locus-tag	class	description
YZOS03_00010	COG0592	DNA-directed DNA polymerase activity
YZOS03_00030	COG0187	DNA topoisomerase II activity
YZOS03_00060	COG0071	Belongs to the small heat shock protein (HSP20) family
YZOS03_00070	COG3977	Valine--pyruvate aminotransferase
YZOS03_00080	COG0366	Alpha amylase catalytic
YZOS03_00110	COG2119	membrane
YZOS03_00130	COG0425	Belongs to the sulfur carrier protein TusA family
YZOS03_00160	COG0604	alcohol dehydrogenase
YZOS03_00170	COG0183	Belongs to the thiolase family
YZOS03_00190	COG1739	Uncharacterized protein family UPF0029
YZOS03_00200	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
YZOS03_00220	COG2132	Multicopper oxidase
YZOS03_00260	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
YZOS03_00270	COG2104	thiamine diphosphate biosynthetic process
YZOS03_00300	COG0006	proline dipeptidase activity
YZOS03_00300	COG0006	proline dipeptidase activity
YZOS03_00360	COG3220	belongs to the UPF0276 family
YZOS03_00380	COG0210	DNA helicase
YZOS03_00390	COG0405	Gamma-glutamyltransferase
YZOS03_00400	COG1280	lysine exporter protein (LysE YggA)
YZOS03_00420	COG2962	Rard protein
YZOS03_00430	COG0514	ATP-dependent DNA helicase (RecQ)
YZOS03_00450	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
YZOS03_00470	COG0248	Ppx GppA phosphatase
YZOS03_00480	COG0513	Belongs to the DEAD box helicase family
YZOS03_00490	COG3118	belongs to the thioredoxin family
YZOS03_00520	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
YZOS03_00530	COG0633	Ferredoxin
YZOS03_00560	COG3071	HemY protein
YZOS03_00570	COG2959	enzyme of heme biosynthesis
YZOS03_00590	COG1587	Uroporphyrinogen-III synthase
YZOS03_00600	COG0181	hydroxymethylbilane synthase activity
YZOS03_00610	COG3072	Adenylate cyclase
YZOS03_00620	COG3072	Adenylate cyclase
YZOS03_00630	COG1965	Belongs to the frataxin family
YZOS03_00640	COG0019	diaminopimelate decarboxylase activity
YZOS03_00670	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
YZOS03_00680	COG1011	Hydrolase
YZOS03_00690	COG2199	diguanylate cyclase activity
YZOS03_00690	COG3287	FIST C domain
YZOS03_00690	COG2200	EAL domain
YZOS03_00700	COG3148	PFAM DTW domain containing protein
YZOS03_00730	COG0561	phosphatase activity
YZOS03_00740	COG2267	carboxylic ester hydrolase activity
YZOS03_00750	COG1280	lysine exporter protein (LysE YggA)
YZOS03_00760	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
YZOS03_00770	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
YZOS03_00780	COG0640	Transcriptional regulator
YZOS03_00790	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
YZOS03_00870	COG2095	MarC family integral membrane protein
YZOS03_00890	COG0742	ribosomal rna small subunit methyltransferase
YZOS03_00900	COG0552	protein localization to endoplasmic reticulum
YZOS03_00900	COG0552	protein localization to endoplasmic reticulum
YZOS03_00910	COG2884	Cell division ATP-binding protein ftsE
YZOS03_00920	COG2177	Part of the ABC transporter FtsEX involved in
YZOS03_00940	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
YZOS03_00950	COG0705	Rhomboid family
YZOS03_00960	COG1580	Controls the rotational direction of flagella during chemotaxis
YZOS03_00970	COG3161	chorismate lyase activity
YZOS03_00980	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
YZOS03_00990	COG2937	Belongs to the GPAT DAPAT family
YZOS03_01000	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
YZOS03_01020	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
YZOS03_01030	COG0534	Mate efflux family protein
YZOS03_01040	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
YZOS03_01050	COG1309	transcriptional regulator
YZOS03_01080	COG4206	TonB-dependent receptor
YZOS03_01120	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
YZOS03_01140	COG0812	UDP-N-acetylmuramate dehydrogenase activity
YZOS03_01150	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
YZOS03_01150	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
YZOS03_01170	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
YZOS03_01180	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
YZOS03_01190	COG0250	Participates in transcription elongation, termination and antitermination
YZOS03_01220	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
YZOS03_01230	COG0222	ribosome binding
YZOS03_01240	COG0085	RNA polymerase activity
YZOS03_01250	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YZOS03_01260	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
YZOS03_01270	COG2816	NAD+ diphosphatase activity
YZOS03_01280	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
YZOS03_01290	COG1573	uracil-dna glycosylase
YZOS03_01310	COG3068	Protein conserved in bacteria
YZOS03_01320	COG1253	flavin adenine dinucleotide binding
YZOS03_01350	COG0151	Belongs to the GarS family
YZOS03_01380	COG0789	Transcriptional regulator
YZOS03_01390	COG3710	Transcriptional regulator
YZOS03_01410	COG0531	amino acid
YZOS03_01420	COG1982	Orn Lys Arg decarboxylase major
YZOS03_01430	COG0488	(ABC) transporter
YZOS03_01450	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
YZOS03_01460	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
YZOS03_01470	COG2264	protein methyltransferase activity
YZOS03_01480	COG0439	Biotin carboxylase
YZOS03_01490	COG0511	ligase activity, forming carbon-carbon bonds
YZOS03_01500	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
YZOS03_01510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
YZOS03_01540	COG2814	Major facilitator Superfamily
YZOS03_01590	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
YZOS03_01610	COG3263	regulation of cellular component size
YZOS03_01630	COG4232	protein-disulfide reductase activity
YZOS03_01640	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
YZOS03_01650	COG1027	Aspartate ammonia-lyase
YZOS03_01660	COG3030	protein affecting phage T7 exclusion by the F plasmid
YZOS03_01670	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
YZOS03_01690	COG2205	protein histidine kinase activity
YZOS03_01700	COG0745	RESPONSE REGULATOR receiver
YZOS03_01710	COG3678	ATP-independent chaperone mediated protein folding
YZOS03_01720	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
YZOS03_01730	COG0205	6-phosphofructokinase activity
YZOS03_01740	COG0534	Mate efflux family protein
YZOS03_01760	COG0459	protein refolding
YZOS03_01780	COG1285	pathogenesis
YZOS03_01790	COG1509	lysine 2,3-aminomutase activity
YZOS03_01820	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
YZOS03_01830	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
YZOS03_01840	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
YZOS03_01850	COG1053	succinate dehydrogenase
YZOS03_01860	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
YZOS03_01900	COG4942	peptidase
YZOS03_01910	COG1045	serine acetyltransferase
YZOS03_01920	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
YZOS03_01930	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
YZOS03_01940	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
YZOS03_01950	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YZOS03_01970	COG0471	metal ion transport
YZOS03_01980	COG0688	phosphatidylethanolamine metabolic process
YZOS03_01990	COG1162	GTPase activity
YZOS03_02000	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
YZOS03_02010	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
YZOS03_02020	COG0802	atpase or kinase
YZOS03_02040	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YZOS03_02050	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
YZOS03_02070	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
YZOS03_02080	COG0330	HflC and HflK could
YZOS03_02090	COG0330	HflC and HflK could
YZOS03_02100	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
YZOS03_02110	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
YZOS03_02120	COG1017	nitric oxide dioxygenase activity
YZOS03_02120	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
YZOS03_02130	COG1959	2 iron, 2 sulfur cluster binding
YZOS03_02140	COG0557	exoribonuclease II activity
YZOS03_02150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
YZOS03_02160	COG0546	phosphoglycolate phosphatase activity
YZOS03_02170	COG0180	Tryptophanyl-tRNA synthetase
YZOS03_02200	COG0512	Glutamine amidotransferase of anthranilate synthase
YZOS03_02210	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
YZOS03_02250	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
YZOS03_02260	COG3954	Phosphoribulokinase
YZOS03_02280	COG0429	hydrolase of the alpha beta-hydrolase fold
YZOS03_02300	COG0488	(ABC) transporter
YZOS03_02310	COG2249	NAD(P)H dehydrogenase (quinone) activity
YZOS03_02340	COG1047	Peptidyl-prolyl cis-trans
YZOS03_02350	COG1446	asparaginase
YZOS03_02380	COG0545	Peptidyl-prolyl cis-trans isomerase
YZOS03_02390	COG2964	Protein conserved in bacteria
YZOS03_02400	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
YZOS03_02410	COG2923	Belongs to the DsrF TusC family
YZOS03_02450	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
YZOS03_02460	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
YZOS03_02480	COG0281	malic enzyme
YZOS03_02490	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
YZOS03_02500	COG0626	cystathionine gamma-synthase activity
YZOS03_02510	COG0527	aspartate kinase activity
YZOS03_02510	COG0460	homoserine dehydrogenase
YZOS03_02520	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
YZOS03_02540	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
YZOS03_02560	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
YZOS03_02580	COG0137	argininosuccinate synthase activity
YZOS03_02590	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
YZOS03_02590	COG0165	Argininosuccinate lyase
YZOS03_02610	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
YZOS03_02610	COG0678	peroxiredoxin activity
YZOS03_02630	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
YZOS03_02690	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
YZOS03_02700	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
YZOS03_02720	COG0338	D12 class N6 adenine-specific DNA methyltransferase
YZOS03_02730	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
YZOS03_02740	COG0360	Binds together with S18 to 16S ribosomal RNA
YZOS03_02750	COG2965	DNA replication, synthesis of RNA primer
YZOS03_02800	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
YZOS03_02810	COG0432	Pfam Uncharacterised protein family UPF0047
YZOS03_02820	COG0166	Belongs to the GPI family
YZOS03_02840	COG0735	belongs to the Fur family
YZOS03_02850	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
YZOS03_02890	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
YZOS03_02900	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
YZOS03_02910	COG0175	sulfate reduction
YZOS03_02940	COG1410	methionine synthase
YZOS03_02940	COG0646	methionine synthase
YZOS03_02950	COG0527	aspartate kinase activity
YZOS03_02960	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
YZOS03_02980	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YZOS03_03010	COG0629	single-stranded DNA binding
YZOS03_03020	COG2199	diguanylate cyclase activity
YZOS03_03020	COG2200	EAL domain
YZOS03_03060	COG1450	Type ii and iii secretion system protein
YZOS03_03070	COG3267	Type II secretory pathway component ExeA
YZOS03_03070	COG3409	Peptidoglycan-binding domain 1 protein
YZOS03_03090	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
YZOS03_03100	COG1459	type II secretion system
YZOS03_03120	COG2165	general secretion pathway protein
YZOS03_03200	COG1077	Cell shape determining protein MreB Mrl
YZOS03_03210	COG1792	Involved in formation and maintenance of cell shape
YZOS03_03220	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
YZOS03_03230	COG0424	maF-like protein
YZOS03_03250	COG3164	Protein of unknown function
YZOS03_03260	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
YZOS03_03270	COG0312	modulator of DNA gyrase
YZOS03_03280	COG0312	modulator of DNA gyrase
YZOS03_03290	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
YZOS03_03300	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
YZOS03_03320	COG0564	pseudouridine synthase activity
YZOS03_03330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
YZOS03_03340	COG3028	Belongs to the UPF0307 family
YZOS03_03350	COG0312	modulator of DNA gyrase
YZOS03_03360	COG2239	Acts as a magnesium transporter
YZOS03_03370	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
YZOS03_03380	COG1660	Displays ATPase and GTPase activities
YZOS03_03390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
YZOS03_03400	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
YZOS03_03420	COG1137	ATPase activity
YZOS03_03430	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
YZOS03_03450	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
YZOS03_03450	COG0517	IMP dehydrogenase activity
YZOS03_03470	COG1127	ABC transporter
YZOS03_03480	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
YZOS03_03490	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
YZOS03_03500	COG2854	intermembrane phospholipid transfer
YZOS03_03520	COG5007	Belongs to the BolA IbaG family
YZOS03_03530	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
YZOS03_03540	COG0204	Acyl-transferase
YZOS03_03550	COG0251	oxidation-reduction process
YZOS03_03560	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
YZOS03_03570	COG0540	Belongs to the ATCase OTCase family
YZOS03_03620	COG0456	acetyltransferase
YZOS03_03640	COG0525	valine-tRNA ligase activity
YZOS03_03650	COG2927	DNA polymerase III (CHI subunit)
YZOS03_03660	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
YZOS03_03670	COG0795	lipopolysaccharide-transporting ATPase activity
YZOS03_03680	COG0795	lipopolysaccharide-transporting ATPase activity
YZOS03_03720	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_03730	COG0726	polysaccharide deacetylase
YZOS03_03740	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
YZOS03_03750	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
YZOS03_03760	COG1447	Phosphotransferase system cellobiose-specific component IIA
YZOS03_03770	COG1486	melibiose metabolic process
YZOS03_03780	COG3394	polysaccharide catabolic process
YZOS03_03790	COG1609	Transcriptional regulator
YZOS03_03800	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
YZOS03_03840	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
YZOS03_03860	COG0220	tRNA (guanine-N7-)-methyltransferase activity
YZOS03_03880	COG2066	Belongs to the glutaminase family
YZOS03_03890	COG0635	Involved in the biosynthesis of porphyrin-containing compound
YZOS03_03900	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
YZOS03_03920	COG1872	DUF167
YZOS03_03930	COG0762	integral membrane protein
YZOS03_03940	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
YZOS03_03950	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
YZOS03_03980	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
YZOS03_03990	COG1678	Uncharacterized ACR, COG1678
YZOS03_04000	COG0189	ligase activity
YZOS03_04010	COG1385	rRNA (uridine-N3-)-methyltransferase activity
YZOS03_04020	COG2356	endonuclease I
YZOS03_04060	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
YZOS03_04070	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
YZOS03_04080	COG0583	DNA-binding transcription factor activity
YZOS03_04090	COG4771	TonB-dependent receptor
YZOS03_04120	COG0191	fructose-bisphosphate aldolase activity
YZOS03_04130	COG0668	transmembrane transport
YZOS03_04160	COG0583	DNA-binding transcription factor activity
YZOS03_04180	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
YZOS03_04190	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
YZOS03_04200	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
YZOS03_04210	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
YZOS03_04220	COG3079	Belongs to the UPF0149 family
YZOS03_04230	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
YZOS03_04240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
YZOS03_04280	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
YZOS03_04300	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
YZOS03_04310	COG1595	DNA-templated transcription, initiation
YZOS03_04340	COG3086	response to oxidative stress
YZOS03_04350	COG0481	GTPase activity
YZOS03_04360	COG0681	Belongs to the peptidase S26 family
YZOS03_04380	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
YZOS03_04390	COG1381	Involved in DNA repair and RecF pathway recombination
YZOS03_04400	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
YZOS03_04410	COG0736	holo-[acyl-carrier-protein] synthase activity
YZOS03_04430	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
YZOS03_04440	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
YZOS03_04450	COG3956	TIGRFAM MazG family protein
YZOS03_04460	COG0504	CTP synthase activity
YZOS03_04470	COG0148	phosphopyruvate hydratase activity
YZOS03_04480	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
YZOS03_04490	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
YZOS03_04500	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
YZOS03_04520	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
YZOS03_04530	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
YZOS03_04550	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
YZOS03_04560	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
YZOS03_04570	COG1546	Belongs to the CinA family
YZOS03_04580	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
YZOS03_04590	COG2137	regulation of response to DNA damage stimulus
YZOS03_04600	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
YZOS03_04610	COG0527	aspartate kinase activity
YZOS03_04630	COG3630	sodium ion export across plasma membrane
YZOS03_04640	COG0511	ligase activity, forming carbon-carbon bonds
YZOS03_04640	COG5016	pyruvate
YZOS03_04650	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
YZOS03_04670	COG1238	metal cluster binding
YZOS03_04680	COG0612	Peptidase, M16
YZOS03_04710	COG1854	S-ribosylhomocysteine lyase activity
YZOS03_04720	COG4536	flavin adenine dinucleotide binding
YZOS03_04730	COG4137	Cytochrome C assembly protein
YZOS03_04740	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
YZOS03_04750	COG0228	four-way junction DNA binding
YZOS03_04760	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
YZOS03_04790	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
YZOS03_04800	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
YZOS03_04810	COG0237	dephospho-CoA kinase activity
YZOS03_04830	COG1459	type II secretion system
YZOS03_04840	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
YZOS03_04850	COG4969	Belongs to the N-Me-Phe pilin family
YZOS03_04860	COG0157	Belongs to the NadC ModD family
YZOS03_04880	COG2186	Transcriptional regulator
YZOS03_04890	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
YZOS03_04900	COG0508	dehydrogenase complex catalyzes the overall conversion of
YZOS03_04910	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
YZOS03_04940	COG0288	reversible hydration of carbon dioxide
YZOS03_04950	COG0659	secondary active sulfate transmembrane transporter activity
YZOS03_04960	COG0659	secondary active sulfate transmembrane transporter activity
YZOS03_04970	COG1131	(ABC) transporter
YZOS03_04980	COG1131	(ABC) transporter
YZOS03_04990	COG0842	Transport permease protein
YZOS03_05000	COG1560	Kdo2-lipid A biosynthetic process
YZOS03_05010	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
YZOS03_05020	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
YZOS03_05030	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YZOS03_05050	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
YZOS03_05070	COG1489	DNA binding
YZOS03_05080	COG1643	Atp-dependent helicase
YZOS03_05090	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
YZOS03_05100	COG1752	Esterase of the alpha-beta hydrolase superfamily
YZOS03_05110	COG1049	propionate catabolic process, 2-methylcitrate cycle
YZOS03_05140	COG0004	ammonium transporteR
YZOS03_05150	COG1840	ABC-type Fe3 transport system, periplasmic component
YZOS03_05170	COG3842	ATPase activity
YZOS03_05180	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YZOS03_05210	COG2971	BadF BadG BcrA BcrD
YZOS03_05230	COG4608	Belongs to the ABC transporter superfamily
YZOS03_05240	COG0444	Belongs to the ABC transporter superfamily
YZOS03_05250	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
YZOS03_05270	COG0747	negative chemotaxis
YZOS03_05280	COG0784	Response regulator, receiver
YZOS03_05280	COG2205	protein histidine kinase activity
YZOS03_05300	COG0628	permease
YZOS03_05340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_05350	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_05360	COG0739	heme binding
YZOS03_05370	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
YZOS03_05390	COG2027	D-alanyl-D-alanine carboxypeptidase
YZOS03_05400	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
YZOS03_05410	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YZOS03_05420	COG1534	Rna-binding protein
YZOS03_05430	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
YZOS03_05440	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
YZOS03_05450	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
YZOS03_05460	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YZOS03_05480	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
YZOS03_05490	COG0779	Required for maturation of 30S ribosomal subunits
YZOS03_05500	COG0195	Participates in both transcription termination and antitermination
YZOS03_05510	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YZOS03_05520	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
YZOS03_05530	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
YZOS03_05540	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
YZOS03_05550	COG1185	polyribonucleotide nucleotidyltransferase activity
YZOS03_05580	COG0534	Mate efflux family protein
YZOS03_05590	COG0826	peptidase U32
YZOS03_05600	COG0826	peptidase U32
YZOS03_05620	COG3154	lipid carrier protein
YZOS03_05630	COG3153	acetyltransferase
YZOS03_05690	COG0084	hydrolase, TatD family'
YZOS03_05700	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
YZOS03_05720	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
YZOS03_05730	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
YZOS03_05740	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
YZOS03_05750	COG0813	purine-nucleoside phosphorylase activity
YZOS03_05770	COG0560	Phosphoserine phosphatase
YZOS03_05790	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
YZOS03_05800	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
YZOS03_05810	COG0583	DNA-binding transcription factor activity
YZOS03_05830	COG1022	Amp-dependent synthetase and ligase
YZOS03_05910	COG0583	DNA-binding transcription factor activity
YZOS03_05920	COG1609	Transcriptional regulator
YZOS03_05960	COG0598	Magnesium transport protein CorA
YZOS03_05970	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
YZOS03_05980	COG1349	DNA-binding transcription factor activity
YZOS03_05990	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
YZOS03_06000	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
YZOS03_06010	COG2271	Major facilitator Superfamily
YZOS03_06020	COG0584	glycerophosphoryl diester phosphodiesterase
YZOS03_06030	COG2171	N-acyltransferase activity
YZOS03_06060	COG3141	response to X-ray
YZOS03_06100	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
YZOS03_06110	COG1074	ATP-dependent DNA helicase activity
YZOS03_06120	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
YZOS03_06160	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
YZOS03_06160	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
YZOS03_06180	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
YZOS03_06190	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
YZOS03_06200	COG2166	iron-sulfur cluster assembly
YZOS03_06210	COG3706	GGDEF domain
YZOS03_06220	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
YZOS03_06230	COG0693	protein deglycase activity
YZOS03_06240	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
YZOS03_06280	COG1595	DNA-templated transcription, initiation
YZOS03_06320	COG3056	Lipoprotein
YZOS03_06330	COG2813	Specifically methylates the guanine in position
YZOS03_06340	COG0271	Belongs to the BolA IbaG family
YZOS03_06350	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
YZOS03_06360	COG1805	sodium ion transport
YZOS03_06370	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
YZOS03_06380	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
YZOS03_06390	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
YZOS03_06400	COG2871	sodium ion transport
YZOS03_06410	COG1477	protein flavinylation
YZOS03_06450	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
YZOS03_06460	COG0514	ATP-dependent DNA helicase (RecQ)
YZOS03_06470	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YZOS03_06500	COG0733	neurotransmitter:sodium symporter activity
YZOS03_06540	COG0442	prolyl-tRNA aminoacylation
YZOS03_06550	COG1720	tRNA m6t6A37 methyltransferase activity
YZOS03_06560	COG0254	rRNA binding
YZOS03_06570	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
YZOS03_06590	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
YZOS03_06620	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
YZOS03_06630	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
YZOS03_06700	COG0564	pseudouridine synthase activity
YZOS03_06720	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
YZOS03_06730	COG0024	Methionine aminopeptidase
YZOS03_06740	COG0052	Belongs to the universal ribosomal protein uS2 family
YZOS03_06750	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
YZOS03_06760	COG0528	UMP kinase activity
YZOS03_06770	COG0233	cytoplasmic translational termination
YZOS03_06780	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
YZOS03_06790	COG0575	Belongs to the CDS family
YZOS03_06800	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
YZOS03_06810	COG0750	zinc metalloprotease
YZOS03_06830	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
YZOS03_06840	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
YZOS03_06860	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
YZOS03_06870	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
YZOS03_06890	COG0587	DNA-directed DNA polymerase activity
YZOS03_06900	COG0825	malonyl-CoA metabolic process
YZOS03_06930	COG0347	Belongs to the P(II) protein family
YZOS03_06940	COG3021	interspecies interaction between organisms
YZOS03_06960	COG1388	LysM domain
YZOS03_06960	COG0741	lytic transglycosylase activity
YZOS03_06970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
YZOS03_06980	COG2226	methyltransferase
YZOS03_06990	COG0328	RNA-DNA hybrid ribonuclease activity
YZOS03_07060	COG1960	acyl-CoA dehydrogenase activity
YZOS03_07070	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
YZOS03_07080	COG0121	glutamine amidotransferase
YZOS03_07090	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
YZOS03_07100	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
YZOS03_07110	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
YZOS03_07120	COG2233	PERMEase
YZOS03_07160	COG1393	Belongs to the ArsC family
YZOS03_07170	COG4783	chaperone-mediated protein folding
YZOS03_07200	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
YZOS03_07220	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
YZOS03_07230	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
YZOS03_07260	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
YZOS03_07270	COG1393	Belongs to the ArsC family
YZOS03_07320	COG2837	iron assimilation
YZOS03_07330	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_07340	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_07350	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_07360	COG1334	flagellar protein FlaG
YZOS03_07370	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
YZOS03_07390	COG1516	flagellar protein fliS
YZOS03_07430	COG1677	Flagellar hook-basal body complex protein FliE
YZOS03_07450	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
YZOS03_07560	COG1987	bacterial-type flagellum assembly
YZOS03_07570	COG1684	flagellar biosynthetic protein fliR
YZOS03_07640	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
YZOS03_07650	COG2198	Histidine kinase
YZOS03_07650	COG0784	Response regulator, receiver
YZOS03_07650	COG0643	Histidine kinase
YZOS03_07660	COG2201	protein-glutamate methylesterase activity
YZOS03_07670	COG1192	Involved in chromosome partitioning
YZOS03_07690	COG0835	chemotaxis
YZOS03_07710	COG4133	protoheme IX ABC transporter activity
YZOS03_07720	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
YZOS03_07730	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
YZOS03_07740	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
YZOS03_07750	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
YZOS03_07760	COG1138	Cytochrome C-type biogenesis protein
YZOS03_07770	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
YZOS03_07790	COG3088	subunit of a heme lyase
YZOS03_07790	COG4235	cytochrome complex assembly
YZOS03_07810	COG2067	long-chain fatty acid transport protein
YZOS03_07860	COG0183	Belongs to the thiolase family
YZOS03_07870	COG1250	3-hydroxyacyl-CoA dehydrogenase
YZOS03_07870	COG1024	Enoyl-CoA hydratase
YZOS03_07900	COG2062	phosphohistidine phosphatase, SixA
YZOS03_07910	COG2840	Smr protein MutS2
YZOS03_07920	COG2890	protein-(glutamine-N5) methyltransferase activity
YZOS03_07930	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
YZOS03_07940	COG2860	membrane
YZOS03_07960	COG3101	peptidyl-lysine hydroxylation
YZOS03_07980	COG0431	NADPH-dependent FMN reductase
YZOS03_07990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
YZOS03_07990	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
YZOS03_08000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
YZOS03_08010	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
YZOS03_08020	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
YZOS03_08040	COG0101	tRNA pseudouridine synthase activity
YZOS03_08050	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
YZOS03_08060	COG0285	dihydrofolate synthase activity
YZOS03_08070	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
YZOS03_08080	COG1286	toxin biosynthetic process
YZOS03_08090	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
YZOS03_08100	COG0583	DNA-binding transcription factor activity
YZOS03_08110	COG0745	RESPONSE REGULATOR receiver
YZOS03_08140	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
YZOS03_08170	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
YZOS03_08180	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
YZOS03_08200	COG2261	transglycosylase associated protein
YZOS03_08210	COG2983	Belongs to the UPF0260 family
YZOS03_08220	COG0668	transmembrane transport
YZOS03_08230	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
YZOS03_08240	COG0346	lactoylglutathione lyase activity
YZOS03_08260	COG1785	Belongs to the alkaline phosphatase family
YZOS03_08290	COG2226	methyltransferase
YZOS03_08310	COG0676	glucose-6-phosphate 1-epimerase activity
YZOS03_08320	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
YZOS03_08330	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
YZOS03_08350	COG3139	Protein of unknown function (DUF1315)
YZOS03_08360	COG0252	asparaginase activity
YZOS03_08370	COG0616	signal peptide processing
YZOS03_08380	COG0446	pyridine nucleotide-disulphide oxidoreductase
YZOS03_08380	COG1902	pentaerythritol trinitrate reductase activity
YZOS03_08400	COG0778	Nitroreductase
YZOS03_08410	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
YZOS03_08440	COG0123	including yeast histone deacetylase and acetoin utilization protein
YZOS03_08460	COG3082	Protein of unknown function (DUF1414)
YZOS03_08470	COG3081	Nucleoid-associated protein
YZOS03_08500	COG1757	Na H antiporter
YZOS03_08510	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
YZOS03_08520	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
YZOS03_08530	COG2095	MarC family integral membrane protein
YZOS03_08540	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_08540	COG1454	alcohol dehydrogenase
YZOS03_08580	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
YZOS03_08600	COG2056	Na+-H+ antiporter family
YZOS03_08610	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
YZOS03_08620	COG2885	chlorophyll binding
YZOS03_08640	COG0346	lactoylglutathione lyase activity
YZOS03_08650	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
YZOS03_08660	COG4660	Part of a membrane complex involved in electron transport
YZOS03_08670	COG4659	FMN binding
YZOS03_08680	COG4658	electron transport chain
YZOS03_08690	COG4656	Part of a membrane complex involved in electron transport
YZOS03_08700	COG4656	Part of a membrane complex involved in electron transport
YZOS03_08710	COG2878	Part of a membrane complex involved in electron transport
YZOS03_08720	COG4657	Part of a membrane complex involved in electron transport
YZOS03_08730	COG1882	Formate acetyltransferase
YZOS03_08740	COG0556	nucleotide-excision repair
YZOS03_08750	COG2204	response regulator
YZOS03_08760	COG2198	Histidine kinase
YZOS03_08770	COG0391	Required for morphogenesis under gluconeogenic growth conditions
YZOS03_08780	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
YZOS03_08790	COG0521	Mo-molybdopterin cofactor biosynthetic process
YZOS03_08800	COG0315	cyclic pyranopterin monophosphate synthase activity
YZOS03_08810	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
YZOS03_08820	COG0314	molybdopterin synthase activity
YZOS03_08840	COG0601	transmembrane transport
YZOS03_08850	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
YZOS03_08860	COG0444	Belongs to the ABC transporter superfamily
YZOS03_08880	COG0435	Glutathione S-transferase
YZOS03_08900	COG0857	belongs to the CobB CobQ family
YZOS03_08900	COG0280	phosphate acetyltransferase
YZOS03_08910	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
YZOS03_08920	COG3092	negative regulation of chromosome organization
YZOS03_08940	COG4120	Belongs to the binding-protein-dependent transport system permease family
YZOS03_08950	COG1122	ATPase activity
YZOS03_08960	COG0366	Alpha amylase catalytic
YZOS03_08970	COG3706	GGDEF domain
YZOS03_08980	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
YZOS03_08990	COG3012	SEC-C Motif Domain Protein
YZOS03_08990	COG3318	Belongs to the UPF0149 family
YZOS03_09000	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
YZOS03_09010	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
YZOS03_09020	COG2186	Transcriptional regulator
YZOS03_09060	COG0572	uridine kinase
YZOS03_09080	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
YZOS03_09090	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
YZOS03_09100	COG0659	secondary active sulfate transmembrane transporter activity
YZOS03_09110	COG1530	ribonuclease E activity
YZOS03_09120	COG0564	pseudouridine synthase activity
YZOS03_09130	COG0424	maF-like protein
YZOS03_09140	COG1399	metal-binding, possibly nucleic acid-binding protein
YZOS03_09160	COG0416	fatty acid biosynthetic process
YZOS03_09170	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
YZOS03_09230	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
YZOS03_09240	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
YZOS03_09250	COG0470	DNA polymerase III
YZOS03_09260	COG0084	hydrolase, TatD family'
YZOS03_09270	COG1263	PTS System
YZOS03_09270	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_09290	COG0733	neurotransmitter:sodium symporter activity
YZOS03_09310	COG4667	esterase of the alpha-beta hydrolase superfamily
YZOS03_09320	COG0469	pyruvate kinase activity
YZOS03_09330	COG1940	carbohydrate kinase activity
YZOS03_09340	COG0784	Response regulator, receiver
YZOS03_09340	COG0835	chemotaxis
YZOS03_09350	COG0587	DNA-directed DNA polymerase activity
YZOS03_09380	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_09390	COG0616	signal peptide processing
YZOS03_09400	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
YZOS03_09410	COG0539	negative regulation of cytoplasmic translation
YZOS03_09430	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
YZOS03_09440	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
YZOS03_09460	COG4166	transmembrane transport
YZOS03_09500	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
YZOS03_09500	COG3008	intermembrane lipid transfer
YZOS03_09510	COG2995	paraquat-inducible protein a
YZOS03_09520	COG3258	Cytochrome c
YZOS03_09530	COG2863	cytochrome
YZOS03_09600	COG4232	protein-disulfide reductase activity
YZOS03_09610	COG3118	belongs to the thioredoxin family
YZOS03_09630	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
YZOS03_09660	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_09680	COG1136	(ABC) transporter
YZOS03_09680	COG0577	efflux transmembrane transporter activity
YZOS03_09710	COG0577	efflux transmembrane transporter activity
YZOS03_09720	COG0577	efflux transmembrane transporter activity
YZOS03_09720	COG1136	(ABC) transporter
YZOS03_09820	COG5002	protein histidine kinase activity
YZOS03_09820	COG3850	Histidine kinase
YZOS03_09830	COG0745	RESPONSE REGULATOR receiver
YZOS03_09840	COG0463	Glycosyl transferase, family 2
YZOS03_09850	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
YZOS03_09900	COG1032	radical SAM domain protein
YZOS03_09910	COG5001	Diguanylate cyclase
YZOS03_09940	COG0583	DNA-binding transcription factor activity
YZOS03_09950	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
YZOS03_09970	COG2350	Protein conserved in bacteria
YZOS03_09990	COG2917	probably involved in intracellular septation
YZOS03_10030	COG1301	dicarboxylic acid transport
YZOS03_10040	COG0318	PFAM AMP-dependent synthetase and ligase
YZOS03_10050	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
YZOS03_10060	COG0159	tryptophan synthase activity
YZOS03_10080	COG0134	indole-3-glycerol-phosphate synthase activity
YZOS03_10080	COG0135	phosphoribosylanthranilate isomerase activity
YZOS03_10100	COG0512	Glutamine amidotransferase of anthranilate synthase
YZOS03_10110	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
YZOS03_10120	COG0613	PHP domain protein
YZOS03_10130	COG0009	L-threonylcarbamoyladenylate synthase
YZOS03_10150	COG1187	pseudouridine synthase activity
YZOS03_10190	COG0417	DNA replication proofreading
YZOS03_10200	COG2197	response regulator
YZOS03_10210	COG0322	excinuclease ABC activity
YZOS03_10260	COG0019	diaminopimelate decarboxylase activity
YZOS03_10320	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
YZOS03_10330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
YZOS03_10370	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
YZOS03_10390	COG0437	4 iron, 4 sulfur cluster binding
YZOS03_10400	COG3301	Polysulphide reductase, NrfD
YZOS03_10410	COG1138	Cytochrome C-type biogenesis protein
YZOS03_10430	COG3088	subunit of a heme lyase
YZOS03_10430	COG4235	cytochrome complex assembly
YZOS03_10450	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
YZOS03_10500	COG2989	Protein conserved in bacteria
YZOS03_10510	COG3108	Peptidase M15
YZOS03_10520	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
YZOS03_10550	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
YZOS03_10610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
YZOS03_10620	COG0840	transmembrane signaling receptor activity
YZOS03_10660	COG1448	Aminotransferase
YZOS03_10690	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_10710	COG0017	Asparaginyl-tRNA synthetase
YZOS03_10720	COG0840	transmembrane signaling receptor activity
YZOS03_10730	COG0720	synthase
YZOS03_10750	COG2200	EAL domain
YZOS03_10760	COG1760	l-serine dehydratase
YZOS03_10770	COG0814	amino acid
YZOS03_10780	COG0494	nUDIX hydrolase
YZOS03_10800	COG2205	protein histidine kinase activity
YZOS03_10800	COG0784	Response regulator, receiver
YZOS03_10850	COG3106	COG3106 Predicted ATPase
YZOS03_10860	COG3768	UPF0283 membrane protein
YZOS03_10880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
YZOS03_10980	COG1192	Involved in chromosome partitioning
YZOS03_11440	COG0232	Belongs to the dGTPase family. Type 2 subfamily
YZOS03_11630	COG0666	response to abiotic stimulus
YZOS03_11650	COG1715	Restriction endonuclease
YZOS03_11740	COG2026	Addiction module toxin, RelE StbE family
YZOS03_11980	COG0110	maltose O-acetyltransferase activity
YZOS03_11990	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
YZOS03_12040	COG5507	3-demethylubiquinone-9 3-methyltransferase
YZOS03_12050	COG1280	lysine exporter protein (LysE YggA)
YZOS03_12060	COG1280	lysine exporter protein (LysE YggA)
YZOS03_12080	COG0729	surface antigen
YZOS03_12090	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
YZOS03_12100	COG2272	Belongs to the type-B carboxylesterase lipase family
YZOS03_12150	COG2985	domain, Protein
YZOS03_12170	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
YZOS03_12200	COG0583	DNA-binding transcription factor activity
YZOS03_12230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_12260	COG3290	protein histidine kinase activity
YZOS03_12270	COG4565	transcriptional regulatory protein
YZOS03_12290	COG2207	Transcriptional regulator
YZOS03_12300	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
YZOS03_12310	COG0363	glucosamine-6-phosphate deaminase activity
YZOS03_12320	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
YZOS03_12360	COG3284	Transcriptional regulator
YZOS03_12370	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_12510	COG4669	(LipO)protein
YZOS03_12550	COG3177	Filamentation induced by cAMP protein fic
YZOS03_12610	COG2207	Transcriptional regulator
YZOS03_12620	COG4792	protein secretion
YZOS03_12630	COG4791	protein targeting
YZOS03_12640	COG4794	Type iii secretion
YZOS03_12650	COG4790	Type iii secretion
YZOS03_12790	COG0457	Tetratricopeptide repeat
YZOS03_12820	COG2358	TRAP transporter, solute receptor (TAXI family
YZOS03_12830	COG0730	response to heat
YZOS03_12900	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
YZOS03_12910	COG0372	Belongs to the citrate synthase family
YZOS03_12940	COG2828	Protein conserved in bacteria
YZOS03_12990	COG0561	phosphatase activity
YZOS03_13000	COG0602	queuosine metabolic process
YZOS03_13010	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
YZOS03_13040	COG0583	DNA-binding transcription factor activity
YZOS03_13060	COG0583	DNA-binding transcription factor activity
YZOS03_13100	COG0583	DNA-binding transcription factor activity
YZOS03_13140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
YZOS03_13150	COG0765	amino acid transport
YZOS03_13160	COG1126	abc transporter atp-binding protein
YZOS03_13170	COG0646	methionine synthase
YZOS03_13170	COG1410	methionine synthase
YZOS03_13200	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
YZOS03_13210	COG1335	isochorismatase
YZOS03_13240	COG0604	alcohol dehydrogenase
YZOS03_13260	COG2814	Major facilitator Superfamily
YZOS03_13270	COG0583	DNA-binding transcription factor activity
YZOS03_13290	COG0583	DNA-binding transcription factor activity
YZOS03_13300	COG0656	L-ascorbic acid biosynthetic process
YZOS03_13320	COG1414	Transcriptional regulator
YZOS03_13330	COG2199	diguanylate cyclase activity
YZOS03_13330	COG2203	Gaf domain
YZOS03_13380	COG2885	chlorophyll binding
YZOS03_13430	COG1254	Belongs to the acylphosphatase family
YZOS03_13440	COG2920	part of a sulfur-relay system
YZOS03_13460	COG0670	Belongs to the BI1 family
YZOS03_13470	COG1126	abc transporter atp-binding protein
YZOS03_13480	COG0765	amino acid transport
YZOS03_13490	COG4597	amino acid ABC transporter
YZOS03_13500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
YZOS03_13520	COG1666	GTP binding
YZOS03_13530	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
YZOS03_13580	COG3008	intermembrane lipid transfer
YZOS03_13590	COG2995	paraquat-inducible protein a
YZOS03_13600	COG1132	(ABC) transporter
YZOS03_13610	COG1956	GAF domain-containing protein
YZOS03_13620	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
YZOS03_13650	COG0308	aminopeptidase N
YZOS03_13660	COG2902	Dehydrogenase
YZOS03_13670	COG0167	dihydroorotate dehydrogenase activity
YZOS03_13690	COG0116	Belongs to the methyltransferase superfamily
YZOS03_13690	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
YZOS03_13710	COG0488	(ABC) transporter
YZOS03_13740	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
YZOS03_13750	COG1067	ATP-dependent peptidase activity
YZOS03_13760	COG3120	sequence-specific DNA binding
YZOS03_13810	COG4128	Pfam Zonular occludens toxin
YZOS03_14170	COG2205	protein histidine kinase activity
YZOS03_14170	COG0784	Response regulator, receiver
YZOS03_14200	COG3278	Belongs to the heme-copper respiratory oxidase family
YZOS03_14230	COG2010	Cytochrome c
YZOS03_14250	COG2217	Heavy metal translocating P-type atpase
YZOS03_14280	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
YZOS03_14290	COG0589	response to stress
YZOS03_14340	COG3842	ATPase activity
YZOS03_14360	COG1177	transmembrane transport
YZOS03_14380	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
YZOS03_14390	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
YZOS03_14410	COG0004	ammonium transporteR
YZOS03_14460	COG0437	4 iron, 4 sulfur cluster binding
YZOS03_14470	COG3383	formate dehydrogenase (NAD+) activity
YZOS03_14470	COG0243	molybdopterin cofactor binding
YZOS03_14490	COG3381	protein complex oligomerization
YZOS03_14530	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
YZOS03_14540	COG0488	(ABC) transporter
YZOS03_14550	COG4191	Histidine kinase
YZOS03_14560	COG2204	response regulator
YZOS03_14590	COG3842	ATPase activity
YZOS03_14600	COG0746	molybdenum cofactor guanylyltransferase activity
YZOS03_14610	COG0303	'Molybdopterin
YZOS03_14630	COG1940	carbohydrate kinase activity
YZOS03_14640	COG3148	PFAM DTW domain containing protein
YZOS03_14700	COG0791	NLP P60 protein
YZOS03_14720	COG3706	GGDEF domain
YZOS03_14740	COG3001	Fructosamine kinase
YZOS03_14750	COG3001	Fructosamine kinase
YZOS03_14770	COG0307	riboflavin synthase, alpha
YZOS03_14780	COG0534	Mate efflux family protein
YZOS03_14800	COG1793	dna ligase
YZOS03_14860	COG2204	response regulator
YZOS03_14890	COG0438	transferase activity, transferring glycosyl groups
YZOS03_14960	COG0438	transferase activity, transferring glycosyl groups
YZOS03_14970	COG1215	transferase activity, transferring glycosyl groups
YZOS03_14980	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
YZOS03_15000	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
YZOS03_15030	COG1643	Atp-dependent helicase
YZOS03_15040	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
YZOS03_15130	COG0443	Heat shock 70 kDa protein
YZOS03_15140	COG0443	Heat shock 70 kDa protein
YZOS03_15190	COG0583	DNA-binding transcription factor activity
YZOS03_15230	COG1132	(ABC) transporter
YZOS03_15240	COG1132	(ABC) transporter
YZOS03_15250	COG1132	(ABC) transporter
YZOS03_15270	COG4774	siderophore transport
YZOS03_15290	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
YZOS03_15300	COG1120	ATPase activity
YZOS03_15330	COG0814	amino acid
YZOS03_15350	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
YZOS03_15370	COG0861	Integral membrane protein TerC family
YZOS03_15390	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
YZOS03_15400	COG1328	CTP reductase activity
YZOS03_15440	COG3300	MHYT domain
YZOS03_15440	COG5001	Diguanylate cyclase
YZOS03_15470	COG0471	metal ion transport
YZOS03_15520	COG4702	Belongs to the UPF0303 family
YZOS03_15530	COG0673	inositol 2-dehydrogenase activity
YZOS03_15540	COG1349	DNA-binding transcription factor activity
YZOS03_15570	COG1538	Outer membrane efflux protein
YZOS03_15630	COG3119	arylsulfatase activity
YZOS03_15660	COG0641	radical SAM
YZOS03_15700	COG3119	arylsulfatase activity
YZOS03_15710	COG0527	aspartate kinase activity
YZOS03_15720	COG0662	Cupin 2, conserved barrel domain protein
YZOS03_15730	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
YZOS03_15740	COG0456	acetyltransferase
YZOS03_15750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
YZOS03_15790	COG4176	ABC-type proline glycine betaine transport system permease component
YZOS03_15800	COG2113	Glycine betaine
YZOS03_15810	COG1368	sulfuric ester hydrolase activity
YZOS03_15860	COG1115	amino acid carrier protein
YZOS03_15880	COG1280	lysine exporter protein (LysE YggA)
YZOS03_15890	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
YZOS03_15900	COG1560	Kdo2-lipid A biosynthetic process
YZOS03_15930	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
YZOS03_15940	COG3063	Type IV pilus biogenesis stability protein PilW
YZOS03_16020	COG2315	Protein conserved in bacteria
YZOS03_16030	COG1846	Transcriptional regulator
YZOS03_16050	COG2200	EAL domain
YZOS03_16060	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
YZOS03_16070	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_16080	COG2957	Belongs to the agmatine deiminase family
YZOS03_16100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
YZOS03_16110	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_16120	COG1917	Cupin 2, conserved barrel domain protein
YZOS03_16120	COG1396	sequence-specific DNA binding
YZOS03_16130	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
YZOS03_16140	COG0174	glutamine synthetase
YZOS03_16150	COG1757	Na H antiporter
YZOS03_16180	COG1742	UPF0060 membrane protein
YZOS03_16230	COG3755	Protein conserved in bacteria
YZOS03_16320	COG0307	riboflavin synthase, alpha
YZOS03_16340	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_16660	COG1783	phage Terminase large subunit
YZOS03_16820	COG4221	oxidoreductase activity
YZOS03_16830	COG2207	Transcriptional regulator
YZOS03_17010	COG0625	glutathione transferase activity
YZOS03_17030	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
YZOS03_17050	COG2195	Cleaves the N-terminal amino acid of tripeptides
YZOS03_17070	COG0601	transmembrane transport
YZOS03_17080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
YZOS03_17120	COG3291	Pkd domain containing protein
YZOS03_17140	COG1177	transmembrane transport
YZOS03_17160	COG3842	ATPase activity
YZOS03_17170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
YZOS03_17180	COG2423	ornithine cyclodeaminase activity
YZOS03_17210	COG3938	Belongs to the proline racemase family
YZOS03_17280	COG1451	nucleotide metabolic process
YZOS03_17300	COG0583	DNA-binding transcription factor activity
YZOS03_17350	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
YZOS03_17360	COG4139	cobalamin transport
YZOS03_17370	COG2988	succinylglutamate desuccinylase activity
YZOS03_17410	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
YZOS03_17420	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
YZOS03_17430	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
YZOS03_17440	COG0702	epimerase
YZOS03_17450	COG1823	symporter activity
YZOS03_17460	COG2925	Exonuclease
YZOS03_17470	COG1380	Effector of murein hydrolase LrgA
YZOS03_17480	COG1346	cytolysis
YZOS03_17490	COG0295	cytidine deaminase activity
YZOS03_17500	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
YZOS03_17510	COG0500	methyltransferase
YZOS03_17530	COG0776	regulation of translation
YZOS03_17550	COG0072	phenylalanine-tRNA ligase activity
YZOS03_17550	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
YZOS03_17560	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
YZOS03_17640	COG0393	Putative heavy-metal-binding
YZOS03_17660	COG0291	Belongs to the bacterial ribosomal protein bL35 family
YZOS03_17680	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
YZOS03_17710	COG2188	Transcriptional regulator
YZOS03_17720	COG1228	amidohydrolase
YZOS03_17730	COG0010	Belongs to the arginase family
YZOS03_17740	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
YZOS03_17750	COG2986	histidine ammonia-lyase
YZOS03_17780	COG0247	lactate metabolic process
YZOS03_17780	COG0277	FAD linked oxidase domain protein
YZOS03_17850	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
YZOS03_17890	COG1643	Atp-dependent helicase
YZOS03_17900	COG0281	malic enzyme
YZOS03_17910	COG2949	membrane
YZOS03_17920	COG0471	metal ion transport
YZOS03_17970	COG0492	ferredoxin-NADP+ reductase activity
YZOS03_17980	COG4988	ABC transporter
YZOS03_17990	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
YZOS03_18010	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
YZOS03_18030	COG4191	Histidine kinase
YZOS03_18030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
YZOS03_18060	COG3070	regulator of competence-specific genes
YZOS03_18080	COG2431	L-lysine efflux transmembrane transporter activity
YZOS03_18100	COG0076	glutamate decarboxylase activity
YZOS03_18110	COG1737	Transcriptional regulator
YZOS03_18140	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
YZOS03_18150	COG2985	domain, Protein
YZOS03_18150	COG3273	potassium ion transport
YZOS03_18160	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
YZOS03_18170	COG1960	acyl-CoA dehydrogenase activity
YZOS03_18190	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
YZOS03_18230	COG0534	Mate efflux family protein
YZOS03_18240	COG0702	epimerase
YZOS03_18260	COG2814	Major facilitator Superfamily
YZOS03_18280	COG1187	pseudouridine synthase activity
YZOS03_18290	COG1061	Type III restriction enzyme res subunit
YZOS03_18330	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
YZOS03_18380	COG4134	Bacterial extracellular solute-binding protein
YZOS03_18390	COG4135	transport system, permease component
YZOS03_18400	COG4136	ATPase activity
YZOS03_18410	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
YZOS03_18430	COG3604	Transcriptional regulator
YZOS03_18440	COG1151	hydroxylamine reductase activity
YZOS03_18450	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
YZOS03_18470	COG0564	pseudouridine synthase activity
YZOS03_18480	COG0733	neurotransmitter:sodium symporter activity
YZOS03_18500	COG0626	cystathionine gamma-synthase activity
YZOS03_18510	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
YZOS03_18520	COG5380	lipid catabolic process
YZOS03_18530	COG2818	Glycosylase
YZOS03_18550	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_18580	COG1983	PspC domain protein
YZOS03_18600	COG1842	Phage shock protein A
YZOS03_18610	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
YZOS03_18640	COG4171	peptide transport system, permease
YZOS03_18660	COG4172	Belongs to the ABC transporter superfamily
YZOS03_18680	COG1227	inorganic diphosphatase activity
YZOS03_18710	COG0243	molybdopterin cofactor binding
YZOS03_18720	COG3005	denitrification pathway
YZOS03_18730	COG4459	periplasmic nitrate reductase
YZOS03_18740	COG0390	transport system, permease component
YZOS03_18760	COG2116	formate transmembrane transporter activity
YZOS03_18810	COG1434	Gram-negative-bacterium-type cell wall biogenesis
YZOS03_18820	COG1435	thymidine kinase activity
YZOS03_18830	COG0215	cysteine-tRNA ligase activity
YZOS03_18840	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
YZOS03_18850	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
YZOS03_18860	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
YZOS03_18870	COG3012	SEC-C Motif Domain Protein
YZOS03_18880	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
YZOS03_18880	COG0140	phosphoribosyl-ATP diphosphatase activity
YZOS03_18900	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
YZOS03_18910	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
YZOS03_18920	COG0131	Imidazoleglycerol-phosphate dehydratase
YZOS03_18920	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
YZOS03_18940	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
YZOS03_18960	COG1757	Na H antiporter
YZOS03_18980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
YZOS03_19010	COG2915	High frequency lysogenization protein hflD homolog
YZOS03_19020	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
YZOS03_19040	COG2268	Band 7 protein
YZOS03_19060	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
YZOS03_19090	COG0300	oxidoreductase activity
YZOS03_19130	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
YZOS03_19170	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
YZOS03_19180	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
YZOS03_19200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
YZOS03_19220	COG1674	ftsk spoiiie
YZOS03_19240	COG0686	Belongs to the AlaDH PNT family
YZOS03_19260	COG0583	DNA-binding transcription factor activity
YZOS03_19310	COG3568	Endonuclease Exonuclease Phosphatase
YZOS03_19360	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_19370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_19410	COG1271	oxidase subunit
YZOS03_19420	COG1294	oxidase, subunit
YZOS03_19440	COG0784	Response regulator, receiver
YZOS03_19440	COG5002	protein histidine kinase activity
YZOS03_19460	COG0754	glutathionylspermidine amidase activity
YZOS03_19480	COG3766	membrane
YZOS03_19500	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
YZOS03_19510	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
YZOS03_19520	COG2885	chlorophyll binding
YZOS03_19530	COG0823	Involved in the tonB-independent uptake of proteins
YZOS03_19560	COG0811	peptide transport
YZOS03_19570	COG0824	Thioesterase
YZOS03_19590	COG1294	oxidase, subunit
YZOS03_19600	COG1271	oxidase subunit
YZOS03_19610	COG2255	four-way junction helicase activity
YZOS03_19620	COG0632	four-way junction helicase activity
YZOS03_19630	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
YZOS03_19640	COG0217	transcriptional regulatory protein
YZOS03_19670	COG1801	Protein of unknown function DUF72
YZOS03_19690	COG0500	methyltransferase
YZOS03_19700	COG0189	ligase activity
YZOS03_19700	COG4067	protein conserved in archaea
YZOS03_19740	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
YZOS03_19750	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
YZOS03_19760	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
YZOS03_19770	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
YZOS03_19780	COG1434	Gram-negative-bacterium-type cell wall biogenesis
YZOS03_19790	COG0745	RESPONSE REGULATOR receiver
YZOS03_19800	COG3381	protein complex oligomerization
YZOS03_19810	COG1609	Transcriptional regulator
YZOS03_19820	COG3070	regulator of competence-specific genes
YZOS03_19860	COG0297	glycogen (starch) synthase activity
YZOS03_19870	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
YZOS03_19880	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
YZOS03_19920	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
YZOS03_19930	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
YZOS03_19940	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
YZOS03_19950	COG0542	response to heat
YZOS03_19960	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
YZOS03_19980	COG1278	Cold shock
YZOS03_20000	COG1187	pseudouridine synthase activity
YZOS03_20010	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
YZOS03_20020	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
YZOS03_20030	COG1199	ATP-dependent helicase activity
YZOS03_20040	COG0730	response to heat
YZOS03_20050	COG3923	Primosomal replication protein n
YZOS03_20070	COG0708	Exodeoxyribonuclease III
YZOS03_20150	COG1882	Formate acetyltransferase
YZOS03_20170	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
YZOS03_20190	COG3013	Belongs to the UPF0304 family
YZOS03_20200	COG2766	serine protein kinase
YZOS03_20210	COG2718	Belongs to the UPF0229 family
YZOS03_20220	COG2719	SpoVR family
YZOS03_20260	COG1132	(ABC) transporter
YZOS03_20270	COG0658	competence protein
YZOS03_20270	COG2333	competence protein COMEC
YZOS03_20280	COG4591	ABC-type transport system involved in lipoprotein release permease component
YZOS03_20290	COG1136	(ABC) transporter
YZOS03_20300	COG4591	ABC-type transport system involved in lipoprotein release permease component
YZOS03_20320	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
YZOS03_20350	COG1252	NADH dehydrogenase
YZOS03_20360	COG3150	esterase
YZOS03_20410	COG0537	adenosine 5'-monophosphoramidase activity
YZOS03_20460	COG0516	GMP reductase activity
YZOS03_20460	COG0517	IMP dehydrogenase activity
YZOS03_20470	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
YZOS03_20510	COG3126	Type III secretion system lipoprotein chaperone (YscW)
YZOS03_20520	COG1946	Acyl-CoA thioesterase
YZOS03_20540	COG1522	sequence-specific DNA binding
YZOS03_20550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
YZOS03_20580	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_20590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_20620	COG0477	Major facilitator Superfamily
YZOS03_20630	COG2855	membrane
YZOS03_20670	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
YZOS03_20690	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
YZOS03_20700	COG1169	isochorismate synthase
YZOS03_20720	COG0436	Aminotransferase
YZOS03_20730	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
YZOS03_20750	COG0232	Belongs to the dGTPase family. Type 2 subfamily
YZOS03_20780	COG1555	photosystem II stabilization
YZOS03_20790	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
YZOS03_20800	COG0776	regulation of translation
YZOS03_20810	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
YZOS03_20820	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
YZOS03_20840	COG0544	peptidyl-prolyl cis-trans isomerase activity
YZOS03_20880	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
YZOS03_20890	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
YZOS03_20900	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
YZOS03_20910	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
YZOS03_20940	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
YZOS03_20950	COG0569	domain protein
YZOS03_20960	COG0513	Belongs to the DEAD box helicase family
YZOS03_21030	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
YZOS03_21040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
YZOS03_21070	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
YZOS03_21080	COG1216	Glycosyl transferase, family 2
YZOS03_21090	COG2986	histidine ammonia-lyase
YZOS03_21140	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
YZOS03_21160	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_21180	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
YZOS03_21190	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
YZOS03_21210	COG2951	lytic endotransglycosylase activity
YZOS03_21220	COG3100	YcgL domain-containing protein
YZOS03_21230	COG0850	regulation of cytokinetic process
YZOS03_21240	COG2894	cell division
YZOS03_21250	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
YZOS03_21260	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
YZOS03_21270	COG0318	PFAM AMP-dependent synthetase and ligase
YZOS03_21280	COG2267	carboxylic ester hydrolase activity
YZOS03_21290	COG3065	identical protein binding
YZOS03_21310	COG1214	PFAM Peptidase M22, glycoprotease
YZOS03_21320	COG1199	ATP-dependent helicase activity
YZOS03_21340	COG0788	formyltetrahydrofolate deformylase activity
YZOS03_21370	COG3102	Protein conserved in bacteria
YZOS03_21380	COG0018	arginyl-trna synthetase
YZOS03_21440	COG1918	ferrous iron import across plasma membrane
YZOS03_21450	COG4977	sequence-specific DNA binding
YZOS03_21470	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
YZOS03_21480	COG1121	(ABC) transporter
YZOS03_21490	COG1108	ABC-type Mn2 Zn2 transport systems permease components
YZOS03_21510	COG0045	succinate-CoA ligase (ADP-forming) activity
YZOS03_21520	COG0508	dehydrogenase complex catalyzes the overall conversion of
YZOS03_21530	COG0567	Dehydrogenase, E1 component
YZOS03_21540	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
YZOS03_21550	COG1053	succinate dehydrogenase
YZOS03_21560	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
YZOS03_21590	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
YZOS03_21610	COG0033	Phosphoglucomutase
YZOS03_21620	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
YZOS03_21630	COG0596	Alpha beta hydrolase
YZOS03_21650	COG0716	FMN binding
YZOS03_21670	COG0735	belongs to the Fur family
YZOS03_21680	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
YZOS03_21690	COG2190	(PTS) system
YZOS03_21690	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_21690	COG1263	PTS System
YZOS03_21700	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
YZOS03_21710	COG1940	carbohydrate kinase activity
YZOS03_21710	COG1846	Transcriptional regulator
YZOS03_21720	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
YZOS03_21720	COG4651	solute:proton antiporter activity
YZOS03_21730	COG0367	asparagine synthase
YZOS03_21740	COG0250	Participates in transcription elongation, termination and antitermination
YZOS03_21750	COG3104	oligopeptide transport
YZOS03_21760	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
YZOS03_21780	COG0326	Molecular chaperone. Has ATPase activity
YZOS03_21790	COG3710	Transcriptional regulator
YZOS03_21830	COG0622	Phosphoesterase
YZOS03_21880	COG1090	epimerase
YZOS03_21890	COG0300	oxidoreductase activity
YZOS03_21900	COG3118	belongs to the thioredoxin family
YZOS03_21910	COG3118	belongs to the thioredoxin family
YZOS03_21910	COG0457	Tetratricopeptide repeat
YZOS03_21920	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
YZOS03_21930	COG1215	transferase activity, transferring glycosyl groups
YZOS03_21940	COG1215	transferase activity, transferring glycosyl groups
YZOS03_21950	COG1192	Involved in chromosome partitioning
YZOS03_21990	COG2194	sulfuric ester hydrolase activity
YZOS03_22000	COG0330	HflC and HflK could
YZOS03_22050	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
YZOS03_22060	COG3115	cell septum assembly
YZOS03_22070	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
YZOS03_22080	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
YZOS03_22090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
YZOS03_22100	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
YZOS03_22110	COG2190	(PTS) system
YZOS03_22120	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_22130	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_22140	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_22150	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_22170	COG1705	Flagellar rod assembly protein muramidase FlgJ
YZOS03_22170	COG3951	Flagellar rod assembly protein muramidase FlgJ
YZOS03_22180	COG1706	bacterial-type flagellum-dependent cell motility
YZOS03_22190	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
YZOS03_22210	COG4787	bacterial-type flagellum-dependent cell motility
YZOS03_22220	COG1749	Flagellar hook protein flgE
YZOS03_22240	COG1558	bacterial-type flagellum-dependent cell motility
YZOS03_22250	COG1815	bacterial-type flagellum-dependent cell motility
YZOS03_22260	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
YZOS03_22270	COG0835	chemotaxis
YZOS03_22270	COG0784	Response regulator, receiver
YZOS03_22380	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
YZOS03_22400	COG2608	mercury ion transmembrane transporter activity
YZOS03_22400	COG2217	Heavy metal translocating P-type atpase
YZOS03_22460	COG2840	Smr protein MutS2
YZOS03_22470	COG1187	pseudouridine synthase activity
YZOS03_22480	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
YZOS03_22490	COG0737	Belongs to the 5'-nucleotidase family
YZOS03_22500	COG0737	Belongs to the 5'-nucleotidase family
YZOS03_22510	COG2877	3-deoxy-8-phosphooctulonate synthase activity
YZOS03_22520	COG2912	Transglutaminase-like superfamily
YZOS03_22530	COG3094	Invasion gene expression up-regulator, SirB
YZOS03_22540	COG2890	protein-(glutamine-N5) methyltransferase activity
YZOS03_22560	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
YZOS03_22570	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
YZOS03_22580	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
YZOS03_22590	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
YZOS03_22600	COG0193	aminoacyl-tRNA hydrolase activity
YZOS03_22610	COG0012	GTP binding
YZOS03_22620	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
YZOS03_22630	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
YZOS03_22640	COG1702	phosphate starvation-inducible protein PhoH
YZOS03_22650	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
YZOS03_22660	COG4535	Mg2 and Co2 transporter CorC
YZOS03_22670	COG0815	Transfers the fatty acyl group on membrane lipoproteins
YZOS03_22680	COG2888	peptidyl-tyrosine sulfation
YZOS03_22690	COG0495	leucyl-tRNA aminoacylation
YZOS03_22700	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
YZOS03_22710	COG1466	dna polymerase III delta subunit
YZOS03_22720	COG0799	negative regulation of ribosome biogenesis
YZOS03_22730	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
YZOS03_22740	COG0768	penicillin binding
YZOS03_22750	COG0772	Belongs to the SEDS family
YZOS03_22760	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
YZOS03_22770	COG1686	Belongs to the peptidase S11 family
YZOS03_22790	COG0321	lipoyl(octanoyl) transferase activity
YZOS03_22800	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
YZOS03_22810	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
YZOS03_22820	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
YZOS03_22850	COG0366	Alpha amylase catalytic
YZOS03_22860	COG1263	PTS System
YZOS03_22860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_22880	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
YZOS03_22890	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
YZOS03_22900	COG2011	ABC-type metal ion transport system permease component
YZOS03_22910	COG1464	Belongs to the NlpA lipoprotein family
YZOS03_22920	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
YZOS03_22940	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
YZOS03_22940	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
YZOS03_22970	COG1611	Belongs to the LOG family
YZOS03_22980	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
YZOS03_23000	COG2363	Small membrane protein
YZOS03_23020	COG0583	DNA-binding transcription factor activity
YZOS03_23030	COG0301	tRNA thio-modification
YZOS03_23030	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
YZOS03_23050	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
YZOS03_23060	COG1722	exodeoxyribonuclease VII activity
YZOS03_23070	COG0142	geranyltranstransferase activity
YZOS03_23080	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
YZOS03_23090	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
YZOS03_23100	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
YZOS03_23120	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
YZOS03_23160	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
YZOS03_23160	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
YZOS03_23170	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
YZOS03_23180	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
YZOS03_23190	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
YZOS03_23210	COG1073	alpha beta
YZOS03_23220	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
YZOS03_23230	COG2252	PERMEase
YZOS03_23240	COG2195	Cleaves the N-terminal amino acid of tripeptides
YZOS03_23270	COG1629	transport
YZOS03_23290	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
YZOS03_23290	COG0047	phosphoribosylformylglycinamidine synthase activity
YZOS03_23300	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
YZOS03_23330	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
YZOS03_23390	COG0484	heat shock protein binding
YZOS03_23410	COG1301	dicarboxylic acid transport
YZOS03_23420	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
YZOS03_23430	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
YZOS03_23450	COG0497	DNA recombination
YZOS03_23470	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
YZOS03_23480	COG2914	Belongs to the UPF0125 (RnfH) family
YZOS03_23490	COG2867	negative regulation of translational initiation
YZOS03_23500	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
YZOS03_23510	COG0582	viral genome integration into host DNA
YZOS03_23520	COG0582	viral genome integration into host DNA
YZOS03_23540	COG2189	Belongs to the N(4) N(6)-methyltransferase family
YZOS03_23570	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
YZOS03_23600	COG0328	RNA-DNA hybrid ribonuclease activity
YZOS03_23610	COG2003	Belongs to the UPF0758 family
YZOS03_23740	COG0583	DNA-binding transcription factor activity
YZOS03_23750	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
YZOS03_23750	COG3153	acetyltransferase
YZOS03_23790	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
YZOS03_23800	COG2873	o-acetylhomoserine
YZOS03_23830	COG1115	amino acid carrier protein
YZOS03_23840	COG1584	GPR1 FUN34 yaaH family protein
YZOS03_23860	COG1757	Na H antiporter
YZOS03_23870	COG0518	GMP synthase (glutamine-hydrolyzing) activity
YZOS03_23870	COG0519	Catalyzes the synthesis of GMP from XMP
YZOS03_23880	COG0516	GMP reductase activity
YZOS03_23880	COG0517	IMP dehydrogenase activity
YZOS03_23920	COG1160	GTP binding
YZOS03_23930	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
YZOS03_23940	COG2976	Protein conserved in bacteria
YZOS03_23950	COG0124	histidyl-tRNA synthetase
YZOS03_23960	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
YZOS03_23990	COG0105	UTP biosynthetic process
YZOS03_24010	COG2975	iron-sulfur cluster assembly
YZOS03_24020	COG0633	Ferredoxin
YZOS03_24030	COG0443	Heat shock 70 kDa protein
YZOS03_24060	COG0822	iron-sulfur transferase activity
YZOS03_24070	COG1104	cysteine desulfurase activity
YZOS03_24090	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
YZOS03_24100	COG0483	inositol monophosphate 1-phosphatase activity
YZOS03_24110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
YZOS03_24120	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
YZOS03_24130	COG1862	Preprotein translocase
YZOS03_24150	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
YZOS03_24170	COG0517	IMP dehydrogenase activity
YZOS03_24190	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
YZOS03_24200	COG0583	DNA-binding transcription factor activity
YZOS03_24210	COG0450	alkyl hydroperoxide reductase
YZOS03_24220	COG3142	Participates in the control of copper homeostasis
YZOS03_24240	COG0704	Plays a role in the regulation of phosphate uptake
YZOS03_24250	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
YZOS03_24260	COG0581	inorganic phosphate transmembrane transporter activity
YZOS03_24270	COG0573	inorganic phosphate transmembrane transporter activity
YZOS03_24280	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
YZOS03_24290	COG0248	Ppx GppA phosphatase
YZOS03_24310	COG5002	protein histidine kinase activity
YZOS03_24320	COG0745	RESPONSE REGULATOR receiver
YZOS03_24330	COG0745	RESPONSE REGULATOR receiver
YZOS03_24340	COG2974	May be involved in recombination
YZOS03_24350	COG0826	peptidase U32
YZOS03_24360	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
YZOS03_24400	COG0542	response to heat
YZOS03_24420	COG0564	pseudouridine synthase activity
YZOS03_24430	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
YZOS03_24450	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
YZOS03_24460	COG0077	Prephenate dehydratase
YZOS03_24460	COG1605	Chorismate mutase
YZOS03_24470	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
YZOS03_24480	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
YZOS03_24500	COG0488	(ABC) transporter
YZOS03_24520	COG0739	heme binding
YZOS03_24530	COG0287	Prephenate dehydrogenase
YZOS03_24530	COG1605	Chorismate mutase
YZOS03_24540	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
YZOS03_24550	COG1472	Belongs to the glycosyl hydrolase 3 family
YZOS03_24560	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
YZOS03_24600	COG1966	Carbon starvation protein
YZOS03_24610	COG3275	phosphorelay sensor kinase activity
YZOS03_24620	COG3279	Response regulator of the LytR AlgR family
YZOS03_24640	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
YZOS03_24650	COG1047	Peptidyl-prolyl cis-trans
YZOS03_24680	COG0196	riboflavin kinase activity
YZOS03_24690	COG0728	peptidoglycan biosynthetic process
YZOS03_24700	COG0268	Binds directly to 16S ribosomal RNA
YZOS03_24710	COG0640	Transcriptional regulator
YZOS03_24720	COG0583	DNA-binding transcription factor activity
YZOS03_24730	COG1283	sodium-dependent phosphate transmembrane transporter activity
YZOS03_24750	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
YZOS03_24760	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
YZOS03_24770	COG0730	response to heat
YZOS03_24820	COG0667	Aldo Keto reductase
YZOS03_24840	COG2204	response regulator
YZOS03_24860	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
YZOS03_24870	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
YZOS03_24880	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
YZOS03_24890	COG4974	Belongs to the 'phage' integrase family
YZOS03_24900	COG0716	FMN binding
YZOS03_24920	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
YZOS03_24930	COG0513	Belongs to the DEAD box helicase family
YZOS03_24940	COG3022	response to hydroperoxide
YZOS03_24950	COG1115	amino acid carrier protein
YZOS03_24980	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YZOS03_24990	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
YZOS03_25000	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
YZOS03_25020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
YZOS03_25030	COG0083	homoserine kinase activity
YZOS03_25060	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
YZOS03_25070	COG0745	RESPONSE REGULATOR receiver
YZOS03_25090	COG0784	Response regulator, receiver
YZOS03_25090	COG5002	protein histidine kinase activity
YZOS03_25090	COG2198	Histidine kinase
YZOS03_25100	COG0784	Response regulator, receiver
YZOS03_25100	COG2198	Histidine kinase
YZOS03_25100	COG5002	protein histidine kinase activity
YZOS03_25110	COG2203	Gaf domain
YZOS03_25110	COG3706	GGDEF domain
YZOS03_25110	COG4251	negative regulation of phosphorylation
YZOS03_25110	COG5001	Diguanylate cyclase
YZOS03_25120	COG1242	4 iron, 4 sulfur cluster binding
YZOS03_25130	COG0067	glutamate synthase
YZOS03_25130	COG0069	glutamate synthase activity
YZOS03_25130	COG0070	glutamate synthase
YZOS03_25150	COG0067	glutamate synthase
YZOS03_25150	COG0069	glutamate synthase activity
YZOS03_25150	COG0070	glutamate synthase
YZOS03_25160	COG0493	'glutamate synthase
YZOS03_25180	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
YZOS03_25210	COG2860	membrane
YZOS03_25220	COG0583	DNA-binding transcription factor activity
YZOS03_25230	COG0730	response to heat
YZOS03_25260	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
YZOS03_25270	COG0505	Belongs to the CarA family
YZOS03_25290	COG0494	nUDIX hydrolase
YZOS03_25300	COG0653	protein targeting
YZOS03_25320	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
YZOS03_25330	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
YZOS03_25340	COG0849	cell division
YZOS03_25350	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
YZOS03_25380	COG0772	Belongs to the SEDS family
YZOS03_25390	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
YZOS03_25400	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YZOS03_25410	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
YZOS03_25420	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
YZOS03_25430	COG0768	penicillin binding
YZOS03_25440	COG0768	penicillin binding
YZOS03_25450	COG3116	cell division
YZOS03_25470	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
YZOS03_25500	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
YZOS03_25510	COG2823	Periplasmic or secreted lipoprotein
YZOS03_25520	COG2969	positive regulation of protein catabolic process
YZOS03_25530	COG0625	glutathione transferase activity
YZOS03_25540	COG2857	Cytochrome c1
YZOS03_25550	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
YZOS03_25560	COG0723	plastoquinol--plastocyanin reductase activity
YZOS03_25570	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
YZOS03_25590	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
YZOS03_25600	COG3105	Protein conserved in bacteria
YZOS03_25620	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
YZOS03_25630	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
YZOS03_25650	COG3150	esterase
YZOS03_25670	COG3151	Protein conserved in bacteria
YZOS03_25680	COG0494	nUDIX hydrolase
YZOS03_25690	COG1538	Outer membrane efflux protein
YZOS03_25700	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
YZOS03_25700	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
YZOS03_25710	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
YZOS03_25720	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
YZOS03_25750	COG3025	triphosphatase activity
YZOS03_25760	COG1392	Phosphate transport regulator
YZOS03_25770	COG0306	phosphate transporter
YZOS03_25780	COG4991	sh3 domain protein
YZOS03_25790	COG0405	Gamma-glutamyltransferase
YZOS03_25810	COG3409	Peptidoglycan-binding domain 1 protein
YZOS03_25810	COG3267	Type II secretory pathway component ExeA
YZOS03_25830	COG1968	undecaprenyl-diphosphatase activity
YZOS03_25840	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YZOS03_25850	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
YZOS03_25860	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
YZOS03_25870	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
YZOS03_25880	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
YZOS03_25890	COG0828	Belongs to the bacterial ribosomal protein bS21 family
YZOS03_25900	COG1610	YqeY-like protein
YZOS03_25910	COG0358	DNA primase activity
YZOS03_25970	COG2213	PTS system mannitol-specific
YZOS03_25970	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
YZOS03_25990	COG3722	fumarate hydratase activity
YZOS03_26020	COG1461	Dihydroxyacetone kinase
YZOS03_26030	COG1461	Dihydroxyacetone kinase
YZOS03_26040	COG2376	Dihydroxyacetone kinase
YZOS03_26060	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
YZOS03_26070	COG1349	DNA-binding transcription factor activity
YZOS03_26080	COG0469	pyruvate kinase activity
YZOS03_26110	COG0440	acetolactate synthase activity
YZOS03_26120	COG0028	Belongs to the TPP enzyme family
YZOS03_26130	COG1022	Amp-dependent synthetase and ligase
YZOS03_26140	COG0583	DNA-binding transcription factor activity
YZOS03_26180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
YZOS03_26190	COG0473	3-isopropylmalate dehydrogenase activity
YZOS03_26230	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
YZOS03_26240	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
YZOS03_26250	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
YZOS03_26260	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
YZOS03_26270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
YZOS03_26280	COG2967	ApaG domain
YZOS03_26290	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
YZOS03_26320	COG2966	Psort location CytoplasmicMembrane, score
YZOS03_26330	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
YZOS03_26350	COG0261	This protein binds to 23S rRNA in the presence of protein L20
YZOS03_26360	COG0142	geranyltranstransferase activity
YZOS03_26400	COG2358	TRAP transporter, solute receptor (TAXI family
YZOS03_26430	COG1902	pentaerythritol trinitrate reductase activity
YZOS03_26440	COG0583	DNA-binding transcription factor activity
YZOS03_26450	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
YZOS03_26460	COG1178	ABC-type Fe3 transport system permease component
YZOS03_26470	COG4143	(ABC) transporter
YZOS03_26480	COG0163	prenyltransferase activity
YZOS03_26490	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
YZOS03_26500	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
YZOS03_26510	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
YZOS03_26530	COG2105	PFAM AIG2 family protein
YZOS03_26540	COG2911	Protein conserved in bacteria
YZOS03_26550	COG0729	surface antigen
YZOS03_26560	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
YZOS03_26580	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
YZOS03_26600	COG4181	ATPase activity
YZOS03_26640	COG0529	Catalyzes the synthesis of activated sulfate
YZOS03_26650	COG3273	potassium ion transport
YZOS03_26650	COG0471	metal ion transport
YZOS03_26660	COG2895	sulfate adenylyltransferase (ATP) activity
YZOS03_26670	COG0175	sulfate reduction
YZOS03_26680	COG1648	precorrin-2 dehydrogenase activity
YZOS03_26680	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
YZOS03_26710	COG0513	Belongs to the DEAD box helicase family
YZOS03_26720	COG2153	protein acetylation
YZOS03_26740	COG0545	Peptidyl-prolyl cis-trans isomerase
YZOS03_26770	COG0203	ribosomal protein L17
YZOS03_26780	COG0202	RNA polymerase activity
YZOS03_26800	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
YZOS03_26810	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
YZOS03_26820	COG0201	protein transport
YZOS03_26830	COG0200	Binds to the 23S rRNA
YZOS03_26840	COG1841	ribosomal large subunit assembly
YZOS03_26870	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
YZOS03_26880	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YZOS03_26900	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
YZOS03_26910	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
YZOS03_26930	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
YZOS03_26940	COG0255	Belongs to the universal ribosomal protein uL29 family
YZOS03_26960	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
YZOS03_26970	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
YZOS03_26980	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YZOS03_26990	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
YZOS03_27010	COG0088	Forms part of the polypeptide exit tunnel
YZOS03_27020	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
YZOS03_27040	COG0254	rRNA binding
YZOS03_27050	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
YZOS03_27060	COG1609	Transcriptional regulator
YZOS03_27080	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
YZOS03_27090	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
YZOS03_27100	COG1575	Belongs to the MenA family. Type 1 subfamily
YZOS03_27110	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
YZOS03_27130	COG1494	fructose-1,6-bisphosphatase
YZOS03_27190	COG0149	triose-phosphate isomerase activity
YZOS03_27300	COG1216	Glycosyl transferase, family 2
YZOS03_27330	COG0812	UDP-N-acetylmuramate dehydrogenase activity
YZOS03_27350	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YZOS03_27360	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
YZOS03_27370	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
YZOS03_27380	COG1215	transferase activity, transferring glycosyl groups
YZOS03_27490	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
YZOS03_27570	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
YZOS03_27590	COG1560	Kdo2-lipid A biosynthetic process
YZOS03_27620	COG0859	PFAM glycosyl transferase family 9
YZOS03_27630	COG1519	Transferase
YZOS03_27640	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
YZOS03_27720	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
YZOS03_27740	COG3642	lipopolysaccharide core region biosynthetic process
YZOS03_27750	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
YZOS03_27760	COG0859	PFAM glycosyl transferase family 9
YZOS03_27770	COG0463	Glycosyl transferase, family 2
YZOS03_27800	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
YZOS03_27850	COG2003	Belongs to the UPF0758 family
YZOS03_27870	COG0840	transmembrane signaling receptor activity
YZOS03_27880	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
YZOS03_27890	COG1309	transcriptional regulator
YZOS03_27900	COG1560	Kdo2-lipid A biosynthetic process
YZOS03_27910	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
YZOS03_27920	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
YZOS03_27930	COG1561	YicC-like family, N-terminal region
YZOS03_27940	COG1561	YicC-like family, N-terminal region
YZOS03_27960	COG4608	Belongs to the ABC transporter superfamily
YZOS03_27970	COG0444	Belongs to the ABC transporter superfamily
YZOS03_27980	COG0747	negative chemotaxis
YZOS03_27990	COG4239	(ABC) transporter, permease
YZOS03_28000	COG4174	ABC transporter (Permease)
YZOS03_28040	COG0811	peptide transport
YZOS03_28050	COG0848	biopolymer transport protein
YZOS03_28080	COG0194	GDP metabolic process
YZOS03_28090	COG1758	RNA polymerase activity
YZOS03_28100	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
YZOS03_28110	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
YZOS03_28120	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
YZOS03_28130	COG2233	PERMEase
YZOS03_28180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YZOS03_28210	COG2183	response to ionizing radiation
YZOS03_28240	COG1040	competence protein
YZOS03_28260	COG0494	nUDIX hydrolase
YZOS03_28270	COG1218	3'(2'),5'-bisphosphate nucleotidase
YZOS03_28290	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
YZOS03_28300	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
YZOS03_28310	COG3156	type II secretion system protein K
YZOS03_28320	COG4795	General secretion pathway protein
YZOS03_28330	COG2165	general secretion pathway protein
YZOS03_28340	COG2165	general secretion pathway protein
YZOS03_28350	COG2165	general secretion pathway protein
YZOS03_28360	COG1459	type II secretion system
YZOS03_28370	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
YZOS03_28390	COG3031	protein transport across the cell outer membrane
YZOS03_28400	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
YZOS03_28410	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
YZOS03_28420	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
YZOS03_28440	COG0456	acetyltransferase
YZOS03_28450	COG1490	D-aminoacyl-tRNA deacylase activity
YZOS03_28460	COG1295	ribonuclease BN
YZOS03_28480	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
YZOS03_28490	COG1217	gtp-binding protein TYPA
YZOS03_28500	COG0174	glutamine synthetase
YZOS03_28520	COG3852	Histidine kinase
YZOS03_28530	COG2204	response regulator
YZOS03_28550	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
YZOS03_28610	COG0218	Necessary for normal cell division and for the maintenance of normal septation
YZOS03_28620	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
YZOS03_28620	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
YZOS03_28630	COG0456	acetyltransferase
YZOS03_28650	COG0084	hydrolase, TatD family'
YZOS03_28660	COG0805	protein transport
YZOS03_28670	COG0805	protein transport
YZOS03_28680	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
YZOS03_28700	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
YZOS03_28710	COG3165	ubiquinone biosynthetic process from chorismate
YZOS03_28720	COG2226	methyltransferase
YZOS03_28730	COG1322	Protein conserved in bacteria
YZOS03_28760	COG0628	permease
YZOS03_28820	COG1597	lipid kinase activity
YZOS03_28880	COG2081	HI0933 family
YZOS03_28900	COG1528	Iron-storage protein
YZOS03_28910	COG0589	response to stress
YZOS03_28940	COG0742	ribosomal rna small subunit methyltransferase
YZOS03_28950	COG5001	Diguanylate cyclase
YZOS03_28950	COG5002	protein histidine kinase activity
YZOS03_28960	COG1522	sequence-specific DNA binding
YZOS03_28980	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
YZOS03_28990	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
YZOS03_29000	COG0583	DNA-binding transcription factor activity
YZOS03_29010	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
YZOS03_29020	COG0800	Aldolase
YZOS03_29030	COG2610	gluconate transmembrane transporter activity
YZOS03_29040	COG3265	gluconokinase activity
YZOS03_29050	COG0129	dihydroxy-acid dehydratase activity
YZOS03_29080	COG0583	DNA-binding transcription factor activity
YZOS03_29090	COG1609	Transcriptional regulator
YZOS03_29110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
YZOS03_29120	COG0601	transmembrane transport
YZOS03_29130	COG4166	transmembrane transport
YZOS03_29190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_29200	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_29210	COG2960	long-chain fatty acid transporting porin activity
YZOS03_29220	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
YZOS03_29230	COG0583	DNA-binding transcription factor activity
YZOS03_29240	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
YZOS03_29270	COG0408	coproporphyrinogen oxidase activity
YZOS03_29280	COG0009	L-threonylcarbamoyladenylate synthase
YZOS03_29290	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
YZOS03_29300	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
YZOS03_29310	COG0551	DNA topoisomerase type I activity
YZOS03_29320	COG2922	Belongs to the Smg family
YZOS03_29330	COG0758	DNA mediated transformation
YZOS03_29350	COG0242	peptide deformylase activity
YZOS03_29360	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
YZOS03_29370	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
YZOS03_29370	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
YZOS03_29380	COG0569	domain protein
YZOS03_29390	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
YZOS03_29410	COG1272	protein, Hemolysin III
YZOS03_29420	COG4326	sporulation control protein
YZOS03_29440	COG3084	Protein conserved in bacteria
YZOS03_29460	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
YZOS03_29470	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
YZOS03_29480	COG0204	Acyl-transferase
YZOS03_29510	COG0606	chelatase, subunit chli
YZOS03_29530	COG3978	acetolactate synthase activity
YZOS03_29540	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
YZOS03_29550	COG0129	dihydroxy-acid dehydratase activity
YZOS03_29570	COG0583	DNA-binding transcription factor activity
YZOS03_29580	COG2814	Major facilitator Superfamily
YZOS03_29600	COG0765	amino acid transport
YZOS03_29620	COG0355	proton-transporting ATP synthase activity, rotational mechanism
YZOS03_29630	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
YZOS03_29640	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
YZOS03_29650	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
YZOS03_29660	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
YZOS03_29670	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
YZOS03_29690	COG0356	it plays a direct role in the translocation of protons across the membrane
YZOS03_29700	COG3312	ion transport
YZOS03_29710	COG1475	DNA binding
YZOS03_29720	COG1192	Involved in chromosome partitioning
YZOS03_29730	COG0357	Ribosomal RNA small subunit methyltransferase G
YZOS03_29740	COG0445	tRNA wobble uridine modification
YZOS03_29750	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
YZOS03_29770	COG0706	membrane insertase activity
YZOS03_29780	COG0594	ribonuclease P activity
YZOS03_29800	COG1126	abc transporter atp-binding protein
YZOS03_29890	COG0803	Belongs to the bacterial solute-binding protein 9 family
YZOS03_29900	COG1121	(ABC) transporter
YZOS03_29910	COG1108	ABC-type Mn2 Zn2 transport systems permease components
YZOS03_29940	COG1770	oligopeptidase
YZOS03_29950	COG2814	Major facilitator Superfamily
YZOS03_29960	COG0010	Belongs to the arginase family
YZOS03_29970	COG1166	arginine decarboxylase activity
YZOS03_29990	COG0189	ligase activity
YZOS03_29990	COG4067	protein conserved in archaea
YZOS03_30000	COG0189	ligase activity
YZOS03_30040	COG0583	DNA-binding transcription factor activity
YZOS03_30100	COG3706	GGDEF domain
YZOS03_30140	COG0579	oxidoreductase
YZOS03_30160	COG1294	oxidase, subunit
YZOS03_30170	COG1271	oxidase subunit
YZOS03_30190	COG3033	Beta-eliminating lyase
YZOS03_30210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
YZOS03_30240	COG3706	GGDEF domain
YZOS03_30270	COG3706	GGDEF domain
YZOS03_30280	COG0415	Belongs to the DNA photolyase family
YZOS03_30290	COG3046	protein related to deoxyribodipyrimidine photolyase
YZOS03_30310	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
YZOS03_30310	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
YZOS03_30320	COG1765	OsmC-like protein
YZOS03_30330	COG0110	maltose O-acetyltransferase activity
YZOS03_30400	COG1011	Hydrolase
YZOS03_30440	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
YZOS03_30460	COG2067	long-chain fatty acid transport protein
YZOS03_30470	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_30480	COG0577	efflux transmembrane transporter activity
YZOS03_30480	COG1136	(ABC) transporter
YZOS03_30510	COG1309	transcriptional regulator
YZOS03_30520	COG3240	lipase activity
YZOS03_30560	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
YZOS03_30580	COG1840	ABC-type Fe3 transport system, periplasmic component
YZOS03_30590	COG3842	ATPase activity
YZOS03_30640	COG2990	Protein conserved in bacteria
YZOS03_30660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
YZOS03_30670	COG2866	Carboxypeptidase
YZOS03_30700	COG0583	DNA-binding transcription factor activity
YZOS03_30730	COG1760	l-serine dehydratase
YZOS03_30770	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
YZOS03_30780	COG0741	lytic transglycosylase activity
YZOS03_30780	COG1388	LysM domain
YZOS03_30820	COG1815	bacterial-type flagellum-dependent cell motility
YZOS03_30830	COG1558	bacterial-type flagellum-dependent cell motility
YZOS03_30860	COG4787	bacterial-type flagellum-dependent cell motility
YZOS03_30870	COG4786	Flagellar basal body rod
YZOS03_30880	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
YZOS03_30890	COG1706	bacterial-type flagellum-dependent cell motility
YZOS03_30900	COG1706	bacterial-type flagellum-dependent cell motility
YZOS03_30920	COG1256	bacterial-type flagellum assembly
YZOS03_30920	COG4786	Flagellar basal body rod
YZOS03_30970	COG1304	FMN binding
YZOS03_31000	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
YZOS03_31010	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
YZOS03_31020	COG0459	protein refolding
YZOS03_31040	COG1280	lysine exporter protein (LysE YggA)
YZOS03_31080	COG1309	transcriptional regulator
YZOS03_31100	COG4303	Ethanolamine ammonia lyase large subunit
YZOS03_31110	COG4302	ethanolamine ammonia-lyase activity
YZOS03_31120	COG0531	amino acid
YZOS03_31140	COG2070	2-Nitropropane dioxygenase
YZOS03_31160	COG1349	DNA-binding transcription factor activity
YZOS03_31190	COG1335	isochorismatase
YZOS03_31210	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
YZOS03_31260	COG0583	DNA-binding transcription factor activity
YZOS03_31290	COG3713	MltA-interacting MipA family protein
YZOS03_31300	COG3015	lipoprotein NlpE involved in copper resistance
YZOS03_31310	COG3448	diguanylate cyclase activity
YZOS03_31310	COG4175	Glycine betaine
YZOS03_31320	COG4176	ABC-type proline glycine betaine transport system permease component
YZOS03_31330	COG1342	Belongs to the UPF0251 family
YZOS03_31380	COG4948	Mandelate Racemase Muconate Lactonizing
YZOS03_31400	COG0583	DNA-binding transcription factor activity
YZOS03_31470	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
YZOS03_31580	COG3842	ATPase activity
YZOS03_31640	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
YZOS03_31690	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
YZOS03_31700	COG2197	response regulator
YZOS03_31730	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
YZOS03_31740	COG0252	asparaginase activity
YZOS03_31750	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
YZOS03_31760	COG0583	DNA-binding transcription factor activity
YZOS03_31790	COG3122	Protein conserved in bacteria
YZOS03_31800	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
YZOS03_31810	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_31820	COG1522	sequence-specific DNA binding
YZOS03_31830	COG3608	succinylglutamate desuccinylase aspartoacylase
YZOS03_31840	COG0006	proline dipeptidase activity
YZOS03_31850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_31870	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_31890	COG1063	alcohol dehydrogenase
YZOS03_31900	COG1902	pentaerythritol trinitrate reductase activity
YZOS03_31930	COG0583	DNA-binding transcription factor activity
YZOS03_31950	COG0513	Belongs to the DEAD box helicase family
YZOS03_32000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_32010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
YZOS03_32010	COG2207	Transcriptional regulator
YZOS03_32020	COG0583	DNA-binding transcription factor activity
YZOS03_32030	COG0300	oxidoreductase activity
YZOS03_32060	COG3746	phosphate-selective porin O and P
YZOS03_32090	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_32140	COG1263	PTS System
YZOS03_32140	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_32150	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
YZOS03_32160	COG1621	beta-fructofuranosidase activity
YZOS03_32170	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
YZOS03_32190	COG0625	glutathione transferase activity
YZOS03_32210	COG1686	Belongs to the peptidase S11 family
YZOS03_32230	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
YZOS03_32230	COG0678	peroxiredoxin activity
YZOS03_32240	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
YZOS03_32270	COG1278	Cold shock
YZOS03_32280	COG1741	Belongs to the pirin family
YZOS03_32290	COG4667	esterase of the alpha-beta hydrolase superfamily
YZOS03_32330	COG2194	sulfuric ester hydrolase activity
YZOS03_32340	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
YZOS03_32360	COG2205	protein histidine kinase activity
YZOS03_32370	COG0745	RESPONSE REGULATOR receiver
YZOS03_32400	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
YZOS03_32440	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
YZOS03_32460	COG2814	Major facilitator Superfamily
YZOS03_32480	COG1418	mRNA catabolic process
YZOS03_32490	COG0402	S-adenosylhomocysteine deaminase activity
YZOS03_32500	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
YZOS03_32510	COG2239	Acts as a magnesium transporter
YZOS03_32520	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
YZOS03_32530	COG1566	PFAM secretion protein HlyD family protein
YZOS03_32590	COG0745	RESPONSE REGULATOR receiver
YZOS03_32600	COG2205	protein histidine kinase activity
YZOS03_32630	COG0531	amino acid
YZOS03_32650	COG0583	DNA-binding transcription factor activity
YZOS03_32710	COG0784	Response regulator, receiver
YZOS03_32710	COG5002	protein histidine kinase activity
YZOS03_32710	COG2205	protein histidine kinase activity
YZOS03_32750	COG3132	Protein of unknown function, DUF480
YZOS03_32760	COG2827	Endonuclease containing a URI domain
YZOS03_32770	COG1879	ABC-type sugar transport system periplasmic component
YZOS03_32780	COG2205	protein histidine kinase activity
YZOS03_32780	COG0784	Response regulator, receiver
YZOS03_32790	COG1846	Transcriptional regulator
YZOS03_32900	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
YZOS03_32910	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
YZOS03_32920	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
YZOS03_32940	COG1280	lysine exporter protein (LysE YggA)
YZOS03_32960	COG0183	Belongs to the thiolase family
YZOS03_32980	COG3243	poly(R)-hydroxyalkanoic acid synthase
YZOS03_33000	COG3005	denitrification pathway
YZOS03_33020	COG0243	molybdopterin cofactor binding
YZOS03_33040	COG3850	Histidine kinase
YZOS03_33050	COG2197	response regulator
YZOS03_33080	COG2195	Cleaves the N-terminal amino acid of tripeptides
YZOS03_33120	COG0840	transmembrane signaling receptor activity
YZOS03_33140	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
YZOS03_33170	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
YZOS03_33180	COG2814	Major facilitator Superfamily
YZOS03_33200	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
YZOS03_33210	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
YZOS03_33230	COG2897	thiosulfate sulfurtransferase activity
YZOS03_33300	COG0038	chloride channel
YZOS03_33330	COG4989	oxidoreductase activity
YZOS03_33360	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
YZOS03_33360	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
YZOS03_33380	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
YZOS03_33480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_33490	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_33520	COG0739	heme binding
YZOS03_33620	COG3501	Rhs element vgr protein
YZOS03_33680	COG0515	serine threonine protein kinase
YZOS03_33750	COG1522	sequence-specific DNA binding
YZOS03_33890	COG2814	Major facilitator Superfamily
YZOS03_33910	COG0583	DNA-binding transcription factor activity
YZOS03_33920	COG4221	oxidoreductase activity
YZOS03_33930	COG0589	response to stress
YZOS03_33950	COG2111	Na H antiporter
YZOS03_33950	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
YZOS03_33960	COG1006	Multisubunit Na H antiporter MnhC subunit
YZOS03_33970	COG0651	ATP synthesis coupled electron transport
YZOS03_33980	COG1863	multisubunit Na H antiporter MnhE subunit
YZOS03_33990	COG2212	antiporter activity
YZOS03_34000	COG1320	monovalent cation:proton antiporter activity
YZOS03_34010	COG2188	Transcriptional regulator
YZOS03_34020	COG1486	melibiose metabolic process
YZOS03_34030	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_34030	COG1263	PTS System
YZOS03_34040	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
YZOS03_34090	COG1022	Amp-dependent synthetase and ligase
YZOS03_34150	COG0500	methyltransferase
YZOS03_34200	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
YZOS03_34210	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_34230	COG3527	Alpha-acetolactate decarboxylase
YZOS03_34260	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
YZOS03_34290	COG0384	phenazine biosynthesis protein PhzF
YZOS03_34300	COG1294	oxidase, subunit
YZOS03_34310	COG1271	oxidase subunit
YZOS03_34320	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_34330	COG0110	maltose O-acetyltransferase activity
YZOS03_34340	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
YZOS03_34340	COG3264	Mechanosensitive ion channel
YZOS03_34370	COG4770	biotin carboxylase activity
YZOS03_34380	COG1024	Enoyl-CoA hydratase
YZOS03_34390	COG1024	Enoyl-CoA hydratase
YZOS03_34400	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
YZOS03_34410	COG1960	acyl-CoA dehydrogenase activity
YZOS03_34430	COG0183	Belongs to the thiolase family
YZOS03_34450	COG1960	acyl-CoA dehydrogenase activity
YZOS03_34460	COG1024	Enoyl-CoA hydratase
YZOS03_34490	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_34510	COG1309	transcriptional regulator
YZOS03_34520	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_34550	COG4176	ABC-type proline glycine betaine transport system permease component
YZOS03_34560	COG0517	IMP dehydrogenase activity
YZOS03_34560	COG4175	Glycine betaine
YZOS03_34590	COG0330	HflC and HflK could
YZOS03_34620	COG2205	protein histidine kinase activity
YZOS03_34620	COG0784	Response regulator, receiver
YZOS03_34640	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
YZOS03_34650	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
YZOS03_34740	COG5001	Diguanylate cyclase
YZOS03_34750	COG1869	D-ribose catabolic process
YZOS03_34760	COG1129	ABC transporter
YZOS03_34770	COG1172	Belongs to the binding-protein-dependent transport system permease family
YZOS03_34780	COG1879	ABC-type sugar transport system periplasmic component
YZOS03_34790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
YZOS03_34800	COG1609	Transcriptional regulator
YZOS03_34830	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
YZOS03_34850	COG4607	ABC-type enterochelin transport system periplasmic component
YZOS03_34860	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
YZOS03_34870	COG4605	iron ion homeostasis
YZOS03_34880	COG4604	ABC transporter, ATP-binding protein
YZOS03_34890	COG0789	Transcriptional regulator
YZOS03_34910	COG1629	transport
YZOS03_34910	COG4771	TonB-dependent receptor
YZOS03_34970	COG1289	transmembrane transporter activity
YZOS03_34980	COG0210	DNA helicase
YZOS03_34990	COG1803	Methylglyoxal synthase
YZOS03_35000	COG1879	ABC-type sugar transport system periplasmic component
YZOS03_35010	COG2198	Histidine kinase
YZOS03_35010	COG0784	Response regulator, receiver
YZOS03_35010	COG2205	protein histidine kinase activity
YZOS03_35040	COG0745	RESPONSE REGULATOR receiver
YZOS03_35050	COG3119	arylsulfatase activity
YZOS03_35070	COG3119	arylsulfatase activity
YZOS03_35080	COG0641	radical SAM
YZOS03_35090	COG0714	Associated with various cellular activities
YZOS03_35160	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
YZOS03_35170	COG0583	DNA-binding transcription factor activity
YZOS03_35180	COG1597	lipid kinase activity
YZOS03_35190	COG3111	PFAM Bacterial OB fold (BOF) protein
YZOS03_35240	COG3069	C4-dicarboxylate transmembrane transporter activity
YZOS03_35270	COG1214	PFAM Peptidase M22, glycoprotease
YZOS03_35270	COG0456	acetyltransferase
YZOS03_35320	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
YZOS03_35330	COG0784	Response regulator, receiver
YZOS03_35330	COG2205	protein histidine kinase activity
YZOS03_35340	COG3300	MHYT domain
YZOS03_35340	COG5001	Diguanylate cyclase
YZOS03_35350	COG2197	response regulator
YZOS03_35360	COG3706	GGDEF domain
YZOS03_35380	COG2197	response regulator
YZOS03_35390	COG0784	Response regulator, receiver
YZOS03_35390	COG0835	chemotaxis
YZOS03_35420	COG2962	Rard protein
YZOS03_35460	COG2076	Multidrug Resistance protein
YZOS03_35530	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
YZOS03_35540	COG5642	Protein of unknown function (DUF2384)
YZOS03_35560	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
YZOS03_35560	COG2755	lipolytic protein G-D-S-L family
YZOS03_35580	COG1902	pentaerythritol trinitrate reductase activity
YZOS03_35590	COG0346	lactoylglutathione lyase activity
YZOS03_35630	COG2239	Acts as a magnesium transporter
YZOS03_35680	COG0242	peptide deformylase activity
YZOS03_35760	COG2176	DNA-directed DNA polymerase activity
YZOS03_35860	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
YZOS03_35870	COG0697	spore germination
YZOS03_35890	COG0583	DNA-binding transcription factor activity
YZOS03_35900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
YZOS03_35910	COG0346	lactoylglutathione lyase activity
YZOS03_35930	COG0509	glycine decarboxylation via glycine cleavage system
YZOS03_35940	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
YZOS03_35960	COG0404	The glycine cleavage system catalyzes the degradation of glycine
YZOS03_36020	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
YZOS03_36020	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
YZOS03_36020	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
YZOS03_36030	COG1105	Belongs to the carbohydrate kinase PfkB family
YZOS03_36040	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
YZOS03_36040	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
YZOS03_36050	COG1609	Transcriptional regulator
YZOS03_36080	COG2200	EAL domain
YZOS03_36080	COG2199	diguanylate cyclase activity
YZOS03_36080	COG2203	Gaf domain
YZOS03_36090	COG0765	amino acid transport
YZOS03_36100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
YZOS03_36110	COG0765	amino acid transport
YZOS03_36120	COG1126	abc transporter atp-binding protein
YZOS03_36130	COG1979	alcohol dehydrogenase
YZOS03_36140	COG2207	Transcriptional regulator
YZOS03_36160	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
YZOS03_36170	COG2759	Belongs to the formate--tetrahydrofolate ligase family
YZOS03_36180	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
YZOS03_36210	COG0546	phosphoglycolate phosphatase activity
YZOS03_36220	COG0840	transmembrane signaling receptor activity
YZOS03_36250	COG0513	Belongs to the DEAD box helicase family
YZOS03_36290	COG3038	cytochrome b561
YZOS03_36300	COG2353	YceI-like domain
YZOS03_36310	COG2116	formate transmembrane transporter activity
YZOS03_36330	COG0583	DNA-binding transcription factor activity
YZOS03_36350	COG3593	DNA synthesis involved in DNA repair
YZOS03_36360	COG0737	Belongs to the 5'-nucleotidase family
YZOS03_36410	COG2267	carboxylic ester hydrolase activity
YZOS03_36420	COG2067	long-chain fatty acid transport protein
YZOS03_36450	COG2050	protein possibly involved in aromatic compounds catabolism
YZOS03_36470	COG4533	DNA binding
YZOS03_36540	COG5001	Diguanylate cyclase
YZOS03_36540	COG3300	MHYT domain
YZOS03_36550	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
YZOS03_36570	COG4181	ATPase activity
YZOS03_36580	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
YZOS03_36600	COG1984	allophanate hydrolase subunit 2
YZOS03_36610	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
YZOS03_36620	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
YZOS03_36640	COG5002	protein histidine kinase activity
YZOS03_36640	COG5001	Diguanylate cyclase
YZOS03_36640	COG3447	MASE1 domain protein
YZOS03_36670	COG0583	DNA-binding transcription factor activity
YZOS03_36680	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
YZOS03_36680	COG1042	CoA-binding domain protein
YZOS03_36680	COG0045	succinate-CoA ligase (ADP-forming) activity
YZOS03_36710	COG1181	Belongs to the D-alanine--D-alanine ligase family
YZOS03_36730	COG0023	Translation Initiation Factor
YZOS03_37030	COG4128	Pfam Zonular occludens toxin
YZOS03_37050	COG0393	Putative heavy-metal-binding
YZOS03_37130	COG0583	DNA-binding transcription factor activity
YZOS03_37160	COG3140	Belongs to the UPF0181 family
YZOS03_37210	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
YZOS03_37220	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
YZOS03_37260	COG5001	Diguanylate cyclase
YZOS03_37260	COG4251	negative regulation of phosphorylation
YZOS03_37260	COG3706	GGDEF domain
YZOS03_37260	COG2203	Gaf domain
YZOS03_37280	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
YZOS03_37290	COG4149	molybdate abc transporter
YZOS03_37300	COG0725	ABC transporter, periplasmic molybdate-binding protein
YZOS03_37320	COG3111	PFAM Bacterial OB fold (BOF) protein
YZOS03_37340	COG0189	ligase activity
YZOS03_37340	COG4067	protein conserved in archaea
YZOS03_37360	COG2207	Transcriptional regulator
YZOS03_37370	COG0534	Mate efflux family protein
YZOS03_37380	COG0602	queuosine metabolic process
YZOS03_37390	COG1328	CTP reductase activity
YZOS03_37450	COG1794	racemase activity, acting on amino acids and derivatives
YZOS03_37460	COG0384	phenazine biosynthesis protein PhzF
YZOS03_37490	COG0243	molybdopterin cofactor binding
YZOS03_37500	COG0583	DNA-binding transcription factor activity
YZOS03_37510	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
YZOS03_37530	COG2197	response regulator
YZOS03_37540	COG3851	Histidine kinase
YZOS03_37550	COG2271	Major facilitator Superfamily
YZOS03_37600	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
YZOS03_37610	COG3118	belongs to the thioredoxin family
YZOS03_37680	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
YZOS03_37720	COG2116	formate transmembrane transporter activity
YZOS03_37740	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
YZOS03_37750	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
YZOS03_37760	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YZOS03_37770	COG5001	Diguanylate cyclase
YZOS03_37800	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
YZOS03_37850	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
YZOS03_37880	COG0277	FAD linked oxidase domain protein
YZOS03_37890	COG0583	DNA-binding transcription factor activity
YZOS03_37910	COG2425	protein containing a von Willebrand factor type A (vWA) domain
YZOS03_37940	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
YZOS03_37960	COG1288	antiporter activity
YZOS03_37980	COG3040	lipid binding
YZOS03_38000	COG0419	ATPase involved in DNA repair
YZOS03_38010	COG0420	3'-5' exonuclease activity
YZOS03_38160	COG0631	protein serine/threonine phosphatase activity
YZOS03_38230	COG0515	serine threonine protein kinase
YZOS03_38230	COG2815	serine threonine protein kinase
YZOS03_38330	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
YZOS03_38330	COG2146	nitrite reductase [NAD(P)H] activity
YZOS03_38340	COG1116	anion transmembrane transporter activity
YZOS03_38350	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
YZOS03_38360	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
YZOS03_38360	COG1116	anion transmembrane transporter activity
YZOS03_38400	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
YZOS03_38420	COG0243	molybdopterin cofactor binding
YZOS03_38440	COG0814	amino acid
YZOS03_38560	COG2847	Copper chaperone PCu(A)C
YZOS03_38570	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_38580	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
YZOS03_38600	COG0800	Aldolase
YZOS03_38610	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
YZOS03_38620	COG1917	Cupin 2, conserved barrel domain protein
YZOS03_38710	COG2186	Transcriptional regulator
YZOS03_38720	COG2186	Transcriptional regulator
YZOS03_38730	COG0517	IMP dehydrogenase activity
YZOS03_38740	COG2176	DNA-directed DNA polymerase activity
YZOS03_38750	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
YZOS03_38880	COG4160	amino acid transport
YZOS03_38890	COG4215	(ABC) transporter
YZOS03_38900	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
YZOS03_38910	COG1126	abc transporter atp-binding protein
YZOS03_38970	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
YZOS03_38990	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_39020	COG1902	pentaerythritol trinitrate reductase activity
YZOS03_39020	COG0446	pyridine nucleotide-disulphide oxidoreductase
YZOS03_39030	COG0109	protoheme IX farnesyltransferase activity
YZOS03_39040	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
YZOS03_39050	COG1845	cytochrome c oxidase, subunit III
YZOS03_39060	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
YZOS03_39070	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
YZOS03_39080	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_39100	COG1024	Enoyl-CoA hydratase
YZOS03_39110	COG1024	Enoyl-CoA hydratase
YZOS03_39140	COG0183	Belongs to the thiolase family
YZOS03_39180	COG1960	acyl-CoA dehydrogenase activity
YZOS03_39190	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
YZOS03_39200	COG1024	Enoyl-CoA hydratase
YZOS03_39230	COG0277	FAD linked oxidase domain protein
YZOS03_39230	COG0247	lactate metabolic process
YZOS03_39350	COG2095	MarC family integral membrane protein
YZOS03_39380	COG0523	cobalamin synthesis protein
YZOS03_39400	COG0739	heme binding
YZOS03_39410	COG2988	succinylglutamate desuccinylase activity
YZOS03_39420	COG0523	cobalamin synthesis protein
YZOS03_39440	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
YZOS03_39480	COG0730	response to heat
YZOS03_39520	COG1073	alpha beta
YZOS03_39530	COG1073	alpha beta
YZOS03_39550	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
YZOS03_39570	COG0513	Belongs to the DEAD box helicase family
YZOS03_39580	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
YZOS03_39640	COG1119	ATPase activity
YZOS03_39650	COG2200	EAL domain
YZOS03_39690	COG0513	Belongs to the DEAD box helicase family
YZOS03_39700	COG0523	cobalamin synthesis protein
YZOS03_39720	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
YZOS03_39740	COG1278	Cold shock
YZOS03_39760	COG0133	tryptophan synthase activity
YZOS03_39780	COG4628	conserved protein (DUF2132)
YZOS03_39790	COG0513	Belongs to the DEAD box helicase family
YZOS03_39840	COG3530	Putative quorum-sensing-regulated virulence factor
YZOS03_39890	COG3186	Phenylalanine-4-hydroxylase
YZOS03_39900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
YZOS03_39910	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
YZOS03_39960	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
YZOS03_39970	COG1454	alcohol dehydrogenase
YZOS03_39980	COG2133	pyrroloquinoline quinone binding
YZOS03_40000	COG0783	Belongs to the Dps family
YZOS03_40010	COG0840	transmembrane signaling receptor activity
YZOS03_40060	COG2205	protein histidine kinase activity
YZOS03_40060	COG0784	Response regulator, receiver
YZOS03_40070	COG1538	Outer membrane efflux protein
YZOS03_40090	COG1132	(ABC) transporter
YZOS03_40120	COG2199	diguanylate cyclase activity
YZOS03_40130	COG3036	rescue of stalled ribosome
YZOS03_40140	COG1278	Cold shock
YZOS03_40200	COG0545	Peptidyl-prolyl cis-trans isomerase
YZOS03_40210	COG0109	protoheme IX farnesyltransferase activity
YZOS03_40220	COG1612	heme a metabolic process
YZOS03_40260	COG1845	cytochrome c oxidase, subunit III
YZOS03_40270	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
YZOS03_40280	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
YZOS03_40310	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YZOS03_40330	COG1280	lysine exporter protein (LysE YggA)
YZOS03_40370	COG0179	Fumarylacetoacetate (FAA) hydrolase
YZOS03_40410	COG0697	spore germination
YZOS03_40450	COG2814	Major facilitator Superfamily
YZOS03_40460	COG0583	DNA-binding transcription factor activity
YZOS03_40480	COG5001	Diguanylate cyclase
YZOS03_40490	COG0739	heme binding
YZOS03_40530	COG3314	Sporulation integral membrane protein YlbJ
YZOS03_40560	COG0814	amino acid
YZOS03_40610	COG4989	oxidoreductase activity
YZOS03_40660	COG1733	regulation of RNA biosynthetic process
YZOS03_40690	COG0798	PFAM Bile acid sodium symporter
YZOS03_40710	COG1881	PFAM PEBP family protein
YZOS03_40720	COG1881	PFAM PEBP family protein
YZOS03_40750	COG1131	(ABC) transporter
YZOS03_40760	COG0842	Transport permease protein
YZOS03_40780	COG3383	formate dehydrogenase (NAD+) activity
YZOS03_40820	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
YZOS03_40870	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
YZOS03_40890	COG2067	long-chain fatty acid transport protein
YZOS03_40910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
YZOS03_40930	COG1505	serine-type exopeptidase activity
YZOS03_40940	COG0488	(ABC) transporter
YZOS03_40950	COG0589	response to stress
YZOS03_40960	COG2249	NAD(P)H dehydrogenase (quinone) activity
YZOS03_41000	COG0366	Alpha amylase catalytic
YZOS03_41010	COG0789	Transcriptional regulator
YZOS03_41020	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
YZOS03_41040	COG4934	collagen metabolic process
YZOS03_41060	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
YZOS03_41070	COG0583	DNA-binding transcription factor activity
YZOS03_41110	COG2610	gluconate transmembrane transporter activity
YZOS03_41120	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
YZOS03_41130	COG3622	Belongs to the hyi family
YZOS03_41140	COG0235	Class ii aldolase
YZOS03_41150	COG3395	kinase activity
YZOS03_41160	COG2084	Dehydrogenase
YZOS03_41170	COG1349	DNA-binding transcription factor activity
YZOS03_41200	COG0747	negative chemotaxis
YZOS03_41210	COG4608	Belongs to the ABC transporter superfamily
YZOS03_41220	COG0444	Belongs to the ABC transporter superfamily
YZOS03_41230	COG0534	Mate efflux family protein
YZOS03_41240	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
YZOS03_41250	COG0784	Response regulator, receiver
YZOS03_41250	COG0835	chemotaxis
YZOS03_41270	COG0748	coenzyme F420 binding
YZOS03_41280	COG3721	Heme iron utilization protein
YZOS03_41300	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
YZOS03_41310	COG0811	peptide transport
YZOS03_41320	COG0848	biopolymer transport protein
YZOS03_41340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
YZOS03_41350	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
YZOS03_41430	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
YZOS03_41450	COG0633	Ferredoxin
YZOS03_41450	COG3217	Mosc domain protein beta barrel domain protein
YZOS03_41450	COG3217	Mosc domain protein beta barrel domain protein
YZOS03_41450	COG0633	Ferredoxin
YZOS03_41460	COG0401	homolog of Blt101
YZOS03_41470	COG0418	dihydroorotase activity
YZOS03_41480	COG2354	Protein conserved in bacteria
YZOS03_41540	COG3833	ABC-type maltose transport systems, permease component
YZOS03_41550	COG1175	transmembrane transport
YZOS03_41570	COG3842	ATPase activity
YZOS03_41580	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
YZOS03_41640	COG0438	transferase activity, transferring glycosyl groups
YZOS03_41700	COG3097	Belongs to the UPF0267 family
YZOS03_41710	COG1309	transcriptional regulator
YZOS03_41720	COG2130	NADP-dependent
YZOS03_41740	COG0753	catalase activity
YZOS03_41750	COG2084	Dehydrogenase
YZOS03_41810	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
YZOS03_41820	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
YZOS03_41840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
YZOS03_41850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
YZOS03_41860	COG1012	belongs to the aldehyde dehydrogenase family
YZOS03_41890	COG0583	DNA-binding transcription factor activity
YZOS03_41900	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
YZOS03_41910	COG0569	domain protein
YZOS03_41920	COG0745	RESPONSE REGULATOR receiver
YZOS03_41930	COG2205	protein histidine kinase activity
YZOS03_41930	COG2205	protein histidine kinase activity
YZOS03_41940	COG1132	(ABC) transporter
YZOS03_41950	COG4774	siderophore transport
YZOS03_41960	COG1120	ATPase activity
YZOS03_41970	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
YZOS03_42010	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
YZOS03_42050	COG2197	response regulator
YZOS03_42080	COG0714	Associated with various cellular activities
YZOS03_42100	COG2304	oxidoreductase activity
YZOS03_42140	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
YZOS03_42150	COG0581	inorganic phosphate transmembrane transporter activity
YZOS03_42160	COG0573	inorganic phosphate transmembrane transporter activity
YZOS03_42220	COG4771	TonB-dependent receptor
YZOS03_42230	COG1770	oligopeptidase
YZOS03_42240	COG0513	Belongs to the DEAD box helicase family
YZOS03_42260	COG1376	ErfK ybiS ycfS ynhG family protein
YZOS03_42260	COG1388	LysM domain
YZOS03_42270	COG0415	Belongs to the DNA photolyase family
YZOS03_42280	COG0789	Transcriptional regulator
YZOS03_42290	COG3272	Protein of unknown function (DUF1722)
YZOS03_42300	COG0813	purine-nucleoside phosphorylase activity
YZOS03_42370	COG1566	PFAM secretion protein HlyD family protein
YZOS03_42380	COG4720	Psort location CytoplasmicMembrane, score
YZOS03_42390	COG1122	ATPase activity
YZOS03_42430	COG0348	domain, Protein
YZOS03_42440	COG0437	4 iron, 4 sulfur cluster binding
YZOS03_42450	COG1247	-acetyltransferase
YZOS03_42490	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
YZOS03_42510	COG1067	ATP-dependent peptidase activity
YZOS03_42540	COG4172	Belongs to the ABC transporter superfamily
YZOS03_42550	COG1505	serine-type exopeptidase activity
YZOS03_42560	COG0583	DNA-binding transcription factor activity
YZOS03_42570	COG1620	l-lactate permease
YZOS03_42580	COG1304	FMN binding
YZOS03_42600	COG0668	transmembrane transport
YZOS03_42670	COG1063	alcohol dehydrogenase
YZOS03_42680	COG0156	8-amino-7-oxononanoate synthase activity
YZOS03_42690	COG3300	MHYT domain
YZOS03_42690	COG5001	Diguanylate cyclase
YZOS03_42740	COG0745	RESPONSE REGULATOR receiver
YZOS03_42800	COG0346	lactoylglutathione lyase activity
YZOS03_42920	COG1157	protein secretion by the type III secretion system
YZOS03_42940	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
YZOS03_43020	COG1987	bacterial-type flagellum assembly
YZOS03_43040	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
YZOS03_43070	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
YZOS03_43090	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
YZOS03_43100	COG1516	flagellar protein fliS
YZOS03_43130	COG1580	Controls the rotational direction of flagella during chemotaxis
YZOS03_43140	COG1191	sigma factor activity
YZOS03_43150	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
YZOS03_43160	COG1360	Flagellar Motor Protein
YZOS03_43220	COG1882	Formate acetyltransferase
YZOS03_43230	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
YZOS03_43240	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
YZOS03_43270	COG2205	protein histidine kinase activity
YZOS03_43280	COG0745	RESPONSE REGULATOR receiver
YZOS03_43300	COG0454	-acetyltransferase
YZOS03_43320	COG2814	Major facilitator Superfamily
YZOS03_43410	COG0628	permease
YZOS03_43420	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
YZOS03_43460	COG4628	conserved protein (DUF2132)
YZOS03_43470	COG0583	DNA-binding transcription factor activity
YZOS03_43520	COG1686	Belongs to the peptidase S11 family
YZOS03_43540	COG1054	Belongs to the UPF0176 family
YZOS03_43560	COG0415	Belongs to the DNA photolyase family
YZOS03_43570	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
YZOS03_43580	COG3397	chitin binding
YZOS03_43590	COG4667	esterase of the alpha-beta hydrolase superfamily
YZOS03_43600	COG2095	MarC family integral membrane protein
YZOS03_43630	COG1596	polysaccharide export
YZOS03_43640	COG1596	polysaccharide export
YZOS03_43690	COG0583	DNA-binding transcription factor activity
YZOS03_43710	COG1301	dicarboxylic acid transport
YZOS03_43720	COG3339	Conserved Protein
YZOS03_43730	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
YZOS03_43740	COG0700	Nucleoside recognition
YZOS03_43750	COG3366	ferrous iron transmembrane transporter activity
YZOS03_43770	COG0366	Alpha amylase catalytic
YZOS03_43780	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
YZOS03_43790	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
YZOS03_43800	COG1640	4-alpha-glucanotransferase
YZOS03_43810	COG0058	SHG alpha-glucan phosphorylase activity
YZOS03_43820	COG2909	trisaccharide binding
YZOS03_43850	COG1999	signal sequence binding
YZOS03_43860	COG1263	PTS System
YZOS03_43860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_43870	COG1162	GTPase activity
YZOS03_43880	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
YZOS03_43890	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
YZOS03_43910	COG0531	amino acid
YZOS03_43920	COG1982	Orn Lys Arg decarboxylase major
YZOS03_43970	COG2356	endonuclease I
YZOS03_44010	COG4580	involved in the transport of maltose and maltodextrins
YZOS03_44030	COG1760	l-serine dehydratase
YZOS03_44040	COG1760	l-serine dehydratase
YZOS03_44130	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
YZOS03_44150	COG1609	Transcriptional regulator
YZOS03_44160	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
YZOS03_44180	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
YZOS03_44180	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
YZOS03_44210	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
YZOS03_44220	COG1609	Transcriptional regulator
YZOS03_44240	COG2814	Major facilitator Superfamily
YZOS03_44270	COG0739	heme binding
YZOS03_44290	COG0612	Peptidase, M16
YZOS03_44300	COG0840	transmembrane signaling receptor activity
YZOS03_44310	COG1120	ATPase activity
YZOS03_44320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
YZOS03_44330	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
YZOS03_44340	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
YZOS03_44350	COG4772	TonB-dependent receptor
YZOS03_44390	COG2814	Major facilitator Superfamily
YZOS03_44400	COG4264	IucA IucC family
YZOS03_44410	COG0019	diaminopimelate decarboxylase activity
YZOS03_44430	COG1653	transport
YZOS03_44480	COG0826	peptidase U32
YZOS03_44500	COG1136	(ABC) transporter
YZOS03_44510	COG0577	efflux transmembrane transporter activity
YZOS03_44580	COG1764	response to oxidative stress
YZOS03_44590	COG1846	Transcriptional regulator
YZOS03_44610	COG3634	alkyl hydroperoxide reductase activity
YZOS03_44710	COG2258	MOSC domain
YZOS03_44720	COG0513	Belongs to the DEAD box helicase family
YZOS03_44740	COG1132	(ABC) transporter
YZOS03_44810	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
YZOS03_44820	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
YZOS03_44870	COG0259	pyridoxamine-phosphate oxidase activity
YZOS03_44970	COG4166	transmembrane transport
YZOS03_45000	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
YZOS03_45010	COG1263	PTS System
YZOS03_45010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
YZOS03_45020	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
YZOS03_45030	COG3340	Belongs to the peptidase S51 family
YZOS03_45070	COG1444	tRNA N-acetyltransferase activity
YZOS03_45120	COG4608	Belongs to the ABC transporter superfamily
YZOS03_45130	COG0444	Belongs to the ABC transporter superfamily
YZOS03_45150	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
YZOS03_45150	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
YZOS03_45200	COG0772	Belongs to the SEDS family
YZOS03_45220	COG1136	(ABC) transporter
YZOS03_45260	COG3275	phosphorelay sensor kinase activity
YZOS03_45270	COG3279	Response regulator of the LytR AlgR family
YZOS03_45280	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
YZOS03_45320	COG0786	glutamate:sodium symporter activity
YZOS03_45340	COG1131	(ABC) transporter
YZOS03_45350	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_45360	COG0786	glutamate:sodium symporter activity
YZOS03_45380	COG0363	glucosamine-6-phosphate deaminase activity
YZOS03_45420	COG1741	Belongs to the pirin family
YZOS03_45430	COG2259	Doxx family
YZOS03_45450	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
YZOS03_45450	COG2169	Transcriptional regulator
YZOS03_45460	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
YZOS03_45480	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
YZOS03_45530	COG0596	Alpha beta hydrolase
YZOS03_45560	COG3123	guanosine phosphorylase activity
YZOS03_45590	COG0534	Mate efflux family protein
YZOS03_45600	COG0564	pseudouridine synthase activity
YZOS03_45630	COG0583	DNA-binding transcription factor activity
YZOS03_45640	COG0561	phosphatase activity
YZOS03_45660	COG2199	diguanylate cyclase activity
YZOS03_45690	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
YZOS03_45700	COG2162	N-hydroxyarylamine O-acetyltransferase activity
YZOS03_45710	COG0583	DNA-binding transcription factor activity
YZOS03_45720	COG2375	cellular response to nickel ion
YZOS03_45780	COG1357	PFAM Pentapeptide repeats (8 copies)
YZOS03_45790	COG3047	cAMP biosynthetic process
YZOS03_45910	COG3835	regulator
YZOS03_45920	COG2610	gluconate transmembrane transporter activity
YZOS03_45930	COG1929	Belongs to the glycerate kinase type-1 family
YZOS03_45940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
YZOS03_45980	COG0456	acetyltransferase
YZOS03_46010	COG1028	Short-chain dehydrogenase reductase Sdr
YZOS03_46020	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
YZOS03_46030	COG3005	denitrification pathway
YZOS03_46040	COG0243	molybdopterin cofactor binding
YZOS03_46080	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
YZOS03_46090	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
YZOS03_46100	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
YZOS03_46110	COG1116	anion transmembrane transporter activity
YZOS03_46120	COG0351	phosphomethylpyrimidine kinase
YZOS03_46140	COG0312	modulator of DNA gyrase
YZOS03_46150	COG0312	modulator of DNA gyrase
YZOS03_46160	COG1901	pseudouridine methyltransferase
YZOS03_46210	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
YZOS03_46230	COG0584	glycerophosphoryl diester phosphodiesterase
YZOS03_46240	COG0745	RESPONSE REGULATOR receiver
YZOS03_46280	COG0811	peptide transport
YZOS03_46290	COG0811	peptide transport
YZOS03_46300	COG0848	biopolymer transport protein