locus-tag class description VagVIO5_00010 PF11638 DnaA N-terminal domain VagVIO5_00010 PF08299 Bacterial dnaA protein helix-turn-helix VagVIO5_00010 PF00308 Bacterial dnaA protein VagVIO5_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain VagVIO5_00020 PF02767 DNA polymerase III beta subunit, central domain VagVIO5_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain VagVIO5_00030 PF02463 RecF/RecN/SMC N terminal domain VagVIO5_00040 PF00986 DNA gyrase B subunit, carboxyl terminus VagVIO5_00040 PF01751 Toprim domain VagVIO5_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_00040 PF18053 DNA gyrase B subunit insert domain VagVIO5_00040 PF00204 DNA gyrase B VagVIO5_00070 PF00011 Hsp20/alpha crystallin family VagVIO5_00080 PF00155 Aminotransferase class I and II VagVIO5_00090 PF00128 Alpha amylase, catalytic domain VagVIO5_00100 PF05746 DALR anticodon binding domain VagVIO5_00100 PF02092 Glycyl-tRNA synthetase beta subunit VagVIO5_00110 PF02091 Glycyl-tRNA synthetase alpha subunit VagVIO5_00120 PF01169 Uncharacterized protein family UPF0016 VagVIO5_00140 PF01206 Sulfurtransferase TusA VagVIO5_00160 PF03466 LysR substrate binding domain VagVIO5_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_00170 PF08240 Alcohol dehydrogenase GroES-like domain VagVIO5_00170 PF00107 Zinc-binding dehydrogenase VagVIO5_00180 PF00108 Thiolase, N-terminal domain VagVIO5_00180 PF02803 Thiolase, C-terminal domain VagVIO5_00190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VagVIO5_00190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VagVIO5_00190 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_00200 PF01205 Uncharacterized protein family UPF0029 VagVIO5_00200 PF09186 Domain of unknown function (DUF1949) VagVIO5_00210 PF02386 Cation transport protein VagVIO5_00220 PF12724 Flavodoxin domain VagVIO5_00230 PF03466 LysR substrate binding domain VagVIO5_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_00240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VagVIO5_00240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VagVIO5_00250 PF04380 Membrane fusogenic activity VagVIO5_00260 PF00873 AcrB/AcrD/AcrF family VagVIO5_00270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_00280 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_00280 PF16295 Tetracyclin repressor-like, C-terminal domain VagVIO5_00290 PF00580 UvrD/REP helicase N-terminal domain VagVIO5_00290 PF13361 UvrD-like helicase C-terminal domain VagVIO5_00300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VagVIO5_00320 PF00005 ABC transporter VagVIO5_00320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_00330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_00350 PF12911 N-terminal TM domain of oligopeptide transport permease C VagVIO5_00350 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_00420 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_00420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VagVIO5_00430 PF03466 LysR substrate binding domain VagVIO5_00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_00440 PF00893 Small Multidrug Resistance protein VagVIO5_00450 PF00893 Small Multidrug Resistance protein VagVIO5_00460 PF00920 Dehydratase family VagVIO5_00470 PF01202 Shikimate kinase VagVIO5_00480 PF02447 GntP family permease VagVIO5_00490 PF01081 KDPG and KHG aldolase VagVIO5_00500 PF01048 Phosphorylase superfamily VagVIO5_00510 PF03466 LysR substrate binding domain VagVIO5_00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_00520 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_00520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VagVIO5_00530 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VagVIO5_00540 PF01432 Peptidase family M3 VagVIO5_00550 PF01037 Lrp/AsnC ligand binding domain VagVIO5_00560 PF08448 PAS fold VagVIO5_00560 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_00560 PF00563 EAL domain VagVIO5_00570 PF04445 Putative SAM-dependent methyltransferase VagVIO5_00590 PF00892 EamA-like transporter family VagVIO5_00600 PF00582 Universal stress protein family VagVIO5_00610 PF00210 Ferritin-like domain VagVIO5_00620 PF10625 Universal stress protein B (UspB) VagVIO5_00640 PF02954 Bacterial regulatory protein, Fis family VagVIO5_00640 PF00072 Response regulator receiver domain VagVIO5_00640 PF00158 Sigma-54 interaction domain VagVIO5_00690 PF00781 Diacylglycerol kinase catalytic domain VagVIO5_00750 PF01594 AI-2E family transporter VagVIO5_00760 PF00563 EAL domain VagVIO5_00760 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_00760 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_00780 PF02646 RmuC family VagVIO5_00790 PF01209 ubiE/COQ5 methyltransferase family VagVIO5_00800 PF02036 SCP-2 sterol transfer family VagVIO5_00810 PF03109 ABC1 family VagVIO5_00820 PF02416 mttA/Hcf106 family VagVIO5_00830 PF02416 mttA/Hcf106 family VagVIO5_00840 PF00902 Sec-independent protein translocase protein (TatC) VagVIO5_00850 PF01026 TatD related DNase VagVIO5_00860 PF00490 Delta-aminolevulinic acid dehydratase VagVIO5_00870 PF00583 Acetyltransferase (GNAT) family VagVIO5_00880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VagVIO5_00880 PF00476 DNA polymerase family A VagVIO5_00880 PF01367 5'-3' exonuclease, C-terminal SAM fold VagVIO5_00880 PF01612 3'-5' exonuclease VagVIO5_00890 PF01926 50S ribosome-binding GTPase VagVIO5_00900 PF00034 Cytochrome c VagVIO5_00920 PF04220 Der GTPase activator (YihI) VagVIO5_00930 PF10675 Protein of unknown function (DUF2489) VagVIO5_00940 PF06969 HemN C-terminal domain VagVIO5_00940 PF04055 Radical SAM superfamily VagVIO5_00950 PF00962 Adenosine/AMP deaminase VagVIO5_00960 PF00563 EAL domain VagVIO5_00960 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_00960 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_00970 PF00158 Sigma-54 interaction domain VagVIO5_00970 PF00072 Response regulator receiver domain VagVIO5_00970 PF02954 Bacterial regulatory protein, Fis family VagVIO5_00980 PF00989 PAS fold VagVIO5_00980 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_01000 PF00120 Glutamine synthetase, catalytic domain VagVIO5_01000 PF03951 Glutamine synthetase, beta-Grasp domain VagVIO5_01040 PF03631 Virulence factor BrkB VagVIO5_01050 PF02580 D-Tyr-tRNA(Tyr) deacylase VagVIO5_01060 PF09500 Putative thioesterase (yiiD_Cterm) VagVIO5_01060 PF00583 Acetyltransferase (GNAT) family VagVIO5_01080 PF01293 Phosphoenolpyruvate carboxykinase VagVIO5_01090 PF01430 Hsp33 protein VagVIO5_01100 PF01479 S4 domain VagVIO5_01110 PF11356 Type II secretion system protein C VagVIO5_01120 PF00263 Bacterial type II and III secretion system protein VagVIO5_01120 PF03958 Bacterial type II/III secretion system short domain VagVIO5_01130 PF00437 Type II/IV secretion system protein VagVIO5_01140 PF00482 Type II secretion system (T2SS), protein F VagVIO5_01150 PF07963 Prokaryotic N-terminal methylation motif VagVIO5_01150 PF08334 Type II secretion system (T2SS), protein G VagVIO5_01160 PF12019 Type II transport protein GspH VagVIO5_01170 PF07963 Prokaryotic N-terminal methylation motif VagVIO5_01170 PF02501 Type II secretion system (T2SS), protein I VagVIO5_01180 PF11612 Type II secretion system (T2SS), protein J VagVIO5_01180 PF07963 Prokaryotic N-terminal methylation motif VagVIO5_01190 PF03934 Type II secretion system (T2SS), protein K VagVIO5_01200 PF05134 Type II secretion system (T2SS), protein L VagVIO5_01200 PF12693 GspL periplasmic domain VagVIO5_01210 PF04612 Type II secretion system (T2SS), protein M VagVIO5_01220 PF01203 Type II secretion system (T2SS), protein N VagVIO5_01230 PF00459 Inositol monophosphatase family VagVIO5_01240 PF00293 NUDIX domain VagVIO5_01250 PF01521 Iron-sulphur cluster biosynthesis VagVIO5_01250 PF01106 NifU-like domain VagVIO5_01260 PF00156 Phosphoribosyl transferase domain VagVIO5_01270 PF00561 alpha/beta hydrolase fold VagVIO5_01290 PF00575 S1 RNA binding domain VagVIO5_01290 PF09371 Tex-like protein N-terminal domain VagVIO5_01290 PF16921 Tex protein YqgF-like domain VagVIO5_01290 PF17674 HHH domain VagVIO5_01310 PF01272 Transcription elongation factor, GreA/GreB, C-term VagVIO5_01310 PF03449 Transcription elongation factor, N-terminal VagVIO5_01330 PF00072 Response regulator receiver domain VagVIO5_01330 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_01340 PF00672 HAMP domain VagVIO5_01340 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_01350 PF00860 Permease family VagVIO5_01360 PF00271 Helicase conserved C-terminal domain VagVIO5_01360 PF17191 RecG wedge domain VagVIO5_01360 PF00270 DEAD/DEAH box helicase VagVIO5_01370 PF12105 SpoU, rRNA methylase, C-terminal VagVIO5_01370 PF00588 SpoU rRNA Methylase family VagVIO5_01380 PF02824 TGS domain VagVIO5_01380 PF04607 Region found in RelA / SpoT proteins VagVIO5_01380 PF13291 ACT domain VagVIO5_01390 PF01192 RNA polymerase Rpb6 VagVIO5_01400 PF00625 Guanylate kinase VagVIO5_01430 PF02472 Biopolymer transport protein ExbD/TolR VagVIO5_01440 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_01470 PF00593 TonB dependent receptor VagVIO5_01470 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_01480 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_01490 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_01490 PF12911 N-terminal TM domain of oligopeptide transport permease C VagVIO5_01500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_01510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_01510 PF00005 ABC transporter VagVIO5_01520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_01520 PF00005 ABC transporter VagVIO5_01540 PF08340 Domain of unknown function (DUF1732) VagVIO5_01540 PF03755 YicC-like family, N-terminal region VagVIO5_01550 PF01138 3' exoribonuclease family, domain 1 VagVIO5_01550 PF03725 3' exoribonuclease family, domain 2 VagVIO5_01570 PF03279 Bacterial lipid A biosynthesis acyltransferase VagVIO5_01580 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_01590 PF02441 Flavoprotein VagVIO5_01590 PF04127 DNA / pantothenate metabolism flavoprotein VagVIO5_01600 PF17200 Single Cache domain 2 VagVIO5_01600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_01600 PF00672 HAMP domain VagVIO5_01610 PF04002 RadC-like JAB domain VagVIO5_01620 PF00830 Ribosomal L28 family VagVIO5_01630 PF00471 Ribosomal protein L33 VagVIO5_01650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VagVIO5_01650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VagVIO5_01650 PF06827 Zinc finger found in FPG and IleRS VagVIO5_01670 PF05686 Glycosyl transferase family 90 VagVIO5_01680 PF01467 Cytidylyltransferase-like VagVIO5_01690 PF00535 Glycosyl transferase family 2 VagVIO5_01700 PF00535 Glycosyl transferase family 2 VagVIO5_01710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VagVIO5_01720 PF01219 Prokaryotic diacylglycerol kinase VagVIO5_01740 PF16363 GDP-mannose 4,6 dehydratase VagVIO5_01750 PF00483 Nucleotidyl transferase VagVIO5_01770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VagVIO5_01790 PF02719 Polysaccharide biosynthesis protein VagVIO5_01800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VagVIO5_01810 PF02350 UDP-N-acetylglucosamine 2-epimerase VagVIO5_01820 PF03102 NeuB family VagVIO5_01820 PF08666 SAF domain VagVIO5_01840 PF00483 Nucleotidyl transferase VagVIO5_01850 PF02348 Cytidylyltransferase VagVIO5_01860 PF07922 Glycosyltransferase family 52 VagVIO5_01870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VagVIO5_01880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VagVIO5_01890 PF03279 Bacterial lipid A biosynthesis acyltransferase VagVIO5_01900 PF01370 NAD dependent epimerase/dehydratase family VagVIO5_01910 PF06082 Exopolysaccharide biosynthesis protein YbjH VagVIO5_01930 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VagVIO5_01960 PF10531 SLBB domain VagVIO5_01960 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VagVIO5_01960 PF02563 Polysaccharide biosynthesis/export protein VagVIO5_02030 PF02719 Polysaccharide biosynthesis protein VagVIO5_02030 PF08485 Polysaccharide biosynthesis protein C-terminal VagVIO5_02040 PF04321 RmlD substrate binding domain VagVIO5_02050 PF02350 UDP-N-acetylglucosamine 2-epimerase VagVIO5_02070 PF00953 Glycosyl transferase family 4 VagVIO5_02080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VagVIO5_02080 PF10996 Beta-Casp domain VagVIO5_02080 PF00753 Metallo-beta-lactamase superfamily VagVIO5_02090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VagVIO5_02090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VagVIO5_02090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VagVIO5_02110 PF01370 NAD dependent epimerase/dehydratase family VagVIO5_02140 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_02170 PF00534 Glycosyl transferases group 1 VagVIO5_02170 PF13477 Glycosyl transferase 4-like VagVIO5_02180 PF02397 Bacterial sugar transferase VagVIO5_02200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VagVIO5_02210 PF02719 Polysaccharide biosynthesis protein VagVIO5_02230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VagVIO5_02230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VagVIO5_02230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VagVIO5_02240 PF00121 Triosephosphate isomerase VagVIO5_02280 PF08220 DeoR-like helix-turn-helix domain VagVIO5_02280 PF00455 DeoR C terminal sensor domain VagVIO5_02290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VagVIO5_02300 PF06005 Cell division protein ZapB VagVIO5_02310 PF03737 Aldolase/RraA VagVIO5_02320 PF01040 UbiA prenyltransferase family VagVIO5_02330 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_02330 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_02340 PF00227 Proteasome subunit VagVIO5_02370 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_02380 PF18074 Primosomal protein N C-terminal domain VagVIO5_02380 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VagVIO5_02380 PF17764 3′ DNA-binding domain (3′BD) VagVIO5_02380 PF00271 Helicase conserved C-terminal domain VagVIO5_02380 PF00270 DEAD/DEAH box helicase VagVIO5_02390 PF01197 Ribosomal protein L31 VagVIO5_02400 PF00338 Ribosomal protein S10p/S20e VagVIO5_02410 PF00297 Ribosomal protein L3 VagVIO5_02420 PF00573 Ribosomal protein L4/L1 family VagVIO5_02430 PF00276 Ribosomal protein L23 VagVIO5_02440 PF03947 Ribosomal Proteins L2, C-terminal domain VagVIO5_02440 PF00181 Ribosomal Proteins L2, RNA binding domain VagVIO5_02450 PF00203 Ribosomal protein S19 VagVIO5_02460 PF00237 Ribosomal protein L22p/L17e VagVIO5_02470 PF07650 KH domain VagVIO5_02470 PF00189 Ribosomal protein S3, C-terminal domain VagVIO5_02480 PF00252 Ribosomal protein L16p/L10e VagVIO5_02490 PF00831 Ribosomal L29 protein VagVIO5_02500 PF00366 Ribosomal protein S17 VagVIO5_02510 PF00238 Ribosomal protein L14p/L23e VagVIO5_02520 PF00467 KOW motif VagVIO5_02520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VagVIO5_02530 PF00281 Ribosomal protein L5 VagVIO5_02530 PF00673 ribosomal L5P family C-terminus VagVIO5_02540 PF00253 Ribosomal protein S14p/S29e VagVIO5_02550 PF00410 Ribosomal protein S8 VagVIO5_02560 PF00347 Ribosomal protein L6 VagVIO5_02570 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VagVIO5_02580 PF03719 Ribosomal protein S5, C-terminal domain VagVIO5_02580 PF00333 Ribosomal protein S5, N-terminal domain VagVIO5_02590 PF00327 Ribosomal protein L30p/L7e VagVIO5_02610 PF00344 SecY translocase VagVIO5_02620 PF00444 Ribosomal protein L36 VagVIO5_02630 PF00416 Ribosomal protein S13/S18 VagVIO5_02640 PF00411 Ribosomal protein S11 VagVIO5_02650 PF01479 S4 domain VagVIO5_02650 PF00163 Ribosomal protein S4/S9 N-terminal domain VagVIO5_02660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VagVIO5_02660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VagVIO5_02660 PF01000 RNA polymerase Rpb3/RpoA insert domain VagVIO5_02670 PF01196 Ribosomal protein L17 VagVIO5_02690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VagVIO5_02690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VagVIO5_02710 PF13673 Acetyltransferase (GNAT) domain VagVIO5_02720 PF03880 DbpA RNA binding domain VagVIO5_02720 PF00270 DEAD/DEAH box helicase VagVIO5_02720 PF00271 Helicase conserved C-terminal domain VagVIO5_02740 PF00149 Calcineurin-like phosphoesterase VagVIO5_02740 PF02872 5'-nucleotidase, C-terminal domain VagVIO5_02750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VagVIO5_02750 PF14824 Sirohaem biosynthesis protein central VagVIO5_02750 PF10414 Sirohaem synthase dimerisation region VagVIO5_02760 PF01507 Phosphoadenosine phosphosulfate reductase family VagVIO5_02770 PF00009 Elongation factor Tu GTP binding domain VagVIO5_02780 PF03600 Citrate transporter VagVIO5_02780 PF02080 TrkA-C domain VagVIO5_02840 PF00005 ABC transporter VagVIO5_02860 PF10795 Protein of unknown function (DUF2607) VagVIO5_02870 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VagVIO5_02880 PF06526 Protein of unknown function (DUF1107) VagVIO5_02890 PF01625 Peptide methionine sulfoxide reductase VagVIO5_02900 PF01103 Surface antigen VagVIO5_02900 PF17243 POTRA domain TamA domain 1 VagVIO5_02910 PF04357 TamB, inner membrane protein subunit of TAM complex VagVIO5_02920 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VagVIO5_02940 PF00719 Inorganic pyrophosphatase VagVIO5_02950 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VagVIO5_02960 PF01225 Mur ligase family, catalytic domain VagVIO5_02960 PF02875 Mur ligase family, glutamate ligase domain VagVIO5_02960 PF08245 Mur ligase middle domain VagVIO5_02970 PF02441 Flavoprotein VagVIO5_02990 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_03000 PF00005 ABC transporter VagVIO5_03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_03010 PF03466 LysR substrate binding domain VagVIO5_03020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VagVIO5_03050 PF16868 NMT1-like family VagVIO5_03060 PF02863 Arginine repressor, C-terminal domain VagVIO5_03060 PF01316 Arginine repressor, DNA binding domain VagVIO5_03070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VagVIO5_03070 PF00056 lactate/malate dehydrogenase, NAD binding domain VagVIO5_03090 PF00348 Polyprenyl synthetase VagVIO5_03100 PF00829 Ribosomal prokaryotic L21 protein VagVIO5_03110 PF01016 Ribosomal L27 protein VagVIO5_03120 PF01926 50S ribosome-binding GTPase VagVIO5_03120 PF01018 GTP1/OBG VagVIO5_03130 PF06738 Putative threonine/serine exporter VagVIO5_03140 PF12821 Threonine/Serine exporter, ThrE VagVIO5_03150 PF00186 Dihydrofolate reductase VagVIO5_03160 PF00149 Calcineurin-like phosphoesterase VagVIO5_03170 PF04379 ApaG domain VagVIO5_03180 PF00398 Ribosomal RNA adenine dimethylase VagVIO5_03190 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VagVIO5_03200 PF09312 SurA N-terminal domain VagVIO5_03210 PF04453 LPS transport system D VagVIO5_03210 PF03968 OstA-like protein VagVIO5_03220 PF00226 DnaJ domain VagVIO5_03220 PF05099 Tellurite resistance protein TerB VagVIO5_03240 PF00694 Aconitase C-terminal domain VagVIO5_03250 PF00330 Aconitase family (aconitate hydratase) VagVIO5_03260 PF00180 Isocitrate/isopropylmalate dehydrogenase VagVIO5_03270 PF08502 LeuA allosteric (dimerisation) domain VagVIO5_03270 PF00682 HMGL-like VagVIO5_03290 PF01569 PAP2 superfamily VagVIO5_03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_03310 PF03466 LysR substrate binding domain VagVIO5_03320 PF00501 AMP-binding enzyme VagVIO5_03330 PF00205 Thiamine pyrophosphate enzyme, central domain VagVIO5_03330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VagVIO5_03330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VagVIO5_03340 PF10369 Small subunit of acetolactate synthase VagVIO5_03350 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_03350 PF07694 5TMR of 5TMR-LYT VagVIO5_03370 PF00224 Pyruvate kinase, barrel domain VagVIO5_03370 PF02887 Pyruvate kinase, alpha/beta domain VagVIO5_03380 PF00455 DeoR C terminal sensor domain VagVIO5_03380 PF08220 DeoR-like helix-turn-helix domain VagVIO5_03390 PF01380 SIS domain VagVIO5_03410 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_03410 PF00072 Response regulator receiver domain VagVIO5_03420 PF00672 HAMP domain VagVIO5_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_03420 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_03430 PF00465 Iron-containing alcohol dehydrogenase VagVIO5_03440 PF02733 Dak1 domain VagVIO5_03450 PF02734 DAK2 domain VagVIO5_03460 PF00391 PEP-utilising enzyme, mobile domain VagVIO5_03460 PF05524 PEP-utilising enzyme, N-terminal VagVIO5_03460 PF02896 PEP-utilising enzyme, TIM barrel domain VagVIO5_03470 PF00989 PAS fold VagVIO5_03470 PF00158 Sigma-54 interaction domain VagVIO5_03470 PF02954 Bacterial regulatory protein, Fis family VagVIO5_03480 PF05068 Mannitol repressor VagVIO5_03490 PF08125 Mannitol dehydrogenase C-terminal domain VagVIO5_03490 PF01232 Mannitol dehydrogenase Rossmann domain VagVIO5_03500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VagVIO5_03500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VagVIO5_03500 PF02378 Phosphotransferase system, EIIC VagVIO5_03560 PF03180 NLPA lipoprotein VagVIO5_03570 PF04539 Sigma-70 region 3 VagVIO5_03570 PF04542 Sigma-70 region 2 VagVIO5_03570 PF00140 Sigma-70 factor, region 1.2 VagVIO5_03570 PF03979 Sigma-70 factor, region 1.1 VagVIO5_03570 PF04545 Sigma-70, region 4 VagVIO5_03570 PF04546 Sigma-70, non-essential region VagVIO5_03580 PF01807 CHC2 zinc finger VagVIO5_03580 PF08278 DNA primase DnaG DnaB-binding VagVIO5_03580 PF08275 DNA primase catalytic core, N-terminal domain VagVIO5_03580 PF10410 DnaB-helicase binding domain of primase VagVIO5_03590 PF09424 Yqey-like protein VagVIO5_03600 PF01165 Ribosomal protein S21 VagVIO5_03610 PF00814 Glycoprotease family VagVIO5_03620 PF00561 alpha/beta hydrolase fold VagVIO5_03630 PF02660 Glycerol-3-phosphate acyltransferase VagVIO5_03640 PF02152 Dihydroneopterin aldolase VagVIO5_03650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VagVIO5_03660 PF02673 Bacitracin resistance protein BacA VagVIO5_03670 PF12627 Probable RNA and SrmB- binding site of polymerase A VagVIO5_03670 PF01743 Poly A polymerase head domain VagVIO5_03670 PF01966 HD domain VagVIO5_03680 PF01471 Putative peptidoglycan binding domain VagVIO5_03680 PF13401 AAA domain VagVIO5_03710 PF08239 Bacterial SH3 domain VagVIO5_03720 PF01384 Phosphate transporter family VagVIO5_03730 PF01865 Protein of unknown function DUF47 VagVIO5_03740 PF01928 CYTH domain VagVIO5_03760 PF00672 HAMP domain VagVIO5_03760 PF02743 Cache domain VagVIO5_03760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_03770 PF03710 Glutamate-ammonia ligase adenylyltransferase VagVIO5_03770 PF08335 GlnD PII-uridylyltransferase VagVIO5_03780 PF00294 pfkB family carbohydrate kinase VagVIO5_03780 PF01467 Cytidylyltransferase-like VagVIO5_03790 PF02321 Outer membrane efflux protein VagVIO5_03800 PF00293 NUDIX domain VagVIO5_03810 PF06853 Protein of unknown function (DUF1249) VagVIO5_03820 PF00149 Calcineurin-like phosphoesterase VagVIO5_03830 PF05728 Uncharacterised protein family (UPF0227) VagVIO5_03840 PF00204 DNA gyrase B VagVIO5_03840 PF01751 Toprim domain VagVIO5_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_03840 PF00986 DNA gyrase B subunit, carboxyl terminus VagVIO5_03850 PF00521 DNA gyrase/topoisomerase IV, subunit A VagVIO5_03850 PF03989 DNA gyrase C-terminal domain, beta-propeller VagVIO5_03860 PF13180 PDZ domain VagVIO5_03870 PF00595 PDZ domain VagVIO5_03880 PF06295 Protein of unknown function (DUF1043) VagVIO5_03890 PF03969 AFG1-like ATPase VagVIO5_03900 PF00572 Ribosomal protein L13 VagVIO5_03910 PF00380 Ribosomal protein S9/S16 VagVIO5_03920 PF00355 Rieske [2Fe-2S] domain VagVIO5_03920 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VagVIO5_03930 PF00032 Cytochrome b(C-terminal)/b6/petD VagVIO5_03930 PF00033 Cytochrome b/b6/petB VagVIO5_03940 PF02167 Cytochrome C1 family VagVIO5_03950 PF02798 Glutathione S-transferase, N-terminal domain VagVIO5_03950 PF00043 Glutathione S-transferase, C-terminal domain VagVIO5_03960 PF04386 Stringent starvation protein B VagVIO5_03970 PF04972 BON domain VagVIO5_03980 PF13580 SIS domain VagVIO5_03990 PF02021 Uncharacterised protein family UPF0102 VagVIO5_04000 PF04348 LppC putative lipoprotein VagVIO5_04010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VagVIO5_04020 PF01795 MraW methylase family VagVIO5_04030 PF04999 Cell division protein FtsL VagVIO5_04040 PF03717 Penicillin-binding Protein dimerisation domain VagVIO5_04040 PF00905 Penicillin binding protein transpeptidase domain VagVIO5_04050 PF01225 Mur ligase family, catalytic domain VagVIO5_04050 PF02875 Mur ligase family, glutamate ligase domain VagVIO5_04050 PF08245 Mur ligase middle domain VagVIO5_04060 PF02875 Mur ligase family, glutamate ligase domain VagVIO5_04060 PF08245 Mur ligase middle domain VagVIO5_04060 PF01225 Mur ligase family, catalytic domain VagVIO5_04070 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VagVIO5_04070 PF00953 Glycosyl transferase family 4 VagVIO5_04080 PF08245 Mur ligase middle domain VagVIO5_04080 PF02875 Mur ligase family, glutamate ligase domain VagVIO5_04090 PF01098 Cell cycle protein VagVIO5_04100 PF04101 Glycosyltransferase family 28 C-terminal domain VagVIO5_04100 PF03033 Glycosyltransferase family 28 N-terminal domain VagVIO5_04110 PF02875 Mur ligase family, glutamate ligase domain VagVIO5_04110 PF08245 Mur ligase middle domain VagVIO5_04110 PF01225 Mur ligase family, catalytic domain VagVIO5_04120 PF08478 POTRA domain, FtsQ-type VagVIO5_04120 PF03799 Cell division protein FtsQ VagVIO5_04130 PF02491 SHS2 domain inserted in FTSA VagVIO5_04140 PF12327 FtsZ family, C-terminal domain VagVIO5_04140 PF00091 Tubulin/FtsZ family, GTPase domain VagVIO5_04150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VagVIO5_04170 PF02810 SEC-C motif VagVIO5_04170 PF07517 SecA DEAD-like domain VagVIO5_04170 PF01043 SecA preprotein cross-linking domain VagVIO5_04170 PF07516 SecA Wing and Scaffold domain VagVIO5_04180 PF00293 NUDIX domain VagVIO5_04190 PF01113 Dihydrodipicolinate reductase, N-terminus VagVIO5_04190 PF05173 Dihydrodipicolinate reductase, C-terminus VagVIO5_04210 PF00117 Glutamine amidotransferase class-I VagVIO5_04210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VagVIO5_04220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VagVIO5_04220 PF02142 MGS-like domain VagVIO5_04220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VagVIO5_04250 PF01925 Sulfite exporter TauE/SafE VagVIO5_04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_04260 PF03466 LysR substrate binding domain VagVIO5_04270 PF03458 UPF0126 domain VagVIO5_04280 PF01497 Periplasmic binding protein VagVIO5_04290 PF17113 Regulatory signalling modulator protein AmpE VagVIO5_04290 PF03186 CobD/Cbib protein VagVIO5_04300 PF01048 Phosphorylase superfamily VagVIO5_04320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VagVIO5_04320 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_04330 PF01645 Conserved region in glutamate synthase VagVIO5_04330 PF01493 GXGXG motif VagVIO5_04330 PF00310 Glutamine amidotransferases class-II VagVIO5_04330 PF04898 Glutamate synthase central domain VagVIO5_04340 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_04340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VagVIO5_04350 PF04898 Glutamate synthase central domain VagVIO5_04350 PF01493 GXGXG motif VagVIO5_04350 PF01645 Conserved region in glutamate synthase VagVIO5_04350 PF00310 Glutamine amidotransferases class-II VagVIO5_04360 PF04055 Radical SAM superfamily VagVIO5_04360 PF16199 Radical_SAM C-terminal domain VagVIO5_04370 PF00563 EAL domain VagVIO5_04370 PF00360 Phytochrome region VagVIO5_04370 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_04370 PF01590 GAF domain VagVIO5_04380 PF00989 PAS fold VagVIO5_04380 PF00072 Response regulator receiver domain VagVIO5_04380 PF01627 Hpt domain VagVIO5_04380 PF18415 Histidine kinase receptor ArcB trans-membrane domain VagVIO5_04380 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_04400 PF00072 Response regulator receiver domain VagVIO5_04400 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_04420 PF03737 Aldolase/RraA VagVIO5_04440 PF03447 Homoserine dehydrogenase, NAD binding domain VagVIO5_04440 PF00742 Homoserine dehydrogenase VagVIO5_04440 PF13840 ACT domain VagVIO5_04440 PF01842 ACT domain VagVIO5_04440 PF00696 Amino acid kinase family VagVIO5_04450 PF08544 GHMP kinases C terminal VagVIO5_04450 PF00288 GHMP kinases N terminal domain VagVIO5_04460 PF14821 Threonine synthase N terminus VagVIO5_04460 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_04480 PF01228 Glycine radical VagVIO5_04490 PF01261 Xylose isomerase-like TIM barrel VagVIO5_04500 PF03167 Uracil DNA glycosylase superfamily VagVIO5_04530 PF01235 Sodium:alanine symporter family VagVIO5_04540 PF03883 Peroxide stress protein YaaA VagVIO5_04550 PF00270 DEAD/DEAH box helicase VagVIO5_04550 PF00271 Helicase conserved C-terminal domain VagVIO5_04560 PF05175 Methyltransferase small domain VagVIO5_04570 PF05525 Branched-chain amino acid transport protein VagVIO5_04580 PF00258 Flavodoxin VagVIO5_04590 PF00589 Phage integrase family VagVIO5_04590 PF02899 Phage integrase, N-terminal SAM-like domain VagVIO5_04600 PF10411 Disulfide bond isomerase protein N-terminus VagVIO5_04600 PF13098 Thioredoxin-like domain VagVIO5_04610 PF01368 DHH family VagVIO5_04610 PF02272 DHHA1 domain VagVIO5_04610 PF17768 RecJ OB domain VagVIO5_04620 PF00472 RF-1 domain VagVIO5_04620 PF03462 PCRF domain VagVIO5_04630 PF01336 OB-fold nucleic acid binding domain VagVIO5_04630 PF00152 tRNA synthetases class II (D, K and N) VagVIO5_04640 PF00158 Sigma-54 interaction domain VagVIO5_04640 PF00072 Response regulator receiver domain VagVIO5_04640 PF02954 Bacterial regulatory protein, Fis family VagVIO5_04670 PF00248 Aldo/keto reductase family VagVIO5_04690 PF02976 DNA mismatch repair enzyme MutH VagVIO5_04700 PF00293 NUDIX domain VagVIO5_04710 PF02896 PEP-utilising enzyme, TIM barrel domain VagVIO5_04710 PF00391 PEP-utilising enzyme, mobile domain VagVIO5_04710 PF05524 PEP-utilising enzyme, N-terminal VagVIO5_04710 PF01590 GAF domain VagVIO5_04720 PF01925 Sulfite exporter TauE/SafE VagVIO5_04740 PF00303 Thymidylate synthase VagVIO5_04760 PF02690 Na+/Pi-cotransporter VagVIO5_04770 PF03466 LysR substrate binding domain VagVIO5_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_04780 PF01022 Bacterial regulatory protein, arsR family VagVIO5_04790 PF01649 Ribosomal protein S20 VagVIO5_04800 PF03023 Lipid II flippase MurJ VagVIO5_04810 PF01687 Riboflavin kinase VagVIO5_04810 PF06574 FAD synthetase VagVIO5_04820 PF00133 tRNA synthetases class I (I, L, M and V) VagVIO5_04820 PF08264 Anticodon-binding domain of tRNA VagVIO5_04820 PF06827 Zinc finger found in FPG and IleRS VagVIO5_04830 PF01252 Signal peptidase (SPase) II VagVIO5_04840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VagVIO5_04850 PF02401 LytB protein VagVIO5_04860 PF01527 Transposase VagVIO5_04870 PF00665 Integrase core domain VagVIO5_04890 PF04397 LytTr DNA-binding domain VagVIO5_04890 PF00072 Response regulator receiver domain VagVIO5_04900 PF06580 Histidine kinase VagVIO5_04900 PF07694 5TMR of 5TMR-LYT VagVIO5_04910 PF02554 Carbon starvation protein CstA VagVIO5_04940 PF01380 SIS domain VagVIO5_04950 PF03702 Anhydro-N-acetylmuramic acid kinase VagVIO5_04960 PF00933 Glycosyl hydrolase family 3 N terminal domain VagVIO5_04970 PF00793 DAHP synthetase I family VagVIO5_04980 PF01817 Chorismate mutase type II VagVIO5_04980 PF02153 Prephenate dehydrogenase VagVIO5_04990 PF01551 Peptidase family M23 VagVIO5_04990 PF01464 Transglycosylase SLT domain VagVIO5_04990 PF10145 Phage-related minor tail protein VagVIO5_05000 PF07238 PilZ domain VagVIO5_05010 PF12848 ABC transporter VagVIO5_05010 PF00005 ABC transporter VagVIO5_05020 PF01464 Transglycosylase SLT domain VagVIO5_05020 PF14718 Soluble lytic murein transglycosylase L domain VagVIO5_05030 PF01371 Trp repressor protein VagVIO5_05040 PF01931 Protein of unknown function DUF84 VagVIO5_05050 PF01817 Chorismate mutase type II VagVIO5_05050 PF00800 Prephenate dehydratase VagVIO5_05060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VagVIO5_05070 PF01464 Transglycosylase SLT domain VagVIO5_05070 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_05080 PF13525 Outer membrane lipoprotein VagVIO5_05090 PF01479 S4 domain VagVIO5_05090 PF00849 RNA pseudouridylate synthase VagVIO5_05110 PF10431 C-terminal, D2-small domain, of ClpB protein VagVIO5_05110 PF02861 Clp amino terminal domain, pathogenicity island component VagVIO5_05110 PF17871 AAA lid domain VagVIO5_05110 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_05110 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_05130 PF03411 Penicillin-insensitive murein endopeptidase VagVIO5_05150 PF00037 4Fe-4S binding domain VagVIO5_05170 PF04381 Putative exonuclease, RdgC VagVIO5_05180 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_05180 PF00072 Response regulator receiver domain VagVIO5_05190 PF11808 Phosphate regulon sensor protein PhoR VagVIO5_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_05190 PF00989 PAS fold VagVIO5_05190 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_05200 PF12849 PBP superfamily domain VagVIO5_05210 PF02541 Ppx/GppA phosphatase family VagVIO5_05220 PF13089 Polyphosphate kinase N-terminal domain VagVIO5_05220 PF02503 Polyphosphate kinase middle domain VagVIO5_05220 PF17941 Polyphosphate kinase C-terminal domain 1 VagVIO5_05220 PF13090 Polyphosphate kinase C-terminal domain 2 VagVIO5_05230 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_05240 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_05250 PF00005 ABC transporter VagVIO5_05260 PF01895 PhoU domain VagVIO5_05270 PF03976 Polyphosphate kinase 2 (PPK2) VagVIO5_05280 PF03932 CutC family VagVIO5_05290 PF10417 C-terminal domain of 1-Cys peroxiredoxin VagVIO5_05290 PF00578 AhpC/TSA family VagVIO5_05300 PF03466 LysR substrate binding domain VagVIO5_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_05310 PF01274 Malate synthase VagVIO5_05320 PF00463 Isocitrate lyase family VagVIO5_05330 PF00571 CBS domain VagVIO5_05350 PF02547 Queuosine biosynthesis protein VagVIO5_05360 PF01702 Queuine tRNA-ribosyltransferase VagVIO5_05370 PF02699 Preprotein translocase subunit VagVIO5_05380 PF02355 Protein export membrane protein VagVIO5_05380 PF13721 SecD export protein N-terminal TM region VagVIO5_05380 PF07549 SecD/SecF GG Motif VagVIO5_05390 PF02355 Protein export membrane protein VagVIO5_05390 PF07549 SecD/SecF GG Motif VagVIO5_05400 PF00459 Inositol monophosphatase family VagVIO5_05410 PF00588 SpoU rRNA Methylase family VagVIO5_05420 PF02082 Transcriptional regulator VagVIO5_05430 PF00266 Aminotransferase class-V VagVIO5_05440 PF01592 NifU-like N terminal domain VagVIO5_05450 PF01521 Iron-sulphur cluster biosynthesis VagVIO5_05460 PF00226 DnaJ domain VagVIO5_05460 PF07743 HSCB C-terminal oligomerisation domain VagVIO5_05470 PF00012 Hsp70 protein VagVIO5_05480 PF00111 2Fe-2S iron-sulfur cluster binding domain VagVIO5_05490 PF04384 Iron-sulphur cluster assembly VagVIO5_05500 PF12404 Peptidase VagVIO5_05500 PF00883 Cytosol aminopeptidase family, catalytic domain VagVIO5_05510 PF00334 Nucleoside diphosphate kinase VagVIO5_05520 PF04055 Radical SAM superfamily VagVIO5_05530 PF13464 Domain of unknown function (DUF4115) VagVIO5_05540 PF04551 GcpE protein VagVIO5_05550 PF03129 Anticodon binding domain VagVIO5_05550 PF13393 Histidyl-tRNA synthetase VagVIO5_05560 PF09976 Tetratricopeptide repeat-like domain VagVIO5_05570 PF13360 PQQ-like domain VagVIO5_05580 PF01926 50S ribosome-binding GTPase VagVIO5_05580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VagVIO5_05610 PF13742 OB-fold nucleic acid binding domain VagVIO5_05610 PF02601 Exonuclease VII, large subunit VagVIO5_05620 PF00478 IMP dehydrogenase / GMP reductase domain VagVIO5_05620 PF00571 CBS domain VagVIO5_05630 PF00958 GMP synthase C terminal domain VagVIO5_05630 PF00117 Glutamine amidotransferase class-I VagVIO5_05630 PF02540 NAD synthase VagVIO5_05640 PF13356 Arm DNA-binding domain VagVIO5_05640 PF00589 Phage integrase family VagVIO5_05720 PF03432 Relaxase/Mobilisation nuclease domain VagVIO5_05720 PF18821 Large polyvalent protein-associated domain 7 VagVIO5_05780 PF02384 N-6 DNA Methylase VagVIO5_05800 PF03553 Na+/H+ antiporter family VagVIO5_05810 PF06483 Chitinase C VagVIO5_05810 PF00704 Glycosyl hydrolases family 18 VagVIO5_05820 PF01184 GPR1/FUN34/yaaH family VagVIO5_05830 PF01235 Sodium:alanine symporter family VagVIO5_05840 PF01266 FAD dependent oxidoreductase VagVIO5_05860 PF07969 Amidohydrolase family VagVIO5_05870 PF01053 Cys/Met metabolism PLP-dependent enzyme VagVIO5_05880 PF00202 Aminotransferase class-III VagVIO5_05920 PF00795 Carbon-nitrogen hydrolase VagVIO5_05920 PF00583 Acetyltransferase (GNAT) family VagVIO5_05930 PF03466 LysR substrate binding domain VagVIO5_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_05950 PF01668 SmpB protein VagVIO5_05960 PF03364 Polyketide cyclase / dehydrase and lipid transport VagVIO5_05970 PF03658 RnfH family Ubiquitin VagVIO5_05980 PF04355 SmpA / OmlA family VagVIO5_05990 PF02463 RecF/RecN/SMC N terminal domain VagVIO5_06010 PF01513 ATP-NAD kinase VagVIO5_06020 PF01025 GrpE VagVIO5_06030 PF00375 Sodium:dicarboxylate symporter family VagVIO5_06040 PF00012 Hsp70 protein VagVIO5_06050 PF00226 DnaJ domain VagVIO5_06050 PF00684 DnaJ central domain VagVIO5_06050 PF01556 DnaJ C terminal domain VagVIO5_06060 PF07963 Prokaryotic N-terminal methylation motif VagVIO5_06060 PF00114 Pilin (bacterial filament) VagVIO5_06110 PF03806 AbgT putative transporter family VagVIO5_06120 PF14437 MafB19-like deaminase VagVIO5_06130 PF01464 Transglycosylase SLT domain VagVIO5_06130 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_06140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VagVIO5_06140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VagVIO5_06140 PF02769 AIR synthase related protein, C-terminal domain VagVIO5_06170 PF00593 TonB dependent receptor VagVIO5_06170 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_06200 PF07687 Peptidase dimerisation domain VagVIO5_06200 PF01546 Peptidase family M20/M25/M40 VagVIO5_06210 PF00860 Permease family VagVIO5_06220 PF00156 Phosphoribosyl transferase domain VagVIO5_06240 PF07417 Sigma factor-binding transcriptional regulator Crl VagVIO5_06250 PF07417 Sigma factor-binding transcriptional regulator Crl VagVIO5_06260 PF01472 PUA domain VagVIO5_06260 PF00696 Amino acid kinase family VagVIO5_06270 PF00171 Aldehyde dehydrogenase family VagVIO5_06280 PF03477 ATP cone domain VagVIO5_06290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VagVIO5_06290 PF01872 RibD C-terminal domain VagVIO5_06300 PF00677 Lumazine binding domain VagVIO5_06310 PF00925 GTP cyclohydrolase II VagVIO5_06310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VagVIO5_06320 PF00885 6,7-dimethyl-8-ribityllumazine synthase VagVIO5_06330 PF01029 NusB family VagVIO5_06340 PF00586 AIR synthase related protein, N-terminal domain VagVIO5_06340 PF02769 AIR synthase related protein, C-terminal domain VagVIO5_06350 PF04608 Phosphatidylglycerophosphatase A VagVIO5_06360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VagVIO5_06360 PF02779 Transketolase, pyrimidine binding domain VagVIO5_06360 PF02780 Transketolase, C-terminal domain VagVIO5_06370 PF00348 Polyprenyl synthetase VagVIO5_06380 PF02609 Exonuclease VII small subunit VagVIO5_06390 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_06400 PF00691 OmpA family VagVIO5_06400 PF13677 Membrane MotB of proton-channel complex MotA/MotB VagVIO5_06410 PF02568 Thiamine biosynthesis protein (ThiI) VagVIO5_06410 PF02926 THUMP domain VagVIO5_06430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_06430 PF03466 LysR substrate binding domain VagVIO5_06450 PF04241 Protein of unknown function (DUF423) VagVIO5_06460 PF18125 RlmM ferredoxin-like domain VagVIO5_06460 PF01728 FtsJ-like methyltransferase VagVIO5_06470 PF01367 5'-3' exonuclease, C-terminal SAM fold VagVIO5_06470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VagVIO5_06480 PF11892 Domain of unknown function (DUF3412) VagVIO5_06480 PF03641 Possible lysine decarboxylase VagVIO5_06480 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VagVIO5_06490 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_06490 PF00072 Response regulator receiver domain VagVIO5_06510 PF14489 QueF-like protein VagVIO5_06510 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VagVIO5_06520 PF07348 Syd protein (SUKH-2) VagVIO5_06530 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VagVIO5_06540 PF03180 NLPA lipoprotein VagVIO5_06550 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_06560 PF09383 NIL domain VagVIO5_06560 PF00005 ABC transporter VagVIO5_06580 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_06590 PF00367 phosphotransferase system, EIIB VagVIO5_06590 PF02378 Phosphotransferase system, EIIC VagVIO5_06600 PF00128 Alpha amylase, catalytic domain VagVIO5_06600 PF16657 Maltogenic Amylase, C-terminal domain VagVIO5_06640 PF00464 Serine hydroxymethyltransferase VagVIO5_06650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VagVIO5_06650 PF04055 Radical SAM superfamily VagVIO5_06660 PF03099 Biotin/lipoate A/B protein ligase family VagVIO5_06670 PF04359 Protein of unknown function (DUF493) VagVIO5_06680 PF07943 Penicillin-binding protein 5, C-terminal domain VagVIO5_06680 PF00768 D-alanyl-D-alanine carboxypeptidase VagVIO5_06690 PF05036 Sporulation related domain VagVIO5_06690 PF03330 Lytic transglycolase VagVIO5_06700 PF01098 Cell cycle protein VagVIO5_06710 PF03717 Penicillin-binding Protein dimerisation domain VagVIO5_06710 PF00905 Penicillin binding protein transpeptidase domain VagVIO5_06720 PF02590 Predicted SPOUT methyltransferase VagVIO5_06740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VagVIO5_06740 PF06144 DNA polymerase III, delta subunit VagVIO5_06750 PF04390 Lipopolysaccharide-assembly VagVIO5_06760 PF00133 tRNA synthetases class I (I, L, M and V) VagVIO5_06760 PF13603 Leucyl-tRNA synthetase, Domain 2 VagVIO5_06760 PF08264 Anticodon-binding domain of tRNA VagVIO5_06770 PF07295 Zinc-ribbon containing domain VagVIO5_06780 PF00795 Carbon-nitrogen hydrolase VagVIO5_06790 PF00571 CBS domain VagVIO5_06790 PF03471 Transporter associated domain VagVIO5_06800 PF02130 Uncharacterized protein family UPF0054 VagVIO5_06810 PF02562 PhoH-like protein VagVIO5_06820 PF04055 Radical SAM superfamily VagVIO5_06820 PF01938 TRAM domain VagVIO5_06820 PF00919 Uncharacterized protein family UPF0004 VagVIO5_06830 PF01494 FAD binding domain VagVIO5_06840 PF06071 Protein of unknown function (DUF933) VagVIO5_06840 PF01926 50S ribosome-binding GTPase VagVIO5_06850 PF01195 Peptidyl-tRNA hydrolase VagVIO5_06860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VagVIO5_06860 PF14572 Phosphoribosyl synthetase-associated domain VagVIO5_06870 PF08544 GHMP kinases C terminal VagVIO5_06870 PF00288 GHMP kinases N terminal domain VagVIO5_06880 PF03550 Outer membrane lipoprotein LolB VagVIO5_06890 PF01488 Shikimate / quinate 5-dehydrogenase VagVIO5_06890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VagVIO5_06890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VagVIO5_06900 PF00472 RF-1 domain VagVIO5_06900 PF03462 PCRF domain VagVIO5_06910 PF17827 PrmC N-terminal domain VagVIO5_06910 PF13847 Methyltransferase domain VagVIO5_06920 PF04247 Invasion gene expression up-regulator, SirB VagVIO5_06930 PF13369 Transglutaminase-like superfamily VagVIO5_06940 PF00793 DAHP synthetase I family VagVIO5_06950 PF00149 Calcineurin-like phosphoesterase VagVIO5_06950 PF02872 5'-nucleotidase, C-terminal domain VagVIO5_06960 PF04073 Aminoacyl-tRNA editing domain VagVIO5_06970 PF00849 RNA pseudouridylate synthase VagVIO5_06970 PF01479 S4 domain VagVIO5_06980 PF01713 Smr domain VagVIO5_07020 PF02838 Glycosyl hydrolase family 20, domain 2 VagVIO5_07020 PF00728 Glycosyl hydrolase family 20, catalytic domain VagVIO5_07020 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VagVIO5_07020 PF03173 Putative carbohydrate binding domain VagVIO5_07050 PF00403 Heavy-metal-associated domain VagVIO5_07060 PF13609 Gram-negative porin VagVIO5_07070 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VagVIO5_07080 PF00749 tRNA synthetases class I (E and Q), catalytic domain VagVIO5_07090 PF00691 OmpA family VagVIO5_07090 PF01389 OmpA-like transmembrane domain VagVIO5_07170 PF00072 Response regulator receiver domain VagVIO5_07170 PF01584 CheW-like domain VagVIO5_07180 PF01739 CheR methyltransferase, SAM binding domain VagVIO5_07180 PF03705 CheR methyltransferase, all-alpha domain VagVIO5_07190 PF00460 Flagella basal body rod protein VagVIO5_07200 PF00460 Flagella basal body rod protein VagVIO5_07200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_07210 PF13860 FlgD Ig-like domain VagVIO5_07210 PF13861 FlgD Tudor-like domain VagVIO5_07210 PF03963 Flagellar hook capping protein - N-terminal region VagVIO5_07220 PF00460 Flagella basal body rod protein VagVIO5_07220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_07220 PF07559 Flagellar basal body protein FlaE VagVIO5_07230 PF00460 Flagella basal body rod protein VagVIO5_07230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_07240 PF00460 Flagella basal body rod protein VagVIO5_07240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_07250 PF02107 Flagellar L-ring protein VagVIO5_07260 PF02119 Flagellar P-ring protein VagVIO5_07270 PF10135 Rod binding protein VagVIO5_07270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VagVIO5_07280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_07280 PF07196 Flagellin hook IN motif VagVIO5_07290 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_07310 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_07310 PF07196 Flagellin hook IN motif VagVIO5_07310 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_07320 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_07320 PF07196 Flagellin hook IN motif VagVIO5_07320 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_07330 PF07196 Flagellin hook IN motif VagVIO5_07330 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_07330 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_07340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VagVIO5_07350 PF05524 PEP-utilising enzyme, N-terminal VagVIO5_07350 PF00391 PEP-utilising enzyme, mobile domain VagVIO5_07350 PF02896 PEP-utilising enzyme, TIM barrel domain VagVIO5_07370 PF00381 PTS HPr component phosphorylation site VagVIO5_07380 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_07400 PF04354 ZipA, C-terminal FtsZ-binding domain VagVIO5_07410 PF03120 NAD-dependent DNA ligase OB-fold domain VagVIO5_07410 PF00533 BRCA1 C Terminus (BRCT) domain VagVIO5_07410 PF12826 Helix-hairpin-helix motif VagVIO5_07410 PF01653 NAD-dependent DNA ligase adenylation domain VagVIO5_07410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VagVIO5_07420 PF03573 outer membrane porin, OprD family VagVIO5_07460 PF16200 C-terminal region of band_7 VagVIO5_07460 PF01145 SPFH domain / Band 7 family VagVIO5_07470 PF00085 Thioredoxin VagVIO5_07480 PF00106 short chain dehydrogenase VagVIO5_07490 PF01370 NAD dependent epimerase/dehydratase family VagVIO5_07490 PF08338 Domain of unknown function (DUF1731) VagVIO5_07500 PF07556 Protein of unknown function (DUF1538) VagVIO5_07510 PF07556 Protein of unknown function (DUF1538) VagVIO5_07550 PF12850 Calcineurin-like phosphoesterase superfamily domain VagVIO5_07580 PF17323 Trans-membrane regulatory protein ToxS VagVIO5_07590 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_07600 PF00183 Hsp90 protein VagVIO5_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_07610 PF05191 Adenylate kinase, active site lid VagVIO5_07620 PF00762 Ferrochelatase VagVIO5_07640 PF00854 POT family VagVIO5_07650 PF02357 Transcription termination factor nusG VagVIO5_07660 PF00733 Asparagine synthase VagVIO5_07660 PF13537 Glutamine amidotransferase domain VagVIO5_07670 PF00999 Sodium/hydrogen exchanger family VagVIO5_07670 PF02254 TrkA-N domain VagVIO5_07680 PF00480 ROK family VagVIO5_07680 PF01047 MarR family VagVIO5_07690 PF01979 Amidohydrolase family VagVIO5_07700 PF00367 phosphotransferase system, EIIB VagVIO5_07700 PF02378 Phosphotransferase system, EIIC VagVIO5_07700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VagVIO5_07710 PF00749 tRNA synthetases class I (E and Q), catalytic domain VagVIO5_07710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VagVIO5_07720 PF01475 Ferric uptake regulator family VagVIO5_07740 PF00258 Flavodoxin VagVIO5_07760 PF12697 Alpha/beta hydrolase family VagVIO5_07770 PF17206 SeqA protein N-terminal domain VagVIO5_07770 PF03925 SeqA protein C-terminal domain VagVIO5_07780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VagVIO5_07780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VagVIO5_07780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VagVIO5_07780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VagVIO5_07800 PF01784 NIF3 (NGG1p interacting factor 3) VagVIO5_07810 PF00285 Citrate synthase, C-terminal domain VagVIO5_07820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VagVIO5_07830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VagVIO5_07840 PF00890 FAD binding domain VagVIO5_07840 PF02910 Fumarate reductase flavoprotein C-term VagVIO5_07850 PF13085 2Fe-2S iron-sulfur cluster binding domain VagVIO5_07860 PF02779 Transketolase, pyrimidine binding domain VagVIO5_07860 PF16078 2-oxoglutarate dehydrogenase N-terminus VagVIO5_07860 PF00676 Dehydrogenase E1 component VagVIO5_07860 PF16870 2-oxoglutarate dehydrogenase C-terminal VagVIO5_07870 PF02817 e3 binding domain VagVIO5_07870 PF00364 Biotin-requiring enzyme VagVIO5_07870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VagVIO5_07880 PF00549 CoA-ligase VagVIO5_07880 PF08442 ATP-grasp domain VagVIO5_07890 PF00549 CoA-ligase VagVIO5_07890 PF02629 CoA binding domain VagVIO5_07900 PF00950 ABC 3 transport family VagVIO5_07910 PF00005 ABC transporter VagVIO5_07920 PF01297 Zinc-uptake complex component A periplasmic VagVIO5_07930 PF12833 Helix-turn-helix domain VagVIO5_07930 PF02311 AraC-like ligand binding domain VagVIO5_07940 PF04023 FeoA domain VagVIO5_07950 PF07670 Nucleoside recognition VagVIO5_07950 PF07664 Ferrous iron transport protein B C terminus VagVIO5_07950 PF17910 FeoB cytosolic helical domain VagVIO5_07950 PF02421 Ferrous iron transport protein B VagVIO5_07980 PF05746 DALR anticodon binding domain VagVIO5_07980 PF03485 Arginyl tRNA synthetase N terminal domain VagVIO5_07980 PF00750 tRNA synthetases class I (R) VagVIO5_07990 PF06185 YecM protein VagVIO5_08010 PF00089 Trypsin VagVIO5_08020 PF00551 Formyl transferase VagVIO5_08020 PF01842 ACT domain VagVIO5_08030 PF04851 Type III restriction enzyme, res subunit VagVIO5_08030 PF13307 Helicase C-terminal domain VagVIO5_08040 PF00814 Glycoprotease family VagVIO5_08060 PF03843 Outer membrane lipoprotein Slp family VagVIO5_08070 PF00561 alpha/beta hydrolase fold VagVIO5_08080 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_08080 PF00501 AMP-binding enzyme VagVIO5_08090 PF00570 HRDC domain VagVIO5_08090 PF01612 3'-5' exonuclease VagVIO5_08100 PF03776 Septum formation topological specificity factor MinE VagVIO5_08110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VagVIO5_08120 PF03775 Septum formation inhibitor MinC, C-terminal domain VagVIO5_08120 PF05209 Septum formation inhibitor MinC, N-terminal domain VagVIO5_08130 PF05166 YcgL domain VagVIO5_08140 PF13406 Transglycosylase SLT domain VagVIO5_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_08150 PF03466 LysR substrate binding domain VagVIO5_08160 PF07662 Na+ dependent nucleoside transporter C-terminus VagVIO5_08160 PF01773 Na+ dependent nucleoside transporter N-terminus VagVIO5_08160 PF07670 Nucleoside recognition VagVIO5_08170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VagVIO5_08170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VagVIO5_08180 PF01209 ubiE/COQ5 methyltransferase family VagVIO5_08190 PF00109 Beta-ketoacyl synthase, N-terminal domain VagVIO5_08190 PF02801 Beta-ketoacyl synthase, C-terminal domain VagVIO5_08210 PF07977 FabA-like domain VagVIO5_08220 PF00109 Beta-ketoacyl synthase, N-terminal domain VagVIO5_08220 PF02801 Beta-ketoacyl synthase, C-terminal domain VagVIO5_08270 PF00221 Aromatic amino acid lyase VagVIO5_08280 PF00535 Glycosyl transferase family 2 VagVIO5_08290 PF07977 FabA-like domain VagVIO5_08320 PF00550 Phosphopantetheine attachment site VagVIO5_08330 PF00550 Phosphopantetheine attachment site VagVIO5_08380 PF04820 Tryptophan halogenase VagVIO5_08400 PF01595 Cyclin M transmembrane N-terminal domain VagVIO5_08400 PF03471 Transporter associated domain VagVIO5_08400 PF00571 CBS domain VagVIO5_08410 PF00270 DEAD/DEAH box helicase VagVIO5_08410 PF00271 Helicase conserved C-terminal domain VagVIO5_08420 PF02254 TrkA-N domain VagVIO5_08420 PF02080 TrkA-C domain VagVIO5_08430 PF02386 Cation transport protein VagVIO5_08460 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VagVIO5_08470 PF03480 Bacterial extracellular solute-binding protein, family 7 VagVIO5_08480 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VagVIO5_08490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VagVIO5_08500 PF02954 Bacterial regulatory protein, Fis family VagVIO5_08500 PF00072 Response regulator receiver domain VagVIO5_08500 PF00158 Sigma-54 interaction domain VagVIO5_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_08510 PF02743 Cache domain VagVIO5_08510 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_08520 PF05697 Bacterial trigger factor protein (TF) VagVIO5_08520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VagVIO5_08520 PF05698 Bacterial trigger factor protein (TF) C-terminus VagVIO5_08530 PF00574 Clp protease VagVIO5_08540 PF10431 C-terminal, D2-small domain, of ClpB protein VagVIO5_08540 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_08540 PF06689 ClpX C4-type zinc finger VagVIO5_08550 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_08550 PF02190 ATP-dependent protease La (LON) substrate-binding domain VagVIO5_08550 PF05362 Lon protease (S16) C-terminal proteolytic domain VagVIO5_08560 PF00216 Bacterial DNA-binding protein VagVIO5_08570 PF13145 PPIC-type PPIASE domain VagVIO5_08610 PF01966 HD domain VagVIO5_08610 PF13286 Phosphohydrolase-associated domain VagVIO5_08630 PF00155 Aminotransferase class I and II VagVIO5_08640 PF00425 chorismate binding enzyme VagVIO5_08650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VagVIO5_08650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VagVIO5_08650 PF16582 Middle domain of thiamine pyrophosphate VagVIO5_08660 PF12697 Alpha/beta hydrolase family VagVIO5_08670 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_08680 PF13378 Enolase C-terminal domain-like VagVIO5_08690 PF00501 AMP-binding enzyme VagVIO5_08690 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_08710 PF03601 Conserved hypothetical protein 698 VagVIO5_08720 PF07690 Major Facilitator Superfamily VagVIO5_08750 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_08750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_08760 PF00873 AcrB/AcrD/AcrF family VagVIO5_08800 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_08810 PF13404 AsnC-type helix-turn-helix domain VagVIO5_08810 PF01037 Lrp/AsnC ligand binding domain VagVIO5_08840 PF09619 Type III secretion system lipoprotein chaperone (YscW) VagVIO5_08850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VagVIO5_08870 PF00072 Response regulator receiver domain VagVIO5_08870 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_08880 PF01527 Transposase VagVIO5_08890 PF00665 Integrase core domain VagVIO5_08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_08910 PF03466 LysR substrate binding domain VagVIO5_08950 PF08240 Alcohol dehydrogenase GroES-like domain VagVIO5_08950 PF00107 Zinc-binding dehydrogenase VagVIO5_08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_08980 PF03466 LysR substrate binding domain VagVIO5_08990 PF12706 Beta-lactamase superfamily domain VagVIO5_09000 PF12852 Cupin VagVIO5_09000 PF12833 Helix-turn-helix domain VagVIO5_09010 PF00588 SpoU rRNA Methylase family VagVIO5_09010 PF08032 RNA 2'-O ribose methyltransferase substrate binding VagVIO5_09020 PF00571 CBS domain VagVIO5_09020 PF00478 IMP dehydrogenase / GMP reductase domain VagVIO5_09030 PF00403 Heavy-metal-associated domain VagVIO5_09040 PF01048 Phosphorylase superfamily VagVIO5_09060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_09060 PF00672 HAMP domain VagVIO5_09070 PF01230 HIT domain VagVIO5_09100 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VagVIO5_09100 PF13036 Peptidoglycan-synthase activator LpoB VagVIO5_09110 PF01636 Phosphotransferase enzyme family VagVIO5_09120 PF05728 Uncharacterised protein family (UPF0227) VagVIO5_09130 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_09160 PF00271 Helicase conserved C-terminal domain VagVIO5_09160 PF02559 CarD-like/TRCF domain VagVIO5_09160 PF00270 DEAD/DEAH box helicase VagVIO5_09160 PF03461 TRCF domain VagVIO5_09160 PF17757 UvrB interaction domain VagVIO5_09180 PF12704 MacB-like periplasmic core domain VagVIO5_09180 PF02687 FtsX-like permease family VagVIO5_09190 PF00005 ABC transporter VagVIO5_09200 PF12704 MacB-like periplasmic core domain VagVIO5_09200 PF02687 FtsX-like permease family VagVIO5_09220 PF00753 Metallo-beta-lactamase superfamily VagVIO5_09220 PF13567 Domain of unknown function (DUF4131) VagVIO5_09220 PF03772 Competence protein VagVIO5_09230 PF00005 ABC transporter VagVIO5_09230 PF00664 ABC transporter transmembrane region VagVIO5_09240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VagVIO5_09250 PF03966 Trm112p-like protein VagVIO5_09260 PF02348 Cytidylyltransferase VagVIO5_09270 PF04293 SpoVR like protein VagVIO5_09280 PF04285 Protein of unknown function (DUF444) VagVIO5_09290 PF06798 PrkA serine protein kinase C-terminal domain VagVIO5_09290 PF08298 PrkA AAA domain VagVIO5_09300 PF03887 YfbU domain VagVIO5_09320 PF04055 Radical SAM superfamily VagVIO5_09340 PF01228 Glycine radical VagVIO5_09340 PF02901 Pyruvate formate lyase-like VagVIO5_09370 PF00005 ABC transporter VagVIO5_09380 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_09390 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_09400 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_09420 PF03372 Endonuclease/Exonuclease/phosphatase family VagVIO5_09430 PF10689 Protein of unknown function (DUF2496) VagVIO5_09440 PF07445 Primosomal replication protein priC VagVIO5_09450 PF01925 Sulfite exporter TauE/SafE VagVIO5_09460 PF13307 Helicase C-terminal domain VagVIO5_09460 PF06733 DEAD_2 VagVIO5_09480 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VagVIO5_09490 PF00849 RNA pseudouridylate synthase VagVIO5_09500 PF03971 Monomeric isocitrate dehydrogenase VagVIO5_09510 PF00313 'Cold-shock' DNA-binding domain VagVIO5_09520 PF02617 ATP-dependent Clp protease adaptor protein ClpS VagVIO5_09530 PF10431 C-terminal, D2-small domain, of ClpB protein VagVIO5_09530 PF17871 AAA lid domain VagVIO5_09530 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_09530 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_09530 PF02861 Clp amino terminal domain, pathogenicity island component VagVIO5_09540 PF01176 Translation initiation factor 1A / IF-1 VagVIO5_09550 PF04377 Arginine-tRNA-protein transferase, C terminus VagVIO5_09550 PF04376 Arginine-tRNA-protein transferase, N terminus VagVIO5_09560 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VagVIO5_09580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VagVIO5_09590 PF10692 Protein of unknown function (DUF2498) VagVIO5_09600 PF08272 Topoisomerase I zinc-ribbon-like VagVIO5_09600 PF01131 DNA topoisomerase VagVIO5_09600 PF01751 Toprim domain VagVIO5_09600 PF01396 Topoisomerase DNA binding C4 zinc finger VagVIO5_09610 PF00483 Nucleotidyl transferase VagVIO5_09620 PF08323 Starch synthase catalytic domain VagVIO5_09620 PF00534 Glycosyl transferases group 1 VagVIO5_09660 PF04994 TfoX C-terminal domain VagVIO5_09660 PF04993 TfoX N-terminal domain VagVIO5_09670 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_09680 PF02613 Nitrate reductase delta subunit VagVIO5_09690 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_09690 PF00072 Response regulator receiver domain VagVIO5_09700 PF02698 DUF218 domain VagVIO5_09710 PF13847 Methyltransferase domain VagVIO5_09720 PF17192 MukF middle domain VagVIO5_09720 PF17193 MukF C-terminal domain VagVIO5_09720 PF03882 MukF winged-helix domain VagVIO5_09730 PF04288 MukE-like family VagVIO5_09740 PF16330 MukB hinge domain VagVIO5_09740 PF04310 MukB N-terminal VagVIO5_09780 PF08443 RimK-like ATP-grasp domain VagVIO5_09780 PF18030 RimK PreATP-grasp domain VagVIO5_09790 PF08003 Protein of unknown function (DUF1698) VagVIO5_09800 PF13649 Methyltransferase domain VagVIO5_09810 PF01904 Protein of unknown function DUF72 VagVIO5_09820 PF00152 tRNA synthetases class II (D, K and N) VagVIO5_09820 PF01336 OB-fold nucleic acid binding domain VagVIO5_09820 PF02938 GAD domain VagVIO5_09830 PF01709 Transcriptional regulator VagVIO5_09840 PF02075 Crossover junction endodeoxyribonuclease RuvC VagVIO5_09850 PF07499 RuvA, C-terminal domain VagVIO5_09850 PF01330 RuvA N terminal domain VagVIO5_09860 PF05496 Holliday junction DNA helicase RuvB P-loop domain VagVIO5_09860 PF05491 RuvB C-terminal winged helix domain VagVIO5_09860 PF17864 RuvB AAA lid domain VagVIO5_09870 PF01654 Cytochrome bd terminal oxidase subunit I VagVIO5_09880 PF02322 Cytochrome bd terminal oxidase subunit II VagVIO5_09890 PF08173 Membrane bound YbgT-like protein VagVIO5_09910 PF03061 Thioesterase superfamily VagVIO5_09920 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_09930 PF02472 Biopolymer transport protein ExbD/TolR VagVIO5_09950 PF07676 WD40-like Beta Propeller Repeat VagVIO5_09950 PF04052 TolB amino-terminal domain VagVIO5_09960 PF00691 OmpA family VagVIO5_09970 PF13174 Tetratricopeptide repeat VagVIO5_09970 PF16331 TolA binding protein trimerisation VagVIO5_09980 PF02445 Quinolinate synthetase A protein VagVIO5_10000 PF03994 Domain of Unknown Function (DUF350) VagVIO5_10020 PF03738 Glutathionylspermidine synthase preATP-grasp VagVIO5_10040 PF09308 LuxQ, periplasmic VagVIO5_10040 PF00072 Response regulator receiver domain VagVIO5_10040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_10040 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_10050 PF06610 L-alanine exporter VagVIO5_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_10060 PF00672 HAMP domain VagVIO5_10070 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_10070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_10080 PF00873 AcrB/AcrD/AcrF family VagVIO5_10110 PF00579 tRNA synthetases class I (W and Y) VagVIO5_10130 PF03372 Endonuclease/Exonuclease/phosphatase family VagVIO5_10150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_10150 PF00672 HAMP domain VagVIO5_10150 PF12729 Four helix bundle sensory module for signal transduction VagVIO5_10160 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VagVIO5_10180 PF03466 LysR substrate binding domain VagVIO5_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_10200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VagVIO5_10200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VagVIO5_10210 PF01037 Lrp/AsnC ligand binding domain VagVIO5_10220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VagVIO5_10220 PF17854 FtsK alpha domain VagVIO5_10220 PF09397 Ftsk gamma domain VagVIO5_10220 PF01580 FtsK/SpoIIIE family VagVIO5_10230 PF03548 Outer membrane lipoprotein carrier protein LolA VagVIO5_10240 PF16193 AAA C-terminal domain VagVIO5_10240 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_10240 PF12002 MgsA AAA+ ATPase C terminal VagVIO5_10250 PF02403 Seryl-tRNA synthetase N-terminal domain VagVIO5_10250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VagVIO5_10280 PF00202 Aminotransferase class-III VagVIO5_10290 PF06968 Biotin and Thiamin Synthesis associated domain VagVIO5_10290 PF04055 Radical SAM superfamily VagVIO5_10300 PF00155 Aminotransferase class I and II VagVIO5_10310 PF12697 Alpha/beta hydrolase family VagVIO5_10310 PF08241 Methyltransferase domain VagVIO5_10340 PF01435 Peptidase family M48 VagVIO5_10370 PF00106 short chain dehydrogenase VagVIO5_10420 PF16036 Chalcone isomerase-like VagVIO5_10440 PF00206 Lyase VagVIO5_10440 PF08328 Adenylosuccinate lyase C-terminal VagVIO5_10450 PF04356 Protein of unknown function (DUF489) VagVIO5_10480 PF00294 pfkB family carbohydrate kinase VagVIO5_10490 PF00816 H-NS histone family VagVIO5_10500 PF03553 Na+/H+ antiporter family VagVIO5_10510 PF02954 Bacterial regulatory protein, Fis family VagVIO5_10510 PF00072 Response regulator receiver domain VagVIO5_10510 PF00158 Sigma-54 interaction domain VagVIO5_10520 PF01634 ATP phosphoribosyltransferase VagVIO5_10520 PF08029 HisG, C-terminal domain VagVIO5_10530 PF00815 Histidinol dehydrogenase VagVIO5_10540 PF00155 Aminotransferase class I and II VagVIO5_10550 PF00475 Imidazoleglycerol-phosphate dehydratase VagVIO5_10550 PF08645 Polynucleotide kinase 3 phosphatase VagVIO5_10560 PF00117 Glutamine amidotransferase class-I VagVIO5_10570 PF00977 Histidine biosynthesis protein VagVIO5_10580 PF00977 Histidine biosynthesis protein VagVIO5_10590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VagVIO5_10590 PF01502 Phosphoribosyl-AMP cyclohydrolase VagVIO5_10620 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_10620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_10630 PF03466 LysR substrate binding domain VagVIO5_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_10670 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_10670 PF00672 HAMP domain VagVIO5_10680 PF00072 Response regulator receiver domain VagVIO5_10680 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_10690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_10690 PF00672 HAMP domain VagVIO5_10720 PF08497 Radical SAM N-terminal VagVIO5_10720 PF04055 Radical SAM superfamily VagVIO5_10720 PF11842 Domain of unknown function (DUF3362) VagVIO5_10730 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_10730 PF08447 PAS fold VagVIO5_10730 PF00563 EAL domain VagVIO5_10730 PF08448 PAS fold VagVIO5_10760 PF03466 LysR substrate binding domain VagVIO5_10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_10770 PF08267 Cobalamin-independent synthase, N-terminal domain VagVIO5_10770 PF01717 Cobalamin-independent synthase, Catalytic domain VagVIO5_10790 PF03795 YCII-related domain VagVIO5_10800 PF03061 Thioesterase superfamily VagVIO5_10810 PF04279 Intracellular septation protein A VagVIO5_10830 PF00072 Response regulator receiver domain VagVIO5_10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_10840 PF17327 Acyl homoserine lactone synthase VagVIO5_10850 PF00375 Sodium:dicarboxylate symporter family VagVIO5_10860 PF00501 AMP-binding enzyme VagVIO5_10860 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_10870 PF00027 Cyclic nucleotide-binding domain VagVIO5_10870 PF13545 Crp-like helix-turn-helix domain VagVIO5_10880 PF00290 Tryptophan synthase alpha chain VagVIO5_10890 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_10900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VagVIO5_10900 PF00218 Indole-3-glycerol phosphate synthase VagVIO5_10910 PF02885 Glycosyl transferase family, helical bundle domain VagVIO5_10910 PF00591 Glycosyl transferase family, a/b domain VagVIO5_10920 PF00117 Glutamine amidotransferase class-I VagVIO5_10930 PF04715 Anthranilate synthase component I, N terminal region VagVIO5_10930 PF00425 chorismate binding enzyme VagVIO5_10940 PF08056 Tryptophan operon leader peptide VagVIO5_10950 PF02811 PHP domain VagVIO5_10960 PF01300 Telomere recombination VagVIO5_10990 PF01479 S4 domain VagVIO5_10990 PF00849 RNA pseudouridylate synthase VagVIO5_11000 PF04269 Protein of unknown function, DUF440 VagVIO5_11010 PF01132 Elongation factor P (EF-P) OB domain VagVIO5_11010 PF08207 Elongation factor P (EF-P) KOW-like domain VagVIO5_11010 PF09285 Elongation factor P, C-terminal VagVIO5_11030 PF00136 DNA polymerase family B VagVIO5_11030 PF03104 DNA polymerase family B, exonuclease domain VagVIO5_11040 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_11040 PF00072 Response regulator receiver domain VagVIO5_11050 PF08459 UvrC Helix-hairpin-helix N-terminal VagVIO5_11050 PF02151 UvrB/uvrC motif VagVIO5_11050 PF01541 GIY-YIG catalytic domain VagVIO5_11060 PF01066 CDP-alcohol phosphatidyltransferase VagVIO5_11070 PF00202 Aminotransferase class-III VagVIO5_11080 PF03435 Saccharopine dehydrogenase NADP binding domain VagVIO5_11080 PF16653 Saccharopine dehydrogenase C-terminal domain VagVIO5_11090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VagVIO5_11120 PF00994 Probable molybdopterin binding domain VagVIO5_11140 PF00268 Ribonucleotide reductase, small chain VagVIO5_11150 PF00317 Ribonucleotide reductase, all-alpha domain VagVIO5_11150 PF02867 Ribonucleotide reductase, barrel domain VagVIO5_11150 PF03477 ATP cone domain VagVIO5_11180 PF00521 DNA gyrase/topoisomerase IV, subunit A VagVIO5_11180 PF03989 DNA gyrase C-terminal domain, beta-propeller VagVIO5_11210 PF02335 Cytochrome c552 VagVIO5_11230 PF13247 4Fe-4S dicluster domain VagVIO5_11240 PF03916 Polysulphide reductase, NrfD VagVIO5_11250 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VagVIO5_11250 PF01578 Cytochrome C assembly protein VagVIO5_11260 PF08534 Redoxin VagVIO5_11270 PF03918 Cytochrome C biogenesis protein VagVIO5_11290 PF00925 GTP cyclohydrolase II VagVIO5_11340 PF03734 L,D-transpeptidase catalytic domain VagVIO5_11340 PF01471 Putative peptidoglycan binding domain VagVIO5_11350 PF05951 Bacterial protein of unknown function (DUF882) VagVIO5_11360 PF00753 Metallo-beta-lactamase superfamily VagVIO5_11390 PF03480 Bacterial extracellular solute-binding protein, family 7 VagVIO5_11410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VagVIO5_11420 PF07730 Histidine kinase VagVIO5_11420 PF17200 Single Cache domain 2 VagVIO5_11430 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_11430 PF00072 Response regulator receiver domain VagVIO5_11450 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_11460 PF00672 HAMP domain VagVIO5_11500 PF00155 Aminotransferase class I and II VagVIO5_11530 PF00155 Aminotransferase class I and II VagVIO5_11530 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_11550 PF00152 tRNA synthetases class II (D, K and N) VagVIO5_11550 PF01336 OB-fold nucleic acid binding domain VagVIO5_11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_11560 PF00672 HAMP domain VagVIO5_11560 PF17200 Single Cache domain 2 VagVIO5_11580 PF01242 6-pyruvoyl tetrahydropterin synthase VagVIO5_11600 PF04940 Sensors of blue-light using FAD VagVIO5_11600 PF00563 EAL domain VagVIO5_11610 PF03315 Serine dehydratase beta chain VagVIO5_11610 PF03313 Serine dehydratase alpha chain VagVIO5_11620 PF03222 Tryptophan/tyrosine permease family VagVIO5_11630 PF00293 NUDIX domain VagVIO5_11650 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_11650 PF00072 Response regulator receiver domain VagVIO5_11650 PF09308 LuxQ, periplasmic VagVIO5_11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_11660 PF04715 Anthranilate synthase component I, N terminal region VagVIO5_11660 PF00425 chorismate binding enzyme VagVIO5_11690 PF04317 YcjX-like family, DUF463 VagVIO5_11700 PF05128 Domain of unknown function (DUF697) VagVIO5_11710 PF18024 Helix-turn-helix domain VagVIO5_11710 PF00158 Sigma-54 interaction domain VagVIO5_11720 PF13302 Acetyltransferase (GNAT) domain VagVIO5_11750 PF00589 Phage integrase family VagVIO5_11750 PF13495 Phage integrase, N-terminal SAM-like domain VagVIO5_12150 PF00665 Integrase core domain VagVIO5_12160 PF01527 Transposase VagVIO5_12170 PF17243 POTRA domain TamA domain 1 VagVIO5_12170 PF07244 Surface antigen variable number repeat VagVIO5_12170 PF01103 Surface antigen VagVIO5_12180 PF13091 PLD-like domain VagVIO5_12190 PF00135 Carboxylesterase family VagVIO5_12240 PF13533 Biotin-lipoyl like VagVIO5_12260 PF02080 TrkA-C domain VagVIO5_12260 PF06826 Predicted Permease Membrane Region VagVIO5_12270 PF00155 Aminotransferase class I and II VagVIO5_12280 PF08543 Phosphomethylpyrimidine kinase VagVIO5_12310 PF03466 LysR substrate binding domain VagVIO5_12310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_12370 PF00580 UvrD/REP helicase N-terminal domain VagVIO5_12370 PF12462 DNA helicase IV / RNA helicase N terminal VagVIO5_12370 PF13361 UvrD-like helicase C-terminal domain VagVIO5_12380 PF00665 Integrase core domain VagVIO5_12400 PF13099 Domain of unknown function (DUF3944) VagVIO5_12400 PF03981 Ubiquinol-cytochrome C chaperone VagVIO5_12470 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system VagVIO5_12480 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA VagVIO5_12550 PF13533 Biotin-lipoyl like VagVIO5_12580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_12610 PF17203 Single cache domain 3 VagVIO5_12610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VagVIO5_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_12610 PF00989 PAS fold VagVIO5_12620 PF12431 Transcriptional regulator VagVIO5_12620 PF00072 Response regulator receiver domain VagVIO5_12630 PF00593 TonB dependent receptor VagVIO5_12630 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_12640 PF12833 Helix-turn-helix domain VagVIO5_12650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VagVIO5_12650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VagVIO5_12660 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VagVIO5_12670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VagVIO5_12670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VagVIO5_12700 PF00158 Sigma-54 interaction domain VagVIO5_12700 PF01590 GAF domain VagVIO5_12700 PF02954 Bacterial regulatory protein, Fis family VagVIO5_12710 PF00171 Aldehyde dehydrogenase family VagVIO5_12750 PF12833 Helix-turn-helix domain VagVIO5_12780 PF00263 Bacterial type II and III secretion system protein VagVIO5_12780 PF03958 Bacterial type II/III secretion system short domain VagVIO5_12790 PF16697 Inner membrane component of T3SS, cytoplasmic domain VagVIO5_12790 PF16693 Inner membrane component of T3SS, periplasmic domain VagVIO5_12810 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF VagVIO5_12820 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) VagVIO5_12840 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI VagVIO5_12850 PF01514 Secretory protein of YscJ/FliF family VagVIO5_12870 PF02108 Flagellar assembly protein FliH VagVIO5_12890 PF02661 Fic/DOC family VagVIO5_12970 PF13533 Biotin-lipoyl like VagVIO5_12990 PF08360 QacR-like protein, C-terminal region VagVIO5_12990 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_13000 PF01312 FlhB HrpN YscU SpaS Family VagVIO5_13010 PF01311 Bacterial export proteins, family 1 VagVIO5_13020 PF01313 Bacterial export proteins, family 3 VagVIO5_13030 PF00813 FliP family VagVIO5_13040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VagVIO5_13070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VagVIO5_13070 PF18269 T3SS EscN ATPase C-terminal domain VagVIO5_13070 PF02874 ATP synthase alpha/beta family, beta-barrel domain VagVIO5_13090 PF09059 TyeA VagVIO5_13130 PF00771 FHIPEP family VagVIO5_13140 PF09621 Type III secretion system regulator (LcrR) VagVIO5_13160 PF04792 V antigen (LcrV) protein VagVIO5_13170 PF07720 Tetratricopeptide repeat VagVIO5_13190 PF05844 YopD protein VagVIO5_13210 PF16868 NMT1-like family VagVIO5_13220 PF01925 Sulfite exporter TauE/SafE VagVIO5_13240 PF01970 Tripartite tricarboxylate transporter TctA family VagVIO5_13300 PF00285 Citrate synthase, C-terminal domain VagVIO5_13310 PF00330 Aconitase family (aconitate hydratase) VagVIO5_13310 PF00694 Aconitase C-terminal domain VagVIO5_13320 PF04303 PrpF protein VagVIO5_13330 PF00501 AMP-binding enzyme VagVIO5_13330 PF16177 Acetyl-coenzyme A synthetase N-terminus VagVIO5_13330 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_13350 PF00089 Trypsin VagVIO5_13380 PF04055 Radical SAM superfamily VagVIO5_13390 PF06508 Queuosine biosynthesis protein QueC VagVIO5_13400 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_13400 PF07694 5TMR of 5TMR-LYT VagVIO5_13420 PF05736 OprF membrane domain VagVIO5_13420 PF00691 OmpA family VagVIO5_13450 PF05736 OprF membrane domain VagVIO5_13450 PF00691 OmpA family VagVIO5_13480 PF10672 S-adenosylmethionine-dependent methyltransferase VagVIO5_13480 PF17785 PUA-like domain VagVIO5_13490 PF02743 Cache domain VagVIO5_13490 PF00672 HAMP domain VagVIO5_13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_13500 PF00708 Acylphosphatase VagVIO5_13510 PF04358 DsrC like protein VagVIO5_13530 PF01027 Inhibitor of apoptosis-promoting Bax1 VagVIO5_13540 PF00005 ABC transporter VagVIO5_13550 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_13560 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_13570 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_13580 PF14824 Sirohaem biosynthesis protein central VagVIO5_13580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VagVIO5_13580 PF10414 Sirohaem synthase dimerisation region VagVIO5_13590 PF04461 Protein of unknown function (DUF520) VagVIO5_13600 PF00793 DAHP synthetase I family VagVIO5_13640 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VagVIO5_13640 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VagVIO5_13640 PF01189 16S rRNA methyltransferase RsmB/F VagVIO5_13650 PF02470 MlaD protein VagVIO5_13660 PF04403 Paraquat-inducible protein A VagVIO5_13670 PF00664 ABC transporter transmembrane region VagVIO5_13670 PF00005 ABC transporter VagVIO5_13680 PF13185 GAF domain VagVIO5_13690 PF17516 ProQ C-terminal domain VagVIO5_13690 PF04352 ProQ/FINO family VagVIO5_13700 PF03572 Peptidase family S41 VagVIO5_13700 PF11818 C-terminal domain of tail specific protease (DUF3340) VagVIO5_13700 PF00595 PDZ domain VagVIO5_13700 PF17804 Tail specific protease N-terminal domain VagVIO5_13720 PF11940 Domain of unknown function (DUF3458) Ig-like fold VagVIO5_13720 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VagVIO5_13720 PF01433 Peptidase family M1 domain VagVIO5_13740 PF05088 Bacterial NAD-glutamate dehydrogenase VagVIO5_13750 PF01180 Dihydroorotate dehydrogenase VagVIO5_13760 PF07126 Cell-division protein ZapC VagVIO5_13770 PF02926 THUMP domain VagVIO5_13770 PF10672 S-adenosylmethionine-dependent methyltransferase VagVIO5_13770 PF01170 Putative RNA methylase family UPF0020 VagVIO5_13810 PF04957 Ribosome modulation factor VagVIO5_13820 PF07977 FabA-like domain VagVIO5_13830 PF05362 Lon protease (S16) C-terminal proteolytic domain VagVIO5_13830 PF13654 AAA domain VagVIO5_13840 PF06303 MatP N-terminal domain VagVIO5_13840 PF17414 MatP C-terminal ribbon-helix-helix domain VagVIO5_13900 PF05840 Bacteriophage replication gene A protein (GPA) VagVIO5_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_14110 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_14110 PF09308 LuxQ, periplasmic VagVIO5_14110 PF00072 Response regulator receiver domain VagVIO5_14140 PF00115 Cytochrome C and Quinol oxidase polypeptide I VagVIO5_14170 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VagVIO5_14170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VagVIO5_14190 PF00403 Heavy-metal-associated domain VagVIO5_14220 PF13545 Crp-like helix-turn-helix domain VagVIO5_14220 PF00027 Cyclic nucleotide-binding domain VagVIO5_14230 PF00582 Universal stress protein family VagVIO5_14240 PF01171 PP-loop family VagVIO5_14280 PF00005 ABC transporter VagVIO5_14280 PF08402 TOBE domain VagVIO5_14290 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_14300 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_14310 PF13416 Bacterial extracellular solute-binding protein VagVIO5_14320 PF13416 Bacterial extracellular solute-binding protein VagVIO5_14330 PF02146 Sir2 family VagVIO5_14350 PF00909 Ammonium Transporter Family VagVIO5_14400 PF13247 4Fe-4S dicluster domain VagVIO5_14410 PF01568 Molydopterin dinucleotide binding domain VagVIO5_14410 PF00384 Molybdopterin oxidoreductase VagVIO5_14410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VagVIO5_14430 PF02613 Nitrate reductase delta subunit VagVIO5_14470 PF02634 FdhD/NarQ family VagVIO5_14490 PF00005 ABC transporter VagVIO5_14490 PF12848 ABC transporter VagVIO5_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_14500 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_14510 PF00072 Response regulator receiver domain VagVIO5_14510 PF02954 Bacterial regulatory protein, Fis family VagVIO5_14510 PF00158 Sigma-54 interaction domain VagVIO5_14520 PF12849 PBP superfamily domain VagVIO5_14530 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_14540 PF08402 TOBE domain VagVIO5_14540 PF00005 ABC transporter VagVIO5_14550 PF12804 MobA-like NTP transferase domain VagVIO5_14560 PF00994 Probable molybdopterin binding domain VagVIO5_14560 PF03453 MoeA N-terminal region (domain I and II) VagVIO5_14560 PF03454 MoeA C-terminal region (domain IV) VagVIO5_14580 PF00480 ROK family VagVIO5_14640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_14640 PF00672 HAMP domain VagVIO5_14640 PF02743 Cache domain VagVIO5_14650 PF00877 NlpC/P60 family VagVIO5_14670 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_14670 PF05230 MASE2 domain VagVIO5_14680 PF01339 CheB methylesterase VagVIO5_14680 PF00072 Response regulator receiver domain VagVIO5_14690 PF03881 Fructosamine kinase VagVIO5_14710 PF00677 Lumazine binding domain VagVIO5_14720 PF01554 MatE VagVIO5_14740 PF01068 ATP dependent DNA ligase domain VagVIO5_14740 PF14743 DNA ligase OB-like domain VagVIO5_14750 PF01740 STAS domain VagVIO5_14770 PF02563 Polysaccharide biosynthesis/export protein VagVIO5_14770 PF10531 SLBB domain VagVIO5_14800 PF02954 Bacterial regulatory protein, Fis family VagVIO5_14800 PF00072 Response regulator receiver domain VagVIO5_14800 PF00158 Sigma-54 interaction domain VagVIO5_14810 PF13439 Glycosyltransferase Family 4 VagVIO5_14810 PF00534 Glycosyl transferases group 1 VagVIO5_14820 PF13439 Glycosyltransferase Family 4 VagVIO5_14820 PF00534 Glycosyl transferases group 1 VagVIO5_14880 PF00534 Glycosyl transferases group 1 VagVIO5_14880 PF13439 Glycosyltransferase Family 4 VagVIO5_14900 PF02397 Bacterial sugar transferase VagVIO5_14920 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_14950 PF00271 Helicase conserved C-terminal domain VagVIO5_14950 PF00270 DEAD/DEAH box helicase VagVIO5_14950 PF04408 Helicase associated domain (HA2) VagVIO5_14950 PF11898 Domain of unknown function (DUF3418) VagVIO5_14950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VagVIO5_14960 PF02525 Flavodoxin-like fold VagVIO5_15030 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_15050 PF00012 Hsp70 protein VagVIO5_15060 PF00012 Hsp70 protein VagVIO5_15100 PF07963 Prokaryotic N-terminal methylation motif VagVIO5_15100 PF14245 Type IV pilin PilA VagVIO5_15110 PF00005 ABC transporter VagVIO5_15110 PF00664 ABC transporter transmembrane region VagVIO5_15120 PF00005 ABC transporter VagVIO5_15120 PF00664 ABC transporter transmembrane region VagVIO5_15140 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_15140 PF00593 TonB dependent receptor VagVIO5_15150 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_15150 PF00593 TonB dependent receptor VagVIO5_15160 PF01032 FecCD transport family VagVIO5_15170 PF01497 Periplasmic binding protein VagVIO5_15180 PF00005 ABC transporter VagVIO5_15210 PF03222 Tryptophan/tyrosine permease family VagVIO5_15220 PF00465 Iron-containing alcohol dehydrogenase VagVIO5_15230 PF01966 HD domain VagVIO5_15250 PF03741 Integral membrane protein TerC family VagVIO5_15270 PF04055 Radical SAM superfamily VagVIO5_15280 PF11230 Protein of unknown function (DUF3029) VagVIO5_15290 PF01810 LysE type translocator VagVIO5_15300 PF01966 HD domain VagVIO5_15300 PF11871 Domain of unknown function (DUF3391) VagVIO5_15310 PF00563 EAL domain VagVIO5_15310 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_15310 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_15320 PF00158 Sigma-54 interaction domain VagVIO5_15320 PF00072 Response regulator receiver domain VagVIO5_15320 PF02954 Bacterial regulatory protein, Fis family VagVIO5_15330 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_15340 PF00939 Sodium:sulfate symporter transmembrane region VagVIO5_15380 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_15380 PF00072 Response regulator receiver domain VagVIO5_15390 PF03928 Haem-degrading VagVIO5_15400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VagVIO5_15400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VagVIO5_15440 PF13186 Iron-sulfur cluster-binding domain VagVIO5_15440 PF04055 Radical SAM superfamily VagVIO5_15450 PF03781 Sulfatase-modifying factor enzyme 1 VagVIO5_15480 PF00884 Sulfatase VagVIO5_15490 PF13840 ACT domain VagVIO5_15490 PF00696 Amino acid kinase family VagVIO5_15500 PF06339 Ectoine synthase VagVIO5_15510 PF00202 Aminotransferase class-III VagVIO5_15520 PF00583 Acetyltransferase (GNAT) family VagVIO5_15530 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_15560 PF00005 ABC transporter VagVIO5_15560 PF00571 CBS domain VagVIO5_15570 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_15580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VagVIO5_15600 PF00501 AMP-binding enzyme VagVIO5_15640 PF00072 Response regulator receiver domain VagVIO5_15640 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_15650 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_15650 PF08521 Two-component sensor kinase N-terminal VagVIO5_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_15660 PF00884 Sulfatase VagVIO5_15670 PF00665 Integrase core domain VagVIO5_15680 PF01527 Transposase VagVIO5_15740 PF01235 Sodium:alanine symporter family VagVIO5_15760 PF01810 LysE type translocator VagVIO5_15770 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VagVIO5_15820 PF13411 MerR HTH family regulatory protein VagVIO5_15840 PF03193 RsgA GTPase VagVIO5_15870 PF00717 Peptidase S24-like VagVIO5_15880 PF13438 Domain of unknown function (DUF4113) VagVIO5_15880 PF00817 impB/mucB/samB family VagVIO5_15880 PF11799 impB/mucB/samB family C-terminal domain VagVIO5_15880 PF11798 IMS family HHH motif VagVIO5_15890 PF01926 50S ribosome-binding GTPase VagVIO5_15890 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VagVIO5_15900 PF01926 50S ribosome-binding GTPase VagVIO5_15920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VagVIO5_15920 PF01926 50S ribosome-binding GTPase VagVIO5_15990 PF13742 OB-fold nucleic acid binding domain VagVIO5_15990 PF02601 Exonuclease VII, large subunit VagVIO5_16040 PF00005 ABC transporter VagVIO5_16080 PF00176 SNF2 family N-terminal domain VagVIO5_16080 PF00271 Helicase conserved C-terminal domain VagVIO5_16080 PF12419 SNF2 Helicase protein VagVIO5_16100 PF02223 Thymidylate kinase VagVIO5_16170 PF07508 Recombinase VagVIO5_16170 PF13408 Recombinase zinc beta ribbon domain VagVIO5_16170 PF00239 Resolvase, N terminal domain VagVIO5_16180 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VagVIO5_16190 PF03279 Bacterial lipid A biosynthesis acyltransferase VagVIO5_16210 PF13520 Amino acid permease VagVIO5_16220 PF00893 Small Multidrug Resistance protein VagVIO5_16240 PF04204 Homoserine O-succinyltransferase VagVIO5_16270 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_16270 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_16270 PF00563 EAL domain VagVIO5_16280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VagVIO5_16280 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_16280 PF00072 Response regulator receiver domain VagVIO5_16280 PF01627 Hpt domain VagVIO5_16280 PF00672 HAMP domain VagVIO5_16310 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_16310 PF12464 Maltose acetyltransferase VagVIO5_16340 PF04237 YjbR VagVIO5_16350 PF01047 MarR family VagVIO5_16370 PF12792 CSS motif domain associated with EAL VagVIO5_16370 PF00563 EAL domain VagVIO5_16420 PF02798 Glutathione S-transferase, N-terminal domain VagVIO5_16420 PF14497 Glutathione S-transferase, C-terminal domain VagVIO5_16440 PF04209 homogentisate 1,2-dioxygenase VagVIO5_16450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_16460 PF07687 Peptidase dimerisation domain VagVIO5_16460 PF01546 Peptidase family M20/M25/M40 VagVIO5_16470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_16480 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_16490 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_16490 PF12911 N-terminal TM domain of oligopeptide transport permease C VagVIO5_16500 PF00005 ABC transporter VagVIO5_16500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_16510 PF00005 ABC transporter VagVIO5_16510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_16530 PF08453 Peptidase family M9 N-terminal VagVIO5_16530 PF01752 Collagenase VagVIO5_16560 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_16570 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_16580 PF00005 ABC transporter VagVIO5_16580 PF08402 TOBE domain VagVIO5_16590 PF00701 Dihydrodipicolinate synthetase family VagVIO5_16600 PF02423 Ornithine cyclodeaminase/mu-crystallin family VagVIO5_16620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VagVIO5_16620 PF01266 FAD dependent oxidoreductase VagVIO5_16630 PF05544 Proline racemase VagVIO5_16640 PF00171 Aldehyde dehydrogenase family VagVIO5_16650 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_16690 PF05971 RNA methyltransferase VagVIO5_16700 PF01863 Protein of unknown function DUF45 VagVIO5_16720 PF03466 LysR substrate binding domain VagVIO5_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_16760 PF00005 ABC transporter VagVIO5_16770 PF01032 FecCD transport family VagVIO5_16780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VagVIO5_16810 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VagVIO5_16820 PF02654 Cobalamin-5-phosphate synthase VagVIO5_16830 PF02277 Phosphoribosyltransferase VagVIO5_16840 PF13460 NAD(P)H-binding VagVIO5_16860 PF08411 Exonuclease C-terminal VagVIO5_16860 PF00929 Exonuclease VagVIO5_16870 PF03788 LrgA family VagVIO5_16880 PF04172 LrgB-like family VagVIO5_16890 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VagVIO5_16890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VagVIO5_16900 PF02222 ATP-grasp domain VagVIO5_16910 PF05724 Thiopurine S-methyltransferase (TPMT) VagVIO5_16930 PF00216 Bacterial DNA-binding protein VagVIO5_16950 PF03484 tRNA synthetase B5 domain VagVIO5_16950 PF01588 Putative tRNA binding domain VagVIO5_16950 PF03483 B3/4 domain VagVIO5_16950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VagVIO5_16950 PF03147 Ferredoxin-fold anticodon binding domain VagVIO5_16960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VagVIO5_16960 PF01409 tRNA synthetases class II core domain (F) VagVIO5_17020 PF01906 Putative heavy-metal-binding VagVIO5_17030 PF00453 Ribosomal protein L20 VagVIO5_17040 PF01632 Ribosomal protein L35 VagVIO5_17050 PF00707 Translation initiation factor IF-3, C-terminal domain VagVIO5_17050 PF05198 Translation initiation factor IF-3, N-terminal domain VagVIO5_17060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VagVIO5_17060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VagVIO5_17060 PF03129 Anticodon binding domain VagVIO5_17060 PF02824 TGS domain VagVIO5_17090 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_17090 PF07702 UTRA domain VagVIO5_17100 PF01979 Amidohydrolase family VagVIO5_17110 PF00491 Arginase family VagVIO5_17120 PF01175 Urocanase Rossmann-like domain VagVIO5_17120 PF17392 Urocanase C-terminal domain VagVIO5_17120 PF17391 Urocanase N-terminal domain VagVIO5_17130 PF00221 Aromatic amino acid lyase VagVIO5_17150 PF04191 Phospholipid methyltransferase VagVIO5_17160 PF01565 FAD binding domain VagVIO5_17160 PF02913 FAD linked oxidases, C-terminal domain VagVIO5_17160 PF13183 4Fe-4S dicluster domain VagVIO5_17190 PF05736 OprF membrane domain VagVIO5_17190 PF00691 OmpA family VagVIO5_17230 PF01259 SAICAR synthetase VagVIO5_17240 PF09423 PhoD-like phosphatase VagVIO5_17240 PF16655 PhoD-like phosphatase, N-terminal domain VagVIO5_17260 PF08482 ATP-dependent helicase C-terminal VagVIO5_17260 PF00270 DEAD/DEAH box helicase VagVIO5_17260 PF00271 Helicase conserved C-terminal domain VagVIO5_17260 PF04408 Helicase associated domain (HA2) VagVIO5_17270 PF00390 Malic enzyme, N-terminal domain VagVIO5_17270 PF03949 Malic enzyme, NAD binding domain VagVIO5_17280 PF02698 DUF218 domain VagVIO5_17290 PF00939 Sodium:sulfate symporter transmembrane region VagVIO5_17300 PF00939 Sodium:sulfate symporter transmembrane region VagVIO5_17320 PF00072 Response regulator receiver domain VagVIO5_17320 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_17340 PF00266 Aminotransferase class-V VagVIO5_17360 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_17370 PF00005 ABC transporter VagVIO5_17370 PF00664 ABC transporter transmembrane region VagVIO5_17380 PF00005 ABC transporter VagVIO5_17380 PF00664 ABC transporter transmembrane region VagVIO5_17400 PF00691 OmpA family VagVIO5_17430 PF13954 PapC N-terminal domain VagVIO5_17430 PF00577 Outer membrane usher protein VagVIO5_17430 PF13953 PapC C-terminal domain VagVIO5_17440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VagVIO5_17440 PF02753 Pili assembly chaperone PapD, C-terminal domain VagVIO5_17450 PF00419 Fimbrial protein VagVIO5_17460 PF00266 Aminotransferase class-V VagVIO5_17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_17480 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_17480 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_17520 PF04993 TfoX N-terminal domain VagVIO5_17520 PF04994 TfoX C-terminal domain VagVIO5_17540 PF03956 Lysine exporter LysO VagVIO5_17560 PF00282 Pyridoxal-dependent decarboxylase conserved domain VagVIO5_17570 PF01380 SIS domain VagVIO5_17570 PF01418 Helix-turn-helix domain, rpiR family VagVIO5_17580 PF00465 Iron-containing alcohol dehydrogenase VagVIO5_17590 PF00462 Glutaredoxin VagVIO5_17600 PF06826 Predicted Permease Membrane Region VagVIO5_17600 PF02080 TrkA-C domain VagVIO5_17610 PF12241 Trans-2-enoyl-CoA reductase catalytic region VagVIO5_17610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VagVIO5_17610 PF07055 Enoyl reductase FAD binding domain VagVIO5_17620 PF02770 Acyl-CoA dehydrogenase, middle domain VagVIO5_17620 PF09317 Domain of unknown function (DUF1974) VagVIO5_17620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VagVIO5_17620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VagVIO5_17630 PF16295 Tetracyclin repressor-like, C-terminal domain VagVIO5_17630 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_17640 PF06965 Na+/H+ antiporter 1 VagVIO5_17670 PF00005 ABC transporter VagVIO5_17680 PF01554 MatE VagVIO5_17690 PF11066 Protein of unknown function (DUF2867) VagVIO5_17690 PF13460 NAD(P)H-binding VagVIO5_17700 PF03264 NapC/NirT cytochrome c family, N-terminal region VagVIO5_17730 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VagVIO5_17760 PF07690 Major Facilitator Superfamily VagVIO5_17770 PF00849 RNA pseudouridylate synthase VagVIO5_17770 PF01479 S4 domain VagVIO5_17780 PF04851 Type III restriction enzyme, res subunit VagVIO5_17780 PF00271 Helicase conserved C-terminal domain VagVIO5_17800 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_17800 PF00072 Response regulator receiver domain VagVIO5_17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_17810 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_17810 PF00672 HAMP domain VagVIO5_17820 PF01386 Ribosomal L25p family VagVIO5_17830 PF00583 Acetyltransferase (GNAT) family VagVIO5_17840 PF00149 Calcineurin-like phosphoesterase VagVIO5_17840 PF02872 5'-nucleotidase, C-terminal domain VagVIO5_17870 PF13416 Bacterial extracellular solute-binding protein VagVIO5_17880 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_17890 PF00005 ABC transporter VagVIO5_17900 PF01066 CDP-alcohol phosphatidyltransferase VagVIO5_17920 PF00158 Sigma-54 interaction domain VagVIO5_17920 PF01590 GAF domain VagVIO5_17930 PF03063 Prismane/CO dehydrogenase family VagVIO5_17940 PF00970 Oxidoreductase FAD-binding domain VagVIO5_17940 PF00111 2Fe-2S iron-sulfur cluster binding domain VagVIO5_17940 PF00175 Oxidoreductase NAD-binding domain VagVIO5_17960 PF00849 RNA pseudouridylate synthase VagVIO5_17970 PF00209 Sodium:neurotransmitter symporter family VagVIO5_17980 PF00209 Sodium:neurotransmitter symporter family VagVIO5_17990 PF13396 Phospholipase_D-nuclease N-terminal VagVIO5_17990 PF13091 PLD-like domain VagVIO5_18000 PF01053 Cys/Met metabolism PLP-dependent enzyme VagVIO5_18010 PF00561 alpha/beta hydrolase fold VagVIO5_18020 PF03280 Proteobacterial lipase chaperone protein VagVIO5_18030 PF03352 Methyladenine glycosylase VagVIO5_18040 PF00873 AcrB/AcrD/AcrF family VagVIO5_18050 PF13533 Biotin-lipoyl like VagVIO5_18070 PF04024 PspC domain VagVIO5_18080 PF06667 Phage shock protein B VagVIO5_18090 PF04012 PspA/IM30 family VagVIO5_18100 PF02954 Bacterial regulatory protein, Fis family VagVIO5_18100 PF00158 Sigma-54 interaction domain VagVIO5_18110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_18120 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_18130 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_18130 PF12911 N-terminal TM domain of oligopeptide transport permease C VagVIO5_18140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_18140 PF00005 ABC transporter VagVIO5_18150 PF00005 ABC transporter VagVIO5_18170 PF02833 DHHA2 domain VagVIO5_18170 PF01368 DHH family VagVIO5_18190 PF16874 Glycosyl hydrolase family 36 C-terminal domain VagVIO5_18190 PF16875 Glycosyl hydrolase family 36 N-terminal domain VagVIO5_18200 PF00384 Molybdopterin oxidoreductase VagVIO5_18200 PF18364 Molybdopterin oxidoreductase N-terminal domain VagVIO5_18200 PF01568 Molydopterin dinucleotide binding domain VagVIO5_18210 PF03264 NapC/NirT cytochrome c family, N-terminal region VagVIO5_18220 PF06796 Periplasmic nitrate reductase protein NapE VagVIO5_18230 PF03649 Uncharacterised protein family (UPF0014) VagVIO5_18250 PF01226 Formate/nitrite transporter VagVIO5_18300 PF02698 DUF218 domain VagVIO5_18310 PF00265 Thymidine kinase VagVIO5_18320 PF09190 DALR domain VagVIO5_18320 PF01406 tRNA synthetases class I (C) catalytic domain VagVIO5_18330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VagVIO5_18340 PF00149 Calcineurin-like phosphoesterase VagVIO5_18350 PF08668 HDOD domain VagVIO5_18350 PF00563 EAL domain VagVIO5_18360 PF02810 SEC-C motif VagVIO5_18380 PF08267 Cobalamin-independent synthase, N-terminal domain VagVIO5_18380 PF01717 Cobalamin-independent synthase, Catalytic domain VagVIO5_18420 PF12704 MacB-like periplasmic core domain VagVIO5_18420 PF00005 ABC transporter VagVIO5_18420 PF02687 FtsX-like permease family VagVIO5_18430 PF00005 ABC transporter VagVIO5_18430 PF02687 FtsX-like permease family VagVIO5_18430 PF12704 MacB-like periplasmic core domain VagVIO5_18440 PF02687 FtsX-like permease family VagVIO5_18440 PF12704 MacB-like periplasmic core domain VagVIO5_18440 PF00005 ABC transporter VagVIO5_18460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_18490 PF05958 tRNA (Uracil-5-)-methyltransferase VagVIO5_18490 PF01938 TRAM domain VagVIO5_18510 PF00085 Thioredoxin VagVIO5_18520 PF11412 Disulphide bond corrector protein DsbC VagVIO5_18520 PF02683 Cytochrome C biogenesis protein transmembrane region VagVIO5_18540 PF00072 Response regulator receiver domain VagVIO5_18540 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_18550 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_18560 PF13247 4Fe-4S dicluster domain VagVIO5_18570 PF03916 Polysulphide reductase, NrfD VagVIO5_18580 PF00384 Molybdopterin oxidoreductase VagVIO5_18580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VagVIO5_18580 PF01568 Molydopterin dinucleotide binding domain VagVIO5_18590 PF00034 Cytochrome c VagVIO5_18600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VagVIO5_18610 PF04403 Paraquat-inducible protein A VagVIO5_18620 PF02470 MlaD protein VagVIO5_18650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_18660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VagVIO5_18670 PF18073 Rubredoxin metal binding domain VagVIO5_18680 PF06305 Lipopolysaccharide assembly protein A domain VagVIO5_18690 PF00216 Bacterial DNA-binding protein VagVIO5_18700 PF00575 S1 RNA binding domain VagVIO5_18710 PF02224 Cytidylate kinase VagVIO5_18720 PF01343 Peptidase family S49 VagVIO5_18720 PF08496 Peptidase family S49 N-terminal VagVIO5_18730 PF00106 short chain dehydrogenase VagVIO5_18760 PF07733 Bacterial DNA polymerase III alpha NTPase domain VagVIO5_18760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VagVIO5_18760 PF01336 OB-fold nucleic acid binding domain VagVIO5_18760 PF02811 PHP domain VagVIO5_18760 PF14579 Helix-hairpin-helix motif VagVIO5_18770 PF00072 Response regulator receiver domain VagVIO5_18770 PF01584 CheW-like domain VagVIO5_18780 PF00480 ROK family VagVIO5_18790 PF00224 Pyruvate kinase, barrel domain VagVIO5_18790 PF02887 Pyruvate kinase, alpha/beta domain VagVIO5_18800 PF01734 Patatin-like phospholipase VagVIO5_18830 PF00209 Sodium:neurotransmitter symporter family VagVIO5_18860 PF00367 phosphotransferase system, EIIB VagVIO5_18860 PF02378 Phosphotransferase system, EIIC VagVIO5_18870 PF01026 TatD related DNase VagVIO5_18880 PF09115 DNA polymerase III, delta subunit, C terminal VagVIO5_18890 PF02223 Thymidylate kinase VagVIO5_18900 PF02618 YceG-like family VagVIO5_18910 PF01063 Amino-transferase class IV VagVIO5_18920 PF02801 Beta-ketoacyl synthase, C-terminal domain VagVIO5_18920 PF00109 Beta-ketoacyl synthase, N-terminal domain VagVIO5_18930 PF00550 Phosphopantetheine attachment site VagVIO5_18950 PF00698 Acyl transferase domain VagVIO5_18960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VagVIO5_18960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VagVIO5_18970 PF02504 Fatty acid synthesis protein VagVIO5_18980 PF01783 Ribosomal L32p protein family VagVIO5_18990 PF02620 Large ribosomal RNA subunit accumulation protein YceD VagVIO5_19000 PF02545 Maf-like protein VagVIO5_19010 PF00849 RNA pseudouridylate synthase VagVIO5_19010 PF01479 S4 domain VagVIO5_19020 PF00575 S1 RNA binding domain VagVIO5_19020 PF10150 Ribonuclease E/G family VagVIO5_19020 PF12111 Polyribonucleotide phosphorylase C terminal VagVIO5_19030 PF00916 Sulfate permease family VagVIO5_19030 PF01740 STAS domain VagVIO5_19040 PF01451 Low molecular weight phosphotyrosine protein phosphatase VagVIO5_19050 PF12557 Cob(I)alamin adenosyltransferase N terminal VagVIO5_19050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VagVIO5_19070 PF00485 Phosphoribulokinase / Uridine kinase family VagVIO5_19080 PF10609 NUBPL iron-transfer P-loop NTPase VagVIO5_19090 PF09334 tRNA synthetases class I (M) VagVIO5_19090 PF01588 Putative tRNA binding domain VagVIO5_19120 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_19120 PF07840 FadR C-terminal domain VagVIO5_19130 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VagVIO5_19140 PF02600 Disulfide bond formation protein DsbB VagVIO5_19150 PF01043 SecA preprotein cross-linking domain VagVIO5_19150 PF07516 SecA Wing and Scaffold domain VagVIO5_19150 PF02810 SEC-C motif VagVIO5_19150 PF07517 SecA DEAD-like domain VagVIO5_19160 PF01207 Dihydrouridine synthase (Dus) VagVIO5_19170 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_19170 PF17158 Membrane-associated sensor, integral membrane domain VagVIO5_19180 PF00128 Alpha amylase, catalytic domain VagVIO5_19180 PF02903 Alpha amylase, N-terminal ig-like domain VagVIO5_19190 PF00005 ABC transporter VagVIO5_19200 PF02653 Branched-chain amino acid transport system / permease component VagVIO5_19220 PF04217 Protein of unknown function, DUF412 VagVIO5_19230 PF00871 Acetokinase family VagVIO5_19240 PF07085 DRTGG domain VagVIO5_19240 PF01515 Phosphate acetyl/butaryl transferase VagVIO5_19250 PF13194 Domain of unknown function (DUF4010) VagVIO5_19270 PF13409 Glutathione S-transferase, N-terminal domain VagVIO5_19280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_19280 PF00005 ABC transporter VagVIO5_19290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_19290 PF00005 ABC transporter VagVIO5_19300 PF12911 N-terminal TM domain of oligopeptide transport permease C VagVIO5_19300 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_19310 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_19320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_19330 PF02391 MoaE protein VagVIO5_19340 PF02597 ThiS family VagVIO5_19350 PF01967 MoaC family VagVIO5_19360 PF00994 Probable molybdopterin binding domain VagVIO5_19370 PF04055 Radical SAM superfamily VagVIO5_19370 PF06463 Molybdenum Cofactor Synthesis C VagVIO5_19380 PF01933 Uncharacterised protein family UPF0052 VagVIO5_19390 PF01627 Hpt domain VagVIO5_19400 PF00158 Sigma-54 interaction domain VagVIO5_19400 PF02954 Bacterial regulatory protein, Fis family VagVIO5_19400 PF00072 Response regulator receiver domain VagVIO5_19410 PF04851 Type III restriction enzyme, res subunit VagVIO5_19410 PF02151 UvrB/uvrC motif VagVIO5_19410 PF00271 Helicase conserved C-terminal domain VagVIO5_19410 PF12344 Ultra-violet resistance protein B VagVIO5_19410 PF17757 UvrB interaction domain VagVIO5_19420 PF02508 Rnf-Nqr subunit, membrane protein VagVIO5_19430 PF04060 Putative Fe-S cluster VagVIO5_19440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VagVIO5_19440 PF12838 4Fe-4S dicluster domain VagVIO5_19440 PF13375 RnfC Barrel sandwich hybrid domain VagVIO5_19440 PF10531 SLBB domain VagVIO5_19450 PF03116 NQR2, RnfD, RnfE family VagVIO5_19460 PF04205 FMN-binding domain VagVIO5_19470 PF02508 Rnf-Nqr subunit, membrane protein VagVIO5_19480 PF10576 Iron-sulfur binding domain of endonuclease III VagVIO5_19480 PF00633 Helix-hairpin-helix motif VagVIO5_19480 PF00730 HhH-GPD superfamily base excision DNA repair protein VagVIO5_19490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_19500 PF10952 Protein of unknown function (DUF2753) VagVIO5_19510 PF00691 OmpA family VagVIO5_19510 PF18393 MotY N-terminal domain VagVIO5_19530 PF00929 Exonuclease VagVIO5_19540 PF03553 Na+/H+ antiporter family VagVIO5_19540 PF13726 Na+-H+ antiporter family VagVIO5_19560 PF00462 Glutaredoxin VagVIO5_19570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VagVIO5_19570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VagVIO5_19600 PF00171 Aldehyde dehydrogenase family VagVIO5_19600 PF00465 Iron-containing alcohol dehydrogenase VagVIO5_19610 PF01914 MarC family integral membrane protein VagVIO5_19620 PF00520 Ion transport protein VagVIO5_19620 PF00027 Cyclic nucleotide-binding domain VagVIO5_19630 PF02774 Semialdehyde dehydrogenase, dimerisation domain VagVIO5_19630 PF01118 Semialdehyde dehydrogenase, NAD binding domain VagVIO5_19640 PF03553 Na+/H+ antiporter family VagVIO5_19670 PF04245 37-kD nucleoid-associated bacterial protein VagVIO5_19680 PF07208 Protein of unknown function (DUF1414) VagVIO5_19690 PF00884 Sulfatase VagVIO5_19690 PF11893 Domain of unknown function (DUF3413) VagVIO5_19700 PF00850 Histone deacetylase domain VagVIO5_19710 PF00106 short chain dehydrogenase VagVIO5_19730 PF01131 DNA topoisomerase VagVIO5_19730 PF01751 Toprim domain VagVIO5_19740 PF00881 Nitroreductase family VagVIO5_19760 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_19760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VagVIO5_19770 PF01343 Peptidase family S49 VagVIO5_19780 PF00710 Asparaginase, N-terminal VagVIO5_19780 PF17763 Glutaminase/Asparaginase C-terminal domain VagVIO5_19790 PF07023 Protein of unknown function (DUF1315) VagVIO5_19810 PF01641 SelR domain VagVIO5_19820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VagVIO5_19820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VagVIO5_19830 PF01263 Aldose 1-epimerase VagVIO5_19840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_19840 PF00672 HAMP domain VagVIO5_19840 PF02743 Cache domain VagVIO5_19850 PF13847 Methyltransferase domain VagVIO5_19880 PF00245 Alkaline phosphatase VagVIO5_19900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_19910 PF03992 Antibiotic biosynthesis monooxygenase VagVIO5_19920 PF00924 Mechanosensitive ion channel VagVIO5_19920 PF05552 Conserved TM helix VagVIO5_19930 PF03692 Putative zinc- or iron-chelating domain VagVIO5_19940 PF04226 Transglycosylase associated protein VagVIO5_19950 PF03692 Putative zinc- or iron-chelating domain VagVIO5_19970 PF03313 Serine dehydratase alpha chain VagVIO5_19980 PF01042 Endoribonuclease L-PSP VagVIO5_20000 PF00230 Major intrinsic protein VagVIO5_20010 PF13662 Toprim domain VagVIO5_20010 PF02132 RecR protein VagVIO5_20020 PF02575 YbaB/EbfC DNA-binding family VagVIO5_20030 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VagVIO5_20030 PF12169 DNA polymerase III subunits gamma and tau domain III VagVIO5_20030 PF12170 DNA polymerase III tau subunit V interacting with alpha VagVIO5_20040 PF00156 Phosphoribosyl transferase domain VagVIO5_20050 PF04304 Protein of unknown function (DUF454) VagVIO5_20070 PF00072 Response regulator receiver domain VagVIO5_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_20080 PF03466 LysR substrate binding domain VagVIO5_20090 PF00156 Phosphoribosyl transferase domain VagVIO5_20100 PF02674 Colicin V production protein VagVIO5_20110 PF05036 Sporulation related domain VagVIO5_20120 PF02875 Mur ligase family, glutamate ligase domain VagVIO5_20120 PF08245 Mur ligase middle domain VagVIO5_20130 PF17848 Acetyl-coA carboxylase zinc finger domain VagVIO5_20130 PF01039 Carboxyl transferase domain VagVIO5_20140 PF01416 tRNA pseudouridine synthase VagVIO5_20160 PF02774 Semialdehyde dehydrogenase, dimerisation domain VagVIO5_20160 PF01118 Semialdehyde dehydrogenase, NAD binding domain VagVIO5_20170 PF11890 Domain of unknown function (DUF3410) VagVIO5_20170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VagVIO5_20170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VagVIO5_20180 PF02801 Beta-ketoacyl synthase, C-terminal domain VagVIO5_20180 PF00109 Beta-ketoacyl synthase, N-terminal domain VagVIO5_20190 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VagVIO5_20190 PF01266 FAD dependent oxidoreductase VagVIO5_20200 PF03358 NADPH-dependent FMN reductase VagVIO5_20210 PF08891 YfcL protein VagVIO5_20220 PF04315 Elongation factor P hydroxylase VagVIO5_20230 PF03458 UPF0126 domain VagVIO5_20240 PF01264 Chorismate synthase VagVIO5_20250 PF05175 Methyltransferase small domain VagVIO5_20260 PF01713 Smr domain VagVIO5_20270 PF00300 Histidine phosphatase superfamily (branch 1) VagVIO5_20280 PF05193 Peptidase M16 inactive domain VagVIO5_20280 PF00675 Insulinase (Peptidase family M16) VagVIO5_20280 PF16187 Middle or third domain of peptidase_M16 VagVIO5_20300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VagVIO5_20300 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_20300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VagVIO5_20310 PF02803 Thiolase, C-terminal domain VagVIO5_20310 PF00108 Thiolase, N-terminal domain VagVIO5_20320 PF04542 Sigma-70 region 2 VagVIO5_20320 PF08281 Sigma-70, region 4 VagVIO5_20340 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VagVIO5_20350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VagVIO5_20360 PF04333 MlaA lipoprotein VagVIO5_20370 PF03918 Cytochrome C biogenesis protein VagVIO5_20380 PF03918 Cytochrome C biogenesis protein VagVIO5_20390 PF08534 Redoxin VagVIO5_20400 PF01578 Cytochrome C assembly protein VagVIO5_20400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VagVIO5_20410 PF03100 CcmE VagVIO5_20420 PF04995 Heme exporter protein D (CcmD) VagVIO5_20430 PF01578 Cytochrome C assembly protein VagVIO5_20440 PF03379 CcmB protein VagVIO5_20450 PF00005 ABC transporter VagVIO5_20470 PF01584 CheW-like domain VagVIO5_20490 PF13614 AAA domain VagVIO5_20500 PF00072 Response regulator receiver domain VagVIO5_20500 PF01339 CheB methylesterase VagVIO5_20510 PF02895 Signal transducing histidine kinase, homodimeric domain VagVIO5_20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_20510 PF01584 CheW-like domain VagVIO5_20510 PF00072 Response regulator receiver domain VagVIO5_20510 PF01627 Hpt domain VagVIO5_20520 PF04344 Chemotaxis phosphatase, CheZ VagVIO5_20530 PF00072 Response regulator receiver domain VagVIO5_20540 PF04542 Sigma-70 region 2 VagVIO5_20540 PF04539 Sigma-70 region 3 VagVIO5_20540 PF04545 Sigma-70, region 4 VagVIO5_20550 PF10609 NUBPL iron-transfer P-loop NTPase VagVIO5_20560 PF00448 SRP54-type protein, GTPase domain VagVIO5_20570 PF00771 FHIPEP family VagVIO5_20580 PF01312 FlhB HrpN YscU SpaS Family VagVIO5_20590 PF01311 Bacterial export proteins, family 1 VagVIO5_20600 PF01313 Bacterial export proteins, family 3 VagVIO5_20610 PF00813 FliP family VagVIO5_20620 PF04347 Flagellar biosynthesis protein, FliO VagVIO5_20630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VagVIO5_20640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VagVIO5_20640 PF02154 Flagellar motor switch protein FliM VagVIO5_20680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VagVIO5_20680 PF18269 T3SS EscN ATPase C-terminal domain VagVIO5_20700 PF14842 FliG N-terminal domain VagVIO5_20700 PF01706 FliG C-terminal domain VagVIO5_20700 PF14841 FliG middle domain VagVIO5_20710 PF01514 Secretory protein of YscJ/FliF family VagVIO5_20710 PF08345 Flagellar M-ring protein C-terminal VagVIO5_20720 PF02049 Flagellar hook-basal body complex protein FliE VagVIO5_20730 PF00158 Sigma-54 interaction domain VagVIO5_20730 PF00072 Response regulator receiver domain VagVIO5_20730 PF02954 Bacterial regulatory protein, Fis family VagVIO5_20740 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_20750 PF06490 Flagellar regulatory protein FleQ VagVIO5_20750 PF02954 Bacterial regulatory protein, Fis family VagVIO5_20750 PF00158 Sigma-54 interaction domain VagVIO5_20760 PF02561 Flagellar protein FliS VagVIO5_20780 PF07196 Flagellin hook IN motif VagVIO5_20780 PF07195 Flagellar hook-associated protein 2 C-terminus VagVIO5_20780 PF02465 Flagellar hook-associated protein 2 N-terminus VagVIO5_20790 PF03646 FlaG protein VagVIO5_20800 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_20800 PF07196 Flagellin hook IN motif VagVIO5_20800 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_20810 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_20810 PF07196 Flagellin hook IN motif VagVIO5_20810 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_20820 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_20820 PF07196 Flagellin hook IN motif VagVIO5_20820 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_20830 PF04261 Dyp-type peroxidase family VagVIO5_20840 PF11143 Protein of unknown function (DUF2919) VagVIO5_20880 PF03960 ArsC family VagVIO5_20890 PF07687 Peptidase dimerisation domain VagVIO5_20890 PF01546 Peptidase family M20/M25/M40 VagVIO5_20930 PF00701 Dihydrodipicolinate synthetase family VagVIO5_20950 PF00578 AhpC/TSA family VagVIO5_20960 PF01594 AI-2E family transporter VagVIO5_20980 PF01435 Peptidase family M48 VagVIO5_20980 PF13181 Tetratricopeptide repeat VagVIO5_20990 PF03960 ArsC family VagVIO5_21000 PF03358 NADPH-dependent FMN reductase VagVIO5_21030 PF00860 Permease family VagVIO5_21050 PF00586 AIR synthase related protein, N-terminal domain VagVIO5_21050 PF02769 AIR synthase related protein, C-terminal domain VagVIO5_21060 PF00551 Formyl transferase VagVIO5_21070 PF13230 Glutamine amidotransferases class-II VagVIO5_21080 PF13580 SIS domain VagVIO5_21090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VagVIO5_21090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VagVIO5_21090 PF02770 Acyl-CoA dehydrogenase, middle domain VagVIO5_21090 PF09317 Domain of unknown function (DUF1974) VagVIO5_21100 PF00916 Sulfate permease family VagVIO5_21100 PF01740 STAS domain VagVIO5_21150 PF00929 Exonuclease VagVIO5_21160 PF00075 RNase H VagVIO5_21170 PF08241 Methyltransferase domain VagVIO5_21180 PF00753 Metallo-beta-lactamase superfamily VagVIO5_21180 PF16123 Hydroxyacylglutathione hydrolase C-terminus VagVIO5_21190 PF01464 Transglycosylase SLT domain VagVIO5_21190 PF01476 LysM domain VagVIO5_21210 PF03372 Endonuclease/Exonuclease/phosphatase family VagVIO5_21220 PF00543 Nitrogen regulatory protein P-II VagVIO5_21230 PF00034 Cytochrome c VagVIO5_21240 PF11734 TilS substrate C-terminal domain VagVIO5_21240 PF09179 TilS substrate binding domain VagVIO5_21240 PF01171 PP-loop family VagVIO5_21250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VagVIO5_21260 PF14579 Helix-hairpin-helix motif VagVIO5_21260 PF01336 OB-fold nucleic acid binding domain VagVIO5_21260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VagVIO5_21260 PF02811 PHP domain VagVIO5_21260 PF07733 Bacterial DNA polymerase III alpha NTPase domain VagVIO5_21270 PF01351 Ribonuclease HII VagVIO5_21280 PF02684 Lipid-A-disaccharide synthetase VagVIO5_21290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VagVIO5_21290 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_21300 PF07977 FabA-like domain VagVIO5_21310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VagVIO5_21310 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_21320 PF03938 Outer membrane protein (OmpH-like) VagVIO5_21330 PF01103 Surface antigen VagVIO5_21330 PF07244 Surface antigen variable number repeat VagVIO5_21340 PF02163 Peptidase family M50 VagVIO5_21340 PF17820 PDZ domain VagVIO5_21350 PF13288 DXP reductoisomerase C-terminal domain VagVIO5_21350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VagVIO5_21350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VagVIO5_21370 PF01255 Putative undecaprenyl diphosphate synthase VagVIO5_21380 PF01765 Ribosome recycling factor VagVIO5_21390 PF00696 Amino acid kinase family VagVIO5_21400 PF00889 Elongation factor TS VagVIO5_21410 PF00318 Ribosomal protein S2 VagVIO5_21420 PF00557 Metallopeptidase family M24 VagVIO5_21430 PF01966 HD domain VagVIO5_21430 PF08335 GlnD PII-uridylyltransferase VagVIO5_21430 PF01842 ACT domain VagVIO5_21430 PF01909 Nucleotidyltransferase domain VagVIO5_21440 PF11944 Protein of unknown function (DUF3461) VagVIO5_21450 PF00849 RNA pseudouridylate synthase VagVIO5_21460 PF00849 RNA pseudouridylate synthase VagVIO5_21460 PF04287 tRNA pseudouridine synthase C VagVIO5_21510 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VagVIO5_21520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VagVIO5_21520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VagVIO5_21530 PF01370 NAD dependent epimerase/dehydratase family VagVIO5_21580 PF03806 AbgT putative transporter family VagVIO5_21590 PF01197 Ribosomal protein L31 VagVIO5_21600 PF18389 TrmO C-terminal domain VagVIO5_21600 PF01980 tRNA-methyltransferase O VagVIO5_21610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VagVIO5_21610 PF04073 Aminoacyl-tRNA editing domain VagVIO5_21610 PF03129 Anticodon binding domain VagVIO5_21630 PF06786 Uncharacterised protein family (UPF0253) VagVIO5_21650 PF00209 Sodium:neurotransmitter symporter family VagVIO5_21660 PF00704 Glycosyl hydrolases family 18 VagVIO5_21660 PF00041 Fibronectin type III domain VagVIO5_21660 PF02018 Carbohydrate binding domain VagVIO5_21680 PF01272 Transcription elongation factor, GreA/GreB, C-term VagVIO5_21680 PF03449 Transcription elongation factor, N-terminal VagVIO5_21690 PF16124 RecQ zinc-binding VagVIO5_21690 PF00570 HRDC domain VagVIO5_21690 PF00271 Helicase conserved C-terminal domain VagVIO5_21690 PF00270 DEAD/DEAH box helicase VagVIO5_21690 PF09382 RQC domain VagVIO5_21700 PF11798 IMS family HHH motif VagVIO5_21700 PF11799 impB/mucB/samB family C-terminal domain VagVIO5_21700 PF00817 impB/mucB/samB family VagVIO5_21730 PF02424 ApbE family VagVIO5_21740 PF00175 Oxidoreductase NAD-binding domain VagVIO5_21740 PF00111 2Fe-2S iron-sulfur cluster binding domain VagVIO5_21740 PF00970 Oxidoreductase FAD-binding domain VagVIO5_21750 PF02508 Rnf-Nqr subunit, membrane protein VagVIO5_21760 PF02508 Rnf-Nqr subunit, membrane protein VagVIO5_21770 PF04205 FMN-binding domain VagVIO5_21780 PF03116 NQR2, RnfD, RnfE family VagVIO5_21790 PF11973 NQRA C-terminal domain VagVIO5_21790 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VagVIO5_21800 PF01722 BolA-like protein VagVIO5_21810 PF05175 Methyltransferase small domain VagVIO5_21820 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VagVIO5_21820 PF03923 Uncharacterized lipoprotein VagVIO5_21830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VagVIO5_21840 PF07690 Major Facilitator Superfamily VagVIO5_21860 PF04542 Sigma-70 region 2 VagVIO5_21860 PF04545 Sigma-70, region 4 VagVIO5_21890 PF03502 Nucleoside-specific channel-forming protein, Tsx VagVIO5_21900 PF08546 Ketopantoate reductase PanE/ApbA C terminal VagVIO5_21900 PF02558 Ketopantoate reductase PanE/ApbA VagVIO5_21910 PF01965 DJ-1/PfpI family VagVIO5_21920 PF00266 Aminotransferase class-V VagVIO5_21930 PF17158 Membrane-associated sensor, integral membrane domain VagVIO5_21930 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_21950 PF02657 Fe-S metabolism associated domain VagVIO5_21960 PF00899 ThiF family VagVIO5_21970 PF03562 MltA specific insert domain VagVIO5_21970 PF06725 3D domain VagVIO5_21990 PF00696 Amino acid kinase family VagVIO5_21990 PF00583 Acetyltransferase (GNAT) family VagVIO5_22030 PF13538 UvrD-like helicase C-terminal domain VagVIO5_22040 PF13361 UvrD-like helicase C-terminal domain VagVIO5_22040 PF12705 PD-(D/E)XK nuclease superfamily VagVIO5_22040 PF00580 UvrD/REP helicase N-terminal domain VagVIO5_22050 PF17946 RecC C-terminal domain VagVIO5_22060 PF11893 Domain of unknown function (DUF3413) VagVIO5_22060 PF00884 Sulfatase VagVIO5_22080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_22080 PF03466 LysR substrate binding domain VagVIO5_22090 PF07130 YebG protein VagVIO5_22100 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VagVIO5_22100 PF14602 Hexapeptide repeat of succinyl-transferase VagVIO5_22110 PF03009 Glycerophosphoryl diester phosphodiesterase family VagVIO5_22120 PF07690 Major Facilitator Superfamily VagVIO5_22130 PF00230 Major intrinsic protein VagVIO5_22140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VagVIO5_22140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VagVIO5_22150 PF08220 DeoR-like helix-turn-helix domain VagVIO5_22150 PF00455 DeoR C terminal sensor domain VagVIO5_22160 PF01266 FAD dependent oxidoreductase VagVIO5_22160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VagVIO5_22170 PF01544 CorA-like Mg2+ transporter protein VagVIO5_22200 PF01588 Putative tRNA binding domain VagVIO5_22210 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_22240 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_22250 PF01263 Aldose 1-epimerase VagVIO5_22260 PF00288 GHMP kinases N terminal domain VagVIO5_22260 PF10509 Galactokinase galactose-binding signature VagVIO5_22260 PF08544 GHMP kinases C terminal VagVIO5_22270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VagVIO5_22270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VagVIO5_22280 PF16363 GDP-mannose 4,6 dehydratase VagVIO5_22290 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_22300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VagVIO5_22300 PF16353 Domain of unknown function(DUF4981) VagVIO5_22300 PF00703 Glycosyl hydrolases family 2 VagVIO5_22300 PF02837 Glycosyl hydrolases family 2, sugar binding domain VagVIO5_22300 PF02929 Beta galactosidase small chain VagVIO5_22310 PF04074 YhcH/YjgK/YiaL VagVIO5_22320 PF13520 Amino acid permease VagVIO5_22330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_22330 PF03466 LysR substrate binding domain VagVIO5_22390 PF00437 Type II/IV secretion system protein VagVIO5_22450 PF04972 BON domain VagVIO5_22450 PF00263 Bacterial type II and III secretion system protein VagVIO5_22450 PF13629 Pilus formation protein N terminal region VagVIO5_22500 PF12833 Helix-turn-helix domain VagVIO5_22500 PF02805 Metal binding domain of Ada VagVIO5_22510 PF00501 AMP-binding enzyme VagVIO5_22530 PF03466 LysR substrate binding domain VagVIO5_22530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_22540 PF00679 Elongation factor G C-terminus VagVIO5_22540 PF03764 Elongation factor G, domain IV VagVIO5_22540 PF00009 Elongation factor Tu GTP binding domain VagVIO5_22540 PF03144 Elongation factor Tu domain 2 VagVIO5_22540 PF14492 Elongation Factor G, domain II VagVIO5_22550 PF18073 Rubredoxin metal binding domain VagVIO5_22570 PF18429 Domain of unknown function (DUF5609) VagVIO5_22590 PF01048 Phosphorylase superfamily VagVIO5_22600 PF01676 Metalloenzyme superfamily VagVIO5_22610 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VagVIO5_22610 PF00591 Glycosyl transferase family, a/b domain VagVIO5_22610 PF02885 Glycosyl transferase family, helical bundle domain VagVIO5_22620 PF01791 DeoC/LacD family aldolase VagVIO5_22630 PF07670 Nucleoside recognition VagVIO5_22630 PF07662 Na+ dependent nucleoside transporter C-terminus VagVIO5_22630 PF01773 Na+ dependent nucleoside transporter N-terminus VagVIO5_22640 PF01026 TatD related DNase VagVIO5_22660 PF03144 Elongation factor Tu domain 2 VagVIO5_22660 PF16658 Class II release factor RF3, C-terminal domain VagVIO5_22660 PF00009 Elongation factor Tu GTP binding domain VagVIO5_22670 PF01381 Helix-turn-helix VagVIO5_22670 PF00717 Peptidase S24-like VagVIO5_22760 PF06122 Conjugative relaxosome accessory transposon protein VagVIO5_22800 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_22800 PF00072 Response regulator receiver domain VagVIO5_22810 PF01116 Fructose-bisphosphate aldolase class-II VagVIO5_22850 PF13340 Putative transposase of IS4/5 family (DUF4096) VagVIO5_22860 PF01435 Peptidase family M48 VagVIO5_22880 PF00226 DnaJ domain VagVIO5_22880 PF01556 DnaJ C terminal domain VagVIO5_22890 PF10431 C-terminal, D2-small domain, of ClpB protein VagVIO5_22890 PF17871 AAA lid domain VagVIO5_22890 PF02861 Clp amino terminal domain, pathogenicity island component VagVIO5_22890 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_22890 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_22920 PF00012 Hsp70 protein VagVIO5_22930 PF01025 GrpE VagVIO5_22950 PF02080 TrkA-C domain VagVIO5_22950 PF00999 Sodium/hydrogen exchanger family VagVIO5_22950 PF02254 TrkA-N domain VagVIO5_22960 PF00011 Hsp20/alpha crystallin family VagVIO5_22970 PF00011 Hsp20/alpha crystallin family VagVIO5_22990 PF00158 Sigma-54 interaction domain VagVIO5_22990 PF00072 Response regulator receiver domain VagVIO5_22990 PF02954 Bacterial regulatory protein, Fis family VagVIO5_23090 PF04002 RadC-like JAB domain VagVIO5_23100 PF00092 von Willebrand factor type A domain VagVIO5_23140 PF08406 CbbQ/NirQ/NorQ C-terminal VagVIO5_23140 PF07728 AAA domain (dynein-related subfamily) VagVIO5_23180 PF00436 Single-strand binding protein family VagVIO5_23210 PF01609 Transposase DDE domain VagVIO5_23210 PF13006 Insertion element 4 transposase N-terminal VagVIO5_23220 PF01609 Transposase DDE domain VagVIO5_23220 PF13006 Insertion element 4 transposase N-terminal VagVIO5_23240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VagVIO5_23260 PF01699 Sodium/calcium exchanger protein VagVIO5_23270 PF00924 Mechanosensitive ion channel VagVIO5_23270 PF05552 Conserved TM helix VagVIO5_23280 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_23340 PF06986 Type-1V conjugative transfer system mating pair stabilisation VagVIO5_23350 PF06834 TraU protein VagVIO5_23370 PF10502 Signal peptidase, peptidase S26 VagVIO5_23400 PF13098 Thioredoxin-like domain VagVIO5_23400 PF10411 Disulfide bond isomerase protein N-terminus VagVIO5_23570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VagVIO5_23570 PF12008 Type I restriction and modification enzyme - subunit R C terminal VagVIO5_23570 PF18766 SWI2/SNF2 ATPase VagVIO5_23590 PF01420 Type I restriction modification DNA specificity domain VagVIO5_23600 PF12161 HsdM N-terminal domain VagVIO5_23600 PF02384 N-6 DNA Methylase VagVIO5_23630 PF07733 Bacterial DNA polymerase III alpha NTPase domain VagVIO5_23630 PF11490 DNA polymerase III polC-type N-terminus II VagVIO5_23630 PF02811 PHP domain VagVIO5_23630 PF00929 Exonuclease VagVIO5_23630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VagVIO5_23630 PF14579 Helix-hairpin-helix motif VagVIO5_23640 PF00717 Peptidase S24-like VagVIO5_23650 PF13438 Domain of unknown function (DUF4113) VagVIO5_23650 PF00817 impB/mucB/samB family VagVIO5_23650 PF11799 impB/mucB/samB family C-terminal domain VagVIO5_23660 PF13438 Domain of unknown function (DUF4113) VagVIO5_23660 PF11799 impB/mucB/samB family C-terminal domain VagVIO5_23660 PF00817 impB/mucB/samB family VagVIO5_23760 PF13508 Acetyltransferase (GNAT) domain VagVIO5_23770 PF02036 SCP-2 sterol transfer family VagVIO5_23780 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_23780 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_23780 PF00563 EAL domain VagVIO5_23790 PF01136 Peptidase family U32 VagVIO5_23800 PF01136 Peptidase family U32 VagVIO5_23810 PF01554 MatE VagVIO5_23830 PF13181 Tetratricopeptide repeat VagVIO5_23830 PF07719 Tetratricopeptide repeat VagVIO5_23840 PF00575 S1 RNA binding domain VagVIO5_23840 PF03725 3' exoribonuclease family, domain 2 VagVIO5_23840 PF01138 3' exoribonuclease family, domain 1 VagVIO5_23840 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VagVIO5_23840 PF00013 KH domain VagVIO5_23850 PF00312 Ribosomal protein S15 VagVIO5_23860 PF01509 TruB family pseudouridylate synthase (N terminal domain) VagVIO5_23860 PF16198 tRNA pseudouridylate synthase B C-terminal domain VagVIO5_23860 PF09157 Pseudouridine synthase II TruB, C-terminal VagVIO5_23870 PF02033 Ribosome-binding factor A VagVIO5_23880 PF00009 Elongation factor Tu GTP binding domain VagVIO5_23880 PF04760 Translation initiation factor IF-2, N-terminal region VagVIO5_23880 PF08364 Bacterial translation initiation factor IF-2 associated region VagVIO5_23880 PF11987 Translation-initiation factor 2 VagVIO5_23890 PF00575 S1 RNA binding domain VagVIO5_23890 PF08529 NusA N-terminal domain VagVIO5_23890 PF13184 NusA-like KH domain VagVIO5_23900 PF02576 RimP N-terminal domain VagVIO5_23900 PF17384 RimP C-terminal SH3 domain VagVIO5_23910 PF03840 Preprotein translocase SecG subunit VagVIO5_23920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VagVIO5_23920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VagVIO5_23920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VagVIO5_23920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VagVIO5_23930 PF00809 Pterin binding enzyme VagVIO5_23940 PF06480 FtsH Extracellular VagVIO5_23940 PF17862 AAA+ lid domain VagVIO5_23940 PF01434 Peptidase family M41 VagVIO5_23940 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_23950 PF01728 FtsJ-like methyltransferase VagVIO5_23960 PF01985 CRS1 / YhbY (CRM) domain VagVIO5_23970 PF03449 Transcription elongation factor, N-terminal VagVIO5_23970 PF01272 Transcription elongation factor, GreA/GreB, C-term VagVIO5_23980 PF13609 Gram-negative porin VagVIO5_23990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VagVIO5_24010 PF00579 tRNA synthetases class I (W and Y) VagVIO5_24020 PF01476 LysM domain VagVIO5_24020 PF01551 Peptidase family M23 VagVIO5_24020 PF08525 Opacity-associated protein A N-terminal motif VagVIO5_24030 PF00873 AcrB/AcrD/AcrF family VagVIO5_24050 PF01521 Iron-sulphur cluster biosynthesis VagVIO5_24060 PF00202 Aminotransferase class-III VagVIO5_24070 PF01594 AI-2E family transporter VagVIO5_24080 PF08468 Methyltransferase small domain N-terminal VagVIO5_24080 PF05175 Methyltransferase small domain VagVIO5_24090 PF00072 Response regulator receiver domain VagVIO5_24090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_24090 PF09308 LuxQ, periplasmic VagVIO5_24090 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_24100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_24110 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_24130 PF00005 ABC transporter VagVIO5_24130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_24140 PF00005 ABC transporter VagVIO5_24140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_24160 PF01869 BadF/BadG/BcrA/BcrD ATPase family VagVIO5_24170 PF00728 Glycosyl hydrolase family 20, catalytic domain VagVIO5_24170 PF02838 Glycosyl hydrolase family 20, domain 2 VagVIO5_24180 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VagVIO5_24180 PF06165 Glycosyltransferase family 36 VagVIO5_24190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VagVIO5_24190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VagVIO5_24190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VagVIO5_24190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VagVIO5_24200 PF00005 ABC transporter VagVIO5_24200 PF08402 TOBE domain VagVIO5_24220 PF13416 Bacterial extracellular solute-binding protein VagVIO5_24230 PF00909 Ammonium Transporter Family VagVIO5_24240 PF00543 Nitrogen regulatory protein P-II VagVIO5_24250 PF06062 Uncharacterised protein family (UPF0231) VagVIO5_24260 PF11791 Aconitate B N-terminal domain VagVIO5_24260 PF00330 Aconitase family (aconitate hydratase) VagVIO5_24260 PF06434 Aconitate hydratase 2 N-terminus VagVIO5_24270 PF01734 Patatin-like phospholipase VagVIO5_24280 PF00912 Transglycosylase VagVIO5_24280 PF14814 Bifunctional transglycosylase second domain VagVIO5_24280 PF00905 Penicillin binding protein transpeptidase domain VagVIO5_24290 PF08482 ATP-dependent helicase C-terminal VagVIO5_24290 PF04408 Helicase associated domain (HA2) VagVIO5_24290 PF00270 DEAD/DEAH box helicase VagVIO5_24290 PF00271 Helicase conserved C-terminal domain VagVIO5_24300 PF03749 Sugar fermentation stimulation protein RE domain VagVIO5_24300 PF17746 SfsA N-terminal OB domain VagVIO5_24310 PF01258 Prokaryotic dksA/traR C4-type zinc finger VagVIO5_24320 PF00749 tRNA synthetases class I (E and Q), catalytic domain VagVIO5_24330 PF12626 Polymerase A arginine-rich C-terminus VagVIO5_24330 PF12627 Probable RNA and SrmB- binding site of polymerase A VagVIO5_24330 PF01743 Poly A polymerase head domain VagVIO5_24340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VagVIO5_24350 PF02548 Ketopantoate hydroxymethyltransferase VagVIO5_24360 PF02569 Pantoate-beta-alanine ligase VagVIO5_24370 PF03279 Bacterial lipid A biosynthesis acyltransferase VagVIO5_24380 PF01061 ABC-2 type transporter VagVIO5_24390 PF00005 ABC transporter VagVIO5_24400 PF01740 STAS domain VagVIO5_24400 PF00916 Sulfate permease family VagVIO5_24410 PF00484 Carbonic anhydrase VagVIO5_24420 PF00156 Phosphoribosyl transferase domain VagVIO5_24430 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_24440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VagVIO5_24440 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_24450 PF02817 e3 binding domain VagVIO5_24450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VagVIO5_24450 PF00364 Biotin-requiring enzyme VagVIO5_24460 PF00456 Transketolase, thiamine diphosphate binding domain VagVIO5_24460 PF17831 Pyruvate dehydrogenase E1 component middle domain VagVIO5_24470 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_24470 PF07729 FCD domain VagVIO5_24480 PF01510 N-acetylmuramoyl-L-alanine amidase VagVIO5_24490 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VagVIO5_24490 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VagVIO5_24510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VagVIO5_24510 PF00437 Type II/IV secretion system protein VagVIO5_24520 PF00482 Type II secretion system (T2SS), protein F VagVIO5_24530 PF06750 Bacterial Peptidase A24 N-terminal domain VagVIO5_24530 PF01478 Type IV leader peptidase family VagVIO5_24540 PF01121 Dephospho-CoA kinase VagVIO5_24550 PF07072 Cell division protein VagVIO5_24560 PF03884 DNA gyrase inhibitor YacG VagVIO5_24570 PF01245 Ribosomal protein L19 VagVIO5_24580 PF01746 tRNA (Guanine-1)-methyltransferase VagVIO5_24590 PF05239 PRC-barrel domain VagVIO5_24590 PF01782 RimM N-terminal domain VagVIO5_24600 PF00886 Ribosomal protein S16 VagVIO5_24610 PF00448 SRP54-type protein, GTPase domain VagVIO5_24610 PF02881 SRP54-type protein, helical bundle domain VagVIO5_24610 PF02978 Signal peptide binding domain VagVIO5_24620 PF01578 Cytochrome C assembly protein VagVIO5_24630 PF01595 Cyclin M transmembrane N-terminal domain VagVIO5_24630 PF03471 Transporter associated domain VagVIO5_24630 PF00571 CBS domain VagVIO5_24640 PF02664 S-Ribosylhomocysteinase (LuxS) VagVIO5_24660 PF04262 Glutamate-cysteine ligase VagVIO5_24670 PF05193 Peptidase M16 inactive domain VagVIO5_24670 PF00675 Insulinase (Peptidase family M16) VagVIO5_24680 PF09335 SNARE associated Golgi protein VagVIO5_24700 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VagVIO5_24710 PF00682 HMGL-like VagVIO5_24710 PF02436 Conserved carboxylase domain VagVIO5_24710 PF00364 Biotin-requiring enzyme VagVIO5_24720 PF04277 Oxaloacetate decarboxylase, gamma chain VagVIO5_24730 PF02599 Global regulator protein family VagVIO5_24740 PF13840 ACT domain VagVIO5_24740 PF00696 Amino acid kinase family VagVIO5_24740 PF01842 ACT domain VagVIO5_24750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VagVIO5_24750 PF02272 DHHA1 domain VagVIO5_24750 PF01411 tRNA synthetases class II (A) VagVIO5_24760 PF02631 RecX family VagVIO5_24770 PF00154 recA bacterial DNA recombination protein VagVIO5_24780 PF02464 Competence-damaged protein VagVIO5_24790 PF05188 MutS domain II VagVIO5_24790 PF00488 MutS domain V VagVIO5_24790 PF01624 MutS domain I VagVIO5_24790 PF05190 MutS family domain IV VagVIO5_24790 PF05192 MutS domain III VagVIO5_24800 PF04539 Sigma-70 region 3 VagVIO5_24800 PF04542 Sigma-70 region 2 VagVIO5_24800 PF00140 Sigma-70 factor, region 1.2 VagVIO5_24800 PF04545 Sigma-70, region 4 VagVIO5_24810 PF01551 Peptidase family M23 VagVIO5_24810 PF01476 LysM domain VagVIO5_24830 PF01975 Survival protein SurE VagVIO5_24840 PF01142 tRNA pseudouridine synthase D (TruD) VagVIO5_24850 PF02542 YgbB family VagVIO5_24860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VagVIO5_24870 PF04977 Septum formation initiator VagVIO5_24880 PF00113 Enolase, C-terminal TIM barrel domain VagVIO5_24880 PF03952 Enolase, N-terminal domain VagVIO5_24890 PF06418 CTP synthase N-terminus VagVIO5_24890 PF00117 Glutamine amidotransferase class-I VagVIO5_24900 PF03819 MazG nucleotide pyrophosphohydrolase domain VagVIO5_24910 PF04607 Region found in RelA / SpoT proteins VagVIO5_24910 PF02824 TGS domain VagVIO5_24910 PF13291 ACT domain VagVIO5_24920 PF01938 TRAM domain VagVIO5_24920 PF05958 tRNA (Uracil-5-)-methyltransferase VagVIO5_24930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VagVIO5_24930 PF00072 Response regulator receiver domain VagVIO5_24930 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_24930 PF01627 Hpt domain VagVIO5_24930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_24930 PF00672 HAMP domain VagVIO5_24940 PF01648 4'-phosphopantetheinyl transferase superfamily VagVIO5_24950 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VagVIO5_24960 PF11967 Recombination protein O N terminal VagVIO5_24960 PF02565 Recombination protein O C terminal VagVIO5_24970 PF01926 50S ribosome-binding GTPase VagVIO5_24970 PF07650 KH domain VagVIO5_24980 PF14622 Ribonuclease-III-like VagVIO5_24980 PF00035 Double-stranded RNA binding motif VagVIO5_24990 PF10502 Signal peptidase, peptidase S26 VagVIO5_25000 PF00679 Elongation factor G C-terminus VagVIO5_25000 PF00009 Elongation factor Tu GTP binding domain VagVIO5_25000 PF06421 GTP-binding protein LepA C-terminus VagVIO5_25000 PF03144 Elongation factor Tu domain 2 VagVIO5_25020 PF17188 MucB/RseB C-terminal domain VagVIO5_25020 PF03888 MucB/RseB N-terminal domain VagVIO5_25030 PF03873 Anti sigma-E protein RseA, C-terminal domain VagVIO5_25030 PF03872 Anti sigma-E protein RseA, N-terminal domain VagVIO5_25040 PF08281 Sigma-70, region 4 VagVIO5_25040 PF04542 Sigma-70 region 2 VagVIO5_25050 PF02910 Fumarate reductase flavoprotein C-term VagVIO5_25050 PF00890 FAD binding domain VagVIO5_25070 PF03937 Flavinator of succinate dehydrogenase VagVIO5_25080 PF01571 Aminomethyltransferase folate-binding domain VagVIO5_25110 PF01494 FAD binding domain VagVIO5_25120 PF01494 FAD binding domain VagVIO5_25130 PF03695 Uncharacterised protein family (UPF0149) VagVIO5_25140 PF05164 Cell division protein ZapA VagVIO5_25150 PF01812 5-formyltetrahydrofolate cyclo-ligase family VagVIO5_25160 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VagVIO5_25170 PF01842 ACT domain VagVIO5_25170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VagVIO5_25170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VagVIO5_25180 PF04402 Protein of unknown function (DUF541) VagVIO5_25190 PF03466 LysR substrate binding domain VagVIO5_25190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_25200 PF01810 LysE type translocator VagVIO5_25220 PF00924 Mechanosensitive ion channel VagVIO5_25220 PF05552 Conserved TM helix VagVIO5_25230 PF01116 Fructose-bisphosphate aldolase class-II VagVIO5_25240 PF00162 Phosphoglycerate kinase VagVIO5_25250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VagVIO5_25250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VagVIO5_25260 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_25260 PF00593 TonB dependent receptor VagVIO5_25270 PF03466 LysR substrate binding domain VagVIO5_25270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_25280 PF02779 Transketolase, pyrimidine binding domain VagVIO5_25280 PF00456 Transketolase, thiamine diphosphate binding domain VagVIO5_25280 PF02780 Transketolase, C-terminal domain VagVIO5_25290 PF00438 S-adenosylmethionine synthetase, N-terminal domain VagVIO5_25290 PF02772 S-adenosylmethionine synthetase, central domain VagVIO5_25290 PF02773 S-adenosylmethionine synthetase, C-terminal domain VagVIO5_25310 PF17283 SprT-like zinc ribbon domain VagVIO5_25310 PF10263 SprT-like family VagVIO5_25320 PF04231 Endonuclease I VagVIO5_25330 PF04452 RNA methyltransferase VagVIO5_25340 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VagVIO5_25340 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VagVIO5_25350 PF02622 Uncharacterized ACR, COG1678 VagVIO5_25360 PF03652 Holliday junction resolvase VagVIO5_25370 PF00437 Type II/IV secretion system protein VagVIO5_25380 PF00437 Type II/IV secretion system protein VagVIO5_25390 PF01168 Alanine racemase, N-terminal domain VagVIO5_25400 PF03807 NADP oxidoreductase coenzyme F420-dependent VagVIO5_25400 PF14748 Pyrroline-5-carboxylate reductase dimerisation VagVIO5_25410 PF02325 YGGT family VagVIO5_25420 PF02594 Uncharacterised ACR, YggU family COG1872 VagVIO5_25440 PF01725 Ham1 family VagVIO5_25450 PF04055 Radical SAM superfamily VagVIO5_25450 PF06969 HemN C-terminal domain VagVIO5_25460 PF04960 Glutaminase VagVIO5_25470 PF02086 D12 class N6 adenine-specific DNA methyltransferase VagVIO5_25480 PF02390 Putative methyltransferase VagVIO5_25490 PF00633 Helix-hairpin-helix motif VagVIO5_25490 PF14815 NUDIX domain VagVIO5_25490 PF00730 HhH-GPD superfamily base excision DNA repair protein VagVIO5_25500 PF04362 Bacterial Fe(2+) trafficking VagVIO5_25510 PF01464 Transglycosylase SLT domain VagVIO5_25510 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VagVIO5_25520 PF00672 HAMP domain VagVIO5_25520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_25520 PF17200 Single Cache domain 2 VagVIO5_25530 PF00171 Aldehyde dehydrogenase family VagVIO5_25550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VagVIO5_25550 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_25560 PF04794 YdjC-like protein VagVIO5_25570 PF02056 Family 4 glycosyl hydrolase VagVIO5_25570 PF11975 Family 4 glycosyl hydrolase C-terminal domain VagVIO5_25580 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VagVIO5_25590 PF02378 Phosphotransferase system, EIIC VagVIO5_25600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VagVIO5_25610 PF01522 Polysaccharide deacetylase VagVIO5_25620 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_25620 PF08448 PAS fold VagVIO5_25630 PF02371 Transposase IS116/IS110/IS902 family VagVIO5_25630 PF01548 Transposase VagVIO5_25640 PF02371 Transposase IS116/IS110/IS902 family VagVIO5_25640 PF01548 Transposase VagVIO5_25660 PF13737 Transposase DDE domain VagVIO5_25680 PF00483 Nucleotidyl transferase VagVIO5_25760 PF00072 Response regulator receiver domain VagVIO5_25760 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_25930 PF10011 Predicted membrane protein (DUF2254) VagVIO5_25950 PF03739 Lipopolysaccharide export system permease LptF/LptG VagVIO5_25960 PF03739 Lipopolysaccharide export system permease LptF/LptG VagVIO5_25970 PF00883 Cytosol aminopeptidase family, catalytic domain VagVIO5_25970 PF02789 Cytosol aminopeptidase family, N-terminal domain VagVIO5_25980 PF04364 DNA polymerase III chi subunit, HolC VagVIO5_25990 PF10458 Valyl tRNA synthetase tRNA binding arm VagVIO5_25990 PF00133 tRNA synthetases class I (I, L, M and V) VagVIO5_25990 PF08264 Anticodon-binding domain of tRNA VagVIO5_26010 PF00583 Acetyltransferase (GNAT) family VagVIO5_26030 PF06877 Regulator of ribonuclease activity B VagVIO5_26050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VagVIO5_26050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VagVIO5_26070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VagVIO5_26070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VagVIO5_26080 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VagVIO5_26080 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VagVIO5_26090 PF01042 Endoribonuclease L-PSP VagVIO5_26100 PF01553 Acyltransferase VagVIO5_26110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VagVIO5_26120 PF01722 BolA-like protein VagVIO5_26140 PF05494 MlaC protein VagVIO5_26150 PF02470 MlaD protein VagVIO5_26160 PF02405 Permease MlaE VagVIO5_26170 PF00005 ABC transporter VagVIO5_26180 PF01699 Sodium/calcium exchanger protein VagVIO5_26190 PF00571 CBS domain VagVIO5_26190 PF01380 SIS domain VagVIO5_26210 PF03968 OstA-like protein VagVIO5_26220 PF00005 ABC transporter VagVIO5_26220 PF12399 Branched-chain amino acid ATP-binding cassette transporter VagVIO5_26230 PF00309 Sigma-54 factor, Activator interacting domain (AID) VagVIO5_26230 PF04963 Sigma-54 factor, core binding domain VagVIO5_26230 PF04552 Sigma-54, DNA binding domain VagVIO5_26240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VagVIO5_26250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VagVIO5_26260 PF03668 P-loop ATPase protein family VagVIO5_26270 PF00381 PTS HPr component phosphorylation site VagVIO5_26280 PF00571 CBS domain VagVIO5_26280 PF01769 Divalent cation transporter VagVIO5_26280 PF03448 MgtE intracellular N domain VagVIO5_26290 PF01523 Putative modulator of DNA gyrase VagVIO5_26300 PF04751 Protein of unknown function (DUF615) VagVIO5_26310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VagVIO5_26310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VagVIO5_26320 PF00849 RNA pseudouridylate synthase VagVIO5_26340 PF00176 SNF2 family N-terminal domain VagVIO5_26340 PF12137 RNA polymerase recycling family C-terminal VagVIO5_26340 PF18337 RapA N-terminal Tudor like domain VagVIO5_26340 PF18339 RapA N-terminal Tudor like domain 1 VagVIO5_26340 PF00271 Helicase conserved C-terminal domain VagVIO5_26350 PF13638 PIN domain VagVIO5_26350 PF02562 PhoH-like protein VagVIO5_26360 PF01523 Putative modulator of DNA gyrase VagVIO5_26370 PF00795 Carbon-nitrogen hydrolase VagVIO5_26380 PF13502 AsmA-like C-terminal region VagVIO5_26380 PF13116 Protein of unknown function VagVIO5_26390 PF00575 S1 RNA binding domain VagVIO5_26390 PF10150 Ribonuclease E/G family VagVIO5_26400 PF02545 Maf-like protein VagVIO5_26410 PF04093 rod shape-determining protein MreD VagVIO5_26420 PF04085 rod shape-determining protein MreC VagVIO5_26500 PF07963 Prokaryotic N-terminal methylation motif VagVIO5_26500 PF00114 Pilin (bacterial filament) VagVIO5_26520 PF00482 Type II secretion system (T2SS), protein F VagVIO5_26530 PF00437 Type II/IV secretion system protein VagVIO5_26530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VagVIO5_26550 PF13401 AAA domain VagVIO5_26550 PF01471 Putative peptidoglycan binding domain VagVIO5_26560 PF00263 Bacterial type II and III secretion system protein VagVIO5_26560 PF03958 Bacterial type II/III secretion system short domain VagVIO5_26600 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_26600 PF00563 EAL domain VagVIO5_26600 PF17157 Gammaproteobacterial periplasmic sensor domain VagVIO5_26610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VagVIO5_26610 PF01348 Type II intron maturase VagVIO5_26620 PF00436 Single-strand binding protein family VagVIO5_26630 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_26640 PF00483 Nucleotidyl transferase VagVIO5_26650 PF00005 ABC transporter VagVIO5_26650 PF17755 UvrA DNA-binding domain VagVIO5_26650 PF17760 UvrA interaction domain VagVIO5_26670 PF00266 Aminotransferase class-V VagVIO5_26680 PF00696 Amino acid kinase family VagVIO5_26680 PF01842 ACT domain VagVIO5_26690 PF02310 B12 binding domain VagVIO5_26690 PF00809 Pterin binding enzyme VagVIO5_26690 PF02574 Homocysteine S-methyltransferase VagVIO5_26690 PF02607 B12 binding domain VagVIO5_26690 PF02965 Vitamin B12 dependent methionine synthase, activation domain VagVIO5_26700 PF00999 Sodium/hydrogen exchanger family VagVIO5_26710 PF00665 Integrase core domain VagVIO5_26720 PF01527 Transposase VagVIO5_26730 PF01507 Phosphoadenosine phosphosulfate reductase family VagVIO5_26740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VagVIO5_26740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VagVIO5_26750 PF00258 Flavodoxin VagVIO5_26750 PF00175 Oxidoreductase NAD-binding domain VagVIO5_26750 PF00667 FAD binding domain VagVIO5_26790 PF01207 Dihydrouridine synthase (Dus) VagVIO5_26820 PF01810 LysE type translocator VagVIO5_26840 PF02754 Cysteine-rich domain VagVIO5_26840 PF13183 4Fe-4S dicluster domain VagVIO5_26850 PF00890 FAD binding domain VagVIO5_26860 PF01266 FAD dependent oxidoreductase VagVIO5_26860 PF04324 BFD-like [2Fe-2S] binding domain VagVIO5_26870 PF13737 Transposase DDE domain VagVIO5_27000 PF01475 Ferric uptake regulator family VagVIO5_27020 PF00342 Phosphoglucose isomerase VagVIO5_27040 PF01894 Uncharacterised protein family UPF0047 VagVIO5_27050 PF00842 Alanine racemase, C-terminal domain VagVIO5_27050 PF01168 Alanine racemase, N-terminal domain VagVIO5_27060 PF00772 DnaB-like helicase N terminal domain VagVIO5_27060 PF03796 DnaB-like helicase C terminal domain VagVIO5_27080 PF03948 Ribosomal protein L9, C-terminal domain VagVIO5_27080 PF01281 Ribosomal protein L9, N-terminal domain VagVIO5_27090 PF01084 Ribosomal protein S18 VagVIO5_27100 PF00436 Single-strand binding protein family VagVIO5_27110 PF01250 Ribosomal protein S6 VagVIO5_27120 PF00834 Ribulose-phosphate 3 epimerase family VagVIO5_27130 PF02086 D12 class N6 adenine-specific DNA methyltransferase VagVIO5_27150 PF01761 3-dehydroquinate synthase VagVIO5_27160 PF01202 Shikimate kinase VagVIO5_27170 PF03958 Bacterial type II/III secretion system short domain VagVIO5_27170 PF00263 Bacterial type II and III secretion system protein VagVIO5_27170 PF11741 AMIN domain VagVIO5_27170 PF07660 Secretin and TonB N terminus short domain VagVIO5_27220 PF00905 Penicillin binding protein transpeptidase domain VagVIO5_27220 PF00912 Transglycosylase VagVIO5_27220 PF17092 Penicillin-binding protein OB-like domain VagVIO5_27230 PF03466 LysR substrate binding domain VagVIO5_27230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_27240 PF00462 Glutaredoxin VagVIO5_27240 PF08534 Redoxin VagVIO5_27250 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_27250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VagVIO5_27280 PF14698 Argininosuccinate lyase C-terminal VagVIO5_27280 PF00206 Lyase VagVIO5_27280 PF00583 Acetyltransferase (GNAT) family VagVIO5_27290 PF00764 Arginosuccinate synthase VagVIO5_27300 PF00696 Amino acid kinase family VagVIO5_27310 PF02774 Semialdehyde dehydrogenase, dimerisation domain VagVIO5_27310 PF01118 Semialdehyde dehydrogenase, NAD binding domain VagVIO5_27320 PF07687 Peptidase dimerisation domain VagVIO5_27320 PF01546 Peptidase family M20/M25/M40 VagVIO5_27330 PF00311 Phosphoenolpyruvate carboxylase VagVIO5_27350 PF02219 Methylenetetrahydrofolate reductase VagVIO5_27360 PF03447 Homoserine dehydrogenase, NAD binding domain VagVIO5_27360 PF00742 Homoserine dehydrogenase VagVIO5_27360 PF00696 Amino acid kinase family VagVIO5_27370 PF01053 Cys/Met metabolism PLP-dependent enzyme VagVIO5_27390 PF00390 Malic enzyme, N-terminal domain VagVIO5_27390 PF03949 Malic enzyme, NAD binding domain VagVIO5_27400 PF00210 Ferritin-like domain VagVIO5_27410 PF04324 BFD-like [2Fe-2S] binding domain VagVIO5_27420 PF03144 Elongation factor Tu domain 2 VagVIO5_27420 PF00009 Elongation factor Tu GTP binding domain VagVIO5_27420 PF03143 Elongation factor Tu C-terminal domain VagVIO5_27430 PF03764 Elongation factor G, domain IV VagVIO5_27430 PF14492 Elongation Factor G, domain II VagVIO5_27430 PF00679 Elongation factor G C-terminus VagVIO5_27430 PF00009 Elongation factor Tu GTP binding domain VagVIO5_27430 PF03144 Elongation factor Tu domain 2 VagVIO5_27440 PF00177 Ribosomal protein S7p/S5e VagVIO5_27450 PF00164 Ribosomal protein S12/S23 VagVIO5_27460 PF04077 DsrH like protein VagVIO5_27470 PF02635 DsrE/DsrF-like family VagVIO5_27480 PF02635 DsrE/DsrF-like family VagVIO5_27490 PF08348 YheO-like PAS domain VagVIO5_27490 PF13309 HTH domain VagVIO5_27500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VagVIO5_27500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VagVIO5_27520 PF04102 SlyX VagVIO5_27530 PF01112 Asparaginase VagVIO5_27540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VagVIO5_27560 PF00999 Sodium/hydrogen exchanger family VagVIO5_27560 PF02254 TrkA-N domain VagVIO5_27570 PF02525 Flavodoxin-like fold VagVIO5_27580 PF00005 ABC transporter VagVIO5_27580 PF12848 ABC transporter VagVIO5_27600 PF00561 alpha/beta hydrolase fold VagVIO5_27610 PF06794 Uncharacterised protein family (UPF0270) VagVIO5_27620 PF00485 Phosphoribulokinase / Uridine kinase family VagVIO5_27630 PF13545 Crp-like helix-turn-helix domain VagVIO5_27630 PF00027 Cyclic nucleotide-binding domain VagVIO5_27650 PF00171 Aldehyde dehydrogenase family VagVIO5_27660 PF04958 Arginine N-succinyltransferase beta subunit VagVIO5_27670 PF00202 Aminotransferase class-III VagVIO5_27680 PF00117 Glutamine amidotransferase class-I VagVIO5_27710 PF00579 tRNA synthetases class I (W and Y) VagVIO5_27720 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_27730 PF08032 RNA 2'-O ribose methyltransferase substrate binding VagVIO5_27730 PF00588 SpoU rRNA Methylase family VagVIO5_27740 PF00575 S1 RNA binding domain VagVIO5_27740 PF08461 Ribonuclease R winged-helix domain VagVIO5_27740 PF08206 Ribonuclease B OB domain VagVIO5_27740 PF00773 RNB domain VagVIO5_27740 PF17876 Cold shock domain VagVIO5_27750 PF02082 Transcriptional regulator VagVIO5_27760 PF00175 Oxidoreductase NAD-binding domain VagVIO5_27760 PF00042 Globin VagVIO5_27760 PF00970 Oxidoreductase FAD-binding domain VagVIO5_27770 PF08238 Sel1 repeat VagVIO5_27780 PF00709 Adenylosuccinate synthetase VagVIO5_27790 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VagVIO5_27800 PF01145 SPFH domain / Band 7 family VagVIO5_27810 PF12221 Bacterial membrane protein N terminal VagVIO5_27810 PF01145 SPFH domain / Band 7 family VagVIO5_27820 PF16360 GTP-binding GTPase Middle Region VagVIO5_27820 PF01926 50S ribosome-binding GTPase VagVIO5_27820 PF13167 GTP-binding GTPase N-terminal VagVIO5_27830 PF17209 Hfq protein VagVIO5_27850 PF01119 DNA mismatch repair protein, C-terminal domain VagVIO5_27850 PF08676 MutL C terminal dimerisation domain VagVIO5_27860 PF01520 N-acetylmuramoyl-L-alanine amidase VagVIO5_27870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VagVIO5_27880 PF08331 Domain of unknown function (DUF1730) VagVIO5_27890 PF00929 Exonuclease VagVIO5_27900 PF03193 RsgA GTPase VagVIO5_27910 PF02666 Phosphatidylserine decarboxylase VagVIO5_27920 PF02080 TrkA-C domain VagVIO5_27920 PF03600 Citrate transporter VagVIO5_27940 PF01676 Metalloenzyme superfamily VagVIO5_27940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VagVIO5_27950 PF00581 Rhodanese-like domain VagVIO5_27960 PF02556 Preprotein translocase subunit SecB VagVIO5_27970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VagVIO5_27970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VagVIO5_27980 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_27980 PF06426 Serine acetyltransferase, N-terminal VagVIO5_27990 PF01551 Peptidase family M23 VagVIO5_28010 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_28010 PF08360 QacR-like protein, C-terminal region VagVIO5_28030 PF00152 tRNA synthetases class II (D, K and N) VagVIO5_28040 PF02910 Fumarate reductase flavoprotein C-term VagVIO5_28040 PF00890 FAD binding domain VagVIO5_28050 PF13085 2Fe-2S iron-sulfur cluster binding domain VagVIO5_28050 PF13183 4Fe-4S dicluster domain VagVIO5_28060 PF02300 Fumarate reductase subunit C VagVIO5_28070 PF02313 Fumarate reductase subunit D VagVIO5_28090 PF01132 Elongation factor P (EF-P) OB domain VagVIO5_28090 PF08207 Elongation factor P (EF-P) KOW-like domain VagVIO5_28090 PF09285 Elongation factor P, C-terminal VagVIO5_28100 PF04055 Radical SAM superfamily VagVIO5_28110 PF02308 MgtC family VagVIO5_28130 PF00118 TCP-1/cpn60 chaperonin family VagVIO5_28140 PF00166 Chaperonin 10 Kd subunit VagVIO5_28150 PF01554 MatE VagVIO5_28160 PF00365 Phosphofructokinase VagVIO5_28170 PF01545 Cation efflux family VagVIO5_28170 PF16916 Dimerisation domain of Zinc Transporter VagVIO5_28190 PF00072 Response regulator receiver domain VagVIO5_28190 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_28200 PF00672 HAMP domain VagVIO5_28200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_28200 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_28200 PF16527 Two-component sensor protein CpxA, periplasmic domain VagVIO5_28210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VagVIO5_28210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VagVIO5_28220 PF00588 SpoU rRNA Methylase family VagVIO5_28230 PF04186 FxsA cytoplasmic membrane protein VagVIO5_28240 PF10415 Fumarase C C-terminus VagVIO5_28240 PF00206 Lyase VagVIO5_28250 PF03605 Anaerobic c4-dicarboxylate membrane transporter VagVIO5_28260 PF11412 Disulphide bond corrector protein DsbC VagVIO5_28260 PF02683 Cytochrome C biogenesis protein transmembrane region VagVIO5_28270 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_28270 PF00072 Response regulator receiver domain VagVIO5_28280 PF03471 Transporter associated domain VagVIO5_28280 PF00999 Sodium/hydrogen exchanger family VagVIO5_28280 PF02080 TrkA-C domain VagVIO5_28300 PF00474 Sodium:solute symporter family VagVIO5_28330 PF00206 Lyase VagVIO5_28330 PF10415 Fumarase C C-terminus VagVIO5_28340 PF00072 Response regulator receiver domain VagVIO5_28340 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_28340 PF09308 LuxQ, periplasmic VagVIO5_28340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_28350 PF12832 MFS_1 like family VagVIO5_28380 PF16177 Acetyl-coenzyme A synthetase N-terminus VagVIO5_28380 PF00501 AMP-binding enzyme VagVIO5_28380 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_28390 PF01220 Dehydroquinase class II VagVIO5_28400 PF00364 Biotin-requiring enzyme VagVIO5_28410 PF02785 Biotin carboxylase C-terminal domain VagVIO5_28410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VagVIO5_28410 PF00289 Biotin carboxylase, N-terminal domain VagVIO5_28430 PF01207 Dihydrouridine synthase (Dus) VagVIO5_28440 PF02954 Bacterial regulatory protein, Fis family VagVIO5_28460 PF12848 ABC transporter VagVIO5_28460 PF00005 ABC transporter VagVIO5_28470 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VagVIO5_28470 PF01276 Orn/Lys/Arg decarboxylase, major domain VagVIO5_28470 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VagVIO5_28480 PF13520 Amino acid permease VagVIO5_28500 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_28500 PF18500 CadC C-terminal domain 1 VagVIO5_28510 PF13411 MerR HTH family regulatory protein VagVIO5_28520 PF02142 MGS-like domain VagVIO5_28520 PF01808 AICARFT/IMPCHase bienzyme VagVIO5_28530 PF02844 Phosphoribosylglycinamide synthetase, N domain VagVIO5_28530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VagVIO5_28530 PF02843 Phosphoribosylglycinamide synthetase, C domain VagVIO5_28550 PF00216 Bacterial DNA-binding protein VagVIO5_28560 PF01595 Cyclin M transmembrane N-terminal domain VagVIO5_28560 PF00571 CBS domain VagVIO5_28570 PF04222 Protein of unknown function (DUF416) VagVIO5_28580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VagVIO5_28590 PF03167 Uracil DNA glycosylase superfamily VagVIO5_28600 PF01208 Uroporphyrinogen decarboxylase (URO-D) VagVIO5_28610 PF00293 NUDIX domain VagVIO5_28610 PF09297 NADH pyrophosphatase zinc ribbon domain VagVIO5_28620 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VagVIO5_28630 PF04983 RNA polymerase Rpb1, domain 3 VagVIO5_28630 PF00623 RNA polymerase Rpb1, domain 2 VagVIO5_28630 PF04997 RNA polymerase Rpb1, domain 1 VagVIO5_28630 PF04998 RNA polymerase Rpb1, domain 5 VagVIO5_28630 PF05000 RNA polymerase Rpb1, domain 4 VagVIO5_28640 PF04563 RNA polymerase beta subunit VagVIO5_28640 PF10385 RNA polymerase beta subunit external 1 domain VagVIO5_28640 PF04565 RNA polymerase Rpb2, domain 3 VagVIO5_28640 PF04561 RNA polymerase Rpb2, domain 2 VagVIO5_28640 PF04560 RNA polymerase Rpb2, domain 7 VagVIO5_28640 PF00562 RNA polymerase Rpb2, domain 6 VagVIO5_28650 PF00542 Ribosomal protein L7/L12 C-terminal domain VagVIO5_28650 PF16320 Ribosomal protein L7/L12 dimerisation domain VagVIO5_28660 PF00466 Ribosomal protein L10 VagVIO5_28670 PF00687 Ribosomal protein L1p/L10e family VagVIO5_28680 PF00298 Ribosomal protein L11, RNA binding domain VagVIO5_28680 PF03946 Ribosomal protein L11, N-terminal domain VagVIO5_28690 PF02357 Transcription termination factor nusG VagVIO5_28690 PF00467 KOW motif VagVIO5_28700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VagVIO5_28710 PF03144 Elongation factor Tu domain 2 VagVIO5_28710 PF03143 Elongation factor Tu C-terminal domain VagVIO5_28710 PF00009 Elongation factor Tu GTP binding domain VagVIO5_28720 PF00485 Phosphoribulokinase / Uridine kinase family VagVIO5_28730 PF08279 HTH domain VagVIO5_28730 PF03099 Biotin/lipoate A/B protein ligase family VagVIO5_28730 PF02237 Biotin protein ligase C terminal domain VagVIO5_28740 PF01565 FAD binding domain VagVIO5_28740 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VagVIO5_28760 PF13091 PLD-like domain VagVIO5_28780 PF01177 Asp/Glu/Hydantoin racemase VagVIO5_28800 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_28800 PF00593 TonB dependent receptor VagVIO5_28810 PF05958 tRNA (Uracil-5-)-methyltransferase VagVIO5_28830 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_28840 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_28840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VagVIO5_28850 PF01554 MatE VagVIO5_28860 PF04072 Leucine carboxyl methyltransferase VagVIO5_28870 PF00717 Peptidase S24-like VagVIO5_28870 PF01726 LexA DNA binding domain VagVIO5_28880 PF01553 Acyltransferase VagVIO5_28890 PF01040 UbiA prenyltransferase family VagVIO5_28900 PF04345 Chorismate lyase VagVIO5_28910 PF03748 Flagellar basal body-associated protein FliL VagVIO5_28920 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VagVIO5_28920 PF01694 Rhomboid family VagVIO5_28930 PF00581 Rhodanese-like domain VagVIO5_28940 PF04542 Sigma-70 region 2 VagVIO5_28940 PF00140 Sigma-70 factor, region 1.2 VagVIO5_28940 PF04545 Sigma-70, region 4 VagVIO5_28950 PF18075 FtsX extracellular domain VagVIO5_28960 PF00005 ABC transporter VagVIO5_28970 PF00448 SRP54-type protein, GTPase domain VagVIO5_28970 PF02881 SRP54-type protein, helical bundle domain VagVIO5_29000 PF01914 MarC family integral membrane protein VagVIO5_29050 PF10694 Protein of unknown function (DUF2500) VagVIO5_29090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VagVIO5_29090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VagVIO5_29100 PF01022 Bacterial regulatory protein, arsR family VagVIO5_29110 PF00563 EAL domain VagVIO5_29110 PF08668 HDOD domain VagVIO5_29120 PF01810 LysE type translocator VagVIO5_29130 PF12146 Serine aminopeptidase, S33 VagVIO5_29180 PF10442 FIST C domain VagVIO5_29180 PF08495 FIST N domain VagVIO5_29180 PF00563 EAL domain VagVIO5_29180 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_29190 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_29200 PF00589 Phage integrase family VagVIO5_29200 PF02899 Phage integrase, N-terminal SAM-like domain VagVIO5_29220 PF01678 Diaminopimelate epimerase VagVIO5_29230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VagVIO5_29230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VagVIO5_29240 PF01491 Frataxin-like domain VagVIO5_29260 PF01295 Adenylate cyclase, class-I VagVIO5_29260 PF12633 Adenylate cyclase NT domain VagVIO5_29270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VagVIO5_29270 PF03900 Porphobilinogen deaminase, C-terminal domain VagVIO5_29280 PF02602 Uroporphyrinogen-III synthase HemD VagVIO5_29290 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VagVIO5_29300 PF07219 HemY protein N-terminus VagVIO5_29310 PF00175 Oxidoreductase NAD-binding domain VagVIO5_29320 PF00111 2Fe-2S iron-sulfur cluster binding domain VagVIO5_29330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VagVIO5_29350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VagVIO5_29350 PF07498 Rho termination factor, N-terminal domain VagVIO5_29350 PF07497 Rho termination factor, RNA-binding domain VagVIO5_29360 PF00085 Thioredoxin VagVIO5_29370 PF00271 Helicase conserved C-terminal domain VagVIO5_29370 PF00270 DEAD/DEAH box helicase VagVIO5_29380 PF02541 Ppx/GppA phosphatase family VagVIO5_29390 PF02592 Putative vitamin uptake transporter VagVIO5_29410 PF09382 RQC domain VagVIO5_29410 PF16124 RecQ zinc-binding VagVIO5_29410 PF00570 HRDC domain VagVIO5_29410 PF00271 Helicase conserved C-terminal domain VagVIO5_29410 PF00270 DEAD/DEAH box helicase VagVIO5_29420 PF00892 EamA-like transporter family VagVIO5_29440 PF01810 LysE type translocator VagVIO5_29470 PF00580 UvrD/REP helicase N-terminal domain VagVIO5_29470 PF13361 UvrD-like helicase C-terminal domain VagVIO5_29490 PF05114 Protein of unknown function (DUF692) VagVIO5_29530 PF07690 Major Facilitator Superfamily VagVIO5_29540 PF03466 LysR substrate binding domain VagVIO5_29540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_29550 PF00557 Metallopeptidase family M24 VagVIO5_29550 PF01321 Creatinase/Prolidase N-terminal domain VagVIO5_29550 PF00557 Metallopeptidase family M24 VagVIO5_29550 PF01321 Creatinase/Prolidase N-terminal domain VagVIO5_29560 PF04055 Radical SAM superfamily VagVIO5_29560 PF06968 Biotin and Thiamin Synthesis associated domain VagVIO5_29570 PF05690 Thiazole biosynthesis protein ThiG VagVIO5_29590 PF00899 ThiF family VagVIO5_29600 PF02581 Thiamine monophosphate synthase VagVIO5_29610 PF13667 ThiC-associated domain VagVIO5_29610 PF01964 Radical SAM ThiC family VagVIO5_29620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VagVIO5_29630 PF07732 Multicopper oxidase VagVIO5_29630 PF07731 Multicopper oxidase VagVIO5_29630 PF00394 Multicopper oxidase VagVIO5_29640 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_29650 PF07369 Protein of unknown function (DUF1488) VagVIO5_29660 PF08501 Shikimate dehydrogenase substrate binding domain VagVIO5_29660 PF01488 Shikimate / quinate 5-dehydrogenase VagVIO5_29660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VagVIO5_29670 PF01218 Coproporphyrinogen III oxidase VagVIO5_29680 PF01300 Telomere recombination VagVIO5_29690 PF00731 AIR carboxylase VagVIO5_29700 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VagVIO5_29700 PF02222 ATP-grasp domain VagVIO5_29710 PF01396 Topoisomerase DNA binding C4 zinc finger VagVIO5_29720 PF04361 Protein of unknown function (DUF494) VagVIO5_29730 PF02481 DNA recombination-mediator protein A VagVIO5_29730 PF17782 DprA winged helix domain VagVIO5_29750 PF01327 Polypeptide deformylase VagVIO5_29760 PF00551 Formyl transferase VagVIO5_29760 PF02911 Formyl transferase, C-terminal domain VagVIO5_29770 PF01029 NusB family VagVIO5_29770 PF01189 16S rRNA methyltransferase RsmB/F VagVIO5_29780 PF01189 16S rRNA methyltransferase RsmB/F VagVIO5_29780 PF01029 NusB family VagVIO5_29790 PF02080 TrkA-C domain VagVIO5_29790 PF02254 TrkA-N domain VagVIO5_29800 PF02386 Cation transport protein VagVIO5_29820 PF03006 Haemolysin-III related VagVIO5_29830 PF07070 SpoOM protein VagVIO5_29850 PF06288 Protein of unknown function (DUF1040) VagVIO5_29860 PF12801 4Fe-4S binding domain VagVIO5_29860 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VagVIO5_29860 PF13746 4Fe-4S dicluster domain VagVIO5_29870 PF01636 Phosphotransferase enzyme family VagVIO5_29880 PF01323 DSBA-like thioredoxin domain VagVIO5_29890 PF01553 Acyltransferase VagVIO5_29910 PF13335 Magnesium chelatase, subunit ChlI C-terminal VagVIO5_29910 PF01078 Magnesium chelatase, subunit ChlI VagVIO5_29920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VagVIO5_29920 PF00205 Thiamine pyrophosphate enzyme, central domain VagVIO5_29920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VagVIO5_29940 PF01063 Amino-transferase class IV VagVIO5_29950 PF00920 Dehydratase family VagVIO5_29960 PF00585 C-terminal regulatory domain of Threonine dehydratase VagVIO5_29960 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_29970 PF03466 LysR substrate binding domain VagVIO5_29970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_29980 PF07690 Major Facilitator Superfamily VagVIO5_29990 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_30000 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_30010 PF12804 MobA-like NTP transferase domain VagVIO5_30010 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_30020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VagVIO5_30020 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VagVIO5_30030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VagVIO5_30030 PF02874 ATP synthase alpha/beta family, beta-barrel domain VagVIO5_30040 PF00231 ATP synthase VagVIO5_30050 PF02874 ATP synthase alpha/beta family, beta-barrel domain VagVIO5_30050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VagVIO5_30050 PF00306 ATP synthase alpha/beta chain, C terminal domain VagVIO5_30060 PF00213 ATP synthase delta (OSCP) subunit VagVIO5_30070 PF00430 ATP synthase B/B' CF(0) VagVIO5_30080 PF00137 ATP synthase subunit C VagVIO5_30090 PF00119 ATP synthase A chain VagVIO5_30100 PF03899 ATP synthase I chain VagVIO5_30110 PF17762 HTH domain found in ParB protein VagVIO5_30110 PF02195 ParB-like nuclease domain VagVIO5_30120 PF13614 AAA domain VagVIO5_30130 PF02527 rRNA small subunit methyltransferase G VagVIO5_30140 PF01134 Glucose inhibited division protein A VagVIO5_30140 PF13932 GidA associated domain VagVIO5_30150 PF00258 Flavodoxin VagVIO5_30170 PF08448 PAS fold VagVIO5_30170 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_30180 PF10509 Galactokinase galactose-binding signature VagVIO5_30180 PF08544 GHMP kinases C terminal VagVIO5_30180 PF00288 GHMP kinases N terminal domain VagVIO5_30190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VagVIO5_30190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VagVIO5_30200 PF16363 GDP-mannose 4,6 dehydratase VagVIO5_30210 PF00474 Sodium:solute symporter family VagVIO5_30220 PF16875 Glycosyl hydrolase family 36 N-terminal domain VagVIO5_30220 PF16874 Glycosyl hydrolase family 36 C-terminal domain VagVIO5_30230 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_30440 PF00589 Phage integrase family VagVIO5_30440 PF02899 Phage integrase, N-terminal SAM-like domain VagVIO5_30450 PF01926 50S ribosome-binding GTPase VagVIO5_30450 PF12631 MnmE helical domain VagVIO5_30450 PF10396 GTP-binding protein TrmE N-terminus VagVIO5_30460 PF02096 60Kd inner membrane protein VagVIO5_30460 PF14849 YidC periplasmic domain VagVIO5_30470 PF00825 Ribonuclease P VagVIO5_30480 PF00468 Ribosomal protein L34 VagVIO5_30490 PF00005 ABC transporter VagVIO5_30500 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_30510 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_30540 PF00005 ABC transporter VagVIO5_30540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_30550 PF00005 ABC transporter VagVIO5_30550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_30570 PF08719 Domain of unknown function (DUF1768) VagVIO5_30570 PF00925 GTP cyclohydrolase II VagVIO5_30590 PF00072 Response regulator receiver domain VagVIO5_30590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_30590 PF00672 HAMP domain VagVIO5_30590 PF17149 Periplasmic sensor domain found in signal transduction proteins VagVIO5_30590 PF01627 Hpt domain VagVIO5_30590 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_30610 PF01709 Transcriptional regulator VagVIO5_30620 PF01098 Cell cycle protein VagVIO5_30640 PF00005 ABC transporter VagVIO5_30680 PF13492 GAF domain VagVIO5_30680 PF07694 5TMR of 5TMR-LYT VagVIO5_30680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_30680 PF06580 Histidine kinase VagVIO5_30690 PF04397 LytTr DNA-binding domain VagVIO5_30690 PF00072 Response regulator receiver domain VagVIO5_30710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VagVIO5_30720 PF00672 HAMP domain VagVIO5_30720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_30720 PF17200 Single Cache domain 2 VagVIO5_30750 PF03616 Sodium/glutamate symporter VagVIO5_30770 PF00005 ABC transporter VagVIO5_30780 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_30780 PF00155 Aminotransferase class I and II VagVIO5_30790 PF03616 Sodium/glutamate symporter VagVIO5_30810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VagVIO5_30840 PF03466 LysR substrate binding domain VagVIO5_30840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_30850 PF02678 Pirin VagVIO5_30850 PF17954 Quercetinase C-terminal cupin domain VagVIO5_30860 PF07681 DoxX VagVIO5_30880 PF06029 AlkA N-terminal domain VagVIO5_30880 PF00730 HhH-GPD superfamily base excision DNA repair protein VagVIO5_30890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VagVIO5_30890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VagVIO5_30910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VagVIO5_30930 PF03600 Citrate transporter VagVIO5_30970 PF12697 Alpha/beta hydrolase family VagVIO5_30980 PF08329 Chitinase A, N-terminal domain VagVIO5_30980 PF00704 Glycosyl hydrolases family 18 VagVIO5_31000 PF06865 Pyrimidine/purine nucleoside phosphorylase VagVIO5_31020 PF00563 EAL domain VagVIO5_31020 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_31020 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_31030 PF01554 MatE VagVIO5_31040 PF00849 RNA pseudouridylate synthase VagVIO5_31070 PF03466 LysR substrate binding domain VagVIO5_31070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_31100 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_31100 PF17152 Periplasmic sensor domain VagVIO5_31120 PF00756 Putative esterase VagVIO5_31130 PF08240 Alcohol dehydrogenase GroES-like domain VagVIO5_31130 PF00107 Zinc-binding dehydrogenase VagVIO5_31140 PF00797 N-acetyltransferase VagVIO5_31150 PF03466 LysR substrate binding domain VagVIO5_31150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_31160 PF04954 Siderophore-interacting protein VagVIO5_31160 PF08021 Siderophore-interacting FAD-binding domain VagVIO5_31170 PF00326 Prolyl oligopeptidase family VagVIO5_31180 PF01810 LysE type translocator VagVIO5_31190 PF01037 Lrp/AsnC ligand binding domain VagVIO5_31200 PF18416 N-acetylglucosamine binding protein domain 2 VagVIO5_31200 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VagVIO5_31230 PF13599 Pentapeptide repeats (9 copies) VagVIO5_31240 PF03922 OmpW family VagVIO5_31250 PF13533 Biotin-lipoyl like VagVIO5_31260 PF07690 Major Facilitator Superfamily VagVIO5_31280 PF12706 Beta-lactamase superfamily domain VagVIO5_31300 PF01204 Trehalase VagVIO5_31310 PF01661 Macro domain VagVIO5_31320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_31330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_31330 PF03466 LysR substrate binding domain VagVIO5_31350 PF03466 LysR substrate binding domain VagVIO5_31350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_31380 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_31430 PF13556 PucR C-terminal helix-turn-helix domain VagVIO5_31430 PF05651 Putative sugar diacid recognition VagVIO5_31430 PF17853 GGDEF-like domain VagVIO5_31440 PF02447 GntP family permease VagVIO5_31450 PF02595 Glycerate kinase family VagVIO5_31460 PF00155 Aminotransferase class I and II VagVIO5_31460 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_31500 PF00583 Acetyltransferase (GNAT) family VagVIO5_31540 PF13302 Acetyltransferase (GNAT) domain VagVIO5_31550 PF03264 NapC/NirT cytochrome c family, N-terminal region VagVIO5_31560 PF00384 Molybdopterin oxidoreductase VagVIO5_31560 PF01568 Molydopterin dinucleotide binding domain VagVIO5_31560 PF18364 Molybdopterin oxidoreductase N-terminal domain VagVIO5_31580 PF02581 Thiamine monophosphate synthase VagVIO5_31590 PF02110 Hydroxyethylthiazole kinase family VagVIO5_31600 PF03070 TENA/THI-4/PQQC family VagVIO5_31610 PF09084 NMT1/THI5 like VagVIO5_31620 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_31630 PF00005 ABC transporter VagVIO5_31640 PF08543 Phosphomethylpyrimidine kinase VagVIO5_31650 PF01523 Putative modulator of DNA gyrase VagVIO5_31660 PF01523 Putative modulator of DNA gyrase VagVIO5_31670 PF04013 Putative SAM-dependent RNA methyltransferase VagVIO5_31710 PF10928 Protein of unknown function (DUF2810) VagVIO5_31720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VagVIO5_31720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VagVIO5_31740 PF03009 Glycerophosphoryl diester phosphodiesterase family VagVIO5_31750 PF00056 lactate/malate dehydrogenase, NAD binding domain VagVIO5_31750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VagVIO5_31760 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_31760 PF00072 Response regulator receiver domain VagVIO5_31770 PF00672 HAMP domain VagVIO5_31770 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_31770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_31770 PF16750 Sensor domain of 2-component histidine kinase VagVIO5_31780 PF00593 TonB dependent receptor VagVIO5_31780 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_31800 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_31810 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_31820 PF02472 Biopolymer transport protein ExbD/TolR VagVIO5_31910 PF01297 Zinc-uptake complex component A periplasmic VagVIO5_31920 PF00005 ABC transporter VagVIO5_31930 PF00950 ABC 3 transport family VagVIO5_31960 PF00326 Prolyl oligopeptidase family VagVIO5_31960 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VagVIO5_31970 PF07690 Major Facilitator Superfamily VagVIO5_31980 PF00491 Arginase family VagVIO5_31990 PF17944 Arginine decarboxylase C-terminal helical extension VagVIO5_31990 PF17810 Arginine decarboxylase helical bundle domain VagVIO5_31990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VagVIO5_32000 PF00753 Metallo-beta-lactamase superfamily VagVIO5_32010 PF18030 RimK PreATP-grasp domain VagVIO5_32010 PF08443 RimK-like ATP-grasp domain VagVIO5_32020 PF08443 RimK-like ATP-grasp domain VagVIO5_32020 PF18030 RimK PreATP-grasp domain VagVIO5_32030 PF03466 LysR substrate binding domain VagVIO5_32030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_32080 PF00232 Glycosyl hydrolase family 1 VagVIO5_32100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_32100 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_32110 PF02954 Bacterial regulatory protein, Fis family VagVIO5_32110 PF00158 Sigma-54 interaction domain VagVIO5_32110 PF00072 Response regulator receiver domain VagVIO5_32120 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_32130 PF05525 Branched-chain amino acid transport protein VagVIO5_32160 PF01266 FAD dependent oxidoreductase VagVIO5_32180 PF02322 Cytochrome bd terminal oxidase subunit II VagVIO5_32190 PF01654 Cytochrome bd terminal oxidase subunit I VagVIO5_32200 PF03116 NQR2, RnfD, RnfE family VagVIO5_32210 PF01212 Beta-eliminating lyase VagVIO5_32230 PF07670 Nucleoside recognition VagVIO5_32230 PF01773 Na+ dependent nucleoside transporter N-terminus VagVIO5_32230 PF07662 Na+ dependent nucleoside transporter C-terminus VagVIO5_32260 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_32260 PF05230 MASE2 domain VagVIO5_32290 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_32300 PF00875 DNA photolyase VagVIO5_32300 PF03441 FAD binding domain of DNA photolyase VagVIO5_32310 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VagVIO5_32330 PF01625 Peptide methionine sulfoxide reductase VagVIO5_32330 PF01641 SelR domain VagVIO5_32340 PF02566 OsmC-like protein VagVIO5_32350 PF14602 Hexapeptide repeat of succinyl-transferase VagVIO5_32350 PF12464 Maltose acetyltransferase VagVIO5_32420 PF03466 LysR substrate binding domain VagVIO5_32420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_32430 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_32460 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VagVIO5_32470 PF00194 Eukaryotic-type carbonic anhydrase VagVIO5_32480 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VagVIO5_32490 PF00657 GDSL-like Lipase/Acylhydrolase VagVIO5_32500 PF05922 Peptidase inhibitor I9 VagVIO5_32500 PF00082 Subtilase family VagVIO5_32520 PF03611 PTS system sugar-specific permease component VagVIO5_32540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VagVIO5_32550 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_32560 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_32580 PF00266 Aminotransferase class-V VagVIO5_32600 PF00005 ABC transporter VagVIO5_32610 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_32620 PF07702 UTRA domain VagVIO5_32620 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_32650 PF04393 Protein of unknown function (DUF535) VagVIO5_32670 PF01266 FAD dependent oxidoreductase VagVIO5_32680 PF18027 Cytosolic carboxypeptidase N-terminal domain VagVIO5_32680 PF00246 Zinc carboxypeptidase VagVIO5_32690 PF01389 OmpA-like transmembrane domain VagVIO5_32690 PF00691 OmpA family VagVIO5_32700 PF03466 LysR substrate binding domain VagVIO5_32700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_32720 PF03466 LysR substrate binding domain VagVIO5_32720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_32740 PF00854 POT family VagVIO5_32750 PF03313 Serine dehydratase alpha chain VagVIO5_32750 PF03315 Serine dehydratase beta chain VagVIO5_32790 PF08264 Anticodon-binding domain of tRNA VagVIO5_32790 PF00133 tRNA synthetases class I (I, L, M and V) VagVIO5_32800 PF01464 Transglycosylase SLT domain VagVIO5_32840 PF00460 Flagella basal body rod protein VagVIO5_32850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_32850 PF00460 Flagella basal body rod protein VagVIO5_32860 PF03963 Flagellar hook capping protein - N-terminal region VagVIO5_32860 PF13860 FlgD Ig-like domain VagVIO5_32860 PF13861 FlgD Tudor-like domain VagVIO5_32870 PF07559 Flagellar basal body protein FlaE VagVIO5_32870 PF00460 Flagella basal body rod protein VagVIO5_32870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_32880 PF00460 Flagella basal body rod protein VagVIO5_32880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_32890 PF00460 Flagella basal body rod protein VagVIO5_32890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_32900 PF02107 Flagellar L-ring protein VagVIO5_32910 PF02119 Flagellar P-ring protein VagVIO5_32920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VagVIO5_32920 PF10135 Rod binding protein VagVIO5_32930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VagVIO5_32930 PF00460 Flagella basal body rod protein VagVIO5_32940 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_32980 PF01070 FMN-dependent dehydrogenase VagVIO5_33010 PF00581 Rhodanese-like domain VagVIO5_33020 PF00166 Chaperonin 10 Kd subunit VagVIO5_33030 PF00118 TCP-1/cpn60 chaperonin family VagVIO5_33060 PF01810 LysE type translocator VagVIO5_33070 PF03466 LysR substrate binding domain VagVIO5_33070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_33100 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_33100 PF08359 YsiA-like protein, C-terminal region VagVIO5_33110 PF12833 Helix-turn-helix domain VagVIO5_33120 PF06751 Ethanolamine ammonia lyase large subunit (EutB) VagVIO5_33130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) VagVIO5_33140 PF13520 Amino acid permease VagVIO5_33150 PF03060 Nitronate monooxygenase VagVIO5_33160 PF07971 Glycosyl hydrolase family 92 VagVIO5_33160 PF17678 Glycosyl hydrolase family 92 N-terminal domain VagVIO5_33170 PF07971 Glycosyl hydrolase family 92 VagVIO5_33170 PF17678 Glycosyl hydrolase family 92 N-terminal domain VagVIO5_33190 PF07971 Glycosyl hydrolase family 92 VagVIO5_33190 PF17678 Glycosyl hydrolase family 92 N-terminal domain VagVIO5_33200 PF07971 Glycosyl hydrolase family 92 VagVIO5_33200 PF17678 Glycosyl hydrolase family 92 N-terminal domain VagVIO5_33230 PF01625 Peptide methionine sulfoxide reductase VagVIO5_33230 PF01641 SelR domain VagVIO5_33240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_33250 PF08220 DeoR-like helix-turn-helix domain VagVIO5_33250 PF00455 DeoR C terminal sensor domain VagVIO5_33270 PF00857 Isochorismatase family VagVIO5_33290 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VagVIO5_33290 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VagVIO5_33340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_33340 PF03466 LysR substrate binding domain VagVIO5_33370 PF06629 MltA-interacting protein MipA VagVIO5_33380 PF04170 NlpE N-terminal domain VagVIO5_33380 PF17185 NlpE C-terminal OB domain VagVIO5_33390 PF00571 CBS domain VagVIO5_33390 PF00005 ABC transporter VagVIO5_33400 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_33410 PF02001 Protein of unknown function DUF134 VagVIO5_33460 PF03764 Elongation factor G, domain IV VagVIO5_33460 PF00009 Elongation factor Tu GTP binding domain VagVIO5_33460 PF03144 Elongation factor Tu domain 2 VagVIO5_33460 PF14492 Elongation Factor G, domain II VagVIO5_33460 PF00679 Elongation factor G C-terminus VagVIO5_33470 PF13378 Enolase C-terminal domain-like VagVIO5_33470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VagVIO5_33490 PF03466 LysR substrate binding domain VagVIO5_33490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_33510 PF09278 MerR, DNA binding VagVIO5_33510 PF00376 MerR family regulatory protein VagVIO5_33560 PF13091 PLD-like domain VagVIO5_33580 PF00873 AcrB/AcrD/AcrF family VagVIO5_33630 PF08402 TOBE domain VagVIO5_33630 PF00005 ABC transporter VagVIO5_33680 PF07702 UTRA domain VagVIO5_33680 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_33690 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_33710 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 VagVIO5_33710 PF00703 Glycosyl hydrolases family 2 VagVIO5_33710 PF02837 Glycosyl hydrolases family 2, sugar binding domain VagVIO5_33710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VagVIO5_33740 PF00873 AcrB/AcrD/AcrF family VagVIO5_33750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_33760 PF03466 LysR substrate binding domain VagVIO5_33760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_33780 PF00579 tRNA synthetases class I (W and Y) VagVIO5_33790 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_33790 PF00072 Response regulator receiver domain VagVIO5_33810 PF00391 PEP-utilising enzyme, mobile domain VagVIO5_33810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VagVIO5_33810 PF02896 PEP-utilising enzyme, TIM barrel domain VagVIO5_33820 PF03618 Kinase/pyrophosphorylase VagVIO5_33830 PF17763 Glutaminase/Asparaginase C-terminal domain VagVIO5_33830 PF00710 Asparaginase, N-terminal VagVIO5_33850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_33850 PF03466 LysR substrate binding domain VagVIO5_33870 PF01810 LysE type translocator VagVIO5_33880 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) VagVIO5_33900 PF02423 Ornithine cyclodeaminase/mu-crystallin family VagVIO5_33910 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_33920 PF00202 Aminotransferase class-III VagVIO5_33930 PF00171 Aldehyde dehydrogenase family VagVIO5_33940 PF01037 Lrp/AsnC ligand binding domain VagVIO5_33950 PF03480 Bacterial extracellular solute-binding protein, family 7 VagVIO5_33960 PF03480 Bacterial extracellular solute-binding protein, family 7 VagVIO5_33970 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VagVIO5_33980 PF00557 Metallopeptidase family M24 VagVIO5_33980 PF01321 Creatinase/Prolidase N-terminal domain VagVIO5_33990 PF00155 Aminotransferase class I and II VagVIO5_33990 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_34000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VagVIO5_34010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VagVIO5_34020 PF12833 Helix-turn-helix domain VagVIO5_34050 PF08240 Alcohol dehydrogenase GroES-like domain VagVIO5_34050 PF00107 Zinc-binding dehydrogenase VagVIO5_34060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VagVIO5_34080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_34080 PF03466 LysR substrate binding domain VagVIO5_34090 PF03466 LysR substrate binding domain VagVIO5_34090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_34110 PF00270 DEAD/DEAH box helicase VagVIO5_34110 PF00271 Helicase conserved C-terminal domain VagVIO5_34150 PF00155 Aminotransferase class I and II VagVIO5_34160 PF01497 Periplasmic binding protein VagVIO5_34160 PF12833 Helix-turn-helix domain VagVIO5_34280 PF02264 LamB porin VagVIO5_34280 PF11471 Maltoporin periplasmic N-terminal extension VagVIO5_34290 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_34300 PF02378 Phosphotransferase system, EIIC VagVIO5_34300 PF00367 phosphotransferase system, EIIB VagVIO5_34310 PF00294 pfkB family carbohydrate kinase VagVIO5_34320 PF00251 Glycosyl hydrolases family 32 N-terminal domain VagVIO5_34320 PF08244 Glycosyl hydrolases family 32 C terminal VagVIO5_34330 PF02798 Glutathione S-transferase, N-terminal domain VagVIO5_34350 PF07943 Penicillin-binding protein 5, C-terminal domain VagVIO5_34350 PF00768 D-alanyl-D-alanine carboxypeptidase VagVIO5_34380 PF00462 Glutaredoxin VagVIO5_34380 PF08534 Redoxin VagVIO5_34390 PF00962 Adenosine/AMP deaminase VagVIO5_34400 PF00962 Adenosine/AMP deaminase VagVIO5_34430 PF00313 'Cold-shock' DNA-binding domain VagVIO5_34440 PF02678 Pirin VagVIO5_34440 PF05726 Pirin C-terminal cupin domain VagVIO5_34450 PF01734 Patatin-like phospholipase VagVIO5_34490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VagVIO5_34500 PF08019 Phosphoethanolamine transferase EptA/EptB VagVIO5_34500 PF00884 Sulfatase VagVIO5_34510 PF01219 Prokaryotic diacylglycerol kinase VagVIO5_34530 PF00672 HAMP domain VagVIO5_34530 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_34530 PF16527 Two-component sensor protein CpxA, periplasmic domain VagVIO5_34530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_34540 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_34540 PF00072 Response regulator receiver domain VagVIO5_34570 PF01323 DSBA-like thioredoxin domain VagVIO5_34600 PF00255 Glutathione peroxidase VagVIO5_34610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VagVIO5_34630 PF07690 Major Facilitator Superfamily VagVIO5_34650 PF01966 HD domain VagVIO5_34660 PF07969 Amidohydrolase family VagVIO5_34670 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VagVIO5_34680 PF03448 MgtE intracellular N domain VagVIO5_34680 PF01769 Divalent cation transporter VagVIO5_34680 PF00571 CBS domain VagVIO5_34690 PF03109 ABC1 family VagVIO5_34700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_34700 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_34750 PF00072 Response regulator receiver domain VagVIO5_34750 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_34760 PF00672 HAMP domain VagVIO5_34760 PF16527 Two-component sensor protein CpxA, periplasmic domain VagVIO5_34760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_34760 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_34780 PF00155 Aminotransferase class I and II VagVIO5_34780 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_34790 PF13520 Amino acid permease VagVIO5_34810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_34810 PF03466 LysR substrate binding domain VagVIO5_34850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VagVIO5_34850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VagVIO5_34860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_34860 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_34860 PF01627 Hpt domain VagVIO5_34860 PF00072 Response regulator receiver domain VagVIO5_34860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VagVIO5_34860 PF00672 HAMP domain VagVIO5_34870 PF01554 MatE VagVIO5_34880 PF04363 Protein of unknown function (DUF496) VagVIO5_34900 PF04337 Protein of unknown function, DUF480 VagVIO5_34910 PF01541 GIY-YIG catalytic domain VagVIO5_34920 PF13407 Periplasmic binding protein domain VagVIO5_34930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_34930 PF00072 Response regulator receiver domain VagVIO5_34930 PF09308 LuxQ, periplasmic VagVIO5_34930 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_34950 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_34950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_34990 PF01037 Lrp/AsnC ligand binding domain VagVIO5_35040 PF02355 Protein export membrane protein VagVIO5_35040 PF13721 SecD export protein N-terminal TM region VagVIO5_35040 PF07549 SecD/SecF GG Motif VagVIO5_35050 PF07549 SecD/SecF GG Motif VagVIO5_35050 PF02355 Protein export membrane protein VagVIO5_35070 PF01810 LysE type translocator VagVIO5_35080 PF00106 short chain dehydrogenase VagVIO5_35090 PF00108 Thiolase, N-terminal domain VagVIO5_35090 PF02803 Thiolase, C-terminal domain VagVIO5_35110 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VagVIO5_35130 PF03264 NapC/NirT cytochrome c family, N-terminal region VagVIO5_35140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VagVIO5_35150 PF01568 Molydopterin dinucleotide binding domain VagVIO5_35150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VagVIO5_35150 PF00384 Molybdopterin oxidoreductase VagVIO5_35170 PF13187 4Fe-4S dicluster domain VagVIO5_35170 PF12838 4Fe-4S dicluster domain VagVIO5_35180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VagVIO5_35180 PF07730 Histidine kinase VagVIO5_35180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_35180 PF00672 HAMP domain VagVIO5_35190 PF00072 Response regulator receiver domain VagVIO5_35190 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_35220 PF07687 Peptidase dimerisation domain VagVIO5_35220 PF01546 Peptidase family M20/M25/M40 VagVIO5_35230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VagVIO5_35240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_35250 PF00873 AcrB/AcrD/AcrF family VagVIO5_35260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_35260 PF00672 HAMP domain VagVIO5_35260 PF17200 Single Cache domain 2 VagVIO5_35270 PF00472 RF-1 domain VagVIO5_35280 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_35290 PF00691 OmpA family VagVIO5_35290 PF01389 OmpA-like transmembrane domain VagVIO5_35300 PF00793 DAHP synthetase I family VagVIO5_35310 PF07690 Major Facilitator Superfamily VagVIO5_35320 PF08447 PAS fold VagVIO5_35320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_35330 PF02780 Transketolase, C-terminal domain VagVIO5_35330 PF02779 Transketolase, pyrimidine binding domain VagVIO5_35330 PF00456 Transketolase, thiamine diphosphate binding domain VagVIO5_35340 PF00923 Transaldolase/Fructose-6-phosphate aldolase VagVIO5_35360 PF08329 Chitinase A, N-terminal domain VagVIO5_35360 PF00704 Glycosyl hydrolases family 18 VagVIO5_35370 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_35370 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_35370 PF00563 EAL domain VagVIO5_35380 PF00581 Rhodanese-like domain VagVIO5_35420 PF00899 ThiF family VagVIO5_35430 PF03453 MoeA N-terminal region (domain I and II) VagVIO5_35430 PF03454 MoeA C-terminal region (domain IV) VagVIO5_35430 PF00994 Probable molybdopterin binding domain VagVIO5_35440 PF01227 GTP cyclohydrolase I VagVIO5_35450 PF01566 Natural resistance-associated macrophage protein VagVIO5_35470 PF00654 Voltage gated chloride channel VagVIO5_35500 PF00248 Aldo/keto reductase family VagVIO5_35510 PF00072 Response regulator receiver domain VagVIO5_35530 PF01256 Carbohydrate kinase VagVIO5_35530 PF03853 YjeF-related protein N-terminus VagVIO5_35540 PF00478 IMP dehydrogenase / GMP reductase domain VagVIO5_35550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VagVIO5_35560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VagVIO5_35560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VagVIO5_35560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VagVIO5_35570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_35570 PF03466 LysR substrate binding domain VagVIO5_35580 PF01551 Peptidase family M23 VagVIO5_35580 PF08525 Opacity-associated protein A N-terminal motif VagVIO5_35580 PF01476 LysM domain VagVIO5_35640 PF00158 Sigma-54 interaction domain VagVIO5_35640 PF00072 Response regulator receiver domain VagVIO5_35640 PF02954 Bacterial regulatory protein, Fis family VagVIO5_35650 PF17871 AAA lid domain VagVIO5_35650 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_35650 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_35650 PF10431 C-terminal, D2-small domain, of ClpB protein VagVIO5_35660 PF05638 Type VI secretion system effector, Hcp VagVIO5_35670 PF04717 Type VI secretion system, phage-baseplate injector VagVIO5_35720 PF00069 Protein kinase domain VagVIO5_35790 PF01037 Lrp/AsnC ligand binding domain VagVIO5_35920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VagVIO5_35930 PF07690 Major Facilitator Superfamily VagVIO5_35950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_35950 PF03466 LysR substrate binding domain VagVIO5_35960 PF00106 short chain dehydrogenase VagVIO5_35970 PF00582 Universal stress protein family VagVIO5_35990 PF13244 Domain of unknown function (DUF4040) VagVIO5_35990 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VagVIO5_35990 PF00361 Proton-conducting membrane transporter VagVIO5_35990 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VagVIO5_36030 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VagVIO5_36040 PF03334 Na+/H+ antiporter subunit VagVIO5_36050 PF00501 AMP-binding enzyme VagVIO5_36050 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_36060 PF01012 Electron transfer flavoprotein domain VagVIO5_36060 PF00766 Electron transfer flavoprotein FAD-binding domain VagVIO5_36070 PF01012 Electron transfer flavoprotein domain VagVIO5_36090 PF01348 Type II intron maturase VagVIO5_36090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VagVIO5_36100 PF12399 Branched-chain amino acid ATP-binding cassette transporter VagVIO5_36100 PF00005 ABC transporter VagVIO5_36150 PF00005 ABC transporter VagVIO5_36160 PF00501 AMP-binding enzyme VagVIO5_36160 PF14535 AMP-binding enzyme C-terminal domain VagVIO5_36180 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_36190 PF00106 short chain dehydrogenase VagVIO5_36200 PF00205 Thiamine pyrophosphate enzyme, central domain VagVIO5_36200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VagVIO5_36200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VagVIO5_36210 PF03306 Alpha-acetolactate decarboxylase VagVIO5_36220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_36220 PF03466 LysR substrate binding domain VagVIO5_36250 PF13087 AAA domain VagVIO5_36250 PF13195 Protein of unknown function (DUF4011) VagVIO5_36250 PF13195 Protein of unknown function (DUF4011) VagVIO5_36250 PF13086 AAA domain VagVIO5_36250 PF13087 AAA domain VagVIO5_36250 PF13086 AAA domain VagVIO5_36270 PF02567 Phenazine biosynthesis-like protein VagVIO5_36290 PF02322 Cytochrome bd terminal oxidase subunit II VagVIO5_36300 PF01654 Cytochrome bd terminal oxidase subunit I VagVIO5_36310 PF00392 Bacterial regulatory proteins, gntR family VagVIO5_36310 PF00155 Aminotransferase class I and II VagVIO5_36350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_36350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VagVIO5_36350 PF01627 Hpt domain VagVIO5_36350 PF00072 Response regulator receiver domain VagVIO5_36350 PF00672 HAMP domain VagVIO5_36350 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_36360 PF00682 HMGL-like VagVIO5_36370 PF00364 Biotin-requiring enzyme VagVIO5_36370 PF00289 Biotin carboxylase, N-terminal domain VagVIO5_36370 PF18140 Propionyl-coenzyme A carboxylase BT domain VagVIO5_36370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VagVIO5_36370 PF02785 Biotin carboxylase C-terminal domain VagVIO5_36380 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_36390 PF01039 Carboxyl transferase domain VagVIO5_36400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VagVIO5_36400 PF02770 Acyl-CoA dehydrogenase, middle domain VagVIO5_36400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VagVIO5_36410 PF09278 MerR, DNA binding VagVIO5_36410 PF00376 MerR family regulatory protein VagVIO5_36420 PF02803 Thiolase, C-terminal domain VagVIO5_36420 PF00108 Thiolase, N-terminal domain VagVIO5_36430 PF00171 Aldehyde dehydrogenase family VagVIO5_36440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VagVIO5_36440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VagVIO5_36440 PF02770 Acyl-CoA dehydrogenase, middle domain VagVIO5_36450 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_36470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VagVIO5_36470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VagVIO5_36490 PF00072 Response regulator receiver domain VagVIO5_36490 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_36500 PF13977 BetI-type transcriptional repressor, C-terminal VagVIO5_36500 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_36510 PF00171 Aldehyde dehydrogenase family VagVIO5_36520 PF00732 GMC oxidoreductase VagVIO5_36520 PF05199 GMC oxidoreductase VagVIO5_36530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VagVIO5_36540 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_36550 PF00571 CBS domain VagVIO5_36550 PF00005 ABC transporter VagVIO5_36560 PF00881 Nitroreductase family VagVIO5_36580 PF16200 C-terminal region of band_7 VagVIO5_36580 PF01145 SPFH domain / Band 7 family VagVIO5_36610 PF00563 EAL domain VagVIO5_36610 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_36610 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_36610 PF13188 PAS domain VagVIO5_36630 PF00034 Cytochrome c VagVIO5_36630 PF03150 Di-haem cytochrome c peroxidase VagVIO5_36640 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_36640 PF00072 Response regulator receiver domain VagVIO5_36640 PF09308 LuxQ, periplasmic VagVIO5_36640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_36660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VagVIO5_36660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VagVIO5_36680 PF04116 Fatty acid hydroxylase superfamily VagVIO5_36750 PF00563 EAL domain VagVIO5_36750 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_36760 PF05025 RbsD / FucU transport protein family VagVIO5_36770 PF00005 ABC transporter VagVIO5_36780 PF02653 Branched-chain amino acid transport system / permease component VagVIO5_36790 PF13407 Periplasmic binding protein domain VagVIO5_36800 PF00294 pfkB family carbohydrate kinase VagVIO5_36810 PF00356 Bacterial regulatory proteins, lacI family VagVIO5_36830 PF04973 Nicotinamide mononucleotide transporter VagVIO5_36840 PF01048 Phosphorylase superfamily VagVIO5_36860 PF01497 Periplasmic binding protein VagVIO5_36870 PF01032 FecCD transport family VagVIO5_36880 PF01032 FecCD transport family VagVIO5_36890 PF00005 ABC transporter VagVIO5_36900 PF13411 MerR HTH family regulatory protein VagVIO5_36910 PF12833 Helix-turn-helix domain VagVIO5_36920 PF00593 TonB dependent receptor VagVIO5_36920 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_36980 PF12805 FUSC-like inner membrane protein yccS VagVIO5_36990 PF13361 UvrD-like helicase C-terminal domain VagVIO5_36990 PF00580 UvrD/REP helicase N-terminal domain VagVIO5_36990 PF12462 DNA helicase IV / RNA helicase N terminal VagVIO5_37000 PF02142 MGS-like domain VagVIO5_37010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VagVIO5_37020 PF00672 HAMP domain VagVIO5_37020 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_37020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_37020 PF00072 Response regulator receiver domain VagVIO5_37020 PF01627 Hpt domain VagVIO5_37050 PF00072 Response regulator receiver domain VagVIO5_37050 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_37060 PF00884 Sulfatase VagVIO5_37070 PF03466 LysR substrate binding domain VagVIO5_37070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_37080 PF00884 Sulfatase VagVIO5_37080 PF16385 Domain of unknown function VagVIO5_37090 PF04055 Radical SAM superfamily VagVIO5_37090 PF13186 Iron-sulfur cluster-binding domain VagVIO5_37100 PF17863 AAA lid domain VagVIO5_37100 PF07726 ATPase family associated with various cellular activities (AAA) VagVIO5_37130 PF00092 von Willebrand factor type A domain VagVIO5_37160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VagVIO5_37160 PF01872 RibD C-terminal domain VagVIO5_37170 PF03466 LysR substrate binding domain VagVIO5_37170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_37180 PF00781 Diacylglycerol kinase catalytic domain VagVIO5_37190 PF04076 Bacterial OB fold (BOF) protein VagVIO5_37210 PF18081 Fanconi anemia-associated nuclease SAP domain VagVIO5_37210 PF08774 VRR-NUC domain VagVIO5_37250 PF01435 Peptidase family M48 VagVIO5_37260 PF04011 LemA family VagVIO5_37270 PF03606 C4-dicarboxylate anaerobic carrier VagVIO5_37290 PF00814 Glycoprotease family VagVIO5_37290 PF00583 Acetyltransferase (GNAT) family VagVIO5_37310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_37310 PF00072 Response regulator receiver domain VagVIO5_37320 PF00155 Aminotransferase class I and II VagVIO5_37330 PF01926 50S ribosome-binding GTPase VagVIO5_37340 PF00563 EAL domain VagVIO5_37340 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_37340 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_37350 PF08448 PAS fold VagVIO5_37350 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_37370 PF00072 Response regulator receiver domain VagVIO5_37370 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_37380 PF01584 CheW-like domain VagVIO5_37380 PF00072 Response regulator receiver domain VagVIO5_37410 PF00892 EamA-like transporter family VagVIO5_37450 PF03413 Peptidase propeptide and YPEB domain VagVIO5_37450 PF04151 Bacterial pre-peptidase C-terminal domain VagVIO5_37450 PF02868 Thermolysin metallopeptidase, alpha-helical domain VagVIO5_37450 PF01447 Thermolysin metallopeptidase, catalytic domain VagVIO5_37450 PF07504 Fungalysin/Thermolysin Propeptide Motif VagVIO5_37460 PF00893 Small Multidrug Resistance protein VagVIO5_37470 PF00892 EamA-like transporter family VagVIO5_37500 PF00171 Aldehyde dehydrogenase family VagVIO5_37510 PF00939 Sodium:sulfate symporter transmembrane region VagVIO5_37520 PF00989 PAS fold VagVIO5_37520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_37520 PF17203 Single cache domain 3 VagVIO5_37520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VagVIO5_37530 PF00072 Response regulator receiver domain VagVIO5_37530 PF12431 Transcriptional regulator VagVIO5_37550 PF01645 Conserved region in glutamate synthase VagVIO5_37550 PF13187 4Fe-4S dicluster domain VagVIO5_37560 PF00141 Peroxidase VagVIO5_37570 PF09722 Protein of unknown function (DUF2384) VagVIO5_37590 PF01757 Acyltransferase family VagVIO5_37610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VagVIO5_37620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_37660 PF03448 MgtE intracellular N domain VagVIO5_37660 PF01769 Divalent cation transporter VagVIO5_37660 PF00571 CBS domain VagVIO5_37700 PF01327 Polypeptide deformylase VagVIO5_37710 PF00376 MerR family regulatory protein VagVIO5_37710 PF09278 MerR, DNA binding VagVIO5_37730 PF02253 Phospholipase A1 VagVIO5_37770 PF00664 ABC transporter transmembrane region VagVIO5_37770 PF00005 ABC transporter VagVIO5_37780 PF07733 Bacterial DNA polymerase III alpha NTPase domain VagVIO5_37780 PF00929 Exonuclease VagVIO5_37780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VagVIO5_37780 PF02811 PHP domain VagVIO5_37780 PF11490 DNA polymerase III polC-type N-terminus II VagVIO5_37780 PF14579 Helix-hairpin-helix motif VagVIO5_37830 PF12833 Helix-turn-helix domain VagVIO5_37840 PF02627 Carboxymuconolactone decarboxylase family VagVIO5_37850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_37860 PF00665 Integrase core domain VagVIO5_37870 PF01527 Transposase VagVIO5_37890 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_37890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_37890 PF00672 HAMP domain VagVIO5_37900 PF14532 Sigma-54 interaction domain VagVIO5_37900 PF00072 Response regulator receiver domain VagVIO5_37900 PF02954 Bacterial regulatory protein, Fis family VagVIO5_37920 PF00465 Iron-containing alcohol dehydrogenase VagVIO5_37930 PF06719 AraC-type transcriptional regulator N-terminus VagVIO5_37930 PF12833 Helix-turn-helix domain VagVIO5_37940 PF06483 Chitinase C VagVIO5_37940 PF00704 Glycosyl hydrolases family 18 VagVIO5_37950 PF00483 Nucleotidyl transferase VagVIO5_37960 PF01268 Formate--tetrahydrofolate ligase VagVIO5_37970 PF00294 pfkB family carbohydrate kinase VagVIO5_38010 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_38020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_38040 PF04336 Acyl carrier protein phosphodiesterase VagVIO5_38050 PF00271 Helicase conserved C-terminal domain VagVIO5_38050 PF00270 DEAD/DEAH box helicase VagVIO5_38060 PF12792 CSS motif domain associated with EAL VagVIO5_38060 PF00563 EAL domain VagVIO5_38090 PF01292 Prokaryotic cytochrome b561 VagVIO5_38100 PF04264 YceI-like domain VagVIO5_38110 PF01226 Formate/nitrite transporter VagVIO5_38120 PF03466 LysR substrate binding domain VagVIO5_38120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_38130 PF06496 Protein of unknown function (DUF1097) VagVIO5_38140 PF11398 Protein of unknown function (DUF2813) VagVIO5_38150 PF00149 Calcineurin-like phosphoesterase VagVIO5_38150 PF02872 5'-nucleotidase, C-terminal domain VagVIO5_38170 PF03741 Integral membrane protein TerC family VagVIO5_38210 PF12262 Bacterial virulence factor lipase N-terminal VagVIO5_38220 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VagVIO5_38250 PF03061 Thioesterase superfamily VagVIO5_38270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_38270 PF12793 Sugar transport-related sRNA regulator N-term VagVIO5_38320 PF00684 DnaJ central domain VagVIO5_38320 PF00226 DnaJ domain VagVIO5_38320 PF01556 DnaJ C terminal domain VagVIO5_38340 PF00563 EAL domain VagVIO5_38340 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_38340 PF00498 FHA domain VagVIO5_38350 PF07055 Enoyl reductase FAD binding domain VagVIO5_38350 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VagVIO5_38350 PF12241 Trans-2-enoyl-CoA reductase catalytic region VagVIO5_38360 PF13472 GDSL-like Lipase/Acylhydrolase family VagVIO5_38370 PF00005 ABC transporter VagVIO5_38400 PF02626 Carboxyltransferase domain, subdomain A and B VagVIO5_38410 PF02682 Carboxyltransferase domain, subdomain C and D VagVIO5_38420 PF03746 LamB/YcsF family VagVIO5_38430 PF08448 PAS fold VagVIO5_38430 PF08447 PAS fold VagVIO5_38430 PF05231 MASE1 VagVIO5_38430 PF13426 PAS domain VagVIO5_38430 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_38430 PF00563 EAL domain VagVIO5_38440 PF16363 GDP-mannose 4,6 dehydratase VagVIO5_38450 PF04886 PT repeat VagVIO5_38450 PF00593 TonB dependent receptor VagVIO5_38450 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_38460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_38460 PF03466 LysR substrate binding domain VagVIO5_38470 PF13607 Succinyl-CoA ligase like flavodoxin domain VagVIO5_38470 PF00583 Acetyltransferase (GNAT) family VagVIO5_38470 PF13380 CoA binding domain VagVIO5_38480 PF05036 Sporulation related domain VagVIO5_38490 PF01820 D-ala D-ala ligase N-terminus VagVIO5_38490 PF07478 D-ala D-ala ligase C-terminus VagVIO5_38510 PF01253 Translation initiation factor SUI1 VagVIO5_38530 PF05707 Zonular occludens toxin (Zot) VagVIO5_38630 PF05707 Zonular occludens toxin (Zot) VagVIO5_38750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_38750 PF03466 LysR substrate binding domain VagVIO5_38770 PF00582 Universal stress protein family VagVIO5_38780 PF03701 Uncharacterised protein family (UPF0181) VagVIO5_38810 PF00072 Response regulator receiver domain VagVIO5_38810 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_38830 PF02233 NAD(P) transhydrogenase beta subunit VagVIO5_38840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VagVIO5_38840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VagVIO5_38840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VagVIO5_38870 PF00072 Response regulator receiver domain VagVIO5_38870 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_38890 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_38890 PF01590 GAF domain VagVIO5_38890 PF00563 EAL domain VagVIO5_38890 PF00360 Phytochrome region VagVIO5_38910 PF03459 TOBE domain VagVIO5_38910 PF00005 ABC transporter VagVIO5_38920 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_38940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VagVIO5_38940 PF07685 CobB/CobQ-like glutamine amidotransferase domain VagVIO5_38970 PF18030 RimK PreATP-grasp domain VagVIO5_38970 PF08443 RimK-like ATP-grasp domain VagVIO5_38980 PF00155 Aminotransferase class I and II VagVIO5_38990 PF12833 Helix-turn-helix domain VagVIO5_38990 PF12852 Cupin VagVIO5_39000 PF01554 MatE VagVIO5_39020 PF13597 Anaerobic ribonucleoside-triphosphate reductase VagVIO5_39020 PF03477 ATP cone domain VagVIO5_39040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_39050 PF00873 AcrB/AcrD/AcrF family VagVIO5_39070 PF04143 Sulphur transport VagVIO5_39100 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_39100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VagVIO5_39110 PF01177 Asp/Glu/Hydantoin racemase VagVIO5_39120 PF02567 Phenazine biosynthesis-like protein VagVIO5_39140 PF00384 Molybdopterin oxidoreductase VagVIO5_39150 PF03466 LysR substrate binding domain VagVIO5_39150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_39160 PF02634 FdhD/NarQ family VagVIO5_39170 PF07690 Major Facilitator Superfamily VagVIO5_39180 PF00072 Response regulator receiver domain VagVIO5_39180 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_39190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_39190 PF07730 Histidine kinase VagVIO5_39190 PF05231 MASE1 VagVIO5_39200 PF07690 Major Facilitator Superfamily VagVIO5_39210 PF01238 Phosphomannose isomerase type I VagVIO5_39250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VagVIO5_39250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VagVIO5_39260 PF00085 Thioredoxin VagVIO5_39270 PF07690 Major Facilitator Superfamily VagVIO5_39280 PF11756 Nitrous oxide-stimulated promoter VagVIO5_39310 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_39310 PF00593 TonB dependent receptor VagVIO5_39330 PF03605 Anaerobic c4-dicarboxylate membrane transporter VagVIO5_39360 PF10414 Sirohaem synthase dimerisation region VagVIO5_39360 PF14824 Sirohaem biosynthesis protein central VagVIO5_39360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VagVIO5_39370 PF01226 Formate/nitrite transporter VagVIO5_39380 PF13806 Rieske-like [2Fe-2S] domain VagVIO5_39390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VagVIO5_39390 PF04324 BFD-like [2Fe-2S] binding domain VagVIO5_39390 PF18267 Rubredoxin NAD+ reductase C-terminal domain VagVIO5_39390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VagVIO5_39390 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_39400 PF14760 Rnk N-terminus VagVIO5_39400 PF01272 Transcription elongation factor, GreA/GreB, C-term VagVIO5_39410 PF00563 EAL domain VagVIO5_39410 PF13426 PAS domain VagVIO5_39410 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_39490 PF09154 Domain of unknown function (DUF1939) VagVIO5_39490 PF00128 Alpha amylase, catalytic domain VagVIO5_39500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_39500 PF00672 HAMP domain VagVIO5_39510 PF00842 Alanine racemase, C-terminal domain VagVIO5_39510 PF01168 Alanine racemase, N-terminal domain VagVIO5_39540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_39540 PF03466 LysR substrate binding domain VagVIO5_39550 PF14031 Putative serine dehydratase domain VagVIO5_39550 PF01168 Alanine racemase, N-terminal domain VagVIO5_39560 PF02423 Ornithine cyclodeaminase/mu-crystallin family VagVIO5_39580 PF09330 D-lactate dehydrogenase, membrane binding VagVIO5_39580 PF01565 FAD binding domain VagVIO5_39590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_39590 PF03466 LysR substrate binding domain VagVIO5_39600 PF05762 VWA domain containing CoxE-like protein VagVIO5_39610 PF07728 AAA domain (dynein-related subfamily) VagVIO5_39610 PF12592 Protein of unknown function (DUF3763) VagVIO5_39610 PF17868 AAA lid domain VagVIO5_39630 PF01212 Beta-eliminating lyase VagVIO5_39640 PF00034 Cytochrome c VagVIO5_39650 PF03606 C4-dicarboxylate anaerobic carrier VagVIO5_39670 PF08212 Lipocalin-like domain VagVIO5_39690 PF13476 AAA domain VagVIO5_39700 PF00149 Calcineurin-like phosphoesterase VagVIO5_39700 PF12320 Type 5 capsule protein repressor C-terminal domain VagVIO5_39730 PF16671 Actin cross-linking domain VagVIO5_39730 PF04717 Type VI secretion system, phage-baseplate injector VagVIO5_39750 PF07724 AAA domain (Cdc48 subfamily) VagVIO5_39750 PF10431 C-terminal, D2-small domain, of ClpB protein VagVIO5_39750 PF00004 ATPase family associated with various cellular activities (AAA) VagVIO5_39750 PF17871 AAA lid domain VagVIO5_39870 PF00691 OmpA family VagVIO5_39870 PF13677 Membrane MotB of proton-channel complex MotA/MotB VagVIO5_39910 PF03793 PASTA domain VagVIO5_39910 PF00069 Protein kinase domain VagVIO5_39950 PF00072 Response regulator receiver domain VagVIO5_39950 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_39970 PF00043 Glutathione S-transferase, C-terminal domain VagVIO5_39970 PF13417 Glutathione S-transferase, N-terminal domain VagVIO5_39980 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_39980 PF08361 MAATS-type transcriptional repressor, C-terminal region VagVIO5_40010 PF18267 Rubredoxin NAD+ reductase C-terminal domain VagVIO5_40010 PF04324 BFD-like [2Fe-2S] binding domain VagVIO5_40010 PF13806 Rieske-like [2Fe-2S] domain VagVIO5_40010 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_40010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VagVIO5_40010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VagVIO5_40020 PF00005 ABC transporter VagVIO5_40030 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_40040 PF00005 ABC transporter VagVIO5_40050 PF03861 ANTAR domain VagVIO5_40050 PF00072 Response regulator receiver domain VagVIO5_40060 PF01738 Dienelactone hydrolase family VagVIO5_40070 PF00591 Glycosyl transferase family, a/b domain VagVIO5_40070 PF02885 Glycosyl transferase family, helical bundle domain VagVIO5_40080 PF14824 Sirohaem biosynthesis protein central VagVIO5_40080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VagVIO5_40080 PF10414 Sirohaem synthase dimerisation region VagVIO5_40090 PF00384 Molybdopterin oxidoreductase VagVIO5_40090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VagVIO5_40090 PF01568 Molydopterin dinucleotide binding domain VagVIO5_40110 PF03222 Tryptophan/tyrosine permease family VagVIO5_40130 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_40130 PF07694 5TMR of 5TMR-LYT VagVIO5_40150 PF00082 Subtilase family VagVIO5_40150 PF01483 Proprotein convertase P-domain VagVIO5_40190 PF00072 Response regulator receiver domain VagVIO5_40190 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_40230 PF04314 Copper chaperone PCu(A)C VagVIO5_40240 PF00012 Hsp70 protein VagVIO5_40270 PF00676 Dehydrogenase E1 component VagVIO5_40280 PF02779 Transketolase, pyrimidine binding domain VagVIO5_40280 PF02780 Transketolase, C-terminal domain VagVIO5_40290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VagVIO5_40290 PF02817 e3 binding domain VagVIO5_40290 PF00364 Biotin-requiring enzyme VagVIO5_40300 PF00766 Electron transfer flavoprotein FAD-binding domain VagVIO5_40300 PF01012 Electron transfer flavoprotein domain VagVIO5_40340 PF01389 OmpA-like transmembrane domain VagVIO5_40340 PF00691 OmpA family VagVIO5_40370 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_40380 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_40390 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_40400 PF00005 ABC transporter VagVIO5_40460 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_40480 PF00171 Aldehyde dehydrogenase family VagVIO5_40510 PF01565 FAD binding domain VagVIO5_40510 PF08031 Berberine and berberine like VagVIO5_40520 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_40520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VagVIO5_40540 PF01040 UbiA prenyltransferase family VagVIO5_40560 PF00510 Cytochrome c oxidase subunit III VagVIO5_40570 PF00115 Cytochrome C and Quinol oxidase polypeptide I VagVIO5_40580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VagVIO5_40580 PF06481 COX Aromatic Rich Motif VagVIO5_40600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VagVIO5_40600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VagVIO5_40610 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_40620 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_40630 PF02770 Acyl-CoA dehydrogenase, middle domain VagVIO5_40630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VagVIO5_40630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VagVIO5_40640 PF00171 Aldehyde dehydrogenase family VagVIO5_40650 PF00108 Thiolase, N-terminal domain VagVIO5_40650 PF02803 Thiolase, C-terminal domain VagVIO5_40660 PF09278 MerR, DNA binding VagVIO5_40660 PF00376 MerR family regulatory protein VagVIO5_40670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VagVIO5_40670 PF02770 Acyl-CoA dehydrogenase, middle domain VagVIO5_40670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VagVIO5_40680 PF01039 Carboxyl transferase domain VagVIO5_40690 PF00378 Enoyl-CoA hydratase/isomerase VagVIO5_40700 PF00682 HMGL-like VagVIO5_40710 PF10063 Uncharacterized integral membrane protein (DUF2301) VagVIO5_40730 PF02913 FAD linked oxidases, C-terminal domain VagVIO5_40730 PF01565 FAD binding domain VagVIO5_40730 PF13183 4Fe-4S dicluster domain VagVIO5_40740 PF04909 Amidohydrolase VagVIO5_40750 PF00561 alpha/beta hydrolase fold VagVIO5_40760 PF12833 Helix-turn-helix domain VagVIO5_40760 PF01965 DJ-1/PfpI family VagVIO5_40790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VagVIO5_40800 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_40810 PF00571 CBS domain VagVIO5_40810 PF00005 ABC transporter VagVIO5_40820 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_40830 PF08447 PAS fold VagVIO5_40830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_40830 PF13426 PAS domain VagVIO5_40840 PF00871 Acetokinase family VagVIO5_40850 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_40850 PF00563 EAL domain VagVIO5_40850 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_40860 PF03880 DbpA RNA binding domain VagVIO5_40860 PF00271 Helicase conserved C-terminal domain VagVIO5_40860 PF00270 DEAD/DEAH box helicase VagVIO5_40870 PF08206 Ribonuclease B OB domain VagVIO5_40870 PF00773 RNB domain VagVIO5_40870 PF00575 S1 RNA binding domain VagVIO5_40880 PF12833 Helix-turn-helix domain VagVIO5_40900 PF12849 PBP superfamily domain VagVIO5_40910 PF01575 MaoC like domain VagVIO5_40920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_40920 PF08447 PAS fold VagVIO5_40930 PF00005 ABC transporter VagVIO5_40940 PF00563 EAL domain VagVIO5_40940 PF12792 CSS motif domain associated with EAL VagVIO5_40990 PF00270 DEAD/DEAH box helicase VagVIO5_40990 PF00271 Helicase conserved C-terminal domain VagVIO5_41000 PF02492 CobW/HypB/UreG, nucleotide-binding domain VagVIO5_41000 PF07683 Cobalamin synthesis protein cobW C-terminal domain VagVIO5_41020 PF01470 Pyroglutamyl peptidase VagVIO5_41040 PF00313 'Cold-shock' DNA-binding domain VagVIO5_41050 PF08461 Ribonuclease R winged-helix domain VagVIO5_41050 PF00773 RNB domain VagVIO5_41050 PF08206 Ribonuclease B OB domain VagVIO5_41050 PF17876 Cold shock domain VagVIO5_41050 PF00575 S1 RNA binding domain VagVIO5_41060 PF00291 Pyridoxal-phosphate dependent enzyme VagVIO5_41080 PF09905 DNA-binding protein VF530 VagVIO5_41090 PF00271 Helicase conserved C-terminal domain VagVIO5_41090 PF00270 DEAD/DEAH box helicase VagVIO5_41110 PF01925 Sulfite exporter TauE/SafE VagVIO5_41130 PF03466 LysR substrate binding domain VagVIO5_41130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_41140 PF00892 EamA-like transporter family VagVIO5_41150 PF01276 Orn/Lys/Arg decarboxylase, major domain VagVIO5_41150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VagVIO5_41160 PF00857 Isochorismatase family VagVIO5_41180 PF05922 Peptidase inhibitor I9 VagVIO5_41180 PF00082 Subtilase family VagVIO5_41180 PF04151 Bacterial pre-peptidase C-terminal domain VagVIO5_41210 PF12843 Putative quorum-sensing-regulated virulence factor VagVIO5_41250 PF01329 Pterin 4 alpha carbinolamine dehydratase VagVIO5_41260 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VagVIO5_41270 PF00501 AMP-binding enzyme VagVIO5_41270 PF13193 AMP-binding enzyme C-terminal domain VagVIO5_41290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_41290 PF03466 LysR substrate binding domain VagVIO5_41310 PF00892 EamA-like transporter family VagVIO5_41340 PF00465 Iron-containing alcohol dehydrogenase VagVIO5_41350 PF07995 Glucose / Sorbosone dehydrogenase VagVIO5_41370 PF00210 Ferritin-like domain VagVIO5_41380 PF00672 HAMP domain VagVIO5_41380 PF17200 Single Cache domain 2 VagVIO5_41380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_41400 PF12704 MacB-like periplasmic core domain VagVIO5_41400 PF02687 FtsX-like permease family VagVIO5_41400 PF00005 ABC transporter VagVIO5_41410 PF02687 FtsX-like permease family VagVIO5_41410 PF12704 MacB-like periplasmic core domain VagVIO5_41410 PF00005 ABC transporter VagVIO5_41440 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_41450 PF03889 Alternative ribosome-rescue factor A VagVIO5_41460 PF00313 'Cold-shock' DNA-binding domain VagVIO5_41500 PF13488 Glycine zipper VagVIO5_41500 PF00691 OmpA family VagVIO5_41520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VagVIO5_41520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VagVIO5_41530 PF01040 UbiA prenyltransferase family VagVIO5_41540 PF02628 Cytochrome oxidase assembly protein VagVIO5_41570 PF00510 Cytochrome c oxidase subunit III VagVIO5_41580 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VagVIO5_41590 PF00115 Cytochrome C and Quinol oxidase polypeptide I VagVIO5_41600 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VagVIO5_41600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VagVIO5_41610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VagVIO5_41610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VagVIO5_41610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VagVIO5_41610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VagVIO5_41630 PF01810 LysE type translocator VagVIO5_41640 PF12833 Helix-turn-helix domain VagVIO5_41670 PF01557 Fumarylacetoacetate (FAA) hydrolase family VagVIO5_41710 PF00892 EamA-like transporter family VagVIO5_41720 PF00462 Glutaredoxin VagVIO5_41750 PF07690 Major Facilitator Superfamily VagVIO5_41760 PF03466 LysR substrate binding domain VagVIO5_41760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_41770 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_41770 PF08448 PAS fold VagVIO5_41770 PF00563 EAL domain VagVIO5_41770 PF08447 PAS fold VagVIO5_41780 PF01551 Peptidase family M23 VagVIO5_41780 PF01476 LysM domain VagVIO5_41780 PF08525 Opacity-associated protein A N-terminal motif VagVIO5_41840 PF00672 HAMP domain VagVIO5_41840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_41840 PF02743 Cache domain VagVIO5_41860 PF03222 Tryptophan/tyrosine permease family VagVIO5_41920 PF08240 Alcohol dehydrogenase GroES-like domain VagVIO5_41920 PF00107 Zinc-binding dehydrogenase VagVIO5_41930 PF02378 Phosphotransferase system, EIIC VagVIO5_41930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VagVIO5_41940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VagVIO5_41970 PF01758 Sodium Bile acid symporter family VagVIO5_41990 PF01161 Phosphatidylethanolamine-binding protein VagVIO5_42000 PF02567 Phenazine biosynthesis-like protein VagVIO5_42010 PF10282 Lactonase, 7-bladed beta-propeller VagVIO5_42030 PF00005 ABC transporter VagVIO5_42070 PF01568 Molydopterin dinucleotide binding domain VagVIO5_42070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VagVIO5_42070 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VagVIO5_42070 PF00384 Molybdopterin oxidoreductase VagVIO5_42070 PF12838 4Fe-4S dicluster domain VagVIO5_42110 PF00873 AcrB/AcrD/AcrF family VagVIO5_42150 PF17151 Periplasmic sensor domain VagVIO5_42150 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_42170 PF13302 Acetyltransferase (GNAT) domain VagVIO5_42190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VagVIO5_42200 PF00873 AcrB/AcrD/AcrF family VagVIO5_42210 PF13533 Biotin-lipoyl like VagVIO5_42240 PF00326 Prolyl oligopeptidase family VagVIO5_42240 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VagVIO5_42250 PF12848 ABC transporter VagVIO5_42250 PF16326 ABC transporter C-terminal domain VagVIO5_42250 PF00005 ABC transporter VagVIO5_42260 PF00582 Universal stress protein family VagVIO5_42270 PF02525 Flavodoxin-like fold VagVIO5_42280 PF00999 Sodium/hydrogen exchanger family VagVIO5_42280 PF02254 TrkA-N domain VagVIO5_42310 PF00128 Alpha amylase, catalytic domain VagVIO5_42320 PF13411 MerR HTH family regulatory protein VagVIO5_42330 PF02627 Carboxymuconolactone decarboxylase family VagVIO5_42350 PF04151 Bacterial pre-peptidase C-terminal domain VagVIO5_42350 PF01752 Collagenase VagVIO5_42350 PF08453 Peptidase family M9 N-terminal VagVIO5_42370 PF17848 Acetyl-coA carboxylase zinc finger domain VagVIO5_42370 PF01039 Carboxyl transferase domain VagVIO5_42380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_42380 PF03466 LysR substrate binding domain VagVIO5_42390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_42390 PF00672 HAMP domain VagVIO5_42390 PF02743 Cache domain VagVIO5_42410 PF03824 High-affinity nickel-transport protein VagVIO5_42420 PF02583 Metal-sensitive transcriptional repressor VagVIO5_42460 PF00072 Response regulator receiver domain VagVIO5_42460 PF01584 CheW-like domain VagVIO5_42480 PF01243 Pyridoxamine 5'-phosphate oxidase VagVIO5_42490 PF06228 Haem utilisation ChuX/HutX VagVIO5_42500 PF04055 Radical SAM superfamily VagVIO5_42510 PF03544 Gram-negative bacterial TonB protein C-terminal VagVIO5_42520 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_42530 PF02472 Biopolymer transport protein ExbD/TolR VagVIO5_42550 PF01032 FecCD transport family VagVIO5_42560 PF00005 ABC transporter VagVIO5_42650 PF01467 Cytidylyltransferase-like VagVIO5_42660 PF02540 NAD synthase VagVIO5_42670 PF03473 MOSC domain VagVIO5_42670 PF03476 MOSC N-terminal beta barrel domain VagVIO5_42670 PF03476 MOSC N-terminal beta barrel domain VagVIO5_42670 PF03473 MOSC domain VagVIO5_42670 PF00111 2Fe-2S iron-sulfur cluster binding domain VagVIO5_42670 PF00111 2Fe-2S iron-sulfur cluster binding domain VagVIO5_42680 PF01679 Proteolipid membrane potential modulator VagVIO5_42690 PF01979 Amidohydrolase family VagVIO5_42700 PF05661 Protein of unknown function (DUF808) VagVIO5_42760 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_42770 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_42770 PF14785 Maltose transport system permease protein MalF P2 domain VagVIO5_42780 PF01547 Bacterial extracellular solute-binding protein VagVIO5_42790 PF00005 ABC transporter VagVIO5_42790 PF08402 TOBE domain VagVIO5_42800 PF02397 Bacterial sugar transferase VagVIO5_42830 PF13614 AAA domain VagVIO5_42830 PF13807 G-rich domain on putative tyrosine kinase VagVIO5_42830 PF02706 Chain length determinant protein VagVIO5_42850 PF00534 Glycosyl transferases group 1 VagVIO5_42850 PF13439 Glycosyltransferase Family 4 VagVIO5_42920 PF00440 Bacterial regulatory proteins, tetR family VagVIO5_42920 PF16925 Tetracyclin repressor-like, C-terminal domain VagVIO5_42930 PF00107 Zinc-binding dehydrogenase VagVIO5_42930 PF16884 N-terminal domain of oxidoreductase VagVIO5_42940 PF13417 Glutathione S-transferase, N-terminal domain VagVIO5_42950 PF06628 Catalase-related immune-responsive VagVIO5_42950 PF00199 Catalase VagVIO5_42960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VagVIO5_42960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VagVIO5_42980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VagVIO5_43000 PF12833 Helix-turn-helix domain VagVIO5_43010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VagVIO5_43010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VagVIO5_43020 PF01238 Phosphomannose isomerase type I VagVIO5_43040 PF13419 Haloacid dehalogenase-like hydrolase VagVIO5_43050 PF00127 Copper binding proteins, plastocyanin/azurin family VagVIO5_43060 PF02378 Phosphotransferase system, EIIC VagVIO5_43080 PF01266 FAD dependent oxidoreductase VagVIO5_43090 PF18113 Rubredoxin binding C-terminal domain VagVIO5_43090 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_43100 PF00171 Aldehyde dehydrogenase family VagVIO5_43110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VagVIO5_43110 PF00355 Rieske [2Fe-2S] domain VagVIO5_43120 PF02028 BCCT, betaine/carnitine/choline family transporter VagVIO5_43130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_43130 PF03466 LysR substrate binding domain VagVIO5_43140 PF02386 Cation transport protein VagVIO5_43150 PF02080 TrkA-C domain VagVIO5_43150 PF02254 TrkA-N domain VagVIO5_43160 PF00072 Response regulator receiver domain VagVIO5_43160 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_43170 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_43170 PF13493 Domain of unknown function (DUF4118) VagVIO5_43170 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_43170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_43170 PF13493 Domain of unknown function (DUF4118) VagVIO5_43170 PF02702 Osmosensitive K+ channel His kinase sensor domain VagVIO5_43170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_43170 PF02702 Osmosensitive K+ channel His kinase sensor domain VagVIO5_43180 PF00664 ABC transporter transmembrane region VagVIO5_43180 PF00005 ABC transporter VagVIO5_43190 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_43190 PF00593 TonB dependent receptor VagVIO5_43200 PF00005 ABC transporter VagVIO5_43210 PF01497 Periplasmic binding protein VagVIO5_43220 PF01032 FecCD transport family VagVIO5_43240 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_43250 PF00664 ABC transporter transmembrane region VagVIO5_43250 PF00005 ABC transporter VagVIO5_43270 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_43280 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_43300 PF00672 HAMP domain VagVIO5_43300 PF02743 Cache domain VagVIO5_43300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_43310 PF17863 AAA lid domain VagVIO5_43310 PF07726 ATPase family associated with various cellular activities (AAA) VagVIO5_43320 PF01882 Protein of unknown function DUF58 VagVIO5_43340 PF13519 von Willebrand factor type A domain VagVIO5_43350 PF13519 von Willebrand factor type A domain VagVIO5_43380 PF00005 ABC transporter VagVIO5_43390 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_43400 PF00528 Binding-protein-dependent transport system inner membrane component VagVIO5_43410 PF12849 PBP superfamily domain VagVIO5_43420 PF12729 Four helix bundle sensory module for signal transduction VagVIO5_43420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_43420 PF00672 HAMP domain VagVIO5_43460 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_43460 PF00593 TonB dependent receptor VagVIO5_43470 PF00326 Prolyl oligopeptidase family VagVIO5_43470 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VagVIO5_43480 PF00270 DEAD/DEAH box helicase VagVIO5_43480 PF00271 Helicase conserved C-terminal domain VagVIO5_43500 PF03734 L,D-transpeptidase catalytic domain VagVIO5_43500 PF01476 LysM domain VagVIO5_43500 PF17969 L,D-transpeptidase C-terminal domain VagVIO5_43510 PF03441 FAD binding domain of DNA photolyase VagVIO5_43510 PF00875 DNA photolyase VagVIO5_43520 PF13411 MerR HTH family regulatory protein VagVIO5_43530 PF08349 Protein of unknown function (DUF1722) VagVIO5_43540 PF01048 Phosphorylase superfamily VagVIO5_43570 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_43580 PF11742 Protein of unknown function (DUF3302) VagVIO5_43590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VagVIO5_43590 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_43600 PF07155 ECF-type riboflavin transporter, S component VagVIO5_43610 PF12558 ATP-binding cassette cobalt transporter VagVIO5_43610 PF00005 ABC transporter VagVIO5_43650 PF12801 4Fe-4S binding domain VagVIO5_43650 PF13237 4Fe-4S dicluster domain VagVIO5_43660 PF12800 4Fe-4S binding domain VagVIO5_43660 PF12838 4Fe-4S dicluster domain VagVIO5_43670 PF00583 Acetyltransferase (GNAT) family VagVIO5_43700 PF12945 Flagellar protein YcgR VagVIO5_43700 PF07238 PilZ domain VagVIO5_43710 PF13609 Gram-negative porin VagVIO5_43720 PF00672 HAMP domain VagVIO5_43720 PF17200 Single Cache domain 2 VagVIO5_43720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_43730 PF05362 Lon protease (S16) C-terminal proteolytic domain VagVIO5_43730 PF13654 AAA domain VagVIO5_43750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VagVIO5_43750 PF00005 ABC transporter VagVIO5_43760 PF00326 Prolyl oligopeptidase family VagVIO5_43760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VagVIO5_43770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_43770 PF03466 LysR substrate binding domain VagVIO5_43780 PF02652 L-lactate permease VagVIO5_43790 PF01070 FMN-dependent dehydrogenase VagVIO5_43810 PF00924 Mechanosensitive ion channel VagVIO5_43820 PF00194 Eukaryotic-type carbonic anhydrase VagVIO5_43830 PF00107 Zinc-binding dehydrogenase VagVIO5_43830 PF08240 Alcohol dehydrogenase GroES-like domain VagVIO5_43840 PF00155 Aminotransferase class I and II VagVIO5_43850 PF00990 Diguanylate cyclase, GGDEF domain VagVIO5_43850 PF00563 EAL domain VagVIO5_43850 PF13188 PAS domain VagVIO5_43850 PF03707 Bacterial signalling protein N terminal repeat VagVIO5_43860 PF00497 Bacterial extracellular solute-binding proteins, family 3 VagVIO5_43880 PF00080 Copper/zinc superoxide dismutase (SODC) VagVIO5_43890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_43890 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_43900 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_43900 PF00072 Response regulator receiver domain VagVIO5_43940 PF03466 LysR substrate binding domain VagVIO5_43940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_43950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VagVIO5_44010 PF03466 LysR substrate binding domain VagVIO5_44010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_44040 PF18269 T3SS EscN ATPase C-terminal domain VagVIO5_44040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VagVIO5_44060 PF01706 FliG C-terminal domain VagVIO5_44060 PF14842 FliG N-terminal domain VagVIO5_44060 PF14841 FliG middle domain VagVIO5_44070 PF01514 Secretory protein of YscJ/FliF family VagVIO5_44070 PF08345 Flagellar M-ring protein C-terminal VagVIO5_44080 PF02049 Flagellar hook-basal body complex protein FliE VagVIO5_44090 PF00158 Sigma-54 interaction domain VagVIO5_44090 PF00072 Response regulator receiver domain VagVIO5_44090 PF02954 Bacterial regulatory protein, Fis family VagVIO5_44130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VagVIO5_44140 PF00813 FliP family VagVIO5_44150 PF01313 Bacterial export proteins, family 3 VagVIO5_44160 PF01311 Bacterial export proteins, family 1 VagVIO5_44170 PF01312 FlhB HrpN YscU SpaS Family VagVIO5_44180 PF00771 FHIPEP family VagVIO5_44200 PF00700 Bacterial flagellin C-terminal helical region VagVIO5_44200 PF00669 Bacterial flagellin N-terminal helical region VagVIO5_44240 PF07196 Flagellin hook IN motif VagVIO5_44240 PF07195 Flagellar hook-associated protein 2 C-terminus VagVIO5_44240 PF02465 Flagellar hook-associated protein 2 N-terminus VagVIO5_44250 PF02561 Flagellar protein FliS VagVIO5_44280 PF03748 Flagellar basal body-associated protein FliL VagVIO5_44290 PF04545 Sigma-70, region 4 VagVIO5_44290 PF04542 Sigma-70 region 2 VagVIO5_44300 PF01618 MotA/TolQ/ExbB proton channel family VagVIO5_44310 PF00691 OmpA family VagVIO5_44310 PF13677 Membrane MotB of proton-channel complex MotA/MotB VagVIO5_44340 PF08000 Bacterial PH domain VagVIO5_44410 PF01228 Glycine radical VagVIO5_44410 PF02901 Pyruvate formate lyase-like VagVIO5_44420 PF04055 Radical SAM superfamily VagVIO5_44430 PF00923 Transaldolase/Fructose-6-phosphate aldolase VagVIO5_44450 PF00583 Acetyltransferase (GNAT) family VagVIO5_44470 PF07690 Major Facilitator Superfamily VagVIO5_44480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_44480 PF03466 LysR substrate binding domain VagVIO5_44490 PF00892 EamA-like transporter family VagVIO5_44530 PF13533 Biotin-lipoyl like VagVIO5_44550 PF01594 AI-2E family transporter VagVIO5_44560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VagVIO5_44570 PF00175 Oxidoreductase NAD-binding domain VagVIO5_44570 PF00970 Oxidoreductase FAD-binding domain VagVIO5_44590 PF09905 DNA-binding protein VF530 VagVIO5_44600 PF03466 LysR substrate binding domain VagVIO5_44600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_44620 PF00881 Nitroreductase family VagVIO5_44630 PF12833 Helix-turn-helix domain VagVIO5_44630 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VagVIO5_44640 PF00128 Alpha amylase, catalytic domain VagVIO5_44640 PF00686 Starch binding domain VagVIO5_44650 PF00768 D-alanyl-D-alanine carboxypeptidase VagVIO5_44650 PF07943 Penicillin-binding protein 5, C-terminal domain VagVIO5_44660 PF00561 alpha/beta hydrolase fold VagVIO5_44700 PF00875 DNA photolyase VagVIO5_44700 PF03441 FAD binding domain of DNA photolyase VagVIO5_44710 PF02469 Fasciclin domain VagVIO5_44720 PF18416 N-acetylglucosamine binding protein domain 2 VagVIO5_44720 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VagVIO5_44730 PF01734 Patatin-like phospholipase VagVIO5_44740 PF01914 MarC family integral membrane protein VagVIO5_44750 PF00881 Nitroreductase family VagVIO5_44770 PF02563 Polysaccharide biosynthesis/export protein VagVIO5_44770 PF10531 SLBB domain VagVIO5_44770 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VagVIO5_44780 PF01451 Low molecular weight phosphotyrosine protein phosphatase VagVIO5_44790 PF02706 Chain length determinant protein VagVIO5_44790 PF13614 AAA domain VagVIO5_44790 PF13807 G-rich domain on putative tyrosine kinase VagVIO5_44810 PF00375 Sodium:dicarboxylate symporter family VagVIO5_44820 PF06803 Protein of unknown function (DUF1232) VagVIO5_44830 PF01546 Peptidase family M20/M25/M40 VagVIO5_44830 PF07687 Peptidase dimerisation domain VagVIO5_44840 PF07670 Nucleoside recognition VagVIO5_44850 PF07670 Nucleoside recognition VagVIO5_44870 PF00128 Alpha amylase, catalytic domain VagVIO5_44880 PF00912 Transglycosylase VagVIO5_44890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VagVIO5_44890 PF02806 Alpha amylase, C-terminal all-beta domain VagVIO5_44890 PF00128 Alpha amylase, catalytic domain VagVIO5_44900 PF02446 4-alpha-glucanotransferase VagVIO5_44910 PF00343 Carbohydrate phosphorylase VagVIO5_44920 PF17874 MalT-like TPR region VagVIO5_44920 PF00196 Bacterial regulatory proteins, luxR family VagVIO5_44950 PF02630 SCO1/SenC VagVIO5_44960 PF00367 phosphotransferase system, EIIB VagVIO5_44960 PF02378 Phosphotransferase system, EIIC VagVIO5_44970 PF03193 RsgA GTPase VagVIO5_44980 PF00375 Sodium:dicarboxylate symporter family VagVIO5_44990 PF08543 Phosphomethylpyrimidine kinase VagVIO5_45010 PF13520 Amino acid permease VagVIO5_45020 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VagVIO5_45020 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VagVIO5_45020 PF01276 Orn/Lys/Arg decarboxylase, major domain VagVIO5_45050 PF18494 Pullulanase Ins domain VagVIO5_45050 PF17967 Pullulanase N2 domain VagVIO5_45050 PF03714 Bacterial pullanase-associated domain VagVIO5_45050 PF11852 Domain of unknown function (DUF3372) VagVIO5_45050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VagVIO5_45060 PF04231 Endonuclease I VagVIO5_45070 PF02903 Alpha amylase, N-terminal ig-like domain VagVIO5_45070 PF00128 Alpha amylase, catalytic domain VagVIO5_45070 PF16657 Maltogenic Amylase, C-terminal domain VagVIO5_45100 PF02264 LamB porin VagVIO5_45110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VagVIO5_45110 PF00128 Alpha amylase, catalytic domain VagVIO5_45130 PF07690 Major Facilitator Superfamily VagVIO5_45180 PF04225 Opacity-associated protein A LysM-like domain VagVIO5_45180 PF01551 Peptidase family M23 VagVIO5_45190 PF05193 Peptidase M16 inactive domain VagVIO5_45190 PF00675 Insulinase (Peptidase family M16) VagVIO5_45200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VagVIO5_45200 PF17200 Single Cache domain 2 VagVIO5_45200 PF00672 HAMP domain VagVIO5_45210 PF00005 ABC transporter VagVIO5_45220 PF01032 FecCD transport family VagVIO5_45230 PF01032 FecCD transport family VagVIO5_45240 PF01497 Periplasmic binding protein VagVIO5_45250 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_45250 PF00593 TonB dependent receptor VagVIO5_45250 PF07660 Secretin and TonB N terminus short domain VagVIO5_45260 PF07715 TonB-dependent Receptor Plug Domain VagVIO5_45260 PF00593 TonB dependent receptor VagVIO5_45270 PF00206 Lyase VagVIO5_45270 PF02655 ATP-grasp domain VagVIO5_45280 PF04183 IucA / IucC family VagVIO5_45280 PF06276 Ferric iron reductase FhuF-like transporter VagVIO5_45300 PF06276 Ferric iron reductase FhuF-like transporter VagVIO5_45300 PF04183 IucA / IucC family VagVIO5_45310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VagVIO5_45310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VagVIO5_45320 PF01547 Bacterial extracellular solute-binding protein VagVIO5_45330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_45330 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_45330 PF08521 Two-component sensor kinase N-terminal VagVIO5_45340 PF00486 Transcriptional regulatory protein, C terminal VagVIO5_45340 PF00072 Response regulator receiver domain VagVIO5_45350 PF00367 phosphotransferase system, EIIB VagVIO5_45350 PF02378 Phosphotransferase system, EIIC VagVIO5_45390 PF08241 Methyltransferase domain VagVIO5_45410 PF00535 Glycosyl transferase family 2 VagVIO5_45440 PF00005 ABC transporter VagVIO5_45480 PF02566 OsmC-like protein VagVIO5_45490 PF01047 MarR family VagVIO5_45500 PF10417 C-terminal domain of 1-Cys peroxiredoxin VagVIO5_45500 PF00578 AhpC/TSA family VagVIO5_45510 PF13192 Thioredoxin domain VagVIO5_45510 PF07992 Pyridine nucleotide-disulphide oxidoreductase VagVIO5_45540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VagVIO5_45540 PF03466 LysR substrate binding domain VagVIO5_45550 PF12833 Helix-turn-helix domain VagVIO5_45550 PF01965 DJ-1/PfpI family VagVIO5_45560 PF04542 Sigma-70 region 2 VagVIO5_45560 PF08281 Sigma-70, region 4 VagVIO5_45600 PF03473 MOSC domain VagVIO5_45600 PF03475 3-alpha domain VagVIO5_45650 PF12833 Helix-turn-helix domain VagVIO5_45650 PF06719 AraC-type transcriptional regulator N-terminus VagVIO5_45670 PF00005 ABC transporter VagVIO5_45670 PF00664 ABC transporter transmembrane region VagVIO5_45690 PF01037 Lrp/AsnC ligand binding domain VagVIO5_45720 PF13302 Acetyltransferase (GNAT) domain VagVIO5_45750 PF00474 Sodium:solute symporter family VagVIO5_45760 PF00474 Sodium:solute symporter family VagVIO5_45780 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VagVIO5_45780 PF01619 Proline dehydrogenase VagVIO5_45780 PF00171 Aldehyde dehydrogenase family VagVIO5_45780 PF14850 DNA-binding domain of Proline dehydrogenase VagVIO5_45790 PF12833 Helix-turn-helix domain VagVIO5_45810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VagVIO5_45810 PF01243 Pyridoxamine 5'-phosphate oxidase VagVIO5_45820 PF00512 His Kinase A (phospho-acceptor) domain VagVIO5_45820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VagVIO5_45820 PF02743 Cache domain VagVIO5_45830 PF00072 Response regulator receiver domain VagVIO5_45830 PF02954 Bacterial regulatory protein, Fis family VagVIO5_45830 PF00158 Sigma-54 interaction domain VagVIO5_45840 PF00529 HlyD membrane-fusion protein of T1SS VagVIO5_45870 PF00664 ABC transporter transmembrane region VagVIO5_45870 PF00005 ABC transporter VagVIO5_45870 PF03412 Peptidase C39 family VagVIO5_45900 PF03358 NADPH-dependent FMN reductase VagVIO5_45910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VagVIO5_45920 PF00246 Zinc carboxypeptidase VagVIO5_45930 PF01380 SIS domain VagVIO5_45930 PF01418 Helix-turn-helix domain, rpiR family VagVIO5_45940 PF01380 SIS domain VagVIO5_45950 PF00367 phosphotransferase system, EIIB VagVIO5_45950 PF02378 Phosphotransferase system, EIIC VagVIO5_45960 PF00267 Gram-negative porin VagVIO5_45980 PF00132 Bacterial transferase hexapeptide (six repeats) VagVIO5_46000 PF13718 GNAT acetyltransferase 2 VagVIO5_46000 PF05127 Helicase VagVIO5_46010 PF02195 ParB-like nuclease domain VagVIO5_46010 PF08775 ParB family VagVIO5_46020 PF13614 AAA domain VagVIO5_46020 PF18607 ParA helix turn helix domain