M4_33290 PF12945 Flagellar protein YcgR K08M4_33300 PF08888 HopJ type III effector protein K08M4_33310 PF00012 Hsp70 protein K08M4_33320 PF00267 Gram-negative porin K08M4_33330 PF01557 Fumarylacetoacetate (FAA) hydrolase family K08M4_33340 PF01810 K08M4_33340 K08M4_33350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_33350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_33350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_33350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_33360 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K08M4_33360 PF02790 Cytochrome C oxidase subunit II, transmembrane domain K08M4_33360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_33370 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M4_33380 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 K08M4_33390 PF00510 Cytochrome c oxidase subunit III K08M4_33400 PF11137 K08M4_33400 K08M4_33410 PF02104 K08M4_33410 K08M4_33430 PF02628 K08M4_33430 K08M4_33440 PF01040 UbiA prenyltransferase family K08M4_33460 PF11769 K08M4_33460 K08M4_33470 PF12843 K08M4_33470 K08M4_33490 PF06296 K08M4_33490 K08M4_33500 PF15731 K08M4_33500 K08M4_33560 PF00793 DAHP synthetase I family K08M4_33570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K08M4_33570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K08M4_33570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K08M4_33570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K08M4_33580 PF00483 Nucleotidyl transferase K08M4_33580 PF01050 Mannose-6-phosphate isomerase K08M4_33590 PF00924 Mechanosensitive ion channel K08M4_33600 PF02254 TrkA-N domain K08M4_33610 PF02386 Cation transport protein K08M4_33620 PF01625 Peptide methionine sulfoxide reductase K08M4_33620 PF01641 SelR domain K08M4_33630 PF02566 OsmC-like protein K08M4_33640 PF00691 OmpA family K08M4_33640 PF01389 OmpA-like transmembrane domain K08M4_33650 PF13419 Haloacid dehalogenase-like hydrolase K08M4_33660 PF00202 Aminotransferase class-III K08M4_33670 PF00266 Aminotransferase class-V K08M4_33680 PF13343 Bacterial extracellular solute-binding protein K08M4_33690 PF01266 FAD dependent oxidoreductase K08M4_33700 PF00005 ABC transporter K08M4_33710 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_33720 PF00392 Bacterial regulatory proteins, gntR family K08M4_33720 PF07702 UTRA domain K08M4_33730 PF00892 EamA-like transporter family K08M4_33740 PF03480 Bacterial extracellular solute-binding protein, family 7 K08M4_33750 PF04290 K08M4_33750 K08M4_33760 PF06808 K08M4_33760 K08M4_33770 PF01202 Shikimate kinase K08M4_33780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K08M4_33780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_33790 PF03575 Peptidase family S51 K08M4_33800 PF00356 Bacterial regulatory proteins, lacI family K08M4_33800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M4_33810 PF04954 Siderophore-interacting protein K08M4_33810 PF08021 Siderophore-interacting FAD-binding domain K08M4_33820 PF00854 POT family K08M4_33830 PF03313 K08M4_33830 K08M4_33830 PF03315 Serine dehydratase beta chain K08M4_33840 PF02698 DUF218 domain K08M4_33850 PF03891 K08M4_33850 K08M4_33860 PF00293 NUDIX domain K08M4_33870 PF16130 K08M4_33870 K08M4_33890 PF00005 ABC transporter K08M4_33890 PF00664 ABC transporter transmembrane region K08M4_33900 PF00005 ABC transporter K08M4_33900 PF00664 ABC transporter transmembrane region K08M4_33910 PF14863 Alkyl sulfatase dimerisation K08M4_33920 PF01551 Peptidase family M23 K08M4_33930 PF01906 Putative heavy-metal-binding K08M4_33950 PF07361 Cytochrome b562 K08M4_33970 PF03929 K08M4_33970 K08M4_33980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_33990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_33990 PF03466 LysR substrate binding domain K08M4_34000 PF05995 Cysteine dioxygenase type I K08M4_34010 PF16576 K08M4_34010 K08M4_34020 PF02321 Outer membrane efflux protein K08M4_34030 PF02687 K08M4_34030 K08M4_34030 PF12704 MacB-like periplasmic core domain K08M4_34040 PF02687 K08M4_34040 K08M4_34040 PF12704 MacB-like periplasmic core domain K08M4_34050 PF00005 ABC transporter K08M4_34070 PF00563 EAL domain K08M4_34080 PF00155 Aminotransferase class I and II K08M4_34090 PF00107 Zinc-binding dehydrogenase K08M4_34090 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_34100 PF00999 Sodium/hydrogen exchanger family K08M4_34100 PF02254 TrkA-N domain K08M4_34110 PF02525 Flavodoxin-like fold K08M4_34120 PF01212 Beta-eliminating lyase K08M4_34140 PF03733 K08M4_34140 K08M4_34170 PF00465 Iron-containing alcohol dehydrogenase K08M4_34190 PF13419 Haloacid dehalogenase-like hydrolase K08M4_34200 PF00892 EamA-like transporter family K08M4_34210 PF00990 GGDEF domain K08M4_34210 PF13185 GAF domain K08M4_34220 PF01545 Cation efflux family K08M4_34240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_34240 PF03466 LysR substrate binding domain K08M4_34250 PF13489 Methyltransferase domain K08M4_34260 PF01609 Transposase DDE domain K08M4_34260 PF13006 K08M4_34260 K08M4_34270 PF00801 PKD domain K08M4_34270 PF05547 K08M4_34270 K08M4_34300 PF01037 AsnC family K08M4_34300 PF13412 Winged helix-turn-helix DNA-binding K08M4_34310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_34310 PF08447 PAS fold K08M4_34320 PF00456 Transketolase, thiamine diphosphate binding domain K08M4_34320 PF02779 Transketolase, pyrimidine binding domain K08M4_34320 PF02780 Transketolase, C-terminal domain K08M4_34330 PF00923 Transaldolase K08M4_34340 PF04198 Putative sugar-binding domain K08M4_34350 PF05547 K08M4_34350 K08M4_34360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_34370 PF01478 Type IV leader peptidase family K08M4_34380 PF04964 K08M4_34380 K08M4_34400 PF00263 K08M4_34400 K08M4_34400 PF13629 K08M4_34400 K08M4_34420 PF13614 AAA domain K08M4_34430 PF00437 Type II/IV secretion system protein K08M4_34440 PF00482 Type II secretion system (T2SS), protein F K08M4_34450 PF00482 Type II secretion system (T2SS), protein F K08M4_34470 PF07811 K08M4_34470 K08M4_34480 PF16964 K08M4_34480 K08M4_34490 PF00092 von Willebrand factor type A domain K08M4_34500 PF00691 OmpA family K08M4_34510 PF00563 EAL domain K08M4_34510 PF00990 GGDEF domain K08M4_34520 PF00581 Rhodanese-like domain K08M4_34550 PF16130 K08M4_34550 K08M4_34560 PF00899 ThiF family K08M4_34570 PF00994 Probable molybdopterin binding domain K08M4_34570 PF03453 MoeA N-terminal region (domain I and II) K08M4_34570 PF03454 MoeA C-terminal region (domain IV) K08M4_34580 PF01227 GTP cyclohydrolase I K08M4_34590 PF03577 K08M4_34590 K08M4_34610 PF07152 YaeQ protein K08M4_34620 PF00313 'Cold-shock' DNA-binding domain K08M4_34630 PF07995 Glucose / Sorbosone dehydrogenase K08M4_34640 PF07690 Major Facilitator Superfamily K08M4_34650 PF00005 ABC transporter K08M4_34670 PF12833 Helix-turn-helix domain K08M4_34670 PF14526 Integron-associated effector binding protein K08M4_34680 PF00593 TonB dependent receptor K08M4_34680 PF07715 TonB-dependent Receptor Plug Domain K08M4_34690 PF01497 Periplasmic binding protein K08M4_34700 PF01032 FecCD transport family K08M4_34710 PF00378 Enoyl-CoA hydratase/isomerase family K08M4_34720 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_34740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_34750 PF00132 Bacterial transferase hexapeptide (six repeats) K08M4_34760 PF00664 ABC transporter transmembrane region K08M4_34770 PF00005 ABC transporter K08M4_34770 PF00664 ABC transporter transmembrane region K08M4_34780 PF13437 HlyD family secretion protein K08M4_34780 PF13533 Biotin-lipoyl like K08M4_34790 PF05345 Putative Ig domain K08M4_34810 PF02321 Outer membrane efflux protein K08M4_34820 PF11604 Copper binding periplasmic protein CusF K08M4_34820 PF16576 K08M4_34820 K08M4_34830 PF00873 AcrB/AcrD/AcrF family K08M4_34890 PF06738 K08M4_34890 K08M4_34890 PF12821 K08M4_34890 K08M4_34900 PF03831 PhnA protein K08M4_34900 PF08274 PhnA Zinc-Ribbon K08M4_34910 PF13508 Acetyltransferase (GNAT) domain K08M4_34920 PF03747 ADP-ribosylglycohydrolase K08M4_34930 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_34940 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_34950 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_34960 PF00005 ABC transporter K08M4_34970 PF00465 Iron-containing alcohol dehydrogenase K08M4_34980 PF06719 K08M4_34980 K08M4_34980 PF12833 Helix-turn-helix domain K08M4_34990 PF01042 Endoribonuclease L-PSP K08M4_35020 PF00563 EAL domain K08M4_35060 PF13302 Acetyltransferase (GNAT) domain K08M4_35070 PF01042 Endoribonuclease L-PSP K08M4_35080 PF02028 BCCT family transporter K08M4_35090 PF00704 Glycosyl hydrolases family 18 K08M4_35090 PF06483 K08M4_35090 K08M4_35090 PF14600 Cellulose-binding domain K08M4_35100 PF00990 GGDEF domain K08M4_35100 PF08269 Cache domain K08M4_35110 PF10688 K08M4_35110 K08M4_35120 PF13590 Domain of unknown function (DUF4136) K08M4_35130 PF00768 D-alanyl-D-alanine carboxypeptidase K08M4_35130 PF07943 Penicillin-binding protein 5, C-terminal domain K08M4_35140 PF03692 K08M4_35140 K08M4_35150 PF00849 RNA pseudouridylate synthase K08M4_35160 PF00043 Glutathione S-transferase, C-terminal domain K08M4_35160 PF02798 Glutathione S-transferase, N-terminal domain K08M4_35170 PF00107 Zinc-binding dehydrogenase K08M4_35170 PF16884 K08M4_35170 K08M4_35180 PF00440 Bacterial regulatory proteins, tetR family K08M4_35180 PF16925 K08M4_35180 K08M4_35190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K08M4_35190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K08M4_35200 PF13462 Thioredoxin K08M4_35210 PF00691 OmpA family K08M4_35220 PF13417 Glutathione S-transferase, N-terminal domain K08M4_35230 PF00158 Sigma-54 interaction domain K08M4_35230 PF01590 GAF domain K08M4_35240 PF00042 Globin K08M4_35240 PF00175 Oxidoreductase NAD-binding domain K08M4_35240 PF00970 Oxidoreductase FAD-binding domain K08M4_35250 PF03595 Voltage-dependent anion channel K08M4_35260 PF00654 Voltage gated chloride channel K08M4_35270 PF02492 CobW/HypB/UreG, nucleotide-binding domain K08M4_35280 PF00270 DEAD/DEAH box helicase K08M4_35280 PF00271 Helicase conserved C-terminal domain K08M4_35290 PF01810 K08M4_35290 K08M4_35300 PF05787 Bacterial protein of unknown function (DUF839) K08M4_35320 PF04320 K08M4_35320 K08M4_35340 PF06468 Spondin_N K08M4_35350 PF06468 Spondin_N K08M4_35360 PF00072 Response regulator receiver domain K08M4_35360 PF00486 Transcriptional regulatory protein, C terminal K08M4_35370 PF00512 His Kinase A (phospho-acceptor) domain K08M4_35390 PF00892 EamA-like transporter family K08M4_35400 PF01037 AsnC family K08M4_35400 PF13412 Winged helix-turn-helix DNA-binding K08M4_35440 PF01966 HD domain K08M4_35440 PF11871 K08M4_35440 K08M4_35450 PF09574 K08M4_35450 K08M4_35460 PF03264 NapC/NirT cytochrome c family, N-terminal region K08M4_35470 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) K08M4_35480 PF00384 Molybdopterin oxidoreductase K08M4_35480 PF01568 Molydopterin dinucleotide binding domain K08M4_35480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M4_35490 PF03927 NapD protein K08M4_35500 PF00037 4Fe-4S binding domain K08M4_35500 PF13187 4Fe-4S dicluster domain K08M4_35510 PF00672 HAMP domain K08M4_35510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_35510 PF07730 Histidine kinase K08M4_35510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term K08M4_35520 PF00072 Response regulator receiver domain K08M4_35520 PF00196 Bacterial regulatory proteins, luxR family K08M4_35530 PF03606 K08M4_35530 K08M4_35540 PF03992 Antibiotic biosynthesis monooxygenase K08M4_35550 PF00487 K08M4_35550 K08M4_35560 PF00583 Acetyltransferase (GNAT) family K08M4_35570 PF01926 50S ribosome-binding GTPase K08M4_35580 PF00034 Cytochrome c K08M4_35590 PF00196 Bacterial regulatory proteins, luxR family K08M4_35610 PF00577 Outer membrane usher protein K08M4_35660 PF01212 Beta-eliminating lyase K08M4_35670 PF00293 NUDIX domain K08M4_35680 PF07728 AAA domain (dynein-related subfamily) K08M4_35680 PF12592 Protein of unknown function (DUF3763) K08M4_35690 PF05762 VWA domain containing CoxE-like protein K08M4_35710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_35710 PF00672 HAMP domain K08M4_35710 PF02743 Cache domain K08M4_35720 PF01764 Lipase (class 3) K08M4_35800 PF00034 Cytochrome c K08M4_35800 PF03150 Di-haem cytochrome c peroxidase K08M4_35810 PF03150 Di-haem cytochrome c peroxidase K08M4_35820 PF00355 Rieske [2Fe-2S] domain K08M4_35820 PF10518 TAT (twin-arginine translocation) pathway signal sequence K08M4_35830 PF00384 Molybdopterin oxidoreductase K08M4_35830 PF01568 Molydopterin dinucleotide binding domain K08M4_35840 PF05425 K08M4_35840 K08M4_35850 PF00127 Copper binding proteins, plastocyanin/azurin family K08M4_35860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_35860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_35860 PF04324 BFD-like [2Fe-2S] binding domain K08M4_35860 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_35870 PF13806 Rieske-like [2Fe-2S] domain K08M4_35880 PF01226 Formate/nitrite transporter K08M4_35890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_35900 PF13778 K08M4_35900 K08M4_35910 PF01936 NYN domain K08M4_35920 PF00072 Response regulator receiver domain K08M4_35920 PF00486 Transcriptional regulatory protein, C terminal K08M4_35930 PF00512 His Kinase A (phospho-acceptor) domain K08M4_35930 PF00672 HAMP domain K08M4_35930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_35930 PF16750 K08M4_35930 K08M4_35940 PF00375 Sodium:dicarboxylate symporter family K08M4_35950 PF00593 TonB dependent receptor K08M4_35950 PF07715 TonB-dependent Receptor Plug Domain K08M4_35960 PF11932 K08M4_35960 K08M4_35970 PF01618 K08M4_35970 K08M4_35980 PF01618 K08M4_35980 K08M4_35990 PF02472 Biopolymer transport protein ExbD/TolR K08M4_36000 PF03544 Gram-negative bacterial TonB protein C-terminal K08M4_36060 PF10029 K08M4_36060 K08M4_36080 PF10670 K08M4_36080 K08M4_36110 PF01297 Periplasmic solute binding protein family K08M4_36150 PF00950 K08M4_36150 K08M4_36160 PF00950 K08M4_36160 K08M4_36180 PF11661 K08M4_36180 K08M4_36210 PF05425 K08M4_36210 K08M4_36230 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_36240 PF04324 BFD-like [2Fe-2S] binding domain K08M4_36240 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_36250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_36250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_36260 PF13806 Rieske-like [2Fe-2S] domain K08M4_36290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_36300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K08M4_36310 PF13778 K08M4_36310 K08M4_36340 PF00072 Response regulator receiver domain K08M4_36340 PF00486 Transcriptional regulatory protein, C terminal K08M4_36350 PF00512 His Kinase A (phospho-acceptor) domain K08M4_36350 PF00672 HAMP domain K08M4_36350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_36350 PF16750 K08M4_36350 K08M4_36360 PF00375 Sodium:dicarboxylate symporter family K08M4_36370 PF00593 TonB dependent receptor K08M4_36370 PF07715 TonB-dependent Receptor Plug Domain K08M4_36380 PF11932 K08M4_36380 K08M4_36390 PF01618 K08M4_36390 K08M4_36400 PF01618 K08M4_36400 K08M4_36410 PF02472 Biopolymer transport protein ExbD/TolR K08M4_36420 PF03544 Gram-negative bacterial TonB protein C-terminal K08M4_36460 PF16357 K08M4_36460 K08M4_36470 PF10029 K08M4_36470 K08M4_36480 PF10670 K08M4_36480 K08M4_36510 PF01297 Periplasmic solute binding protein family K08M4_36520 PF00005 ABC transporter K08M4_36530 PF00950 K08M4_36530 K08M4_36550 PF11661 K08M4_36550 K08M4_36560 PF11756 K08M4_36560 K08M4_36570 PF01554 MatE K08M4_36580 PF12833 Helix-turn-helix domain K08M4_36590 PF00486 Transcriptional regulatory protein, C terminal K08M4_36610 PF07690 Major Facilitator Superfamily K08M4_36630 PF12625 K08M4_36630 K08M4_36630 PF12833 Helix-turn-helix domain K08M4_36640 PF00501 AMP-binding enzyme K08M4_36640 PF13193 AMP-binding enzyme C-terminal domain K08M4_36650 PF00732 GMC oxidoreductase K08M4_36650 PF05199 GMC oxidoreductase K08M4_36660 PF00085 Thioredoxin K08M4_36670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K08M4_36670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K08M4_36680 PF13692 Glycosyl transferases group 1 K08M4_36690 PF04143 K08M4_36690 K08M4_36710 PF03372 Endonuclease/Exonuclease/phosphatase family K08M4_36720 PF03477 ATP cone domain K08M4_36720 PF13597 Anaerobic ribonucleoside-triphosphate reductase K08M4_36730 PF13353 4Fe-4S single cluster domain K08M4_36740 PF01554 MatE K08M4_36750 PF02311 AraC-like ligand binding domain K08M4_36750 PF12833 Helix-turn-helix domain K08M4_36760 PF00155 Aminotransferase class I and II K08M4_36770 PF05618 Putative ATP-dependant zinc protease K08M4_36780 PF00005 ABC transporter K08M4_36780 PF12848 ABC transporter K08M4_36800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_36800 PF00672 HAMP domain K08M4_36800 PF02743 Cache domain K08M4_36820 PF04076 Bacterial OB fold (BOF) protein K08M4_36830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K08M4_36830 PF07685 CobB/CobQ-like glutamine amidotransferase domain K08M4_36840 PF13531 Bacterial extracellular solute-binding protein K08M4_36850 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_36860 PF00005 ABC transporter K08M4_36860 PF03459 TOBE domain K08M4_36870 PF11269 Protein of unknown function (DUF3069) K08M4_36880 PF00072 Response regulator receiver domain K08M4_36880 PF00990 GGDEF domain K08M4_36890 PF11557 K08M4_36890 K08M4_36900 PF00990 GGDEF domain K08M4_36910 PF10719 K08M4_36910 K08M4_36920 PF10115 K08M4_36920 K08M4_36930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K08M4_36930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K08M4_36930 PF12769 Domain of unknown function (DUF3814) K08M4_36940 PF02233 NAD(P) transhydrogenase beta subunit K08M4_36950 PF00512 His Kinase A (phospho-acceptor) domain K08M4_36950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_36950 PF11884 Domain of unknown function (DUF3404) K08M4_36960 PF00072 Response regulator receiver domain K08M4_36960 PF00486 Transcriptional regulatory protein, C terminal K08M4_36970 PF11060 K08M4_36970 K08M4_36980 PF13729 K08M4_36980 K08M4_36990 PF03701 K08M4_36990 K08M4_37000 PF00990 GGDEF domain K08M4_37010 PF13175 AAA ATPase domain K08M4_37020 PF13518 Helix-turn-helix domain K08M4_37030 PF01253 Translation initiation factor SUI1 K08M4_37040 PF11782 K08M4_37040 K08M4_37050 PF00589 Phage integrase family K08M4_37060 PF01820 D-ala D-ala ligase N-terminus K08M4_37060 PF07478 D-ala D-ala ligase C-terminus K08M4_37070 PF05036 Sporulation related domain K08M4_37080 PF13302 Acetyltransferase (GNAT) domain K08M4_37080 PF13380 CoA binding domain K08M4_37080 PF13549 ATP-grasp domain K08M4_37080 PF13607 Succinyl-CoA ligase like flavodoxin domain K08M4_37090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_37090 PF03466 LysR substrate binding domain K08M4_37100 PF00593 TonB dependent receptor K08M4_37100 PF07715 TonB-dependent Receptor Plug Domain K08M4_37110 PF16363 K08M4_37110 K08M4_37120 PF03746 LamB/YcsF family K08M4_37130 PF02682 Allophanate hydrolase subunit 1 K08M4_37140 PF02626 Allophanate hydrolase subunit 2 K08M4_37150 PF01266 FAD dependent oxidoreductase K08M4_37160 PF02687 K08M4_37160 K08M4_37170 PF00005 ABC transporter K08M4_37180 PF13472 GDSL-like Lipase/Acylhydrolase family K08M4_37190 PF07055 Enoyl reductase FAD binding domain K08M4_37190 PF12241 Trans-2-enoyl-CoA reductase catalytic region K08M4_37190 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K08M4_37200 PF00563 EAL domain K08M4_37200 PF00990 GGDEF domain K08M4_37200 PF13185 GAF domain K08M4_37210 PF09818 Predicted ATPase of the ABC class K08M4_37220 PF00905 Penicillin binding protein transpeptidase domain K08M4_37220 PF03717 Penicillin-binding Protein dimerisation domain K08M4_37230 PF00226 DnaJ domain K08M4_37230 PF12339 K08M4_37230 K08M4_37240 PF03171 2OG-Fe(II) oxygenase superfamily K08M4_37240 PF14226 non-haem dioxygenase in morphine synthesis N-terminal K08M4_37250 PF09997 K08M4_37250 K08M4_37260 PF00892 EamA-like transporter family K08M4_37270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_37270 PF12793 K08M4_37270 K08M4_37280 PF11869 K08M4_37280 K08M4_37290 PF03061 Thioesterase superfamily K08M4_37300 PF01435 Peptidase family M48 K08M4_37320 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K08M4_37330 PF12262 K08M4_37330 K08M4_37340 PF03831 PhnA protein K08M4_37340 PF08274 PhnA Zinc-Ribbon K08M4_37350 PF01103 Surface antigen K08M4_37360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_37360 PF03466 LysR substrate binding domain K08M4_37380 PF01734 Patatin-like phospholipase K08M4_37390 PF08543 Phosphomethylpyrimidine kinase K08M4_37400 PF00155 Aminotransferase class I and II K08M4_37410 PF02080 TrkA-C domain K08M4_37410 PF06826 K08M4_37410 K08M4_37420 PF13737 K08M4_37420 K08M4_37430 PF13737 K08M4_37430 K08M4_37440 PF07869 K08M4_37440 K08M4_37450 PF16576 K08M4_37450 K08M4_37460 PF04632 K08M4_37460 K08M4_37480 PF00135 Carboxylesterase family K08M4_37490 PF13091 PLD-like domain K08M4_37500 PF01103 Surface antigen K08M4_37500 PF17243 K08M4_37500 K08M4_37510 PF00270 DEAD/DEAH box helicase K08M4_37510 PF00271 Helicase conserved C-terminal domain K08M4_37520 PF06764 Protein of unknown function (DUF1223) K08M4_37540 PF03741 K08M4_37540 K08M4_37560 PF00149 Calcineurin-like phosphoesterase K08M4_37560 PF02872 5'-nucleotidase, C-terminal domain K08M4_37570 PF11398 Protein of unknown function (DUF2813) K08M4_37580 PF06496 K08M4_37580 K08M4_37590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_37590 PF03466 LysR substrate binding domain K08M4_37600 PF00571 CBS domain K08M4_37600 PF01226 Formate/nitrite transporter K08M4_37610 PF04264 YceI-like domain K08M4_37620 PF01292 Prokaryotic cytochrome b561 K08M4_37630 PF09932 K08M4_37630 K08M4_37650 PF00563 EAL domain K08M4_37660 PF00873 AcrB/AcrD/AcrF family K08M4_37670 PF16576 K08M4_37670 K08M4_37690 PF13437 HlyD family secretion protein K08M4_37690 PF13533 Biotin-lipoyl like K08M4_37700 PF00440 Bacterial regulatory proteins, tetR family K08M4_37710 PF00270 DEAD/DEAH box helicase K08M4_37710 PF00271 Helicase conserved C-terminal domain K08M4_37720 PF04336 K08M4_37720 K08M4_37740 PF03222 Tryptophan/tyrosine permease family K08M4_37750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_37760 PF13419 Haloacid dehalogenase-like hydrolase K08M4_37770 PF01966 HD domain K08M4_37790 PF05981 K08M4_37790 K08M4_37800 PF00294 pfkB family carbohydrate kinase K08M4_37810 PF01268 Formate--tetrahydrofolate ligase K08M4_37820 PF00990 GGDEF domain K08M4_37820 PF02743 Cache domain K08M4_37820 PF13426 PAS domain K08M4_37830 PF13419 Haloacid dehalogenase-like hydrolase K08M4_37840 PF00472 RF-1 domain K08M4_37850 PF01381 Helix-turn-helix K08M4_37870 PF00089 Trypsin K08M4_37880 PF01571 Aminomethyltransferase folate-binding domain K08M4_37880 PF08669 Glycine cleavage T-protein C-terminal barrel domain K08M4_37890 PF01381 Helix-turn-helix K08M4_37890 PF07883 Cupin domain K08M4_37900 PF00464 Serine hydroxymethyltransferase K08M4_37910 PF01597 Glycine cleavage H-protein K08M4_37920 PF02347 Glycine cleavage system P-protein K08M4_37950 PF11066 K08M4_37950 K08M4_37960 PF02661 Fic/DOC family K08M4_37980 PF01548 K08M4_37980 K08M4_37980 PF02371 K08M4_37980 K08M4_37990 PF00589 Phage integrase family K08M4_37990 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_38000 PF04986 K08M4_38000 K08M4_38000 PF14319 K08M4_38000 K08M4_38020 PF04986 K08M4_38020 K08M4_38020 PF14319 K08M4_38020 K08M4_38030 PF00589 Phage integrase family K08M4_38030 PF13495 Phage integrase, N-terminal SAM-like domain K08M4_38040 PF01554 MatE K08M4_38050 PF01810 K08M4_38050 K08M4_38080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_38110 PF00291 Pyridoxal-phosphate dependent enzyme K08M4_38120 PF07690 Major Facilitator Superfamily K08M4_38130 PF11884 Domain of unknown function (DUF3404) K08M4_38140 PF00072 Response regulator receiver domain K08M4_38140 PF00486 Transcriptional regulatory protein, C terminal K08M4_38150 PF11060 K08M4_38150 K08M4_38160 PF11308 K08M4_38160 K08M4_38170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_38170 PF03466 LysR substrate binding domain K08M4_38180 PF13533 Biotin-lipoyl like K08M4_38180 PF16576 K08M4_38180 K08M4_38190 PF07690 Major Facilitator Superfamily K08M4_38200 PF00072 Response regulator receiver domain K08M4_38210 PF01627 Hpt domain K08M4_38220 PF00140 Sigma-70 factor, region 1 K08M4_38220 PF04542 Sigma-70 region 2 K08M4_38220 PF04545 Sigma-70, region 4 K08M4_38240 PF13620 Carboxypeptidase regulatory-like domain K08M4_38260 PF13437 HlyD family secretion protein K08M4_38270 PF00072 Response regulator receiver domain K08M4_38280 PF02321 Outer membrane efflux protein K08M4_38290 PF00005 ABC transporter K08M4_38290 PF00664 ABC transporter transmembrane region K08M4_38300 PF00005 ABC transporter K08M4_38300 PF00664 ABC transporter transmembrane region K08M4_38320 PF00072 Response regulator receiver domain K08M4_38320 PF00512 His Kinase A (phospho-acceptor) domain K08M4_38320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_38360 PF04055 Radical SAM superfamily K08M4_38360 PF13186 Iron-sulfur cluster-binding domain K08M4_38370 PF03781 Sulfatase-modifying factor enzyme 1 K08M4_38380 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase K08M4_38390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_38390 PF03466 LysR substrate binding domain K08M4_38400 PF13584 K08M4_38400 K08M4_38410 PF13519 von Willebrand factor type A domain K08M4_38420 PF00092 von Willebrand factor type A domain K08M4_38430 PF14316 K08M4_38430 K08M4_38440 PF01882 K08M4_38440 K08M4_38450 PF07726 ATPase family associated with various cellular activities (AAA) K08M4_38460 PF13424 Tetratricopeptide repeat K08M4_38460 PF13435 Cytochrome c554 and c-prime K08M4_38470 PF00884 Sulfatase K08M4_38470 PF14707 C-terminal region of aryl-sulfatase K08M4_38480 PF00884 Sulfatase K08M4_38490 PF09829 K08M4_38490 K08M4_38500 PF13673 Acetyltransferase (GNAT) domain K08M4_38510 PF02469 Fasciclin domain K08M4_38530 PF10688 K08M4_38530 K08M4_38540 PF02567 Phenazine biosynthesis-like protein K08M4_38550 PF01810 K08M4_38550 K08M4_38560 PF13416 Bacterial extracellular solute-binding protein K08M4_38570 PF00563 EAL domain K08M4_38570 PF00990 GGDEF domain K08M4_38580 PF00990 GGDEF domain K08M4_38600 PF00034 Cytochrome c K08M4_38610 PF00115 Cytochrome C and Quinol oxidase polypeptide I K08M4_38620 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO K08M4_38630 PF00034 Cytochrome c K08M4_38630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K08M4_38630 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K08M4_38640 PF09016 Pas factor saposin fold K08M4_38650 PF00561 alpha/beta hydrolase fold K08M4_38660 PF12525 K08M4_38660 K08M4_38680 PF02028 BCCT family transporter K08M4_38690 PF01244 Membrane dipeptidase (Peptidase family M19) K08M4_38700 PF00171 Aldehyde dehydrogenase family K08M4_38710 PF01042 Endoribonuclease L-PSP K08M4_38720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_38720 PF03466 LysR substrate binding domain K08M4_38730 PF13275 S4 domain K08M4_38740 PF00005 ABC transporter K08M4_38740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_38750 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_38750 PF12911 K08M4_38750 K08M4_38760 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_38770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_38780 PF03372 Endonuclease/Exonuclease/phosphatase family K08M4_38790 PF00486 Transcriptional regulatory protein, C terminal K08M4_38800 PF05025 RbsD / FucU transport protein family K08M4_38810 PF00005 ABC transporter K08M4_38820 PF02653 K08M4_38820 K08M4_38830 PF13407 Periplasmic binding protein domain K08M4_38840 PF00294 pfkB family carbohydrate kinase K08M4_38850 PF00356 Bacterial regulatory proteins, lacI family K08M4_38850 PF13377 Periplasmic binding protein-like domain K08M4_38860 PF07007 Protein of unknown function (DUF1311) K08M4_38870 PF00563 EAL domain K08M4_38870 PF12792 K08M4_38870 K08M4_38910 PF01145 SPFH domain / Band 7 family K08M4_38960 PF00384 Molybdopterin oxidoreductase K08M4_38960 PF01568 Molydopterin dinucleotide binding domain K08M4_38960 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K08M4_38970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K08M4_38970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K08M4_38970 PF04324 BFD-like [2Fe-2S] binding domain K08M4_38970 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_38980 PF13806 Rieske-like [2Fe-2S] domain K08M4_38990 PF07690 Major Facilitator Superfamily K08M4_39000 PF00069 Protein kinase domain K08M4_39000 PF13672 Protein phosphatase 2C K08M4_39010 PF00356 Bacterial regulatory proteins, lacI family K08M4_39010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M4_39020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_39020 PF00381 PTS HPr component phosphorylation site K08M4_39030 PF00294 pfkB family carbohydrate kinase K08M4_39040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_39040 PF02378 Phosphotransferase system, EIIC K08M4_39050 PF08883 Dopa 4,5-dioxygenase family K08M4_39060 PF02798 Glutathione S-transferase, N-terminal domain K08M4_39060 PF13410 Glutathione S-transferase, C-terminal domain K08M4_39070 PF01844 HNH endonuclease K08M4_39090 PF07690 Major Facilitator Superfamily K08M4_39110 PF08774 VRR-NUC domain K08M4_39120 PF06934 K08M4_39120 K08M4_39140 PF00072 Response regulator receiver domain K08M4_39140 PF00512 His Kinase A (phospho-acceptor) domain K08M4_39140 PF01627 Hpt domain K08M4_39140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_39150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K08M4_39160 PF02142 MGS-like domain K08M4_39170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_39180 PF00580 UvrD/REP helicase N-terminal domain K08M4_39180 PF12462 K08M4_39180 K08M4_39180 PF13361 UvrD-like helicase C-terminal domain K08M4_39190 PF12805 K08M4_39190 K08M4_39190 PF13515 K08M4_39190 K08M4_39220 PF00368 Hydroxymethylglutaryl-coenzyme A reductase K08M4_39230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_39230 PF03466 LysR substrate binding domain K08M4_39240 PF04055 Radical SAM superfamily K08M4_39240 PF13353 4Fe-4S single cluster domain K08M4_39250 PF11230 K08M4_39250 K08M4_39260 PF01609 Transposase DDE domain K08M4_39260 PF13006 K08M4_39260 K08M4_39270 PF07690 Major Facilitator Superfamily K08M4_39280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_39280 PF03466 LysR substrate binding domain K08M4_39290 PF00072 Response regulator receiver domain K08M4_39290 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_39290 PF00512 His Kinase A (phospho-acceptor) domain K08M4_39290 PF01627 Hpt domain K08M4_39290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_39300 PF00072 Response regulator receiver domain K08M4_39300 PF01966 HD domain K08M4_39310 PF00005 ABC transporter K08M4_39320 PF01032 FecCD transport family K08M4_39330 PF01032 FecCD transport family K08M4_39340 PF01497 Periplasmic binding protein K08M4_39380 PF11810 K08M4_39380 K08M4_39390 PF07885 Ion channel K08M4_39400 PF01594 K08M4_39400 K08M4_39410 PF11168 K08M4_39410 K08M4_39420 PF16576 K08M4_39420 K08M4_39430 PF12833 Helix-turn-helix domain K08M4_39440 PF00990 GGDEF domain K08M4_39440 PF13426 PAS domain K08M4_39450 PF05232 K08M4_39450 K08M4_39460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_39460 PF03466 LysR substrate binding domain K08M4_39480 PF02581 Thiamine monophosphate synthase/TENI K08M4_39490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_39500 PF02110 Hydroxyethylthiazole kinase family K08M4_39510 PF03070 TENA/THI-4/PQQC family K08M4_39520 PF09084 NMT1/THI5 like K08M4_39530 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_39540 PF00005 ABC transporter K08M4_39550 PF08543 Phosphomethylpyrimidine kinase K08M4_39560 PF00892 EamA-like transporter family K08M4_39570 PF12833 Helix-turn-helix domain K08M4_39580 PF14321 K08M4_39580 K08M4_39590 PF11212 K08M4_39590 K08M4_39600 PF02698 DUF218 domain K08M4_39610 PF00043 Glutathione S-transferase, C-terminal domain K08M4_39610 PF02798 Glutathione S-transferase, N-terminal domain K08M4_39620 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family K08M4_39630 PF00990 GGDEF domain K08M4_39640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) K08M4_39640 PF08388 K08M4_39640 K08M4_39640 PF13655 K08M4_39640 K08M4_39660 PF13358 DDE superfamily endonuclease K08M4_39660 PF13551 Winged helix-turn helix K08M4_39660 PF13592 K08M4_39660 K08M4_39690 PF14534 Domain of unknown function (DUF4440) K08M4_39710 PF07883 Cupin domain K08M4_39720 PF00478 IMP dehydrogenase / GMP reductase domain K08M4_39730 PF09669 K08M4_39730 K08M4_39790 PF12571 K08M4_39790 K08M4_39800 PF09684 K08M4_39800 K08M4_39810 PF04865 K08M4_39810 K08M4_39820 PF10761 K08M4_39820 K08M4_39830 PF10145 K08M4_39830 K08M4_39840 PF10963 K08M4_39840 K08M4_39860 PF11351 K08M4_39860 K08M4_39880 PF01258 Prokaryotic dksA/traR C4-type zinc finger K08M4_39890 PF10772 K08M4_39890 K08M4_39900 PF10758 K08M4_39900 K08M4_39910 PF05069 K08M4_39910 K08M4_39920 PF06891 K08M4_39920 K08M4_39930 PF05926 K08M4_39930 K08M4_39940 PF05944 K08M4_39940 K08M4_39950 PF05125 K08M4_39950 K08M4_39960 PF05929 K08M4_39960 K08M4_39970 PF03237 Terminase-like family K08M4_39970 PF17289 K08M4_39970 K08M4_39980 PF04860 Phage portal protein K08M4_39990 PF10320 Serpentine type 7TM GPCR chemoreceptor Srsx K08M4_40010 PF05840 K08M4_40010 K08M4_40050 PF12961 Domain of Unknown Function with PDB structure (DUF3850) K08M4_40080 PF06892 K08M4_40080 K08M4_40100 PF07022 Bacteriophage CI repressor helix-turn-helix domain K08M4_40100 PF16452 K08M4_40100 K08M4_40110 PF14280 K08M4_40110 K08M4_40120 PF07669 Eco57I restriction-modification methylase K08M4_40130 PF06616 BsuBI/PstI restriction endonuclease C-terminus K08M4_40160 PF00589 Phage integrase family K08M4_40170 PF00478 IMP dehydrogenase / GMP reductase domain K08M4_40180 PF00989 PAS fold K08M4_40190 PF00072 Response regulator receiver domain K08M4_40210 PF01554 MatE K08M4_40220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_40220 PF03466 LysR substrate binding domain K08M4_40230 PF00892 EamA-like transporter family K08M4_40240 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_40250 PF11280 K08M4_40250 K08M4_40260 PF08547 Complex I intermediate-associated protein 30 (CIA30) K08M4_40270 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_40270 PF13602 Zinc-binding dehydrogenase K08M4_40280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_40280 PF03466 LysR substrate binding domain K08M4_40300 PF00005 ABC transporter K08M4_40310 PF01032 FecCD transport family K08M4_40320 PF01032 FecCD transport family K08M4_40330 PF01497 Periplasmic binding protein K08M4_40340 PF00593 TonB dependent receptor K08M4_40340 PF07715 TonB-dependent Receptor Plug Domain K08M4_40350 PF00593 TonB dependent receptor K08M4_40350 PF07715 TonB-dependent Receptor Plug Domain K08M4_40370 PF00871 Acetokinase family K08M4_40380 PF00270 DEAD/DEAH box helicase K08M4_40380 PF00271 Helicase conserved C-terminal domain K08M4_40380 PF03880 DbpA RNA binding domain K08M4_40390 PF00575 S1 RNA binding domain K08M4_40390 PF00773 RNB domain K08M4_40390 PF08206 Ribonuclease B OB domain K08M4_40400 PF12833 Helix-turn-helix domain K08M4_40410 PF11225 K08M4_40410 K08M4_40420 PF12727 PBP superfamily domain K08M4_40430 PF01575 MaoC like domain K08M4_40440 PF00873 AcrB/AcrD/AcrF family K08M4_40450 PF16576 K08M4_40450 K08M4_40460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_40470 PF00924 Mechanosensitive ion channel K08M4_40480 PF10517 K08M4_40480 K08M4_40490 PF01546 Peptidase family M20/M25/M40 K08M4_40490 PF07687 Peptidase dimerisation domain K08M4_40510 PF00248 Aldo/keto reductase family K08M4_40520 PF00588 SpoU rRNA Methylase family K08M4_40530 PF11953 Domain of unknown function (DUF3470) K08M4_40530 PF13187 4Fe-4S dicluster domain K08M4_40560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_40560 PF12793 K08M4_40560 K08M4_40570 PF00270 DEAD/DEAH box helicase K08M4_40570 PF00271 Helicase conserved C-terminal domain K08M4_40580 PF03479 Domain of unknown function (DUF296) K08M4_40590 PF00929 Exonuclease K08M4_40620 PF00270 DEAD/DEAH box helicase K08M4_40620 PF00271 Helicase conserved C-terminal domain K08M4_40620 PF03880 DbpA RNA binding domain K08M4_40630 PF00248 Aldo/keto reductase family K08M4_40650 PF01432 Peptidase family M3 K08M4_40670 PF02631 RecX family K08M4_40680 PF00924 Mechanosensitive ion channel K08M4_40700 PF11412 Disulphide bond corrector protein DsbC K08M4_40700 PF13899 Thioredoxin-like K08M4_40710 PF08534 Redoxin K08M4_40720 PF01966 HD domain K08M4_40730 PF13302 Acetyltransferase (GNAT) domain K08M4_40740 PF00512 His Kinase A (phospho-acceptor) domain K08M4_40740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_40750 PF00072 Response regulator receiver domain K08M4_40750 PF00486 Transcriptional regulatory protein, C terminal K08M4_40770 PF00563 EAL domain K08M4_40770 PF00990 GGDEF domain K08M4_40780 PF00392 Bacterial regulatory proteins, gntR family K08M4_40790 PF00005 ABC transporter K08M4_40810 PF03992 Antibiotic biosynthesis monooxygenase K08M4_40820 PF06042 Bacterial protein of unknown function (DUF925) K08M4_40830 PF16105 K08M4_40830 K08M4_40840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K08M4_40850 PF00293 NUDIX domain K08M4_40860 PF00849 RNA pseudouridylate synthase K08M4_40880 PF12740 Chlorophyllase enzyme K08M4_40890 PF12833 Helix-turn-helix domain K08M4_40900 PF03553 K08M4_40900 K08M4_40920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_40920 PF12793 K08M4_40920 K08M4_40930 PF08443 RimK-like ATP-grasp domain K08M4_40940 PF05618 Putative ATP-dependant zinc protease K08M4_40950 PF00753 Metallo-beta-lactamase superfamily K08M4_40960 PF13640 2OG-Fe(II) oxygenase superfamily K08M4_40970 PF13416 Bacterial extracellular solute-binding protein K08M4_40980 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_40990 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_41000 PF00005 ABC transporter K08M4_41010 PF03009 Glycerophosphoryl diester phosphodiesterase family K08M4_41020 PF01925 K08M4_41020 K08M4_41030 PF03734 L,D-transpeptidase catalytic domain K08M4_41040 PF00583 Acetyltransferase (GNAT) family K08M4_41050 PF01755 K08M4_41050 K08M4_41060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K08M4_41080 PF04399 Glutaredoxin 2, C terminal domain K08M4_41080 PF13417 Glutathione S-transferase, N-terminal domain K08M4_41100 PF00089 Trypsin K08M4_41110 PF03618 K08M4_41110 K08M4_41120 PF00391 PEP-utilising enzyme, mobile domain K08M4_41120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K08M4_41120 PF02896 PEP-utilising enzyme, TIM barrel domain K08M4_41130 PF01554 MatE K08M4_41140 PF08348 K08M4_41140 K08M4_41140 PF13309 K08M4_41140 K08M4_41150 PF01042 Endoribonuclease L-PSP K08M4_41160 PF00375 Sodium:dicarboxylate symporter family K08M4_41170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K08M4_41170 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_41180 PF14279 K08M4_41180 K08M4_41200 PF00589 Phage integrase family K08M4_41200 PF02899 Phage integrase, N-terminal SAM-like domain K08M4_41210 PF13551 Winged helix-turn helix K08M4_41210 PF13592 K08M4_41210 K08M4_41220 PF13358 DDE superfamily endonuclease K08M4_41320 PF11286 K08M4_41320 K08M4_41330 PF04013 Putative SAM-dependent RNA methyltransferase K08M4_41340 PF16576 K08M4_41340 K08M4_41350 PF13641 Glycosyltransferase like family 2 K08M4_41370 PF03773 K08M4_41370 K08M4_41380 PF12840 Helix-turn-helix domain K08M4_41390 PF04542 Sigma-70 region 2 K08M4_41390 PF08281 Sigma-70, region 4 K08M4_41400 PF02588 K08M4_41400 K08M4_41410 PF07690 Major Facilitator Superfamily K08M4_41420 PF01925 K08M4_41420 K08M4_41430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_41430 PF02743 Cache domain K08M4_41440 PF01569 PAP2 superfamily K08M4_41450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K08M4_41460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_41470 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_41480 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_41490 PF00005 ABC transporter K08M4_41510 PF12973 ChrR Cupin-like domain K08M4_41520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_41520 PF03466 LysR substrate binding domain K08M4_41530 PF00106 short chain dehydrogenase K08M4_41540 PF06808 K08M4_41540 K08M4_41550 PF16868 K08M4_41550 K08M4_41560 PF00483 Nucleotidyl transferase K08M4_41570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K08M4_41580 PF08282 haloacid dehalogenase-like hydrolase K08M4_41590 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_41600 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_41610 PF00005 ABC transporter K08M4_41620 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein K08M4_41640 PF03009 Glycerophosphoryl diester phosphodiesterase family K08M4_41650 PF00072 Response regulator receiver domain K08M4_41650 PF00158 Sigma-54 interaction domain K08M4_41650 PF02954 Bacterial regulatory protein, Fis family K08M4_41660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_41670 PF06445 GyrI-like small molecule binding domain K08M4_41670 PF12833 Helix-turn-helix domain K08M4_41690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K08M4_41690 PF13378 Enolase C-terminal domain-like K08M4_41700 PF07755 Protein of unknown function (DUF1611) K08M4_41700 PF17396 K08M4_41700 K08M4_41710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_41710 PF03466 LysR substrate binding domain K08M4_41720 PF13472 GDSL-like Lipase/Acylhydrolase family K08M4_41730 PF00128 Alpha amylase, catalytic domain K08M4_41740 PF00588 SpoU rRNA Methylase family K08M4_41750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_41750 PF17200 K08M4_41750 K08M4_41760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_41760 PF03466 LysR substrate binding domain K08M4_41770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_41770 PF00672 HAMP domain K08M4_41780 PF11215 K08M4_41780 K08M4_41790 PF00892 EamA-like transporter family K08M4_41800 PF00155 Aminotransferase class I and II K08M4_41800 PF00392 Bacterial regulatory proteins, gntR family K08M4_41810 PF03222 Tryptophan/tyrosine permease family K08M4_41820 PF01047 MarR family K08M4_41830 PF02566 OsmC-like protein K08M4_41840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_41840 PF08376 Nitrate and nitrite sensing K08M4_41860 PF00440 Bacterial regulatory proteins, tetR family K08M4_41870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_41870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_41870 PF02378 Phosphotransferase system, EIIC K08M4_41880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_41890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_41890 PF00381 PTS HPr component phosphorylation site K08M4_41900 PF12833 Helix-turn-helix domain K08M4_41910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_41910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_41910 PF02378 Phosphotransferase system, EIIC K08M4_41920 PF01238 Phosphomannose isomerase type I K08M4_41930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K08M4_41940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K08M4_41950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K08M4_41960 PF00246 Zinc carboxypeptidase K08M4_41980 PF00912 Transglycosylase K08M4_41990 PF00107 Zinc-binding dehydrogenase K08M4_41990 PF08240 Alcohol dehydrogenase GroES-like domain K08M4_42000 PF00756 Putative esterase K08M4_42020 PF00293 NUDIX domain K08M4_42030 PF00171 Aldehyde dehydrogenase family K08M4_42040 PF00158 Sigma-54 interaction domain K08M4_42040 PF01590 GAF domain K08M4_42040 PF02954 Bacterial regulatory protein, Fis family K08M4_42050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K08M4_42060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_42060 PF03466 LysR substrate binding domain K08M4_42070 PF13417 Glutathione S-transferase, N-terminal domain K08M4_42070 PF14834 Glutathione S-transferase, C-terminal domain K08M4_42100 PF01794 K08M4_42100 K08M4_42100 PF08022 K08M4_42100 K08M4_42110 PF01613 Flavin reductase like domain K08M4_42130 PF13642 protein structure with unknown function K08M4_42140 PF03605 K08M4_42140 K08M4_42150 PF13419 Haloacid dehalogenase-like hydrolase K08M4_42160 PF01966 HD domain K08M4_42170 PF00583 Acetyltransferase (GNAT) family K08M4_42180 PF03352 Methyladenine glycosylase K08M4_42190 PF03547 K08M4_42190 K08M4_42250 PF01047 MarR family K08M4_42260 PF00892 EamA-like transporter family K08M4_42270 PF00892 EamA-like transporter family K08M4_42280 PF07690 Major Facilitator Superfamily K08M4_42290 PF02958 Ecdysteroid kinase K08M4_42300 PF14542 GCN5-related N-acetyl-transferase K08M4_42310 PF07238 PilZ domain K08M4_42310 PF12945 Flagellar protein YcgR K08M4_42320 PF05362 Lon protease (S16) C-terminal proteolytic domain K08M4_42320 PF13654 AAA domain K08M4_42340 PF00005 ABC transporter K08M4_42340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_42370 PF00356 Bacterial regulatory proteins, lacI family K08M4_42370 PF13377 Periplasmic binding protein-like domain K08M4_42380 PF04685 Protein of unknown function, DUF608 K08M4_42380 PF12215 K08M4_42380 K08M4_42390 PF01263 Aldose 1-epimerase K08M4_42400 PF06165 Glycosyltransferase family 36 K08M4_42400 PF17167 K08M4_42400 K08M4_42410 PF00005 ABC transporter K08M4_42420 PF00232 Glycosyl hydrolase family 1 K08M4_42430 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_42440 PF00528 Binding-protein-dependent transport system inner membrane component K08M4_42450 PF13416 Bacterial extracellular solute-binding protein K08M4_42460 PF00356 Bacterial regulatory proteins, lacI family K08M4_42460 PF13377 Periplasmic binding protein-like domain K08M4_42470 PF02264 LamB porin K08M4_42480 PF00326 Prolyl oligopeptidase family K08M4_42480 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K08M4_42490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_42490 PF03466 LysR substrate binding domain K08M4_42500 PF02652 K08M4_42500 K08M4_42510 PF01070 FMN-dependent dehydrogenase K08M4_42520 PF01565 FAD binding domain K08M4_42520 PF02754 K08M4_42520 K08M4_42520 PF02913 FAD linked oxidases, C-terminal domain K08M4_42520 PF13183 4Fe-4S dicluster domain K08M4_42540 PF06445 GyrI-like small molecule binding domain K08M4_42540 PF12833 Helix-turn-helix domain K08M4_42550 PF00155 Aminotransferase class I and II K08M4_42560 PF00581 Rhodanese-like domain K08M4_42570 PF04325 Protein of unknown function (DUF465) K08M4_42580 PF13673 Acetyltransferase (GNAT) domain K08M4_42590 PF01238 Phosphomannose isomerase type I K08M4_42600 PF07690 Major Facilitator Superfamily K08M4_42610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_42610 PF05231 K08M4_42610 K08M4_42610 PF07730 Histidine kinase K08M4_42620 PF00072 Response regulator receiver domain K08M4_42620 PF00196 Bacterial regulatory proteins, luxR family K08M4_42630 PF07690 Major Facilitator Superfamily K08M4_42640 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase K08M4_42650 PF08895 K08M4_42650 K08M4_42660 PF00990 GGDEF domain K08M4_42680 PF02678 Pirin K08M4_42680 PF05726 Pirin C-terminal cupin domain K08M4_42690 PF06865 Protein of unknown function (DUF1255) K08M4_42700 PF11012 K08M4_42700 K08M4_42710 PF00704 Glycosyl hydrolases family 18 K08M4_42710 PF08329 Chitinase A, N-terminal domain K08M4_42720 PF12146 Putative lysophospholipase K08M4_42730 PF00440 Bacterial regulatory proteins, tetR family K08M4_42740 PF03547 K08M4_42740 K08M4_42750 PF01757 K08M4_42750 K08M4_42760 PF12833 Helix-turn-helix domain K08M4_42760 PF12852 Cupin K08M4_42780 PF01852 START domain K08M4_42800 PF01124 MAPEG family K08M4_42810 PF07670 Nucleoside recognition K08M4_42820 PF07670 Nucleoside recognition K08M4_42830 PF03600 Citrate transporter K08M4_42850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K08M4_42850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K08M4_42860 PF02805 Metal binding domain of Ada K08M4_42860 PF06029 AlkA N-terminal domain K08M4_42860 PF12833 Helix-turn-helix domain K08M4_42880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_42880 PF03466 LysR substrate binding domain K08M4_42890 PF04219 K08M4_42890 K08M4_42900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K08M4_42930 PF00881 Nitroreductase family K08M4_42940 PF00258 Flavodoxin K08M4_42940 PF00301 Rubredoxin K08M4_42940 PF00753 Metallo-beta-lactamase superfamily K08M4_42950 PF07992 Pyridine nucleotide-disulphide oxidoreductase K08M4_42960 PF03616 K08M4_42960 K08M4_42970 PF10928 Protein of unknown function (DUF2810) K08M4_42980 PF01757 K08M4_42980 K08M4_42990 PF04932 K08M4_42990 K08M4_43010 PF04542 Sigma-70 region 2 K08M4_43010 PF08281 Sigma-70, region 4 K08M4_43020 PF12973 ChrR Cupin-like domain K08M4_43030 PF04463 K08M4_43030 K08M4_43030 PF08349 K08M4_43030 K08M4_43040 PF00875 DNA photolyase K08M4_43040 PF03441 FAD binding domain of DNA photolyase K08M4_43050 PF12680 SnoaL-like domain K08M4_43060 PF00106 short chain dehydrogenase K08M4_43070 PF01593 Flavin containing amine oxidoreductase K08M4_43080 PF07103 K08M4_43080 K08M4_43090 PF02353 Mycolic acid cyclopropane synthetase K08M4_43100 PF11086 K08M4_43100 K08M4_43110 PF16036 K08M4_43110 K08M4_43120 PF12915 K08M4_43120 K08M4_43140 PF00076 RNA recognition motif K08M4_43150 PF12614 K08M4_43150 K08M4_43160 PF02566 OsmC-like protein K08M4_43170 PF04828 Glutathione-dependent formaldehyde-activating enzyme K08M4_43180 PF00367 phosphotransferase system, EIIB K08M4_43180 PF02378 Phosphotransferase system, EIIC K08M4_43200 PF00512 His Kinase A (phospho-acceptor) domain K08M4_43200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_43210 PF00072 Response regulator receiver domain K08M4_43210 PF00486 Transcriptional regulatory protein, C terminal K08M4_43220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_43220 PF03466 LysR substrate binding domain K08M4_43230 PF13561 Enoyl-(Acyl carrier protein) reductase K08M4_43240 PF07690 Major Facilitator Superfamily K08M4_43250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K08M4_43260 PF01844 HNH endonuclease K08M4_43270 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ K08M4_43280 PF02355 Protein export membrane protein K08M4_43280 PF07549 SecD/SecF GG Motif K08M4_43290 PF02355 Protein export membrane protein K08M4_43290 PF07549 SecD/SecF GG Motif K08M4_43290 PF13721 SecD export protein N-terminal TM region K08M4_43310 PF00675 Insulinase (Peptidase family M16) K08M4_43310 PF05193 Peptidase M16 inactive domain K08M4_43320 PF00675 Insulinase (Peptidase family M16) K08M4_43320 PF05193 Peptidase M16 inactive domain K08M4_43330 PF00072 Response regulator receiver domain K08M4_43330 PF04397 LytTr DNA-binding domain K08M4_43340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_43340 PF06580 K08M4_43340 K08M4_43360 PF17131 K08M4_43360 K08M4_43370 PF02687 K08M4_43370 K08M4_43370 PF12704 MacB-like periplasmic core domain K08M4_43380 PF00005 ABC transporter K08M4_43400 PF13302 Acetyltransferase (GNAT) domain K08M4_43410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K08M4_43410 PF03466 LysR substrate binding domain K08M4_43430 PF00144 Beta-lactamase K08M4_43440 PF11736 Protein of unknown function (DUF3299) K08M4_43450 PF01546 Peptidase family M20/M25/M40 K08M4_43450 PF07687 Peptidase dimerisation domain K08M4_43460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K08M4_43460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08M4_43470 PF01709 Transcriptional regulator K08M4_43480 PF11686 K08M4_43480 K08M4_43490 PF01329 Pterin 4 alpha carbinolamine dehydratase K08M4_43500 PF00351 Biopterin-dependent aromatic amino acid hydroxylase K08M4_43510 PF00501 AMP-binding enzyme K08M4_43520 PF00696 Amino acid kinase family K08M4_43530 PF13417 Glutathione S-transferase, N-terminal domain K08M4_43540 PF01557 Fumarylacetoacetate (FAA) hydrolase family K08M4_43550 PF04209 homogentisate 1,2-dioxygenase K08M4_43560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08M4_43560 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K08M4_43580 PF12710 haloacid dehalogenase-like hydrolase K08M4_43590 PF00072 Response regulator receiver domain K08M4_43590 PF00512 His Kinase A (phospho-acceptor) domain K08M4_43590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K08M4_43590 PF17149 K08M4_43590 K08M4_43600 PF00497 Bacterial extracellular solute-binding proteins, family 3 K08M4_43610 PF08719 Domain of unknown function (DUF1768) K08M4_43630 PF00005 ABC transporter K08M4_43640 PF00005 ABC transporter K08M4_43640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K08M4_43660 PF00561 alpha/beta hydrolase fold K08M4_43670 PF11826 K08M4_43670