locus-tag class description YZOS03_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain YZOS03_00010 PF02767 DNA polymerase III beta subunit, central domain YZOS03_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain YZOS03_00020 PF02463 RecF/RecN/SMC N terminal domain YZOS03_00030 PF00204 DNA gyrase B YZOS03_00030 PF00986 DNA gyrase B subunit, carboxyl terminus YZOS03_00030 PF18053 DNA gyrase B subunit insert domain YZOS03_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_00030 PF01751 Toprim domain YZOS03_00060 PF00011 Hsp20/alpha crystallin family YZOS03_00070 PF00155 Aminotransferase class I and II YZOS03_00080 PF00128 Alpha amylase, catalytic domain YZOS03_00090 PF05746 DALR anticodon binding domain YZOS03_00090 PF02092 Glycyl-tRNA synthetase beta subunit YZOS03_00100 PF02091 Glycyl-tRNA synthetase alpha subunit YZOS03_00110 PF01169 Uncharacterized protein family UPF0016 YZOS03_00130 PF01206 Sulfurtransferase TusA YZOS03_00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_00150 PF03466 LysR substrate binding domain YZOS03_00160 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_00160 PF00107 Zinc-binding dehydrogenase YZOS03_00170 PF02803 Thiolase, C-terminal domain YZOS03_00170 PF00108 Thiolase, N-terminal domain YZOS03_00180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YZOS03_00180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YZOS03_00180 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_00190 PF09186 Domain of unknown function (DUF1949) YZOS03_00190 PF01205 Uncharacterized protein family UPF0029 YZOS03_00200 PF02386 Cation transport protein YZOS03_00210 PF12724 Flavodoxin domain YZOS03_00220 PF07731 Multicopper oxidase YZOS03_00220 PF00394 Multicopper oxidase YZOS03_00220 PF07732 Multicopper oxidase YZOS03_00230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YZOS03_00240 PF13667 ThiC-associated domain YZOS03_00240 PF01964 Radical SAM ThiC family YZOS03_00250 PF02581 Thiamine monophosphate synthase YZOS03_00260 PF00899 ThiF family YZOS03_00270 PF02597 ThiS family YZOS03_00280 PF05690 Thiazole biosynthesis protein ThiG YZOS03_00290 PF06968 Biotin and Thiamin Synthesis associated domain YZOS03_00290 PF04055 Radical SAM superfamily YZOS03_00300 PF00557 Metallopeptidase family M24 YZOS03_00300 PF01321 Creatinase/Prolidase N-terminal domain YZOS03_00300 PF01321 Creatinase/Prolidase N-terminal domain YZOS03_00300 PF00557 Metallopeptidase family M24 YZOS03_00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_00310 PF03466 LysR substrate binding domain YZOS03_00320 PF07690 Major Facilitator Superfamily YZOS03_00360 PF05114 Protein of unknown function (DUF692) YZOS03_00380 PF00580 UvrD/REP helicase N-terminal domain YZOS03_00380 PF13361 UvrD-like helicase C-terminal domain YZOS03_00400 PF01810 LysE type translocator YZOS03_00420 PF00892 EamA-like transporter family YZOS03_00430 PF00270 DEAD/DEAH box helicase YZOS03_00430 PF00271 Helicase conserved C-terminal domain YZOS03_00430 PF00570 HRDC domain YZOS03_00430 PF16124 RecQ zinc-binding YZOS03_00430 PF09382 RQC domain YZOS03_00450 PF02592 Putative vitamin uptake transporter YZOS03_00470 PF02541 Ppx/GppA phosphatase family YZOS03_00480 PF00270 DEAD/DEAH box helicase YZOS03_00480 PF00271 Helicase conserved C-terminal domain YZOS03_00490 PF00085 Thioredoxin YZOS03_00500 PF07498 Rho termination factor, N-terminal domain YZOS03_00500 PF07497 Rho termination factor, RNA-binding domain YZOS03_00500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_00520 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YZOS03_00530 PF00111 2Fe-2S iron-sulfur cluster binding domain YZOS03_00540 PF00175 Oxidoreductase NAD-binding domain YZOS03_00560 PF07219 HemY protein N-terminus YZOS03_00570 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase YZOS03_00590 PF02602 Uroporphyrinogen-III synthase HemD YZOS03_00600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YZOS03_00600 PF03900 Porphobilinogen deaminase, C-terminal domain YZOS03_00610 PF12633 Adenylate cyclase NT domain YZOS03_00610 PF01295 Adenylate cyclase, class-I YZOS03_00620 PF12633 Adenylate cyclase NT domain YZOS03_00620 PF01295 Adenylate cyclase, class-I YZOS03_00630 PF01491 Frataxin-like domain YZOS03_00640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YZOS03_00640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YZOS03_00650 PF01678 Diaminopimelate epimerase YZOS03_00670 PF00589 Phage integrase family YZOS03_00670 PF02899 Phage integrase, N-terminal SAM-like domain YZOS03_00680 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_00690 PF08495 FIST N domain YZOS03_00690 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_00690 PF10442 FIST C domain YZOS03_00690 PF00563 EAL domain YZOS03_00700 PF03942 DTW domain YZOS03_00740 PF12146 Serine aminopeptidase, S33 YZOS03_00750 PF01810 LysE type translocator YZOS03_00760 PF00563 EAL domain YZOS03_00760 PF08668 HDOD domain YZOS03_00770 PF00563 EAL domain YZOS03_00770 PF08668 HDOD domain YZOS03_00780 PF01022 Bacterial regulatory protein, arsR family YZOS03_00790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YZOS03_00790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YZOS03_00830 PF10694 Protein of unknown function (DUF2500) YZOS03_00870 PF01914 MarC family integral membrane protein YZOS03_00900 PF02881 SRP54-type protein, helical bundle domain YZOS03_00900 PF00448 SRP54-type protein, GTPase domain YZOS03_00900 PF02881 SRP54-type protein, helical bundle domain YZOS03_00900 PF00448 SRP54-type protein, GTPase domain YZOS03_00910 PF00005 ABC transporter YZOS03_00920 PF18075 FtsX extracellular domain YZOS03_00930 PF04545 Sigma-70, region 4 YZOS03_00930 PF04542 Sigma-70 region 2 YZOS03_00930 PF00140 Sigma-70 factor, region 1.2 YZOS03_00940 PF00581 Rhodanese-like domain YZOS03_00950 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease YZOS03_00950 PF01694 Rhomboid family YZOS03_00960 PF03748 Flagellar basal body-associated protein FliL YZOS03_00970 PF04345 Chorismate lyase YZOS03_00980 PF01040 UbiA prenyltransferase family YZOS03_00990 PF01553 Acyltransferase YZOS03_01000 PF00717 Peptidase S24-like YZOS03_01000 PF01726 LexA DNA binding domain YZOS03_01020 PF04072 Leucine carboxyl methyltransferase YZOS03_01030 PF01554 MatE YZOS03_01040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YZOS03_01040 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_01050 PF00440 Bacterial regulatory proteins, tetR family YZOS03_01070 PF05958 tRNA (Uracil-5-)-methyltransferase YZOS03_01080 PF00593 TonB dependent receptor YZOS03_01080 PF07715 TonB-dependent Receptor Plug Domain YZOS03_01100 PF01177 Asp/Glu/Hydantoin racemase YZOS03_01120 PF13091 PLD-like domain YZOS03_01140 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YZOS03_01140 PF01565 FAD binding domain YZOS03_01150 PF03099 Biotin/lipoate A/B protein ligase family YZOS03_01150 PF02237 Biotin protein ligase C terminal domain YZOS03_01150 PF08279 HTH domain YZOS03_01160 PF00485 Phosphoribulokinase / Uridine kinase family YZOS03_01170 PF00009 Elongation factor Tu GTP binding domain YZOS03_01170 PF03144 Elongation factor Tu domain 2 YZOS03_01170 PF03143 Elongation factor Tu C-terminal domain YZOS03_01180 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YZOS03_01190 PF00467 KOW motif YZOS03_01190 PF02357 Transcription termination factor nusG YZOS03_01200 PF03946 Ribosomal protein L11, N-terminal domain YZOS03_01200 PF00298 Ribosomal protein L11, RNA binding domain YZOS03_01210 PF00687 Ribosomal protein L1p/L10e family YZOS03_01220 PF00466 Ribosomal protein L10 YZOS03_01230 PF16320 Ribosomal protein L7/L12 dimerisation domain YZOS03_01230 PF00542 Ribosomal protein L7/L12 C-terminal domain YZOS03_01240 PF10385 RNA polymerase beta subunit external 1 domain YZOS03_01240 PF04560 RNA polymerase Rpb2, domain 7 YZOS03_01240 PF00562 RNA polymerase Rpb2, domain 6 YZOS03_01240 PF04565 RNA polymerase Rpb2, domain 3 YZOS03_01240 PF04561 RNA polymerase Rpb2, domain 2 YZOS03_01240 PF04563 RNA polymerase beta subunit YZOS03_01250 PF05000 RNA polymerase Rpb1, domain 4 YZOS03_01250 PF04983 RNA polymerase Rpb1, domain 3 YZOS03_01250 PF00623 RNA polymerase Rpb1, domain 2 YZOS03_01250 PF04997 RNA polymerase Rpb1, domain 1 YZOS03_01250 PF04998 RNA polymerase Rpb1, domain 5 YZOS03_01260 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YZOS03_01270 PF09297 NADH pyrophosphatase zinc ribbon domain YZOS03_01270 PF00293 NUDIX domain YZOS03_01280 PF01208 Uroporphyrinogen decarboxylase (URO-D) YZOS03_01290 PF03167 Uracil DNA glycosylase superfamily YZOS03_01300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YZOS03_01310 PF04222 Protein of unknown function (DUF416) YZOS03_01320 PF01595 Cyclin M transmembrane N-terminal domain YZOS03_01320 PF00571 CBS domain YZOS03_01330 PF00216 Bacterial DNA-binding protein YZOS03_01350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YZOS03_01350 PF02844 Phosphoribosylglycinamide synthetase, N domain YZOS03_01350 PF02843 Phosphoribosylglycinamide synthetase, C domain YZOS03_01370 PF02142 MGS-like domain YZOS03_01370 PF01808 AICARFT/IMPCHase bienzyme YZOS03_01380 PF13411 MerR HTH family regulatory protein YZOS03_01390 PF00486 Transcriptional regulatory protein, C terminal YZOS03_01390 PF18500 CadC C-terminal domain 1 YZOS03_01410 PF13520 Amino acid permease YZOS03_01420 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YZOS03_01420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YZOS03_01420 PF01276 Orn/Lys/Arg decarboxylase, major domain YZOS03_01430 PF12848 ABC transporter YZOS03_01430 PF00005 ABC transporter YZOS03_01440 PF07690 Major Facilitator Superfamily YZOS03_01450 PF02954 Bacterial regulatory protein, Fis family YZOS03_01460 PF01207 Dihydrouridine synthase (Dus) YZOS03_01480 PF02785 Biotin carboxylase C-terminal domain YZOS03_01480 PF00289 Biotin carboxylase, N-terminal domain YZOS03_01480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YZOS03_01490 PF00364 Biotin-requiring enzyme YZOS03_01500 PF01220 Dehydroquinase class II YZOS03_01510 PF13193 AMP-binding enzyme C-terminal domain YZOS03_01510 PF00501 AMP-binding enzyme YZOS03_01510 PF16177 Acetyl-coenzyme A synthetase N-terminus YZOS03_01540 PF12832 MFS_1 like family YZOS03_01550 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_01550 PF00072 Response regulator receiver domain YZOS03_01550 PF09308 LuxQ, periplasmic YZOS03_01560 PF10415 Fumarase C C-terminus YZOS03_01560 PF00206 Lyase YZOS03_01590 PF00474 Sodium:solute symporter family YZOS03_01610 PF03471 Transporter associated domain YZOS03_01610 PF00999 Sodium/hydrogen exchanger family YZOS03_01610 PF02080 TrkA-C domain YZOS03_01620 PF00072 Response regulator receiver domain YZOS03_01620 PF00196 Bacterial regulatory proteins, luxR family YZOS03_01630 PF02683 Cytochrome C biogenesis protein transmembrane region YZOS03_01630 PF11412 Disulphide bond corrector protein DsbC YZOS03_01640 PF03605 Anaerobic c4-dicarboxylate membrane transporter YZOS03_01650 PF10415 Fumarase C C-terminus YZOS03_01650 PF00206 Lyase YZOS03_01660 PF04186 FxsA cytoplasmic membrane protein YZOS03_01670 PF00588 SpoU rRNA Methylase family YZOS03_01680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YZOS03_01680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YZOS03_01690 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_01690 PF00672 HAMP domain YZOS03_01690 PF16527 Two-component sensor protein CpxA, periplasmic domain YZOS03_01700 PF00072 Response regulator receiver domain YZOS03_01700 PF00486 Transcriptional regulatory protein, C terminal YZOS03_01710 PF07813 LTXXQ motif family protein YZOS03_01720 PF01545 Cation efflux family YZOS03_01720 PF16916 Dimerisation domain of Zinc Transporter YZOS03_01730 PF00365 Phosphofructokinase YZOS03_01740 PF01554 MatE YZOS03_01750 PF00166 Chaperonin 10 Kd subunit YZOS03_01760 PF00118 TCP-1/cpn60 chaperonin family YZOS03_01780 PF02308 MgtC family YZOS03_01790 PF04055 Radical SAM superfamily YZOS03_01800 PF08207 Elongation factor P (EF-P) KOW-like domain YZOS03_01800 PF01132 Elongation factor P (EF-P) OB domain YZOS03_01800 PF09285 Elongation factor P, C-terminal YZOS03_01820 PF02313 Fumarate reductase subunit D YZOS03_01830 PF02300 Fumarate reductase subunit C YZOS03_01840 PF13183 4Fe-4S dicluster domain YZOS03_01840 PF13085 2Fe-2S iron-sulfur cluster binding domain YZOS03_01850 PF02910 Fumarate reductase flavoprotein C-term YZOS03_01850 PF00890 FAD binding domain YZOS03_01860 PF00152 tRNA synthetases class II (D, K and N) YZOS03_01880 PF00440 Bacterial regulatory proteins, tetR family YZOS03_01880 PF08360 QacR-like protein, C-terminal region YZOS03_01900 PF01551 Peptidase family M23 YZOS03_01910 PF06426 Serine acetyltransferase, N-terminal YZOS03_01910 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_01920 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YZOS03_01920 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YZOS03_01930 PF02556 Preprotein translocase subunit SecB YZOS03_01940 PF00581 Rhodanese-like domain YZOS03_01950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YZOS03_01950 PF01676 Metalloenzyme superfamily YZOS03_01970 PF00939 Sodium:sulfate symporter transmembrane region YZOS03_01980 PF02666 Phosphatidylserine decarboxylase YZOS03_01990 PF03193 RsgA GTPase YZOS03_02000 PF00929 Exonuclease YZOS03_02010 PF08331 Domain of unknown function (DUF1730) YZOS03_02020 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YZOS03_02030 PF01520 N-acetylmuramoyl-L-alanine amidase YZOS03_02040 PF01119 DNA mismatch repair protein, C-terminal domain YZOS03_02040 PF08676 MutL C terminal dimerisation domain YZOS03_02060 PF17209 Hfq protein YZOS03_02070 PF16360 GTP-binding GTPase Middle Region YZOS03_02070 PF01926 50S ribosome-binding GTPase YZOS03_02070 PF13167 GTP-binding GTPase N-terminal YZOS03_02080 PF12221 Bacterial membrane protein N terminal YZOS03_02080 PF01145 SPFH domain / Band 7 family YZOS03_02090 PF01145 SPFH domain / Band 7 family YZOS03_02100 PF00709 Adenylosuccinate synthetase YZOS03_02110 PF08238 Sel1 repeat YZOS03_02120 PF00970 Oxidoreductase FAD-binding domain YZOS03_02120 PF00042 Globin YZOS03_02120 PF00175 Oxidoreductase NAD-binding domain YZOS03_02130 PF02082 Transcriptional regulator YZOS03_02140 PF17876 Cold shock domain YZOS03_02140 PF08461 Ribonuclease R winged-helix domain YZOS03_02140 PF08206 Ribonuclease B OB domain YZOS03_02140 PF00773 RNB domain YZOS03_02140 PF00575 S1 RNA binding domain YZOS03_02150 PF00588 SpoU rRNA Methylase family YZOS03_02150 PF08032 RNA 2'-O ribose methyltransferase substrate binding YZOS03_02160 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_02170 PF00579 tRNA synthetases class I (W and Y) YZOS03_02200 PF00117 Glutamine amidotransferase class-I YZOS03_02210 PF00202 Aminotransferase class-III YZOS03_02220 PF04958 Arginine N-succinyltransferase beta subunit YZOS03_02230 PF00171 Aldehyde dehydrogenase family YZOS03_02250 PF00027 Cyclic nucleotide-binding domain YZOS03_02250 PF13545 Crp-like helix-turn-helix domain YZOS03_02260 PF00485 Phosphoribulokinase / Uridine kinase family YZOS03_02270 PF06794 Uncharacterised protein family (UPF0270) YZOS03_02280 PF00561 alpha/beta hydrolase fold YZOS03_02300 PF00005 ABC transporter YZOS03_02300 PF12848 ABC transporter YZOS03_02310 PF02525 Flavodoxin-like fold YZOS03_02320 PF00999 Sodium/hydrogen exchanger family YZOS03_02320 PF02254 TrkA-N domain YZOS03_02340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YZOS03_02350 PF01112 Asparaginase YZOS03_02360 PF04102 SlyX YZOS03_02380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YZOS03_02380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YZOS03_02390 PF08348 YheO-like PAS domain YZOS03_02390 PF13309 HTH domain YZOS03_02400 PF02635 DsrE/DsrF-like family YZOS03_02410 PF02635 DsrE/DsrF-like family YZOS03_02420 PF04077 DsrH like protein YZOS03_02430 PF00164 Ribosomal protein S12/S23 YZOS03_02440 PF00177 Ribosomal protein S7p/S5e YZOS03_02450 PF00679 Elongation factor G C-terminus YZOS03_02450 PF14492 Elongation Factor G, domain II YZOS03_02450 PF03764 Elongation factor G, domain IV YZOS03_02450 PF00009 Elongation factor Tu GTP binding domain YZOS03_02450 PF03144 Elongation factor Tu domain 2 YZOS03_02460 PF03143 Elongation factor Tu C-terminal domain YZOS03_02460 PF03144 Elongation factor Tu domain 2 YZOS03_02460 PF00009 Elongation factor Tu GTP binding domain YZOS03_02470 PF00210 Ferritin-like domain YZOS03_02480 PF00390 Malic enzyme, N-terminal domain YZOS03_02480 PF03949 Malic enzyme, NAD binding domain YZOS03_02490 PF01340 Met Apo-repressor, MetJ YZOS03_02500 PF01053 Cys/Met metabolism PLP-dependent enzyme YZOS03_02510 PF00696 Amino acid kinase family YZOS03_02510 PF00742 Homoserine dehydrogenase YZOS03_02510 PF03447 Homoserine dehydrogenase, NAD binding domain YZOS03_02520 PF02219 Methylenetetrahydrofolate reductase YZOS03_02540 PF00311 Phosphoenolpyruvate carboxylase YZOS03_02550 PF01546 Peptidase family M20/M25/M40 YZOS03_02550 PF07687 Peptidase dimerisation domain YZOS03_02560 PF01118 Semialdehyde dehydrogenase, NAD binding domain YZOS03_02560 PF02774 Semialdehyde dehydrogenase, dimerisation domain YZOS03_02570 PF00696 Amino acid kinase family YZOS03_02580 PF00764 Arginosuccinate synthase YZOS03_02590 PF00583 Acetyltransferase (GNAT) family YZOS03_02590 PF14698 Argininosuccinate lyase C-terminal YZOS03_02590 PF00206 Lyase YZOS03_02600 PF00403 Heavy-metal-associated domain YZOS03_02600 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_02600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YZOS03_02610 PF00462 Glutaredoxin YZOS03_02610 PF08534 Redoxin YZOS03_02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_02620 PF03466 LysR substrate binding domain YZOS03_02630 PF00912 Transglycosylase YZOS03_02630 PF17092 Penicillin-binding protein OB-like domain YZOS03_02630 PF00905 Penicillin binding protein transpeptidase domain YZOS03_02670 PF04351 Pilus assembly protein, PilP YZOS03_02680 PF11741 AMIN domain YZOS03_02680 PF00263 Bacterial type II and III secretion system protein YZOS03_02680 PF03958 Bacterial type II/III secretion system short domain YZOS03_02680 PF07660 Secretin and TonB N terminus short domain YZOS03_02690 PF01202 Shikimate kinase YZOS03_02700 PF01761 3-dehydroquinate synthase YZOS03_02720 PF02086 D12 class N6 adenine-specific DNA methyltransferase YZOS03_02730 PF00834 Ribulose-phosphate 3 epimerase family YZOS03_02740 PF01250 Ribosomal protein S6 YZOS03_02750 PF00436 Single-strand binding protein family YZOS03_02760 PF01084 Ribosomal protein S18 YZOS03_02770 PF01281 Ribosomal protein L9, N-terminal domain YZOS03_02770 PF03948 Ribosomal protein L9, C-terminal domain YZOS03_02790 PF03796 DnaB-like helicase C terminal domain YZOS03_02790 PF00772 DnaB-like helicase N terminal domain YZOS03_02800 PF01168 Alanine racemase, N-terminal domain YZOS03_02800 PF00842 Alanine racemase, C-terminal domain YZOS03_02810 PF01894 Uncharacterised protein family UPF0047 YZOS03_02820 PF00342 Phosphoglucose isomerase YZOS03_02840 PF01475 Ferric uptake regulator family YZOS03_02850 PF01207 Dihydrouridine synthase (Dus) YZOS03_02890 PF00175 Oxidoreductase NAD-binding domain YZOS03_02890 PF00667 FAD binding domain YZOS03_02890 PF00258 Flavodoxin YZOS03_02900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YZOS03_02900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YZOS03_02910 PF01507 Phosphoadenosine phosphosulfate reductase family YZOS03_02930 PF00999 Sodium/hydrogen exchanger family YZOS03_02940 PF02310 B12 binding domain YZOS03_02940 PF02607 B12 binding domain YZOS03_02940 PF02965 Vitamin B12 dependent methionine synthase, activation domain YZOS03_02940 PF00809 Pterin binding enzyme YZOS03_02940 PF02574 Homocysteine S-methyltransferase YZOS03_02950 PF00696 Amino acid kinase family YZOS03_02950 PF01842 ACT domain YZOS03_02960 PF00266 Aminotransferase class-V YZOS03_02980 PF00005 ABC transporter YZOS03_02980 PF17760 UvrA interaction domain YZOS03_02980 PF17755 UvrA DNA-binding domain YZOS03_02990 PF00483 Nucleotidyl transferase YZOS03_03000 PF00196 Bacterial regulatory proteins, luxR family YZOS03_03010 PF00436 Single-strand binding protein family YZOS03_03020 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_03020 PF00563 EAL domain YZOS03_03020 PF17157 Gammaproteobacterial periplasmic sensor domain YZOS03_03060 PF03958 Bacterial type II/III secretion system short domain YZOS03_03060 PF00263 Bacterial type II and III secretion system protein YZOS03_03070 PF13401 AAA domain YZOS03_03070 PF01471 Putative peptidoglycan binding domain YZOS03_03090 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YZOS03_03090 PF00437 Type II/IV secretion system protein YZOS03_03100 PF00482 Type II secretion system (T2SS), protein F YZOS03_03120 PF07963 Prokaryotic N-terminal methylation motif YZOS03_03210 PF04085 rod shape-determining protein MreC YZOS03_03220 PF04093 rod shape-determining protein MreD YZOS03_03230 PF02545 Maf-like protein YZOS03_03240 PF10150 Ribonuclease E/G family YZOS03_03240 PF00575 S1 RNA binding domain YZOS03_03250 PF13502 AsmA-like C-terminal region YZOS03_03250 PF13116 Protein of unknown function YZOS03_03260 PF00795 Carbon-nitrogen hydrolase YZOS03_03270 PF01523 Putative modulator of DNA gyrase YZOS03_03280 PF01523 Putative modulator of DNA gyrase YZOS03_03290 PF02562 PhoH-like protein YZOS03_03290 PF13638 PIN domain YZOS03_03300 PF00271 Helicase conserved C-terminal domain YZOS03_03300 PF12137 RNA polymerase recycling family C-terminal YZOS03_03300 PF00176 SNF2 family N-terminal domain YZOS03_03300 PF18339 RapA N-terminal Tudor like domain 1 YZOS03_03300 PF18337 RapA N-terminal Tudor like domain YZOS03_03320 PF00849 RNA pseudouridylate synthase YZOS03_03330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YZOS03_03330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YZOS03_03340 PF04751 Protein of unknown function (DUF615) YZOS03_03350 PF01523 Putative modulator of DNA gyrase YZOS03_03360 PF00571 CBS domain YZOS03_03360 PF01769 Divalent cation transporter YZOS03_03360 PF03448 MgtE intracellular N domain YZOS03_03370 PF00381 PTS HPr component phosphorylation site YZOS03_03380 PF03668 P-loop ATPase protein family YZOS03_03390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YZOS03_03400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YZOS03_03410 PF00309 Sigma-54 factor, Activator interacting domain (AID) YZOS03_03410 PF04963 Sigma-54 factor, core binding domain YZOS03_03410 PF04552 Sigma-54, DNA binding domain YZOS03_03420 PF00005 ABC transporter YZOS03_03420 PF12399 Branched-chain amino acid ATP-binding cassette transporter YZOS03_03430 PF03968 OstA-like protein YZOS03_03450 PF00571 CBS domain YZOS03_03450 PF01380 SIS domain YZOS03_03460 PF01699 Sodium/calcium exchanger protein YZOS03_03470 PF00005 ABC transporter YZOS03_03480 PF02405 Permease MlaE YZOS03_03490 PF02470 MlaD protein YZOS03_03500 PF05494 MlaC protein YZOS03_03520 PF01722 BolA-like protein YZOS03_03530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YZOS03_03540 PF01553 Acyltransferase YZOS03_03550 PF01042 Endoribonuclease L-PSP YZOS03_03560 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain YZOS03_03560 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain YZOS03_03570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YZOS03_03570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YZOS03_03580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YZOS03_03580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YZOS03_03600 PF06877 Regulator of ribonuclease activity B YZOS03_03620 PF00583 Acetyltransferase (GNAT) family YZOS03_03640 PF08264 Anticodon-binding domain of tRNA YZOS03_03640 PF00133 tRNA synthetases class I (I, L, M and V) YZOS03_03640 PF10458 Valyl tRNA synthetase tRNA binding arm YZOS03_03650 PF04364 DNA polymerase III chi subunit, HolC YZOS03_03660 PF00883 Cytosol aminopeptidase family, catalytic domain YZOS03_03660 PF02789 Cytosol aminopeptidase family, N-terminal domain YZOS03_03670 PF03739 Lipopolysaccharide export system permease LptF/LptG YZOS03_03680 PF03739 Lipopolysaccharide export system permease LptF/LptG YZOS03_03700 PF10011 Predicted membrane protein (DUF2254) YZOS03_03730 PF01522 Polysaccharide deacetylase YZOS03_03740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YZOS03_03750 PF02378 Phosphotransferase system, EIIC YZOS03_03760 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YZOS03_03770 PF02056 Family 4 glycosyl hydrolase YZOS03_03770 PF11975 Family 4 glycosyl hydrolase C-terminal domain YZOS03_03780 PF04794 YdjC-like protein YZOS03_03790 PF00356 Bacterial regulatory proteins, lacI family YZOS03_03810 PF00171 Aldehyde dehydrogenase family YZOS03_03820 PF00672 HAMP domain YZOS03_03820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_03820 PF17200 Single Cache domain 2 YZOS03_03830 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain YZOS03_03830 PF01464 Transglycosylase SLT domain YZOS03_03840 PF04362 Bacterial Fe(2+) trafficking YZOS03_03850 PF00730 HhH-GPD superfamily base excision DNA repair protein YZOS03_03850 PF00633 Helix-hairpin-helix motif YZOS03_03850 PF14815 NUDIX domain YZOS03_03860 PF02390 Putative methyltransferase YZOS03_03870 PF02086 D12 class N6 adenine-specific DNA methyltransferase YZOS03_03880 PF04960 Glutaminase YZOS03_03890 PF06969 HemN C-terminal domain YZOS03_03890 PF04055 Radical SAM superfamily YZOS03_03900 PF01725 Ham1 family YZOS03_03920 PF02594 Uncharacterised ACR, YggU family COG1872 YZOS03_03930 PF02325 YGGT family YZOS03_03940 PF03807 NADP oxidoreductase coenzyme F420-dependent YZOS03_03940 PF14748 Pyrroline-5-carboxylate reductase dimerisation YZOS03_03950 PF01168 Alanine racemase, N-terminal domain YZOS03_03960 PF00437 Type II/IV secretion system protein YZOS03_03970 PF00437 Type II/IV secretion system protein YZOS03_03980 PF03652 Holliday junction resolvase YZOS03_03990 PF02622 Uncharacterized ACR, COG1678 YZOS03_04000 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YZOS03_04000 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YZOS03_04010 PF04452 RNA methyltransferase YZOS03_04020 PF04231 Endonuclease I YZOS03_04040 PF10263 SprT-like family YZOS03_04040 PF17283 SprT-like zinc ribbon domain YZOS03_04060 PF02773 S-adenosylmethionine synthetase, C-terminal domain YZOS03_04060 PF00438 S-adenosylmethionine synthetase, N-terminal domain YZOS03_04060 PF02772 S-adenosylmethionine synthetase, central domain YZOS03_04070 PF02779 Transketolase, pyrimidine binding domain YZOS03_04070 PF02780 Transketolase, C-terminal domain YZOS03_04070 PF00456 Transketolase, thiamine diphosphate binding domain YZOS03_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_04080 PF03466 LysR substrate binding domain YZOS03_04090 PF07715 TonB-dependent Receptor Plug Domain YZOS03_04090 PF00593 TonB dependent receptor YZOS03_04100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YZOS03_04100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YZOS03_04110 PF00162 Phosphoglycerate kinase YZOS03_04120 PF01116 Fructose-bisphosphate aldolase class-II YZOS03_04130 PF05552 Conserved TM helix YZOS03_04130 PF00924 Mechanosensitive ion channel YZOS03_04150 PF01810 LysE type translocator YZOS03_04160 PF03466 LysR substrate binding domain YZOS03_04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_04170 PF04402 Protein of unknown function (DUF541) YZOS03_04180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YZOS03_04180 PF01842 ACT domain YZOS03_04180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YZOS03_04190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YZOS03_04200 PF01812 5-formyltetrahydrofolate cyclo-ligase family YZOS03_04210 PF05164 Cell division protein ZapA YZOS03_04220 PF03695 Uncharacterised protein family (UPF0149) YZOS03_04230 PF01494 FAD binding domain YZOS03_04240 PF01494 FAD binding domain YZOS03_04280 PF03937 Flavinator of succinate dehydrogenase YZOS03_04300 PF00890 FAD binding domain YZOS03_04300 PF02910 Fumarate reductase flavoprotein C-term YZOS03_04310 PF04542 Sigma-70 region 2 YZOS03_04310 PF08281 Sigma-70, region 4 YZOS03_04320 PF03873 Anti sigma-E protein RseA, C-terminal domain YZOS03_04320 PF03872 Anti sigma-E protein RseA, N-terminal domain YZOS03_04330 PF03888 MucB/RseB N-terminal domain YZOS03_04330 PF17188 MucB/RseB C-terminal domain YZOS03_04350 PF00679 Elongation factor G C-terminus YZOS03_04350 PF00009 Elongation factor Tu GTP binding domain YZOS03_04350 PF06421 GTP-binding protein LepA C-terminus YZOS03_04350 PF03144 Elongation factor Tu domain 2 YZOS03_04360 PF10502 Signal peptidase, peptidase S26 YZOS03_04370 PF00035 Double-stranded RNA binding motif YZOS03_04370 PF14622 Ribonuclease-III-like YZOS03_04380 PF07650 KH domain YZOS03_04380 PF01926 50S ribosome-binding GTPase YZOS03_04390 PF02565 Recombination protein O C terminal YZOS03_04390 PF11967 Recombination protein O N terminal YZOS03_04400 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YZOS03_04410 PF01648 4'-phosphopantetheinyl transferase superfamily YZOS03_04420 PF01627 Hpt domain YZOS03_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_04420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YZOS03_04420 PF00072 Response regulator receiver domain YZOS03_04420 PF00672 HAMP domain YZOS03_04420 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_04430 PF01938 TRAM domain YZOS03_04430 PF05958 tRNA (Uracil-5-)-methyltransferase YZOS03_04440 PF13291 ACT domain YZOS03_04440 PF04607 Region found in RelA / SpoT proteins YZOS03_04440 PF02824 TGS domain YZOS03_04450 PF03819 MazG nucleotide pyrophosphohydrolase domain YZOS03_04460 PF06418 CTP synthase N-terminus YZOS03_04460 PF00117 Glutamine amidotransferase class-I YZOS03_04470 PF03952 Enolase, N-terminal domain YZOS03_04470 PF00113 Enolase, C-terminal TIM barrel domain YZOS03_04480 PF04977 Septum formation initiator YZOS03_04490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YZOS03_04500 PF02542 YgbB family YZOS03_04510 PF01142 tRNA pseudouridine synthase D (TruD) YZOS03_04520 PF01975 Survival protein SurE YZOS03_04540 PF01476 LysM domain YZOS03_04540 PF01551 Peptidase family M23 YZOS03_04550 PF00140 Sigma-70 factor, region 1.2 YZOS03_04550 PF04542 Sigma-70 region 2 YZOS03_04550 PF04539 Sigma-70 region 3 YZOS03_04550 PF04545 Sigma-70, region 4 YZOS03_04560 PF01624 MutS domain I YZOS03_04560 PF05188 MutS domain II YZOS03_04560 PF05192 MutS domain III YZOS03_04560 PF05190 MutS family domain IV YZOS03_04560 PF00488 MutS domain V YZOS03_04570 PF02464 Competence-damaged protein YZOS03_04580 PF00154 recA bacterial DNA recombination protein YZOS03_04590 PF02631 RecX family YZOS03_04600 PF01411 tRNA synthetases class II (A) YZOS03_04600 PF02272 DHHA1 domain YZOS03_04600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YZOS03_04610 PF00696 Amino acid kinase family YZOS03_04610 PF01842 ACT domain YZOS03_04610 PF13840 ACT domain YZOS03_04620 PF02599 Global regulator protein family YZOS03_04630 PF04277 Oxaloacetate decarboxylase, gamma chain YZOS03_04640 PF00364 Biotin-requiring enzyme YZOS03_04640 PF00682 HMGL-like YZOS03_04640 PF02436 Conserved carboxylase domain YZOS03_04650 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit YZOS03_04660 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_04660 PF00107 Zinc-binding dehydrogenase YZOS03_04670 PF09335 SNARE associated Golgi protein YZOS03_04680 PF00675 Insulinase (Peptidase family M16) YZOS03_04680 PF05193 Peptidase M16 inactive domain YZOS03_04690 PF04262 Glutamate-cysteine ligase YZOS03_04710 PF02664 S-Ribosylhomocysteinase (LuxS) YZOS03_04720 PF01595 Cyclin M transmembrane N-terminal domain YZOS03_04720 PF03471 Transporter associated domain YZOS03_04720 PF00571 CBS domain YZOS03_04730 PF01578 Cytochrome C assembly protein YZOS03_04740 PF02978 Signal peptide binding domain YZOS03_04740 PF02881 SRP54-type protein, helical bundle domain YZOS03_04740 PF00448 SRP54-type protein, GTPase domain YZOS03_04750 PF00886 Ribosomal protein S16 YZOS03_04760 PF01782 RimM N-terminal domain YZOS03_04760 PF05239 PRC-barrel domain YZOS03_04770 PF01746 tRNA (Guanine-1)-methyltransferase YZOS03_04780 PF01245 Ribosomal protein L19 YZOS03_04790 PF03884 DNA gyrase inhibitor YacG YZOS03_04800 PF07072 Cell division protein YZOS03_04810 PF01121 Dephospho-CoA kinase YZOS03_04820 PF06750 Bacterial Peptidase A24 N-terminal domain YZOS03_04820 PF01478 Type IV leader peptidase family YZOS03_04830 PF00482 Type II secretion system (T2SS), protein F YZOS03_04840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YZOS03_04840 PF00437 Type II/IV secretion system protein YZOS03_04850 PF00114 Pilin (bacterial filament) YZOS03_04850 PF07963 Prokaryotic N-terminal methylation motif YZOS03_04860 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YZOS03_04860 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YZOS03_04870 PF01510 N-acetylmuramoyl-L-alanine amidase YZOS03_04880 PF00392 Bacterial regulatory proteins, gntR family YZOS03_04880 PF07729 FCD domain YZOS03_04890 PF17831 Pyruvate dehydrogenase E1 component middle domain YZOS03_04890 PF00456 Transketolase, thiamine diphosphate binding domain YZOS03_04900 PF02817 e3 binding domain YZOS03_04900 PF00364 Biotin-requiring enzyme YZOS03_04900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YZOS03_04910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YZOS03_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_04920 PF00440 Bacterial regulatory proteins, tetR family YZOS03_04930 PF00156 Phosphoribosyl transferase domain YZOS03_04940 PF00484 Carbonic anhydrase YZOS03_04950 PF01740 STAS domain YZOS03_04950 PF00916 Sulfate permease family YZOS03_04960 PF01740 STAS domain YZOS03_04960 PF00916 Sulfate permease family YZOS03_04970 PF00005 ABC transporter YZOS03_04980 PF00005 ABC transporter YZOS03_04990 PF01061 ABC-2 type transporter YZOS03_05000 PF03279 Bacterial lipid A biosynthesis acyltransferase YZOS03_05010 PF02569 Pantoate-beta-alanine ligase YZOS03_05020 PF02548 Ketopantoate hydroxymethyltransferase YZOS03_05030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YZOS03_05040 PF12626 Polymerase A arginine-rich C-terminus YZOS03_05040 PF01743 Poly A polymerase head domain YZOS03_05040 PF12627 Probable RNA and SrmB- binding site of polymerase A YZOS03_05050 PF00749 tRNA synthetases class I (E and Q), catalytic domain YZOS03_05060 PF01258 Prokaryotic dksA/traR C4-type zinc finger YZOS03_05070 PF03749 Sugar fermentation stimulation protein RE domain YZOS03_05070 PF17746 SfsA N-terminal OB domain YZOS03_05080 PF00271 Helicase conserved C-terminal domain YZOS03_05080 PF00270 DEAD/DEAH box helicase YZOS03_05080 PF04408 Helicase associated domain (HA2) YZOS03_05080 PF08482 ATP-dependent helicase C-terminal YZOS03_05090 PF00912 Transglycosylase YZOS03_05090 PF00905 Penicillin binding protein transpeptidase domain YZOS03_05090 PF14814 Bifunctional transglycosylase second domain YZOS03_05100 PF01734 Patatin-like phospholipase YZOS03_05110 PF00330 Aconitase family (aconitate hydratase) YZOS03_05110 PF06434 Aconitate hydratase 2 N-terminus YZOS03_05110 PF11791 Aconitate B N-terminal domain YZOS03_05120 PF06062 Uncharacterised protein family (UPF0231) YZOS03_05130 PF00543 Nitrogen regulatory protein P-II YZOS03_05140 PF00909 Ammonium Transporter Family YZOS03_05150 PF13416 Bacterial extracellular solute-binding protein YZOS03_05170 PF00005 ABC transporter YZOS03_05170 PF08402 TOBE domain YZOS03_05180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YZOS03_05180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YZOS03_05180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YZOS03_05180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YZOS03_05190 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain YZOS03_05190 PF06165 Glycosyltransferase family 36 YZOS03_05200 PF00728 Glycosyl hydrolase family 20, catalytic domain YZOS03_05200 PF02838 Glycosyl hydrolase family 20, domain 2 YZOS03_05210 PF01869 BadF/BadG/BcrA/BcrD ATPase family YZOS03_05230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_05230 PF00005 ABC transporter YZOS03_05240 PF00005 ABC transporter YZOS03_05240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_05250 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_05250 PF12911 N-terminal TM domain of oligopeptide transport permease C YZOS03_05260 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_05270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_05280 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_05280 PF09308 LuxQ, periplasmic YZOS03_05280 PF00072 Response regulator receiver domain YZOS03_05290 PF05175 Methyltransferase small domain YZOS03_05290 PF08468 Methyltransferase small domain N-terminal YZOS03_05300 PF01594 AI-2E family transporter YZOS03_05310 PF00202 Aminotransferase class-III YZOS03_05320 PF01521 Iron-sulphur cluster biosynthesis YZOS03_05340 PF00873 AcrB/AcrD/AcrF family YZOS03_05350 PF00873 AcrB/AcrD/AcrF family YZOS03_05360 PF08525 Opacity-associated protein A N-terminal motif YZOS03_05360 PF01476 LysM domain YZOS03_05360 PF01551 Peptidase family M23 YZOS03_05370 PF00579 tRNA synthetases class I (W and Y) YZOS03_05390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YZOS03_05400 PF13609 Gram-negative porin YZOS03_05410 PF01272 Transcription elongation factor, GreA/GreB, C-term YZOS03_05410 PF03449 Transcription elongation factor, N-terminal YZOS03_05420 PF01985 CRS1 / YhbY (CRM) domain YZOS03_05430 PF01728 FtsJ-like methyltransferase YZOS03_05440 PF01434 Peptidase family M41 YZOS03_05440 PF06480 FtsH Extracellular YZOS03_05440 PF17862 AAA+ lid domain YZOS03_05440 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_05450 PF00809 Pterin binding enzyme YZOS03_05460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YZOS03_05460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YZOS03_05460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YZOS03_05460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YZOS03_05480 PF03840 Preprotein translocase SecG subunit YZOS03_05490 PF17384 RimP C-terminal SH3 domain YZOS03_05490 PF02576 RimP N-terminal domain YZOS03_05500 PF00575 S1 RNA binding domain YZOS03_05500 PF08529 NusA N-terminal domain YZOS03_05500 PF13184 NusA-like KH domain YZOS03_05510 PF08364 Bacterial translation initiation factor IF-2 associated region YZOS03_05510 PF04760 Translation initiation factor IF-2, N-terminal region YZOS03_05510 PF11987 Translation-initiation factor 2 YZOS03_05510 PF00009 Elongation factor Tu GTP binding domain YZOS03_05520 PF02033 Ribosome-binding factor A YZOS03_05530 PF16198 tRNA pseudouridylate synthase B C-terminal domain YZOS03_05530 PF01509 TruB family pseudouridylate synthase (N terminal domain) YZOS03_05530 PF09157 Pseudouridine synthase II TruB, C-terminal YZOS03_05540 PF00312 Ribosomal protein S15 YZOS03_05550 PF00013 KH domain YZOS03_05550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YZOS03_05550 PF01138 3' exoribonuclease family, domain 1 YZOS03_05550 PF03725 3' exoribonuclease family, domain 2 YZOS03_05550 PF00575 S1 RNA binding domain YZOS03_05560 PF07719 Tetratricopeptide repeat YZOS03_05560 PF13181 Tetratricopeptide repeat YZOS03_05580 PF01554 MatE YZOS03_05590 PF01136 Peptidase family U32 YZOS03_05600 PF01136 Peptidase family U32 YZOS03_05610 PF03707 Bacterial signalling protein N terminal repeat YZOS03_05610 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_05610 PF00563 EAL domain YZOS03_05620 PF02036 SCP-2 sterol transfer family YZOS03_05630 PF13508 Acetyltransferase (GNAT) domain YZOS03_05670 PF16658 Class II release factor RF3, C-terminal domain YZOS03_05670 PF03144 Elongation factor Tu domain 2 YZOS03_05670 PF00009 Elongation factor Tu GTP binding domain YZOS03_05690 PF01026 TatD related DNase YZOS03_05700 PF01773 Na+ dependent nucleoside transporter N-terminus YZOS03_05700 PF07662 Na+ dependent nucleoside transporter C-terminus YZOS03_05700 PF07670 Nucleoside recognition YZOS03_05720 PF01791 DeoC/LacD family aldolase YZOS03_05730 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YZOS03_05730 PF00591 Glycosyl transferase family, a/b domain YZOS03_05730 PF02885 Glycosyl transferase family, helical bundle domain YZOS03_05740 PF01676 Metalloenzyme superfamily YZOS03_05750 PF01048 Phosphorylase superfamily YZOS03_05770 PF18429 Domain of unknown function (DUF5609) YZOS03_05790 PF18073 Rubredoxin metal binding domain YZOS03_05800 PF00009 Elongation factor Tu GTP binding domain YZOS03_05800 PF14492 Elongation Factor G, domain II YZOS03_05800 PF03144 Elongation factor Tu domain 2 YZOS03_05800 PF00679 Elongation factor G C-terminus YZOS03_05800 PF03764 Elongation factor G, domain IV YZOS03_05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_05810 PF03466 LysR substrate binding domain YZOS03_05830 PF00501 AMP-binding enzyme YZOS03_05890 PF00196 Bacterial regulatory proteins, luxR family YZOS03_05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_05910 PF03466 LysR substrate binding domain YZOS03_05920 PF00356 Bacterial regulatory proteins, lacI family YZOS03_05960 PF01544 CorA-like Mg2+ transporter protein YZOS03_05970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YZOS03_05970 PF01266 FAD dependent oxidoreductase YZOS03_05980 PF08220 DeoR-like helix-turn-helix domain YZOS03_05980 PF00455 DeoR C terminal sensor domain YZOS03_05990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YZOS03_05990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YZOS03_06000 PF00230 Major intrinsic protein YZOS03_06010 PF07690 Major Facilitator Superfamily YZOS03_06020 PF03009 Glycerophosphoryl diester phosphodiesterase family YZOS03_06030 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle YZOS03_06030 PF14602 Hexapeptide repeat of succinyl-transferase YZOS03_06060 PF07130 YebG protein YZOS03_06070 PF03466 LysR substrate binding domain YZOS03_06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_06090 PF11893 Domain of unknown function (DUF3413) YZOS03_06090 PF00884 Sulfatase YZOS03_06100 PF17946 RecC C-terminal domain YZOS03_06110 PF12705 PD-(D/E)XK nuclease superfamily YZOS03_06110 PF00580 UvrD/REP helicase N-terminal domain YZOS03_06110 PF13361 UvrD-like helicase C-terminal domain YZOS03_06120 PF13538 UvrD-like helicase C-terminal domain YZOS03_06160 PF00696 Amino acid kinase family YZOS03_06160 PF00583 Acetyltransferase (GNAT) family YZOS03_06180 PF06725 3D domain YZOS03_06180 PF03562 MltA specific insert domain YZOS03_06190 PF00899 ThiF family YZOS03_06200 PF02657 Fe-S metabolism associated domain YZOS03_06210 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_06210 PF17158 Membrane-associated sensor, integral membrane domain YZOS03_06220 PF00266 Aminotransferase class-V YZOS03_06230 PF01965 DJ-1/PfpI family YZOS03_06240 PF02558 Ketopantoate reductase PanE/ApbA YZOS03_06240 PF08546 Ketopantoate reductase PanE/ApbA C terminal YZOS03_06250 PF03502 Nucleoside-specific channel-forming protein, Tsx YZOS03_06280 PF04542 Sigma-70 region 2 YZOS03_06280 PF04545 Sigma-70, region 4 YZOS03_06300 PF07690 Major Facilitator Superfamily YZOS03_06310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YZOS03_06320 PF03923 Uncharacterized lipoprotein YZOS03_06320 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YZOS03_06330 PF05175 Methyltransferase small domain YZOS03_06340 PF01722 BolA-like protein YZOS03_06350 PF11973 NQRA C-terminal domain YZOS03_06350 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) YZOS03_06360 PF03116 NQR2, RnfD, RnfE family YZOS03_06370 PF04205 FMN-binding domain YZOS03_06380 PF02508 Rnf-Nqr subunit, membrane protein YZOS03_06390 PF02508 Rnf-Nqr subunit, membrane protein YZOS03_06400 PF00111 2Fe-2S iron-sulfur cluster binding domain YZOS03_06400 PF00970 Oxidoreductase FAD-binding domain YZOS03_06400 PF00175 Oxidoreductase NAD-binding domain YZOS03_06410 PF02424 ApbE family YZOS03_06430 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_06430 PF00072 Response regulator receiver domain YZOS03_06450 PF00817 impB/mucB/samB family YZOS03_06450 PF11798 IMS family HHH motif YZOS03_06450 PF11799 impB/mucB/samB family C-terminal domain YZOS03_06460 PF00271 Helicase conserved C-terminal domain YZOS03_06460 PF00270 DEAD/DEAH box helicase YZOS03_06460 PF00570 HRDC domain YZOS03_06460 PF16124 RecQ zinc-binding YZOS03_06460 PF09382 RQC domain YZOS03_06470 PF01272 Transcription elongation factor, GreA/GreB, C-term YZOS03_06470 PF03449 Transcription elongation factor, N-terminal YZOS03_06490 PF06483 Chitinase C YZOS03_06490 PF00704 Glycosyl hydrolases family 18 YZOS03_06500 PF00209 Sodium:neurotransmitter symporter family YZOS03_06520 PF06786 Uncharacterised protein family (UPF0253) YZOS03_06540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YZOS03_06540 PF04073 Aminoacyl-tRNA editing domain YZOS03_06540 PF03129 Anticodon binding domain YZOS03_06550 PF01980 tRNA-methyltransferase O YZOS03_06550 PF18389 TrmO C-terminal domain YZOS03_06560 PF01197 Ribosomal protein L31 YZOS03_06570 PF03806 AbgT putative transporter family YZOS03_06590 PF02142 MGS-like domain YZOS03_06590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YZOS03_06590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YZOS03_06620 PF01370 NAD dependent epimerase/dehydratase family YZOS03_06630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YZOS03_06630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YZOS03_06640 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 YZOS03_06690 PF00849 RNA pseudouridylate synthase YZOS03_06690 PF04287 tRNA pseudouridine synthase C YZOS03_06700 PF00849 RNA pseudouridylate synthase YZOS03_06710 PF11944 Protein of unknown function (DUF3461) YZOS03_06720 PF01909 Nucleotidyltransferase domain YZOS03_06720 PF01966 HD domain YZOS03_06720 PF08335 GlnD PII-uridylyltransferase YZOS03_06720 PF01842 ACT domain YZOS03_06730 PF00557 Metallopeptidase family M24 YZOS03_06740 PF00318 Ribosomal protein S2 YZOS03_06750 PF00889 Elongation factor TS YZOS03_06760 PF00696 Amino acid kinase family YZOS03_06770 PF01765 Ribosome recycling factor YZOS03_06780 PF01255 Putative undecaprenyl diphosphate synthase YZOS03_06800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YZOS03_06800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YZOS03_06800 PF13288 DXP reductoisomerase C-terminal domain YZOS03_06810 PF17820 PDZ domain YZOS03_06810 PF02163 Peptidase family M50 YZOS03_06820 PF01103 Surface antigen YZOS03_06820 PF07244 Surface antigen variable number repeat YZOS03_06830 PF03938 Outer membrane protein (OmpH-like) YZOS03_06840 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_06840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YZOS03_06850 PF07977 FabA-like domain YZOS03_06860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YZOS03_06860 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_06870 PF02684 Lipid-A-disaccharide synthetase YZOS03_06880 PF01351 Ribonuclease HII YZOS03_06890 PF01336 OB-fold nucleic acid binding domain YZOS03_06890 PF07733 Bacterial DNA polymerase III alpha NTPase domain YZOS03_06890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YZOS03_06890 PF14579 Helix-hairpin-helix motif YZOS03_06890 PF02811 PHP domain YZOS03_06900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YZOS03_06910 PF09179 TilS substrate binding domain YZOS03_06910 PF01171 PP-loop family YZOS03_06910 PF11734 TilS substrate C-terminal domain YZOS03_06920 PF00034 Cytochrome c YZOS03_06930 PF00543 Nitrogen regulatory protein P-II YZOS03_06940 PF03372 Endonuclease/Exonuclease/phosphatase family YZOS03_06960 PF01464 Transglycosylase SLT domain YZOS03_06960 PF01476 LysM domain YZOS03_06970 PF00753 Metallo-beta-lactamase superfamily YZOS03_06970 PF16123 Hydroxyacylglutathione hydrolase C-terminus YZOS03_06980 PF08241 Methyltransferase domain YZOS03_06990 PF00075 RNase H YZOS03_07000 PF00929 Exonuclease YZOS03_07050 PF00916 Sulfate permease family YZOS03_07050 PF01740 STAS domain YZOS03_07060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_07060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_07060 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_07060 PF09317 Domain of unknown function (DUF1974) YZOS03_07070 PF13580 SIS domain YZOS03_07080 PF13230 Glutamine amidotransferases class-II YZOS03_07090 PF00551 Formyl transferase YZOS03_07100 PF02769 AIR synthase related protein, C-terminal domain YZOS03_07100 PF00586 AIR synthase related protein, N-terminal domain YZOS03_07120 PF00860 Permease family YZOS03_07150 PF03358 NADPH-dependent FMN reductase YZOS03_07160 PF03960 ArsC family YZOS03_07170 PF01435 Peptidase family M48 YZOS03_07170 PF13181 Tetratricopeptide repeat YZOS03_07190 PF01594 AI-2E family transporter YZOS03_07200 PF00578 AhpC/TSA family YZOS03_07220 PF00701 Dihydrodipicolinate synthetase family YZOS03_07230 PF06804 NlpB/DapX lipoprotein YZOS03_07260 PF01546 Peptidase family M20/M25/M40 YZOS03_07260 PF07687 Peptidase dimerisation domain YZOS03_07270 PF03960 ArsC family YZOS03_07310 PF11143 Protein of unknown function (DUF2919) YZOS03_07320 PF04261 Dyp-type peroxidase family YZOS03_07330 PF00700 Bacterial flagellin C-terminal helical region YZOS03_07330 PF07196 Flagellin hook IN motif YZOS03_07330 PF00669 Bacterial flagellin N-terminal helical region YZOS03_07340 PF00700 Bacterial flagellin C-terminal helical region YZOS03_07340 PF07196 Flagellin hook IN motif YZOS03_07340 PF00669 Bacterial flagellin N-terminal helical region YZOS03_07350 PF07196 Flagellin hook IN motif YZOS03_07350 PF00700 Bacterial flagellin C-terminal helical region YZOS03_07350 PF00669 Bacterial flagellin N-terminal helical region YZOS03_07360 PF03646 FlaG protein YZOS03_07370 PF07196 Flagellin hook IN motif YZOS03_07370 PF07195 Flagellar hook-associated protein 2 C-terminus YZOS03_07370 PF02465 Flagellar hook-associated protein 2 N-terminus YZOS03_07390 PF02561 Flagellar protein FliS YZOS03_07400 PF00158 Sigma-54 interaction domain YZOS03_07400 PF06490 Flagellar regulatory protein FleQ YZOS03_07400 PF02954 Bacterial regulatory protein, Fis family YZOS03_07410 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_07410 PF13188 PAS domain YZOS03_07420 PF02954 Bacterial regulatory protein, Fis family YZOS03_07420 PF00072 Response regulator receiver domain YZOS03_07420 PF00158 Sigma-54 interaction domain YZOS03_07430 PF02049 Flagellar hook-basal body complex protein FliE YZOS03_07440 PF08345 Flagellar M-ring protein C-terminal YZOS03_07440 PF01514 Secretory protein of YscJ/FliF family YZOS03_07450 PF01706 FliG C-terminal domain YZOS03_07450 PF14841 FliG middle domain YZOS03_07450 PF14842 FliG N-terminal domain YZOS03_07470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_07470 PF18269 T3SS EscN ATPase C-terminal domain YZOS03_07520 PF02154 Flagellar motor switch protein FliM YZOS03_07520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YZOS03_07530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YZOS03_07540 PF04347 Flagellar biosynthesis protein, FliO YZOS03_07550 PF00813 FliP family YZOS03_07560 PF01313 Bacterial export proteins, family 3 YZOS03_07570 PF01311 Bacterial export proteins, family 1 YZOS03_07580 PF01312 FlhB HrpN YscU SpaS Family YZOS03_07590 PF00771 FHIPEP family YZOS03_07600 PF00448 SRP54-type protein, GTPase domain YZOS03_07600 PF00448 SRP54-type protein, GTPase domain YZOS03_07610 PF10609 NUBPL iron-transfer P-loop NTPase YZOS03_07620 PF04539 Sigma-70 region 3 YZOS03_07620 PF04545 Sigma-70, region 4 YZOS03_07620 PF04542 Sigma-70 region 2 YZOS03_07630 PF00072 Response regulator receiver domain YZOS03_07640 PF04344 Chemotaxis phosphatase, CheZ YZOS03_07650 PF01627 Hpt domain YZOS03_07650 PF00072 Response regulator receiver domain YZOS03_07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_07650 PF01584 CheW-like domain YZOS03_07650 PF02895 Signal transducing histidine kinase, homodimeric domain YZOS03_07660 PF01339 CheB methylesterase YZOS03_07660 PF00072 Response regulator receiver domain YZOS03_07670 PF13614 AAA domain YZOS03_07690 PF01584 CheW-like domain YZOS03_07710 PF00005 ABC transporter YZOS03_07720 PF03379 CcmB protein YZOS03_07730 PF01578 Cytochrome C assembly protein YZOS03_07740 PF04995 Heme exporter protein D (CcmD) YZOS03_07750 PF03100 CcmE YZOS03_07760 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YZOS03_07760 PF01578 Cytochrome C assembly protein YZOS03_07770 PF08534 Redoxin YZOS03_07780 PF03918 Cytochrome C biogenesis protein YZOS03_07790 PF03918 Cytochrome C biogenesis protein YZOS03_07800 PF04333 MlaA lipoprotein YZOS03_07810 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YZOS03_07820 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YZOS03_07840 PF04542 Sigma-70 region 2 YZOS03_07840 PF08281 Sigma-70, region 4 YZOS03_07860 PF02803 Thiolase, C-terminal domain YZOS03_07860 PF00108 Thiolase, N-terminal domain YZOS03_07870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YZOS03_07870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YZOS03_07870 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_07890 PF00675 Insulinase (Peptidase family M16) YZOS03_07890 PF05193 Peptidase M16 inactive domain YZOS03_07890 PF16187 Middle or third domain of peptidase_M16 YZOS03_07900 PF00300 Histidine phosphatase superfamily (branch 1) YZOS03_07910 PF01713 Smr domain YZOS03_07920 PF05175 Methyltransferase small domain YZOS03_07930 PF01264 Chorismate synthase YZOS03_07940 PF03458 UPF0126 domain YZOS03_07960 PF04315 Elongation factor P hydroxylase YZOS03_07970 PF08891 YfcL protein YZOS03_07980 PF03358 NADPH-dependent FMN reductase YZOS03_07990 PF01266 FAD dependent oxidoreductase YZOS03_07990 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YZOS03_08000 PF00109 Beta-ketoacyl synthase, N-terminal domain YZOS03_08000 PF02801 Beta-ketoacyl synthase, C-terminal domain YZOS03_08010 PF11890 Domain of unknown function (DUF3410) YZOS03_08010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YZOS03_08010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YZOS03_08020 PF01118 Semialdehyde dehydrogenase, NAD binding domain YZOS03_08020 PF02774 Semialdehyde dehydrogenase, dimerisation domain YZOS03_08040 PF01416 tRNA pseudouridine synthase YZOS03_08050 PF01039 Carboxyl transferase domain YZOS03_08050 PF17848 Acetyl-coA carboxylase zinc finger domain YZOS03_08060 PF02875 Mur ligase family, glutamate ligase domain YZOS03_08060 PF08245 Mur ligase middle domain YZOS03_08070 PF05036 Sporulation related domain YZOS03_08080 PF02674 Colicin V production protein YZOS03_08090 PF00156 Phosphoribosyl transferase domain YZOS03_08100 PF03466 LysR substrate binding domain YZOS03_08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_08110 PF00072 Response regulator receiver domain YZOS03_08140 PF00156 Phosphoribosyl transferase domain YZOS03_08150 PF12169 DNA polymerase III subunits gamma and tau domain III YZOS03_08150 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding YZOS03_08150 PF12170 DNA polymerase III tau subunit V interacting with alpha YZOS03_08160 PF02575 YbaB/EbfC DNA-binding family YZOS03_08170 PF02132 RecR protein YZOS03_08170 PF13662 Toprim domain YZOS03_08180 PF00230 Major intrinsic protein YZOS03_08190 PF03692 Putative zinc- or iron-chelating domain YZOS03_08200 PF04226 Transglycosylase associated protein YZOS03_08210 PF03692 Putative zinc- or iron-chelating domain YZOS03_08220 PF00924 Mechanosensitive ion channel YZOS03_08220 PF05552 Conserved TM helix YZOS03_08230 PF03992 Antibiotic biosynthesis monooxygenase YZOS03_08240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_08260 PF00245 Alkaline phosphatase YZOS03_08290 PF13847 Methyltransferase domain YZOS03_08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_08300 PF08447 PAS fold YZOS03_08300 PF13426 PAS domain YZOS03_08310 PF01263 Aldose 1-epimerase YZOS03_08320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YZOS03_08320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YZOS03_08330 PF01641 SelR domain YZOS03_08350 PF07023 Protein of unknown function (DUF1315) YZOS03_08360 PF00710 Asparaginase, N-terminal YZOS03_08360 PF17763 Glutaminase/Asparaginase C-terminal domain YZOS03_08370 PF01343 Peptidase family S49 YZOS03_08380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YZOS03_08380 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_08400 PF00881 Nitroreductase family YZOS03_08410 PF01131 DNA topoisomerase YZOS03_08410 PF01751 Toprim domain YZOS03_08430 PF00106 short chain dehydrogenase YZOS03_08440 PF00850 Histone deacetylase domain YZOS03_08450 PF00884 Sulfatase YZOS03_08450 PF11893 Domain of unknown function (DUF3413) YZOS03_08460 PF07208 Protein of unknown function (DUF1414) YZOS03_08470 PF04245 37-kD nucleoid-associated bacterial protein YZOS03_08500 PF03553 Na+/H+ antiporter family YZOS03_08510 PF02774 Semialdehyde dehydrogenase, dimerisation domain YZOS03_08510 PF01118 Semialdehyde dehydrogenase, NAD binding domain YZOS03_08520 PF00520 Ion transport protein YZOS03_08520 PF00027 Cyclic nucleotide-binding domain YZOS03_08530 PF01914 MarC family integral membrane protein YZOS03_08540 PF00465 Iron-containing alcohol dehydrogenase YZOS03_08540 PF00171 Aldehyde dehydrogenase family YZOS03_08570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YZOS03_08570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YZOS03_08580 PF00462 Glutaredoxin YZOS03_08600 PF13726 Na+-H+ antiporter family YZOS03_08600 PF03553 Na+/H+ antiporter family YZOS03_08610 PF00929 Exonuclease YZOS03_08620 PF00691 OmpA family YZOS03_08620 PF18393 MotY N-terminal domain YZOS03_08630 PF10952 Protein of unknown function (DUF2753) YZOS03_08640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_08650 PF00730 HhH-GPD superfamily base excision DNA repair protein YZOS03_08650 PF00633 Helix-hairpin-helix motif YZOS03_08650 PF10576 Iron-sulfur binding domain of endonuclease III YZOS03_08660 PF02508 Rnf-Nqr subunit, membrane protein YZOS03_08670 PF04205 FMN-binding domain YZOS03_08680 PF03116 NQR2, RnfD, RnfE family YZOS03_08690 PF13375 RnfC Barrel sandwich hybrid domain YZOS03_08690 PF12838 4Fe-4S dicluster domain YZOS03_08690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YZOS03_08690 PF10531 SLBB domain YZOS03_08700 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YZOS03_08700 PF10531 SLBB domain YZOS03_08700 PF13375 RnfC Barrel sandwich hybrid domain YZOS03_08700 PF12838 4Fe-4S dicluster domain YZOS03_08710 PF04060 Putative Fe-S cluster YZOS03_08720 PF02508 Rnf-Nqr subunit, membrane protein YZOS03_08730 PF02901 Pyruvate formate lyase-like YZOS03_08730 PF01228 Glycine radical YZOS03_08740 PF00271 Helicase conserved C-terminal domain YZOS03_08740 PF17757 UvrB interaction domain YZOS03_08740 PF12344 Ultra-violet resistance protein B YZOS03_08740 PF02151 UvrB/uvrC motif YZOS03_08740 PF04851 Type III restriction enzyme, res subunit YZOS03_08750 PF00072 Response regulator receiver domain YZOS03_08750 PF00158 Sigma-54 interaction domain YZOS03_08750 PF02954 Bacterial regulatory protein, Fis family YZOS03_08760 PF01627 Hpt domain YZOS03_08770 PF01933 Uncharacterised protein family UPF0052 YZOS03_08780 PF04055 Radical SAM superfamily YZOS03_08780 PF06463 Molybdenum Cofactor Synthesis C YZOS03_08790 PF00994 Probable molybdopterin binding domain YZOS03_08800 PF01967 MoaC family YZOS03_08810 PF02597 ThiS family YZOS03_08820 PF02391 MoaE protein YZOS03_08830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_08840 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_08850 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_08850 PF12911 N-terminal TM domain of oligopeptide transport permease C YZOS03_08860 PF00005 ABC transporter YZOS03_08860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_08870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_08870 PF00005 ABC transporter YZOS03_08880 PF13409 Glutathione S-transferase, N-terminal domain YZOS03_08900 PF01515 Phosphate acetyl/butaryl transferase YZOS03_08900 PF07085 DRTGG domain YZOS03_08910 PF00871 Acetokinase family YZOS03_08920 PF04217 Protein of unknown function, DUF412 YZOS03_08940 PF02653 Branched-chain amino acid transport system / permease component YZOS03_08950 PF00005 ABC transporter YZOS03_08960 PF02903 Alpha amylase, N-terminal ig-like domain YZOS03_08960 PF00128 Alpha amylase, catalytic domain YZOS03_08970 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_08970 PF17158 Membrane-associated sensor, integral membrane domain YZOS03_08980 PF01207 Dihydrouridine synthase (Dus) YZOS03_08990 PF02810 SEC-C motif YZOS03_08990 PF03695 Uncharacterised protein family (UPF0149) YZOS03_09000 PF02600 Disulfide bond formation protein DsbB YZOS03_09010 PF06450 Bacterial Na+/H+ antiporter B (NhaB) YZOS03_09020 PF07840 FadR C-terminal domain YZOS03_09020 PF00392 Bacterial regulatory proteins, gntR family YZOS03_09040 PF01588 Putative tRNA binding domain YZOS03_09040 PF09334 tRNA synthetases class I (M) YZOS03_09050 PF10609 NUBPL iron-transfer P-loop NTPase YZOS03_09060 PF00485 Phosphoribulokinase / Uridine kinase family YZOS03_09080 PF12557 Cob(I)alamin adenosyltransferase N terminal YZOS03_09080 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YZOS03_09090 PF01451 Low molecular weight phosphotyrosine protein phosphatase YZOS03_09100 PF00916 Sulfate permease family YZOS03_09100 PF01740 STAS domain YZOS03_09110 PF12111 Polyribonucleotide phosphorylase C terminal YZOS03_09110 PF10150 Ribonuclease E/G family YZOS03_09110 PF00575 S1 RNA binding domain YZOS03_09120 PF01479 S4 domain YZOS03_09120 PF00849 RNA pseudouridylate synthase YZOS03_09130 PF02545 Maf-like protein YZOS03_09140 PF02620 Large ribosomal RNA subunit accumulation protein YceD YZOS03_09150 PF01783 Ribosomal L32p protein family YZOS03_09160 PF02504 Fatty acid synthesis protein YZOS03_09170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YZOS03_09170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YZOS03_09180 PF00698 Acyl transferase domain YZOS03_09200 PF00550 Phosphopantetheine attachment site YZOS03_09210 PF00109 Beta-ketoacyl synthase, N-terminal domain YZOS03_09210 PF02801 Beta-ketoacyl synthase, C-terminal domain YZOS03_09220 PF01063 Amino-transferase class IV YZOS03_09230 PF02618 YceG-like family YZOS03_09240 PF02223 Thymidylate kinase YZOS03_09250 PF09115 DNA polymerase III, delta subunit, C terminal YZOS03_09260 PF01026 TatD related DNase YZOS03_09270 PF02378 Phosphotransferase system, EIIC YZOS03_09270 PF00367 phosphotransferase system, EIIB YZOS03_09290 PF00209 Sodium:neurotransmitter symporter family YZOS03_09310 PF01734 Patatin-like phospholipase YZOS03_09320 PF02887 Pyruvate kinase, alpha/beta domain YZOS03_09320 PF00224 Pyruvate kinase, barrel domain YZOS03_09330 PF00480 ROK family YZOS03_09340 PF01584 CheW-like domain YZOS03_09340 PF00072 Response regulator receiver domain YZOS03_09350 PF14579 Helix-hairpin-helix motif YZOS03_09350 PF07733 Bacterial DNA polymerase III alpha NTPase domain YZOS03_09350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YZOS03_09350 PF02811 PHP domain YZOS03_09350 PF01336 OB-fold nucleic acid binding domain YZOS03_09380 PF00106 short chain dehydrogenase YZOS03_09390 PF01343 Peptidase family S49 YZOS03_09390 PF08496 Peptidase family S49 N-terminal YZOS03_09400 PF02224 Cytidylate kinase YZOS03_09410 PF00575 S1 RNA binding domain YZOS03_09420 PF00216 Bacterial DNA-binding protein YZOS03_09430 PF06305 Lipopolysaccharide assembly protein A domain YZOS03_09440 PF18073 Rubredoxin metal binding domain YZOS03_09450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YZOS03_09460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_09500 PF02470 MlaD protein YZOS03_09510 PF04403 Paraquat-inducible protein A YZOS03_09520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YZOS03_09530 PF00034 Cytochrome c YZOS03_09540 PF00384 Molybdopterin oxidoreductase YZOS03_09540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YZOS03_09540 PF01568 Molydopterin dinucleotide binding domain YZOS03_09550 PF03916 Polysulphide reductase, NrfD YZOS03_09560 PF13247 4Fe-4S dicluster domain YZOS03_09570 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_09580 PF00072 Response regulator receiver domain YZOS03_09580 PF00196 Bacterial regulatory proteins, luxR family YZOS03_09600 PF02683 Cytochrome C biogenesis protein transmembrane region YZOS03_09600 PF11412 Disulphide bond corrector protein DsbC YZOS03_09610 PF00085 Thioredoxin YZOS03_09630 PF05958 tRNA (Uracil-5-)-methyltransferase YZOS03_09660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_09680 PF12704 MacB-like periplasmic core domain YZOS03_09680 PF02687 FtsX-like permease family YZOS03_09680 PF00005 ABC transporter YZOS03_09700 PF12704 MacB-like periplasmic core domain YZOS03_09700 PF02687 FtsX-like permease family YZOS03_09700 PF00005 ABC transporter YZOS03_09710 PF12704 MacB-like periplasmic core domain YZOS03_09710 PF02687 FtsX-like permease family YZOS03_09720 PF02687 FtsX-like permease family YZOS03_09720 PF12704 MacB-like periplasmic core domain YZOS03_09720 PF00005 ABC transporter YZOS03_09760 PF08267 Cobalamin-independent synthase, N-terminal domain YZOS03_09760 PF01717 Cobalamin-independent synthase, Catalytic domain YZOS03_09780 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_09790 PF03466 LysR substrate binding domain YZOS03_09820 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_09820 PF00672 HAMP domain YZOS03_09830 PF00486 Transcriptional regulatory protein, C terminal YZOS03_09830 PF00072 Response regulator receiver domain YZOS03_09840 PF00535 Glycosyl transferase family 2 YZOS03_09850 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase YZOS03_09900 PF08497 Radical SAM N-terminal YZOS03_09900 PF04055 Radical SAM superfamily YZOS03_09900 PF11842 Domain of unknown function (DUF3362) YZOS03_09910 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_09910 PF08448 PAS fold YZOS03_09910 PF00563 EAL domain YZOS03_09910 PF08447 PAS fold YZOS03_09940 PF03466 LysR substrate binding domain YZOS03_09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_09950 PF08267 Cobalamin-independent synthase, N-terminal domain YZOS03_09950 PF01717 Cobalamin-independent synthase, Catalytic domain YZOS03_09970 PF03795 YCII-related domain YZOS03_09980 PF03061 Thioesterase superfamily YZOS03_09990 PF04279 Intracellular septation protein A YZOS03_10010 PF00072 Response regulator receiver domain YZOS03_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_10020 PF17327 Acyl homoserine lactone synthase YZOS03_10030 PF00375 Sodium:dicarboxylate symporter family YZOS03_10040 PF00501 AMP-binding enzyme YZOS03_10040 PF13193 AMP-binding enzyme C-terminal domain YZOS03_10050 PF00027 Cyclic nucleotide-binding domain YZOS03_10050 PF13545 Crp-like helix-turn-helix domain YZOS03_10060 PF00290 Tryptophan synthase alpha chain YZOS03_10070 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_10080 PF00218 Indole-3-glycerol phosphate synthase YZOS03_10080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YZOS03_10090 PF00591 Glycosyl transferase family, a/b domain YZOS03_10090 PF02885 Glycosyl transferase family, helical bundle domain YZOS03_10100 PF00117 Glutamine amidotransferase class-I YZOS03_10110 PF00425 chorismate binding enzyme YZOS03_10110 PF04715 Anthranilate synthase component I, N terminal region YZOS03_10120 PF02811 PHP domain YZOS03_10130 PF01300 Telomere recombination YZOS03_10150 PF01479 S4 domain YZOS03_10150 PF00849 RNA pseudouridylate synthase YZOS03_10160 PF04269 Protein of unknown function, DUF440 YZOS03_10170 PF01132 Elongation factor P (EF-P) OB domain YZOS03_10170 PF09285 Elongation factor P, C-terminal YZOS03_10170 PF08207 Elongation factor P (EF-P) KOW-like domain YZOS03_10190 PF00136 DNA polymerase family B YZOS03_10190 PF03104 DNA polymerase family B, exonuclease domain YZOS03_10200 PF00072 Response regulator receiver domain YZOS03_10200 PF00196 Bacterial regulatory proteins, luxR family YZOS03_10210 PF02151 UvrB/uvrC motif YZOS03_10210 PF08459 UvrC Helix-hairpin-helix N-terminal YZOS03_10210 PF01541 GIY-YIG catalytic domain YZOS03_10220 PF01066 CDP-alcohol phosphatidyltransferase YZOS03_10240 PF00202 Aminotransferase class-III YZOS03_10250 PF03435 Saccharopine dehydrogenase NADP binding domain YZOS03_10250 PF16653 Saccharopine dehydrogenase C-terminal domain YZOS03_10260 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YZOS03_10290 PF00994 Probable molybdopterin binding domain YZOS03_10310 PF00268 Ribonucleotide reductase, small chain YZOS03_10320 PF00317 Ribonucleotide reductase, all-alpha domain YZOS03_10320 PF03477 ATP cone domain YZOS03_10320 PF02867 Ribonucleotide reductase, barrel domain YZOS03_10340 PF00521 DNA gyrase/topoisomerase IV, subunit A YZOS03_10340 PF03989 DNA gyrase C-terminal domain, beta-propeller YZOS03_10370 PF02335 Cytochrome c552 YZOS03_10390 PF13247 4Fe-4S dicluster domain YZOS03_10400 PF03916 Polysulphide reductase, NrfD YZOS03_10410 PF01578 Cytochrome C assembly protein YZOS03_10410 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YZOS03_10420 PF08534 Redoxin YZOS03_10430 PF03918 Cytochrome C biogenesis protein YZOS03_10450 PF00925 GTP cyclohydrolase II YZOS03_10500 PF01471 Putative peptidoglycan binding domain YZOS03_10500 PF03734 L,D-transpeptidase catalytic domain YZOS03_10510 PF05951 Bacterial protein of unknown function (DUF882) YZOS03_10520 PF00753 Metallo-beta-lactamase superfamily YZOS03_10550 PF03480 Bacterial extracellular solute-binding protein, family 7 YZOS03_10570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YZOS03_10580 PF17200 Single Cache domain 2 YZOS03_10580 PF07730 Histidine kinase YZOS03_10590 PF00196 Bacterial regulatory proteins, luxR family YZOS03_10590 PF00072 Response regulator receiver domain YZOS03_10610 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_10620 PF00672 HAMP domain YZOS03_10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_10660 PF00155 Aminotransferase class I and II YZOS03_10690 PF00155 Aminotransferase class I and II YZOS03_10690 PF00392 Bacterial regulatory proteins, gntR family YZOS03_10710 PF00152 tRNA synthetases class II (D, K and N) YZOS03_10710 PF01336 OB-fold nucleic acid binding domain YZOS03_10720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_10720 PF17200 Single Cache domain 2 YZOS03_10720 PF00672 HAMP domain YZOS03_10730 PF01242 6-pyruvoyl tetrahydropterin synthase YZOS03_10750 PF04940 Sensors of blue-light using FAD YZOS03_10750 PF00563 EAL domain YZOS03_10760 PF03315 Serine dehydratase beta chain YZOS03_10760 PF03313 Serine dehydratase alpha chain YZOS03_10770 PF03222 Tryptophan/tyrosine permease family YZOS03_10780 PF00293 NUDIX domain YZOS03_10800 PF00072 Response regulator receiver domain YZOS03_10800 PF09308 LuxQ, periplasmic YZOS03_10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_10800 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_10810 PF04715 Anthranilate synthase component I, N terminal region YZOS03_10810 PF00425 chorismate binding enzyme YZOS03_10850 PF04317 YcjX-like family, DUF463 YZOS03_10860 PF05128 Domain of unknown function (DUF697) YZOS03_10870 PF18024 Helix-turn-helix domain YZOS03_10870 PF00158 Sigma-54 interaction domain YZOS03_10880 PF13302 Acetyltransferase (GNAT) domain YZOS03_10910 PF13495 Phage integrase, N-terminal SAM-like domain YZOS03_10910 PF00589 Phage integrase family YZOS03_10980 PF13614 AAA domain YZOS03_11440 PF13286 Phosphohydrolase-associated domain YZOS03_11440 PF01966 HD domain YZOS03_11630 PF12796 Ankyrin repeats (3 copies) YZOS03_11650 PF14338 Mrr N-terminal domain YZOS03_11650 PF04471 Restriction endonuclease YZOS03_11740 PF05016 ParE toxin of type II toxin-antitoxin system, parDE YZOS03_11860 PF15935 RNase LS, bacterial toxin YZOS03_11980 PF14602 Hexapeptide repeat of succinyl-transferase YZOS03_11980 PF12464 Maltose acetyltransferase YZOS03_11990 PF13302 Acetyltransferase (GNAT) domain YZOS03_12000 PF02272 DHHA1 domain YZOS03_12000 PF01411 tRNA synthetases class II (A) YZOS03_12000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YZOS03_12040 PF07237 Protein of unknown function (DUF1428) YZOS03_12050 PF01810 LysE type translocator YZOS03_12060 PF01810 LysE type translocator YZOS03_12070 PF11008 Protein of unknown function (DUF2846) YZOS03_12080 PF01103 Surface antigen YZOS03_12080 PF17243 POTRA domain TamA domain 1 YZOS03_12090 PF13091 PLD-like domain YZOS03_12100 PF00135 Carboxylesterase family YZOS03_12130 PF13533 Biotin-lipoyl like YZOS03_12150 PF06826 Predicted Permease Membrane Region YZOS03_12150 PF02080 TrkA-C domain YZOS03_12160 PF00155 Aminotransferase class I and II YZOS03_12170 PF08543 Phosphomethylpyrimidine kinase YZOS03_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_12200 PF03466 LysR substrate binding domain YZOS03_12230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_12260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_12260 PF00989 PAS fold YZOS03_12260 PF17203 Single cache domain 3 YZOS03_12260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YZOS03_12270 PF00072 Response regulator receiver domain YZOS03_12270 PF12431 Transcriptional regulator YZOS03_12280 PF00593 TonB dependent receptor YZOS03_12280 PF07715 TonB-dependent Receptor Plug Domain YZOS03_12290 PF02311 AraC-like ligand binding domain YZOS03_12290 PF12833 Helix-turn-helix domain YZOS03_12300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YZOS03_12300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YZOS03_12310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YZOS03_12320 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YZOS03_12320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YZOS03_12360 PF00158 Sigma-54 interaction domain YZOS03_12360 PF02954 Bacterial regulatory protein, Fis family YZOS03_12360 PF01590 GAF domain YZOS03_12370 PF00171 Aldehyde dehydrogenase family YZOS03_12410 PF12833 Helix-turn-helix domain YZOS03_12440 PF00263 Bacterial type II and III secretion system protein YZOS03_12440 PF03958 Bacterial type II/III secretion system short domain YZOS03_12450 PF16697 Inner membrane component of T3SS, cytoplasmic domain YZOS03_12450 PF16693 Inner membrane component of T3SS, periplasmic domain YZOS03_12470 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF YZOS03_12480 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) YZOS03_12500 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI YZOS03_12510 PF01514 Secretory protein of YscJ/FliF family YZOS03_12530 PF02108 Flagellar assembly protein FliH YZOS03_12550 PF02661 Fic/DOC family YZOS03_12610 PF12852 Cupin YZOS03_12610 PF12833 Helix-turn-helix domain YZOS03_12620 PF01312 FlhB HrpN YscU SpaS Family YZOS03_12630 PF01311 Bacterial export proteins, family 1 YZOS03_12640 PF01313 Bacterial export proteins, family 3 YZOS03_12650 PF00813 FliP family YZOS03_12660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YZOS03_12690 PF18269 T3SS EscN ATPase C-terminal domain YZOS03_12690 PF02874 ATP synthase alpha/beta family, beta-barrel domain YZOS03_12690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_12710 PF09059 TyeA YZOS03_12750 PF00771 FHIPEP family YZOS03_12760 PF09621 Type III secretion system regulator (LcrR) YZOS03_12780 PF04792 V antigen (LcrV) protein YZOS03_12790 PF07720 Tetratricopeptide repeat YZOS03_12810 PF05844 YopD protein YZOS03_12820 PF16868 NMT1-like family YZOS03_12830 PF01925 Sulfite exporter TauE/SafE YZOS03_12850 PF01970 Tripartite tricarboxylate transporter TctA family YZOS03_12910 PF00285 Citrate synthase, C-terminal domain YZOS03_12920 PF00694 Aconitase C-terminal domain YZOS03_12920 PF00330 Aconitase family (aconitate hydratase) YZOS03_12930 PF00330 Aconitase family (aconitate hydratase) YZOS03_12930 PF00694 Aconitase C-terminal domain YZOS03_12940 PF04303 PrpF protein YZOS03_12950 PF16177 Acetyl-coenzyme A synthetase N-terminus YZOS03_12950 PF00501 AMP-binding enzyme YZOS03_12950 PF13193 AMP-binding enzyme C-terminal domain YZOS03_12970 PF00089 Trypsin YZOS03_13000 PF04055 Radical SAM superfamily YZOS03_13010 PF06508 Queuosine biosynthesis protein QueC YZOS03_13030 PF01810 LysE type translocator YZOS03_13040 PF03466 LysR substrate binding domain YZOS03_13040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_13060 PF03466 LysR substrate binding domain YZOS03_13070 PF00873 AcrB/AcrD/AcrF family YZOS03_13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_13100 PF03466 LysR substrate binding domain YZOS03_13110 PF00267 Gram-negative porin YZOS03_13140 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_13150 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_13160 PF00005 ABC transporter YZOS03_13170 PF02965 Vitamin B12 dependent methionine synthase, activation domain YZOS03_13170 PF02310 B12 binding domain YZOS03_13170 PF02607 B12 binding domain YZOS03_13170 PF00809 Pterin binding enzyme YZOS03_13170 PF02574 Homocysteine S-methyltransferase YZOS03_13180 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_13180 PF00107 Zinc-binding dehydrogenase YZOS03_13200 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_13210 PF00857 Isochorismatase family YZOS03_13220 PF12833 Helix-turn-helix domain YZOS03_13220 PF02311 AraC-like ligand binding domain YZOS03_13240 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_13240 PF00107 Zinc-binding dehydrogenase YZOS03_13260 PF07690 Major Facilitator Superfamily YZOS03_13270 PF03466 LysR substrate binding domain YZOS03_13270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_13290 PF03466 LysR substrate binding domain YZOS03_13290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_13300 PF00248 Aldo/keto reductase family YZOS03_13320 PF09339 IclR helix-turn-helix domain YZOS03_13320 PF01614 Bacterial transcriptional regulator YZOS03_13330 PF13185 GAF domain YZOS03_13330 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_13350 PF00691 OmpA family YZOS03_13350 PF05736 OprF membrane domain YZOS03_13380 PF00691 OmpA family YZOS03_13410 PF10672 S-adenosylmethionine-dependent methyltransferase YZOS03_13410 PF17785 PUA-like domain YZOS03_13420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_13420 PF00672 HAMP domain YZOS03_13420 PF02743 Cache domain YZOS03_13430 PF00708 Acylphosphatase YZOS03_13440 PF04358 DsrC like protein YZOS03_13460 PF01027 Inhibitor of apoptosis-promoting Bax1 YZOS03_13470 PF00005 ABC transporter YZOS03_13480 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_13490 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_13500 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_13510 PF10414 Sirohaem synthase dimerisation region YZOS03_13510 PF14824 Sirohaem biosynthesis protein central YZOS03_13510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YZOS03_13520 PF04461 Protein of unknown function (DUF520) YZOS03_13530 PF00793 DAHP synthetase I family YZOS03_13570 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF YZOS03_13570 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF YZOS03_13570 PF01189 16S rRNA methyltransferase RsmB/F YZOS03_13580 PF02470 MlaD protein YZOS03_13590 PF04403 Paraquat-inducible protein A YZOS03_13600 PF00664 ABC transporter transmembrane region YZOS03_13600 PF00005 ABC transporter YZOS03_13610 PF13185 GAF domain YZOS03_13620 PF04352 ProQ/FINO family YZOS03_13620 PF17516 ProQ C-terminal domain YZOS03_13630 PF11818 C-terminal domain of tail specific protease (DUF3340) YZOS03_13630 PF00595 PDZ domain YZOS03_13630 PF03572 Peptidase family S41 YZOS03_13630 PF17804 Tail specific protease N-terminal domain YZOS03_13650 PF01433 Peptidase family M1 domain YZOS03_13650 PF11940 Domain of unknown function (DUF3458) Ig-like fold YZOS03_13650 PF17432 Domain of unknown function (DUF3458_C) ARM repeats YZOS03_13660 PF05088 Bacterial NAD-glutamate dehydrogenase YZOS03_13670 PF01180 Dihydroorotate dehydrogenase YZOS03_13680 PF07126 Cell-division protein ZapC YZOS03_13690 PF10672 S-adenosylmethionine-dependent methyltransferase YZOS03_13690 PF02926 THUMP domain YZOS03_13690 PF01170 Putative RNA methylase family UPF0020 YZOS03_13710 PF00005 ABC transporter YZOS03_13710 PF16326 ABC transporter C-terminal domain YZOS03_13710 PF12848 ABC transporter YZOS03_13730 PF04957 Ribosome modulation factor YZOS03_13740 PF07977 FabA-like domain YZOS03_13750 PF13654 AAA domain YZOS03_13750 PF05362 Lon protease (S16) C-terminal proteolytic domain YZOS03_13760 PF17414 MatP C-terminal ribbon-helix-helix domain YZOS03_13760 PF06303 MatP N-terminal domain YZOS03_13810 PF05707 Zonular occludens toxin (Zot) YZOS03_14170 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_14170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_14170 PF00072 Response regulator receiver domain YZOS03_14170 PF09308 LuxQ, periplasmic YZOS03_14200 PF00115 Cytochrome C and Quinol oxidase polypeptide I YZOS03_14230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YZOS03_14230 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP YZOS03_14250 PF00403 Heavy-metal-associated domain YZOS03_14280 PF13545 Crp-like helix-turn-helix domain YZOS03_14280 PF00027 Cyclic nucleotide-binding domain YZOS03_14290 PF00582 Universal stress protein family YZOS03_14300 PF01171 PP-loop family YZOS03_14340 PF08402 TOBE domain YZOS03_14340 PF00005 ABC transporter YZOS03_14350 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_14360 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_14370 PF13416 Bacterial extracellular solute-binding protein YZOS03_14380 PF13416 Bacterial extracellular solute-binding protein YZOS03_14390 PF02146 Sir2 family YZOS03_14410 PF00909 Ammonium Transporter Family YZOS03_14430 PF05593 RHS Repeat YZOS03_14430 PF03527 RHS protein YZOS03_14460 PF13247 4Fe-4S dicluster domain YZOS03_14470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YZOS03_14470 PF00384 Molybdopterin oxidoreductase YZOS03_14470 PF01568 Molydopterin dinucleotide binding domain YZOS03_14490 PF02613 Nitrate reductase delta subunit YZOS03_14530 PF02634 FdhD/NarQ family YZOS03_14540 PF12848 ABC transporter YZOS03_14540 PF00005 ABC transporter YZOS03_14550 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_14560 PF00072 Response regulator receiver domain YZOS03_14560 PF00158 Sigma-54 interaction domain YZOS03_14560 PF02954 Bacterial regulatory protein, Fis family YZOS03_14570 PF12849 PBP superfamily domain YZOS03_14580 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_14590 PF00005 ABC transporter YZOS03_14590 PF08402 TOBE domain YZOS03_14600 PF12804 MobA-like NTP transferase domain YZOS03_14610 PF00994 Probable molybdopterin binding domain YZOS03_14610 PF03454 MoeA C-terminal region (domain IV) YZOS03_14610 PF03453 MoeA N-terminal region (domain I and II) YZOS03_14630 PF00480 ROK family YZOS03_14640 PF03942 DTW domain YZOS03_14700 PF00877 NlpC/P60 family YZOS03_14720 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_14720 PF05230 MASE2 domain YZOS03_14730 PF00072 Response regulator receiver domain YZOS03_14730 PF01339 CheB methylesterase YZOS03_14740 PF03881 Fructosamine kinase YZOS03_14750 PF03881 Fructosamine kinase YZOS03_14770 PF00677 Lumazine binding domain YZOS03_14780 PF01554 MatE YZOS03_14800 PF01068 ATP dependent DNA ligase domain YZOS03_14800 PF14743 DNA ligase OB-like domain YZOS03_14810 PF01740 STAS domain YZOS03_14830 PF10531 SLBB domain YZOS03_14830 PF02563 Polysaccharide biosynthesis/export protein YZOS03_14860 PF00072 Response regulator receiver domain YZOS03_14860 PF02954 Bacterial regulatory protein, Fis family YZOS03_14860 PF00158 Sigma-54 interaction domain YZOS03_14870 PF00534 Glycosyl transferases group 1 YZOS03_14870 PF13439 Glycosyltransferase Family 4 YZOS03_14890 PF00534 Glycosyl transferases group 1 YZOS03_14890 PF13439 Glycosyltransferase Family 4 YZOS03_14960 PF00534 Glycosyl transferases group 1 YZOS03_14960 PF13439 Glycosyltransferase Family 4 YZOS03_14980 PF02397 Bacterial sugar transferase YZOS03_15000 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_15030 PF00270 DEAD/DEAH box helicase YZOS03_15030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YZOS03_15030 PF04408 Helicase associated domain (HA2) YZOS03_15030 PF11898 Domain of unknown function (DUF3418) YZOS03_15030 PF00271 Helicase conserved C-terminal domain YZOS03_15040 PF02525 Flavodoxin-like fold YZOS03_15110 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_15130 PF00012 Hsp70 protein YZOS03_15140 PF00012 Hsp70 protein YZOS03_15170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YZOS03_15170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YZOS03_15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_15190 PF03466 LysR substrate binding domain YZOS03_15220 PF07963 Prokaryotic N-terminal methylation motif YZOS03_15220 PF08334 Type II secretion system (T2SS), protein G YZOS03_15230 PF00664 ABC transporter transmembrane region YZOS03_15230 PF00005 ABC transporter YZOS03_15240 PF00005 ABC transporter YZOS03_15240 PF00664 ABC transporter transmembrane region YZOS03_15250 PF00005 ABC transporter YZOS03_15250 PF00664 ABC transporter transmembrane region YZOS03_15270 PF00593 TonB dependent receptor YZOS03_15270 PF07715 TonB-dependent Receptor Plug Domain YZOS03_15280 PF01032 FecCD transport family YZOS03_15290 PF01497 Periplasmic binding protein YZOS03_15300 PF00005 ABC transporter YZOS03_15330 PF03222 Tryptophan/tyrosine permease family YZOS03_15340 PF00465 Iron-containing alcohol dehydrogenase YZOS03_15350 PF01966 HD domain YZOS03_15370 PF03741 Integral membrane protein TerC family YZOS03_15390 PF04055 Radical SAM superfamily YZOS03_15400 PF11230 Protein of unknown function (DUF3029) YZOS03_15410 PF01810 LysE type translocator YZOS03_15420 PF01966 HD domain YZOS03_15420 PF11871 Domain of unknown function (DUF3391) YZOS03_15440 PF03707 Bacterial signalling protein N terminal repeat YZOS03_15440 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_15440 PF00563 EAL domain YZOS03_15450 PF00072 Response regulator receiver domain YZOS03_15450 PF00158 Sigma-54 interaction domain YZOS03_15450 PF02954 Bacterial regulatory protein, Fis family YZOS03_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_15460 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_15470 PF00939 Sodium:sulfate symporter transmembrane region YZOS03_15510 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_15510 PF00072 Response regulator receiver domain YZOS03_15520 PF03928 Haem-degrading YZOS03_15530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YZOS03_15530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YZOS03_15540 PF00455 DeoR C terminal sensor domain YZOS03_15540 PF08220 DeoR-like helix-turn-helix domain YZOS03_15570 PF02321 Outer membrane efflux protein YZOS03_15590 PF03412 Peptidase C39 family YZOS03_15590 PF00664 ABC transporter transmembrane region YZOS03_15590 PF00005 ABC transporter YZOS03_15620 PF00884 Sulfatase YZOS03_15630 PF00884 Sulfatase YZOS03_15660 PF13186 Iron-sulfur cluster-binding domain YZOS03_15660 PF04055 Radical SAM superfamily YZOS03_15670 PF03781 Sulfatase-modifying factor enzyme 1 YZOS03_15680 PF03781 Sulfatase-modifying factor enzyme 1 YZOS03_15700 PF00884 Sulfatase YZOS03_15710 PF00696 Amino acid kinase family YZOS03_15710 PF13840 ACT domain YZOS03_15720 PF06339 Ectoine synthase YZOS03_15730 PF00202 Aminotransferase class-III YZOS03_15740 PF00583 Acetyltransferase (GNAT) family YZOS03_15750 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_15780 PF00571 CBS domain YZOS03_15780 PF00005 ABC transporter YZOS03_15790 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_15800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YZOS03_15810 PF00884 Sulfatase YZOS03_15860 PF01235 Sodium:alanine symporter family YZOS03_15880 PF01810 LysE type translocator YZOS03_15890 PF02074 Carboxypeptidase Taq (M32) metallopeptidase YZOS03_15900 PF03279 Bacterial lipid A biosynthesis acyltransferase YZOS03_15910 PF00893 Small Multidrug Resistance protein YZOS03_15930 PF04204 Homoserine O-succinyltransferase YZOS03_15960 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_15960 PF00563 EAL domain YZOS03_15960 PF03707 Bacterial signalling protein N terminal repeat YZOS03_15970 PF00072 Response regulator receiver domain YZOS03_15970 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_15970 PF00672 HAMP domain YZOS03_15970 PF01627 Hpt domain YZOS03_15970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YZOS03_16020 PF04237 YjbR YZOS03_16030 PF01047 MarR family YZOS03_16050 PF12792 CSS motif domain associated with EAL YZOS03_16050 PF00563 EAL domain YZOS03_16060 PF00202 Aminotransferase class-III YZOS03_16070 PF00171 Aldehyde dehydrogenase family YZOS03_16080 PF04371 Porphyromonas-type peptidyl-arginine deiminase YZOS03_16090 PF00795 Carbon-nitrogen hydrolase YZOS03_16100 PF01266 FAD dependent oxidoreductase YZOS03_16110 PF00171 Aldehyde dehydrogenase family YZOS03_16120 PF07883 Cupin domain YZOS03_16120 PF01381 Helix-turn-helix YZOS03_16130 PF07722 Peptidase C26 YZOS03_16140 PF00120 Glutamine synthetase, catalytic domain YZOS03_16150 PF03553 Na+/H+ antiporter family YZOS03_16180 PF02694 Uncharacterised BCR, YnfA/UPF0060 family YZOS03_16230 PF07007 Lysozyme inhibitor LprI YZOS03_16320 PF00677 Lumazine binding domain YZOS03_16660 PF04466 Phage terminase large subunit YZOS03_16660 PF17288 Terminase RNAseH like domain YZOS03_16760 PF07411 Domain of unknown function (DUF1508) YZOS03_16820 PF00106 short chain dehydrogenase YZOS03_16830 PF12833 Helix-turn-helix domain YZOS03_16920 PF01381 Helix-turn-helix YZOS03_16920 PF00717 Peptidase S24-like YZOS03_17010 PF02798 Glutathione S-transferase, N-terminal domain YZOS03_17010 PF14497 Glutathione S-transferase, C-terminal domain YZOS03_17030 PF04209 homogentisate 1,2-dioxygenase YZOS03_17040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_17050 PF07687 Peptidase dimerisation domain YZOS03_17050 PF01546 Peptidase family M20/M25/M40 YZOS03_17060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_17070 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_17080 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_17080 PF12911 N-terminal TM domain of oligopeptide transport permease C YZOS03_17090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_17090 PF00005 ABC transporter YZOS03_17100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_17100 PF00005 ABC transporter YZOS03_17120 PF01752 Collagenase YZOS03_17120 PF08453 Peptidase family M9 N-terminal YZOS03_17140 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_17150 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_17160 PF00005 ABC transporter YZOS03_17160 PF08402 TOBE domain YZOS03_17170 PF00701 Dihydrodipicolinate synthetase family YZOS03_17180 PF02423 Ornithine cyclodeaminase/mu-crystallin family YZOS03_17200 PF01266 FAD dependent oxidoreductase YZOS03_17200 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YZOS03_17210 PF05544 Proline racemase YZOS03_17220 PF00171 Aldehyde dehydrogenase family YZOS03_17230 PF00392 Bacterial regulatory proteins, gntR family YZOS03_17270 PF05971 RNA methyltransferase YZOS03_17280 PF01863 Protein of unknown function DUF45 YZOS03_17300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_17300 PF03466 LysR substrate binding domain YZOS03_17350 PF00005 ABC transporter YZOS03_17360 PF01032 FecCD transport family YZOS03_17370 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YZOS03_17400 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YZOS03_17410 PF02654 Cobalamin-5-phosphate synthase YZOS03_17420 PF02277 Phosphoribosyltransferase YZOS03_17430 PF02277 Phosphoribosyltransferase YZOS03_17440 PF13460 NAD(P)H-binding YZOS03_17450 PF00375 Sodium:dicarboxylate symporter family YZOS03_17460 PF08411 Exonuclease C-terminal YZOS03_17460 PF00929 Exonuclease YZOS03_17470 PF03788 LrgA family YZOS03_17480 PF04172 LrgB-like family YZOS03_17490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YZOS03_17490 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region YZOS03_17500 PF02222 ATP-grasp domain YZOS03_17510 PF05724 Thiopurine S-methyltransferase (TPMT) YZOS03_17530 PF00216 Bacterial DNA-binding protein YZOS03_17550 PF03483 B3/4 domain YZOS03_17550 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YZOS03_17550 PF01588 Putative tRNA binding domain YZOS03_17550 PF03147 Ferredoxin-fold anticodon binding domain YZOS03_17550 PF03484 tRNA synthetase B5 domain YZOS03_17560 PF01409 tRNA synthetases class II core domain (F) YZOS03_17560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YZOS03_17640 PF01906 Putative heavy-metal-binding YZOS03_17650 PF00453 Ribosomal protein L20 YZOS03_17660 PF01632 Ribosomal protein L35 YZOS03_17670 PF05198 Translation initiation factor IF-3, N-terminal domain YZOS03_17670 PF00707 Translation initiation factor IF-3, C-terminal domain YZOS03_17680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YZOS03_17680 PF03129 Anticodon binding domain YZOS03_17680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YZOS03_17680 PF02824 TGS domain YZOS03_17710 PF07702 UTRA domain YZOS03_17710 PF00392 Bacterial regulatory proteins, gntR family YZOS03_17720 PF01979 Amidohydrolase family YZOS03_17730 PF00491 Arginase family YZOS03_17740 PF01175 Urocanase Rossmann-like domain YZOS03_17740 PF17391 Urocanase N-terminal domain YZOS03_17740 PF17392 Urocanase C-terminal domain YZOS03_17750 PF00221 Aromatic amino acid lyase YZOS03_17770 PF04191 Phospholipid methyltransferase YZOS03_17780 PF13183 4Fe-4S dicluster domain YZOS03_17780 PF01565 FAD binding domain YZOS03_17780 PF02913 FAD linked oxidases, C-terminal domain YZOS03_17810 PF05736 OprF membrane domain YZOS03_17810 PF00691 OmpA family YZOS03_17850 PF01259 SAICAR synthetase YZOS03_17860 PF09423 PhoD-like phosphatase YZOS03_17860 PF16655 PhoD-like phosphatase, N-terminal domain YZOS03_17890 PF11898 Domain of unknown function (DUF3418) YZOS03_17890 PF00270 DEAD/DEAH box helicase YZOS03_17890 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YZOS03_17890 PF00271 Helicase conserved C-terminal domain YZOS03_17890 PF04408 Helicase associated domain (HA2) YZOS03_17900 PF00390 Malic enzyme, N-terminal domain YZOS03_17900 PF03949 Malic enzyme, NAD binding domain YZOS03_17910 PF02698 DUF218 domain YZOS03_17920 PF00939 Sodium:sulfate symporter transmembrane region YZOS03_17930 PF00072 Response regulator receiver domain YZOS03_17930 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_17950 PF00266 Aminotransferase class-V YZOS03_17970 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_17980 PF00664 ABC transporter transmembrane region YZOS03_17980 PF00005 ABC transporter YZOS03_17990 PF00005 ABC transporter YZOS03_17990 PF00664 ABC transporter transmembrane region YZOS03_18000 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_18010 PF00266 Aminotransferase class-V YZOS03_18030 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_18030 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_18060 PF04993 TfoX N-terminal domain YZOS03_18060 PF04994 TfoX C-terminal domain YZOS03_18080 PF03956 Lysine exporter LysO YZOS03_18100 PF00282 Pyridoxal-dependent decarboxylase conserved domain YZOS03_18110 PF01380 SIS domain YZOS03_18110 PF01418 Helix-turn-helix domain, rpiR family YZOS03_18120 PF00465 Iron-containing alcohol dehydrogenase YZOS03_18140 PF00462 Glutaredoxin YZOS03_18150 PF06826 Predicted Permease Membrane Region YZOS03_18150 PF02080 TrkA-C domain YZOS03_18160 PF07055 Enoyl reductase FAD binding domain YZOS03_18160 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YZOS03_18160 PF12241 Trans-2-enoyl-CoA reductase catalytic region YZOS03_18170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_18170 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_18170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_18170 PF09317 Domain of unknown function (DUF1974) YZOS03_18180 PF16295 Tetracyclin repressor-like, C-terminal domain YZOS03_18180 PF00440 Bacterial regulatory proteins, tetR family YZOS03_18190 PF06965 Na+/H+ antiporter 1 YZOS03_18220 PF00005 ABC transporter YZOS03_18230 PF01554 MatE YZOS03_18240 PF13460 NAD(P)H-binding YZOS03_18240 PF11066 Protein of unknown function (DUF2867) YZOS03_18260 PF07690 Major Facilitator Superfamily YZOS03_18280 PF01479 S4 domain YZOS03_18280 PF00849 RNA pseudouridylate synthase YZOS03_18290 PF04851 Type III restriction enzyme, res subunit YZOS03_18290 PF00271 Helicase conserved C-terminal domain YZOS03_18310 PF00486 Transcriptional regulatory protein, C terminal YZOS03_18310 PF00072 Response regulator receiver domain YZOS03_18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_18330 PF01386 Ribosomal L25p family YZOS03_18350 PF02872 5'-nucleotidase, C-terminal domain YZOS03_18350 PF00149 Calcineurin-like phosphoesterase YZOS03_18380 PF13416 Bacterial extracellular solute-binding protein YZOS03_18390 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_18400 PF00005 ABC transporter YZOS03_18410 PF01066 CDP-alcohol phosphatidyltransferase YZOS03_18430 PF01590 GAF domain YZOS03_18430 PF00158 Sigma-54 interaction domain YZOS03_18440 PF03063 Prismane/CO dehydrogenase family YZOS03_18450 PF00175 Oxidoreductase NAD-binding domain YZOS03_18450 PF00111 2Fe-2S iron-sulfur cluster binding domain YZOS03_18450 PF00970 Oxidoreductase FAD-binding domain YZOS03_18470 PF00849 RNA pseudouridylate synthase YZOS03_18480 PF00209 Sodium:neurotransmitter symporter family YZOS03_18490 PF13091 PLD-like domain YZOS03_18490 PF13396 Phospholipase_D-nuclease N-terminal YZOS03_18500 PF01053 Cys/Met metabolism PLP-dependent enzyme YZOS03_18510 PF00561 alpha/beta hydrolase fold YZOS03_18520 PF03280 Proteobacterial lipase chaperone protein YZOS03_18530 PF03352 Methyladenine glycosylase YZOS03_18540 PF00873 AcrB/AcrD/AcrF family YZOS03_18550 PF00873 AcrB/AcrD/AcrF family YZOS03_18560 PF13533 Biotin-lipoyl like YZOS03_18580 PF04024 PspC domain YZOS03_18590 PF06667 Phage shock protein B YZOS03_18600 PF04012 PspA/IM30 family YZOS03_18610 PF00158 Sigma-54 interaction domain YZOS03_18610 PF02954 Bacterial regulatory protein, Fis family YZOS03_18620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_18630 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_18640 PF12911 N-terminal TM domain of oligopeptide transport permease C YZOS03_18640 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_18650 PF00005 ABC transporter YZOS03_18650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_18660 PF00005 ABC transporter YZOS03_18680 PF01368 DHH family YZOS03_18680 PF02833 DHHA2 domain YZOS03_18700 PF16875 Glycosyl hydrolase family 36 N-terminal domain YZOS03_18700 PF16874 Glycosyl hydrolase family 36 C-terminal domain YZOS03_18710 PF00384 Molybdopterin oxidoreductase YZOS03_18710 PF01568 Molydopterin dinucleotide binding domain YZOS03_18710 PF18364 Molybdopterin oxidoreductase N-terminal domain YZOS03_18720 PF03264 NapC/NirT cytochrome c family, N-terminal region YZOS03_18730 PF06796 Periplasmic nitrate reductase protein NapE YZOS03_18740 PF03649 Uncharacterised protein family (UPF0014) YZOS03_18760 PF01226 Formate/nitrite transporter YZOS03_18810 PF02698 DUF218 domain YZOS03_18820 PF00265 Thymidine kinase YZOS03_18830 PF01406 tRNA synthetases class I (C) catalytic domain YZOS03_18830 PF09190 DALR domain YZOS03_18840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YZOS03_18850 PF00149 Calcineurin-like phosphoesterase YZOS03_18860 PF00563 EAL domain YZOS03_18860 PF08668 HDOD domain YZOS03_18870 PF02810 SEC-C motif YZOS03_18880 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YZOS03_18880 PF01502 Phosphoribosyl-AMP cyclohydrolase YZOS03_18890 PF00977 Histidine biosynthesis protein YZOS03_18900 PF00977 Histidine biosynthesis protein YZOS03_18910 PF00117 Glutamine amidotransferase class-I YZOS03_18920 PF08645 Polynucleotide kinase 3 phosphatase YZOS03_18920 PF00475 Imidazoleglycerol-phosphate dehydratase YZOS03_18930 PF00155 Aminotransferase class I and II YZOS03_18940 PF00815 Histidinol dehydrogenase YZOS03_18950 PF01634 ATP phosphoribosyltransferase YZOS03_18950 PF08029 HisG, C-terminal domain YZOS03_18960 PF03553 Na+/H+ antiporter family YZOS03_18970 PF00816 H-NS histone family YZOS03_18980 PF00294 pfkB family carbohydrate kinase YZOS03_19010 PF04356 Protein of unknown function (DUF489) YZOS03_19020 PF08328 Adenylosuccinate lyase C-terminal YZOS03_19020 PF00206 Lyase YZOS03_19040 PF16036 Chalcone isomerase-like YZOS03_19090 PF00106 short chain dehydrogenase YZOS03_19110 PF01435 Peptidase family M48 YZOS03_19140 PF08241 Methyltransferase domain YZOS03_19150 PF00155 Aminotransferase class I and II YZOS03_19160 PF06968 Biotin and Thiamin Synthesis associated domain YZOS03_19160 PF04055 Radical SAM superfamily YZOS03_19170 PF00202 Aminotransferase class-III YZOS03_19180 PF01258 Prokaryotic dksA/traR C4-type zinc finger YZOS03_19190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YZOS03_19190 PF02403 Seryl-tRNA synthetase N-terminal domain YZOS03_19200 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_19200 PF16193 AAA C-terminal domain YZOS03_19200 PF12002 MgsA AAA+ ATPase C terminal YZOS03_19210 PF03548 Outer membrane lipoprotein carrier protein LolA YZOS03_19220 PF17854 FtsK alpha domain YZOS03_19220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YZOS03_19220 PF01580 FtsK/SpoIIIE family YZOS03_19220 PF09397 Ftsk gamma domain YZOS03_19230 PF01037 Lrp/AsnC ligand binding domain YZOS03_19240 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YZOS03_19240 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YZOS03_19260 PF03466 LysR substrate binding domain YZOS03_19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_19280 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) YZOS03_19290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_19290 PF00672 HAMP domain YZOS03_19310 PF03372 Endonuclease/Exonuclease/phosphatase family YZOS03_19330 PF00579 tRNA synthetases class I (W and Y) YZOS03_19360 PF00873 AcrB/AcrD/AcrF family YZOS03_19370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_19370 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_19380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_19380 PF17200 Single Cache domain 2 YZOS03_19380 PF00672 HAMP domain YZOS03_19410 PF01654 Cytochrome bd terminal oxidase subunit I YZOS03_19420 PF02322 Cytochrome bd terminal oxidase subunit II YZOS03_19430 PF06610 L-alanine exporter YZOS03_19440 PF00072 Response regulator receiver domain YZOS03_19440 PF09308 LuxQ, periplasmic YZOS03_19440 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_19440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_19460 PF03738 Glutathionylspermidine synthase preATP-grasp YZOS03_19480 PF03994 Domain of Unknown Function (DUF350) YZOS03_19500 PF02445 Quinolinate synthetase A protein YZOS03_19510 PF16331 TolA binding protein trimerisation YZOS03_19510 PF13174 Tetratricopeptide repeat YZOS03_19520 PF00691 OmpA family YZOS03_19530 PF07676 WD40-like Beta Propeller Repeat YZOS03_19530 PF04052 TolB amino-terminal domain YZOS03_19550 PF02472 Biopolymer transport protein ExbD/TolR YZOS03_19560 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_19570 PF03061 Thioesterase superfamily YZOS03_19590 PF02322 Cytochrome bd terminal oxidase subunit II YZOS03_19600 PF01654 Cytochrome bd terminal oxidase subunit I YZOS03_19610 PF05496 Holliday junction DNA helicase RuvB P-loop domain YZOS03_19610 PF05491 RuvB C-terminal winged helix domain YZOS03_19610 PF17864 RuvB AAA lid domain YZOS03_19620 PF07499 RuvA, C-terminal domain YZOS03_19620 PF01330 RuvA N terminal domain YZOS03_19630 PF02075 Crossover junction endodeoxyribonuclease RuvC YZOS03_19640 PF01709 Transcriptional regulator YZOS03_19650 PF02938 GAD domain YZOS03_19650 PF00152 tRNA synthetases class II (D, K and N) YZOS03_19650 PF01336 OB-fold nucleic acid binding domain YZOS03_19670 PF01904 Protein of unknown function DUF72 YZOS03_19680 PF13649 Methyltransferase domain YZOS03_19690 PF08003 Protein of unknown function (DUF1698) YZOS03_19700 PF18030 RimK PreATP-grasp domain YZOS03_19700 PF08443 RimK-like ATP-grasp domain YZOS03_19740 PF16330 MukB hinge domain YZOS03_19740 PF04310 MukB N-terminal YZOS03_19750 PF04288 MukE-like family YZOS03_19760 PF03882 MukF winged-helix domain YZOS03_19760 PF17192 MukF middle domain YZOS03_19760 PF17193 MukF C-terminal domain YZOS03_19770 PF13847 Methyltransferase domain YZOS03_19780 PF02698 DUF218 domain YZOS03_19790 PF00486 Transcriptional regulatory protein, C terminal YZOS03_19790 PF00072 Response regulator receiver domain YZOS03_19800 PF02613 Nitrate reductase delta subunit YZOS03_19810 PF00356 Bacterial regulatory proteins, lacI family YZOS03_19820 PF04993 TfoX N-terminal domain YZOS03_19820 PF04994 TfoX C-terminal domain YZOS03_19860 PF08323 Starch synthase catalytic domain YZOS03_19860 PF00534 Glycosyl transferases group 1 YZOS03_19870 PF00483 Nucleotidyl transferase YZOS03_19880 PF08272 Topoisomerase I zinc-ribbon-like YZOS03_19880 PF01131 DNA topoisomerase YZOS03_19880 PF01751 Toprim domain YZOS03_19880 PF01396 Topoisomerase DNA binding C4 zinc finger YZOS03_19890 PF10692 Protein of unknown function (DUF2498) YZOS03_19900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YZOS03_19920 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YZOS03_19930 PF04376 Arginine-tRNA-protein transferase, N terminus YZOS03_19930 PF04377 Arginine-tRNA-protein transferase, C terminus YZOS03_19940 PF01176 Translation initiation factor 1A / IF-1 YZOS03_19950 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_19950 PF07724 AAA domain (Cdc48 subfamily) YZOS03_19950 PF17871 AAA lid domain YZOS03_19950 PF02861 Clp amino terminal domain, pathogenicity island component YZOS03_19950 PF10431 C-terminal, D2-small domain, of ClpB protein YZOS03_19960 PF02617 ATP-dependent Clp protease adaptor protein ClpS YZOS03_19980 PF00313 'Cold-shock' DNA-binding domain YZOS03_19990 PF03971 Monomeric isocitrate dehydrogenase YZOS03_20000 PF00849 RNA pseudouridylate synthase YZOS03_20010 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) YZOS03_20030 PF13307 Helicase C-terminal domain YZOS03_20030 PF06733 DEAD_2 YZOS03_20040 PF01925 Sulfite exporter TauE/SafE YZOS03_20050 PF07445 Primosomal replication protein priC YZOS03_20060 PF10689 Protein of unknown function (DUF2496) YZOS03_20070 PF03372 Endonuclease/Exonuclease/phosphatase family YZOS03_20090 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_20100 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_20110 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_20120 PF00005 ABC transporter YZOS03_20150 PF01228 Glycine radical YZOS03_20150 PF02901 Pyruvate formate lyase-like YZOS03_20170 PF04055 Radical SAM superfamily YZOS03_20190 PF03887 YfbU domain YZOS03_20200 PF08298 PrkA AAA domain YZOS03_20200 PF06798 PrkA serine protein kinase C-terminal domain YZOS03_20210 PF04285 Protein of unknown function (DUF444) YZOS03_20220 PF04293 SpoVR like protein YZOS03_20230 PF02348 Cytidylyltransferase YZOS03_20240 PF03966 Trm112p-like protein YZOS03_20250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YZOS03_20260 PF00664 ABC transporter transmembrane region YZOS03_20260 PF00005 ABC transporter YZOS03_20270 PF00753 Metallo-beta-lactamase superfamily YZOS03_20270 PF13567 Domain of unknown function (DUF4131) YZOS03_20270 PF03772 Competence protein YZOS03_20280 PF12704 MacB-like periplasmic core domain YZOS03_20280 PF02687 FtsX-like permease family YZOS03_20290 PF00005 ABC transporter YZOS03_20300 PF02687 FtsX-like permease family YZOS03_20300 PF12704 MacB-like periplasmic core domain YZOS03_20320 PF03461 TRCF domain YZOS03_20320 PF00271 Helicase conserved C-terminal domain YZOS03_20320 PF00270 DEAD/DEAH box helicase YZOS03_20320 PF02559 CarD-like/TRCF domain YZOS03_20320 PF17757 UvrB interaction domain YZOS03_20350 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_20360 PF05728 Uncharacterised protein family (UPF0227) YZOS03_20370 PF01636 Phosphotransferase enzyme family YZOS03_20380 PF13036 Peptidoglycan-synthase activator LpoB YZOS03_20380 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YZOS03_20410 PF01230 HIT domain YZOS03_20420 PF00672 HAMP domain YZOS03_20420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_20440 PF01048 Phosphorylase superfamily YZOS03_20450 PF00403 Heavy-metal-associated domain YZOS03_20460 PF00571 CBS domain YZOS03_20460 PF00478 IMP dehydrogenase / GMP reductase domain YZOS03_20470 PF08032 RNA 2'-O ribose methyltransferase substrate binding YZOS03_20470 PF00588 SpoU rRNA Methylase family YZOS03_20480 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_20500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YZOS03_20510 PF09619 Type III secretion system lipoprotein chaperone (YscW) YZOS03_20540 PF01037 Lrp/AsnC ligand binding domain YZOS03_20540 PF13404 AsnC-type helix-turn-helix domain YZOS03_20550 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_20580 PF00873 AcrB/AcrD/AcrF family YZOS03_20590 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_20590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_20620 PF07690 Major Facilitator Superfamily YZOS03_20630 PF03601 Conserved hypothetical protein 698 YZOS03_20650 PF00501 AMP-binding enzyme YZOS03_20650 PF13193 AMP-binding enzyme C-terminal domain YZOS03_20660 PF13378 Enolase C-terminal domain-like YZOS03_20670 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_20680 PF12697 Alpha/beta hydrolase family YZOS03_20690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YZOS03_20690 PF16582 Middle domain of thiamine pyrophosphate YZOS03_20690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YZOS03_20700 PF00425 chorismate binding enzyme YZOS03_20720 PF00155 Aminotransferase class I and II YZOS03_20750 PF13286 Phosphohydrolase-associated domain YZOS03_20750 PF01966 HD domain YZOS03_20790 PF13145 PPIC-type PPIASE domain YZOS03_20800 PF00216 Bacterial DNA-binding protein YZOS03_20810 PF05362 Lon protease (S16) C-terminal proteolytic domain YZOS03_20810 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_20810 PF02190 ATP-dependent protease La (LON) substrate-binding domain YZOS03_20820 PF10431 C-terminal, D2-small domain, of ClpB protein YZOS03_20820 PF07724 AAA domain (Cdc48 subfamily) YZOS03_20820 PF06689 ClpX C4-type zinc finger YZOS03_20830 PF00574 Clp protease YZOS03_20840 PF05697 Bacterial trigger factor protein (TF) YZOS03_20840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YZOS03_20840 PF05698 Bacterial trigger factor protein (TF) C-terminus YZOS03_20850 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_20850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_20850 PF02743 Cache domain YZOS03_20860 PF02954 Bacterial regulatory protein, Fis family YZOS03_20860 PF00158 Sigma-54 interaction domain YZOS03_20860 PF00072 Response regulator receiver domain YZOS03_20880 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YZOS03_20890 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component YZOS03_20900 PF03480 Bacterial extracellular solute-binding protein, family 7 YZOS03_20910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family YZOS03_20940 PF02386 Cation transport protein YZOS03_20950 PF02254 TrkA-N domain YZOS03_20950 PF02080 TrkA-C domain YZOS03_20960 PF00270 DEAD/DEAH box helicase YZOS03_20960 PF00271 Helicase conserved C-terminal domain YZOS03_20980 PF04820 Tryptophan halogenase YZOS03_21030 PF00550 Phosphopantetheine attachment site YZOS03_21040 PF00550 Phosphopantetheine attachment site YZOS03_21070 PF07977 FabA-like domain YZOS03_21080 PF00535 Glycosyl transferase family 2 YZOS03_21090 PF00221 Aromatic amino acid lyase YZOS03_21140 PF00109 Beta-ketoacyl synthase, N-terminal domain YZOS03_21140 PF02801 Beta-ketoacyl synthase, C-terminal domain YZOS03_21150 PF07977 FabA-like domain YZOS03_21170 PF00109 Beta-ketoacyl synthase, N-terminal domain YZOS03_21170 PF02801 Beta-ketoacyl synthase, C-terminal domain YZOS03_21180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YZOS03_21180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YZOS03_21190 PF07662 Na+ dependent nucleoside transporter C-terminus YZOS03_21190 PF01773 Na+ dependent nucleoside transporter N-terminus YZOS03_21190 PF07670 Nucleoside recognition YZOS03_21200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_21200 PF03466 LysR substrate binding domain YZOS03_21210 PF13406 Transglycosylase SLT domain YZOS03_21220 PF05166 YcgL domain YZOS03_21230 PF03775 Septum formation inhibitor MinC, C-terminal domain YZOS03_21230 PF05209 Septum formation inhibitor MinC, N-terminal domain YZOS03_21240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YZOS03_21250 PF03776 Septum formation topological specificity factor MinE YZOS03_21260 PF01612 3'-5' exonuclease YZOS03_21260 PF00570 HRDC domain YZOS03_21270 PF00501 AMP-binding enzyme YZOS03_21270 PF13193 AMP-binding enzyme C-terminal domain YZOS03_21280 PF00561 alpha/beta hydrolase fold YZOS03_21290 PF03843 Outer membrane lipoprotein Slp family YZOS03_21310 PF00814 Glycoprotease family YZOS03_21320 PF04851 Type III restriction enzyme, res subunit YZOS03_21320 PF13307 Helicase C-terminal domain YZOS03_21340 PF01842 ACT domain YZOS03_21340 PF00551 Formyl transferase YZOS03_21350 PF00089 Trypsin YZOS03_21370 PF06185 YecM protein YZOS03_21380 PF03485 Arginyl tRNA synthetase N terminal domain YZOS03_21380 PF05746 DALR anticodon binding domain YZOS03_21380 PF00750 tRNA synthetases class I (R) YZOS03_21430 PF07664 Ferrous iron transport protein B C terminus YZOS03_21430 PF17910 FeoB cytosolic helical domain YZOS03_21430 PF02421 Ferrous iron transport protein B YZOS03_21430 PF07670 Nucleoside recognition YZOS03_21440 PF04023 FeoA domain YZOS03_21450 PF02311 AraC-like ligand binding domain YZOS03_21450 PF12833 Helix-turn-helix domain YZOS03_21470 PF01297 Zinc-uptake complex component A periplasmic YZOS03_21480 PF00005 ABC transporter YZOS03_21490 PF00950 ABC 3 transport family YZOS03_21500 PF02629 CoA binding domain YZOS03_21500 PF00549 CoA-ligase YZOS03_21510 PF08442 ATP-grasp domain YZOS03_21510 PF00549 CoA-ligase YZOS03_21520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YZOS03_21520 PF00364 Biotin-requiring enzyme YZOS03_21520 PF02817 e3 binding domain YZOS03_21530 PF02779 Transketolase, pyrimidine binding domain YZOS03_21530 PF16870 2-oxoglutarate dehydrogenase C-terminal YZOS03_21530 PF00676 Dehydrogenase E1 component YZOS03_21530 PF16078 2-oxoglutarate dehydrogenase N-terminus YZOS03_21540 PF13085 2Fe-2S iron-sulfur cluster binding domain YZOS03_21550 PF00890 FAD binding domain YZOS03_21550 PF02910 Fumarate reductase flavoprotein C-term YZOS03_21560 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YZOS03_21570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YZOS03_21580 PF00285 Citrate synthase, C-terminal domain YZOS03_21590 PF01784 NIF3 (NGG1p interacting factor 3) YZOS03_21610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YZOS03_21610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YZOS03_21610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YZOS03_21610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YZOS03_21620 PF03925 SeqA protein C-terminal domain YZOS03_21620 PF17206 SeqA protein N-terminal domain YZOS03_21630 PF12697 Alpha/beta hydrolase family YZOS03_21650 PF00258 Flavodoxin YZOS03_21670 PF01475 Ferric uptake regulator family YZOS03_21680 PF00749 tRNA synthetases class I (E and Q), catalytic domain YZOS03_21680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YZOS03_21690 PF02378 Phosphotransferase system, EIIC YZOS03_21690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YZOS03_21690 PF00367 phosphotransferase system, EIIB YZOS03_21700 PF01979 Amidohydrolase family YZOS03_21710 PF01047 MarR family YZOS03_21710 PF00480 ROK family YZOS03_21720 PF00999 Sodium/hydrogen exchanger family YZOS03_21720 PF02254 TrkA-N domain YZOS03_21730 PF00733 Asparagine synthase YZOS03_21730 PF13537 Glutamine amidotransferase domain YZOS03_21740 PF02357 Transcription termination factor nusG YZOS03_21750 PF00854 POT family YZOS03_21760 PF00762 Ferrochelatase YZOS03_21770 PF05191 Adenylate kinase, active site lid YZOS03_21780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_21780 PF00183 Hsp90 protein YZOS03_21790 PF00486 Transcriptional regulatory protein, C terminal YZOS03_21800 PF17323 Trans-membrane regulatory protein ToxS YZOS03_21830 PF12850 Calcineurin-like phosphoesterase superfamily domain YZOS03_21860 PF07556 Protein of unknown function (DUF1538) YZOS03_21870 PF07556 Protein of unknown function (DUF1538) YZOS03_21880 PF08338 Domain of unknown function (DUF1731) YZOS03_21880 PF01370 NAD dependent epimerase/dehydratase family YZOS03_21890 PF00106 short chain dehydrogenase YZOS03_21900 PF00085 Thioredoxin YZOS03_21910 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) YZOS03_21920 PF01270 Glycosyl hydrolases family 8 YZOS03_21930 PF03170 Bacterial cellulose synthase subunit YZOS03_21940 PF03552 Cellulose synthase YZOS03_21940 PF00535 Glycosyl transferase family 2 YZOS03_21940 PF07238 PilZ domain YZOS03_21950 PF06564 Cellulose biosynthesis protein BcsQ YZOS03_21970 PF10995 Cellulose biosynthesis GIL YZOS03_21990 PF11658 Cellulose biosynthesis protein BcsG YZOS03_22000 PF01145 SPFH domain / Band 7 family YZOS03_22000 PF16200 C-terminal region of band_7 YZOS03_22040 PF03573 outer membrane porin, OprD family YZOS03_22050 PF12826 Helix-hairpin-helix motif YZOS03_22050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YZOS03_22050 PF00533 BRCA1 C Terminus (BRCT) domain YZOS03_22050 PF01653 NAD-dependent DNA ligase adenylation domain YZOS03_22050 PF03120 NAD-dependent DNA ligase OB-fold domain YZOS03_22060 PF04354 ZipA, C-terminal FtsZ-binding domain YZOS03_22080 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_22090 PF00381 PTS HPr component phosphorylation site YZOS03_22100 PF02896 PEP-utilising enzyme, TIM barrel domain YZOS03_22100 PF00391 PEP-utilising enzyme, mobile domain YZOS03_22100 PF05524 PEP-utilising enzyme, N-terminal YZOS03_22110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YZOS03_22120 PF00700 Bacterial flagellin C-terminal helical region YZOS03_22120 PF07196 Flagellin hook IN motif YZOS03_22120 PF00669 Bacterial flagellin N-terminal helical region YZOS03_22130 PF00669 Bacterial flagellin N-terminal helical region YZOS03_22130 PF00700 Bacterial flagellin C-terminal helical region YZOS03_22130 PF07196 Flagellin hook IN motif YZOS03_22140 PF00700 Bacterial flagellin C-terminal helical region YZOS03_22140 PF07196 Flagellin hook IN motif YZOS03_22140 PF00669 Bacterial flagellin N-terminal helical region YZOS03_22150 PF00669 Bacterial flagellin N-terminal helical region YZOS03_22160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_22160 PF07196 Flagellin hook IN motif YZOS03_22170 PF10135 Rod binding protein YZOS03_22170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YZOS03_22180 PF02119 Flagellar P-ring protein YZOS03_22190 PF02107 Flagellar L-ring protein YZOS03_22200 PF00460 Flagella basal body rod protein YZOS03_22200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_22210 PF00460 Flagella basal body rod protein YZOS03_22210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_22220 PF00460 Flagella basal body rod protein YZOS03_22220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_22220 PF07559 Flagellar basal body protein FlaE YZOS03_22230 PF03963 Flagellar hook capping protein - N-terminal region YZOS03_22230 PF13860 FlgD Ig-like domain YZOS03_22230 PF13861 FlgD Tudor-like domain YZOS03_22240 PF00460 Flagella basal body rod protein YZOS03_22240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_22250 PF00460 Flagella basal body rod protein YZOS03_22260 PF01739 CheR methyltransferase, SAM binding domain YZOS03_22260 PF03705 CheR methyltransferase, all-alpha domain YZOS03_22270 PF01584 CheW-like domain YZOS03_22270 PF00072 Response regulator receiver domain YZOS03_22360 PF01389 OmpA-like transmembrane domain YZOS03_22360 PF00691 OmpA family YZOS03_22370 PF00749 tRNA synthetases class I (E and Q), catalytic domain YZOS03_22380 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) YZOS03_22390 PF13609 Gram-negative porin YZOS03_22400 PF00403 Heavy-metal-associated domain YZOS03_22430 PF00728 Glycosyl hydrolase family 20, catalytic domain YZOS03_22430 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain YZOS03_22430 PF02838 Glycosyl hydrolase family 20, domain 2 YZOS03_22430 PF03173 Putative carbohydrate binding domain YZOS03_22460 PF01713 Smr domain YZOS03_22470 PF00849 RNA pseudouridylate synthase YZOS03_22470 PF01479 S4 domain YZOS03_22480 PF04073 Aminoacyl-tRNA editing domain YZOS03_22490 PF02872 5'-nucleotidase, C-terminal domain YZOS03_22490 PF00149 Calcineurin-like phosphoesterase YZOS03_22500 PF02872 5'-nucleotidase, C-terminal domain YZOS03_22500 PF00149 Calcineurin-like phosphoesterase YZOS03_22510 PF00793 DAHP synthetase I family YZOS03_22520 PF13369 Transglutaminase-like superfamily YZOS03_22530 PF04247 Invasion gene expression up-regulator, SirB YZOS03_22540 PF13847 Methyltransferase domain YZOS03_22540 PF17827 PrmC N-terminal domain YZOS03_22550 PF00472 RF-1 domain YZOS03_22550 PF03462 PCRF domain YZOS03_22560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YZOS03_22560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YZOS03_22560 PF01488 Shikimate / quinate 5-dehydrogenase YZOS03_22570 PF03550 Outer membrane lipoprotein LolB YZOS03_22580 PF08544 GHMP kinases C terminal YZOS03_22580 PF00288 GHMP kinases N terminal domain YZOS03_22590 PF14572 Phosphoribosyl synthetase-associated domain YZOS03_22590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YZOS03_22600 PF01195 Peptidyl-tRNA hydrolase YZOS03_22610 PF01926 50S ribosome-binding GTPase YZOS03_22610 PF06071 Protein of unknown function (DUF933) YZOS03_22620 PF01494 FAD binding domain YZOS03_22630 PF01938 TRAM domain YZOS03_22630 PF04055 Radical SAM superfamily YZOS03_22630 PF00919 Uncharacterized protein family UPF0004 YZOS03_22640 PF02562 PhoH-like protein YZOS03_22650 PF02130 Uncharacterized protein family UPF0054 YZOS03_22660 PF00571 CBS domain YZOS03_22660 PF03471 Transporter associated domain YZOS03_22670 PF00795 Carbon-nitrogen hydrolase YZOS03_22680 PF07295 Zinc-ribbon containing domain YZOS03_22690 PF08264 Anticodon-binding domain of tRNA YZOS03_22690 PF00133 tRNA synthetases class I (I, L, M and V) YZOS03_22690 PF13603 Leucyl-tRNA synthetase, Domain 2 YZOS03_22700 PF04390 Lipopolysaccharide-assembly YZOS03_22710 PF14840 Processivity clamp loader gamma complex DNA pol III C-term YZOS03_22710 PF06144 DNA polymerase III, delta subunit YZOS03_22730 PF02590 Predicted SPOUT methyltransferase YZOS03_22740 PF03717 Penicillin-binding Protein dimerisation domain YZOS03_22740 PF00905 Penicillin binding protein transpeptidase domain YZOS03_22750 PF01098 Cell cycle protein YZOS03_22760 PF03330 Lytic transglycolase YZOS03_22760 PF05036 Sporulation related domain YZOS03_22770 PF07943 Penicillin-binding protein 5, C-terminal domain YZOS03_22770 PF00768 D-alanyl-D-alanine carboxypeptidase YZOS03_22780 PF04359 Protein of unknown function (DUF493) YZOS03_22790 PF03099 Biotin/lipoate A/B protein ligase family YZOS03_22800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YZOS03_22800 PF04055 Radical SAM superfamily YZOS03_22810 PF00464 Serine hydroxymethyltransferase YZOS03_22820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 YZOS03_22820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) YZOS03_22850 PF16657 Maltogenic Amylase, C-terminal domain YZOS03_22850 PF00128 Alpha amylase, catalytic domain YZOS03_22860 PF00367 phosphotransferase system, EIIB YZOS03_22860 PF02378 Phosphotransferase system, EIIC YZOS03_22870 PF00356 Bacterial regulatory proteins, lacI family YZOS03_22890 PF09383 NIL domain YZOS03_22890 PF00005 ABC transporter YZOS03_22900 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_22910 PF03180 NLPA lipoprotein YZOS03_22920 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) YZOS03_22930 PF07348 Syd protein (SUKH-2) YZOS03_22940 PF14489 QueF-like protein YZOS03_22940 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YZOS03_22960 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_22970 PF11892 Domain of unknown function (DUF3412) YZOS03_22970 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases YZOS03_22970 PF03641 Possible lysine decarboxylase YZOS03_22980 PF01367 5'-3' exonuclease, C-terminal SAM fold YZOS03_22980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YZOS03_22990 PF01728 FtsJ-like methyltransferase YZOS03_22990 PF18125 RlmM ferredoxin-like domain YZOS03_23000 PF04241 Protein of unknown function (DUF423) YZOS03_23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_23020 PF03466 LysR substrate binding domain YZOS03_23030 PF02926 THUMP domain YZOS03_23030 PF02568 Thiamine biosynthesis protein (ThiI) YZOS03_23040 PF13677 Membrane MotB of proton-channel complex MotA/MotB YZOS03_23040 PF00691 OmpA family YZOS03_23050 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_23060 PF02609 Exonuclease VII small subunit YZOS03_23070 PF00348 Polyprenyl synthetase YZOS03_23080 PF02780 Transketolase, C-terminal domain YZOS03_23080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YZOS03_23080 PF02779 Transketolase, pyrimidine binding domain YZOS03_23090 PF04608 Phosphatidylglycerophosphatase A YZOS03_23100 PF00586 AIR synthase related protein, N-terminal domain YZOS03_23100 PF02769 AIR synthase related protein, C-terminal domain YZOS03_23110 PF01029 NusB family YZOS03_23120 PF00885 6,7-dimethyl-8-ribityllumazine synthase YZOS03_23130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YZOS03_23130 PF00925 GTP cyclohydrolase II YZOS03_23140 PF00925 GTP cyclohydrolase II YZOS03_23140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YZOS03_23150 PF00677 Lumazine binding domain YZOS03_23160 PF01872 RibD C-terminal domain YZOS03_23160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YZOS03_23170 PF03477 ATP cone domain YZOS03_23180 PF00171 Aldehyde dehydrogenase family YZOS03_23190 PF00696 Amino acid kinase family YZOS03_23190 PF01472 PUA domain YZOS03_23200 PF07417 Sigma factor-binding transcriptional regulator Crl YZOS03_23210 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) YZOS03_23220 PF00156 Phosphoribosyl transferase domain YZOS03_23230 PF00860 Permease family YZOS03_23240 PF07687 Peptidase dimerisation domain YZOS03_23240 PF01546 Peptidase family M20/M25/M40 YZOS03_23270 PF07715 TonB-dependent Receptor Plug Domain YZOS03_23270 PF00593 TonB dependent receptor YZOS03_23290 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal YZOS03_23290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YZOS03_23290 PF02769 AIR synthase related protein, C-terminal domain YZOS03_23300 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_23300 PF01464 Transglycosylase SLT domain YZOS03_23320 PF14437 MafB19-like deaminase YZOS03_23330 PF03806 AbgT putative transporter family YZOS03_23390 PF00226 DnaJ domain YZOS03_23390 PF01556 DnaJ C terminal domain YZOS03_23390 PF00684 DnaJ central domain YZOS03_23400 PF00012 Hsp70 protein YZOS03_23410 PF00375 Sodium:dicarboxylate symporter family YZOS03_23420 PF01025 GrpE YZOS03_23430 PF01513 ATP-NAD kinase YZOS03_23450 PF02463 RecF/RecN/SMC N terminal domain YZOS03_23470 PF04355 SmpA / OmlA family YZOS03_23480 PF03658 RnfH family Ubiquitin YZOS03_23490 PF03364 Polyketide cyclase / dehydrase and lipid transport YZOS03_23500 PF01668 SmpB protein YZOS03_23510 PF13356 Arm DNA-binding domain YZOS03_23510 PF00589 Phage integrase family YZOS03_23520 PF13356 Arm DNA-binding domain YZOS03_23520 PF00589 Phage integrase family YZOS03_23540 PF01555 DNA methylase YZOS03_23550 PF01555 DNA methylase YZOS03_23570 PF00271 Helicase conserved C-terminal domain YZOS03_23570 PF00176 SNF2 family N-terminal domain YZOS03_23600 PF00075 RNase H YZOS03_23610 PF04002 RadC-like JAB domain YZOS03_23740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_23740 PF03466 LysR substrate binding domain YZOS03_23750 PF00583 Acetyltransferase (GNAT) family YZOS03_23750 PF00795 Carbon-nitrogen hydrolase YZOS03_23790 PF00202 Aminotransferase class-III YZOS03_23800 PF01053 Cys/Met metabolism PLP-dependent enzyme YZOS03_23820 PF01266 FAD dependent oxidoreductase YZOS03_23830 PF01235 Sodium:alanine symporter family YZOS03_23840 PF01184 GPR1/FUN34/yaaH family YZOS03_23850 PF06483 Chitinase C YZOS03_23850 PF00704 Glycosyl hydrolases family 18 YZOS03_23860 PF03553 Na+/H+ antiporter family YZOS03_23870 PF00958 GMP synthase C terminal domain YZOS03_23870 PF00117 Glutamine amidotransferase class-I YZOS03_23870 PF02540 NAD synthase YZOS03_23880 PF00571 CBS domain YZOS03_23880 PF00478 IMP dehydrogenase / GMP reductase domain YZOS03_23890 PF02601 Exonuclease VII, large subunit YZOS03_23890 PF13742 OB-fold nucleic acid binding domain YZOS03_23920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YZOS03_23920 PF01926 50S ribosome-binding GTPase YZOS03_23930 PF13360 PQQ-like domain YZOS03_23940 PF09976 Tetratricopeptide repeat-like domain YZOS03_23950 PF03129 Anticodon binding domain YZOS03_23950 PF13393 Histidyl-tRNA synthetase YZOS03_23960 PF04551 GcpE protein YZOS03_23970 PF13464 Domain of unknown function (DUF4115) YZOS03_23980 PF04055 Radical SAM superfamily YZOS03_23990 PF00334 Nucleoside diphosphate kinase YZOS03_24000 PF12404 Peptidase YZOS03_24000 PF00883 Cytosol aminopeptidase family, catalytic domain YZOS03_24010 PF04384 Iron-sulphur cluster assembly YZOS03_24020 PF00111 2Fe-2S iron-sulfur cluster binding domain YZOS03_24030 PF00012 Hsp70 protein YZOS03_24040 PF00226 DnaJ domain YZOS03_24040 PF07743 HSCB C-terminal oligomerisation domain YZOS03_24050 PF01521 Iron-sulphur cluster biosynthesis YZOS03_24060 PF01592 NifU-like N terminal domain YZOS03_24070 PF00266 Aminotransferase class-V YZOS03_24080 PF02082 Transcriptional regulator YZOS03_24090 PF00588 SpoU rRNA Methylase family YZOS03_24100 PF00459 Inositol monophosphatase family YZOS03_24110 PF07549 SecD/SecF GG Motif YZOS03_24110 PF02355 Protein export membrane protein YZOS03_24120 PF07549 SecD/SecF GG Motif YZOS03_24120 PF13721 SecD export protein N-terminal TM region YZOS03_24120 PF02355 Protein export membrane protein YZOS03_24130 PF02699 Preprotein translocase subunit YZOS03_24140 PF01702 Queuine tRNA-ribosyltransferase YZOS03_24150 PF02547 Queuosine biosynthesis protein YZOS03_24170 PF00571 CBS domain YZOS03_24180 PF00463 Isocitrate lyase family YZOS03_24190 PF01274 Malate synthase YZOS03_24200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_24200 PF03466 LysR substrate binding domain YZOS03_24210 PF10417 C-terminal domain of 1-Cys peroxiredoxin YZOS03_24210 PF00578 AhpC/TSA family YZOS03_24220 PF03932 CutC family YZOS03_24230 PF03976 Polyphosphate kinase 2 (PPK2) YZOS03_24240 PF01895 PhoU domain YZOS03_24250 PF00005 ABC transporter YZOS03_24260 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_24270 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_24280 PF02503 Polyphosphate kinase middle domain YZOS03_24280 PF13090 Polyphosphate kinase C-terminal domain 2 YZOS03_24280 PF17941 Polyphosphate kinase C-terminal domain 1 YZOS03_24280 PF13089 Polyphosphate kinase N-terminal domain YZOS03_24290 PF02541 Ppx/GppA phosphatase family YZOS03_24300 PF12849 PBP superfamily domain YZOS03_24310 PF11808 Phosphate regulon sensor protein PhoR YZOS03_24310 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_24310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_24310 PF00989 PAS fold YZOS03_24320 PF00072 Response regulator receiver domain YZOS03_24320 PF00486 Transcriptional regulatory protein, C terminal YZOS03_24330 PF00072 Response regulator receiver domain YZOS03_24330 PF00486 Transcriptional regulatory protein, C terminal YZOS03_24340 PF04381 Putative exonuclease, RdgC YZOS03_24350 PF01136 Peptidase family U32 YZOS03_24350 PF16325 Peptidase family U32 C-terminal domain YZOS03_24360 PF12838 4Fe-4S dicluster domain YZOS03_24380 PF03411 Penicillin-insensitive murein endopeptidase YZOS03_24400 PF10431 C-terminal, D2-small domain, of ClpB protein YZOS03_24400 PF02861 Clp amino terminal domain, pathogenicity island component YZOS03_24400 PF07724 AAA domain (Cdc48 subfamily) YZOS03_24400 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_24400 PF17871 AAA lid domain YZOS03_24410 PF02578 Multi-copper polyphenol oxidoreductase laccase YZOS03_24420 PF00849 RNA pseudouridylate synthase YZOS03_24420 PF01479 S4 domain YZOS03_24430 PF13525 Outer membrane lipoprotein YZOS03_24440 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_24440 PF01464 Transglycosylase SLT domain YZOS03_24450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YZOS03_24460 PF01817 Chorismate mutase type II YZOS03_24460 PF00800 Prephenate dehydratase YZOS03_24470 PF01931 Protein of unknown function DUF84 YZOS03_24480 PF01371 Trp repressor protein YZOS03_24490 PF01464 Transglycosylase SLT domain YZOS03_24490 PF14718 Soluble lytic murein transglycosylase L domain YZOS03_24500 PF00005 ABC transporter YZOS03_24500 PF12848 ABC transporter YZOS03_24510 PF07238 PilZ domain YZOS03_24520 PF01551 Peptidase family M23 YZOS03_24520 PF04225 Opacity-associated protein A LysM-like domain YZOS03_24530 PF01817 Chorismate mutase type II YZOS03_24530 PF02153 Prephenate dehydrogenase YZOS03_24540 PF00793 DAHP synthetase I family YZOS03_24550 PF00933 Glycosyl hydrolase family 3 N terminal domain YZOS03_24560 PF03702 Anhydro-N-acetylmuramic acid kinase YZOS03_24570 PF01380 SIS domain YZOS03_24600 PF02554 Carbon starvation protein CstA YZOS03_24610 PF06580 Histidine kinase YZOS03_24610 PF07694 5TMR of 5TMR-LYT YZOS03_24620 PF04397 LytTr DNA-binding domain YZOS03_24620 PF00072 Response regulator receiver domain YZOS03_24640 PF02401 LytB protein YZOS03_24650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YZOS03_24660 PF01252 Signal peptidase (SPase) II YZOS03_24670 PF08264 Anticodon-binding domain of tRNA YZOS03_24670 PF00133 tRNA synthetases class I (I, L, M and V) YZOS03_24670 PF06827 Zinc finger found in FPG and IleRS YZOS03_24680 PF06574 FAD synthetase YZOS03_24680 PF01687 Riboflavin kinase YZOS03_24690 PF03023 Lipid II flippase MurJ YZOS03_24700 PF01649 Ribosomal protein S20 YZOS03_24710 PF01022 Bacterial regulatory protein, arsR family YZOS03_24720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_24720 PF03466 LysR substrate binding domain YZOS03_24730 PF02690 Na+/Pi-cotransporter YZOS03_24750 PF00303 Thymidylate synthase YZOS03_24760 PF01790 Prolipoprotein diacylglyceryl transferase YZOS03_24770 PF01925 Sulfite exporter TauE/SafE YZOS03_24780 PF05524 PEP-utilising enzyme, N-terminal YZOS03_24780 PF01590 GAF domain YZOS03_24780 PF02896 PEP-utilising enzyme, TIM barrel domain YZOS03_24780 PF00391 PEP-utilising enzyme, mobile domain YZOS03_24790 PF00293 NUDIX domain YZOS03_24800 PF02976 DNA mismatch repair enzyme MutH YZOS03_24820 PF00248 Aldo/keto reductase family YZOS03_24840 PF02954 Bacterial regulatory protein, Fis family YZOS03_24840 PF00072 Response regulator receiver domain YZOS03_24840 PF00158 Sigma-54 interaction domain YZOS03_24850 PF00152 tRNA synthetases class II (D, K and N) YZOS03_24850 PF01336 OB-fold nucleic acid binding domain YZOS03_24860 PF03462 PCRF domain YZOS03_24860 PF00472 RF-1 domain YZOS03_24870 PF02272 DHHA1 domain YZOS03_24870 PF01368 DHH family YZOS03_24870 PF17768 RecJ OB domain YZOS03_24880 PF13098 Thioredoxin-like domain YZOS03_24880 PF10411 Disulfide bond isomerase protein N-terminus YZOS03_24890 PF02899 Phage integrase, N-terminal SAM-like domain YZOS03_24890 PF00589 Phage integrase family YZOS03_24900 PF00258 Flavodoxin YZOS03_24910 PF05525 Branched-chain amino acid transport protein YZOS03_24920 PF05175 Methyltransferase small domain YZOS03_24930 PF00270 DEAD/DEAH box helicase YZOS03_24930 PF00271 Helicase conserved C-terminal domain YZOS03_24940 PF03883 Peroxide stress protein YaaA YZOS03_24950 PF01235 Sodium:alanine symporter family YZOS03_24980 PF03167 Uracil DNA glycosylase superfamily YZOS03_24990 PF01261 Xylose isomerase-like TIM barrel YZOS03_25000 PF01228 Glycine radical YZOS03_25020 PF14821 Threonine synthase N terminus YZOS03_25020 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_25030 PF08544 GHMP kinases C terminal YZOS03_25030 PF00288 GHMP kinases N terminal domain YZOS03_25040 PF00742 Homoserine dehydrogenase YZOS03_25040 PF01842 ACT domain YZOS03_25040 PF03447 Homoserine dehydrogenase, NAD binding domain YZOS03_25040 PF13840 ACT domain YZOS03_25040 PF00696 Amino acid kinase family YZOS03_25060 PF03737 Aldolase/RraA YZOS03_25070 PF00072 Response regulator receiver domain YZOS03_25070 PF00486 Transcriptional regulatory protein, C terminal YZOS03_25090 PF01627 Hpt domain YZOS03_25090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_25090 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_25090 PF18415 Histidine kinase receptor ArcB trans-membrane domain YZOS03_25090 PF00989 PAS fold YZOS03_25090 PF00072 Response regulator receiver domain YZOS03_25100 PF00072 Response regulator receiver domain YZOS03_25100 PF00989 PAS fold YZOS03_25100 PF01627 Hpt domain YZOS03_25100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_25100 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_25100 PF18415 Histidine kinase receptor ArcB trans-membrane domain YZOS03_25110 PF00360 Phytochrome region YZOS03_25110 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_25110 PF00563 EAL domain YZOS03_25110 PF01590 GAF domain YZOS03_25120 PF16199 Radical_SAM C-terminal domain YZOS03_25120 PF04055 Radical SAM superfamily YZOS03_25130 PF00310 Glutamine amidotransferases class-II YZOS03_25130 PF04898 Glutamate synthase central domain YZOS03_25130 PF01645 Conserved region in glutamate synthase YZOS03_25130 PF01493 GXGXG motif YZOS03_25140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YZOS03_25140 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_25150 PF00310 Glutamine amidotransferases class-II YZOS03_25150 PF04898 Glutamate synthase central domain YZOS03_25150 PF01645 Conserved region in glutamate synthase YZOS03_25150 PF01493 GXGXG motif YZOS03_25160 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_25160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YZOS03_25180 PF01048 Phosphorylase superfamily YZOS03_25190 PF03186 CobD/Cbib protein YZOS03_25190 PF17113 Regulatory signalling modulator protein AmpE YZOS03_25200 PF01497 Periplasmic binding protein YZOS03_25210 PF03458 UPF0126 domain YZOS03_25220 PF03466 LysR substrate binding domain YZOS03_25220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_25230 PF01925 Sulfite exporter TauE/SafE YZOS03_25260 PF02142 MGS-like domain YZOS03_25260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YZOS03_25260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YZOS03_25270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YZOS03_25270 PF00117 Glutamine amidotransferase class-I YZOS03_25280 PF01113 Dihydrodipicolinate reductase, N-terminus YZOS03_25280 PF05173 Dihydrodipicolinate reductase, C-terminus YZOS03_25290 PF00293 NUDIX domain YZOS03_25300 PF07516 SecA Wing and Scaffold domain YZOS03_25300 PF01043 SecA preprotein cross-linking domain YZOS03_25300 PF07517 SecA DEAD-like domain YZOS03_25300 PF02810 SEC-C motif YZOS03_25320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YZOS03_25330 PF12327 FtsZ family, C-terminal domain YZOS03_25330 PF00091 Tubulin/FtsZ family, GTPase domain YZOS03_25340 PF02491 SHS2 domain inserted in FTSA YZOS03_25350 PF08478 POTRA domain, FtsQ-type YZOS03_25350 PF03799 Cell division protein FtsQ YZOS03_25360 PF08245 Mur ligase middle domain YZOS03_25360 PF02875 Mur ligase family, glutamate ligase domain YZOS03_25360 PF01225 Mur ligase family, catalytic domain YZOS03_25370 PF03033 Glycosyltransferase family 28 N-terminal domain YZOS03_25370 PF04101 Glycosyltransferase family 28 C-terminal domain YZOS03_25380 PF01098 Cell cycle protein YZOS03_25390 PF02875 Mur ligase family, glutamate ligase domain YZOS03_25390 PF08245 Mur ligase middle domain YZOS03_25400 PF00953 Glycosyl transferase family 4 YZOS03_25400 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YZOS03_25410 PF02875 Mur ligase family, glutamate ligase domain YZOS03_25410 PF08245 Mur ligase middle domain YZOS03_25410 PF01225 Mur ligase family, catalytic domain YZOS03_25420 PF08245 Mur ligase middle domain YZOS03_25420 PF01225 Mur ligase family, catalytic domain YZOS03_25420 PF02875 Mur ligase family, glutamate ligase domain YZOS03_25430 PF00905 Penicillin binding protein transpeptidase domain YZOS03_25430 PF03717 Penicillin-binding Protein dimerisation domain YZOS03_25440 PF00905 Penicillin binding protein transpeptidase domain YZOS03_25440 PF03717 Penicillin-binding Protein dimerisation domain YZOS03_25450 PF04999 Cell division protein FtsL YZOS03_25460 PF01795 MraW methylase family YZOS03_25470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YZOS03_25480 PF04348 LppC putative lipoprotein YZOS03_25490 PF02021 Uncharacterised protein family UPF0102 YZOS03_25500 PF13580 SIS domain YZOS03_25510 PF04972 BON domain YZOS03_25520 PF04386 Stringent starvation protein B YZOS03_25530 PF02798 Glutathione S-transferase, N-terminal domain YZOS03_25530 PF00043 Glutathione S-transferase, C-terminal domain YZOS03_25540 PF02167 Cytochrome C1 family YZOS03_25550 PF00033 Cytochrome b/b6/petB YZOS03_25550 PF00032 Cytochrome b(C-terminal)/b6/petD YZOS03_25560 PF00355 Rieske [2Fe-2S] domain YZOS03_25560 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal YZOS03_25570 PF00380 Ribosomal protein S9/S16 YZOS03_25580 PF00572 Ribosomal protein L13 YZOS03_25590 PF03969 AFG1-like ATPase YZOS03_25600 PF06295 Protein of unknown function (DUF1043) YZOS03_25610 PF00595 PDZ domain YZOS03_25620 PF13180 PDZ domain YZOS03_25630 PF03989 DNA gyrase C-terminal domain, beta-propeller YZOS03_25630 PF00521 DNA gyrase/topoisomerase IV, subunit A YZOS03_25640 PF00204 DNA gyrase B YZOS03_25640 PF01751 Toprim domain YZOS03_25640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_25640 PF00986 DNA gyrase B subunit, carboxyl terminus YZOS03_25650 PF05728 Uncharacterised protein family (UPF0227) YZOS03_25660 PF00149 Calcineurin-like phosphoesterase YZOS03_25670 PF06853 Protein of unknown function (DUF1249) YZOS03_25680 PF00293 NUDIX domain YZOS03_25690 PF02321 Outer membrane efflux protein YZOS03_25700 PF01467 Cytidylyltransferase-like YZOS03_25700 PF00294 pfkB family carbohydrate kinase YZOS03_25710 PF08335 GlnD PII-uridylyltransferase YZOS03_25710 PF03710 Glutamate-ammonia ligase adenylyltransferase YZOS03_25720 PF03710 Glutamate-ammonia ligase adenylyltransferase YZOS03_25720 PF08335 GlnD PII-uridylyltransferase YZOS03_25730 PF00672 HAMP domain YZOS03_25730 PF02743 Cache domain YZOS03_25730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_25750 PF01928 CYTH domain YZOS03_25760 PF01865 Protein of unknown function DUF47 YZOS03_25770 PF01384 Phosphate transporter family YZOS03_25780 PF08239 Bacterial SH3 domain YZOS03_25810 PF01471 Putative peptidoglycan binding domain YZOS03_25810 PF13401 AAA domain YZOS03_25820 PF12627 Probable RNA and SrmB- binding site of polymerase A YZOS03_25820 PF01743 Poly A polymerase head domain YZOS03_25820 PF01966 HD domain YZOS03_25830 PF02673 Bacitracin resistance protein BacA YZOS03_25840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YZOS03_25850 PF02152 Dihydroneopterin aldolase YZOS03_25860 PF02660 Glycerol-3-phosphate acyltransferase YZOS03_25870 PF00561 alpha/beta hydrolase fold YZOS03_25880 PF00814 Glycoprotease family YZOS03_25890 PF01165 Ribosomal protein S21 YZOS03_25900 PF09424 Yqey-like protein YZOS03_25910 PF01807 CHC2 zinc finger YZOS03_25910 PF08275 DNA primase catalytic core, N-terminal domain YZOS03_25910 PF08278 DNA primase DnaG DnaB-binding YZOS03_25910 PF10410 DnaB-helicase binding domain of primase YZOS03_25920 PF03979 Sigma-70 factor, region 1.1 YZOS03_25920 PF04546 Sigma-70, non-essential region YZOS03_25920 PF00140 Sigma-70 factor, region 1.2 YZOS03_25920 PF04542 Sigma-70 region 2 YZOS03_25920 PF04539 Sigma-70 region 3 YZOS03_25920 PF04545 Sigma-70, region 4 YZOS03_25930 PF03180 NLPA lipoprotein YZOS03_25970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YZOS03_25970 PF02378 Phosphotransferase system, EIIC YZOS03_25970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YZOS03_25980 PF01232 Mannitol dehydrogenase Rossmann domain YZOS03_25980 PF08125 Mannitol dehydrogenase C-terminal domain YZOS03_25990 PF05068 Mannitol repressor YZOS03_26000 PF00989 PAS fold YZOS03_26000 PF00158 Sigma-54 interaction domain YZOS03_26000 PF02954 Bacterial regulatory protein, Fis family YZOS03_26010 PF05524 PEP-utilising enzyme, N-terminal YZOS03_26010 PF00391 PEP-utilising enzyme, mobile domain YZOS03_26010 PF02896 PEP-utilising enzyme, TIM barrel domain YZOS03_26020 PF02734 DAK2 domain YZOS03_26030 PF02734 DAK2 domain YZOS03_26040 PF02733 Dak1 domain YZOS03_26050 PF00465 Iron-containing alcohol dehydrogenase YZOS03_26060 PF01380 SIS domain YZOS03_26070 PF08220 DeoR-like helix-turn-helix domain YZOS03_26070 PF00455 DeoR C terminal sensor domain YZOS03_26080 PF02887 Pyruvate kinase, alpha/beta domain YZOS03_26080 PF00224 Pyruvate kinase, barrel domain YZOS03_26100 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_26110 PF10369 Small subunit of acetolactate synthase YZOS03_26120 PF00205 Thiamine pyrophosphate enzyme, central domain YZOS03_26120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YZOS03_26120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YZOS03_26130 PF00501 AMP-binding enzyme YZOS03_26140 PF03466 LysR substrate binding domain YZOS03_26140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_26160 PF01569 PAP2 superfamily YZOS03_26180 PF00682 HMGL-like YZOS03_26180 PF08502 LeuA allosteric (dimerisation) domain YZOS03_26190 PF00180 Isocitrate/isopropylmalate dehydrogenase YZOS03_26200 PF00330 Aconitase family (aconitate hydratase) YZOS03_26210 PF00694 Aconitase C-terminal domain YZOS03_26230 PF00226 DnaJ domain YZOS03_26230 PF05099 Tellurite resistance protein TerB YZOS03_26240 PF04453 LPS transport system D YZOS03_26240 PF03968 OstA-like protein YZOS03_26250 PF09312 SurA N-terminal domain YZOS03_26260 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YZOS03_26270 PF00398 Ribosomal RNA adenine dimethylase YZOS03_26280 PF04379 ApaG domain YZOS03_26290 PF00149 Calcineurin-like phosphoesterase YZOS03_26300 PF00186 Dihydrofolate reductase YZOS03_26310 PF12821 Threonine/Serine exporter, ThrE YZOS03_26320 PF06738 Putative threonine/serine exporter YZOS03_26330 PF01018 GTP1/OBG YZOS03_26330 PF01926 50S ribosome-binding GTPase YZOS03_26340 PF01016 Ribosomal L27 protein YZOS03_26350 PF00829 Ribosomal prokaryotic L21 protein YZOS03_26360 PF00348 Polyprenyl synthetase YZOS03_26380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YZOS03_26380 PF00056 lactate/malate dehydrogenase, NAD binding domain YZOS03_26390 PF01316 Arginine repressor, DNA binding domain YZOS03_26390 PF02863 Arginine repressor, C-terminal domain YZOS03_26400 PF16868 NMT1-like family YZOS03_26430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YZOS03_26440 PF03466 LysR substrate binding domain YZOS03_26440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_26450 PF00005 ABC transporter YZOS03_26460 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_26480 PF02441 Flavoprotein YZOS03_26490 PF01225 Mur ligase family, catalytic domain YZOS03_26490 PF02875 Mur ligase family, glutamate ligase domain YZOS03_26490 PF08245 Mur ligase middle domain YZOS03_26500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain YZOS03_26510 PF00719 Inorganic pyrophosphatase YZOS03_26530 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like YZOS03_26540 PF04357 TamB, inner membrane protein subunit of TAM complex YZOS03_26550 PF01103 Surface antigen YZOS03_26550 PF07244 Surface antigen variable number repeat YZOS03_26550 PF17243 POTRA domain TamA domain 1 YZOS03_26560 PF01625 Peptide methionine sulfoxide reductase YZOS03_26570 PF06526 Protein of unknown function (DUF1107) YZOS03_26580 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) YZOS03_26600 PF00005 ABC transporter YZOS03_26650 PF03600 Citrate transporter YZOS03_26650 PF02080 TrkA-C domain YZOS03_26660 PF00009 Elongation factor Tu GTP binding domain YZOS03_26670 PF01507 Phosphoadenosine phosphosulfate reductase family YZOS03_26680 PF10414 Sirohaem synthase dimerisation region YZOS03_26680 PF14824 Sirohaem biosynthesis protein central YZOS03_26680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YZOS03_26690 PF02872 5'-nucleotidase, C-terminal domain YZOS03_26690 PF00149 Calcineurin-like phosphoesterase YZOS03_26710 PF00270 DEAD/DEAH box helicase YZOS03_26710 PF00271 Helicase conserved C-terminal domain YZOS03_26710 PF03880 DbpA RNA binding domain YZOS03_26720 PF13673 Acetyltransferase (GNAT) domain YZOS03_26740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YZOS03_26740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YZOS03_26770 PF01196 Ribosomal protein L17 YZOS03_26780 PF01000 RNA polymerase Rpb3/RpoA insert domain YZOS03_26780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YZOS03_26780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YZOS03_26790 PF00163 Ribosomal protein S4/S9 N-terminal domain YZOS03_26790 PF01479 S4 domain YZOS03_26800 PF00411 Ribosomal protein S11 YZOS03_26810 PF00416 Ribosomal protein S13/S18 YZOS03_26820 PF00344 SecY translocase YZOS03_26830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YZOS03_26840 PF00327 Ribosomal protein L30p/L7e YZOS03_26850 PF00333 Ribosomal protein S5, N-terminal domain YZOS03_26850 PF03719 Ribosomal protein S5, C-terminal domain YZOS03_26860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YZOS03_26870 PF00347 Ribosomal protein L6 YZOS03_26880 PF00410 Ribosomal protein S8 YZOS03_26890 PF00253 Ribosomal protein S14p/S29e YZOS03_26900 PF00281 Ribosomal protein L5 YZOS03_26900 PF00673 ribosomal L5P family C-terminus YZOS03_26910 PF00467 KOW motif YZOS03_26910 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YZOS03_26920 PF00238 Ribosomal protein L14p/L23e YZOS03_26930 PF00366 Ribosomal protein S17 YZOS03_26940 PF00831 Ribosomal L29 protein YZOS03_26950 PF00252 Ribosomal protein L16p/L10e YZOS03_26960 PF07650 KH domain YZOS03_26960 PF00189 Ribosomal protein S3, C-terminal domain YZOS03_26970 PF00237 Ribosomal protein L22p/L17e YZOS03_26980 PF00203 Ribosomal protein S19 YZOS03_26990 PF00181 Ribosomal Proteins L2, RNA binding domain YZOS03_26990 PF03947 Ribosomal Proteins L2, C-terminal domain YZOS03_27000 PF00276 Ribosomal protein L23 YZOS03_27010 PF00573 Ribosomal protein L4/L1 family YZOS03_27020 PF00297 Ribosomal protein L3 YZOS03_27030 PF00338 Ribosomal protein S10p/S20e YZOS03_27040 PF01197 Ribosomal protein L31 YZOS03_27050 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YZOS03_27050 PF18074 Primosomal protein N C-terminal domain YZOS03_27050 PF17764 3′ DNA-binding domain (3′BD) YZOS03_27050 PF00271 Helicase conserved C-terminal domain YZOS03_27050 PF00270 DEAD/DEAH box helicase YZOS03_27060 PF00356 Bacterial regulatory proteins, lacI family YZOS03_27080 PF00227 Proteasome subunit YZOS03_27090 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_27090 PF07724 AAA domain (Cdc48 subfamily) YZOS03_27100 PF01040 UbiA prenyltransferase family YZOS03_27110 PF03737 Aldolase/RraA YZOS03_27120 PF06005 Cell division protein ZapB YZOS03_27130 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YZOS03_27140 PF00455 DeoR C terminal sensor domain YZOS03_27140 PF08220 DeoR-like helix-turn-helix domain YZOS03_27190 PF00121 Triosephosphate isomerase YZOS03_27200 PF00483 Nucleotidyl transferase YZOS03_27210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YZOS03_27210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YZOS03_27210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YZOS03_27240 PF00534 Glycosyl transferases group 1 YZOS03_27250 PF01370 NAD dependent epimerase/dehydratase family YZOS03_27300 PF00535 Glycosyl transferase family 2 YZOS03_27330 PF01565 FAD binding domain YZOS03_27330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YZOS03_27340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YZOS03_27350 PF00953 Glycosyl transferase family 4 YZOS03_27360 PF00753 Metallo-beta-lactamase superfamily YZOS03_27360 PF10996 Beta-Casp domain YZOS03_27360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YZOS03_27370 PF02397 Bacterial sugar transferase YZOS03_27380 PF00535 Glycosyl transferase family 2 YZOS03_27460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YZOS03_27480 PF05523 WxcM-like, C-terminal YZOS03_27490 PF00483 Nucleotidyl transferase YZOS03_27500 PF16363 GDP-mannose 4,6 dehydratase YZOS03_27520 PF02563 Polysaccharide biosynthesis/export protein YZOS03_27520 PF10531 SLBB domain YZOS03_27520 PF18412 Outer-membrane lipoprotein Wza C-terminal domain YZOS03_27570 PF06082 Exopolysaccharide biosynthesis protein YbjH YZOS03_27580 PF01370 NAD dependent epimerase/dehydratase family YZOS03_27590 PF03279 Bacterial lipid A biosynthesis acyltransferase YZOS03_27620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YZOS03_27630 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YZOS03_27640 PF00682 HMGL-like YZOS03_27640 PF07836 DmpG-like communication domain YZOS03_27690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YZOS03_27710 PF05523 WxcM-like, C-terminal YZOS03_27720 PF00483 Nucleotidyl transferase YZOS03_27730 PF16363 GDP-mannose 4,6 dehydratase YZOS03_27750 PF01219 Prokaryotic diacylglycerol kinase YZOS03_27760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YZOS03_27770 PF00535 Glycosyl transferase family 2 YZOS03_27780 PF00535 Glycosyl transferase family 2 YZOS03_27790 PF05686 Glycosyl transferase family 90 YZOS03_27800 PF01467 Cytidylyltransferase-like YZOS03_27810 PF06827 Zinc finger found in FPG and IleRS YZOS03_27810 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YZOS03_27810 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YZOS03_27830 PF00471 Ribosomal protein L33 YZOS03_27840 PF00830 Ribosomal L28 family YZOS03_27850 PF04002 RadC-like JAB domain YZOS03_27860 PF02743 Cache domain YZOS03_27860 PF00672 HAMP domain YZOS03_27860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_27870 PF17200 Single Cache domain 2 YZOS03_27870 PF00672 HAMP domain YZOS03_27870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_27880 PF02441 Flavoprotein YZOS03_27880 PF04127 DNA / pantothenate metabolism flavoprotein YZOS03_27890 PF00440 Bacterial regulatory proteins, tetR family YZOS03_27900 PF03279 Bacterial lipid A biosynthesis acyltransferase YZOS03_27910 PF00156 Phosphoribosyl transferase domain YZOS03_27920 PF01138 3' exoribonuclease family, domain 1 YZOS03_27920 PF03725 3' exoribonuclease family, domain 2 YZOS03_27930 PF08340 Domain of unknown function (DUF1732) YZOS03_27930 PF03755 YicC-like family, N-terminal region YZOS03_27940 PF08340 Domain of unknown function (DUF1732) YZOS03_27940 PF03755 YicC-like family, N-terminal region YZOS03_27960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_27960 PF00005 ABC transporter YZOS03_27970 PF00005 ABC transporter YZOS03_27970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_27980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_27990 PF12911 N-terminal TM domain of oligopeptide transport permease C YZOS03_27990 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_28000 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_28010 PF00593 TonB dependent receptor YZOS03_28010 PF07715 TonB-dependent Receptor Plug Domain YZOS03_28040 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_28050 PF02472 Biopolymer transport protein ExbD/TolR YZOS03_28080 PF00625 Guanylate kinase YZOS03_28090 PF01192 RNA polymerase Rpb6 YZOS03_28100 PF04607 Region found in RelA / SpoT proteins YZOS03_28100 PF13291 ACT domain YZOS03_28100 PF02824 TGS domain YZOS03_28110 PF00588 SpoU rRNA Methylase family YZOS03_28110 PF12105 SpoU, rRNA methylase, C-terminal YZOS03_28120 PF00270 DEAD/DEAH box helicase YZOS03_28120 PF00271 Helicase conserved C-terminal domain YZOS03_28120 PF17191 RecG wedge domain YZOS03_28130 PF00860 Permease family YZOS03_28140 PF00672 HAMP domain YZOS03_28140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_28140 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_28150 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_28150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_28150 PF00672 HAMP domain YZOS03_28160 PF00486 Transcriptional regulatory protein, C terminal YZOS03_28160 PF00072 Response regulator receiver domain YZOS03_28180 PF03449 Transcription elongation factor, N-terminal YZOS03_28180 PF01272 Transcription elongation factor, GreA/GreB, C-term YZOS03_28210 PF00575 S1 RNA binding domain YZOS03_28210 PF09371 Tex-like protein N-terminal domain YZOS03_28210 PF16921 Tex protein YqgF-like domain YZOS03_28210 PF17674 HHH domain YZOS03_28230 PF00561 alpha/beta hydrolase fold YZOS03_28240 PF00156 Phosphoribosyl transferase domain YZOS03_28250 PF01106 NifU-like domain YZOS03_28250 PF01521 Iron-sulphur cluster biosynthesis YZOS03_28260 PF00293 NUDIX domain YZOS03_28270 PF00459 Inositol monophosphatase family YZOS03_28280 PF01203 Type II secretion system (T2SS), protein N YZOS03_28290 PF04612 Type II secretion system (T2SS), protein M YZOS03_28300 PF05134 Type II secretion system (T2SS), protein L YZOS03_28300 PF12693 GspL periplasmic domain YZOS03_28310 PF03934 Type II secretion system (T2SS), protein K YZOS03_28320 PF11612 Type II secretion system (T2SS), protein J YZOS03_28320 PF07963 Prokaryotic N-terminal methylation motif YZOS03_28330 PF07963 Prokaryotic N-terminal methylation motif YZOS03_28330 PF02501 Type II secretion system (T2SS), protein I YZOS03_28340 PF12019 Type II transport protein GspH YZOS03_28350 PF07963 Prokaryotic N-terminal methylation motif YZOS03_28350 PF08334 Type II secretion system (T2SS), protein G YZOS03_28360 PF00482 Type II secretion system (T2SS), protein F YZOS03_28370 PF00437 Type II/IV secretion system protein YZOS03_28380 PF00263 Bacterial type II and III secretion system protein YZOS03_28380 PF03958 Bacterial type II/III secretion system short domain YZOS03_28390 PF11356 Type II secretion system protein C YZOS03_28400 PF01479 S4 domain YZOS03_28410 PF01430 Hsp33 protein YZOS03_28420 PF01293 Phosphoenolpyruvate carboxykinase YZOS03_28440 PF00583 Acetyltransferase (GNAT) family YZOS03_28440 PF09500 Putative thioesterase (yiiD_Cterm) YZOS03_28450 PF02580 D-Tyr-tRNA(Tyr) deacylase YZOS03_28460 PF03631 Virulence factor BrkB YZOS03_28480 PF00308 Bacterial dnaA protein YZOS03_28480 PF08299 Bacterial dnaA protein helix-turn-helix YZOS03_28490 PF00679 Elongation factor G C-terminus YZOS03_28490 PF00009 Elongation factor Tu GTP binding domain YZOS03_28490 PF03144 Elongation factor Tu domain 2 YZOS03_28500 PF00120 Glutamine synthetase, catalytic domain YZOS03_28500 PF03951 Glutamine synthetase, beta-Grasp domain YZOS03_28520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_28520 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_28520 PF00989 PAS fold YZOS03_28530 PF00072 Response regulator receiver domain YZOS03_28530 PF02954 Bacterial regulatory protein, Fis family YZOS03_28530 PF00158 Sigma-54 interaction domain YZOS03_28540 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_28540 PF03707 Bacterial signalling protein N terminal repeat YZOS03_28540 PF00563 EAL domain YZOS03_28550 PF00962 Adenosine/AMP deaminase YZOS03_28560 PF06969 HemN C-terminal domain YZOS03_28560 PF04055 Radical SAM superfamily YZOS03_28570 PF10675 Protein of unknown function (DUF2489) YZOS03_28580 PF04220 Der GTPase activator (YihI) YZOS03_28600 PF00034 Cytochrome c YZOS03_28610 PF01926 50S ribosome-binding GTPase YZOS03_28620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YZOS03_28620 PF01367 5'-3' exonuclease, C-terminal SAM fold YZOS03_28620 PF01612 3'-5' exonuclease YZOS03_28620 PF00476 DNA polymerase family A YZOS03_28630 PF00583 Acetyltransferase (GNAT) family YZOS03_28640 PF00490 Delta-aminolevulinic acid dehydratase YZOS03_28650 PF01026 TatD related DNase YZOS03_28660 PF00902 Sec-independent protein translocase protein (TatC) YZOS03_28670 PF00902 Sec-independent protein translocase protein (TatC) YZOS03_28680 PF02416 mttA/Hcf106 family YZOS03_28690 PF02416 mttA/Hcf106 family YZOS03_28700 PF03109 ABC1 family YZOS03_28710 PF02036 SCP-2 sterol transfer family YZOS03_28720 PF01209 ubiE/COQ5 methyltransferase family YZOS03_28730 PF02646 RmuC family YZOS03_28750 PF03707 Bacterial signalling protein N terminal repeat YZOS03_28750 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_28750 PF00563 EAL domain YZOS03_28760 PF01594 AI-2E family transporter YZOS03_28820 PF00781 Diacylglycerol kinase catalytic domain YZOS03_28870 PF01590 GAF domain YZOS03_28870 PF00158 Sigma-54 interaction domain YZOS03_28870 PF02954 Bacterial regulatory protein, Fis family YZOS03_28890 PF10625 Universal stress protein B (UspB) YZOS03_28900 PF00210 Ferritin-like domain YZOS03_28910 PF00582 Universal stress protein family YZOS03_28920 PF00892 EamA-like transporter family YZOS03_28940 PF04445 Putative SAM-dependent methyltransferase YZOS03_28950 PF08448 PAS fold YZOS03_28950 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_28950 PF00563 EAL domain YZOS03_28960 PF01037 Lrp/AsnC ligand binding domain YZOS03_28970 PF01432 Peptidase family M3 YZOS03_28980 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ YZOS03_28990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YZOS03_28990 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_29000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_29000 PF03466 LysR substrate binding domain YZOS03_29010 PF01048 Phosphorylase superfamily YZOS03_29020 PF01081 KDPG and KHG aldolase YZOS03_29030 PF02447 GntP family permease YZOS03_29040 PF01202 Shikimate kinase YZOS03_29050 PF00920 Dehydratase family YZOS03_29060 PF00893 Small Multidrug Resistance protein YZOS03_29070 PF00893 Small Multidrug Resistance protein YZOS03_29080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_29080 PF03466 LysR substrate binding domain YZOS03_29090 PF00356 Bacterial regulatory proteins, lacI family YZOS03_29090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YZOS03_29110 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_29110 PF12911 N-terminal TM domain of oligopeptide transport permease C YZOS03_29120 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_29130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_29140 PF00005 ABC transporter YZOS03_29140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_29150 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_29160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YZOS03_29170 PF00580 UvrD/REP helicase N-terminal domain YZOS03_29170 PF13361 UvrD-like helicase C-terminal domain YZOS03_29180 PF16295 Tetracyclin repressor-like, C-terminal domain YZOS03_29180 PF00440 Bacterial regulatory proteins, tetR family YZOS03_29190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_29200 PF00873 AcrB/AcrD/AcrF family YZOS03_29210 PF04380 Membrane fusogenic activity YZOS03_29220 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YZOS03_29220 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YZOS03_29230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_29230 PF03466 LysR substrate binding domain YZOS03_29240 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_29250 PF07369 Protein of unknown function (DUF1488) YZOS03_29260 PF01488 Shikimate / quinate 5-dehydrogenase YZOS03_29260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YZOS03_29260 PF08501 Shikimate dehydrogenase substrate binding domain YZOS03_29270 PF01218 Coproporphyrinogen III oxidase YZOS03_29280 PF01300 Telomere recombination YZOS03_29290 PF00731 AIR carboxylase YZOS03_29300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YZOS03_29300 PF02222 ATP-grasp domain YZOS03_29310 PF01396 Topoisomerase DNA binding C4 zinc finger YZOS03_29320 PF04361 Protein of unknown function (DUF494) YZOS03_29330 PF17782 DprA winged helix domain YZOS03_29330 PF02481 DNA recombination-mediator protein A YZOS03_29350 PF01327 Polypeptide deformylase YZOS03_29360 PF00551 Formyl transferase YZOS03_29360 PF02911 Formyl transferase, C-terminal domain YZOS03_29370 PF01189 16S rRNA methyltransferase RsmB/F YZOS03_29370 PF01029 NusB family YZOS03_29380 PF02254 TrkA-N domain YZOS03_29380 PF02080 TrkA-C domain YZOS03_29390 PF02386 Cation transport protein YZOS03_29410 PF03006 Haemolysin-III related YZOS03_29420 PF07070 SpoOM protein YZOS03_29440 PF06288 Protein of unknown function (DUF1040) YZOS03_29450 PF13746 4Fe-4S dicluster domain YZOS03_29450 PF12801 4Fe-4S binding domain YZOS03_29450 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase YZOS03_29460 PF01636 Phosphotransferase enzyme family YZOS03_29470 PF01323 DSBA-like thioredoxin domain YZOS03_29480 PF01553 Acyltransferase YZOS03_29510 PF13335 Magnesium chelatase, subunit ChlI C-terminal YZOS03_29510 PF01078 Magnesium chelatase, subunit ChlI YZOS03_29520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YZOS03_29520 PF00205 Thiamine pyrophosphate enzyme, central domain YZOS03_29520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YZOS03_29540 PF01063 Amino-transferase class IV YZOS03_29550 PF00920 Dehydratase family YZOS03_29560 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_29560 PF00585 C-terminal regulatory domain of Threonine dehydratase YZOS03_29570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_29570 PF03466 LysR substrate binding domain YZOS03_29580 PF07690 Major Facilitator Superfamily YZOS03_29590 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_29600 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_29610 PF12804 MobA-like NTP transferase domain YZOS03_29610 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_29620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YZOS03_29620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YZOS03_29630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_29630 PF02874 ATP synthase alpha/beta family, beta-barrel domain YZOS03_29640 PF00231 ATP synthase YZOS03_29650 PF00306 ATP synthase alpha/beta chain, C terminal domain YZOS03_29650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_29650 PF02874 ATP synthase alpha/beta family, beta-barrel domain YZOS03_29660 PF00213 ATP synthase delta (OSCP) subunit YZOS03_29670 PF00430 ATP synthase B/B' CF(0) YZOS03_29680 PF00137 ATP synthase subunit C YZOS03_29690 PF00119 ATP synthase A chain YZOS03_29700 PF03899 ATP synthase I chain YZOS03_29710 PF17762 HTH domain found in ParB protein YZOS03_29710 PF02195 ParB-like nuclease domain YZOS03_29720 PF13614 AAA domain YZOS03_29730 PF02527 rRNA small subunit methyltransferase G YZOS03_29740 PF01134 Glucose inhibited division protein A YZOS03_29740 PF13932 GidA associated domain YZOS03_29750 PF00258 Flavodoxin YZOS03_29760 PF01926 50S ribosome-binding GTPase YZOS03_29760 PF12631 MnmE helical domain YZOS03_29760 PF10396 GTP-binding protein TrmE N-terminus YZOS03_29770 PF02096 60Kd inner membrane protein YZOS03_29770 PF14849 YidC periplasmic domain YZOS03_29780 PF00825 Ribonuclease P YZOS03_29790 PF00468 Ribosomal protein L34 YZOS03_29800 PF00005 ABC transporter YZOS03_29810 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_29820 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_29890 PF01297 Zinc-uptake complex component A periplasmic YZOS03_29900 PF00005 ABC transporter YZOS03_29910 PF00950 ABC 3 transport family YZOS03_29940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YZOS03_29940 PF00326 Prolyl oligopeptidase family YZOS03_29950 PF07690 Major Facilitator Superfamily YZOS03_29960 PF00491 Arginase family YZOS03_29970 PF17810 Arginine decarboxylase helical bundle domain YZOS03_29970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YZOS03_29970 PF17944 Arginine decarboxylase C-terminal helical extension YZOS03_29980 PF00753 Metallo-beta-lactamase superfamily YZOS03_29990 PF08443 RimK-like ATP-grasp domain YZOS03_29990 PF18030 RimK PreATP-grasp domain YZOS03_30000 PF08443 RimK-like ATP-grasp domain YZOS03_30000 PF18030 RimK PreATP-grasp domain YZOS03_30020 PF12706 Beta-lactamase superfamily domain YZOS03_30040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_30040 PF03466 LysR substrate binding domain YZOS03_30070 PF00232 Glycosyl hydrolase family 1 YZOS03_30080 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_30080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_30080 PF02743 Cache domain YZOS03_30090 PF02954 Bacterial regulatory protein, Fis family YZOS03_30090 PF00072 Response regulator receiver domain YZOS03_30090 PF00158 Sigma-54 interaction domain YZOS03_30100 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_30110 PF05525 Branched-chain amino acid transport protein YZOS03_30140 PF01266 FAD dependent oxidoreductase YZOS03_30160 PF02322 Cytochrome bd terminal oxidase subunit II YZOS03_30170 PF01654 Cytochrome bd terminal oxidase subunit I YZOS03_30180 PF03116 NQR2, RnfD, RnfE family YZOS03_30190 PF01212 Beta-eliminating lyase YZOS03_30210 PF07670 Nucleoside recognition YZOS03_30210 PF01773 Na+ dependent nucleoside transporter N-terminus YZOS03_30210 PF07662 Na+ dependent nucleoside transporter C-terminus YZOS03_30240 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_30240 PF05230 MASE2 domain YZOS03_30270 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_30280 PF03441 FAD binding domain of DNA photolyase YZOS03_30280 PF00875 DNA photolyase YZOS03_30290 PF04244 Deoxyribodipyrimidine photo-lyase-related protein YZOS03_30310 PF01641 SelR domain YZOS03_30310 PF01625 Peptide methionine sulfoxide reductase YZOS03_30320 PF02566 OsmC-like protein YZOS03_30330 PF12464 Maltose acetyltransferase YZOS03_30330 PF14602 Hexapeptide repeat of succinyl-transferase YZOS03_30390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_30390 PF03466 LysR substrate binding domain YZOS03_30400 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_30430 PF00356 Bacterial regulatory proteins, lacI family YZOS03_30430 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) YZOS03_30440 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) YZOS03_30450 PF00194 Eukaryotic-type carbonic anhydrase YZOS03_30460 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YZOS03_30470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_30480 PF00005 ABC transporter YZOS03_30480 PF02687 FtsX-like permease family YZOS03_30480 PF12704 MacB-like periplasmic core domain YZOS03_30490 PF02321 Outer membrane efflux protein YZOS03_30510 PF00440 Bacterial regulatory proteins, tetR family YZOS03_30520 PF00657 GDSL-like Lipase/Acylhydrolase YZOS03_30530 PF00082 Subtilase family YZOS03_30530 PF05922 Peptidase inhibitor I9 YZOS03_30550 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_30560 PF00202 Aminotransferase class-III YZOS03_30570 PF00266 Aminotransferase class-V YZOS03_30590 PF00005 ABC transporter YZOS03_30600 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_30610 PF00392 Bacterial regulatory proteins, gntR family YZOS03_30610 PF07702 UTRA domain YZOS03_30640 PF04393 Protein of unknown function (DUF535) YZOS03_30660 PF01266 FAD dependent oxidoreductase YZOS03_30670 PF00246 Zinc carboxypeptidase YZOS03_30670 PF18027 Cytosolic carboxypeptidase N-terminal domain YZOS03_30690 PF01389 OmpA-like transmembrane domain YZOS03_30690 PF00691 OmpA family YZOS03_30700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_30700 PF03466 LysR substrate binding domain YZOS03_30710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_30710 PF03466 LysR substrate binding domain YZOS03_30730 PF03313 Serine dehydratase alpha chain YZOS03_30730 PF03315 Serine dehydratase beta chain YZOS03_30770 PF00133 tRNA synthetases class I (I, L, M and V) YZOS03_30770 PF08264 Anticodon-binding domain of tRNA YZOS03_30780 PF01476 LysM domain YZOS03_30780 PF01464 Transglycosylase SLT domain YZOS03_30820 PF00460 Flagella basal body rod protein YZOS03_30830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_30830 PF00460 Flagella basal body rod protein YZOS03_30840 PF13861 FlgD Tudor-like domain YZOS03_30840 PF13860 FlgD Ig-like domain YZOS03_30840 PF03963 Flagellar hook capping protein - N-terminal region YZOS03_30850 PF07559 Flagellar basal body protein FlaE YZOS03_30850 PF00460 Flagella basal body rod protein YZOS03_30850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_30860 PF00460 Flagella basal body rod protein YZOS03_30860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_30870 PF00460 Flagella basal body rod protein YZOS03_30870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_30880 PF02107 Flagellar L-ring protein YZOS03_30890 PF02119 Flagellar P-ring protein YZOS03_30900 PF02119 Flagellar P-ring protein YZOS03_30910 PF10135 Rod binding protein YZOS03_30910 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YZOS03_30920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YZOS03_30920 PF00460 Flagella basal body rod protein YZOS03_30930 PF00669 Bacterial flagellin N-terminal helical region YZOS03_30970 PF01070 FMN-dependent dehydrogenase YZOS03_31000 PF00581 Rhodanese-like domain YZOS03_31010 PF00166 Chaperonin 10 Kd subunit YZOS03_31020 PF00118 TCP-1/cpn60 chaperonin family YZOS03_31040 PF01810 LysE type translocator YZOS03_31050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_31050 PF03466 LysR substrate binding domain YZOS03_31080 PF00440 Bacterial regulatory proteins, tetR family YZOS03_31080 PF08359 YsiA-like protein, C-terminal region YZOS03_31090 PF12833 Helix-turn-helix domain YZOS03_31100 PF06751 Ethanolamine ammonia lyase large subunit (EutB) YZOS03_31110 PF05985 Ethanolamine ammonia-lyase light chain (EutC) YZOS03_31120 PF13520 Amino acid permease YZOS03_31140 PF03060 Nitronate monooxygenase YZOS03_31150 PF01625 Peptide methionine sulfoxide reductase YZOS03_31150 PF01641 SelR domain YZOS03_31160 PF00455 DeoR C terminal sensor domain YZOS03_31160 PF08220 DeoR-like helix-turn-helix domain YZOS03_31190 PF00857 Isochorismatase family YZOS03_31210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YZOS03_31210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family YZOS03_31260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_31260 PF03466 LysR substrate binding domain YZOS03_31290 PF06629 MltA-interacting protein MipA YZOS03_31300 PF04170 NlpE N-terminal domain YZOS03_31300 PF17185 NlpE C-terminal OB domain YZOS03_31310 PF00005 ABC transporter YZOS03_31310 PF00571 CBS domain YZOS03_31320 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_31330 PF02001 Protein of unknown function DUF134 YZOS03_31370 PF00009 Elongation factor Tu GTP binding domain YZOS03_31370 PF03764 Elongation factor G, domain IV YZOS03_31370 PF00679 Elongation factor G C-terminus YZOS03_31370 PF03144 Elongation factor Tu domain 2 YZOS03_31370 PF14492 Elongation Factor G, domain II YZOS03_31380 PF13378 Enolase C-terminal domain-like YZOS03_31380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YZOS03_31400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_31400 PF03466 LysR substrate binding domain YZOS03_31420 PF00376 MerR family regulatory protein YZOS03_31420 PF09278 MerR, DNA binding YZOS03_31470 PF13091 PLD-like domain YZOS03_31490 PF00873 AcrB/AcrD/AcrF family YZOS03_31540 PF00873 AcrB/AcrD/AcrF family YZOS03_31580 PF00005 ABC transporter YZOS03_31580 PF08402 TOBE domain YZOS03_31630 PF00392 Bacterial regulatory proteins, gntR family YZOS03_31630 PF07702 UTRA domain YZOS03_31640 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_31650 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 YZOS03_31650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YZOS03_31650 PF00703 Glycosyl hydrolases family 2 YZOS03_31650 PF02837 Glycosyl hydrolases family 2, sugar binding domain YZOS03_31680 PF13416 Bacterial extracellular solute-binding protein YZOS03_31690 PF00579 tRNA synthetases class I (W and Y) YZOS03_31700 PF00196 Bacterial regulatory proteins, luxR family YZOS03_31700 PF00072 Response regulator receiver domain YZOS03_31720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YZOS03_31720 PF02896 PEP-utilising enzyme, TIM barrel domain YZOS03_31720 PF00391 PEP-utilising enzyme, mobile domain YZOS03_31730 PF03618 Kinase/pyrophosphorylase YZOS03_31740 PF00710 Asparaginase, N-terminal YZOS03_31740 PF17763 Glutaminase/Asparaginase C-terminal domain YZOS03_31750 PF00709 Adenylosuccinate synthetase YZOS03_31760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_31760 PF03466 LysR substrate binding domain YZOS03_31790 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) YZOS03_31800 PF00202 Aminotransferase class-III YZOS03_31810 PF00171 Aldehyde dehydrogenase family YZOS03_31820 PF01037 Lrp/AsnC ligand binding domain YZOS03_31830 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YZOS03_31840 PF01321 Creatinase/Prolidase N-terminal domain YZOS03_31840 PF00557 Metallopeptidase family M24 YZOS03_31850 PF00155 Aminotransferase class I and II YZOS03_31850 PF00392 Bacterial regulatory proteins, gntR family YZOS03_31890 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_31890 PF00107 Zinc-binding dehydrogenase YZOS03_31900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YZOS03_31920 PF03466 LysR substrate binding domain YZOS03_31920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_31930 PF03466 LysR substrate binding domain YZOS03_31930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_31950 PF00270 DEAD/DEAH box helicase YZOS03_31950 PF00271 Helicase conserved C-terminal domain YZOS03_32000 PF00155 Aminotransferase class I and II YZOS03_32010 PF12833 Helix-turn-helix domain YZOS03_32010 PF01497 Periplasmic binding protein YZOS03_32020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_32020 PF03466 LysR substrate binding domain YZOS03_32030 PF00106 short chain dehydrogenase YZOS03_32120 PF11471 Maltoporin periplasmic N-terminal extension YZOS03_32120 PF02264 LamB porin YZOS03_32130 PF00356 Bacterial regulatory proteins, lacI family YZOS03_32140 PF02378 Phosphotransferase system, EIIC YZOS03_32140 PF00367 phosphotransferase system, EIIB YZOS03_32150 PF00294 pfkB family carbohydrate kinase YZOS03_32160 PF08244 Glycosyl hydrolases family 32 C terminal YZOS03_32160 PF00251 Glycosyl hydrolases family 32 N-terminal domain YZOS03_32170 PF01872 RibD C-terminal domain YZOS03_32180 PF00440 Bacterial regulatory proteins, tetR family YZOS03_32180 PF02909 Tetracyclin repressor-like, C-terminal domain YZOS03_32190 PF02798 Glutathione S-transferase, N-terminal domain YZOS03_32210 PF00768 D-alanyl-D-alanine carboxypeptidase YZOS03_32210 PF07943 Penicillin-binding protein 5, C-terminal domain YZOS03_32230 PF00462 Glutaredoxin YZOS03_32230 PF08534 Redoxin YZOS03_32240 PF00962 Adenosine/AMP deaminase YZOS03_32270 PF00313 'Cold-shock' DNA-binding domain YZOS03_32280 PF05726 Pirin C-terminal cupin domain YZOS03_32280 PF02678 Pirin YZOS03_32290 PF01734 Patatin-like phospholipase YZOS03_32320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YZOS03_32330 PF08019 Phosphoethanolamine transferase EptA/EptB YZOS03_32330 PF00884 Sulfatase YZOS03_32340 PF01219 Prokaryotic diacylglycerol kinase YZOS03_32360 PF00672 HAMP domain YZOS03_32360 PF16527 Two-component sensor protein CpxA, periplasmic domain YZOS03_32360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_32360 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_32370 PF00486 Transcriptional regulatory protein, C terminal YZOS03_32370 PF00072 Response regulator receiver domain YZOS03_32400 PF01323 DSBA-like thioredoxin domain YZOS03_32430 PF00255 Glutathione peroxidase YZOS03_32440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YZOS03_32460 PF07690 Major Facilitator Superfamily YZOS03_32480 PF01966 HD domain YZOS03_32490 PF07969 Amidohydrolase family YZOS03_32500 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YZOS03_32510 PF01769 Divalent cation transporter YZOS03_32510 PF03448 MgtE intracellular N domain YZOS03_32510 PF00571 CBS domain YZOS03_32520 PF03109 ABC1 family YZOS03_32530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_32530 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_32550 PF12833 Helix-turn-helix domain YZOS03_32550 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YZOS03_32590 PF00072 Response regulator receiver domain YZOS03_32590 PF00486 Transcriptional regulatory protein, C terminal YZOS03_32600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_32600 PF16527 Two-component sensor protein CpxA, periplasmic domain YZOS03_32600 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_32600 PF00672 HAMP domain YZOS03_32620 PF00155 Aminotransferase class I and II YZOS03_32620 PF00392 Bacterial regulatory proteins, gntR family YZOS03_32630 PF13520 Amino acid permease YZOS03_32650 PF03466 LysR substrate binding domain YZOS03_32650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_32700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YZOS03_32700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YZOS03_32710 PF00072 Response regulator receiver domain YZOS03_32710 PF01627 Hpt domain YZOS03_32710 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_32710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_32710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YZOS03_32710 PF00672 HAMP domain YZOS03_32720 PF01554 MatE YZOS03_32730 PF04363 Protein of unknown function (DUF496) YZOS03_32750 PF04337 Protein of unknown function, DUF480 YZOS03_32760 PF01541 GIY-YIG catalytic domain YZOS03_32770 PF13407 Periplasmic binding protein domain YZOS03_32780 PF09308 LuxQ, periplasmic YZOS03_32780 PF00072 Response regulator receiver domain YZOS03_32780 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_32780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_32790 PF01047 MarR family YZOS03_32800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_32800 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_32840 PF01037 Lrp/AsnC ligand binding domain YZOS03_32900 PF07549 SecD/SecF GG Motif YZOS03_32900 PF13721 SecD export protein N-terminal TM region YZOS03_32900 PF02355 Protein export membrane protein YZOS03_32910 PF07549 SecD/SecF GG Motif YZOS03_32910 PF13721 SecD export protein N-terminal TM region YZOS03_32910 PF02355 Protein export membrane protein YZOS03_32920 PF07549 SecD/SecF GG Motif YZOS03_32920 PF02355 Protein export membrane protein YZOS03_32940 PF01810 LysE type translocator YZOS03_32950 PF00106 short chain dehydrogenase YZOS03_32960 PF02803 Thiolase, C-terminal domain YZOS03_32960 PF00108 Thiolase, N-terminal domain YZOS03_32980 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus YZOS03_33000 PF03264 NapC/NirT cytochrome c family, N-terminal region YZOS03_33010 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) YZOS03_33020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YZOS03_33020 PF00384 Molybdopterin oxidoreductase YZOS03_33020 PF01568 Molydopterin dinucleotide binding domain YZOS03_33040 PF00672 HAMP domain YZOS03_33040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_33040 PF07730 Histidine kinase YZOS03_33040 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YZOS03_33050 PF00072 Response regulator receiver domain YZOS03_33050 PF00196 Bacterial regulatory proteins, luxR family YZOS03_33080 PF01546 Peptidase family M20/M25/M40 YZOS03_33080 PF07687 Peptidase dimerisation domain YZOS03_33090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YZOS03_33100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_33110 PF00873 AcrB/AcrD/AcrF family YZOS03_33120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_33120 PF00672 HAMP domain YZOS03_33120 PF12729 Four helix bundle sensory module for signal transduction YZOS03_33130 PF00472 RF-1 domain YZOS03_33140 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_33150 PF01389 OmpA-like transmembrane domain YZOS03_33150 PF00691 OmpA family YZOS03_33170 PF00793 DAHP synthetase I family YZOS03_33180 PF07690 Major Facilitator Superfamily YZOS03_33190 PF12729 Four helix bundle sensory module for signal transduction YZOS03_33190 PF00672 HAMP domain YZOS03_33190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_33200 PF02780 Transketolase, C-terminal domain YZOS03_33200 PF02779 Transketolase, pyrimidine binding domain YZOS03_33200 PF00456 Transketolase, thiamine diphosphate binding domain YZOS03_33210 PF00923 Transaldolase/Fructose-6-phosphate aldolase YZOS03_33230 PF00581 Rhodanese-like domain YZOS03_33260 PF00899 ThiF family YZOS03_33270 PF00994 Probable molybdopterin binding domain YZOS03_33270 PF03453 MoeA N-terminal region (domain I and II) YZOS03_33270 PF03454 MoeA C-terminal region (domain IV) YZOS03_33280 PF01227 GTP cyclohydrolase I YZOS03_33300 PF00654 Voltage gated chloride channel YZOS03_33330 PF00248 Aldo/keto reductase family YZOS03_33340 PF00072 Response regulator receiver domain YZOS03_33360 PF03853 YjeF-related protein N-terminus YZOS03_33360 PF01256 Carbohydrate kinase YZOS03_33370 PF00478 IMP dehydrogenase / GMP reductase domain YZOS03_33380 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family YZOS03_33400 PF08031 Berberine and berberine like YZOS03_33400 PF01565 FAD binding domain YZOS03_33450 PF00551 Formyl transferase YZOS03_33450 PF01370 NAD dependent epimerase/dehydratase family YZOS03_33450 PF02911 Formyl transferase, C-terminal domain YZOS03_33480 PF00392 Bacterial regulatory proteins, gntR family YZOS03_33480 PF00155 Aminotransferase class I and II YZOS03_33490 PF00155 Aminotransferase class I and II YZOS03_33490 PF00392 Bacterial regulatory proteins, gntR family YZOS03_33500 PF00144 Beta-lactamase YZOS03_33510 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_33520 PF01476 LysM domain YZOS03_33520 PF08525 Opacity-associated protein A N-terminal motif YZOS03_33520 PF01551 Peptidase family M23 YZOS03_33590 PF00158 Sigma-54 interaction domain YZOS03_33590 PF02954 Bacterial regulatory protein, Fis family YZOS03_33590 PF00072 Response regulator receiver domain YZOS03_33600 PF07724 AAA domain (Cdc48 subfamily) YZOS03_33600 PF17871 AAA lid domain YZOS03_33600 PF10431 C-terminal, D2-small domain, of ClpB protein YZOS03_33600 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_33610 PF05638 Type VI secretion system effector, Hcp YZOS03_33620 PF04717 Type VI secretion system, phage-baseplate injector YZOS03_33680 PF00069 Protein kinase domain YZOS03_33710 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YZOS03_33730 PF05947 Type VI secretion system, TssF YZOS03_33750 PF01037 Lrp/AsnC ligand binding domain YZOS03_33810 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YZOS03_33890 PF07690 Major Facilitator Superfamily YZOS03_33910 PF03466 LysR substrate binding domain YZOS03_33910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_33920 PF00106 short chain dehydrogenase YZOS03_33930 PF00582 Universal stress protein family YZOS03_33950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YZOS03_33950 PF00361 Proton-conducting membrane transporter YZOS03_33950 PF13244 Domain of unknown function (DUF4040) YZOS03_33950 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter YZOS03_33960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YZOS03_33970 PF00361 Proton-conducting membrane transporter YZOS03_33980 PF01899 Na+/H+ ion antiporter subunit YZOS03_33990 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) YZOS03_34000 PF03334 Na+/H+ antiporter subunit YZOS03_34010 PF07702 UTRA domain YZOS03_34010 PF00392 Bacterial regulatory proteins, gntR family YZOS03_34020 PF11975 Family 4 glycosyl hydrolase C-terminal domain YZOS03_34020 PF02056 Family 4 glycosyl hydrolase YZOS03_34030 PF00367 phosphotransferase system, EIIB YZOS03_34030 PF02378 Phosphotransferase system, EIIC YZOS03_34040 PF00501 AMP-binding enzyme YZOS03_34040 PF13193 AMP-binding enzyme C-terminal domain YZOS03_34050 PF01012 Electron transfer flavoprotein domain YZOS03_34050 PF00766 Electron transfer flavoprotein FAD-binding domain YZOS03_34060 PF01012 Electron transfer flavoprotein domain YZOS03_34080 PF00005 ABC transporter YZOS03_34080 PF12399 Branched-chain amino acid ATP-binding cassette transporter YZOS03_34090 PF00501 AMP-binding enzyme YZOS03_34130 PF00005 ABC transporter YZOS03_34140 PF00501 AMP-binding enzyme YZOS03_34140 PF14535 AMP-binding enzyme C-terminal domain YZOS03_34150 PF05724 Thiopurine S-methyltransferase (TPMT) YZOS03_34200 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_34220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YZOS03_34220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YZOS03_34220 PF00205 Thiamine pyrophosphate enzyme, central domain YZOS03_34230 PF03306 Alpha-acetolactate decarboxylase YZOS03_34240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_34240 PF03466 LysR substrate binding domain YZOS03_34260 PF13195 Protein of unknown function (DUF4011) YZOS03_34260 PF13087 AAA domain YZOS03_34260 PF13086 AAA domain YZOS03_34270 PF13195 Protein of unknown function (DUF4011) YZOS03_34270 PF13087 AAA domain YZOS03_34270 PF13086 AAA domain YZOS03_34290 PF02567 Phenazine biosynthesis-like protein YZOS03_34300 PF02322 Cytochrome bd terminal oxidase subunit II YZOS03_34310 PF01654 Cytochrome bd terminal oxidase subunit I YZOS03_34320 PF00155 Aminotransferase class I and II YZOS03_34320 PF00392 Bacterial regulatory proteins, gntR family YZOS03_34330 PF14602 Hexapeptide repeat of succinyl-transferase YZOS03_34330 PF12464 Maltose acetyltransferase YZOS03_34340 PF12795 Mechanosensitive ion channel porin domain YZOS03_34340 PF12794 Mechanosensitive ion channel inner membrane domain 1 YZOS03_34340 PF00924 Mechanosensitive ion channel YZOS03_34360 PF00682 HMGL-like YZOS03_34370 PF18140 Propionyl-coenzyme A carboxylase BT domain YZOS03_34370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YZOS03_34370 PF00289 Biotin carboxylase, N-terminal domain YZOS03_34370 PF02785 Biotin carboxylase C-terminal domain YZOS03_34370 PF00364 Biotin-requiring enzyme YZOS03_34380 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_34390 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_34400 PF01039 Carboxyl transferase domain YZOS03_34410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_34410 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_34410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_34420 PF00376 MerR family regulatory protein YZOS03_34420 PF09278 MerR, DNA binding YZOS03_34430 PF02803 Thiolase, C-terminal domain YZOS03_34430 PF00108 Thiolase, N-terminal domain YZOS03_34440 PF00171 Aldehyde dehydrogenase family YZOS03_34450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_34450 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_34450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_34460 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_34480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YZOS03_34480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YZOS03_34500 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_34500 PF00072 Response regulator receiver domain YZOS03_34510 PF13977 BetI-type transcriptional repressor, C-terminal YZOS03_34510 PF00440 Bacterial regulatory proteins, tetR family YZOS03_34520 PF00171 Aldehyde dehydrogenase family YZOS03_34530 PF05199 GMC oxidoreductase YZOS03_34530 PF00732 GMC oxidoreductase YZOS03_34540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YZOS03_34550 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_34560 PF00005 ABC transporter YZOS03_34560 PF00571 CBS domain YZOS03_34570 PF00881 Nitroreductase family YZOS03_34590 PF16200 C-terminal region of band_7 YZOS03_34590 PF01145 SPFH domain / Band 7 family YZOS03_34610 PF03150 Di-haem cytochrome c peroxidase YZOS03_34610 PF00034 Cytochrome c YZOS03_34620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_34620 PF00072 Response regulator receiver domain YZOS03_34620 PF09308 LuxQ, periplasmic YZOS03_34620 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_34640 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YZOS03_34640 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YZOS03_34650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YZOS03_34650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YZOS03_34680 PF04116 Fatty acid hydroxylase superfamily YZOS03_34740 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_34740 PF00563 EAL domain YZOS03_34750 PF05025 RbsD / FucU transport protein family YZOS03_34760 PF00005 ABC transporter YZOS03_34770 PF02653 Branched-chain amino acid transport system / permease component YZOS03_34780 PF13407 Periplasmic binding protein domain YZOS03_34790 PF00294 pfkB family carbohydrate kinase YZOS03_34800 PF00356 Bacterial regulatory proteins, lacI family YZOS03_34820 PF04973 Nicotinamide mononucleotide transporter YZOS03_34830 PF01048 Phosphorylase superfamily YZOS03_34850 PF01497 Periplasmic binding protein YZOS03_34860 PF01032 FecCD transport family YZOS03_34870 PF01032 FecCD transport family YZOS03_34880 PF00005 ABC transporter YZOS03_34890 PF13411 MerR HTH family regulatory protein YZOS03_34910 PF00593 TonB dependent receptor YZOS03_34910 PF07715 TonB-dependent Receptor Plug Domain YZOS03_34970 PF12805 FUSC-like inner membrane protein yccS YZOS03_34980 PF12462 DNA helicase IV / RNA helicase N terminal YZOS03_34980 PF00580 UvrD/REP helicase N-terminal domain YZOS03_34980 PF13361 UvrD-like helicase C-terminal domain YZOS03_34990 PF02142 MGS-like domain YZOS03_35000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YZOS03_35010 PF00072 Response regulator receiver domain YZOS03_35010 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_35010 PF01627 Hpt domain YZOS03_35010 PF00672 HAMP domain YZOS03_35010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_35040 PF00486 Transcriptional regulatory protein, C terminal YZOS03_35040 PF00072 Response regulator receiver domain YZOS03_35050 PF00884 Sulfatase YZOS03_35060 PF03466 LysR substrate binding domain YZOS03_35060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_35070 PF16385 Domain of unknown function YZOS03_35070 PF00884 Sulfatase YZOS03_35080 PF13186 Iron-sulfur cluster-binding domain YZOS03_35080 PF04055 Radical SAM superfamily YZOS03_35090 PF07726 ATPase family associated with various cellular activities (AAA) YZOS03_35090 PF17863 AAA lid domain YZOS03_35120 PF00092 von Willebrand factor type A domain YZOS03_35160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YZOS03_35170 PF03466 LysR substrate binding domain YZOS03_35170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_35180 PF00781 Diacylglycerol kinase catalytic domain YZOS03_35190 PF04076 Bacterial OB fold (BOF) protein YZOS03_35210 PF18081 Fanconi anemia-associated nuclease SAP domain YZOS03_35210 PF08774 VRR-NUC domain YZOS03_35240 PF03606 C4-dicarboxylate anaerobic carrier YZOS03_35270 PF00814 Glycoprotease family YZOS03_35270 PF00583 Acetyltransferase (GNAT) family YZOS03_35290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_35290 PF00072 Response regulator receiver domain YZOS03_35300 PF00072 Response regulator receiver domain YZOS03_35300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_35310 PF00155 Aminotransferase class I and II YZOS03_35320 PF01926 50S ribosome-binding GTPase YZOS03_35330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_35330 PF00072 Response regulator receiver domain YZOS03_35330 PF09456 RcsC Alpha-Beta-Loop (ABL) YZOS03_35330 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_35340 PF13188 PAS domain YZOS03_35340 PF03707 Bacterial signalling protein N terminal repeat YZOS03_35340 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_35340 PF00563 EAL domain YZOS03_35350 PF00196 Bacterial regulatory proteins, luxR family YZOS03_35350 PF00072 Response regulator receiver domain YZOS03_35360 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_35380 PF00196 Bacterial regulatory proteins, luxR family YZOS03_35380 PF00072 Response regulator receiver domain YZOS03_35390 PF01584 CheW-like domain YZOS03_35390 PF00072 Response regulator receiver domain YZOS03_35400 PF08334 Type II secretion system (T2SS), protein G YZOS03_35400 PF07963 Prokaryotic N-terminal methylation motif YZOS03_35420 PF00892 EamA-like transporter family YZOS03_35460 PF00893 Small Multidrug Resistance protein YZOS03_35470 PF00892 EamA-like transporter family YZOS03_35500 PF00171 Aldehyde dehydrogenase family YZOS03_35520 PF13187 4Fe-4S dicluster domain YZOS03_35520 PF01645 Conserved region in glutamate synthase YZOS03_35530 PF00141 Peroxidase YZOS03_35540 PF09722 Protein of unknown function (DUF2384) YZOS03_35560 PF01757 Acyltransferase family YZOS03_35580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YZOS03_35590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_35630 PF03448 MgtE intracellular N domain YZOS03_35630 PF01769 Divalent cation transporter YZOS03_35630 PF00571 CBS domain YZOS03_35680 PF01327 Polypeptide deformylase YZOS03_35690 PF09278 MerR, DNA binding YZOS03_35690 PF00376 MerR family regulatory protein YZOS03_35710 PF02253 Phospholipase A1 YZOS03_35750 PF00664 ABC transporter transmembrane region YZOS03_35750 PF00005 ABC transporter YZOS03_35760 PF11490 DNA polymerase III polC-type N-terminus II YZOS03_35760 PF07733 Bacterial DNA polymerase III alpha NTPase domain YZOS03_35760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YZOS03_35760 PF14579 Helix-hairpin-helix motif YZOS03_35760 PF02811 PHP domain YZOS03_35760 PF00929 Exonuclease YZOS03_35850 PF12833 Helix-turn-helix domain YZOS03_35860 PF02627 Carboxymuconolactone decarboxylase family YZOS03_35870 PF00892 EamA-like transporter family YZOS03_35890 PF03466 LysR substrate binding domain YZOS03_35890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_35900 PF16123 Hydroxyacylglutathione hydrolase C-terminus YZOS03_35900 PF00753 Metallo-beta-lactamase superfamily YZOS03_35910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_35920 PF02347 Glycine cleavage system P-protein YZOS03_35930 PF01597 Glycine cleavage H-protein YZOS03_35940 PF00464 Serine hydroxymethyltransferase YZOS03_35960 PF01571 Aminomethyltransferase folate-binding domain YZOS03_35960 PF08669 Glycine cleavage T-protein C-terminal barrel domain YZOS03_36000 PF00873 AcrB/AcrD/AcrF family YZOS03_36020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YZOS03_36020 PF02378 Phosphotransferase system, EIIC YZOS03_36030 PF00294 pfkB family carbohydrate kinase YZOS03_36040 PF00381 PTS HPr component phosphorylation site YZOS03_36040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YZOS03_36050 PF00356 Bacterial regulatory proteins, lacI family YZOS03_36050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YZOS03_36080 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_36080 PF00989 PAS fold YZOS03_36080 PF01590 GAF domain YZOS03_36080 PF00563 EAL domain YZOS03_36090 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_36100 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_36110 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_36120 PF00005 ABC transporter YZOS03_36130 PF00465 Iron-containing alcohol dehydrogenase YZOS03_36140 PF06719 AraC-type transcriptional regulator N-terminus YZOS03_36140 PF12833 Helix-turn-helix domain YZOS03_36150 PF06483 Chitinase C YZOS03_36150 PF00704 Glycosyl hydrolases family 18 YZOS03_36160 PF00483 Nucleotidyl transferase YZOS03_36170 PF01268 Formate--tetrahydrofolate ligase YZOS03_36180 PF00294 pfkB family carbohydrate kinase YZOS03_36210 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_36220 PF12729 Four helix bundle sensory module for signal transduction YZOS03_36220 PF00672 HAMP domain YZOS03_36220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_36250 PF00271 Helicase conserved C-terminal domain YZOS03_36250 PF00270 DEAD/DEAH box helicase YZOS03_36290 PF01292 Prokaryotic cytochrome b561 YZOS03_36300 PF04264 YceI-like domain YZOS03_36310 PF01226 Formate/nitrite transporter YZOS03_36330 PF03466 LysR substrate binding domain YZOS03_36330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_36340 PF06496 Protein of unknown function (DUF1097) YZOS03_36350 PF11398 Protein of unknown function (DUF2813) YZOS03_36360 PF02872 5'-nucleotidase, C-terminal domain YZOS03_36360 PF00149 Calcineurin-like phosphoesterase YZOS03_36370 PF03741 Integral membrane protein TerC family YZOS03_36410 PF12262 Bacterial virulence factor lipase N-terminal YZOS03_36420 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YZOS03_36450 PF03061 Thioesterase superfamily YZOS03_36470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_36470 PF12793 Sugar transport-related sRNA regulator N-term YZOS03_36520 PF00684 DnaJ central domain YZOS03_36520 PF00226 DnaJ domain YZOS03_36520 PF01556 DnaJ C terminal domain YZOS03_36540 PF00563 EAL domain YZOS03_36540 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_36540 PF03707 Bacterial signalling protein N terminal repeat YZOS03_36540 PF13188 PAS domain YZOS03_36550 PF12241 Trans-2-enoyl-CoA reductase catalytic region YZOS03_36550 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YZOS03_36550 PF07055 Enoyl reductase FAD binding domain YZOS03_36560 PF13472 GDSL-like Lipase/Acylhydrolase family YZOS03_36570 PF00005 ABC transporter YZOS03_36600 PF02626 Carboxyltransferase domain, subdomain A and B YZOS03_36610 PF02682 Carboxyltransferase domain, subdomain C and D YZOS03_36620 PF03746 LamB/YcsF family YZOS03_36640 PF13426 PAS domain YZOS03_36640 PF08448 PAS fold YZOS03_36640 PF05231 MASE1 YZOS03_36640 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_36640 PF08447 PAS fold YZOS03_36640 PF00563 EAL domain YZOS03_36650 PF16363 GDP-mannose 4,6 dehydratase YZOS03_36660 PF07715 TonB-dependent Receptor Plug Domain YZOS03_36660 PF00593 TonB dependent receptor YZOS03_36660 PF04886 PT repeat YZOS03_36670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_36670 PF03466 LysR substrate binding domain YZOS03_36680 PF13607 Succinyl-CoA ligase like flavodoxin domain YZOS03_36680 PF13380 CoA binding domain YZOS03_36680 PF00583 Acetyltransferase (GNAT) family YZOS03_36700 PF05036 Sporulation related domain YZOS03_36710 PF01820 D-ala D-ala ligase N-terminus YZOS03_36710 PF07478 D-ala D-ala ligase C-terminus YZOS03_36730 PF01253 Translation initiation factor SUI1 YZOS03_37030 PF05707 Zonular occludens toxin (Zot) YZOS03_37050 PF01906 Putative heavy-metal-binding YZOS03_37130 PF03466 LysR substrate binding domain YZOS03_37130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_37150 PF00582 Universal stress protein family YZOS03_37160 PF03701 Uncharacterised protein family (UPF0181) YZOS03_37190 PF00486 Transcriptional regulatory protein, C terminal YZOS03_37190 PF00072 Response regulator receiver domain YZOS03_37210 PF02233 NAD(P) transhydrogenase beta subunit YZOS03_37220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YZOS03_37220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YZOS03_37220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YZOS03_37250 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_37260 PF00563 EAL domain YZOS03_37260 PF01590 GAF domain YZOS03_37260 PF00360 Phytochrome region YZOS03_37260 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_37280 PF00005 ABC transporter YZOS03_37280 PF03459 TOBE domain YZOS03_37290 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_37310 PF07685 CobB/CobQ-like glutamine amidotransferase domain YZOS03_37310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YZOS03_37320 PF04076 Bacterial OB fold (BOF) protein YZOS03_37340 PF08443 RimK-like ATP-grasp domain YZOS03_37340 PF18030 RimK PreATP-grasp domain YZOS03_37350 PF00155 Aminotransferase class I and II YZOS03_37360 PF12852 Cupin YZOS03_37360 PF12833 Helix-turn-helix domain YZOS03_37370 PF01554 MatE YZOS03_37390 PF03477 ATP cone domain YZOS03_37390 PF13597 Anaerobic ribonucleoside-triphosphate reductase YZOS03_37420 PF04143 Sulphur transport YZOS03_37440 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_37440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YZOS03_37450 PF01177 Asp/Glu/Hydantoin racemase YZOS03_37460 PF02567 Phenazine biosynthesis-like protein YZOS03_37490 PF00384 Molybdopterin oxidoreductase YZOS03_37500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_37500 PF03466 LysR substrate binding domain YZOS03_37510 PF02634 FdhD/NarQ family YZOS03_37520 PF07690 Major Facilitator Superfamily YZOS03_37530 PF00072 Response regulator receiver domain YZOS03_37530 PF00196 Bacterial regulatory proteins, luxR family YZOS03_37540 PF07730 Histidine kinase YZOS03_37540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_37540 PF05231 MASE1 YZOS03_37550 PF07690 Major Facilitator Superfamily YZOS03_37560 PF01238 Phosphomannose isomerase type I YZOS03_37600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YZOS03_37600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YZOS03_37610 PF00085 Thioredoxin YZOS03_37620 PF07690 Major Facilitator Superfamily YZOS03_37630 PF11756 Nitrous oxide-stimulated promoter YZOS03_37640 PF13302 Acetyltransferase (GNAT) domain YZOS03_37660 PF00593 TonB dependent receptor YZOS03_37660 PF07715 TonB-dependent Receptor Plug Domain YZOS03_37680 PF03605 Anaerobic c4-dicarboxylate membrane transporter YZOS03_37710 PF10414 Sirohaem synthase dimerisation region YZOS03_37710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YZOS03_37710 PF14824 Sirohaem biosynthesis protein central YZOS03_37720 PF01226 Formate/nitrite transporter YZOS03_37730 PF13806 Rieske-like [2Fe-2S] domain YZOS03_37740 PF18267 Rubredoxin NAD+ reductase C-terminal domain YZOS03_37740 PF04324 BFD-like [2Fe-2S] binding domain YZOS03_37740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YZOS03_37740 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_37740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YZOS03_37750 PF04324 BFD-like [2Fe-2S] binding domain YZOS03_37750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YZOS03_37750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YZOS03_37750 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_37750 PF18267 Rubredoxin NAD+ reductase C-terminal domain YZOS03_37760 PF14760 Rnk N-terminus YZOS03_37760 PF01272 Transcription elongation factor, GreA/GreB, C-term YZOS03_37770 PF13426 PAS domain YZOS03_37770 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_37770 PF00563 EAL domain YZOS03_37790 PF03707 Bacterial signalling protein N terminal repeat YZOS03_37790 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_37790 PF00563 EAL domain YZOS03_37800 PF00296 Luciferase-like monooxygenase YZOS03_37830 PF00128 Alpha amylase, catalytic domain YZOS03_37830 PF09154 Domain of unknown function (DUF1939) YZOS03_37840 PF00672 HAMP domain YZOS03_37840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_37850 PF00842 Alanine racemase, C-terminal domain YZOS03_37850 PF01168 Alanine racemase, N-terminal domain YZOS03_37880 PF01565 FAD binding domain YZOS03_37880 PF09330 D-lactate dehydrogenase, membrane binding YZOS03_37890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_37890 PF03466 LysR substrate binding domain YZOS03_37910 PF05762 VWA domain containing CoxE-like protein YZOS03_37920 PF07728 AAA domain (dynein-related subfamily) YZOS03_37920 PF17868 AAA lid domain YZOS03_37920 PF12592 Protein of unknown function (DUF3763) YZOS03_37940 PF01212 Beta-eliminating lyase YZOS03_37960 PF03606 C4-dicarboxylate anaerobic carrier YZOS03_37980 PF08212 Lipocalin-like domain YZOS03_38000 PF13476 AAA domain YZOS03_38010 PF12320 Type 5 capsule protein repressor C-terminal domain YZOS03_38010 PF00149 Calcineurin-like phosphoesterase YZOS03_38040 PF06715 Gp5 C-terminal repeat (3 copies) YZOS03_38040 PF04717 Type VI secretion system, phage-baseplate injector YZOS03_38060 PF00004 ATPase family associated with various cellular activities (AAA) YZOS03_38060 PF10431 C-terminal, D2-small domain, of ClpB protein YZOS03_38060 PF07724 AAA domain (Cdc48 subfamily) YZOS03_38060 PF17871 AAA lid domain YZOS03_38080 PF05947 Type VI secretion system, TssF YZOS03_38110 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YZOS03_38120 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YZOS03_38130 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YZOS03_38140 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 YZOS03_38180 PF06744 Type VI secretion protein IcmF C-terminal YZOS03_38180 PF06761 Intracellular multiplication and human macrophage-killing YZOS03_38180 PF14331 ImcF-related N-terminal domain YZOS03_38190 PF13677 Membrane MotB of proton-channel complex MotA/MotB YZOS03_38190 PF00691 OmpA family YZOS03_38230 PF00069 Protein kinase domain YZOS03_38230 PF03793 PASTA domain YZOS03_38270 PF00072 Response regulator receiver domain YZOS03_38270 PF00211 Adenylate and Guanylate cyclase catalytic domain YZOS03_38330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YZOS03_38330 PF04324 BFD-like [2Fe-2S] binding domain YZOS03_38330 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_38330 PF18267 Rubredoxin NAD+ reductase C-terminal domain YZOS03_38330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YZOS03_38330 PF13806 Rieske-like [2Fe-2S] domain YZOS03_38340 PF00005 ABC transporter YZOS03_38350 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_38360 PF00005 ABC transporter YZOS03_38380 PF03861 ANTAR domain YZOS03_38380 PF00072 Response regulator receiver domain YZOS03_38390 PF01738 Dienelactone hydrolase family YZOS03_38400 PF00591 Glycosyl transferase family, a/b domain YZOS03_38400 PF02885 Glycosyl transferase family, helical bundle domain YZOS03_38410 PF10414 Sirohaem synthase dimerisation region YZOS03_38410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YZOS03_38410 PF14824 Sirohaem biosynthesis protein central YZOS03_38420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YZOS03_38420 PF01568 Molydopterin dinucleotide binding domain YZOS03_38420 PF00384 Molybdopterin oxidoreductase YZOS03_38440 PF03222 Tryptophan/tyrosine permease family YZOS03_38450 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_38470 PF00082 Subtilase family YZOS03_38470 PF01483 Proprotein convertase P-domain YZOS03_38510 PF00072 Response regulator receiver domain YZOS03_38510 PF00486 Transcriptional regulatory protein, C terminal YZOS03_38560 PF04314 Copper chaperone PCu(A)C YZOS03_38580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YZOS03_38580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YZOS03_38600 PF01081 KDPG and KHG aldolase YZOS03_38610 PF00294 pfkB family carbohydrate kinase YZOS03_38620 PF07883 Cupin domain YZOS03_38630 PF07940 Heparinase II/III-like protein YZOS03_38630 PF05426 Alginate lyase YZOS03_38640 PF07940 Heparinase II/III-like protein YZOS03_38640 PF05426 Alginate lyase YZOS03_38650 PF08787 Alginate lyase YZOS03_38660 PF08787 Alginate lyase YZOS03_38690 PF08787 Alginate lyase YZOS03_38710 PF07729 FCD domain YZOS03_38710 PF00392 Bacterial regulatory proteins, gntR family YZOS03_38720 PF00392 Bacterial regulatory proteins, gntR family YZOS03_38720 PF07729 FCD domain YZOS03_38730 PF00571 CBS domain YZOS03_38740 PF00929 Exonuclease YZOS03_38740 PF02811 PHP domain YZOS03_38740 PF14579 Helix-hairpin-helix motif YZOS03_38740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YZOS03_38740 PF07733 Bacterial DNA polymerase III alpha NTPase domain YZOS03_38740 PF11490 DNA polymerase III polC-type N-terminus II YZOS03_38750 PF00474 Sodium:solute symporter family YZOS03_38780 PF00676 Dehydrogenase E1 component YZOS03_38790 PF02779 Transketolase, pyrimidine binding domain YZOS03_38790 PF02780 Transketolase, C-terminal domain YZOS03_38800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YZOS03_38800 PF00364 Biotin-requiring enzyme YZOS03_38800 PF02817 e3 binding domain YZOS03_38810 PF00766 Electron transfer flavoprotein FAD-binding domain YZOS03_38810 PF01012 Electron transfer flavoprotein domain YZOS03_38830 PF03466 LysR substrate binding domain YZOS03_38830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_38860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_38860 PF03466 LysR substrate binding domain YZOS03_38880 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_38890 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_38900 PF00497 Bacterial extracellular solute-binding proteins, family 3 YZOS03_38910 PF00005 ABC transporter YZOS03_38970 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_38990 PF00171 Aldehyde dehydrogenase family YZOS03_39020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YZOS03_39020 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_39030 PF01040 UbiA prenyltransferase family YZOS03_39050 PF00510 Cytochrome c oxidase subunit III YZOS03_39060 PF00115 Cytochrome C and Quinol oxidase polypeptide I YZOS03_39070 PF06481 COX Aromatic Rich Motif YZOS03_39070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YZOS03_39090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YZOS03_39090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YZOS03_39100 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_39110 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_39120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_39120 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_39120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_39130 PF00171 Aldehyde dehydrogenase family YZOS03_39140 PF02803 Thiolase, C-terminal domain YZOS03_39140 PF00108 Thiolase, N-terminal domain YZOS03_39150 PF00376 MerR family regulatory protein YZOS03_39150 PF09278 MerR, DNA binding YZOS03_39170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_39170 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_39170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_39180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YZOS03_39180 PF02770 Acyl-CoA dehydrogenase, middle domain YZOS03_39180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YZOS03_39190 PF01039 Carboxyl transferase domain YZOS03_39200 PF00378 Enoyl-CoA hydratase/isomerase YZOS03_39210 PF00682 HMGL-like YZOS03_39230 PF13183 4Fe-4S dicluster domain YZOS03_39230 PF01565 FAD binding domain YZOS03_39230 PF02913 FAD linked oxidases, C-terminal domain YZOS03_39240 PF04909 Amidohydrolase YZOS03_39250 PF00561 alpha/beta hydrolase fold YZOS03_39260 PF12833 Helix-turn-helix domain YZOS03_39260 PF01965 DJ-1/PfpI family YZOS03_39280 PF00795 Carbon-nitrogen hydrolase YZOS03_39290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YZOS03_39300 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_39310 PF00005 ABC transporter YZOS03_39310 PF00571 CBS domain YZOS03_39320 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_39330 PF13426 PAS domain YZOS03_39330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_39330 PF08447 PAS fold YZOS03_39350 PF01914 MarC family integral membrane protein YZOS03_39360 PF01258 Prokaryotic dksA/traR C4-type zinc finger YZOS03_39370 PF02492 CobW/HypB/UreG, nucleotide-binding domain YZOS03_39370 PF07683 Cobalamin synthesis protein cobW C-terminal domain YZOS03_39380 PF07683 Cobalamin synthesis protein cobW C-terminal domain YZOS03_39380 PF02492 CobW/HypB/UreG, nucleotide-binding domain YZOS03_39400 PF01476 LysM domain YZOS03_39400 PF08525 Opacity-associated protein A N-terminal motif YZOS03_39400 PF01551 Peptidase family M23 YZOS03_39410 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YZOS03_39420 PF07683 Cobalamin synthesis protein cobW C-terminal domain YZOS03_39420 PF02492 CobW/HypB/UreG, nucleotide-binding domain YZOS03_39430 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_39440 PF01979 Amidohydrolase family YZOS03_39480 PF01925 Sulfite exporter TauE/SafE YZOS03_39520 PF12146 Serine aminopeptidase, S33 YZOS03_39530 PF12146 Serine aminopeptidase, S33 YZOS03_39540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_39540 PF03466 LysR substrate binding domain YZOS03_39550 PF00871 Acetokinase family YZOS03_39570 PF00270 DEAD/DEAH box helicase YZOS03_39570 PF03880 DbpA RNA binding domain YZOS03_39570 PF00271 Helicase conserved C-terminal domain YZOS03_39580 PF08206 Ribonuclease B OB domain YZOS03_39580 PF00575 S1 RNA binding domain YZOS03_39580 PF00773 RNB domain YZOS03_39590 PF12833 Helix-turn-helix domain YZOS03_39610 PF12849 PBP superfamily domain YZOS03_39620 PF01575 MaoC like domain YZOS03_39630 PF12729 Four helix bundle sensory module for signal transduction YZOS03_39630 PF00672 HAMP domain YZOS03_39630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_39640 PF00005 ABC transporter YZOS03_39650 PF00563 EAL domain YZOS03_39650 PF12792 CSS motif domain associated with EAL YZOS03_39690 PF00271 Helicase conserved C-terminal domain YZOS03_39690 PF00270 DEAD/DEAH box helicase YZOS03_39700 PF07683 Cobalamin synthesis protein cobW C-terminal domain YZOS03_39700 PF02492 CobW/HypB/UreG, nucleotide-binding domain YZOS03_39720 PF01470 Pyroglutamyl peptidase YZOS03_39740 PF00313 'Cold-shock' DNA-binding domain YZOS03_39760 PF00291 Pyridoxal-phosphate dependent enzyme YZOS03_39780 PF09905 DNA-binding protein VF530 YZOS03_39790 PF00271 Helicase conserved C-terminal domain YZOS03_39790 PF00270 DEAD/DEAH box helicase YZOS03_39840 PF12843 Putative quorum-sensing-regulated virulence factor YZOS03_39880 PF01329 Pterin 4 alpha carbinolamine dehydratase YZOS03_39890 PF00351 Biopterin-dependent aromatic amino acid hydroxylase YZOS03_39900 PF00501 AMP-binding enzyme YZOS03_39900 PF13193 AMP-binding enzyme C-terminal domain YZOS03_39920 PF03466 LysR substrate binding domain YZOS03_39920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_39940 PF00892 EamA-like transporter family YZOS03_39970 PF00465 Iron-containing alcohol dehydrogenase YZOS03_39980 PF07995 Glucose / Sorbosone dehydrogenase YZOS03_40000 PF00210 Ferritin-like domain YZOS03_40010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_40010 PF00672 HAMP domain YZOS03_40010 PF12729 Four helix bundle sensory module for signal transduction YZOS03_40050 PF13533 Biotin-lipoyl like YZOS03_40060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_40060 PF00072 Response regulator receiver domain YZOS03_40070 PF02321 Outer membrane efflux protein YZOS03_40080 PF00664 ABC transporter transmembrane region YZOS03_40080 PF00005 ABC transporter YZOS03_40090 PF00005 ABC transporter YZOS03_40090 PF00664 ABC transporter transmembrane region YZOS03_40110 PF04545 Sigma-70, region 4 YZOS03_40110 PF04539 Sigma-70 region 3 YZOS03_40110 PF04542 Sigma-70 region 2 YZOS03_40110 PF00140 Sigma-70 factor, region 1.2 YZOS03_40120 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_40130 PF03889 Alternative ribosome-rescue factor A YZOS03_40140 PF00313 'Cold-shock' DNA-binding domain YZOS03_40180 PF05736 OprF membrane domain YZOS03_40180 PF00691 OmpA family YZOS03_40200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YZOS03_40200 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YZOS03_40210 PF01040 UbiA prenyltransferase family YZOS03_40220 PF02628 Cytochrome oxidase assembly protein YZOS03_40260 PF00510 Cytochrome c oxidase subunit III YZOS03_40270 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 YZOS03_40280 PF00115 Cytochrome C and Quinol oxidase polypeptide I YZOS03_40290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain YZOS03_40290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YZOS03_40310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YZOS03_40310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YZOS03_40310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YZOS03_40310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YZOS03_40330 PF01810 LysE type translocator YZOS03_40370 PF01557 Fumarylacetoacetate (FAA) hydrolase family YZOS03_40410 PF00892 EamA-like transporter family YZOS03_40420 PF00462 Glutaredoxin YZOS03_40450 PF07690 Major Facilitator Superfamily YZOS03_40460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_40460 PF03466 LysR substrate binding domain YZOS03_40480 PF08448 PAS fold YZOS03_40480 PF08447 PAS fold YZOS03_40480 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_40480 PF00563 EAL domain YZOS03_40490 PF01476 LysM domain YZOS03_40490 PF08525 Opacity-associated protein A N-terminal motif YZOS03_40490 PF01551 Peptidase family M23 YZOS03_40530 PF07670 Nucleoside recognition YZOS03_40540 PF02743 Cache domain YZOS03_40540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_40540 PF00672 HAMP domain YZOS03_40560 PF03222 Tryptophan/tyrosine permease family YZOS03_40610 PF00248 Aldo/keto reductase family YZOS03_40620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_40620 PF03466 LysR substrate binding domain YZOS03_40660 PF01638 HxlR-like helix-turn-helix YZOS03_40690 PF01758 Sodium Bile acid symporter family YZOS03_40710 PF01161 Phosphatidylethanolamine-binding protein YZOS03_40720 PF01161 Phosphatidylethanolamine-binding protein YZOS03_40730 PF02567 Phenazine biosynthesis-like protein YZOS03_40750 PF00005 ABC transporter YZOS03_40780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YZOS03_40780 PF00384 Molybdopterin oxidoreductase YZOS03_40780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YZOS03_40780 PF12838 4Fe-4S dicluster domain YZOS03_40780 PF01568 Molydopterin dinucleotide binding domain YZOS03_40810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_40820 PF00873 AcrB/AcrD/AcrF family YZOS03_40850 PF17151 Periplasmic sensor domain YZOS03_40850 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_40870 PF13302 Acetyltransferase (GNAT) domain YZOS03_40890 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YZOS03_40900 PF00873 AcrB/AcrD/AcrF family YZOS03_40910 PF13533 Biotin-lipoyl like YZOS03_40930 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YZOS03_40930 PF00326 Prolyl oligopeptidase family YZOS03_40940 PF16326 ABC transporter C-terminal domain YZOS03_40940 PF00005 ABC transporter YZOS03_40940 PF12848 ABC transporter YZOS03_40950 PF00582 Universal stress protein family YZOS03_40960 PF02525 Flavodoxin-like fold YZOS03_40970 PF00999 Sodium/hydrogen exchanger family YZOS03_40970 PF02254 TrkA-N domain YZOS03_41000 PF00128 Alpha amylase, catalytic domain YZOS03_41010 PF13411 MerR HTH family regulatory protein YZOS03_41020 PF02627 Carboxymuconolactone decarboxylase family YZOS03_41040 PF01752 Collagenase YZOS03_41040 PF08453 Peptidase family M9 N-terminal YZOS03_41040 PF04151 Bacterial pre-peptidase C-terminal domain YZOS03_41060 PF17848 Acetyl-coA carboxylase zinc finger domain YZOS03_41060 PF01039 Carboxyl transferase domain YZOS03_41070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_41070 PF03466 LysR substrate binding domain YZOS03_41080 PF02743 Cache domain YZOS03_41080 PF00672 HAMP domain YZOS03_41080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_41090 PF03824 High-affinity nickel-transport protein YZOS03_41100 PF02583 Metal-sensitive transcriptional repressor YZOS03_41110 PF02447 GntP family permease YZOS03_41120 PF01370 NAD dependent epimerase/dehydratase family YZOS03_41130 PF01261 Xylose isomerase-like TIM barrel YZOS03_41140 PF00596 Class II Aldolase and Adducin N-terminal domain YZOS03_41150 PF17042 Nucleotide-binding C-terminal domain YZOS03_41150 PF07005 Sugar-binding N-terminal domain YZOS03_41160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YZOS03_41160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YZOS03_41170 PF00455 DeoR C terminal sensor domain YZOS03_41170 PF08220 DeoR-like helix-turn-helix domain YZOS03_41180 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_41200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_41210 PF00005 ABC transporter YZOS03_41210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_41220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_41220 PF00005 ABC transporter YZOS03_41230 PF01554 MatE YZOS03_41250 PF00072 Response regulator receiver domain YZOS03_41250 PF01584 CheW-like domain YZOS03_41270 PF01243 Pyridoxamine 5'-phosphate oxidase YZOS03_41280 PF06228 Haem utilisation ChuX/HutX YZOS03_41290 PF04055 Radical SAM superfamily YZOS03_41300 PF03544 Gram-negative bacterial TonB protein C-terminal YZOS03_41310 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_41320 PF02472 Biopolymer transport protein ExbD/TolR YZOS03_41340 PF01032 FecCD transport family YZOS03_41350 PF00005 ABC transporter YZOS03_41430 PF01467 Cytidylyltransferase-like YZOS03_41440 PF02540 NAD synthase YZOS03_41450 PF00111 2Fe-2S iron-sulfur cluster binding domain YZOS03_41450 PF03473 MOSC domain YZOS03_41450 PF03476 MOSC N-terminal beta barrel domain YZOS03_41450 PF03476 MOSC N-terminal beta barrel domain YZOS03_41450 PF00111 2Fe-2S iron-sulfur cluster binding domain YZOS03_41450 PF03473 MOSC domain YZOS03_41460 PF01679 Proteolipid membrane potential modulator YZOS03_41470 PF01979 Amidohydrolase family YZOS03_41480 PF05661 Protein of unknown function (DUF808) YZOS03_41540 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_41550 PF14785 Maltose transport system permease protein MalF P2 domain YZOS03_41550 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_41560 PF01547 Bacterial extracellular solute-binding protein YZOS03_41570 PF08402 TOBE domain YZOS03_41570 PF00005 ABC transporter YZOS03_41580 PF02397 Bacterial sugar transferase YZOS03_41610 PF13807 G-rich domain on putative tyrosine kinase YZOS03_41610 PF02706 Chain length determinant protein YZOS03_41610 PF13614 AAA domain YZOS03_41640 PF13439 Glycosyltransferase Family 4 YZOS03_41700 PF04266 ASCH domain YZOS03_41710 PF00440 Bacterial regulatory proteins, tetR family YZOS03_41710 PF16925 Tetracyclin repressor-like, C-terminal domain YZOS03_41720 PF00107 Zinc-binding dehydrogenase YZOS03_41720 PF16884 N-terminal domain of oxidoreductase YZOS03_41730 PF13417 Glutathione S-transferase, N-terminal domain YZOS03_41740 PF00199 Catalase YZOS03_41740 PF06628 Catalase-related immune-responsive YZOS03_41750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YZOS03_41750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YZOS03_41770 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_41770 PF18113 Rubredoxin binding C-terminal domain YZOS03_41780 PF00301 Rubredoxin YZOS03_41780 PF00258 Flavodoxin YZOS03_41780 PF00753 Metallo-beta-lactamase superfamily YZOS03_41790 PF01590 GAF domain YZOS03_41790 PF00158 Sigma-54 interaction domain YZOS03_41810 PF13419 Haloacid dehalogenase-like hydrolase YZOS03_41820 PF00127 Copper binding proteins, plastocyanin/azurin family YZOS03_41840 PF01266 FAD dependent oxidoreductase YZOS03_41850 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_41850 PF18113 Rubredoxin binding C-terminal domain YZOS03_41860 PF00171 Aldehyde dehydrogenase family YZOS03_41870 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YZOS03_41870 PF00355 Rieske [2Fe-2S] domain YZOS03_41880 PF02028 BCCT, betaine/carnitine/choline family transporter YZOS03_41890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_41890 PF03466 LysR substrate binding domain YZOS03_41900 PF02386 Cation transport protein YZOS03_41910 PF02080 TrkA-C domain YZOS03_41910 PF02254 TrkA-N domain YZOS03_41920 PF00072 Response regulator receiver domain YZOS03_41920 PF00486 Transcriptional regulatory protein, C terminal YZOS03_41930 PF02702 Osmosensitive K+ channel His kinase sensor domain YZOS03_41930 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_41930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_41930 PF13493 Domain of unknown function (DUF4118) YZOS03_41930 PF02702 Osmosensitive K+ channel His kinase sensor domain YZOS03_41930 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_41930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_41930 PF13493 Domain of unknown function (DUF4118) YZOS03_41940 PF00664 ABC transporter transmembrane region YZOS03_41940 PF00005 ABC transporter YZOS03_41950 PF07715 TonB-dependent Receptor Plug Domain YZOS03_41950 PF00593 TonB dependent receptor YZOS03_41960 PF00005 ABC transporter YZOS03_41970 PF01497 Periplasmic binding protein YZOS03_41980 PF01032 FecCD transport family YZOS03_42000 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_42010 PF00664 ABC transporter transmembrane region YZOS03_42010 PF00005 ABC transporter YZOS03_42020 PF00664 ABC transporter transmembrane region YZOS03_42020 PF00005 ABC transporter YZOS03_42040 PF00196 Bacterial regulatory proteins, luxR family YZOS03_42050 PF00196 Bacterial regulatory proteins, luxR family YZOS03_42070 PF02743 Cache domain YZOS03_42070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_42070 PF00672 HAMP domain YZOS03_42080 PF07726 ATPase family associated with various cellular activities (AAA) YZOS03_42080 PF17863 AAA lid domain YZOS03_42090 PF01882 Protein of unknown function DUF58 YZOS03_42100 PF13519 von Willebrand factor type A domain YZOS03_42110 PF13519 von Willebrand factor type A domain YZOS03_42140 PF00005 ABC transporter YZOS03_42150 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_42160 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_42170 PF12849 PBP superfamily domain YZOS03_42180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_42180 PF00672 HAMP domain YZOS03_42220 PF00593 TonB dependent receptor YZOS03_42220 PF07715 TonB-dependent Receptor Plug Domain YZOS03_42230 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YZOS03_42230 PF00326 Prolyl oligopeptidase family YZOS03_42240 PF00270 DEAD/DEAH box helicase YZOS03_42240 PF00271 Helicase conserved C-terminal domain YZOS03_42260 PF17969 L,D-transpeptidase C-terminal domain YZOS03_42260 PF01476 LysM domain YZOS03_42260 PF03734 L,D-transpeptidase catalytic domain YZOS03_42270 PF00875 DNA photolyase YZOS03_42270 PF03441 FAD binding domain of DNA photolyase YZOS03_42280 PF13411 MerR HTH family regulatory protein YZOS03_42290 PF08349 Protein of unknown function (DUF1722) YZOS03_42300 PF01048 Phosphorylase superfamily YZOS03_42350 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_42360 PF11742 Protein of unknown function (DUF3302) YZOS03_42370 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_42370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YZOS03_42380 PF07155 ECF-type riboflavin transporter, S component YZOS03_42390 PF12558 ATP-binding cassette cobalt transporter YZOS03_42390 PF00005 ABC transporter YZOS03_42430 PF13237 4Fe-4S dicluster domain YZOS03_42430 PF12801 4Fe-4S binding domain YZOS03_42440 PF12800 4Fe-4S binding domain YZOS03_42440 PF12838 4Fe-4S dicluster domain YZOS03_42450 PF00583 Acetyltransferase (GNAT) family YZOS03_42480 PF12945 Flagellar protein YcgR YZOS03_42480 PF07238 PilZ domain YZOS03_42490 PF13609 Gram-negative porin YZOS03_42500 PF00672 HAMP domain YZOS03_42500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_42500 PF12729 Four helix bundle sensory module for signal transduction YZOS03_42510 PF05362 Lon protease (S16) C-terminal proteolytic domain YZOS03_42510 PF13654 AAA domain YZOS03_42540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_42540 PF00005 ABC transporter YZOS03_42550 PF00326 Prolyl oligopeptidase family YZOS03_42550 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YZOS03_42560 PF03466 LysR substrate binding domain YZOS03_42560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_42570 PF02652 L-lactate permease YZOS03_42580 PF01070 FMN-dependent dehydrogenase YZOS03_42600 PF00924 Mechanosensitive ion channel YZOS03_42610 PF00194 Eukaryotic-type carbonic anhydrase YZOS03_42670 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_42670 PF00107 Zinc-binding dehydrogenase YZOS03_42680 PF00155 Aminotransferase class I and II YZOS03_42690 PF13188 PAS domain YZOS03_42690 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_42690 PF03707 Bacterial signalling protein N terminal repeat YZOS03_42690 PF00563 EAL domain YZOS03_42720 PF00080 Copper/zinc superoxide dismutase (SODC) YZOS03_42730 PF00072 Response regulator receiver domain YZOS03_42730 PF13426 PAS domain YZOS03_42730 PF08448 PAS fold YZOS03_42730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_42730 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_42740 PF00072 Response regulator receiver domain YZOS03_42740 PF00486 Transcriptional regulatory protein, C terminal YZOS03_42790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_42790 PF03466 LysR substrate binding domain YZOS03_42800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_42880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_42880 PF03466 LysR substrate binding domain YZOS03_42910 PF18269 T3SS EscN ATPase C-terminal domain YZOS03_42910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_42920 PF18269 T3SS EscN ATPase C-terminal domain YZOS03_42920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YZOS03_42940 PF14842 FliG N-terminal domain YZOS03_42940 PF14841 FliG middle domain YZOS03_42940 PF01706 FliG C-terminal domain YZOS03_42950 PF08345 Flagellar M-ring protein C-terminal YZOS03_42950 PF01514 Secretory protein of YscJ/FliF family YZOS03_42960 PF02049 Flagellar hook-basal body complex protein FliE YZOS03_42970 PF02954 Bacterial regulatory protein, Fis family YZOS03_42970 PF00072 Response regulator receiver domain YZOS03_42970 PF00158 Sigma-54 interaction domain YZOS03_43000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YZOS03_43010 PF00813 FliP family YZOS03_43020 PF01313 Bacterial export proteins, family 3 YZOS03_43030 PF01311 Bacterial export proteins, family 1 YZOS03_43040 PF01312 FlhB HrpN YscU SpaS Family YZOS03_43050 PF00771 FHIPEP family YZOS03_43070 PF00669 Bacterial flagellin N-terminal helical region YZOS03_43070 PF00700 Bacterial flagellin C-terminal helical region YZOS03_43090 PF07195 Flagellar hook-associated protein 2 C-terminus YZOS03_43090 PF02465 Flagellar hook-associated protein 2 N-terminus YZOS03_43090 PF07196 Flagellin hook IN motif YZOS03_43100 PF02561 Flagellar protein FliS YZOS03_43130 PF03748 Flagellar basal body-associated protein FliL YZOS03_43140 PF04542 Sigma-70 region 2 YZOS03_43140 PF04545 Sigma-70, region 4 YZOS03_43150 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_43160 PF13677 Membrane MotB of proton-channel complex MotA/MotB YZOS03_43160 PF00691 OmpA family YZOS03_43180 PF08000 Bacterial PH domain YZOS03_43220 PF02901 Pyruvate formate lyase-like YZOS03_43220 PF01228 Glycine radical YZOS03_43230 PF04055 Radical SAM superfamily YZOS03_43240 PF00923 Transaldolase/Fructose-6-phosphate aldolase YZOS03_43250 PF00923 Transaldolase/Fructose-6-phosphate aldolase YZOS03_43270 PF00672 HAMP domain YZOS03_43270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_43270 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_43280 PF00072 Response regulator receiver domain YZOS03_43280 PF00486 Transcriptional regulatory protein, C terminal YZOS03_43300 PF00583 Acetyltransferase (GNAT) family YZOS03_43320 PF07690 Major Facilitator Superfamily YZOS03_43330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_43330 PF03466 LysR substrate binding domain YZOS03_43340 PF00892 EamA-like transporter family YZOS03_43390 PF13533 Biotin-lipoyl like YZOS03_43410 PF01594 AI-2E family transporter YZOS03_43420 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) YZOS03_43440 PF00175 Oxidoreductase NAD-binding domain YZOS03_43440 PF00970 Oxidoreductase FAD-binding domain YZOS03_43460 PF09905 DNA-binding protein VF530 YZOS03_43470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_43470 PF03466 LysR substrate binding domain YZOS03_43490 PF00881 Nitroreductase family YZOS03_43500 PF12833 Helix-turn-helix domain YZOS03_43500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YZOS03_43510 PF00686 Starch binding domain YZOS03_43510 PF00128 Alpha amylase, catalytic domain YZOS03_43520 PF00768 D-alanyl-D-alanine carboxypeptidase YZOS03_43520 PF07943 Penicillin-binding protein 5, C-terminal domain YZOS03_43530 PF00561 alpha/beta hydrolase fold YZOS03_43540 PF17773 UPF0176 acylphosphatase like domain YZOS03_43540 PF00581 Rhodanese-like domain YZOS03_43560 PF00875 DNA photolyase YZOS03_43560 PF03441 FAD binding domain of DNA photolyase YZOS03_43570 PF02469 Fasciclin domain YZOS03_43580 PF18416 N-acetylglucosamine binding protein domain 2 YZOS03_43580 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YZOS03_43590 PF01734 Patatin-like phospholipase YZOS03_43600 PF01914 MarC family integral membrane protein YZOS03_43610 PF00881 Nitroreductase family YZOS03_43630 PF18412 Outer-membrane lipoprotein Wza C-terminal domain YZOS03_43630 PF02563 Polysaccharide biosynthesis/export protein YZOS03_43630 PF10531 SLBB domain YZOS03_43640 PF02563 Polysaccharide biosynthesis/export protein YZOS03_43640 PF10531 SLBB domain YZOS03_43640 PF18412 Outer-membrane lipoprotein Wza C-terminal domain YZOS03_43650 PF01451 Low molecular weight phosphotyrosine protein phosphatase YZOS03_43660 PF13807 G-rich domain on putative tyrosine kinase YZOS03_43660 PF02706 Chain length determinant protein YZOS03_43660 PF13614 AAA domain YZOS03_43680 PF08803 Putative mono-oxygenase ydhR YZOS03_43690 PF03466 LysR substrate binding domain YZOS03_43690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_43710 PF00375 Sodium:dicarboxylate symporter family YZOS03_43720 PF06803 Protein of unknown function (DUF1232) YZOS03_43730 PF01546 Peptidase family M20/M25/M40 YZOS03_43730 PF07687 Peptidase dimerisation domain YZOS03_43740 PF07670 Nucleoside recognition YZOS03_43750 PF07670 Nucleoside recognition YZOS03_43770 PF00128 Alpha amylase, catalytic domain YZOS03_43780 PF00912 Transglycosylase YZOS03_43790 PF02806 Alpha amylase, C-terminal all-beta domain YZOS03_43790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YZOS03_43790 PF00128 Alpha amylase, catalytic domain YZOS03_43800 PF02446 4-alpha-glucanotransferase YZOS03_43810 PF00343 Carbohydrate phosphorylase YZOS03_43820 PF00196 Bacterial regulatory proteins, luxR family YZOS03_43820 PF17874 MalT-like TPR region YZOS03_43850 PF02630 SCO1/SenC YZOS03_43860 PF00367 phosphotransferase system, EIIB YZOS03_43860 PF02378 Phosphotransferase system, EIIC YZOS03_43870 PF03193 RsgA GTPase YZOS03_43880 PF00375 Sodium:dicarboxylate symporter family YZOS03_43890 PF08543 Phosphomethylpyrimidine kinase YZOS03_43910 PF13520 Amino acid permease YZOS03_43920 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YZOS03_43920 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YZOS03_43920 PF01276 Orn/Lys/Arg decarboxylase, major domain YZOS03_43960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YZOS03_43960 PF11852 Domain of unknown function (DUF3372) YZOS03_43960 PF03714 Bacterial pullanase-associated domain YZOS03_43960 PF18494 Pullulanase Ins domain YZOS03_43960 PF17967 Pullulanase N2 domain YZOS03_43970 PF04231 Endonuclease I YZOS03_43980 PF00128 Alpha amylase, catalytic domain YZOS03_43980 PF02903 Alpha amylase, N-terminal ig-like domain YZOS03_43980 PF16657 Maltogenic Amylase, C-terminal domain YZOS03_44010 PF02264 LamB porin YZOS03_44020 PF00128 Alpha amylase, catalytic domain YZOS03_44020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YZOS03_44030 PF03313 Serine dehydratase alpha chain YZOS03_44030 PF03315 Serine dehydratase beta chain YZOS03_44040 PF03313 Serine dehydratase alpha chain YZOS03_44040 PF03315 Serine dehydratase beta chain YZOS03_44050 PF00474 Sodium:solute symporter family YZOS03_44100 PF12697 Alpha/beta hydrolase family YZOS03_44130 PF00815 Histidinol dehydrogenase YZOS03_44140 PF03328 HpcH/HpaI aldolase/citrate lyase family YZOS03_44150 PF00356 Bacterial regulatory proteins, lacI family YZOS03_44160 PF03480 Bacterial extracellular solute-binding protein, family 7 YZOS03_44180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YZOS03_44180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component YZOS03_44210 PF00474 Sodium:solute symporter family YZOS03_44220 PF00356 Bacterial regulatory proteins, lacI family YZOS03_44230 PF02796 Helix-turn-helix domain of resolvase YZOS03_44230 PF00239 Resolvase, N terminal domain YZOS03_44240 PF07690 Major Facilitator Superfamily YZOS03_44270 PF01551 Peptidase family M23 YZOS03_44270 PF04225 Opacity-associated protein A LysM-like domain YZOS03_44290 PF00675 Insulinase (Peptidase family M16) YZOS03_44290 PF05193 Peptidase M16 inactive domain YZOS03_44300 PF17200 Single Cache domain 2 YZOS03_44300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_44300 PF00672 HAMP domain YZOS03_44310 PF00005 ABC transporter YZOS03_44320 PF01032 FecCD transport family YZOS03_44330 PF01032 FecCD transport family YZOS03_44340 PF01497 Periplasmic binding protein YZOS03_44350 PF00593 TonB dependent receptor YZOS03_44350 PF07660 Secretin and TonB N terminus short domain YZOS03_44350 PF07715 TonB-dependent Receptor Plug Domain YZOS03_44360 PF00593 TonB dependent receptor YZOS03_44360 PF07715 TonB-dependent Receptor Plug Domain YZOS03_44370 PF00206 Lyase YZOS03_44370 PF02655 ATP-grasp domain YZOS03_44380 PF06276 Ferric iron reductase FhuF-like transporter YZOS03_44380 PF04183 IucA / IucC family YZOS03_44390 PF07690 Major Facilitator Superfamily YZOS03_44400 PF04183 IucA / IucC family YZOS03_44400 PF06276 Ferric iron reductase FhuF-like transporter YZOS03_44410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YZOS03_44410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YZOS03_44430 PF01547 Bacterial extracellular solute-binding protein YZOS03_44440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_44440 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_44440 PF08521 Two-component sensor kinase N-terminal YZOS03_44450 PF00072 Response regulator receiver domain YZOS03_44450 PF00486 Transcriptional regulatory protein, C terminal YZOS03_44460 PF02378 Phosphotransferase system, EIIC YZOS03_44460 PF00367 phosphotransferase system, EIIB YZOS03_44480 PF01136 Peptidase family U32 YZOS03_44500 PF00005 ABC transporter YZOS03_44510 PF12704 MacB-like periplasmic core domain YZOS03_44510 PF02687 FtsX-like permease family YZOS03_44580 PF02566 OsmC-like protein YZOS03_44590 PF01047 MarR family YZOS03_44600 PF10417 C-terminal domain of 1-Cys peroxiredoxin YZOS03_44600 PF00578 AhpC/TSA family YZOS03_44610 PF07992 Pyridine nucleotide-disulphide oxidoreductase YZOS03_44610 PF13192 Thioredoxin domain YZOS03_44650 PF03466 LysR substrate binding domain YZOS03_44650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_44660 PF12833 Helix-turn-helix domain YZOS03_44660 PF01965 DJ-1/PfpI family YZOS03_44670 PF08281 Sigma-70, region 4 YZOS03_44670 PF04542 Sigma-70 region 2 YZOS03_44710 PF03475 3-alpha domain YZOS03_44710 PF03473 MOSC domain YZOS03_44720 PF00271 Helicase conserved C-terminal domain YZOS03_44720 PF00270 DEAD/DEAH box helicase YZOS03_44740 PF00664 ABC transporter transmembrane region YZOS03_44740 PF00005 ABC transporter YZOS03_44760 PF01037 Lrp/AsnC ligand binding domain YZOS03_44810 PF00474 Sodium:solute symporter family YZOS03_44820 PF00474 Sodium:solute symporter family YZOS03_44840 PF18327 Proline utilization A proline dehydrogenase N-terminal domain YZOS03_44840 PF00171 Aldehyde dehydrogenase family YZOS03_44840 PF01619 Proline dehydrogenase YZOS03_44840 PF14850 DNA-binding domain of Proline dehydrogenase YZOS03_44850 PF12833 Helix-turn-helix domain YZOS03_44870 PF01243 Pyridoxamine 5'-phosphate oxidase YZOS03_44870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YZOS03_44880 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_44880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_44880 PF02743 Cache domain YZOS03_44890 PF00158 Sigma-54 interaction domain YZOS03_44890 PF00072 Response regulator receiver domain YZOS03_44890 PF02954 Bacterial regulatory protein, Fis family YZOS03_44900 PF00529 HlyD membrane-fusion protein of T1SS YZOS03_44930 PF00005 ABC transporter YZOS03_44930 PF00664 ABC transporter transmembrane region YZOS03_44930 PF03412 Peptidase C39 family YZOS03_44960 PF03358 NADPH-dependent FMN reductase YZOS03_44970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YZOS03_44980 PF00246 Zinc carboxypeptidase YZOS03_44990 PF01380 SIS domain YZOS03_44990 PF01418 Helix-turn-helix domain, rpiR family YZOS03_45000 PF01380 SIS domain YZOS03_45010 PF02378 Phosphotransferase system, EIIC YZOS03_45010 PF00367 phosphotransferase system, EIIB YZOS03_45020 PF00267 Gram-negative porin YZOS03_45030 PF03575 Peptidase family S51 YZOS03_45040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_45040 PF03466 LysR substrate binding domain YZOS03_45050 PF00132 Bacterial transferase hexapeptide (six repeats) YZOS03_45070 PF13718 GNAT acetyltransferase 2 YZOS03_45070 PF05127 Helicase YZOS03_45080 PF08775 ParB family YZOS03_45080 PF02195 ParB-like nuclease domain YZOS03_45090 PF13614 AAA domain YZOS03_45090 PF18607 ParA helix turn helix domain YZOS03_45120 PF00005 ABC transporter YZOS03_45120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_45130 PF00005 ABC transporter YZOS03_45130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YZOS03_45150 PF08719 Domain of unknown function (DUF1768) YZOS03_45150 PF00925 GTP cyclohydrolase II YZOS03_45170 PF17149 Periplasmic sensor domain found in signal transduction proteins YZOS03_45170 PF00672 HAMP domain YZOS03_45170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_45170 PF01627 Hpt domain YZOS03_45170 PF00072 Response regulator receiver domain YZOS03_45170 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_45190 PF01709 Transcriptional regulator YZOS03_45200 PF01098 Cell cycle protein YZOS03_45220 PF00005 ABC transporter YZOS03_45260 PF06580 Histidine kinase YZOS03_45260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_45260 PF13492 GAF domain YZOS03_45260 PF07694 5TMR of 5TMR-LYT YZOS03_45270 PF00072 Response regulator receiver domain YZOS03_45270 PF04397 LytTr DNA-binding domain YZOS03_45280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YZOS03_45290 PF17200 Single Cache domain 2 YZOS03_45290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YZOS03_45290 PF00672 HAMP domain YZOS03_45320 PF03616 Sodium/glutamate symporter YZOS03_45340 PF00005 ABC transporter YZOS03_45350 PF00155 Aminotransferase class I and II YZOS03_45350 PF00392 Bacterial regulatory proteins, gntR family YZOS03_45360 PF03616 Sodium/glutamate symporter YZOS03_45380 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YZOS03_45410 PF03466 LysR substrate binding domain YZOS03_45410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_45420 PF02678 Pirin YZOS03_45420 PF17954 Quercetinase C-terminal cupin domain YZOS03_45430 PF07681 DoxX YZOS03_45450 PF12833 Helix-turn-helix domain YZOS03_45450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YZOS03_45450 PF02805 Metal binding domain of Ada YZOS03_45450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YZOS03_45460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YZOS03_45460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YZOS03_45480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 YZOS03_45500 PF03600 Citrate transporter YZOS03_45530 PF12697 Alpha/beta hydrolase family YZOS03_45540 PF00704 Glycosyl hydrolases family 18 YZOS03_45540 PF08329 Chitinase A, N-terminal domain YZOS03_45560 PF06865 Pyrimidine/purine nucleoside phosphorylase YZOS03_45580 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_45580 PF03707 Bacterial signalling protein N terminal repeat YZOS03_45580 PF00563 EAL domain YZOS03_45590 PF01554 MatE YZOS03_45600 PF00849 RNA pseudouridylate synthase YZOS03_45630 PF03466 LysR substrate binding domain YZOS03_45630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_45660 PF00990 Diguanylate cyclase, GGDEF domain YZOS03_45660 PF17152 Periplasmic sensor domain YZOS03_45680 PF00756 Putative esterase YZOS03_45690 PF08240 Alcohol dehydrogenase GroES-like domain YZOS03_45690 PF00107 Zinc-binding dehydrogenase YZOS03_45700 PF00797 N-acetyltransferase YZOS03_45710 PF03466 LysR substrate binding domain YZOS03_45710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YZOS03_45720 PF04954 Siderophore-interacting protein YZOS03_45720 PF08021 Siderophore-interacting FAD-binding domain YZOS03_45730 PF01810 LysE type translocator YZOS03_45740 PF01037 Lrp/AsnC ligand binding domain YZOS03_45780 PF13599 Pentapeptide repeats (9 copies) YZOS03_45790 PF03922 OmpW family YZOS03_45800 PF13533 Biotin-lipoyl like YZOS03_45810 PF07690 Major Facilitator Superfamily YZOS03_45830 PF12706 Beta-lactamase superfamily domain YZOS03_45840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YZOS03_45910 PF05651 Putative sugar diacid recognition YZOS03_45910 PF17853 GGDEF-like domain YZOS03_45910 PF13556 PucR C-terminal helix-turn-helix domain YZOS03_45920 PF02447 GntP family permease YZOS03_45930 PF02595 Glycerate kinase family YZOS03_45940 PF00155 Aminotransferase class I and II YZOS03_45940 PF00392 Bacterial regulatory proteins, gntR family YZOS03_45980 PF00583 Acetyltransferase (GNAT) family YZOS03_46020 PF13302 Acetyltransferase (GNAT) domain YZOS03_46030 PF03264 NapC/NirT cytochrome c family, N-terminal region YZOS03_46040 PF00384 Molybdopterin oxidoreductase YZOS03_46040 PF01568 Molydopterin dinucleotide binding domain YZOS03_46040 PF18364 Molybdopterin oxidoreductase N-terminal domain YZOS03_46060 PF02581 Thiamine monophosphate synthase YZOS03_46070 PF02110 Hydroxyethylthiazole kinase family YZOS03_46080 PF03070 TENA/THI-4/PQQC family YZOS03_46090 PF09084 NMT1/THI5 like YZOS03_46100 PF00528 Binding-protein-dependent transport system inner membrane component YZOS03_46110 PF00005 ABC transporter YZOS03_46120 PF08543 Phosphomethylpyrimidine kinase YZOS03_46140 PF01523 Putative modulator of DNA gyrase YZOS03_46150 PF01523 Putative modulator of DNA gyrase YZOS03_46160 PF04013 Putative SAM-dependent RNA methyltransferase YZOS03_46200 PF10928 Protein of unknown function (DUF2810) YZOS03_46210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YZOS03_46210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YZOS03_46230 PF03009 Glycerophosphoryl diester phosphodiesterase family YZOS03_46240 PF00486 Transcriptional regulatory protein, C terminal YZOS03_46240 PF00072 Response regulator receiver domain YZOS03_46250 PF00512 His Kinase A (phospho-acceptor) domain YZOS03_46250 PF16750 Sensor domain of 2-component histidine kinase YZOS03_46250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YZOS03_46250 PF00672 HAMP domain YZOS03_46260 PF07715 TonB-dependent Receptor Plug Domain YZOS03_46260 PF00593 TonB dependent receptor YZOS03_46280 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_46290 PF01618 MotA/TolQ/ExbB proton channel family YZOS03_46300 PF02472 Biopolymer transport protein ExbD/TolR