locus-tag class description B5S57_00015 PF13737 Transposase DDE domain B5S57_00050 PF04986 Putative transposase B5S57_00050 PF14319 Transposase zinc-binding domain B5S57_00070 PF13614 AAA domain B5S57_00075 PF08535 KorB domain B5S57_00075 PF06613 KorB C-terminal beta-barrel domain B5S57_00075 PF02195 ParB-like nuclease domain B5S57_00095 PF05973 Phage derived protein Gp49-like (DUF891) B5S57_00105 PF14319 Transposase zinc-binding domain B5S57_00105 PF04986 Putative transposase B5S57_00120 PF13007 Transposase C of IS166 homeodomain B5S57_00120 PF13005 zinc-finger binding domain of transposase IS66 B5S57_00120 PF13817 IS66 C-terminal element B5S57_00120 PF03050 Transposase IS66 family B5S57_00135 PF00005 ABC transporter B5S57_00135 PF00664 ABC transporter transmembrane region B5S57_00140 PF00005 ABC transporter B5S57_00145 PF00282 Pyridoxal-dependent decarboxylase conserved domain B5S57_00155 PF13737 Transposase DDE domain B5S57_00160 PF00550 Phosphopantetheine attachment site B5S57_00160 PF13193 AMP-binding enzyme C-terminal domain B5S57_00160 PF00668 Condensation domain B5S57_00160 PF00501 AMP-binding enzyme B5S57_00165 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) B5S57_00170 PF00975 Thioesterase domain B5S57_00175 PF13193 AMP-binding enzyme C-terminal domain B5S57_00175 PF00668 Condensation domain B5S57_00175 PF00501 AMP-binding enzyme B5S57_00180 PF07715 TonB-dependent Receptor Plug Domain B5S57_00180 PF00593 TonB dependent receptor B5S57_00185 PF01497 Periplasmic binding protein B5S57_00190 PF01032 FecCD transport family B5S57_00195 PF01032 FecCD transport family B5S57_00200 PF13737 Transposase DDE domain B5S57_00205 PF00501 AMP-binding enzyme B5S57_00205 PF13193 AMP-binding enzyme C-terminal domain B5S57_00205 PF00668 Condensation domain B5S57_00205 PF00550 Phosphopantetheine attachment site B5S57_00215 PF13737 Transposase DDE domain B5S57_00220 PF02631 RecX family B5S57_00230 PF00239 Resolvase, N terminal domain B5S57_00230 PF02796 Helix-turn-helix domain of resolvase B5S57_00235 PF13700 Domain of unknown function (DUF4158) B5S57_00235 PF01526 Tn3 transposase DDE domain B5S57_00280 PF13005 zinc-finger binding domain of transposase IS66 B5S57_00280 PF13007 Transposase C of IS166 homeodomain B5S57_00280 PF13817 IS66 C-terminal element B5S57_00280 PF03050 Transposase IS66 family B5S57_00290 PF13737 Transposase DDE domain B5S57_00295 PF00425 chorismate binding enzyme B5S57_00300 PF13193 AMP-binding enzyme C-terminal domain B5S57_00300 PF00501 AMP-binding enzyme B5S57_00305 PF00857 Isochorismatase family B5S57_00305 PF00550 Phosphopantetheine attachment site B5S57_00380 PF03050 Transposase IS66 family B5S57_00380 PF13007 Transposase C of IS166 homeodomain B5S57_00380 PF13817 IS66 C-terminal element B5S57_00380 PF13005 zinc-finger binding domain of transposase IS66 B5S57_00465 PF13007 Transposase C of IS166 homeodomain B5S57_00465 PF13005 zinc-finger binding domain of transposase IS66 B5S57_00465 PF13817 IS66 C-terminal element B5S57_00465 PF03050 Transposase IS66 family B5S57_00470 PF03193 RsgA GTPase B5S57_00480 PF08241 Methyltransferase domain B5S57_00485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_00485 PF00672 HAMP domain B5S57_00490 PF03741 Integral membrane protein TerC family B5S57_00500 PF02525 Flavodoxin-like fold B5S57_00505 PF00248 Aldo/keto reductase family B5S57_00510 PF03466 LysR substrate binding domain B5S57_00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_00530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_00530 PF00529 HlyD membrane-fusion protein of T1SS B5S57_00545 PF02347 Glycine cleavage system P-protein B5S57_00555 PF00464 Serine hydroxymethyltransferase B5S57_00565 PF01571 Aminomethyltransferase folate-binding domain B5S57_00565 PF08669 Glycine cleavage T-protein C-terminal barrel domain B5S57_00580 PF05193 Peptidase M16 inactive domain B5S57_00580 PF00675 Insulinase (Peptidase family M16) B5S57_00595 PF02378 Phosphotransferase system, EIIC B5S57_00595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B5S57_00600 PF00294 pfkB family carbohydrate kinase B5S57_00605 PF00381 PTS HPr component phosphorylation site B5S57_00605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B5S57_00610 PF00356 Bacterial regulatory proteins, lacI family B5S57_00610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family B5S57_00615 PF00149 Calcineurin-like phosphoesterase B5S57_00615 PF12320 Type 5 capsule protein repressor C-terminal domain B5S57_00620 PF13476 AAA domain B5S57_00625 PF00072 Response regulator receiver domain B5S57_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_00630 PF00155 Aminotransferase class I and II B5S57_00640 PF00654 Voltage gated chloride channel B5S57_00645 PF02492 CobW/HypB/UreG, nucleotide-binding domain B5S57_00645 PF07683 Cobalamin synthesis protein cobW C-terminal domain B5S57_00650 PF00005 ABC transporter B5S57_00655 PF12704 MacB-like periplasmic core domain B5S57_00655 PF02687 FtsX-like permease family B5S57_00655 PF00005 ABC transporter B5S57_00660 PF02687 FtsX-like permease family B5S57_00660 PF12704 MacB-like periplasmic core domain B5S57_00660 PF00005 ABC transporter B5S57_00675 PF01926 50S ribosome-binding GTPase B5S57_00705 PF03608 PTS system enzyme II sorbitol-specific factor B5S57_00710 PF03612 Sorbitol phosphotransferase enzyme II N-terminus B5S57_00710 PF07663 Sorbitol phosphotransferase enzyme II C-terminus B5S57_00715 PF03829 PTS system glucitol/sorbitol-specific IIA component B5S57_00720 PF00106 short chain dehydrogenase B5S57_00725 PF06923 Glucitol operon activator protein (GutM) B5S57_00730 PF00455 DeoR C terminal sensor domain B5S57_00730 PF08220 DeoR-like helix-turn-helix domain B5S57_00735 PF03608 PTS system enzyme II sorbitol-specific factor B5S57_00740 PF03612 Sorbitol phosphotransferase enzyme II N-terminus B5S57_00740 PF07663 Sorbitol phosphotransferase enzyme II C-terminus B5S57_00745 PF03829 PTS system glucitol/sorbitol-specific IIA component B5S57_00750 PF00005 ABC transporter B5S57_00750 PF03459 TOBE domain B5S57_00750 PF17912 MalK OB fold domain B5S57_00760 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B5S57_00760 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_00770 PF13416 Bacterial extracellular solute-binding protein B5S57_00775 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_00780 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_00785 PF02903 Alpha amylase, N-terminal ig-like domain B5S57_00785 PF00128 Alpha amylase, catalytic domain B5S57_00805 PF07549 SecD/SecF GG Motif B5S57_00805 PF13721 SecD export protein N-terminal TM region B5S57_00805 PF02355 Protein export membrane protein B5S57_00810 PF02355 Protein export membrane protein B5S57_00810 PF07549 SecD/SecF GG Motif B5S57_00820 PF03264 NapC/NirT cytochrome c family, N-terminal region B5S57_00825 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) B5S57_00830 PF00384 Molybdopterin oxidoreductase B5S57_00830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B5S57_00830 PF01568 Molydopterin dinucleotide binding domain B5S57_00840 PF13187 4Fe-4S dicluster domain B5S57_00840 PF12838 4Fe-4S dicluster domain B5S57_00845 PF00672 HAMP domain B5S57_00845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_00845 PF07730 Histidine kinase B5S57_00845 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term B5S57_00850 PF00196 Bacterial regulatory proteins, luxR family B5S57_00850 PF00072 Response regulator receiver domain B5S57_00855 PF03606 C4-dicarboxylate anaerobic carrier B5S57_00880 PF12849 PBP superfamily domain B5S57_00890 PF08206 Ribonuclease B OB domain B5S57_00890 PF00773 RNB domain B5S57_00890 PF00575 S1 RNA binding domain B5S57_00895 PF00271 Helicase conserved C-terminal domain B5S57_00895 PF03880 DbpA RNA binding domain B5S57_00895 PF00270 DEAD/DEAH box helicase B5S57_00900 PF02824 TGS domain B5S57_00900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B5S57_00900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B5S57_00900 PF03129 Anticodon binding domain B5S57_00905 PF00707 Translation initiation factor IF-3, C-terminal domain B5S57_00905 PF05198 Translation initiation factor IF-3, N-terminal domain B5S57_00910 PF01632 Ribosomal protein L35 B5S57_00915 PF00453 Ribosomal protein L20 B5S57_00920 PF13495 Phage integrase, N-terminal SAM-like domain B5S57_00920 PF00589 Phage integrase family B5S57_00925 PF13817 IS66 C-terminal element B5S57_00925 PF13005 zinc-finger binding domain of transposase IS66 B5S57_00925 PF13007 Transposase C of IS166 homeodomain B5S57_00925 PF03050 Transposase IS66 family B5S57_00955 PF13005 zinc-finger binding domain of transposase IS66 B5S57_00955 PF03050 Transposase IS66 family B5S57_00955 PF13007 Transposase C of IS166 homeodomain B5S57_00955 PF13817 IS66 C-terminal element B5S57_00970 PF13007 Transposase C of IS166 homeodomain B5S57_00970 PF03050 Transposase IS66 family B5S57_00970 PF13817 IS66 C-terminal element B5S57_00970 PF13005 zinc-finger binding domain of transposase IS66 B5S57_01155 PF08212 Lipocalin-like domain B5S57_01215 PF13005 zinc-finger binding domain of transposase IS66 B5S57_01215 PF13007 Transposase C of IS166 homeodomain B5S57_01215 PF13817 IS66 C-terminal element B5S57_01215 PF03050 Transposase IS66 family B5S57_01245 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) B5S57_01280 PF13737 Transposase DDE domain B5S57_01375 PF01253 Translation initiation factor SUI1 B5S57_01390 PF01820 D-ala D-ala ligase N-terminus B5S57_01390 PF07478 D-ala D-ala ligase C-terminus B5S57_01400 PF00583 Acetyltransferase (GNAT) family B5S57_01400 PF13380 CoA binding domain B5S57_01400 PF13607 Succinyl-CoA ligase like flavodoxin domain B5S57_01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_01405 PF03466 LysR substrate binding domain B5S57_01425 PF13005 zinc-finger binding domain of transposase IS66 B5S57_01425 PF03050 Transposase IS66 family B5S57_01425 PF13817 IS66 C-terminal element B5S57_01425 PF13007 Transposase C of IS166 homeodomain B5S57_01440 PF03701 Uncharacterised protein family (UPF0181) B5S57_01455 PF00486 Transcriptional regulatory protein, C terminal B5S57_01455 PF00072 Response regulator receiver domain B5S57_01465 PF02233 NAD(P) transhydrogenase beta subunit B5S57_01470 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch B5S57_01470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B5S57_01470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B5S57_01485 PF00990 Diguanylate cyclase, GGDEF domain B5S57_01490 PF00313 'Cold-shock' DNA-binding domain B5S57_01500 PF17200 Single Cache domain 2 B5S57_01500 PF00672 HAMP domain B5S57_01500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_01520 PF00043 Glutathione S-transferase, C-terminal domain B5S57_01520 PF02798 Glutathione S-transferase, N-terminal domain B5S57_01535 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_01535 PF12804 MobA-like NTP transferase domain B5S57_01535 PF03479 Plants and Prokaryotes Conserved (PCC) domain B5S57_01540 PF12848 ABC transporter B5S57_01540 PF00005 ABC transporter B5S57_01545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B5S57_01545 PF12793 Sugar transport-related sRNA regulator N-term B5S57_01555 PF03061 Thioesterase superfamily B5S57_01565 PF08274 PhnA Zinc-Ribbon B5S57_01565 PF03831 PhnA domain B5S57_01590 PF03050 Transposase IS66 family B5S57_01590 PF13817 IS66 C-terminal element B5S57_01590 PF13007 Transposase C of IS166 homeodomain B5S57_01590 PF13005 zinc-finger binding domain of transposase IS66 B5S57_01595 PF00589 Phage integrase family B5S57_01595 PF02899 Phage integrase, N-terminal SAM-like domain B5S57_01605 PF13737 Transposase DDE domain B5S57_01625 PF13597 Anaerobic ribonucleoside-triphosphate reductase B5S57_01625 PF03477 ATP cone domain B5S57_01630 PF03477 ATP cone domain B5S57_01630 PF13597 Anaerobic ribonucleoside-triphosphate reductase B5S57_01635 PF07694 5TMR of 5TMR-LYT B5S57_01635 PF00990 Diguanylate cyclase, GGDEF domain B5S57_01640 PF00873 AcrB/AcrD/AcrF family B5S57_01645 PF00529 HlyD membrane-fusion protein of T1SS B5S57_01645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_01655 PF04143 Sulphur transport B5S57_01675 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_01675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B5S57_01680 PF07804 HipA-like C-terminal domain B5S57_01680 PF13657 HipA N-terminal domain B5S57_01685 PF09278 MerR, DNA binding B5S57_01685 PF00376 MerR family regulatory protein B5S57_01690 PF00892 EamA-like transporter family B5S57_01700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) B5S57_01705 PF17760 UvrA interaction domain B5S57_01705 PF17755 UvrA DNA-binding domain B5S57_01705 PF00005 ABC transporter B5S57_01810 PF00717 Peptidase S24-like B5S57_01815 PF11799 impB/mucB/samB family C-terminal domain B5S57_01815 PF00817 impB/mucB/samB family B5S57_01815 PF13438 Domain of unknown function (DUF4113) B5S57_01815 PF11798 IMS family HHH motif B5S57_01880 PF13737 Transposase DDE domain B5S57_01900 PF13737 Transposase DDE domain B5S57_01940 PF13408 Recombinase zinc beta ribbon domain B5S57_01940 PF00239 Resolvase, N terminal domain B5S57_01940 PF07508 Recombinase B5S57_01950 PF00158 Sigma-54 interaction domain B5S57_01950 PF02954 Bacterial regulatory protein, Fis family B5S57_01950 PF00072 Response regulator receiver domain B5S57_01955 PF00990 Diguanylate cyclase, GGDEF domain B5S57_01955 PF13188 PAS domain B5S57_01955 PF00563 EAL domain B5S57_01955 PF03707 Bacterial signalling protein N terminal repeat B5S57_01960 PF00512 His Kinase A (phospho-acceptor) domain B5S57_01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_01965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_01965 PF00989 PAS fold B5S57_01965 PF00512 His Kinase A (phospho-acceptor) domain B5S57_01975 PF00072 Response regulator receiver domain B5S57_01990 PF00563 EAL domain B5S57_01990 PF00360 Phytochrome region B5S57_01990 PF00990 Diguanylate cyclase, GGDEF domain B5S57_01990 PF01590 GAF domain B5S57_02000 PF03459 TOBE domain B5S57_02000 PF00005 ABC transporter B5S57_02005 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_02015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B5S57_02015 PF07685 CobB/CobQ-like glutamine amidotransferase domain B5S57_02020 PF04076 Bacterial OB fold (BOF) protein B5S57_02030 PF00990 Diguanylate cyclase, GGDEF domain B5S57_02030 PF05231 MASE1 B5S57_02030 PF08447 PAS fold B5S57_02030 PF13426 PAS domain B5S57_02030 PF00563 EAL domain B5S57_02030 PF08448 PAS fold B5S57_02035 PF00483 Nucleotidyl transferase B5S57_02040 PF00704 Glycosyl hydrolases family 18 B5S57_02040 PF06483 Chitinase C B5S57_02045 PF06719 AraC-type transcriptional regulator N-terminus B5S57_02045 PF12833 Helix-turn-helix domain B5S57_02055 PF00072 Response regulator receiver domain B5S57_02055 PF02954 Bacterial regulatory protein, Fis family B5S57_02055 PF14532 Sigma-54 interaction domain B5S57_02060 PF00672 HAMP domain B5S57_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_02060 PF00512 His Kinase A (phospho-acceptor) domain B5S57_02075 PF07690 Major Facilitator Superfamily B5S57_02080 PF02887 Pyruvate kinase, alpha/beta domain B5S57_02080 PF00224 Pyruvate kinase, barrel domain B5S57_02085 PF00512 His Kinase A (phospho-acceptor) domain B5S57_02085 PF01627 Hpt domain B5S57_02085 PF00072 Response regulator receiver domain B5S57_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_02085 PF00672 HAMP domain B5S57_02090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family B5S57_02095 PF02142 MGS-like domain B5S57_02100 PF13361 UvrD-like helicase C-terminal domain B5S57_02100 PF12462 DNA helicase IV / RNA helicase N terminal B5S57_02100 PF00580 UvrD/REP helicase N-terminal domain B5S57_02105 PF12805 FUSC-like inner membrane protein yccS B5S57_02125 PF01266 FAD dependent oxidoreductase B5S57_02125 PF16901 C-terminal domain of alpha-glycerophosphate oxidase B5S57_02135 PF00512 His Kinase A (phospho-acceptor) domain B5S57_02135 PF09308 LuxQ, periplasmic B5S57_02135 PF00072 Response regulator receiver domain B5S57_02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_02140 PF13407 Periplasmic binding protein domain B5S57_02150 PF01541 GIY-YIG catalytic domain B5S57_02165 PF04363 Protein of unknown function (DUF496) B5S57_02175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain B5S57_02175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain B5S57_02180 PF00230 Major intrinsic protein B5S57_02185 PF01266 FAD dependent oxidoreductase B5S57_02185 PF04324 BFD-like [2Fe-2S] binding domain B5S57_02190 PF00890 FAD binding domain B5S57_02195 PF02754 Cysteine-rich domain B5S57_02195 PF13183 4Fe-4S dicluster domain B5S57_02200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B5S57_02200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B5S57_02205 PF00085 Thioredoxin B5S57_02210 PF07690 Major Facilitator Superfamily B5S57_02215 PF11756 Nitrous oxide-stimulated promoter B5S57_02225 PF01513 ATP-NAD kinase B5S57_02230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B5S57_02230 PF10414 Sirohaem synthase dimerisation region B5S57_02230 PF14824 Sirohaem biosynthesis protein central B5S57_02240 PF13806 Rieske-like [2Fe-2S] domain B5S57_02245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B5S57_02245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B5S57_02245 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_02245 PF04324 BFD-like [2Fe-2S] binding domain B5S57_02245 PF18267 Rubredoxin NAD+ reductase C-terminal domain B5S57_02255 PF00440 Bacterial regulatory proteins, tetR family B5S57_02255 PF13977 BetI-type transcriptional repressor, C-terminal B5S57_02260 PF00171 Aldehyde dehydrogenase family B5S57_02265 PF00732 GMC oxidoreductase B5S57_02265 PF05199 GMC oxidoreductase B5S57_02270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system B5S57_02275 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_02280 PF00005 ABC transporter B5S57_02280 PF00571 CBS domain B5S57_02295 PF05762 VWA domain containing CoxE-like protein B5S57_02300 PF07728 AAA domain (dynein-related subfamily) B5S57_02300 PF12592 Protein of unknown function (DUF3763) B5S57_02300 PF17868 AAA lid domain B5S57_02310 PF01212 Beta-eliminating lyase B5S57_02320 PF00270 DEAD/DEAH box helicase B5S57_02320 PF00271 Helicase conserved C-terminal domain B5S57_02325 PF03222 Tryptophan/tyrosine permease family B5S57_02330 PF00672 HAMP domain B5S57_02330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_02335 PF16363 GDP-mannose 4,6 dehydratase B5S57_02340 PF03746 LamB/YcsF family B5S57_02350 PF02626 Carboxyltransferase domain, subdomain A and B B5S57_02365 PF00005 ABC transporter B5S57_02370 PF13472 GDSL-like Lipase/Acylhydrolase family B5S57_02375 PF07055 Enoyl reductase FAD binding domain B5S57_02375 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase B5S57_02375 PF12241 Trans-2-enoyl-CoA reductase catalytic region B5S57_02380 PF00498 FHA domain B5S57_02380 PF00990 Diguanylate cyclase, GGDEF domain B5S57_02380 PF00563 EAL domain B5S57_02390 PF00226 DnaJ domain B5S57_02390 PF01556 DnaJ C terminal domain B5S57_02390 PF00684 DnaJ central domain B5S57_02410 PF13419 Haloacid dehalogenase-like hydrolase B5S57_02420 PF04986 Putative transposase B5S57_02420 PF14319 Transposase zinc-binding domain B5S57_02440 PF00294 pfkB family carbohydrate kinase B5S57_02445 PF00990 Diguanylate cyclase, GGDEF domain B5S57_02445 PF00563 EAL domain B5S57_02445 PF03707 Bacterial signalling protein N terminal repeat B5S57_02445 PF13188 PAS domain B5S57_02450 PF00194 Eukaryotic-type carbonic anhydrase B5S57_02460 PF02743 Cache domain B5S57_02460 PF00672 HAMP domain B5S57_02460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_02465 PF00491 Arginase family B5S57_02470 PF17944 Arginine decarboxylase C-terminal helical extension B5S57_02470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B5S57_02470 PF17810 Arginine decarboxylase helical bundle domain B5S57_02480 PF00571 CBS domain B5S57_02480 PF00005 ABC transporter B5S57_02485 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_02490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system B5S57_02505 PF03448 MgtE intracellular N domain B5S57_02505 PF01769 Divalent cation transporter B5S57_02505 PF00571 CBS domain B5S57_02510 PF13840 ACT domain B5S57_02510 PF00696 Amino acid kinase family B5S57_02515 PF06339 Ectoine synthase B5S57_02520 PF00202 Aminotransferase class-III B5S57_02525 PF00583 Acetyltransferase (GNAT) family B5S57_02535 PF01467 Cytidylyltransferase-like B5S57_02540 PF02540 NAD synthase B5S57_02570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_02570 PF00672 HAMP domain B5S57_02570 PF02743 Cache domain B5S57_02575 PF00128 Alpha amylase, catalytic domain B5S57_02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_02590 PF00672 HAMP domain B5S57_02590 PF02743 Cache domain B5S57_02595 PF07726 ATPase family associated with various cellular activities (AAA) B5S57_02595 PF17863 AAA lid domain B5S57_02600 PF01882 Protein of unknown function DUF58 B5S57_02615 PF13519 von Willebrand factor type A domain B5S57_02635 PF14319 Transposase zinc-binding domain B5S57_02635 PF04986 Putative transposase B5S57_02650 PF01844 HNH endonuclease B5S57_02655 PF12843 Putative quorum-sensing-regulated virulence factor B5S57_02660 PF00884 Sulfatase B5S57_02670 PF01219 Prokaryotic diacylglycerol kinase B5S57_02675 PF08240 Alcohol dehydrogenase GroES-like domain B5S57_02675 PF00107 Zinc-binding dehydrogenase B5S57_02805 PF01548 Transposase B5S57_02805 PF02371 Transposase IS116/IS110/IS902 family B5S57_02815 PF00005 ABC transporter B5S57_02815 PF03412 Peptidase C39 family B5S57_02815 PF00664 ABC transporter transmembrane region B5S57_02820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_02820 PF00529 HlyD membrane-fusion protein of T1SS B5S57_02825 PF00535 Glycosyl transferase family 2 B5S57_02860 PF00717 Peptidase S24-like B5S57_02885 PF03354 Phage Terminase B5S57_02900 PF01381 Helix-turn-helix B5S57_02900 PF00717 Peptidase S24-like B5S57_02915 PF12167 Arm DNA-binding domain B5S57_02915 PF00589 Phage integrase family B5S57_02925 PF07728 AAA domain (dynein-related subfamily) B5S57_02930 PF00145 C-5 cytosine-specific DNA methylase B5S57_02930 PF01381 Helix-turn-helix B5S57_02935 PF00107 Zinc-binding dehydrogenase B5S57_02935 PF08240 Alcohol dehydrogenase GroES-like domain B5S57_02940 PF00155 Aminotransferase class I and II B5S57_02945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_02945 PF03466 LysR substrate binding domain B5S57_02950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B5S57_02960 PF07690 Major Facilitator Superfamily B5S57_02965 PF00072 Response regulator receiver domain B5S57_02965 PF00196 Bacterial regulatory proteins, luxR family B5S57_02970 PF07730 Histidine kinase B5S57_02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_02970 PF05231 MASE1 B5S57_02975 PF07690 Major Facilitator Superfamily B5S57_02995 PF04013 Putative SAM-dependent RNA methyltransferase B5S57_03010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_03010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B5S57_03015 PF01022 Bacterial regulatory protein, arsR family B5S57_03020 PF01758 Sodium Bile acid symporter family B5S57_03030 PF01740 STAS domain B5S57_03030 PF00916 Sulfate permease family B5S57_03035 PF00582 Universal stress protein family B5S57_03040 PF17327 Acyl homoserine lactone synthase B5S57_03045 PF00072 Response regulator receiver domain B5S57_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_03050 PF00478 IMP dehydrogenase / GMP reductase domain B5S57_03055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B5S57_03055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B5S57_03080 PF00313 'Cold-shock' DNA-binding domain B5S57_03085 PF07152 YaeQ protein B5S57_03095 PF01590 GAF domain B5S57_03095 PF00158 Sigma-54 interaction domain B5S57_03110 PF07662 Na+ dependent nucleoside transporter C-terminus B5S57_03110 PF01773 Na+ dependent nucleoside transporter N-terminus B5S57_03110 PF07670 Nucleoside recognition B5S57_03115 PF03473 MOSC domain B5S57_03115 PF03476 MOSC N-terminal beta barrel domain B5S57_03115 PF00111 2Fe-2S iron-sulfur cluster binding domain B5S57_03125 PF05958 tRNA (Uracil-5-)-methyltransferase B5S57_03130 PF05661 Protein of unknown function (DUF808) B5S57_03165 PF18269 T3SS EscN ATPase C-terminal domain B5S57_03165 PF02874 ATP synthase alpha/beta family, beta-barrel domain B5S57_03165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B5S57_03180 PF13737 Transposase DDE domain B5S57_03185 PF00563 EAL domain B5S57_03185 PF00990 Diguanylate cyclase, GGDEF domain B5S57_03185 PF03707 Bacterial signalling protein N terminal repeat B5S57_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_03200 PF03466 LysR substrate binding domain B5S57_03205 PF00990 Diguanylate cyclase, GGDEF domain B5S57_03205 PF00563 EAL domain B5S57_03215 PF02678 Pirin B5S57_03215 PF05726 Pirin C-terminal cupin domain B5S57_03225 PF06865 Pyrimidine/purine nucleoside phosphorylase B5S57_03235 PF00793 DAHP synthetase I family B5S57_03240 PF00005 ABC transporter B5S57_03245 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_03250 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_03255 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_03260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B5S57_03260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B5S57_03260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B5S57_03260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B5S57_03280 PF01557 Fumarylacetoacetate (FAA) hydrolase family B5S57_03290 PF00892 EamA-like transporter family B5S57_03295 PF00462 Glutaredoxin B5S57_03305 PF07690 Major Facilitator Superfamily B5S57_03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_03310 PF03466 LysR substrate binding domain B5S57_03315 PF00563 EAL domain B5S57_03315 PF00990 Diguanylate cyclase, GGDEF domain B5S57_03315 PF08447 PAS fold B5S57_03315 PF08448 PAS fold B5S57_03320 PF01476 LysM domain B5S57_03320 PF01551 Peptidase family M23 B5S57_03320 PF08525 Opacity-associated protein A N-terminal motif B5S57_03330 PF00916 Sulfate permease family B5S57_03330 PF01740 STAS domain B5S57_03345 PF07694 5TMR of 5TMR-LYT B5S57_03345 PF00990 Diguanylate cyclase, GGDEF domain B5S57_03350 PF00005 ABC transporter B5S57_03355 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_03360 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_03365 PF12849 PBP superfamily domain B5S57_03375 PF00155 Aminotransferase class I and II B5S57_03375 PF00392 Bacterial regulatory proteins, gntR family B5S57_03380 PF13302 Acetyltransferase (GNAT) domain B5S57_03395 PF01447 Thermolysin metallopeptidase, catalytic domain B5S57_03395 PF04151 Bacterial pre-peptidase C-terminal domain B5S57_03395 PF07504 Fungalysin/Thermolysin Propeptide Motif B5S57_03395 PF03413 Peptidase propeptide and YPEB domain B5S57_03395 PF02868 Thermolysin metallopeptidase, alpha-helical domain B5S57_03400 PF03922 OmpW family B5S57_03410 PF18416 N-acetylglucosamine binding protein domain 2 B5S57_03410 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading B5S57_03415 PF07690 Major Facilitator Superfamily B5S57_03420 PF03009 Glycerophosphoryl diester phosphodiesterase family B5S57_03425 PF03466 LysR substrate binding domain B5S57_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_03430 PF03306 Alpha-acetolactate decarboxylase B5S57_03435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B5S57_03435 PF00205 Thiamine pyrophosphate enzyme, central domain B5S57_03435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B5S57_03455 PF03466 LysR substrate binding domain B5S57_03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_03460 PF02652 L-lactate permease B5S57_03465 PF01070 FMN-dependent dehydrogenase B5S57_03480 PF01161 Phosphatidylethanolamine-binding protein B5S57_03485 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) B5S57_03495 PF03372 Endonuclease/Exonuclease/phosphatase family B5S57_03510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03510 PF00672 HAMP domain B5S57_03515 PF00356 Bacterial regulatory proteins, lacI family B5S57_03520 PF14310 Fibronectin type III-like domain B5S57_03520 PF00933 Glycosyl hydrolase family 3 N terminal domain B5S57_03520 PF01915 Glycosyl hydrolase family 3 C-terminal domain B5S57_03525 PF00005 ABC transporter B5S57_03525 PF17912 MalK OB fold domain B5S57_03530 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_03535 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_03545 PF00356 Bacterial regulatory proteins, lacI family B5S57_03550 PF02264 LamB porin B5S57_03555 PF01554 MatE B5S57_03570 PF07690 Major Facilitator Superfamily B5S57_03575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03575 PF00672 HAMP domain B5S57_03580 PF13654 AAA domain B5S57_03580 PF05362 Lon protease (S16) C-terminal proteolytic domain B5S57_03590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain B5S57_03590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain B5S57_03595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase B5S57_03600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B5S57_03600 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain B5S57_03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_03605 PF03466 LysR substrate binding domain B5S57_03620 PF04986 Putative transposase B5S57_03620 PF14319 Transposase zinc-binding domain B5S57_03630 PF00356 Bacterial regulatory proteins, lacI family B5S57_03635 PF00294 pfkB family carbohydrate kinase B5S57_03640 PF13407 Periplasmic binding protein domain B5S57_03645 PF02653 Branched-chain amino acid transport system / permease component B5S57_03650 PF00005 ABC transporter B5S57_03655 PF05025 RbsD / FucU transport protein family B5S57_03670 PF04717 Type VI secretion system, phage-baseplate injector B5S57_03670 PF16671 Actin cross-linking domain B5S57_03675 PF05638 Type VI secretion system effector, Hcp B5S57_03680 PF00128 Alpha amylase, catalytic domain B5S57_03680 PF02806 Alpha amylase, C-terminal all-beta domain B5S57_03680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B5S57_03685 PF02446 4-alpha-glucanotransferase B5S57_03690 PF00343 Carbohydrate phosphorylase B5S57_03695 PF00196 Bacterial regulatory proteins, luxR family B5S57_03695 PF17874 MalT-like TPR region B5S57_03700 PF10928 Protein of unknown function (DUF2810) B5S57_03705 PF00672 HAMP domain B5S57_03705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03705 PF17200 Single Cache domain 2 B5S57_03715 PF02743 Cache domain B5S57_03715 PF00672 HAMP domain B5S57_03715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B5S57_03730 PF00171 Aldehyde dehydrogenase family B5S57_03735 PF01037 Lrp/AsnC ligand binding domain B5S57_03740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03740 PF00672 HAMP domain B5S57_03740 PF02743 Cache domain B5S57_03750 PF00474 Sodium:solute symporter family B5S57_03760 PF00171 Aldehyde dehydrogenase family B5S57_03760 PF01619 Proline dehydrogenase B5S57_03760 PF18327 Proline utilization A proline dehydrogenase N-terminal domain B5S57_03760 PF14850 DNA-binding domain of Proline dehydrogenase B5S57_03765 PF12833 Helix-turn-helix domain B5S57_03775 PF03781 Sulfatase-modifying factor enzyme 1 B5S57_03785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region B5S57_03785 PF01243 Pyridoxamine 5'-phosphate oxidase B5S57_03790 PF00529 HlyD membrane-fusion protein of T1SS B5S57_03805 PF00664 ABC transporter transmembrane region B5S57_03805 PF03412 Peptidase C39 family B5S57_03805 PF00005 ABC transporter B5S57_03815 PF00990 Diguanylate cyclase, GGDEF domain B5S57_03815 PF00072 Response regulator receiver domain B5S57_03825 PF00672 HAMP domain B5S57_03825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03825 PF02743 Cache domain B5S57_03830 PF01339 CheB methylesterase B5S57_03830 PF00072 Response regulator receiver domain B5S57_03835 PF03975 CheD chemotactic sensory transduction B5S57_03840 PF03705 CheR methyltransferase, all-alpha domain B5S57_03840 PF01739 CheR methyltransferase, SAM binding domain B5S57_03845 PF02203 Tar ligand binding domain homologue B5S57_03845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_03845 PF00672 HAMP domain B5S57_03850 PF01584 CheW-like domain B5S57_03855 PF01584 CheW-like domain B5S57_03865 PF14319 Transposase zinc-binding domain B5S57_03865 PF04986 Putative transposase B5S57_03870 PF02895 Signal transducing histidine kinase, homodimeric domain B5S57_03870 PF01584 CheW-like domain B5S57_03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_03870 PF01627 Hpt domain B5S57_03875 PF00072 Response regulator receiver domain B5S57_03875 PF00486 Transcriptional regulatory protein, C terminal B5S57_03885 PF13718 GNAT acetyltransferase 2 B5S57_03885 PF05127 Helicase B5S57_03895 PF14319 Transposase zinc-binding domain B5S57_03895 PF04986 Putative transposase B5S57_03905 PF02195 ParB-like nuclease domain B5S57_03905 PF08775 ParB family B5S57_03910 PF13614 AAA domain B5S57_03910 PF18607 ParA helix turn helix domain B5S57_03935 PF01709 Transcriptional regulator B5S57_03945 PF14319 Transposase zinc-binding domain B5S57_03945 PF04986 Putative transposase B5S57_03950 PF03222 Tryptophan/tyrosine permease family B5S57_03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_03980 PF03466 LysR substrate binding domain B5S57_03985 PF13460 NAD(P)H-binding B5S57_03995 PF03733 Inner membrane component domain B5S57_04010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B5S57_04010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain B5S57_04015 PF00730 HhH-GPD superfamily base excision DNA repair protein B5S57_04015 PF06029 AlkA N-terminal domain B5S57_04020 PF03466 LysR substrate binding domain B5S57_04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_04035 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase B5S57_04045 PF01551 Peptidase family M23 B5S57_04045 PF04225 Opacity-associated protein A LysM-like domain B5S57_04050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B5S57_04050 PF02378 Phosphotransferase system, EIIC B5S57_04050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B5S57_04055 PF08125 Mannitol dehydrogenase C-terminal domain B5S57_04055 PF01232 Mannitol dehydrogenase Rossmann domain B5S57_04060 PF05068 Mannitol repressor B5S57_04065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B5S57_04070 PF03600 Citrate transporter B5S57_04075 PF00375 Sodium:dicarboxylate symporter family B5S57_04080 PF07681 DoxX B5S57_04100 PF00529 HlyD membrane-fusion protein of T1SS B5S57_04100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_04105 PF01047 MarR family B5S57_04110 PF04393 Protein of unknown function (DUF535) B5S57_04115 PF00563 EAL domain B5S57_04115 PF12792 CSS motif domain associated with EAL B5S57_04120 PF04244 Deoxyribodipyrimidine photo-lyase-related protein B5S57_04125 PF00581 Rhodanese-like domain B5S57_04135 PF00005 ABC transporter B5S57_04150 PF00005 ABC transporter B5S57_04150 PF08402 TOBE domain B5S57_04160 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_04175 PF00392 Bacterial regulatory proteins, gntR family B5S57_04175 PF07702 UTRA domain B5S57_04180 PF00270 DEAD/DEAH box helicase B5S57_04180 PF00271 Helicase conserved C-terminal domain B5S57_04185 PF01042 Endoribonuclease L-PSP B5S57_04190 PF13419 Haloacid dehalogenase-like hydrolase B5S57_04200 PF04055 Radical SAM superfamily B5S57_04205 PF11230 Protein of unknown function (DUF3029) B5S57_04215 PF00107 Zinc-binding dehydrogenase B5S57_04215 PF16884 N-terminal domain of oxidoreductase B5S57_04220 PF00440 Bacterial regulatory proteins, tetR family B5S57_04220 PF16925 Tetracyclin repressor-like, C-terminal domain B5S57_04235 PF00486 Transcriptional regulatory protein, C terminal B5S57_04235 PF00072 Response regulator receiver domain B5S57_04245 PF00849 RNA pseudouridylate synthase B5S57_04255 PF13737 Transposase DDE domain B5S57_04305 PF07724 AAA domain (Cdc48 subfamily) B5S57_04305 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_04305 PF10431 C-terminal, D2-small domain, of ClpB protein B5S57_04305 PF17871 AAA lid domain B5S57_04335 PF04717 Type VI secretion system, phage-baseplate injector B5S57_04335 PF16671 Actin cross-linking domain B5S57_04390 PF00939 Sodium:sulfate symporter transmembrane region B5S57_04395 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) B5S57_04400 PF08329 Chitinase A, N-terminal domain B5S57_04400 PF00704 Glycosyl hydrolases family 18 B5S57_04405 PF00392 Bacterial regulatory proteins, gntR family B5S57_04405 PF07702 UTRA domain B5S57_04410 PF00005 ABC transporter B5S57_04420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_04420 PF00672 HAMP domain B5S57_04420 PF02743 Cache domain B5S57_04435 PF02743 Cache domain B5S57_04435 PF00672 HAMP domain B5S57_04435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_04450 PF01569 PAP2 superfamily B5S57_04455 PF04286 Protein of unknown function (DUF445) B5S57_04460 PF00005 ABC transporter B5S57_04460 PF00664 ABC transporter transmembrane region B5S57_04470 PF00563 EAL domain B5S57_04470 PF00990 Diguanylate cyclase, GGDEF domain B5S57_04470 PF03707 Bacterial signalling protein N terminal repeat B5S57_04480 PF01261 Xylose isomerase-like TIM barrel B5S57_04485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B5S57_04495 PF00596 Class II Aldolase and Adducin N-terminal domain B5S57_04500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B5S57_04505 PF03611 PTS system sugar-specific permease component B5S57_04510 PF08220 DeoR-like helix-turn-helix domain B5S57_04510 PF00455 DeoR C terminal sensor domain B5S57_04520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B5S57_04520 PF00128 Alpha amylase, catalytic domain B5S57_04525 PF02264 LamB porin B5S57_04540 PF01547 Bacterial extracellular solute-binding protein B5S57_04545 PF03466 LysR substrate binding domain B5S57_04545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_04560 PF00375 Sodium:dicarboxylate symporter family B5S57_04570 PF02630 SCO1/SenC B5S57_04585 PF03616 Sodium/glutamate symporter B5S57_04590 PF07238 PilZ domain B5S57_04590 PF12945 Flagellar protein YcgR B5S57_04610 PF00529 HlyD membrane-fusion protein of T1SS B5S57_04610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_04615 PF11742 Protein of unknown function (DUF3302) B5S57_04620 PF00990 Diguanylate cyclase, GGDEF domain B5S57_04635 PF01048 Phosphorylase superfamily B5S57_04640 PF08349 Protein of unknown function (DUF1722) B5S57_04645 PF13411 MerR HTH family regulatory protein B5S57_04650 PF00875 DNA photolyase B5S57_04650 PF03441 FAD binding domain of DNA photolyase B5S57_04655 PF17969 L,D-transpeptidase C-terminal domain B5S57_04655 PF01476 LysM domain B5S57_04655 PF03734 L,D-transpeptidase catalytic domain B5S57_04665 PF00270 DEAD/DEAH box helicase B5S57_04665 PF00271 Helicase conserved C-terminal domain B5S57_04675 PF07715 TonB-dependent Receptor Plug Domain B5S57_04675 PF00593 TonB dependent receptor B5S57_04700 PF14319 Transposase zinc-binding domain B5S57_04700 PF04986 Putative transposase B5S57_04705 PF00128 Alpha amylase, catalytic domain B5S57_04710 PF00248 Aldo/keto reductase family B5S57_04720 PF12704 MacB-like periplasmic core domain B5S57_04720 PF00005 ABC transporter B5S57_04720 PF02687 FtsX-like permease family B5S57_04725 PF02687 FtsX-like permease family B5S57_04725 PF12704 MacB-like periplasmic core domain B5S57_04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_04740 PF06580 Histidine kinase B5S57_04745 PF00072 Response regulator receiver domain B5S57_04745 PF04397 LytTr DNA-binding domain B5S57_04750 PF00563 EAL domain B5S57_04750 PF01590 GAF domain B5S57_04750 PF00990 Diguanylate cyclase, GGDEF domain B5S57_04750 PF00360 Phytochrome region B5S57_04760 PF03605 Anaerobic c4-dicarboxylate membrane transporter B5S57_04770 PF00072 Response regulator receiver domain B5S57_04775 PF01627 Hpt domain B5S57_04775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B5S57_04775 PF00072 Response regulator receiver domain B5S57_04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_04775 PF00672 HAMP domain B5S57_04775 PF00512 His Kinase A (phospho-acceptor) domain B5S57_04780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_04780 PF00672 HAMP domain B5S57_04785 PF13520 Amino acid permease B5S57_04805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_04805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B5S57_04810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B5S57_04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_04810 PF00512 His Kinase A (phospho-acceptor) domain B5S57_04810 PF01627 Hpt domain B5S57_04810 PF00072 Response regulator receiver domain B5S57_04810 PF00672 HAMP domain B5S57_04825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_04830 PF00873 AcrB/AcrD/AcrF family B5S57_04840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B5S57_04845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B5S57_04850 PF02566 OsmC-like protein B5S57_04855 PF12464 Maltose acetyltransferase B5S57_04855 PF14602 Hexapeptide repeat of succinyl-transferase B5S57_04860 PF00892 EamA-like transporter family B5S57_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_04870 PF03466 LysR substrate binding domain B5S57_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_04880 PF03466 LysR substrate binding domain B5S57_04885 PF13193 AMP-binding enzyme C-terminal domain B5S57_04885 PF00501 AMP-binding enzyme B5S57_04890 PF00351 Biopterin-dependent aromatic amino acid hydroxylase B5S57_04895 PF01329 Pterin 4 alpha carbinolamine dehydratase B5S57_04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_04900 PF02743 Cache domain B5S57_04900 PF00672 HAMP domain B5S57_04905 PF01554 MatE B5S57_04910 PF12833 Helix-turn-helix domain B5S57_04910 PF02311 AraC-like ligand binding domain B5S57_04915 PF11849 Domain of unknown function (DUF3369) B5S57_04920 PF00512 His Kinase A (phospho-acceptor) domain B5S57_04920 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_04930 PF07690 Major Facilitator Superfamily B5S57_04940 PF00012 Hsp70 protein B5S57_04950 PF01037 Lrp/AsnC ligand binding domain B5S57_04955 PF00657 GDSL-like Lipase/Acylhydrolase B5S57_04960 PF07968 Leukocidin/Hemolysin toxin family B5S57_04960 PF16458 Beta-prism lectin B5S57_04960 PF12563 Hemolytic toxin N terminal B5S57_04965 PF00561 alpha/beta hydrolase fold B5S57_04970 PF03280 Proteobacterial lipase chaperone protein B5S57_04975 PF00801 PKD domain B5S57_04975 PF05547 Immune inhibitor A peptidase M6 B5S57_04990 PF04151 Bacterial pre-peptidase C-terminal domain B5S57_04990 PF08453 Peptidase family M9 N-terminal B5S57_04990 PF01752 Collagenase B5S57_04995 PF13737 Transposase DDE domain B5S57_05000 PF08453 Peptidase family M9 N-terminal B5S57_05000 PF04151 Bacterial pre-peptidase C-terminal domain B5S57_05000 PF01752 Collagenase B5S57_05010 PF01497 Periplasmic binding protein B5S57_05015 PF01032 FecCD transport family B5S57_05020 PF01032 FecCD transport family B5S57_05025 PF00005 ABC transporter B5S57_05030 PF00871 Acetokinase family B5S57_05035 PF00579 tRNA synthetases class I (W and Y) B5S57_05040 PF00196 Bacterial regulatory proteins, luxR family B5S57_05050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) B5S57_05075 PF03050 Transposase IS66 family B5S57_05075 PF13817 IS66 C-terminal element B5S57_05075 PF13007 Transposase C of IS166 homeodomain B5S57_05075 PF13005 zinc-finger binding domain of transposase IS66 B5S57_05090 PF13599 Pentapeptide repeats (9 copies) B5S57_05100 PF13005 zinc-finger binding domain of transposase IS66 B5S57_05100 PF13007 Transposase C of IS166 homeodomain B5S57_05100 PF13817 IS66 C-terminal element B5S57_05100 PF03050 Transposase IS66 family B5S57_05125 PF00155 Aminotransferase class I and II B5S57_05130 PF18030 RimK PreATP-grasp domain B5S57_05130 PF08443 RimK-like ATP-grasp domain B5S57_05145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B5S57_05150 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_05155 PF12911 N-terminal TM domain of oligopeptide transport permease C B5S57_05155 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_05160 PF00005 ABC transporter B5S57_05160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_05165 PF00563 EAL domain B5S57_05165 PF01590 GAF domain B5S57_05165 PF00360 Phytochrome region B5S57_05165 PF00990 Diguanylate cyclase, GGDEF domain B5S57_05175 PF01292 Prokaryotic cytochrome b561 B5S57_05180 PF04264 YceI-like domain B5S57_05185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_05185 PF00672 HAMP domain B5S57_05185 PF12729 Four helix bundle sensory module for signal transduction B5S57_05190 PF13419 Haloacid dehalogenase-like hydrolase B5S57_05195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B5S57_05195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B5S57_05210 PF00456 Transketolase, thiamine diphosphate binding domain B5S57_05210 PF02780 Transketolase, C-terminal domain B5S57_05210 PF02779 Transketolase, pyrimidine binding domain B5S57_05215 PF00923 Transaldolase/Fructose-6-phosphate aldolase B5S57_05225 PF08329 Chitinase A, N-terminal domain B5S57_05225 PF00704 Glycosyl hydrolases family 18 B5S57_05230 PF00581 Rhodanese-like domain B5S57_05235 PF00899 ThiF family B5S57_05240 PF03454 MoeA C-terminal region (domain IV) B5S57_05240 PF03453 MoeA N-terminal region (domain I and II) B5S57_05240 PF00994 Probable molybdopterin binding domain B5S57_05245 PF01227 GTP cyclohydrolase I B5S57_05250 PF01625 Peptide methionine sulfoxide reductase B5S57_05250 PF01641 SelR domain B5S57_05255 PF01268 Formate--tetrahydrofolate ligase B5S57_05260 PF00588 SpoU rRNA Methylase family B5S57_05260 PF08032 RNA 2'-O ribose methyltransferase substrate binding B5S57_05265 PF00037 4Fe-4S binding domain B5S57_05265 PF11953 Domain of unknown function (DUF3470) B5S57_05280 PF13419 Haloacid dehalogenase-like hydrolase B5S57_05285 PF01272 Transcription elongation factor, GreA/GreB, C-term B5S57_05285 PF14760 Rnk N-terminus B5S57_05290 PF00392 Bacterial regulatory proteins, gntR family B5S57_05290 PF07702 UTRA domain B5S57_05300 PF00854 POT family B5S57_05310 PF01226 Formate/nitrite transporter B5S57_05315 PF03466 LysR substrate binding domain B5S57_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_05320 PF06496 Protein of unknown function (DUF1097) B5S57_05325 PF11398 Protein of unknown function (DUF2813) B5S57_05330 PF00149 Calcineurin-like phosphoesterase B5S57_05330 PF02872 5'-nucleotidase, C-terminal domain B5S57_05335 PF03741 Integral membrane protein TerC family B5S57_05340 PF13005 zinc-finger binding domain of transposase IS66 B5S57_05340 PF13007 Transposase C of IS166 homeodomain B5S57_05340 PF13817 IS66 C-terminal element B5S57_05340 PF03050 Transposase IS66 family B5S57_05360 PF08242 Methyltransferase domain B5S57_05375 PF03050 Transposase IS66 family B5S57_05375 PF13817 IS66 C-terminal element B5S57_05375 PF13007 Transposase C of IS166 homeodomain B5S57_05375 PF13005 zinc-finger binding domain of transposase IS66 B5S57_05405 PF05016 ParE toxin of type II toxin-antitoxin system, parDE B5S57_05465 PF13817 IS66 C-terminal element B5S57_05465 PF13007 Transposase C of IS166 homeodomain B5S57_05465 PF13005 zinc-finger binding domain of transposase IS66 B5S57_05465 PF03050 Transposase IS66 family B5S57_05540 PF13335 Magnesium chelatase, subunit ChlI C-terminal B5S57_05540 PF01078 Magnesium chelatase, subunit ChlI B5S57_05545 PF00205 Thiamine pyrophosphate enzyme, central domain B5S57_05545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B5S57_05545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B5S57_05555 PF01063 Amino-transferase class IV B5S57_05560 PF00920 Dehydratase family B5S57_05565 PF00291 Pyridoxal-phosphate dependent enzyme B5S57_05565 PF00585 C-terminal regulatory domain of Threonine dehydratase B5S57_05570 PF08240 Alcohol dehydrogenase GroES-like domain B5S57_05570 PF00107 Zinc-binding dehydrogenase B5S57_05575 PF03466 LysR substrate binding domain B5S57_05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_05585 PF01206 Sulfurtransferase TusA B5S57_05595 PF01169 Uncharacterized protein family UPF0016 B5S57_05600 PF02091 Glycyl-tRNA synthetase alpha subunit B5S57_05605 PF05746 DALR anticodon binding domain B5S57_05605 PF02092 Glycyl-tRNA synthetase beta subunit B5S57_05610 PF00155 Aminotransferase class I and II B5S57_05615 PF00011 Hsp20/alpha crystallin family B5S57_05625 PF00986 DNA gyrase B subunit, carboxyl terminus B5S57_05625 PF00204 DNA gyrase B B5S57_05625 PF18053 DNA gyrase B subunit insert domain B5S57_05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_05625 PF01751 Toprim domain B5S57_05630 PF02463 RecF/RecN/SMC N terminal domain B5S57_05635 PF00712 DNA polymerase III beta subunit, N-terminal domain B5S57_05635 PF02768 DNA polymerase III beta subunit, C-terminal domain B5S57_05635 PF02767 DNA polymerase III beta subunit, central domain B5S57_05640 PF08299 Bacterial dnaA protein helix-turn-helix B5S57_05640 PF11638 DnaA N-terminal domain B5S57_05640 PF00308 Bacterial dnaA protein B5S57_05645 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_05650 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_05655 PF00005 ABC transporter B5S57_05660 PF00468 Ribosomal protein L34 B5S57_05665 PF00825 Ribonuclease P B5S57_05670 PF01809 Putative membrane protein insertion efficiency factor B5S57_05675 PF14849 YidC periplasmic domain B5S57_05675 PF02096 60Kd inner membrane protein B5S57_05680 PF12631 MnmE helical domain B5S57_05680 PF10396 GTP-binding protein TrmE N-terminus B5S57_05680 PF01926 50S ribosome-binding GTPase B5S57_05685 PF00258 Flavodoxin B5S57_05690 PF13932 GidA associated domain B5S57_05690 PF01134 Glucose inhibited division protein A B5S57_05695 PF02527 rRNA small subunit methyltransferase G B5S57_05700 PF13614 AAA domain B5S57_05705 PF17762 HTH domain found in ParB protein B5S57_05705 PF02195 ParB-like nuclease domain B5S57_05710 PF03899 ATP synthase I chain B5S57_05715 PF00119 ATP synthase A chain B5S57_05720 PF00137 ATP synthase subunit C B5S57_05725 PF00430 ATP synthase B/B' CF(0) B5S57_05730 PF00213 ATP synthase delta (OSCP) subunit B5S57_05735 PF02874 ATP synthase alpha/beta family, beta-barrel domain B5S57_05735 PF00306 ATP synthase alpha/beta chain, C terminal domain B5S57_05735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B5S57_05740 PF00231 ATP synthase B5S57_05745 PF02874 ATP synthase alpha/beta family, beta-barrel domain B5S57_05745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B5S57_05750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain B5S57_05750 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain B5S57_05755 PF12804 MobA-like NTP transferase domain B5S57_05755 PF14602 Hexapeptide repeat of succinyl-transferase B5S57_05755 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_05760 PF07690 Major Facilitator Superfamily B5S57_05765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_05765 PF03466 LysR substrate binding domain B5S57_05770 PF02803 Thiolase, C-terminal domain B5S57_05770 PF00108 Thiolase, N-terminal domain B5S57_05775 PF00378 Enoyl-CoA hydratase/isomerase B5S57_05775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B5S57_05775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B5S57_05780 PF01205 Uncharacterized protein family UPF0029 B5S57_05780 PF09186 Domain of unknown function (DUF1949) B5S57_05785 PF02386 Cation transport protein B5S57_05790 PF12724 Flavodoxin domain B5S57_05835 PF02537 CrcB-like protein, Camphor Resistance (CrcB) B5S57_05840 PF01964 Radical SAM ThiC family B5S57_05840 PF13667 ThiC-associated domain B5S57_05845 PF02581 Thiamine monophosphate synthase B5S57_05850 PF00899 ThiF family B5S57_05855 PF02597 ThiS family B5S57_05860 PF05690 Thiazole biosynthesis protein ThiG B5S57_05865 PF06968 Biotin and Thiamin Synthesis associated domain B5S57_05865 PF04055 Radical SAM superfamily B5S57_05870 PF01321 Creatinase/Prolidase N-terminal domain B5S57_05870 PF01321 Creatinase/Prolidase N-terminal domain B5S57_05870 PF00557 Metallopeptidase family M24 B5S57_05870 PF00557 Metallopeptidase family M24 B5S57_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_05875 PF03466 LysR substrate binding domain B5S57_05880 PF07690 Major Facilitator Superfamily B5S57_05885 PF13737 Transposase DDE domain B5S57_05895 PF01037 Lrp/AsnC ligand binding domain B5S57_05900 PF04445 Putative SAM-dependent methyltransferase B5S57_05910 PF00892 EamA-like transporter family B5S57_05915 PF00582 Universal stress protein family B5S57_05920 PF00210 Ferritin-like domain B5S57_05925 PF10625 Universal stress protein B (UspB) B5S57_05940 PF06414 Zeta toxin B5S57_05945 PF02653 Branched-chain amino acid transport system / permease component B5S57_05950 PF00005 ABC transporter B5S57_05955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family B5S57_05960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain B5S57_05960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain B5S57_05965 PF00596 Class II Aldolase and Adducin N-terminal domain B5S57_05970 PF02610 L-arabinose isomerase B5S57_05970 PF11762 L-arabinose isomerase C-terminal domain B5S57_05980 PF12833 Helix-turn-helix domain B5S57_05980 PF02311 AraC-like ligand binding domain B5S57_05990 PF02646 RmuC family B5S57_05995 PF01209 ubiE/COQ5 methyltransferase family B5S57_06000 PF02036 SCP-2 sterol transfer family B5S57_06005 PF03109 ABC1 family B5S57_06010 PF02416 mttA/Hcf106 family B5S57_06015 PF02416 mttA/Hcf106 family B5S57_06020 PF00902 Sec-independent protein translocase protein (TatC) B5S57_06025 PF01026 TatD related DNase B5S57_06030 PF00490 Delta-aminolevulinic acid dehydratase B5S57_06035 PF00476 DNA polymerase family A B5S57_06035 PF01367 5'-3' exonuclease, C-terminal SAM fold B5S57_06035 PF01612 3'-5' exonuclease B5S57_06035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B5S57_06040 PF01926 50S ribosome-binding GTPase B5S57_06045 PF00034 Cytochrome c B5S57_06055 PF04220 Der GTPase activator (YihI) B5S57_06060 PF10675 Protein of unknown function (DUF2489) B5S57_06065 PF06969 HemN C-terminal domain B5S57_06065 PF04055 Radical SAM superfamily B5S57_06070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_06070 PF03466 LysR substrate binding domain B5S57_06075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain B5S57_06075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain B5S57_06080 PF04380 Membrane fusogenic activity B5S57_06085 PF00873 AcrB/AcrD/AcrF family B5S57_06090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_06095 PF08359 YsiA-like protein, C-terminal region B5S57_06095 PF00440 Bacterial regulatory proteins, tetR family B5S57_06100 PF00580 UvrD/REP helicase N-terminal domain B5S57_06100 PF13361 UvrD-like helicase C-terminal domain B5S57_06105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B5S57_06135 PF00005 ABC transporter B5S57_06135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_06140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B5S57_06150 PF12911 N-terminal TM domain of oligopeptide transport permease C B5S57_06150 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_06165 PF00072 Response regulator receiver domain B5S57_06205 PF13007 Transposase C of IS166 homeodomain B5S57_06205 PF03050 Transposase IS66 family B5S57_06205 PF13817 IS66 C-terminal element B5S57_06205 PF13005 zinc-finger binding domain of transposase IS66 B5S57_06225 PF04245 37-kD nucleoid-associated bacterial protein B5S57_06245 PF13817 IS66 C-terminal element B5S57_06245 PF03050 Transposase IS66 family B5S57_06245 PF13007 Transposase C of IS166 homeodomain B5S57_06245 PF13005 zinc-finger binding domain of transposase IS66 B5S57_06255 PF13737 Transposase DDE domain B5S57_06260 PF07693 KAP family P-loop domain B5S57_06275 PF13737 Transposase DDE domain B5S57_06300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B5S57_06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_06305 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ B5S57_06310 PF01432 Peptidase family M3 B5S57_06315 PF00580 UvrD/REP helicase N-terminal domain B5S57_06315 PF13361 UvrD-like helicase C-terminal domain B5S57_06320 PF01810 LysE type translocator B5S57_06330 PF00892 EamA-like transporter family B5S57_06335 PF09382 RQC domain B5S57_06335 PF16124 RecQ zinc-binding B5S57_06335 PF00271 Helicase conserved C-terminal domain B5S57_06335 PF00270 DEAD/DEAH box helicase B5S57_06335 PF00570 HRDC domain B5S57_06350 PF01380 SIS domain B5S57_06350 PF01418 Helix-turn-helix domain, rpiR family B5S57_06355 PF01380 SIS domain B5S57_06360 PF02378 Phosphotransferase system, EIIC B5S57_06360 PF00367 phosphotransferase system, EIIB B5S57_06365 PF00005 ABC transporter B5S57_06365 PF00664 ABC transporter transmembrane region B5S57_06370 PF07715 TonB-dependent Receptor Plug Domain B5S57_06370 PF00593 TonB dependent receptor B5S57_06375 PF00005 ABC transporter B5S57_06380 PF01497 Periplasmic binding protein B5S57_06385 PF01032 FecCD transport family B5S57_06395 PF13737 Transposase DDE domain B5S57_06400 PF00675 Insulinase (Peptidase family M16) B5S57_06400 PF05193 Peptidase M16 inactive domain B5S57_06425 PF13007 Transposase C of IS166 homeodomain B5S57_06425 PF13817 IS66 C-terminal element B5S57_06425 PF03050 Transposase IS66 family B5S57_06425 PF13005 zinc-finger binding domain of transposase IS66 B5S57_06450 PF03050 Transposase IS66 family B5S57_06450 PF13817 IS66 C-terminal element B5S57_06450 PF13005 zinc-finger binding domain of transposase IS66 B5S57_06450 PF13007 Transposase C of IS166 homeodomain B5S57_06540 PF03755 YicC-like family, N-terminal region B5S57_06540 PF08340 Domain of unknown function (DUF1732) B5S57_06545 PF01138 3' exoribonuclease family, domain 1 B5S57_06545 PF03725 3' exoribonuclease family, domain 2 B5S57_06555 PF03279 Bacterial lipid A biosynthesis acyltransferase B5S57_06560 PF03279 Bacterial lipid A biosynthesis acyltransferase B5S57_06565 PF00440 Bacterial regulatory proteins, tetR family B5S57_06570 PF02441 Flavoprotein B5S57_06570 PF04127 DNA / pantothenate metabolism flavoprotein B5S57_06575 PF04002 RadC-like JAB domain B5S57_06585 PF00471 Ribosomal protein L33 B5S57_06595 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain B5S57_06595 PF06827 Zinc finger found in FPG and IleRS B5S57_06595 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain B5S57_06600 PF01467 Cytidylyltransferase-like B5S57_06605 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B5S57_06610 PF00535 Glycosyl transferase family 2 B5S57_06615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B5S57_06635 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B5S57_06640 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_06645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) B5S57_06650 PF04488 Glycosyltransferase sugar-binding region containing DXD motif B5S57_06660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B5S57_06665 PF04932 O-Antigen ligase B5S57_06675 PF01370 NAD dependent epimerase/dehydratase family B5S57_06680 PF16363 GDP-mannose 4,6 dehydratase B5S57_06685 PF00483 Nucleotidyl transferase B5S57_06690 PF04321 RmlD substrate binding domain B5S57_06695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase B5S57_06700 PF01061 ABC-2 type transporter B5S57_06705 PF00005 ABC transporter B5S57_06725 PF00970 Oxidoreductase FAD-binding domain B5S57_06725 PF00175 Oxidoreductase NAD-binding domain B5S57_06725 PF00111 2Fe-2S iron-sulfur cluster binding domain B5S57_06730 PF00483 Nucleotidyl transferase B5S57_06735 PF16363 GDP-mannose 4,6 dehydratase B5S57_06740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B5S57_06745 PF00205 Thiamine pyrophosphate enzyme, central domain B5S57_06745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B5S57_06745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B5S57_06755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B5S57_06765 PF00535 Glycosyl transferase family 2 B5S57_06775 PF05523 WxcM-like, C-terminal B5S57_06785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B5S57_06790 PF00535 Glycosyl transferase family 2 B5S57_06795 PF05045 Rhamnan synthesis protein F B5S57_06800 PF00535 Glycosyl transferase family 2 B5S57_06810 PF02719 Polysaccharide biosynthesis protein B5S57_06815 PF01370 NAD dependent epimerase/dehydratase family B5S57_06820 PF02397 Bacterial sugar transferase B5S57_06830 PF06082 Exopolysaccharide biosynthesis protein YbjH B5S57_06840 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF B5S57_06850 PF02563 Polysaccharide biosynthesis/export protein B5S57_06850 PF10531 SLBB domain B5S57_06850 PF18412 Outer-membrane lipoprotein Wza C-terminal domain B5S57_06855 PF01451 Low molecular weight phosphotyrosine protein phosphatase B5S57_06860 PF13614 AAA domain B5S57_06860 PF13807 G-rich domain on putative tyrosine kinase B5S57_06860 PF02706 Chain length determinant protein B5S57_06895 PF13439 Glycosyltransferase Family 4 B5S57_06895 PF00534 Glycosyl transferases group 1 B5S57_06900 PF01370 NAD dependent epimerase/dehydratase family B5S57_06905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B5S57_06905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B5S57_06905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B5S57_06910 PF00953 Glycosyl transferase family 4 B5S57_06915 PF10996 Beta-Casp domain B5S57_06915 PF00753 Metallo-beta-lactamase superfamily B5S57_06915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain B5S57_06920 PF02743 Cache domain B5S57_06920 PF00672 HAMP domain B5S57_06920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_06925 PF00924 Mechanosensitive ion channel B5S57_06930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B5S57_06935 PF04222 Protein of unknown function (DUF416) B5S57_06940 PF04480 Protein of unknown function (DUF559) B5S57_06945 PF00571 CBS domain B5S57_06945 PF01595 Cyclin M transmembrane N-terminal domain B5S57_06950 PF00216 Bacterial DNA-binding protein B5S57_06960 PF02844 Phosphoribosylglycinamide synthetase, N domain B5S57_06960 PF02843 Phosphoribosylglycinamide synthetase, C domain B5S57_06960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain B5S57_06965 PF01808 AICARFT/IMPCHase bienzyme B5S57_06965 PF02142 MGS-like domain B5S57_06970 PF13411 MerR HTH family regulatory protein B5S57_06980 PF02954 Bacterial regulatory protein, Fis family B5S57_06985 PF01207 Dihydrouridine synthase (Dus) B5S57_06995 PF02785 Biotin carboxylase C-terminal domain B5S57_06995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B5S57_06995 PF00289 Biotin carboxylase, N-terminal domain B5S57_07000 PF00364 Biotin-requiring enzyme B5S57_07005 PF01220 Dehydroquinase class II B5S57_07010 PF13193 AMP-binding enzyme C-terminal domain B5S57_07010 PF00501 AMP-binding enzyme B5S57_07010 PF16177 Acetyl-coenzyme A synthetase N-terminus B5S57_07025 PF12832 MFS_1 like family B5S57_07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_07030 PF00672 HAMP domain B5S57_07030 PF00072 Response regulator receiver domain B5S57_07030 PF01627 Hpt domain B5S57_07030 PF00512 His Kinase A (phospho-acceptor) domain B5S57_07035 PF00474 Sodium:solute symporter family B5S57_07045 PF03471 Transporter associated domain B5S57_07045 PF02080 TrkA-C domain B5S57_07045 PF00999 Sodium/hydrogen exchanger family B5S57_07050 PF00072 Response regulator receiver domain B5S57_07050 PF00196 Bacterial regulatory proteins, luxR family B5S57_07055 PF02683 Cytochrome C biogenesis protein transmembrane region B5S57_07055 PF11412 Disulphide bond corrector protein DsbC B5S57_07060 PF01316 Arginine repressor, DNA binding domain B5S57_07060 PF02863 Arginine repressor, C-terminal domain B5S57_07065 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain B5S57_07065 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain B5S57_07070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B5S57_07070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B5S57_07080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B5S57_07080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B5S57_07085 PF00696 Amino acid kinase family B5S57_07095 PF03606 C4-dicarboxylate anaerobic carrier B5S57_07100 PF03605 Anaerobic c4-dicarboxylate membrane transporter B5S57_07105 PF10415 Fumarase C C-terminus B5S57_07105 PF00206 Lyase B5S57_07110 PF04186 FxsA cytoplasmic membrane protein B5S57_07115 PF00313 'Cold-shock' DNA-binding domain B5S57_07120 PF00588 SpoU rRNA Methylase family B5S57_07125 PF00672 HAMP domain B5S57_07125 PF16527 Two-component sensor protein CpxA, periplasmic domain B5S57_07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_07125 PF00512 His Kinase A (phospho-acceptor) domain B5S57_07130 PF00072 Response regulator receiver domain B5S57_07130 PF00486 Transcriptional regulatory protein, C terminal B5S57_07140 PF16916 Dimerisation domain of Zinc Transporter B5S57_07140 PF01545 Cation efflux family B5S57_07145 PF00365 Phosphofructokinase B5S57_07150 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded B5S57_07160 PF02219 Methylenetetrahydrofolate reductase B5S57_07165 PF00696 Amino acid kinase family B5S57_07165 PF03447 Homoserine dehydrogenase, NAD binding domain B5S57_07165 PF00742 Homoserine dehydrogenase B5S57_07170 PF01053 Cys/Met metabolism PLP-dependent enzyme B5S57_07175 PF01340 Met Apo-repressor, MetJ B5S57_07180 PF03949 Malic enzyme, NAD binding domain B5S57_07180 PF00390 Malic enzyme, N-terminal domain B5S57_07185 PF01197 Ribosomal protein L31 B5S57_07190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain B5S57_07190 PF18074 Primosomal protein N C-terminal domain B5S57_07190 PF17764 3′ DNA-binding domain (3′BD) B5S57_07190 PF00271 Helicase conserved C-terminal domain B5S57_07190 PF00270 DEAD/DEAH box helicase B5S57_07195 PF00356 Bacterial regulatory proteins, lacI family B5S57_07205 PF00227 Proteasome subunit B5S57_07210 PF10431 C-terminal, D2-small domain, of ClpB protein B5S57_07210 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_07210 PF07724 AAA domain (Cdc48 subfamily) B5S57_07215 PF01040 UbiA prenyltransferase family B5S57_07220 PF03737 Aldolase/RraA B5S57_07225 PF01554 MatE B5S57_07230 PF00121 Triosephosphate isomerase B5S57_07255 PF00166 Chaperonin 10 Kd subunit B5S57_07260 PF00118 TCP-1/cpn60 chaperonin family B5S57_07270 PF02308 MgtC family B5S57_07275 PF04055 Radical SAM superfamily B5S57_07280 PF01132 Elongation factor P (EF-P) OB domain B5S57_07280 PF08207 Elongation factor P (EF-P) KOW-like domain B5S57_07280 PF09285 Elongation factor P, C-terminal B5S57_07285 PF02313 Fumarate reductase subunit D B5S57_07290 PF02300 Fumarate reductase subunit C B5S57_07295 PF13183 4Fe-4S dicluster domain B5S57_07295 PF13085 2Fe-2S iron-sulfur cluster binding domain B5S57_07300 PF02910 Fumarate reductase flavoprotein C-term B5S57_07300 PF00890 FAD binding domain B5S57_07305 PF00152 tRNA synthetases class II (D, K and N) B5S57_07310 PF00581 Rhodanese-like domain B5S57_07315 PF02556 Preprotein translocase subunit SecB B5S57_07320 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus B5S57_07320 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus B5S57_07325 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_07325 PF06426 Serine acetyltransferase, N-terminal B5S57_07345 PF02774 Semialdehyde dehydrogenase, dimerisation domain B5S57_07345 PF01118 Semialdehyde dehydrogenase, NAD binding domain B5S57_07350 PF00696 Amino acid kinase family B5S57_07355 PF00764 Arginosuccinate synthase B5S57_07360 PF00206 Lyase B5S57_07360 PF00583 Acetyltransferase (GNAT) family B5S57_07360 PF14698 Argininosuccinate lyase C-terminal B5S57_07370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B5S57_07370 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_07375 PF00462 Glutaredoxin B5S57_07375 PF08534 Redoxin B5S57_07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_07380 PF03466 LysR substrate binding domain B5S57_07385 PF17092 Penicillin-binding protein OB-like domain B5S57_07385 PF00912 Transglycosylase B5S57_07385 PF00905 Penicillin binding protein transpeptidase domain B5S57_07410 PF07660 Secretin and TonB N terminus short domain B5S57_07410 PF00263 Bacterial type II and III secretion system protein B5S57_07410 PF03958 Bacterial type II/III secretion system short domain B5S57_07410 PF11741 AMIN domain B5S57_07415 PF01202 Shikimate kinase B5S57_07430 PF02086 D12 class N6 adenine-specific DNA methyltransferase B5S57_07435 PF00834 Ribulose-phosphate 3 epimerase family B5S57_07440 PF13419 Haloacid dehalogenase-like hydrolase B5S57_07445 PF00579 tRNA synthetases class I (W and Y) B5S57_07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_07460 PF03466 LysR substrate binding domain B5S57_07470 PF01494 FAD binding domain B5S57_07480 PF00117 Glutamine amidotransferase class-I B5S57_07485 PF00202 Aminotransferase class-III B5S57_07490 PF04958 Arginine N-succinyltransferase beta subunit B5S57_07505 PF13545 Crp-like helix-turn-helix domain B5S57_07505 PF00027 Cyclic nucleotide-binding domain B5S57_07510 PF00485 Phosphoribulokinase / Uridine kinase family B5S57_07515 PF06794 Uncharacterised protein family (UPF0270) B5S57_07520 PF00561 alpha/beta hydrolase fold B5S57_07530 PF00005 ABC transporter B5S57_07530 PF12848 ABC transporter B5S57_07535 PF02525 Flavodoxin-like fold B5S57_07540 PF02254 TrkA-N domain B5S57_07540 PF00999 Sodium/hydrogen exchanger family B5S57_07545 PF09526 Probable metal-binding protein (DUF2387) B5S57_07550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B5S57_07555 PF01112 Asparaginase B5S57_07560 PF00709 Adenylosuccinate synthetase B5S57_07570 PF08238 Sel1 repeat B5S57_07575 PF17876 Cold shock domain B5S57_07575 PF08461 Ribonuclease R winged-helix domain B5S57_07575 PF08206 Ribonuclease B OB domain B5S57_07575 PF00773 RNB domain B5S57_07575 PF00575 S1 RNA binding domain B5S57_07580 PF08032 RNA 2'-O ribose methyltransferase substrate binding B5S57_07580 PF00588 SpoU rRNA Methylase family B5S57_07585 PF00338 Ribosomal protein S10p/S20e B5S57_07600 PF00276 Ribosomal protein L23 B5S57_07605 PF03947 Ribosomal Proteins L2, C-terminal domain B5S57_07605 PF00181 Ribosomal Proteins L2, RNA binding domain B5S57_07610 PF00203 Ribosomal protein S19 B5S57_07615 PF00237 Ribosomal protein L22p/L17e B5S57_07620 PF07650 KH domain B5S57_07620 PF00189 Ribosomal protein S3, C-terminal domain B5S57_07625 PF00252 Ribosomal protein L16p/L10e B5S57_07630 PF00831 Ribosomal L29 protein B5S57_07635 PF00366 Ribosomal protein S17 B5S57_07640 PF00238 Ribosomal protein L14p/L23e B5S57_07650 PF00281 Ribosomal protein L5 B5S57_07650 PF00673 ribosomal L5P family C-terminus B5S57_07655 PF00253 Ribosomal protein S14p/S29e B5S57_07660 PF00410 Ribosomal protein S8 B5S57_07665 PF00347 Ribosomal protein L6 B5S57_07670 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast B5S57_07680 PF00327 Ribosomal protein L30p/L7e B5S57_07685 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A B5S57_07690 PF00344 SecY translocase B5S57_07695 PF00444 Ribosomal protein L36 B5S57_07700 PF00416 Ribosomal protein S13/S18 B5S57_07705 PF00411 Ribosomal protein S11 B5S57_07710 PF00163 Ribosomal protein S4/S9 N-terminal domain B5S57_07710 PF01479 S4 domain B5S57_07720 PF01196 Ribosomal protein L17 B5S57_07725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B5S57_07725 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B5S57_07730 PF04225 Opacity-associated protein A LysM-like domain B5S57_07730 PF08525 Opacity-associated protein A N-terminal motif B5S57_07735 PF13673 Acetyltransferase (GNAT) domain B5S57_07740 PF00271 Helicase conserved C-terminal domain B5S57_07740 PF03880 DbpA RNA binding domain B5S57_07740 PF00270 DEAD/DEAH box helicase B5S57_07780 PF00149 Calcineurin-like phosphoesterase B5S57_07780 PF02872 5'-nucleotidase, C-terminal domain B5S57_07785 PF10414 Sirohaem synthase dimerisation region B5S57_07785 PF14824 Sirohaem biosynthesis protein central B5S57_07785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B5S57_07790 PF01507 Phosphoadenosine phosphosulfate reductase family B5S57_07795 PF00009 Elongation factor Tu GTP binding domain B5S57_07820 PF00005 ABC transporter B5S57_07835 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) B5S57_07840 PF01625 Peptide methionine sulfoxide reductase B5S57_07845 PF07244 Surface antigen variable number repeat B5S57_07845 PF17243 POTRA domain TamA domain 1 B5S57_07845 PF01103 Surface antigen B5S57_07850 PF04357 TamB, inner membrane protein subunit of TAM complex B5S57_07855 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like B5S57_07865 PF00719 Inorganic pyrophosphatase B5S57_07870 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain B5S57_07875 PF08245 Mur ligase middle domain B5S57_07875 PF01225 Mur ligase family, catalytic domain B5S57_07875 PF02875 Mur ligase family, glutamate ligase domain B5S57_07880 PF02441 Flavoprotein B5S57_07890 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_07895 PF00005 ABC transporter B5S57_07900 PF04751 Protein of unknown function (DUF615) B5S57_07905 PF01523 Putative modulator of DNA gyrase B5S57_07910 PF00571 CBS domain B5S57_07910 PF01769 Divalent cation transporter B5S57_07910 PF03448 MgtE intracellular N domain B5S57_07915 PF00381 PTS HPr component phosphorylation site B5S57_07920 PF03668 P-loop ATPase protein family B5S57_07925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B5S57_07930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B5S57_07935 PF04963 Sigma-54 factor, core binding domain B5S57_07935 PF00309 Sigma-54 factor, Activator interacting domain (AID) B5S57_07935 PF04552 Sigma-54, DNA binding domain B5S57_07940 PF00005 ABC transporter B5S57_07940 PF12399 Branched-chain amino acid ATP-binding cassette transporter B5S57_07945 PF03968 OstA-like protein B5S57_07960 PF01380 SIS domain B5S57_07960 PF00571 CBS domain B5S57_07965 PF01699 Sodium/calcium exchanger protein B5S57_07970 PF00005 ABC transporter B5S57_07975 PF02405 Permease MlaE B5S57_07980 PF02470 MlaD protein B5S57_07985 PF05494 MlaC protein B5S57_07995 PF01722 BolA-like protein B5S57_08000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B5S57_08005 PF01553 Acyltransferase B5S57_08010 PF08448 PAS fold B5S57_08010 PF00512 His Kinase A (phospho-acceptor) domain B5S57_08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_08010 PF13188 PAS domain B5S57_08010 PF00072 Response regulator receiver domain B5S57_08020 PF01042 Endoribonuclease L-PSP B5S57_08025 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain B5S57_08025 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain B5S57_08030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B5S57_08030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B5S57_08035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B5S57_08035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B5S57_08040 PF13638 PIN domain B5S57_08040 PF02562 PhoH-like protein B5S57_08050 PF18339 RapA N-terminal Tudor like domain 1 B5S57_08050 PF18337 RapA N-terminal Tudor like domain B5S57_08050 PF00176 SNF2 family N-terminal domain B5S57_08050 PF12137 RNA polymerase recycling family C-terminal B5S57_08050 PF00271 Helicase conserved C-terminal domain B5S57_08060 PF00849 RNA pseudouridylate synthase B5S57_08065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B5S57_08065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B5S57_08070 PF10458 Valyl tRNA synthetase tRNA binding arm B5S57_08070 PF00133 tRNA synthetases class I (I, L, M and V) B5S57_08070 PF08264 Anticodon-binding domain of tRNA B5S57_08075 PF04364 DNA polymerase III chi subunit, HolC B5S57_08080 PF00883 Cytosol aminopeptidase family, catalytic domain B5S57_08080 PF02789 Cytosol aminopeptidase family, N-terminal domain B5S57_08085 PF03739 Lipopolysaccharide export system permease LptF/LptG B5S57_08090 PF03739 Lipopolysaccharide export system permease LptF/LptG B5S57_08150 PF00694 Aconitase C-terminal domain B5S57_08155 PF00330 Aconitase family (aconitate hydratase) B5S57_08160 PF00180 Isocitrate/isopropylmalate dehydrogenase B5S57_08165 PF00682 HMGL-like B5S57_08165 PF08502 LeuA allosteric (dimerisation) domain B5S57_08170 PF01569 PAP2 superfamily B5S57_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_08180 PF03466 LysR substrate binding domain B5S57_08185 PF00501 AMP-binding enzyme B5S57_08190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B5S57_08190 PF00205 Thiamine pyrophosphate enzyme, central domain B5S57_08190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B5S57_08195 PF10369 Small subunit of acetolactate synthase B5S57_08200 PF01842 ACT domain B5S57_08200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B5S57_08200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B5S57_08205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) B5S57_08210 PF01812 5-formyltetrahydrofolate cyclo-ligase family B5S57_08220 PF05164 Cell division protein ZapA B5S57_08230 PF01494 FAD binding domain B5S57_08235 PF01494 FAD binding domain B5S57_08255 PF03937 Flavinator of succinate dehydrogenase B5S57_08265 PF02910 Fumarate reductase flavoprotein C-term B5S57_08265 PF00890 FAD binding domain B5S57_08270 PF04542 Sigma-70 region 2 B5S57_08270 PF08281 Sigma-70, region 4 B5S57_08275 PF03873 Anti sigma-E protein RseA, C-terminal domain B5S57_08275 PF03872 Anti sigma-E protein RseA, N-terminal domain B5S57_08280 PF03888 MucB/RseB N-terminal domain B5S57_08280 PF17188 MucB/RseB C-terminal domain B5S57_08290 PF00009 Elongation factor Tu GTP binding domain B5S57_08290 PF00679 Elongation factor G C-terminus B5S57_08290 PF03144 Elongation factor Tu domain 2 B5S57_08290 PF06421 GTP-binding protein LepA C-terminus B5S57_08295 PF10502 Signal peptidase, peptidase S26 B5S57_08305 PF01926 50S ribosome-binding GTPase B5S57_08305 PF07650 KH domain B5S57_08315 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ B5S57_08320 PF01648 4'-phosphopantetheinyl transferase superfamily B5S57_08325 PF01627 Hpt domain B5S57_08325 PF00512 His Kinase A (phospho-acceptor) domain B5S57_08325 PF00072 Response regulator receiver domain B5S57_08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_08325 PF00672 HAMP domain B5S57_08325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) B5S57_08330 PF05958 tRNA (Uracil-5-)-methyltransferase B5S57_08330 PF01938 TRAM domain B5S57_08335 PF02824 TGS domain B5S57_08335 PF13291 ACT domain B5S57_08335 PF04607 Region found in RelA / SpoT proteins B5S57_08340 PF03819 MazG nucleotide pyrophosphohydrolase domain B5S57_08345 PF00117 Glutamine amidotransferase class-I B5S57_08345 PF06418 CTP synthase N-terminus B5S57_08350 PF00113 Enolase, C-terminal TIM barrel domain B5S57_08350 PF03952 Enolase, N-terminal domain B5S57_08355 PF01743 Poly A polymerase head domain B5S57_08355 PF01966 HD domain B5S57_08355 PF12627 Probable RNA and SrmB- binding site of polymerase A B5S57_08360 PF13401 AAA domain B5S57_08360 PF01471 Putative peptidoglycan binding domain B5S57_08370 PF08239 Bacterial SH3 domain B5S57_08375 PF01384 Phosphate transporter family B5S57_08380 PF01865 Protein of unknown function DUF47 B5S57_08385 PF01928 CYTH domain B5S57_08395 PF00672 HAMP domain B5S57_08395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_08400 PF08335 GlnD PII-uridylyltransferase B5S57_08400 PF03710 Glutamate-ammonia ligase adenylyltransferase B5S57_08405 PF01467 Cytidylyltransferase-like B5S57_08405 PF00294 pfkB family carbohydrate kinase B5S57_08410 PF02321 Outer membrane efflux protein B5S57_08415 PF00293 NUDIX domain B5S57_08420 PF06853 Protein of unknown function (DUF1249) B5S57_08425 PF00149 Calcineurin-like phosphoesterase B5S57_08430 PF05728 Uncharacterised protein family (UPF0227) B5S57_08435 PF00986 DNA gyrase B subunit, carboxyl terminus B5S57_08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_08435 PF00204 DNA gyrase B B5S57_08435 PF01751 Toprim domain B5S57_08440 PF00521 DNA gyrase/topoisomerase IV, subunit A B5S57_08440 PF03989 DNA gyrase C-terminal domain, beta-propeller B5S57_08445 PF13180 PDZ domain B5S57_08450 PF00595 PDZ domain B5S57_08455 PF06295 Protein of unknown function (DUF1043) B5S57_08460 PF03969 AFG1-like ATPase B5S57_08470 PF00572 Ribosomal protein L13 B5S57_08475 PF00380 Ribosomal protein S9/S16 B5S57_08480 PF00355 Rieske [2Fe-2S] domain B5S57_08480 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal B5S57_08485 PF00032 Cytochrome b(C-terminal)/b6/petD B5S57_08485 PF00033 Cytochrome b/b6/petB B5S57_08490 PF02167 Cytochrome C1 family B5S57_08495 PF02798 Glutathione S-transferase, N-terminal domain B5S57_08495 PF00043 Glutathione S-transferase, C-terminal domain B5S57_08500 PF04386 Stringent starvation protein B B5S57_08505 PF04972 BON domain B5S57_08510 PF13580 SIS domain B5S57_08515 PF02021 Uncharacterised protein family UPF0102 B5S57_08520 PF04348 LppC putative lipoprotein B5S57_08525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B5S57_08535 PF01795 MraW methylase family B5S57_08540 PF04999 Cell division protein FtsL B5S57_08545 PF00905 Penicillin binding protein transpeptidase domain B5S57_08545 PF03717 Penicillin-binding Protein dimerisation domain B5S57_08550 PF08245 Mur ligase middle domain B5S57_08550 PF01225 Mur ligase family, catalytic domain B5S57_08550 PF02875 Mur ligase family, glutamate ligase domain B5S57_08555 PF08245 Mur ligase middle domain B5S57_08555 PF02875 Mur ligase family, glutamate ligase domain B5S57_08555 PF01225 Mur ligase family, catalytic domain B5S57_08560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 B5S57_08560 PF00953 Glycosyl transferase family 4 B5S57_08565 PF02875 Mur ligase family, glutamate ligase domain B5S57_08565 PF08245 Mur ligase middle domain B5S57_08570 PF01098 Cell cycle protein B5S57_08575 PF04101 Glycosyltransferase family 28 C-terminal domain B5S57_08575 PF03033 Glycosyltransferase family 28 N-terminal domain B5S57_08580 PF01225 Mur ligase family, catalytic domain B5S57_08580 PF02875 Mur ligase family, glutamate ligase domain B5S57_08580 PF08245 Mur ligase middle domain B5S57_08585 PF03799 Cell division protein FtsQ B5S57_08585 PF08478 POTRA domain, FtsQ-type B5S57_08590 PF02491 SHS2 domain inserted in FTSA B5S57_08595 PF12327 FtsZ family, C-terminal domain B5S57_08595 PF00091 Tubulin/FtsZ family, GTPase domain B5S57_08600 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase B5S57_08610 PF01043 SecA preprotein cross-linking domain B5S57_08610 PF02810 SEC-C motif B5S57_08610 PF07516 SecA Wing and Scaffold domain B5S57_08610 PF07517 SecA DEAD-like domain B5S57_08615 PF00293 NUDIX domain B5S57_08625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B5S57_08625 PF00117 Glutamine amidotransferase class-I B5S57_08630 PF02142 MGS-like domain B5S57_08630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B5S57_08630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B5S57_08635 PF01925 Sulfite exporter TauE/SafE B5S57_08640 PF03466 LysR substrate binding domain B5S57_08640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_08645 PF03458 UPF0126 domain B5S57_08650 PF01497 Periplasmic binding protein B5S57_08675 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_08675 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster B5S57_08680 PF00310 Glutamine amidotransferases class-II B5S57_08680 PF01645 Conserved region in glutamate synthase B5S57_08680 PF01493 GXGXG motif B5S57_08680 PF04898 Glutamate synthase central domain B5S57_08685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster B5S57_08685 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_08690 PF01645 Conserved region in glutamate synthase B5S57_08690 PF04898 Glutamate synthase central domain B5S57_08690 PF00310 Glutamine amidotransferases class-II B5S57_08690 PF01493 GXGXG motif B5S57_08695 PF16199 Radical_SAM C-terminal domain B5S57_08695 PF04055 Radical SAM superfamily B5S57_08700 PF00512 His Kinase A (phospho-acceptor) domain B5S57_08700 PF18415 Histidine kinase receptor ArcB trans-membrane domain B5S57_08700 PF01627 Hpt domain B5S57_08700 PF00072 Response regulator receiver domain B5S57_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_08700 PF00989 PAS fold B5S57_08710 PF00072 Response regulator receiver domain B5S57_08710 PF00486 Transcriptional regulatory protein, C terminal B5S57_08715 PF03737 Aldolase/RraA B5S57_08725 PF03447 Homoserine dehydrogenase, NAD binding domain B5S57_08725 PF00742 Homoserine dehydrogenase B5S57_08725 PF13840 ACT domain B5S57_08725 PF01842 ACT domain B5S57_08725 PF00696 Amino acid kinase family B5S57_08730 PF00288 GHMP kinases N terminal domain B5S57_08730 PF08544 GHMP kinases C terminal B5S57_08735 PF00291 Pyridoxal-phosphate dependent enzyme B5S57_08735 PF14821 Threonine synthase N terminus B5S57_08740 PF01228 Glycine radical B5S57_08745 PF01261 Xylose isomerase-like TIM barrel B5S57_08750 PF03167 Uracil DNA glycosylase superfamily B5S57_08765 PF01235 Sodium:alanine symporter family B5S57_08775 PF01026 TatD related DNase B5S57_08780 PF01773 Na+ dependent nucleoside transporter N-terminus B5S57_08780 PF07662 Na+ dependent nucleoside transporter C-terminus B5S57_08780 PF07670 Nucleoside recognition B5S57_08785 PF01791 DeoC/LacD family aldolase B5S57_08790 PF02885 Glycosyl transferase family, helical bundle domain B5S57_08790 PF00591 Glycosyl transferase family, a/b domain B5S57_08790 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain B5S57_08795 PF01676 Metalloenzyme superfamily B5S57_08800 PF01048 Phosphorylase superfamily B5S57_08810 PF18429 Domain of unknown function (DUF5609) B5S57_08820 PF18073 Rubredoxin metal binding domain B5S57_08825 PF03764 Elongation factor G, domain IV B5S57_08825 PF14492 Elongation Factor G, domain II B5S57_08825 PF00679 Elongation factor G C-terminus B5S57_08825 PF00009 Elongation factor Tu GTP binding domain B5S57_08825 PF03144 Elongation factor Tu domain 2 B5S57_08830 PF09905 DNA-binding protein VF530 B5S57_08835 PF00501 AMP-binding enzyme B5S57_08840 PF11849 Domain of unknown function (DUF3369) B5S57_08855 PF16363 GDP-mannose 4,6 dehydratase B5S57_08860 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain B5S57_08860 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain B5S57_08865 PF00288 GHMP kinases N terminal domain B5S57_08865 PF08544 GHMP kinases C terminal B5S57_08865 PF10509 Galactokinase galactose-binding signature B5S57_08870 PF00356 Bacterial regulatory proteins, lacI family B5S57_08880 PF01544 CorA-like Mg2+ transporter protein B5S57_08890 PF00583 Acetyltransferase (GNAT) family B5S57_08900 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle B5S57_08900 PF14602 Hexapeptide repeat of succinyl-transferase B5S57_08905 PF07130 YebG protein B5S57_08920 PF17946 RecC C-terminal domain B5S57_08925 PF12705 PD-(D/E)XK nuclease superfamily B5S57_08925 PF00580 UvrD/REP helicase N-terminal domain B5S57_08925 PF13361 UvrD-like helicase C-terminal domain B5S57_08930 PF13538 UvrD-like helicase C-terminal domain B5S57_08940 PF00696 Amino acid kinase family B5S57_08940 PF00583 Acetyltransferase (GNAT) family B5S57_08950 PF03562 MltA specific insert domain B5S57_08950 PF06725 3D domain B5S57_08955 PF00899 ThiF family B5S57_08960 PF02657 Fe-S metabolism associated domain B5S57_08965 PF00266 Aminotransferase class-V B5S57_08970 PF01965 DJ-1/PfpI family B5S57_08975 PF08546 Ketopantoate reductase PanE/ApbA C terminal B5S57_08975 PF02558 Ketopantoate reductase PanE/ApbA B5S57_08980 PF03502 Nucleoside-specific channel-forming protein, Tsx B5S57_08990 PF04545 Sigma-70, region 4 B5S57_08990 PF04542 Sigma-70 region 2 B5S57_09000 PF07690 Major Facilitator Superfamily B5S57_09005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B5S57_09015 PF05175 Methyltransferase small domain B5S57_09020 PF01722 BolA-like protein B5S57_09025 PF11973 NQRA C-terminal domain B5S57_09025 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) B5S57_09030 PF03116 NQR2, RnfD, RnfE family B5S57_09035 PF04205 FMN-binding domain B5S57_09040 PF02508 Rnf-Nqr subunit, membrane protein B5S57_09045 PF02508 Rnf-Nqr subunit, membrane protein B5S57_09050 PF00970 Oxidoreductase FAD-binding domain B5S57_09050 PF00175 Oxidoreductase NAD-binding domain B5S57_09050 PF00111 2Fe-2S iron-sulfur cluster binding domain B5S57_09055 PF02424 ApbE family B5S57_09065 PF11799 impB/mucB/samB family C-terminal domain B5S57_09065 PF11798 IMS family HHH motif B5S57_09065 PF00817 impB/mucB/samB family B5S57_09080 PF00209 Sodium:neurotransmitter symporter family B5S57_09090 PF18030 RimK PreATP-grasp domain B5S57_09090 PF08443 RimK-like ATP-grasp domain B5S57_09095 PF18030 RimK PreATP-grasp domain B5S57_09095 PF08443 RimK-like ATP-grasp domain B5S57_09100 PF01546 Peptidase family M20/M25/M40 B5S57_09100 PF07687 Peptidase dimerisation domain B5S57_09105 PF00860 Permease family B5S57_09120 PF07417 Sigma factor-binding transcriptional regulator Crl B5S57_09125 PF01472 PUA domain B5S57_09125 PF00696 Amino acid kinase family B5S57_09130 PF00171 Aldehyde dehydrogenase family B5S57_09135 PF03477 ATP cone domain B5S57_09140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B5S57_09140 PF01872 RibD C-terminal domain B5S57_09145 PF00677 Lumazine binding domain B5S57_09150 PF00925 GTP cyclohydrolase II B5S57_09150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B5S57_09155 PF00885 6,7-dimethyl-8-ribityllumazine synthase B5S57_09165 PF02769 AIR synthase related protein, C-terminal domain B5S57_09165 PF00586 AIR synthase related protein, N-terminal domain B5S57_09170 PF04608 Phosphatidylglycerophosphatase A B5S57_09175 PF11944 Protein of unknown function (DUF3461) B5S57_09185 PF00557 Metallopeptidase family M24 B5S57_09190 PF00318 Ribosomal protein S2 B5S57_09195 PF00889 Elongation factor TS B5S57_09200 PF00696 Amino acid kinase family B5S57_09205 PF01765 Ribosome recycling factor B5S57_09210 PF01255 Putative undecaprenyl diphosphate synthase B5S57_09220 PF13288 DXP reductoisomerase C-terminal domain B5S57_09220 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain B5S57_09220 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase B5S57_09225 PF17820 PDZ domain B5S57_09225 PF02163 Peptidase family M50 B5S57_09230 PF07244 Surface antigen variable number repeat B5S57_09230 PF01103 Surface antigen B5S57_09235 PF03938 Outer membrane protein (OmpH-like) B5S57_09240 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_09240 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B5S57_09245 PF07977 FabA-like domain B5S57_09250 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_09250 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 B5S57_09255 PF02684 Lipid-A-disaccharide synthetase B5S57_09260 PF01351 Ribonuclease HII B5S57_09265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B5S57_09265 PF02811 PHP domain B5S57_09265 PF01336 OB-fold nucleic acid binding domain B5S57_09265 PF14579 Helix-hairpin-helix motif B5S57_09265 PF07733 Bacterial DNA polymerase III alpha NTPase domain B5S57_09270 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit B5S57_09275 PF11734 TilS substrate C-terminal domain B5S57_09275 PF09179 TilS substrate binding domain B5S57_09275 PF01171 PP-loop family B5S57_09280 PF00034 Cytochrome c B5S57_09285 PF00543 Nitrogen regulatory protein P-II B5S57_09290 PF03372 Endonuclease/Exonuclease/phosphatase family B5S57_09300 PF01464 Transglycosylase SLT domain B5S57_09300 PF01476 LysM domain B5S57_09305 PF16123 Hydroxyacylglutathione hydrolase C-terminus B5S57_09305 PF00753 Metallo-beta-lactamase superfamily B5S57_09310 PF08241 Methyltransferase domain B5S57_09315 PF00075 RNase H B5S57_09320 PF00929 Exonuclease B5S57_09330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B5S57_09330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B5S57_09330 PF09317 Domain of unknown function (DUF1974) B5S57_09330 PF02770 Acyl-CoA dehydrogenase, middle domain B5S57_09335 PF13580 SIS domain B5S57_09340 PF13230 Glutamine amidotransferases class-II B5S57_09345 PF00551 Formyl transferase B5S57_09350 PF00586 AIR synthase related protein, N-terminal domain B5S57_09350 PF02769 AIR synthase related protein, C-terminal domain B5S57_09360 PF00849 RNA pseudouridylate synthase B5S57_09360 PF01479 S4 domain B5S57_09375 PF00728 Glycosyl hydrolase family 20, catalytic domain B5S57_09375 PF02838 Glycosyl hydrolase family 20, domain 2 B5S57_09375 PF03173 Putative carbohydrate binding domain B5S57_09375 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain B5S57_09385 PF00403 Heavy-metal-associated domain B5S57_09390 PF00749 tRNA synthetases class I (E and Q), catalytic domain B5S57_09395 PF01389 OmpA-like transmembrane domain B5S57_09395 PF00691 OmpA family B5S57_09430 PF04316 Anti-sigma-28 factor, FlgM B5S57_09440 PF01584 CheW-like domain B5S57_09440 PF00072 Response regulator receiver domain B5S57_09445 PF01739 CheR methyltransferase, SAM binding domain B5S57_09445 PF03705 CheR methyltransferase, all-alpha domain B5S57_09450 PF00460 Flagella basal body rod protein B5S57_09455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B5S57_09455 PF00460 Flagella basal body rod protein B5S57_09460 PF03963 Flagellar hook capping protein - N-terminal region B5S57_09460 PF13861 FlgD Tudor-like domain B5S57_09460 PF13860 FlgD Ig-like domain B5S57_09465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B5S57_09465 PF00460 Flagella basal body rod protein B5S57_09465 PF07559 Flagellar basal body protein FlaE B5S57_09470 PF00460 Flagella basal body rod protein B5S57_09470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B5S57_09475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B5S57_09475 PF00460 Flagella basal body rod protein B5S57_09480 PF02107 Flagellar L-ring protein B5S57_09485 PF02119 Flagellar P-ring protein B5S57_09490 PF10135 Rod binding protein B5S57_09490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase B5S57_09495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B5S57_09495 PF07196 Flagellin hook IN motif B5S57_09500 PF00669 Bacterial flagellin N-terminal helical region B5S57_09510 PF07196 Flagellin hook IN motif B5S57_09510 PF00669 Bacterial flagellin N-terminal helical region B5S57_09510 PF00700 Bacterial flagellin C-terminal helical region B5S57_09515 PF00700 Bacterial flagellin C-terminal helical region B5S57_09515 PF00669 Bacterial flagellin N-terminal helical region B5S57_09515 PF07196 Flagellin hook IN motif B5S57_09590 PF06071 Protein of unknown function (DUF933) B5S57_09590 PF01926 50S ribosome-binding GTPase B5S57_09595 PF01195 Peptidyl-tRNA hydrolase B5S57_09600 PF14572 Phosphoribosyl synthetase-associated domain B5S57_09600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B5S57_09605 PF00288 GHMP kinases N terminal domain B5S57_09605 PF08544 GHMP kinases C terminal B5S57_09610 PF03550 Outer membrane lipoprotein LolB B5S57_09615 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain B5S57_09615 PF01488 Shikimate / quinate 5-dehydrogenase B5S57_09615 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain B5S57_09620 PF03462 PCRF domain B5S57_09620 PF00472 RF-1 domain B5S57_09625 PF13847 Methyltransferase domain B5S57_09625 PF17827 PrmC N-terminal domain B5S57_09630 PF04247 Invasion gene expression up-regulator, SirB B5S57_09635 PF13369 Transglutaminase-like superfamily B5S57_09640 PF00793 DAHP synthetase I family B5S57_09645 PF02872 5'-nucleotidase, C-terminal domain B5S57_09645 PF00149 Calcineurin-like phosphoesterase B5S57_09650 PF04073 Aminoacyl-tRNA editing domain B5S57_09655 PF00860 Permease family B5S57_09670 PF03358 NADPH-dependent FMN reductase B5S57_09675 PF03960 ArsC family B5S57_09680 PF01435 Peptidase family M48 B5S57_09680 PF13181 Tetratricopeptide repeat B5S57_09690 PF01594 AI-2E family transporter B5S57_09695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_09695 PF00672 HAMP domain B5S57_09695 PF02743 Cache domain B5S57_09700 PF00578 AhpC/TSA family B5S57_09730 PF13361 UvrD-like helicase C-terminal domain B5S57_09730 PF00580 UvrD/REP helicase N-terminal domain B5S57_09775 PF00578 AhpC/TSA family B5S57_09800 PF00578 AhpC/TSA family B5S57_09810 PF00701 Dihydrodipicolinate synthetase family B5S57_09830 PF01546 Peptidase family M20/M25/M40 B5S57_09830 PF07687 Peptidase dimerisation domain B5S57_09835 PF03960 ArsC family B5S57_09855 PF11143 Protein of unknown function (DUF2919) B5S57_09860 PF04261 Dyp-type peroxidase family B5S57_09865 PF00669 Bacterial flagellin N-terminal helical region B5S57_09865 PF07196 Flagellin hook IN motif B5S57_09865 PF00700 Bacterial flagellin C-terminal helical region B5S57_09870 PF00669 Bacterial flagellin N-terminal helical region B5S57_09870 PF07196 Flagellin hook IN motif B5S57_09870 PF00700 Bacterial flagellin C-terminal helical region B5S57_09875 PF00700 Bacterial flagellin C-terminal helical region B5S57_09875 PF07196 Flagellin hook IN motif B5S57_09875 PF00669 Bacterial flagellin N-terminal helical region B5S57_09880 PF03646 FlaG protein B5S57_09885 PF07195 Flagellar hook-associated protein 2 C-terminus B5S57_09885 PF07196 Flagellin hook IN motif B5S57_09885 PF02465 Flagellar hook-associated protein 2 N-terminus B5S57_09895 PF02561 Flagellar protein FliS B5S57_09900 PF00158 Sigma-54 interaction domain B5S57_09900 PF00072 Response regulator receiver domain B5S57_09900 PF02954 Bacterial regulatory protein, Fis family B5S57_09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_09905 PF00512 His Kinase A (phospho-acceptor) domain B5S57_09910 PF02954 Bacterial regulatory protein, Fis family B5S57_09910 PF00072 Response regulator receiver domain B5S57_09910 PF00158 Sigma-54 interaction domain B5S57_09915 PF02049 Flagellar hook-basal body complex protein FliE B5S57_09920 PF01514 Secretory protein of YscJ/FliF family B5S57_09920 PF08345 Flagellar M-ring protein C-terminal B5S57_09925 PF14842 FliG N-terminal domain B5S57_09925 PF14841 FliG middle domain B5S57_09925 PF01706 FliG C-terminal domain B5S57_09935 PF18269 T3SS EscN ATPase C-terminal domain B5S57_09935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B5S57_09955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term B5S57_09955 PF02154 Flagellar motor switch protein FliM B5S57_09960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term B5S57_09965 PF04347 Flagellar biosynthesis protein, FliO B5S57_09970 PF00813 FliP family B5S57_09975 PF01313 Bacterial export proteins, family 3 B5S57_09980 PF01311 Bacterial export proteins, family 1 B5S57_09985 PF01312 FlhB HrpN YscU SpaS Family B5S57_09990 PF01713 Smr domain B5S57_09995 PF05175 Methyltransferase small domain B5S57_10000 PF01264 Chorismate synthase B5S57_10005 PF03458 UPF0126 domain B5S57_10010 PF04315 Elongation factor P hydroxylase B5S57_10015 PF08891 YfcL protein B5S57_10020 PF03358 NADPH-dependent FMN reductase B5S57_10025 PF05430 S-adenosyl-L-methionine-dependent methyltransferase B5S57_10025 PF01266 FAD dependent oxidoreductase B5S57_10030 PF00109 Beta-ketoacyl synthase, N-terminal domain B5S57_10030 PF02801 Beta-ketoacyl synthase, C-terminal domain B5S57_10035 PF11890 Domain of unknown function (DUF3410) B5S57_10035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B5S57_10035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B5S57_10040 PF02774 Semialdehyde dehydrogenase, dimerisation domain B5S57_10040 PF01118 Semialdehyde dehydrogenase, NAD binding domain B5S57_10045 PF01475 Ferric uptake regulator family B5S57_10055 PF03466 LysR substrate binding domain B5S57_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_10060 PF03788 LrgA family B5S57_10065 PF04172 LrgB-like family B5S57_10070 PF00258 Flavodoxin B5S57_10080 PF12697 Alpha/beta hydrolase family B5S57_10085 PF17206 SeqA protein N-terminal domain B5S57_10085 PF03925 SeqA protein C-terminal domain B5S57_10090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B5S57_10090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B5S57_10090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B5S57_10090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B5S57_10100 PF01784 NIF3 (NGG1p interacting factor 3) B5S57_10105 PF00285 Citrate synthase, C-terminal domain B5S57_10110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B5S57_10115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B5S57_10120 PF02910 Fumarate reductase flavoprotein C-term B5S57_10120 PF00890 FAD binding domain B5S57_10125 PF13085 2Fe-2S iron-sulfur cluster binding domain B5S57_10130 PF02779 Transketolase, pyrimidine binding domain B5S57_10130 PF16078 2-oxoglutarate dehydrogenase N-terminus B5S57_10130 PF00676 Dehydrogenase E1 component B5S57_10130 PF16870 2-oxoglutarate dehydrogenase C-terminal B5S57_10135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B5S57_10135 PF00364 Biotin-requiring enzyme B5S57_10135 PF02817 e3 binding domain B5S57_10140 PF08442 ATP-grasp domain B5S57_10140 PF00549 CoA-ligase B5S57_10145 PF00549 CoA-ligase B5S57_10145 PF02629 CoA binding domain B5S57_10150 PF00950 ABC 3 transport family B5S57_10155 PF00005 ABC transporter B5S57_10160 PF01297 Zinc-uptake complex component A periplasmic B5S57_10165 PF02311 AraC-like ligand binding domain B5S57_10165 PF12833 Helix-turn-helix domain B5S57_10170 PF04023 FeoA domain B5S57_10175 PF02421 Ferrous iron transport protein B B5S57_10175 PF07670 Nucleoside recognition B5S57_10175 PF07664 Ferrous iron transport protein B C terminus B5S57_10190 PF03485 Arginyl tRNA synthetase N terminal domain B5S57_10190 PF05746 DALR anticodon binding domain B5S57_10190 PF00750 tRNA synthetases class I (R) B5S57_10195 PF06185 YecM protein B5S57_10200 PF05193 Peptidase M16 inactive domain B5S57_10200 PF00675 Insulinase (Peptidase family M16) B5S57_10205 PF00300 Histidine phosphatase superfamily (branch 1) B5S57_10210 PF00771 FHIPEP family B5S57_10215 PF00448 SRP54-type protein, GTPase domain B5S57_10220 PF10609 NUBPL iron-transfer P-loop NTPase B5S57_10225 PF04545 Sigma-70, region 4 B5S57_10225 PF04542 Sigma-70 region 2 B5S57_10225 PF04539 Sigma-70 region 3 B5S57_10230 PF00072 Response regulator receiver domain B5S57_10235 PF04344 Chemotaxis phosphatase, CheZ B5S57_10240 PF07194 P2 response regulator binding domain B5S57_10240 PF01627 Hpt domain B5S57_10240 PF01584 CheW-like domain B5S57_10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_10240 PF02895 Signal transducing histidine kinase, homodimeric domain B5S57_10245 PF01339 CheB methylesterase B5S57_10245 PF00072 Response regulator receiver domain B5S57_10250 PF13614 AAA domain B5S57_10260 PF01584 CheW-like domain B5S57_10270 PF00005 ABC transporter B5S57_10275 PF03379 CcmB protein B5S57_10280 PF01578 Cytochrome C assembly protein B5S57_10290 PF03100 CcmE B5S57_10295 PF01578 Cytochrome C assembly protein B5S57_10295 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal B5S57_10300 PF08534 Redoxin B5S57_10305 PF03918 Cytochrome C biogenesis protein B5S57_10315 PF04333 MlaA lipoprotein B5S57_10330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B5S57_10330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B5S57_10335 PF00462 Glutaredoxin B5S57_10340 PF01751 Toprim domain B5S57_10340 PF01131 DNA topoisomerase B5S57_10355 PF02634 FdhD/NarQ family B5S57_10360 PF00384 Molybdopterin oxidoreductase B5S57_10370 PF00884 Sulfatase B5S57_10370 PF11893 Domain of unknown function (DUF3413) B5S57_10375 PF07208 Protein of unknown function (DUF1414) B5S57_10380 PF04245 37-kD nucleoid-associated bacterial protein B5S57_10390 PF03553 Na+/H+ antiporter family B5S57_10395 PF01118 Semialdehyde dehydrogenase, NAD binding domain B5S57_10395 PF02774 Semialdehyde dehydrogenase, dimerisation domain B5S57_10400 PF01914 MarC family integral membrane protein B5S57_10405 PF00465 Iron-containing alcohol dehydrogenase B5S57_10405 PF00171 Aldehyde dehydrogenase family B5S57_10415 PF00575 S1 RNA binding domain B5S57_10415 PF10150 Ribonuclease E/G family B5S57_10415 PF12111 Polyribonucleotide phosphorylase C terminal B5S57_10420 PF01479 S4 domain B5S57_10420 PF00849 RNA pseudouridylate synthase B5S57_10425 PF02545 Maf-like protein B5S57_10430 PF02620 Large ribosomal RNA subunit accumulation protein YceD B5S57_10435 PF01783 Ribosomal L32p protein family B5S57_10440 PF02504 Fatty acid synthesis protein B5S57_10445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B5S57_10445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B5S57_10450 PF00698 Acyl transferase domain B5S57_10460 PF00550 Phosphopantetheine attachment site B5S57_10465 PF02801 Beta-ketoacyl synthase, C-terminal domain B5S57_10465 PF00109 Beta-ketoacyl synthase, N-terminal domain B5S57_10470 PF01063 Amino-transferase class IV B5S57_10475 PF02618 YceG-like family B5S57_10480 PF02223 Thymidylate kinase B5S57_10485 PF09115 DNA polymerase III, delta subunit, C terminal B5S57_10490 PF01026 TatD related DNase B5S57_10495 PF00367 phosphotransferase system, EIIB B5S57_10495 PF02378 Phosphotransferase system, EIIC B5S57_10500 PF00209 Sodium:neurotransmitter symporter family B5S57_10510 PF01734 Patatin-like phospholipase B5S57_10515 PF00224 Pyruvate kinase, barrel domain B5S57_10515 PF02887 Pyruvate kinase, alpha/beta domain B5S57_10520 PF00480 ROK family B5S57_10525 PF00072 Response regulator receiver domain B5S57_10525 PF01584 CheW-like domain B5S57_10530 PF00106 short chain dehydrogenase B5S57_10535 PF08496 Peptidase family S49 N-terminal B5S57_10535 PF01343 Peptidase family S49 B5S57_10550 PF01966 HD domain B5S57_10550 PF13286 Phosphohydrolase-associated domain B5S57_10560 PF00155 Aminotransferase class I and II B5S57_10570 PF00425 chorismate binding enzyme B5S57_10575 PF16582 Middle domain of thiamine pyrophosphate B5S57_10575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B5S57_10575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B5S57_10580 PF12697 Alpha/beta hydrolase family B5S57_10585 PF00378 Enoyl-CoA hydratase/isomerase B5S57_10590 PF13378 Enolase C-terminal domain-like B5S57_10595 PF00501 AMP-binding enzyme B5S57_10595 PF13193 AMP-binding enzyme C-terminal domain B5S57_10615 PF07690 Major Facilitator Superfamily B5S57_10630 PF00291 Pyridoxal-phosphate dependent enzyme B5S57_10635 PF01037 Lrp/AsnC ligand binding domain B5S57_10635 PF13404 AsnC-type helix-turn-helix domain B5S57_10645 PF09619 Type III secretion system lipoprotein chaperone (YscW) B5S57_10650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B5S57_10660 PF00990 Diguanylate cyclase, GGDEF domain B5S57_10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_10670 PF03466 LysR substrate binding domain B5S57_10685 PF00501 AMP-binding enzyme B5S57_10695 PF00106 short chain dehydrogenase B5S57_10705 PF00072 Response regulator receiver domain B5S57_10705 PF00486 Transcriptional regulatory protein, C terminal B5S57_10710 PF00512 His Kinase A (phospho-acceptor) domain B5S57_10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_10710 PF08521 Two-component sensor kinase N-terminal B5S57_10715 PF08019 Phosphoethanolamine transferase EptA/EptB B5S57_10715 PF00884 Sulfatase B5S57_10720 PF01037 Lrp/AsnC ligand binding domain B5S57_10725 PF01810 LysE type translocator B5S57_10730 PF02080 TrkA-C domain B5S57_10730 PF06826 Predicted Permease Membrane Region B5S57_10735 PF00486 Transcriptional regulatory protein, C terminal B5S57_10735 PF00072 Response regulator receiver domain B5S57_10740 PF00512 His Kinase A (phospho-acceptor) domain B5S57_10740 PF00672 HAMP domain B5S57_10740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_10755 PF00356 Bacterial regulatory proteins, lacI family B5S57_10755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family B5S57_10760 PF00920 Dehydratase family B5S57_10765 PF01202 Shikimate kinase B5S57_10770 PF02447 GntP family permease B5S57_10775 PF01081 KDPG and KHG aldolase B5S57_10790 PF06629 MltA-interacting protein MipA B5S57_10795 PF02801 Beta-ketoacyl synthase, C-terminal domain B5S57_10795 PF00109 Beta-ketoacyl synthase, N-terminal domain B5S57_10805 PF07977 FabA-like domain B5S57_10810 PF02801 Beta-ketoacyl synthase, C-terminal domain B5S57_10810 PF00109 Beta-ketoacyl synthase, N-terminal domain B5S57_10835 PF00221 Aromatic amino acid lyase B5S57_10840 PF00535 Glycosyl transferase family 2 B5S57_10850 PF00501 AMP-binding enzyme B5S57_10850 PF13193 AMP-binding enzyme C-terminal domain B5S57_10860 PF00550 Phosphopantetheine attachment site B5S57_10865 PF00550 Phosphopantetheine attachment site B5S57_10875 PF13737 Transposase DDE domain B5S57_10895 PF04820 Tryptophan halogenase B5S57_10900 PF00512 His Kinase A (phospho-acceptor) domain B5S57_10900 PF09308 LuxQ, periplasmic B5S57_10900 PF00072 Response regulator receiver domain B5S57_10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_10905 PF00990 Diguanylate cyclase, GGDEF domain B5S57_10905 PF00563 EAL domain B5S57_10905 PF03707 Bacterial signalling protein N terminal repeat B5S57_10910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B5S57_10915 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_10920 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_10920 PF12911 N-terminal TM domain of oligopeptide transport permease C B5S57_10925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_10925 PF00005 ABC transporter B5S57_10930 PF00005 ABC transporter B5S57_10930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_10935 PF13409 Glutathione S-transferase, N-terminal domain B5S57_10940 PF01515 Phosphate acetyl/butaryl transferase B5S57_10940 PF07085 DRTGG domain B5S57_10945 PF00871 Acetokinase family B5S57_10950 PF04217 Protein of unknown function, DUF412 B5S57_10960 PF02653 Branched-chain amino acid transport system / permease component B5S57_10965 PF00005 ABC transporter B5S57_10970 PF01207 Dihydrouridine synthase (Dus) B5S57_10975 PF07516 SecA Wing and Scaffold domain B5S57_10975 PF02810 SEC-C motif B5S57_10975 PF01043 SecA preprotein cross-linking domain B5S57_10975 PF07517 SecA DEAD-like domain B5S57_10980 PF03548 Outer membrane lipoprotein carrier protein LolA B5S57_10985 PF12002 MgsA AAA+ ATPase C terminal B5S57_10985 PF16193 AAA C-terminal domain B5S57_10985 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_10990 PF02403 Seryl-tRNA synthetase N-terminal domain B5S57_10990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B5S57_10995 PF00202 Aminotransferase class-III B5S57_11000 PF04055 Radical SAM superfamily B5S57_11000 PF06968 Biotin and Thiamin Synthesis associated domain B5S57_11005 PF00155 Aminotransferase class I and II B5S57_11010 PF08241 Methyltransferase domain B5S57_11020 PF02600 Disulfide bond formation protein DsbB B5S57_11025 PF06450 Bacterial Na+/H+ antiporter B (NhaB) B5S57_11030 PF00392 Bacterial regulatory proteins, gntR family B5S57_11030 PF07840 FadR C-terminal domain B5S57_11040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_11040 PF00672 HAMP domain B5S57_11045 PF01230 HIT domain B5S57_11060 PF08139 Prokaryotic membrane lipoprotein lipid attachment site B5S57_11060 PF13036 Peptidoglycan-synthase activator LpoB B5S57_11075 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_11080 PF12563 Hemolytic toxin N terminal B5S57_11080 PF16458 Beta-prism lectin B5S57_11080 PF07968 Leukocidin/Hemolysin toxin family B5S57_11090 PF00270 DEAD/DEAH box helicase B5S57_11090 PF02559 CarD-like/TRCF domain B5S57_11090 PF03461 TRCF domain B5S57_11090 PF00271 Helicase conserved C-terminal domain B5S57_11090 PF17757 UvrB interaction domain B5S57_11100 PF02687 FtsX-like permease family B5S57_11100 PF12704 MacB-like periplasmic core domain B5S57_11105 PF00005 ABC transporter B5S57_11110 PF12704 MacB-like periplasmic core domain B5S57_11110 PF02687 FtsX-like permease family B5S57_11120 PF00753 Metallo-beta-lactamase superfamily B5S57_11120 PF13567 Domain of unknown function (DUF4131) B5S57_11120 PF03772 Competence protein B5S57_11125 PF00005 ABC transporter B5S57_11125 PF00664 ABC transporter transmembrane region B5S57_11130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase B5S57_11135 PF03966 Trm112p-like protein B5S57_11140 PF02348 Cytidylyltransferase B5S57_11150 PF04293 SpoVR like protein B5S57_11155 PF04285 Protein of unknown function (DUF444) B5S57_11160 PF08298 PrkA AAA domain B5S57_11160 PF06798 PrkA serine protein kinase C-terminal domain B5S57_11175 PF04055 Radical SAM superfamily B5S57_11180 PF00672 HAMP domain B5S57_11180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_11190 PF02901 Pyruvate formate lyase-like B5S57_11190 PF01228 Glycine radical B5S57_11205 PF00005 ABC transporter B5S57_11210 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_11215 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_11220 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_11225 PF03372 Endonuclease/Exonuclease/phosphatase family B5S57_11230 PF00672 HAMP domain B5S57_11230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_11235 PF10689 Protein of unknown function (DUF2496) B5S57_11240 PF07445 Primosomal replication protein priC B5S57_11245 PF01925 Sulfite exporter TauE/SafE B5S57_11250 PF06733 DEAD_2 B5S57_11250 PF13307 Helicase C-terminal domain B5S57_11260 PF02810 SEC-C motif B5S57_11265 PF00563 EAL domain B5S57_11265 PF08668 HDOD domain B5S57_11270 PF00149 Calcineurin-like phosphoesterase B5S57_11275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B5S57_11280 PF09190 DALR domain B5S57_11280 PF01406 tRNA synthetases class I (C) catalytic domain B5S57_11285 PF02075 Crossover junction endodeoxyribonuclease RuvC B5S57_11290 PF07499 RuvA, C-terminal domain B5S57_11290 PF01330 RuvA N terminal domain B5S57_11295 PF05491 RuvB C-terminal winged helix domain B5S57_11295 PF05496 Holliday junction DNA helicase RuvB P-loop domain B5S57_11295 PF17864 RuvB AAA lid domain B5S57_11300 PF01654 Cytochrome bd terminal oxidase subunit I B5S57_11305 PF02322 Cytochrome bd terminal oxidase subunit II B5S57_11310 PF08173 Membrane bound YbgT-like protein B5S57_11315 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) B5S57_11320 PF03061 Thioesterase superfamily B5S57_11325 PF01618 MotA/TolQ/ExbB proton channel family B5S57_11330 PF02472 Biopolymer transport protein ExbD/TolR B5S57_11345 PF00691 OmpA family B5S57_11350 PF16331 TolA binding protein trimerisation B5S57_11350 PF13525 Outer membrane lipoprotein B5S57_11355 PF02445 Quinolinate synthetase A protein B5S57_11360 PF03050 Transposase IS66 family B5S57_11360 PF13817 IS66 C-terminal element B5S57_11360 PF13007 Transposase C of IS166 homeodomain B5S57_11360 PF13005 zinc-finger binding domain of transposase IS66 B5S57_11380 PF09308 LuxQ, periplasmic B5S57_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_11380 PF00512 His Kinase A (phospho-acceptor) domain B5S57_11380 PF00072 Response regulator receiver domain B5S57_11385 PF06610 L-alanine exporter B5S57_11395 PF00589 Phage integrase family B5S57_11395 PF13356 Arm DNA-binding domain B5S57_11460 PF13737 Transposase DDE domain B5S57_11535 PF00717 Peptidase S24-like B5S57_11535 PF01381 Helix-turn-helix B5S57_11610 PF06147 Protein of unknown function (DUF968) B5S57_11675 PF03354 Phage Terminase B5S57_11690 PF00574 Clp protease B5S57_11820 PF00563 EAL domain B5S57_11820 PF13188 PAS domain B5S57_11820 PF03707 Bacterial signalling protein N terminal repeat B5S57_11820 PF00990 Diguanylate cyclase, GGDEF domain B5S57_11825 PF00171 Aldehyde dehydrogenase family B5S57_11840 PF16295 Tetracyclin repressor-like, C-terminal domain B5S57_11840 PF00440 Bacterial regulatory proteins, tetR family B5S57_11845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B5S57_11845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B5S57_11845 PF02770 Acyl-CoA dehydrogenase, middle domain B5S57_11845 PF09317 Domain of unknown function (DUF1974) B5S57_11850 PF12241 Trans-2-enoyl-CoA reductase catalytic region B5S57_11850 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase B5S57_11850 PF07055 Enoyl reductase FAD binding domain B5S57_11880 PF01565 FAD binding domain B5S57_11880 PF02913 FAD linked oxidases, C-terminal domain B5S57_11880 PF13183 4Fe-4S dicluster domain B5S57_11885 PF04191 Phospholipid methyltransferase B5S57_11895 PF00221 Aromatic amino acid lyase B5S57_11900 PF17392 Urocanase C-terminal domain B5S57_11900 PF17391 Urocanase N-terminal domain B5S57_11900 PF01175 Urocanase Rossmann-like domain B5S57_11905 PF00491 Arginase family B5S57_11910 PF01979 Amidohydrolase family B5S57_11915 PF07702 UTRA domain B5S57_11915 PF00392 Bacterial regulatory proteins, gntR family B5S57_11925 PF04269 Protein of unknown function, DUF440 B5S57_11930 PF08207 Elongation factor P (EF-P) KOW-like domain B5S57_11930 PF09285 Elongation factor P, C-terminal B5S57_11930 PF01132 Elongation factor P (EF-P) OB domain B5S57_11940 PF03104 DNA polymerase family B, exonuclease domain B5S57_11940 PF00136 DNA polymerase family B B5S57_11945 PF00196 Bacterial regulatory proteins, luxR family B5S57_11945 PF00072 Response regulator receiver domain B5S57_11950 PF02151 UvrB/uvrC motif B5S57_11950 PF08459 UvrC Helix-hairpin-helix N-terminal B5S57_11950 PF01541 GIY-YIG catalytic domain B5S57_11955 PF01066 CDP-alcohol phosphatidyltransferase B5S57_11990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain B5S57_11990 PF01409 tRNA synthetases class II core domain (F) B5S57_11995 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain B5S57_11995 PF03147 Ferredoxin-fold anticodon binding domain B5S57_11995 PF03484 tRNA synthetase B5 domain B5S57_11995 PF01588 Putative tRNA binding domain B5S57_11995 PF03483 B3/4 domain B5S57_12010 PF05724 Thiopurine S-methyltransferase (TPMT) B5S57_12015 PF08447 PAS fold B5S57_12015 PF13426 PAS domain B5S57_12015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12020 PF02222 ATP-grasp domain B5S57_12025 PF00563 EAL domain B5S57_12025 PF00990 Diguanylate cyclase, GGDEF domain B5S57_12025 PF08447 PAS fold B5S57_12025 PF08448 PAS fold B5S57_12030 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region B5S57_12030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B5S57_12035 PF04172 LrgB-like family B5S57_12040 PF03788 LrgA family B5S57_12045 PF08411 Exonuclease C-terminal B5S57_12045 PF00929 Exonuclease B5S57_12055 PF13460 NAD(P)H-binding B5S57_12060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12060 PF00672 HAMP domain B5S57_12060 PF02743 Cache domain B5S57_12065 PF03412 Peptidase C39 family B5S57_12065 PF00664 ABC transporter transmembrane region B5S57_12065 PF00005 ABC transporter B5S57_12070 PF13533 Biotin-lipoyl like B5S57_12100 PF00580 UvrD/REP helicase N-terminal domain B5S57_12100 PF13361 UvrD-like helicase C-terminal domain B5S57_12145 PF00578 AhpC/TSA family B5S57_12175 PF00664 ABC transporter transmembrane region B5S57_12175 PF03412 Peptidase C39 family B5S57_12175 PF00005 ABC transporter B5S57_12185 PF02794 RTX toxin acyltransferase family B5S57_12190 PF07634 RtxA repeat B5S57_12190 PF11647 Membrane Localization Domain B5S57_12190 PF12146 Serine aminopeptidase, S33 B5S57_12190 PF11713 Peptidase C80 family B5S57_12190 PF16671 Actin cross-linking domain B5S57_12200 PF02654 Cobalamin-5-phosphate synthase B5S57_12205 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase B5S57_12215 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family B5S57_12220 PF01032 FecCD transport family B5S57_12245 PF03466 LysR substrate binding domain B5S57_12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_12255 PF01863 Protein of unknown function DUF45 B5S57_12260 PF05971 RNA methyltransferase B5S57_12275 PF04204 Homoserine O-succinyltransferase B5S57_12295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_12310 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain B5S57_12310 PF17203 Single cache domain 3 B5S57_12310 PF00989 PAS fold B5S57_12315 PF00072 Response regulator receiver domain B5S57_12315 PF12431 Transcriptional regulator B5S57_12325 PF00072 Response regulator receiver domain B5S57_12325 PF01584 CheW-like domain B5S57_12330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) B5S57_12330 PF03714 Bacterial pullanase-associated domain B5S57_12330 PF18494 Pullulanase Ins domain B5S57_12330 PF17967 Pullulanase N2 domain B5S57_12330 PF11852 Domain of unknown function (DUF3372) B5S57_12340 PF00990 Diguanylate cyclase, GGDEF domain B5S57_12340 PF00072 Response regulator receiver domain B5S57_12365 PF02899 Phage integrase, N-terminal SAM-like domain B5S57_12365 PF00589 Phage integrase family B5S57_12390 PF04717 Type VI secretion system, phage-baseplate injector B5S57_12390 PF16671 Actin cross-linking domain B5S57_12435 PF10431 C-terminal, D2-small domain, of ClpB protein B5S57_12435 PF17871 AAA lid domain B5S57_12435 PF07724 AAA domain (Cdc48 subfamily) B5S57_12435 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_12440 PF07478 D-ala D-ala ligase C-terminus B5S57_12460 PF16697 Inner membrane component of T3SS, cytoplasmic domain B5S57_12485 PF00069 Protein kinase domain B5S57_12485 PF08239 Bacterial SH3 domain B5S57_12510 PF00486 Transcriptional regulatory protein, C terminal B5S57_12530 PF13005 zinc-finger binding domain of transposase IS66 B5S57_12530 PF13817 IS66 C-terminal element B5S57_12530 PF03050 Transposase IS66 family B5S57_12530 PF13007 Transposase C of IS166 homeodomain B5S57_12550 PF01042 Endoribonuclease L-PSP B5S57_12560 PF02322 Cytochrome bd terminal oxidase subunit II B5S57_12565 PF01654 Cytochrome bd terminal oxidase subunit I B5S57_12580 PF05114 Protein of unknown function (DUF692) B5S57_12605 PF00672 HAMP domain B5S57_12605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12605 PF12729 Four helix bundle sensory module for signal transduction B5S57_12615 PF07885 Ion channel B5S57_12620 PF00563 EAL domain B5S57_12620 PF12792 CSS motif domain associated with EAL B5S57_12625 PF00294 pfkB family carbohydrate kinase B5S57_12630 PF02378 Phosphotransferase system, EIIC B5S57_12630 PF00367 phosphotransferase system, EIIB B5S57_12635 PF00356 Bacterial regulatory proteins, lacI family B5S57_12640 PF08244 Glycosyl hydrolases family 32 C terminal B5S57_12640 PF00251 Glycosyl hydrolases family 32 N-terminal domain B5S57_12645 PF00672 HAMP domain B5S57_12645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12660 PF00005 ABC transporter B5S57_12665 PF01032 FecCD transport family B5S57_12675 PF02472 Biopolymer transport protein ExbD/TolR B5S57_12680 PF01618 MotA/TolQ/ExbB proton channel family B5S57_12685 PF03544 Gram-negative bacterial TonB protein C-terminal B5S57_12690 PF06228 Haem utilisation ChuX/HutX B5S57_12695 PF01243 Pyridoxamine 5'-phosphate oxidase B5S57_12700 PF07715 TonB-dependent Receptor Plug Domain B5S57_12700 PF00593 TonB dependent receptor B5S57_12700 PF04886 PT repeat B5S57_12705 PF00480 ROK family B5S57_12710 PF00925 GTP cyclohydrolase II B5S57_12735 PF03734 L,D-transpeptidase catalytic domain B5S57_12735 PF01471 Putative peptidoglycan binding domain B5S57_12740 PF05951 Bacterial protein of unknown function (DUF882) B5S57_12745 PF00753 Metallo-beta-lactamase superfamily B5S57_12760 PF01047 MarR family B5S57_12765 PF02028 BCCT, betaine/carnitine/choline family transporter B5S57_12770 PF00672 HAMP domain B5S57_12770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12770 PF02743 Cache domain B5S57_12775 PF00929 Exonuclease B5S57_12775 PF02811 PHP domain B5S57_12775 PF14579 Helix-hairpin-helix motif B5S57_12775 PF14480 DNA polymerase III polC-type N-terminus I B5S57_12775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B5S57_12775 PF11490 DNA polymerase III polC-type N-terminus II B5S57_12775 PF07733 Bacterial DNA polymerase III alpha NTPase domain B5S57_12780 PF00571 CBS domain B5S57_12785 PF00155 Aminotransferase class I and II B5S57_12790 PF00672 HAMP domain B5S57_12790 PF01966 HD domain B5S57_12795 PF00672 HAMP domain B5S57_12795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12795 PF12729 Four helix bundle sensory module for signal transduction B5S57_12800 PF00072 Response regulator receiver domain B5S57_12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_12810 PF01584 CheW-like domain B5S57_12810 PF09078 CheY binding B5S57_12810 PF02895 Signal transducing histidine kinase, homodimeric domain B5S57_12810 PF01627 Hpt domain B5S57_12815 PF12729 Four helix bundle sensory module for signal transduction B5S57_12815 PF00672 HAMP domain B5S57_12815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12820 PF01584 CheW-like domain B5S57_12825 PF01739 CheR methyltransferase, SAM binding domain B5S57_12825 PF03705 CheR methyltransferase, all-alpha domain B5S57_12830 PF03975 CheD chemotactic sensory transduction B5S57_12835 PF01339 CheB methylesterase B5S57_12835 PF00072 Response regulator receiver domain B5S57_12845 PF00152 tRNA synthetases class II (D, K and N) B5S57_12845 PF01336 OB-fold nucleic acid binding domain B5S57_12850 PF00672 HAMP domain B5S57_12850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12850 PF17200 Single Cache domain 2 B5S57_12855 PF01242 6-pyruvoyl tetrahydropterin synthase B5S57_12860 PF04231 Endonuclease I B5S57_12865 PF12561 ToxR activated gene A lipoprotein domain B5S57_12865 PF00041 Fibronectin type III domain B5S57_12870 PF03313 Serine dehydratase alpha chain B5S57_12870 PF03315 Serine dehydratase beta chain B5S57_12875 PF03222 Tryptophan/tyrosine permease family B5S57_12880 PF00293 NUDIX domain B5S57_12885 PF00425 chorismate binding enzyme B5S57_12885 PF04715 Anthranilate synthase component I, N terminal region B5S57_12900 PF04317 YcjX-like family, DUF463 B5S57_12905 PF05128 Domain of unknown function (DUF697) B5S57_12910 PF00158 Sigma-54 interaction domain B5S57_12910 PF18024 Helix-turn-helix domain B5S57_12915 PF13302 Acetyltransferase (GNAT) domain B5S57_12925 PF00990 Diguanylate cyclase, GGDEF domain B5S57_12930 PF00892 EamA-like transporter family B5S57_12935 PF00842 Alanine racemase, C-terminal domain B5S57_12935 PF01168 Alanine racemase, N-terminal domain B5S57_12940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_12940 PF00672 HAMP domain B5S57_12950 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) B5S57_12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_12960 PF00512 His Kinase A (phospho-acceptor) domain B5S57_12960 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_12965 PF00072 Response regulator receiver domain B5S57_12965 PF00158 Sigma-54 interaction domain B5S57_12965 PF02954 Bacterial regulatory protein, Fis family B5S57_12975 PF00313 'Cold-shock' DNA-binding domain B5S57_12980 PF03264 NapC/NirT cytochrome c family, N-terminal region B5S57_12985 PF00384 Molybdopterin oxidoreductase B5S57_12985 PF18364 Molybdopterin oxidoreductase N-terminal domain B5S57_12985 PF01568 Molydopterin dinucleotide binding domain B5S57_12990 PF00270 DEAD/DEAH box helicase B5S57_12990 PF00271 Helicase conserved C-terminal domain B5S57_12995 PF00232 Glycosyl hydrolase family 1 B5S57_13000 PF00356 Bacterial regulatory proteins, lacI family B5S57_13025 PF00465 Iron-containing alcohol dehydrogenase B5S57_13030 PF00012 Hsp70 protein B5S57_13035 PF00012 Hsp70 protein B5S57_13070 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold B5S57_13070 PF00271 Helicase conserved C-terminal domain B5S57_13070 PF04408 Helicase associated domain (HA2) B5S57_13070 PF11898 Domain of unknown function (DUF3418) B5S57_13070 PF00270 DEAD/DEAH box helicase B5S57_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_13080 PF03466 LysR substrate binding domain B5S57_13085 PF07690 Major Facilitator Superfamily B5S57_13100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B5S57_13100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain B5S57_13105 PF00474 Sodium:solute symporter family B5S57_13110 PF01380 SIS domain B5S57_13110 PF00571 CBS domain B5S57_13115 PF14579 Helix-hairpin-helix motif B5S57_13115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B5S57_13115 PF07733 Bacterial DNA polymerase III alpha NTPase domain B5S57_13115 PF00929 Exonuclease B5S57_13115 PF02811 PHP domain B5S57_13125 PF04962 KduI/IolB family B5S57_13130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B5S57_13130 PF00205 Thiamine pyrophosphate enzyme, central domain B5S57_13130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B5S57_13135 PF00294 pfkB family carbohydrate kinase B5S57_13140 PF01261 Xylose isomerase-like TIM barrel B5S57_13150 PF00171 Aldehyde dehydrogenase family B5S57_13160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain B5S57_13160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B5S57_13165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase B5S57_13180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) B5S57_13200 PF13737 Transposase DDE domain B5S57_13205 PF00271 Helicase conserved C-terminal domain B5S57_13225 PF13817 IS66 C-terminal element B5S57_13225 PF13005 zinc-finger binding domain of transposase IS66 B5S57_13225 PF03050 Transposase IS66 family B5S57_13225 PF13007 Transposase C of IS166 homeodomain B5S57_13235 PF02074 Carboxypeptidase Taq (M32) metallopeptidase B5S57_13240 PF01810 LysE type translocator B5S57_13245 PF01235 Sodium:alanine symporter family B5S57_13255 PF01546 Peptidase family M20/M25/M40 B5S57_13255 PF07687 Peptidase dimerisation domain B5S57_13260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B5S57_13265 PF04209 homogentisate 1,2-dioxygenase B5S57_13275 PF02798 Glutathione S-transferase, N-terminal domain B5S57_13275 PF14497 Glutathione S-transferase, C-terminal domain B5S57_13280 PF04389 Peptidase family M28 B5S57_13280 PF04151 Bacterial pre-peptidase C-terminal domain B5S57_13305 PF01618 MotA/TolQ/ExbB proton channel family B5S57_13310 PF01618 MotA/TolQ/ExbB proton channel family B5S57_13315 PF02472 Biopolymer transport protein ExbD/TolR B5S57_13330 PF01734 Patatin-like phospholipase B5S57_13335 PF01068 ATP dependent DNA ligase domain B5S57_13335 PF14743 DNA ligase OB-like domain B5S57_13340 PF01554 MatE B5S57_13360 PF00877 NlpC/P60 family B5S57_13365 PF12729 Four helix bundle sensory module for signal transduction B5S57_13365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_13365 PF00672 HAMP domain B5S57_13380 PF00480 ROK family B5S57_13390 PF03205 Molybdopterin guanine dinucleotide synthesis protein B B5S57_13395 PF12804 MobA-like NTP transferase domain B5S57_13400 PF00005 ABC transporter B5S57_13400 PF08402 TOBE domain B5S57_13405 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_13415 PF07690 Major Facilitator Superfamily B5S57_13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_13420 PF07730 Histidine kinase B5S57_13420 PF05231 MASE1 B5S57_13425 PF00072 Response regulator receiver domain B5S57_13425 PF00196 Bacterial regulatory proteins, luxR family B5S57_13430 PF00005 ABC transporter B5S57_13430 PF12848 ABC transporter B5S57_13435 PF00909 Ammonium Transporter Family B5S57_13440 PF02146 Sir2 family B5S57_13445 PF13416 Bacterial extracellular solute-binding protein B5S57_13450 PF13416 Bacterial extracellular solute-binding protein B5S57_13455 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_13460 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_13465 PF08402 TOBE domain B5S57_13465 PF00005 ABC transporter B5S57_13485 PF01171 PP-loop family B5S57_13490 PF00582 Universal stress protein family B5S57_13495 PF00027 Cyclic nucleotide-binding domain B5S57_13495 PF13545 Crp-like helix-turn-helix domain B5S57_13510 PF00403 Heavy-metal-associated domain B5S57_13520 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP B5S57_13520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B5S57_13535 PF00115 Cytochrome C and Quinol oxidase polypeptide I B5S57_13565 PF17414 MatP C-terminal ribbon-helix-helix domain B5S57_13565 PF06303 MatP N-terminal domain B5S57_13570 PF13654 AAA domain B5S57_13570 PF05362 Lon protease (S16) C-terminal proteolytic domain B5S57_13575 PF07977 FabA-like domain B5S57_13580 PF04957 Ribosome modulation factor B5S57_13600 PF10672 S-adenosylmethionine-dependent methyltransferase B5S57_13600 PF02926 THUMP domain B5S57_13600 PF01170 Putative RNA methylase family UPF0020 B5S57_13605 PF07126 Cell-division protein ZapC B5S57_13610 PF01180 Dihydroorotate dehydrogenase B5S57_13615 PF05088 Bacterial NAD-glutamate dehydrogenase B5S57_13625 PF01433 Peptidase family M1 domain B5S57_13625 PF17432 Domain of unknown function (DUF3458_C) ARM repeats B5S57_13625 PF11940 Domain of unknown function (DUF3458) Ig-like fold B5S57_13635 PF11818 C-terminal domain of tail specific protease (DUF3340) B5S57_13635 PF00595 PDZ domain B5S57_13635 PF03572 Peptidase family S41 B5S57_13635 PF17804 Tail specific protease N-terminal domain B5S57_13645 PF13185 GAF domain B5S57_13650 PF00005 ABC transporter B5S57_13650 PF00664 ABC transporter transmembrane region B5S57_13655 PF04403 Paraquat-inducible protein A B5S57_13660 PF02470 MlaD protein B5S57_13665 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF B5S57_13665 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF B5S57_13665 PF01189 16S rRNA methyltransferase RsmB/F B5S57_13670 PF17783 CvfB-like winged helix domain B5S57_13670 PF13509 S1 domain B5S57_13685 PF00391 PEP-utilising enzyme, mobile domain B5S57_13685 PF02896 PEP-utilising enzyme, TIM barrel domain B5S57_13685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B5S57_13690 PF00793 DAHP synthetase I family B5S57_13695 PF04461 Protein of unknown function (DUF520) B5S57_13705 PF14824 Sirohaem biosynthesis protein central B5S57_13705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B5S57_13705 PF10414 Sirohaem synthase dimerisation region B5S57_13710 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_13715 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_13720 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_13725 PF00005 ABC transporter B5S57_13730 PF01027 Inhibitor of apoptosis-promoting Bax1 B5S57_13735 PF04358 DsrC like protein B5S57_13740 PF00708 Acylphosphatase B5S57_13745 PF10672 S-adenosylmethionine-dependent methyltransferase B5S57_13745 PF17785 PUA-like domain B5S57_13750 PF14319 Transposase zinc-binding domain B5S57_13750 PF04986 Putative transposase B5S57_13780 PF06508 Queuosine biosynthesis protein QueC B5S57_13785 PF04055 Radical SAM superfamily B5S57_13805 PF13193 AMP-binding enzyme C-terminal domain B5S57_13805 PF00501 AMP-binding enzyme B5S57_13805 PF16177 Acetyl-coenzyme A synthetase N-terminus B5S57_13810 PF04303 PrpF protein B5S57_13815 PF00330 Aconitase family (aconitate hydratase) B5S57_13815 PF00694 Aconitase C-terminal domain B5S57_13820 PF00285 Citrate synthase, C-terminal domain B5S57_13850 PF01970 Tripartite tricarboxylate transporter TctA family B5S57_13855 PF00486 Transcriptional regulatory protein, C terminal B5S57_13855 PF00072 Response regulator receiver domain B5S57_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_13860 PF00512 His Kinase A (phospho-acceptor) domain B5S57_13860 PF00672 HAMP domain B5S57_13865 PF01219 Prokaryotic diacylglycerol kinase B5S57_13870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B5S57_13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_13875 PF03466 LysR substrate binding domain B5S57_13880 PF02653 Branched-chain amino acid transport system / permease component B5S57_13885 PF00005 ABC transporter B5S57_13890 PF13407 Periplasmic binding protein domain B5S57_13915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B5S57_13925 PF12833 Helix-turn-helix domain B5S57_13930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B5S57_13930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B5S57_13930 PF02378 Phosphotransferase system, EIIC B5S57_13935 PF01238 Phosphomannose isomerase type I B5S57_13950 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase B5S57_13955 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase B5S57_13960 PF04223 Citrate lyase, alpha subunit (CitF) B5S57_13965 PF03328 HpcH/HpaI aldolase/citrate lyase family B5S57_13970 PF06857 Malonate decarboxylase delta subunit (MdcD) B5S57_13975 PF12431 Transcriptional regulator B5S57_13975 PF00072 Response regulator receiver domain B5S57_13980 PF17203 Single cache domain 3 B5S57_13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_13985 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit B5S57_13990 PF02436 Conserved carboxylase domain B5S57_13990 PF00682 HMGL-like B5S57_13990 PF00364 Biotin-requiring enzyme B5S57_14000 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase B5S57_14005 PF08218 Citrate lyase ligase C-terminal domain B5S57_14010 PF01970 Tripartite tricarboxylate transporter TctA family B5S57_14025 PF12729 Four helix bundle sensory module for signal transduction B5S57_14025 PF00672 HAMP domain B5S57_14025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_14030 PF03989 DNA gyrase C-terminal domain, beta-propeller B5S57_14030 PF00521 DNA gyrase/topoisomerase IV, subunit A B5S57_14040 PF03477 ATP cone domain B5S57_14040 PF00317 Ribonucleotide reductase, all-alpha domain B5S57_14040 PF02867 Ribonucleotide reductase, barrel domain B5S57_14045 PF00268 Ribonucleotide reductase, small chain B5S57_14050 PF00175 Oxidoreductase NAD-binding domain B5S57_14050 PF00111 2Fe-2S iron-sulfur cluster binding domain B5S57_14050 PF00970 Oxidoreductase FAD-binding domain B5S57_14060 PF00994 Probable molybdopterin binding domain B5S57_14075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_14075 PF00672 HAMP domain B5S57_14075 PF17200 Single Cache domain 2 B5S57_14085 PF16653 Saccharopine dehydrogenase C-terminal domain B5S57_14085 PF03435 Saccharopine dehydrogenase NADP binding domain B5S57_14090 PF00202 Aminotransferase class-III B5S57_14100 PF06965 Na+/H+ antiporter 1 B5S57_14115 PF00005 ABC transporter B5S57_14120 PF01554 MatE B5S57_14125 PF13460 NAD(P)H-binding B5S57_14125 PF11066 Protein of unknown function (DUF2867) B5S57_14135 PF07690 Major Facilitator Superfamily B5S57_14140 PF01479 S4 domain B5S57_14140 PF00849 RNA pseudouridylate synthase B5S57_14145 PF04851 Type III restriction enzyme, res subunit B5S57_14145 PF00271 Helicase conserved C-terminal domain B5S57_14155 PF00072 Response regulator receiver domain B5S57_14155 PF00486 Transcriptional regulatory protein, C terminal B5S57_14160 PF00672 HAMP domain B5S57_14160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_14160 PF00512 His Kinase A (phospho-acceptor) domain B5S57_14180 PF00270 DEAD/DEAH box helicase B5S57_14180 PF00271 Helicase conserved C-terminal domain B5S57_14195 PF13737 Transposase DDE domain B5S57_14210 PF06945 Protein of unknown function (DUF1289) B5S57_14220 PF13416 Bacterial extracellular solute-binding protein B5S57_14225 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_14230 PF00005 ABC transporter B5S57_14235 PF01066 CDP-alcohol phosphatidyltransferase B5S57_14250 PF00849 RNA pseudouridylate synthase B5S57_14255 PF00209 Sodium:neurotransmitter symporter family B5S57_14260 PF13091 PLD-like domain B5S57_14260 PF13396 Phospholipase_D-nuclease N-terminal B5S57_14265 PF01053 Cys/Met metabolism PLP-dependent enzyme B5S57_14270 PF00117 Glutamine amidotransferase class-I B5S57_14270 PF13302 Acetyltransferase (GNAT) domain B5S57_14270 PF13673 Acetyltransferase (GNAT) domain B5S57_14270 PF00958 GMP synthase C terminal domain B5S57_14270 PF03352 Methyladenine glycosylase B5S57_14280 PF06667 Phage shock protein B B5S57_14285 PF04012 PspA/IM30 family B5S57_14290 PF00158 Sigma-54 interaction domain B5S57_14290 PF02954 Bacterial regulatory protein, Fis family B5S57_14295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B5S57_14300 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_14305 PF12911 N-terminal TM domain of oligopeptide transport permease C B5S57_14305 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_14310 PF00005 ABC transporter B5S57_14310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_14315 PF00005 ABC transporter B5S57_14330 PF02833 DHHA2 domain B5S57_14330 PF01368 DHH family B5S57_14340 PF18364 Molybdopterin oxidoreductase N-terminal domain B5S57_14340 PF00384 Molybdopterin oxidoreductase B5S57_14340 PF01568 Molydopterin dinucleotide binding domain B5S57_14345 PF03264 NapC/NirT cytochrome c family, N-terminal region B5S57_14350 PF06796 Periplasmic nitrate reductase protein NapE B5S57_14355 PF01226 Formate/nitrite transporter B5S57_14370 PF03466 LysR substrate binding domain B5S57_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_14380 PF02698 DUF218 domain B5S57_14385 PF00265 Thymidine kinase B5S57_14390 PF00152 tRNA synthetases class II (D, K and N) B5S57_14390 PF02938 GAD domain B5S57_14390 PF01336 OB-fold nucleic acid binding domain B5S57_14395 PF01904 Protein of unknown function DUF72 B5S57_14400 PF05925 Enterobacterial virulence protein IpgD B5S57_14405 PF13649 Methyltransferase domain B5S57_14415 PF08443 RimK-like ATP-grasp domain B5S57_14415 PF18030 RimK PreATP-grasp domain B5S57_14430 PF04310 MukB N-terminal B5S57_14430 PF16330 MukB hinge domain B5S57_14435 PF04288 MukE-like family B5S57_14440 PF17193 MukF C-terminal domain B5S57_14440 PF03882 MukF winged-helix domain B5S57_14440 PF17192 MukF middle domain B5S57_14450 PF02698 DUF218 domain B5S57_14455 PF00072 Response regulator receiver domain B5S57_14455 PF00486 Transcriptional regulatory protein, C terminal B5S57_14460 PF02613 Nitrate reductase delta subunit B5S57_14465 PF00356 Bacterial regulatory proteins, lacI family B5S57_14470 PF04994 TfoX C-terminal domain B5S57_14470 PF04993 TfoX N-terminal domain B5S57_14490 PF08323 Starch synthase catalytic domain B5S57_14490 PF00534 Glycosyl transferases group 1 B5S57_14495 PF00483 Nucleotidyl transferase B5S57_14500 PF08272 Topoisomerase I zinc-ribbon-like B5S57_14500 PF01396 Topoisomerase DNA binding C4 zinc finger B5S57_14500 PF01751 Toprim domain B5S57_14500 PF01131 DNA topoisomerase B5S57_14505 PF10692 Protein of unknown function (DUF2498) B5S57_14510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B5S57_14515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase B5S57_14520 PF04376 Arginine-tRNA-protein transferase, N terminus B5S57_14520 PF04377 Arginine-tRNA-protein transferase, C terminus B5S57_14525 PF01176 Translation initiation factor 1A / IF-1 B5S57_14530 PF07724 AAA domain (Cdc48 subfamily) B5S57_14530 PF17871 AAA lid domain B5S57_14530 PF02861 Clp amino terminal domain, pathogenicity island component B5S57_14530 PF10431 C-terminal, D2-small domain, of ClpB protein B5S57_14530 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_14535 PF02617 ATP-dependent Clp protease adaptor protein ClpS B5S57_14540 PF00313 'Cold-shock' DNA-binding domain B5S57_14545 PF03971 Monomeric isocitrate dehydrogenase B5S57_14550 PF00849 RNA pseudouridylate synthase B5S57_14555 PF01502 Phosphoribosyl-AMP cyclohydrolase B5S57_14555 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase B5S57_14560 PF00977 Histidine biosynthesis protein B5S57_14565 PF00977 Histidine biosynthesis protein B5S57_14570 PF00117 Glutamine amidotransferase class-I B5S57_14575 PF08645 Polynucleotide kinase 3 phosphatase B5S57_14575 PF00475 Imidazoleglycerol-phosphate dehydratase B5S57_14580 PF00155 Aminotransferase class I and II B5S57_14585 PF00815 Histidinol dehydrogenase B5S57_14590 PF08029 HisG, C-terminal domain B5S57_14590 PF01634 ATP phosphoribosyltransferase B5S57_14595 PF03553 Na+/H+ antiporter family B5S57_14600 PF00816 H-NS histone family B5S57_14605 PF00294 pfkB family carbohydrate kinase B5S57_14620 PF04356 Protein of unknown function (DUF489) B5S57_14625 PF00206 Lyase B5S57_14625 PF08328 Adenylosuccinate lyase C-terminal B5S57_14630 PF00266 Aminotransferase class-V B5S57_14640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_14640 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_14640 PF00512 His Kinase A (phospho-acceptor) domain B5S57_14655 PF04993 TfoX N-terminal domain B5S57_14655 PF04994 TfoX C-terminal domain B5S57_14665 PF03956 Lysine exporter LysO B5S57_14675 PF00282 Pyridoxal-dependent decarboxylase conserved domain B5S57_14680 PF01380 SIS domain B5S57_14680 PF01418 Helix-turn-helix domain, rpiR family B5S57_14685 PF00465 Iron-containing alcohol dehydrogenase B5S57_14690 PF00462 Glutaredoxin B5S57_14695 PF06826 Predicted Permease Membrane Region B5S57_14695 PF02080 TrkA-C domain B5S57_14700 PF01259 SAICAR synthetase B5S57_14710 PF00390 Malic enzyme, N-terminal domain B5S57_14710 PF03949 Malic enzyme, NAD binding domain B5S57_14720 PF02698 DUF218 domain B5S57_14725 PF00266 Aminotransferase class-V B5S57_14735 PF00990 Diguanylate cyclase, GGDEF domain B5S57_14735 PF00072 Response regulator receiver domain B5S57_14740 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_14745 PF00664 ABC transporter transmembrane region B5S57_14745 PF00005 ABC transporter B5S57_14750 PF00005 ABC transporter B5S57_14750 PF00664 ABC transporter transmembrane region B5S57_14765 PF08281 Sigma-70, region 4 B5S57_14765 PF04542 Sigma-70 region 2 B5S57_14775 PF03707 Bacterial signalling protein N terminal repeat B5S57_14775 PF00990 Diguanylate cyclase, GGDEF domain B5S57_14775 PF00563 EAL domain B5S57_14780 PF01479 S4 domain B5S57_14780 PF00849 RNA pseudouridylate synthase B5S57_14785 PF01300 Telomere recombination B5S57_14790 PF02811 PHP domain B5S57_14795 PF08056 Tryptophan operon leader peptide B5S57_14800 PF00425 chorismate binding enzyme B5S57_14800 PF04715 Anthranilate synthase component I, N terminal region B5S57_14805 PF00117 Glutamine amidotransferase class-I B5S57_14810 PF00591 Glycosyl transferase family, a/b domain B5S57_14810 PF02885 Glycosyl transferase family, helical bundle domain B5S57_14815 PF00218 Indole-3-glycerol phosphate synthase B5S57_14815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B5S57_14820 PF00291 Pyridoxal-phosphate dependent enzyme B5S57_14835 PF00375 Sodium:dicarboxylate symporter family B5S57_14845 PF04279 Intracellular septation protein A B5S57_14850 PF03061 Thioesterase superfamily B5S57_14855 PF03795 YCII-related domain B5S57_14865 PF01717 Cobalamin-independent synthase, Catalytic domain B5S57_14865 PF08267 Cobalamin-independent synthase, N-terminal domain B5S57_14870 PF03466 LysR substrate binding domain B5S57_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_14885 PF01590 GAF domain B5S57_14885 PF00563 EAL domain B5S57_14885 PF00989 PAS fold B5S57_14885 PF00990 Diguanylate cyclase, GGDEF domain B5S57_14890 PF00089 Trypsin B5S57_14895 PF08497 Radical SAM N-terminal B5S57_14895 PF04055 Radical SAM superfamily B5S57_14895 PF11842 Domain of unknown function (DUF3362) B5S57_14905 PF16036 Chalcone isomerase-like B5S57_14930 PF00106 short chain dehydrogenase B5S57_14940 PF01435 Peptidase family M48 B5S57_14950 PF01580 FtsK/SpoIIIE family B5S57_14950 PF09397 Ftsk gamma domain B5S57_14950 PF13491 4TM region of DNA translocase FtsK/SpoIIIE B5S57_14950 PF17854 FtsK alpha domain B5S57_14955 PF01037 Lrp/AsnC ligand binding domain B5S57_14960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B5S57_14960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B5S57_14970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_14970 PF03466 LysR substrate binding domain B5S57_14980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B5S57_14985 PF18073 Rubredoxin metal binding domain B5S57_14990 PF06305 Lipopolysaccharide assembly protein A domain B5S57_15000 PF00575 S1 RNA binding domain B5S57_15005 PF02224 Cytidylate kinase B5S57_15015 PF13145 PPIC-type PPIASE domain B5S57_15020 PF00216 Bacterial DNA-binding protein B5S57_15025 PF05362 Lon protease (S16) C-terminal proteolytic domain B5S57_15025 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_15025 PF02190 ATP-dependent protease La (LON) substrate-binding domain B5S57_15030 PF10431 C-terminal, D2-small domain, of ClpB protein B5S57_15030 PF07724 AAA domain (Cdc48 subfamily) B5S57_15030 PF06689 ClpX C4-type zinc finger B5S57_15035 PF00574 Clp protease B5S57_15040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B5S57_15040 PF05698 Bacterial trigger factor protein (TF) C-terminus B5S57_15040 PF05697 Bacterial trigger factor protein (TF) B5S57_15050 PF00512 His Kinase A (phospho-acceptor) domain B5S57_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_15050 PF02743 Cache domain B5S57_15055 PF00158 Sigma-54 interaction domain B5S57_15055 PF00072 Response regulator receiver domain B5S57_15055 PF02954 Bacterial regulatory protein, Fis family B5S57_15060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component B5S57_15065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component B5S57_15070 PF03480 Bacterial extracellular solute-binding protein, family 7 B5S57_15080 PF01547 Bacterial extracellular solute-binding protein B5S57_15085 PF00672 HAMP domain B5S57_15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_15085 PF00512 His Kinase A (phospho-acceptor) domain B5S57_15090 PF00072 Response regulator receiver domain B5S57_15090 PF00486 Transcriptional regulatory protein, C terminal B5S57_15095 PF02696 Uncharacterized ACR, YdiU/UPF0061 family B5S57_15100 PF03315 Serine dehydratase beta chain B5S57_15100 PF03313 Serine dehydratase alpha chain B5S57_15110 PF00270 DEAD/DEAH box helicase B5S57_15110 PF00271 Helicase conserved C-terminal domain B5S57_15115 PF02903 Alpha amylase, N-terminal ig-like domain B5S57_15115 PF00128 Alpha amylase, catalytic domain B5S57_15115 PF16657 Maltogenic Amylase, C-terminal domain B5S57_15120 PF02028 BCCT, betaine/carnitine/choline family transporter B5S57_15125 PF02310 B12 binding domain B5S57_15125 PF02574 Homocysteine S-methyltransferase B5S57_15125 PF00809 Pterin binding enzyme B5S57_15125 PF02965 Vitamin B12 dependent methionine synthase, activation domain B5S57_15125 PF02607 B12 binding domain B5S57_15135 PF09905 DNA-binding protein VF530 B5S57_15150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain B5S57_15150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B5S57_15155 PF00704 Glycosyl hydrolases family 18 B5S57_15155 PF06483 Chitinase C B5S57_15160 PF07662 Na+ dependent nucleoside transporter C-terminus B5S57_15160 PF01773 Na+ dependent nucleoside transporter N-terminus B5S57_15160 PF07670 Nucleoside recognition B5S57_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_15165 PF03466 LysR substrate binding domain B5S57_15170 PF13406 Transglycosylase SLT domain B5S57_15175 PF05166 YcgL domain B5S57_15180 PF03775 Septum formation inhibitor MinC, C-terminal domain B5S57_15180 PF05209 Septum formation inhibitor MinC, N-terminal domain B5S57_15185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B5S57_15190 PF03776 Septum formation topological specificity factor MinE B5S57_15195 PF00570 HRDC domain B5S57_15195 PF01612 3'-5' exonuclease B5S57_15200 PF00501 AMP-binding enzyme B5S57_15200 PF13193 AMP-binding enzyme C-terminal domain B5S57_15205 PF00561 alpha/beta hydrolase fold B5S57_15220 PF00814 Glycoprotease family B5S57_15225 PF04851 Type III restriction enzyme, res subunit B5S57_15225 PF13307 Helicase C-terminal domain B5S57_15235 PF01842 ACT domain B5S57_15235 PF00551 Formyl transferase B5S57_15240 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_15240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B5S57_15245 PF01343 Peptidase family S49 B5S57_15250 PF17763 Glutaminase/Asparaginase C-terminal domain B5S57_15250 PF00710 Asparaginase, N-terminal B5S57_15255 PF07023 Protein of unknown function (DUF1315) B5S57_15265 PF01641 SelR domain B5S57_15270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_15270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B5S57_15275 PF01263 Aldose 1-epimerase B5S57_15280 PF13847 Methyltransferase domain B5S57_15300 PF03692 Putative zinc- or iron-chelating domain B5S57_15310 PF02575 YbaB/EbfC DNA-binding family B5S57_15315 PF12169 DNA polymerase III subunits gamma and tau domain III B5S57_15315 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding B5S57_15315 PF12170 DNA polymerase III tau subunit V interacting with alpha B5S57_15320 PF00156 Phosphoribosyl transferase domain B5S57_15325 PF04304 Protein of unknown function (DUF454) B5S57_15330 PF00072 Response regulator receiver domain B5S57_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_15335 PF03466 LysR substrate binding domain B5S57_15340 PF00881 Nitroreductase family B5S57_15345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain B5S57_15345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain B5S57_15345 PF00378 Enoyl-CoA hydratase/isomerase B5S57_15350 PF02803 Thiolase, C-terminal domain B5S57_15350 PF00108 Thiolase, N-terminal domain B5S57_15365 PF08281 Sigma-70, region 4 B5S57_15365 PF04542 Sigma-70 region 2 B5S57_15375 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B5S57_15380 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B5S57_15385 PF12557 Cob(I)alamin adenosyltransferase N terminal B5S57_15385 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP B5S57_15390 PF05170 AsmA family B5S57_15395 PF00485 Phosphoribulokinase / Uridine kinase family B5S57_15400 PF10609 NUBPL iron-transfer P-loop NTPase B5S57_15405 PF01588 Putative tRNA binding domain B5S57_15405 PF09334 tRNA synthetases class I (M) B5S57_15415 PF01048 Phosphorylase superfamily B5S57_15420 PF00403 Heavy-metal-associated domain B5S57_15425 PF00392 Bacterial regulatory proteins, gntR family B5S57_15425 PF07085 DRTGG domain B5S57_15425 PF03061 Thioesterase superfamily B5S57_15425 PF00571 CBS domain B5S57_15430 PF00990 Diguanylate cyclase, GGDEF domain B5S57_15430 PF07694 5TMR of 5TMR-LYT B5S57_15435 PF02391 MoaE protein B5S57_15440 PF02597 ThiS family B5S57_15445 PF01967 MoaC family B5S57_15450 PF00994 Probable molybdopterin binding domain B5S57_15455 PF04055 Radical SAM superfamily B5S57_15455 PF06463 Molybdenum Cofactor Synthesis C B5S57_15460 PF01933 Uncharacterised protein family UPF0052 B5S57_15465 PF01627 Hpt domain B5S57_15470 PF00072 Response regulator receiver domain B5S57_15470 PF02954 Bacterial regulatory protein, Fis family B5S57_15470 PF00158 Sigma-54 interaction domain B5S57_15475 PF04851 Type III restriction enzyme, res subunit B5S57_15475 PF12344 Ultra-violet resistance protein B B5S57_15475 PF17757 UvrB interaction domain B5S57_15475 PF02151 UvrB/uvrC motif B5S57_15475 PF00271 Helicase conserved C-terminal domain B5S57_15485 PF02927 Cellulase N-terminal ig-like domain B5S57_15485 PF02018 Carbohydrate binding domain B5S57_15485 PF00759 Glycosyl hydrolase family 9 B5S57_15490 PF00793 DAHP synthetase I family B5S57_15500 PF00425 chorismate binding enzyme B5S57_15505 PF00501 AMP-binding enzyme B5S57_15505 PF13193 AMP-binding enzyme C-terminal domain B5S57_15510 PF00550 Phosphopantetheine attachment site B5S57_15510 PF00857 Isochorismatase family B5S57_15515 PF05977 Transmembrane secretion effector B5S57_15520 PF00501 AMP-binding enzyme B5S57_15520 PF13193 AMP-binding enzyme C-terminal domain B5S57_15520 PF00668 Condensation domain B5S57_15520 PF00550 Phosphopantetheine attachment site B5S57_15525 PF04986 Putative transposase B5S57_15525 PF14319 Transposase zinc-binding domain B5S57_15530 PF13193 AMP-binding enzyme C-terminal domain B5S57_15530 PF00501 AMP-binding enzyme B5S57_15530 PF00668 Condensation domain B5S57_15530 PF00550 Phosphopantetheine attachment site B5S57_15530 PF00975 Thioesterase domain B5S57_15540 PF11806 Domain of unknown function (DUF3327) B5S57_15540 PF00756 Putative esterase B5S57_15545 PF07715 TonB-dependent Receptor Plug Domain B5S57_15550 PF17837 4'-phosphopantetheinyl transferase N-terminal domain B5S57_15550 PF01648 4'-phosphopantetheinyl transferase superfamily B5S57_15555 PF02508 Rnf-Nqr subunit, membrane protein B5S57_15560 PF04060 Putative Fe-S cluster B5S57_15565 PF10531 SLBB domain B5S57_15565 PF13375 RnfC Barrel sandwich hybrid domain B5S57_15565 PF12838 4Fe-4S dicluster domain B5S57_15565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit B5S57_15570 PF03116 NQR2, RnfD, RnfE family B5S57_15585 PF00633 Helix-hairpin-helix motif B5S57_15585 PF10576 Iron-sulfur binding domain of endonuclease III B5S57_15585 PF00730 HhH-GPD superfamily base excision DNA repair protein B5S57_15590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B5S57_15595 PF18393 MotY N-terminal domain B5S57_15595 PF00691 OmpA family B5S57_15600 PF00929 Exonuclease B5S57_15605 PF03553 Na+/H+ antiporter family B5S57_15605 PF13726 Na+-H+ antiporter family B5S57_15610 PF00156 Phosphoribosyl transferase domain B5S57_15615 PF02674 Colicin V production protein B5S57_15620 PF05036 Sporulation related domain B5S57_15625 PF02875 Mur ligase family, glutamate ligase domain B5S57_15625 PF08245 Mur ligase middle domain B5S57_15630 PF17848 Acetyl-coA carboxylase zinc finger domain B5S57_15630 PF01039 Carboxyl transferase domain B5S57_15645 PF00749 tRNA synthetases class I (E and Q), catalytic domain B5S57_15645 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain B5S57_15650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 B5S57_15650 PF02378 Phosphotransferase system, EIIC B5S57_15650 PF00367 phosphotransferase system, EIIB B5S57_15655 PF01979 Amidohydrolase family B5S57_15660 PF01047 MarR family B5S57_15660 PF00480 ROK family B5S57_15665 PF02254 TrkA-N domain B5S57_15665 PF00999 Sodium/hydrogen exchanger family B5S57_15670 PF00733 Asparagine synthase B5S57_15670 PF13537 Glutamine amidotransferase domain B5S57_15675 PF02357 Transcription termination factor nusG B5S57_15680 PF00854 POT family B5S57_15685 PF00762 Ferrochelatase B5S57_15690 PF05191 Adenylate kinase, active site lid B5S57_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_15695 PF00183 Hsp90 protein B5S57_15700 PF00486 Transcriptional regulatory protein, C terminal B5S57_15705 PF17323 Trans-membrane regulatory protein ToxS B5S57_15715 PF12850 Calcineurin-like phosphoesterase superfamily domain B5S57_15720 PF08338 Domain of unknown function (DUF1731) B5S57_15720 PF01370 NAD dependent epimerase/dehydratase family B5S57_15725 PF00085 Thioredoxin B5S57_15730 PF01145 SPFH domain / Band 7 family B5S57_15730 PF16200 C-terminal region of band_7 B5S57_15740 PF13411 MerR HTH family regulatory protein B5S57_15745 PF14319 Transposase zinc-binding domain B5S57_15745 PF04986 Putative transposase B5S57_15750 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) B5S57_15755 PF13609 Gram-negative porin B5S57_15765 PF04354 ZipA, C-terminal FtsZ-binding domain B5S57_15775 PF00291 Pyridoxal-phosphate dependent enzyme B5S57_15780 PF00381 PTS HPr component phosphorylation site B5S57_15785 PF02896 PEP-utilising enzyme, TIM barrel domain B5S57_15785 PF00391 PEP-utilising enzyme, mobile domain B5S57_15785 PF05524 PEP-utilising enzyme, N-terminal B5S57_15790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 B5S57_15795 PF01494 FAD binding domain B5S57_15800 PF00919 Uncharacterized protein family UPF0004 B5S57_15800 PF04055 Radical SAM superfamily B5S57_15800 PF01938 TRAM domain B5S57_15805 PF02562 PhoH-like protein B5S57_15815 PF00571 CBS domain B5S57_15815 PF03471 Transporter associated domain B5S57_15820 PF00795 Carbon-nitrogen hydrolase B5S57_15825 PF07295 Zinc-ribbon containing domain B5S57_15830 PF13603 Leucyl-tRNA synthetase, Domain 2 B5S57_15830 PF00133 tRNA synthetases class I (I, L, M and V) B5S57_15830 PF08264 Anticodon-binding domain of tRNA B5S57_15835 PF04390 Lipopolysaccharide-assembly B5S57_15840 PF06144 DNA polymerase III, delta subunit B5S57_15840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term B5S57_15850 PF02590 Predicted SPOUT methyltransferase B5S57_15855 PF03717 Penicillin-binding Protein dimerisation domain B5S57_15855 PF00905 Penicillin binding protein transpeptidase domain B5S57_15860 PF01098 Cell cycle protein B5S57_15865 PF05036 Sporulation related domain B5S57_15865 PF03330 Lytic transglycolase B5S57_15870 PF00768 D-alanyl-D-alanine carboxypeptidase B5S57_15870 PF07943 Penicillin-binding protein 5, C-terminal domain B5S57_15875 PF04359 Protein of unknown function (DUF493) B5S57_15880 PF03099 Biotin/lipoate A/B protein ligase family B5S57_15895 PF00464 Serine hydroxymethyltransferase B5S57_15905 PF02397 Bacterial sugar transferase B5S57_15915 PF18412 Outer-membrane lipoprotein Wza C-terminal domain B5S57_15915 PF02563 Polysaccharide biosynthesis/export protein B5S57_15915 PF10531 SLBB domain B5S57_15920 PF13614 AAA domain B5S57_15945 PF17945 Beta/Gamma crystallin B5S57_15945 PF12561 ToxR activated gene A lipoprotein domain B5S57_15950 PF03808 Glycosyl transferase WecB/TagA/CpsF family B5S57_15960 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_15960 PF06426 Serine acetyltransferase, N-terminal B5S57_15995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B5S57_15995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B5S57_15995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B5S57_16000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B5S57_16000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B5S57_16000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B5S57_16005 PF02350 UDP-N-acetylglucosamine 2-epimerase B5S57_16010 PF01451 Low molecular weight phosphotyrosine protein phosphatase B5S57_16015 PF00873 AcrB/AcrD/AcrF family B5S57_16020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B5S57_16055 PF00512 His Kinase A (phospho-acceptor) domain B5S57_16055 PF00672 HAMP domain B5S57_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_16060 PF00072 Response regulator receiver domain B5S57_16060 PF00486 Transcriptional regulatory protein, C terminal B5S57_16065 PF16657 Maltogenic Amylase, C-terminal domain B5S57_16065 PF00128 Alpha amylase, catalytic domain B5S57_16070 PF00367 phosphotransferase system, EIIB B5S57_16070 PF02378 Phosphotransferase system, EIIC B5S57_16075 PF00356 Bacterial regulatory proteins, lacI family B5S57_16090 PF00005 ABC transporter B5S57_16090 PF09383 NIL domain B5S57_16095 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_16100 PF03180 NLPA lipoprotein B5S57_16105 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) B5S57_16110 PF07348 Syd protein (SUKH-2) B5S57_16115 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term B5S57_16115 PF14489 QueF-like protein B5S57_16125 PF00990 Diguanylate cyclase, GGDEF domain B5S57_16130 PF03641 Possible lysine decarboxylase B5S57_16130 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases B5S57_16130 PF11892 Domain of unknown function (DUF3412) B5S57_16135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B5S57_16135 PF01367 5'-3' exonuclease, C-terminal SAM fold B5S57_16145 PF04241 Protein of unknown function (DUF423) B5S57_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_16150 PF03466 LysR substrate binding domain B5S57_16155 PF02926 THUMP domain B5S57_16155 PF02568 Thiamine biosynthesis protein (ThiI) B5S57_16160 PF00691 OmpA family B5S57_16160 PF13677 Membrane MotB of proton-channel complex MotA/MotB B5S57_16165 PF01618 MotA/TolQ/ExbB proton channel family B5S57_16170 PF02609 Exonuclease VII small subunit B5S57_16175 PF00348 Polyprenyl synthetase B5S57_16180 PF02779 Transketolase, pyrimidine binding domain B5S57_16180 PF02780 Transketolase, C-terminal domain B5S57_16180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase B5S57_16185 PF00849 RNA pseudouridylate synthase B5S57_16190 PF04287 tRNA pseudouridine synthase C B5S57_16215 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 B5S57_16220 PF00444 Ribosomal protein L36 B5S57_16225 PF01197 Ribosomal protein L31 B5S57_16230 PF18389 TrmO C-terminal domain B5S57_16230 PF01980 tRNA-methyltransferase O B5S57_16235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B5S57_16235 PF04073 Aminoacyl-tRNA editing domain B5S57_16235 PF03129 Anticodon binding domain B5S57_16240 PF04391 Protein of unknown function (DUF533) B5S57_16245 PF06786 Uncharacterised protein family (UPF0253) B5S57_16260 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal B5S57_16260 PF02769 AIR synthase related protein, C-terminal domain B5S57_16260 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain B5S57_16265 PF01464 Transglycosylase SLT domain B5S57_16265 PF00497 Bacterial extracellular solute-binding proteins, family 3 B5S57_16270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B5S57_16275 PF03466 LysR substrate binding domain B5S57_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_16280 PF00107 Zinc-binding dehydrogenase B5S57_16280 PF08240 Alcohol dehydrogenase GroES-like domain B5S57_16285 PF00756 Putative esterase B5S57_16290 PF03806 AbgT putative transporter family B5S57_16315 PF00114 Pilin (bacterial filament) B5S57_16315 PF07963 Prokaryotic N-terminal methylation motif B5S57_16320 PF00226 DnaJ domain B5S57_16320 PF01556 DnaJ C terminal domain B5S57_16320 PF00684 DnaJ central domain B5S57_16325 PF00012 Hsp70 protein B5S57_16330 PF01025 GrpE B5S57_16335 PF01513 ATP-NAD kinase B5S57_16340 PF01212 Beta-eliminating lyase B5S57_16345 PF02463 RecF/RecN/SMC N terminal domain B5S57_16350 PF04355 SmpA / OmlA family B5S57_16355 PF03658 RnfH family Ubiquitin B5S57_16360 PF03364 Polyketide cyclase / dehydrase and lipid transport B5S57_16365 PF01668 SmpB protein B5S57_16375 PF13356 Arm DNA-binding domain B5S57_16375 PF00589 Phage integrase family B5S57_16380 PF02384 N-6 DNA Methylase B5S57_16380 PF12161 HsdM N-terminal domain B5S57_16395 PF01420 Type I restriction modification DNA specificity domain B5S57_16400 PF00271 Helicase conserved C-terminal domain B5S57_16400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) B5S57_16400 PF08463 EcoEI R protein C-terminal B5S57_16400 PF04851 Type III restriction enzyme, res subunit B5S57_16405 PF14338 Mrr N-terminal domain B5S57_16405 PF04471 Restriction endonuclease B5S57_16420 PF04002 RadC-like JAB domain B5S57_16525 PF13737 Transposase DDE domain B5S57_16560 PF01979 Amidohydrolase family B5S57_16565 PF03841 L-seryl-tRNA selenium transferase B5S57_16570 PF07071 KDGP aldolase B5S57_16575 PF05043 Mga helix-turn-helix domain B5S57_16575 PF08279 HTH domain B5S57_16575 PF00874 PRD domain B5S57_16575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B5S57_16580 PF00141 Peroxidase B5S57_16590 PF02028 BCCT, betaine/carnitine/choline family transporter B5S57_16595 PF03466 LysR substrate binding domain B5S57_16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_16600 PF01266 FAD dependent oxidoreductase B5S57_16605 PF01235 Sodium:alanine symporter family B5S57_16610 PF01184 GPR1/FUN34/yaaH family B5S57_16615 PF06483 Chitinase C B5S57_16615 PF00704 Glycosyl hydrolases family 18 B5S57_16620 PF08543 Phosphomethylpyrimidine kinase B5S57_16625 PF00958 GMP synthase C terminal domain B5S57_16625 PF02540 NAD synthase B5S57_16625 PF00117 Glutamine amidotransferase class-I B5S57_16630 PF00571 CBS domain B5S57_16630 PF00478 IMP dehydrogenase / GMP reductase domain B5S57_16635 PF13742 OB-fold nucleic acid binding domain B5S57_16635 PF02601 Exonuclease VII, large subunit B5S57_16645 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B5S57_16645 PF01926 50S ribosome-binding GTPase B5S57_16650 PF13360 PQQ-like domain B5S57_16655 PF09976 Tetratricopeptide repeat-like domain B5S57_16660 PF03129 Anticodon binding domain B5S57_16660 PF13393 Histidyl-tRNA synthetase B5S57_16665 PF04551 GcpE protein B5S57_16670 PF13464 Domain of unknown function (DUF4115) B5S57_16675 PF04055 Radical SAM superfamily B5S57_16680 PF00334 Nucleoside diphosphate kinase B5S57_16685 PF12404 Peptidase B5S57_16685 PF00883 Cytosol aminopeptidase family, catalytic domain B5S57_16690 PF04384 Iron-sulphur cluster assembly B5S57_16695 PF00111 2Fe-2S iron-sulfur cluster binding domain B5S57_16700 PF00012 Hsp70 protein B5S57_16705 PF00226 DnaJ domain B5S57_16705 PF07743 HSCB C-terminal oligomerisation domain B5S57_16710 PF01521 Iron-sulphur cluster biosynthesis B5S57_16715 PF01592 NifU-like N terminal domain B5S57_16720 PF00266 Aminotransferase class-V B5S57_16725 PF02082 Transcriptional regulator B5S57_16730 PF00588 SpoU rRNA Methylase family B5S57_16735 PF00459 Inositol monophosphatase family B5S57_16740 PF07549 SecD/SecF GG Motif B5S57_16740 PF02355 Protein export membrane protein B5S57_16745 PF02355 Protein export membrane protein B5S57_16745 PF13721 SecD export protein N-terminal TM region B5S57_16745 PF07549 SecD/SecF GG Motif B5S57_16750 PF02699 Preprotein translocase subunit B5S57_16755 PF01702 Queuine tRNA-ribosyltransferase B5S57_16760 PF02547 Queuosine biosynthesis protein B5S57_16765 PF00571 CBS domain B5S57_16770 PF00463 Isocitrate lyase family B5S57_16775 PF01274 Malate synthase B5S57_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_16780 PF03466 LysR substrate binding domain B5S57_16785 PF00578 AhpC/TSA family B5S57_16785 PF10417 C-terminal domain of 1-Cys peroxiredoxin B5S57_16790 PF03932 CutC family B5S57_16795 PF01895 PhoU domain B5S57_16800 PF00005 ABC transporter B5S57_16805 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_16810 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_16815 PF17941 Polyphosphate kinase C-terminal domain 1 B5S57_16815 PF13089 Polyphosphate kinase N-terminal domain B5S57_16815 PF13090 Polyphosphate kinase C-terminal domain 2 B5S57_16815 PF02503 Polyphosphate kinase middle domain B5S57_16820 PF02541 Ppx/GppA phosphatase family B5S57_16825 PF12849 PBP superfamily domain B5S57_16830 PF11808 Phosphate regulon sensor protein PhoR B5S57_16830 PF00512 His Kinase A (phospho-acceptor) domain B5S57_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_16830 PF00989 PAS fold B5S57_16835 PF00072 Response regulator receiver domain B5S57_16835 PF00486 Transcriptional regulatory protein, C terminal B5S57_16840 PF04381 Putative exonuclease, RdgC B5S57_16850 PF00037 4Fe-4S binding domain B5S57_16855 PF00881 Nitroreductase family B5S57_16895 PF10431 C-terminal, D2-small domain, of ClpB protein B5S57_16895 PF02861 Clp amino terminal domain, pathogenicity island component B5S57_16895 PF17871 AAA lid domain B5S57_16895 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_16895 PF07724 AAA domain (Cdc48 subfamily) B5S57_16905 PF01479 S4 domain B5S57_16905 PF00849 RNA pseudouridylate synthase B5S57_16910 PF13525 Outer membrane lipoprotein B5S57_16915 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B5S57_16920 PF00800 Prephenate dehydratase B5S57_16920 PF01817 Chorismate mutase type II B5S57_16925 PF13416 Bacterial extracellular solute-binding protein B5S57_16930 PF00563 EAL domain B5S57_16930 PF00990 Diguanylate cyclase, GGDEF domain B5S57_16935 PF01931 Protein of unknown function DUF84 B5S57_16945 PF14718 Soluble lytic murein transglycosylase L domain B5S57_16945 PF01464 Transglycosylase SLT domain B5S57_16950 PF00005 ABC transporter B5S57_16950 PF12848 ABC transporter B5S57_16955 PF07238 PilZ domain B5S57_16960 PF02153 Prephenate dehydrogenase B5S57_16960 PF01817 Chorismate mutase type II B5S57_16965 PF00793 DAHP synthetase I family B5S57_16970 PF06580 Histidine kinase B5S57_16970 PF07694 5TMR of 5TMR-LYT B5S57_16975 PF00072 Response regulator receiver domain B5S57_16975 PF04397 LytTr DNA-binding domain B5S57_16980 PF00933 Glycosyl hydrolase family 3 N terminal domain B5S57_16985 PF03702 Anhydro-N-acetylmuramic acid kinase B5S57_16990 PF13580 SIS domain B5S57_17005 PF02554 Carbon starvation protein CstA B5S57_17010 PF02401 LytB protein B5S57_17015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B5S57_17020 PF01252 Signal peptidase (SPase) II B5S57_17025 PF06827 Zinc finger found in FPG and IleRS B5S57_17025 PF08264 Anticodon-binding domain of tRNA B5S57_17025 PF00133 tRNA synthetases class I (I, L, M and V) B5S57_17030 PF06574 FAD synthetase B5S57_17030 PF01687 Riboflavin kinase B5S57_17035 PF03023 Lipid II flippase MurJ B5S57_17040 PF01649 Ribosomal protein S20 B5S57_17045 PF01022 Bacterial regulatory protein, arsR family B5S57_17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_17050 PF03466 LysR substrate binding domain B5S57_17055 PF02690 Na+/Pi-cotransporter B5S57_17065 PF00303 Thymidylate synthase B5S57_17100 PF00303 Thymidylate synthase B5S57_17105 PF01790 Prolipoprotein diacylglyceryl transferase B5S57_17110 PF01925 Sulfite exporter TauE/SafE B5S57_17115 PF05524 PEP-utilising enzyme, N-terminal B5S57_17115 PF01590 GAF domain B5S57_17115 PF02896 PEP-utilising enzyme, TIM barrel domain B5S57_17115 PF00391 PEP-utilising enzyme, mobile domain B5S57_17120 PF00293 NUDIX domain B5S57_17125 PF02976 DNA mismatch repair enzyme MutH B5S57_17130 PF00248 Aldo/keto reductase family B5S57_17140 PF00072 Response regulator receiver domain B5S57_17140 PF00158 Sigma-54 interaction domain B5S57_17140 PF02954 Bacterial regulatory protein, Fis family B5S57_17145 PF00152 tRNA synthetases class II (D, K and N) B5S57_17145 PF01336 OB-fold nucleic acid binding domain B5S57_17155 PF05525 Branched-chain amino acid transport protein B5S57_17160 PF05175 Methyltransferase small domain B5S57_17165 PF00270 DEAD/DEAH box helicase B5S57_17165 PF00271 Helicase conserved C-terminal domain B5S57_17170 PF00009 Elongation factor Tu GTP binding domain B5S57_17170 PF03144 Elongation factor Tu domain 2 B5S57_17170 PF16658 Class II release factor RF3, C-terminal domain B5S57_17175 PF00990 Diguanylate cyclase, GGDEF domain B5S57_17175 PF00563 EAL domain B5S57_17175 PF03707 Bacterial signalling protein N terminal repeat B5S57_17180 PF00583 Acetyltransferase (GNAT) family B5S57_17190 PF13508 Acetyltransferase (GNAT) domain B5S57_17200 PF00990 Diguanylate cyclase, GGDEF domain B5S57_17200 PF00563 EAL domain B5S57_17200 PF03707 Bacterial signalling protein N terminal repeat B5S57_17220 PF01047 MarR family B5S57_17225 PF13181 Tetratricopeptide repeat B5S57_17225 PF07719 Tetratricopeptide repeat B5S57_17230 PF00575 S1 RNA binding domain B5S57_17230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain B5S57_17230 PF01138 3' exoribonuclease family, domain 1 B5S57_17230 PF03725 3' exoribonuclease family, domain 2 B5S57_17230 PF00013 KH domain B5S57_17235 PF00312 Ribosomal protein S15 B5S57_17240 PF01509 TruB family pseudouridylate synthase (N terminal domain) B5S57_17240 PF16198 tRNA pseudouridylate synthase B C-terminal domain B5S57_17240 PF09157 Pseudouridine synthase II TruB, C-terminal B5S57_17245 PF02033 Ribosome-binding factor A B5S57_17250 PF11987 Translation-initiation factor 2 B5S57_17250 PF04760 Translation initiation factor IF-2, N-terminal region B5S57_17250 PF00009 Elongation factor Tu GTP binding domain B5S57_17250 PF08364 Bacterial translation initiation factor IF-2 associated region B5S57_17255 PF13184 NusA-like KH domain B5S57_17255 PF08529 NusA N-terminal domain B5S57_17255 PF00575 S1 RNA binding domain B5S57_17260 PF02576 RimP N-terminal domain B5S57_17260 PF17384 RimP C-terminal SH3 domain B5S57_17275 PF03840 Preprotein translocase SecG subunit B5S57_17280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B5S57_17280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B5S57_17280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B5S57_17280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B5S57_17285 PF00809 Pterin binding enzyme B5S57_17290 PF06480 FtsH Extracellular B5S57_17290 PF00004 ATPase family associated with various cellular activities (AAA) B5S57_17290 PF17862 AAA+ lid domain B5S57_17290 PF01434 Peptidase family M41 B5S57_17295 PF01728 FtsJ-like methyltransferase B5S57_17300 PF01985 CRS1 / YhbY (CRM) domain B5S57_17305 PF01272 Transcription elongation factor, GreA/GreB, C-term B5S57_17305 PF03449 Transcription elongation factor, N-terminal B5S57_17310 PF13609 Gram-negative porin B5S57_17315 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family B5S57_17320 PF03448 MgtE intracellular N domain B5S57_17320 PF01769 Divalent cation transporter B5S57_17320 PF00571 CBS domain B5S57_17330 PF01479 S4 domain B5S57_17330 PF00579 tRNA synthetases class I (W and Y) B5S57_17335 PF01476 LysM domain B5S57_17335 PF08525 Opacity-associated protein A N-terminal motif B5S57_17335 PF01551 Peptidase family M23 B5S57_17340 PF00873 AcrB/AcrD/AcrF family B5S57_17350 PF01521 Iron-sulphur cluster biosynthesis B5S57_17355 PF00202 Aminotransferase class-III B5S57_17360 PF01594 AI-2E family transporter B5S57_17365 PF08468 Methyltransferase small domain N-terminal B5S57_17365 PF05175 Methyltransferase small domain B5S57_17370 PF00072 Response regulator receiver domain B5S57_17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_17370 PF00512 His Kinase A (phospho-acceptor) domain B5S57_17370 PF09308 LuxQ, periplasmic B5S57_17375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B5S57_17380 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_17385 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_17385 PF12911 N-terminal TM domain of oligopeptide transport permease C B5S57_17390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_17390 PF00005 ABC transporter B5S57_17395 PF00005 ABC transporter B5S57_17395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B5S57_17405 PF01869 BadF/BadG/BcrA/BcrD ATPase family B5S57_17410 PF02838 Glycosyl hydrolase family 20, domain 2 B5S57_17410 PF00728 Glycosyl hydrolase family 20, catalytic domain B5S57_17415 PF06165 Glycosyltransferase family 36 B5S57_17415 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain B5S57_17420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B5S57_17420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B5S57_17420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B5S57_17425 PF08402 TOBE domain B5S57_17425 PF00005 ABC transporter B5S57_17435 PF13416 Bacterial extracellular solute-binding protein B5S57_17440 PF00909 Ammonium Transporter Family B5S57_17445 PF00543 Nitrogen regulatory protein P-II B5S57_17450 PF06062 Uncharacterised protein family (UPF0231) B5S57_17455 PF05651 Putative sugar diacid recognition B5S57_17455 PF17853 GGDEF-like domain B5S57_17455 PF13556 PucR C-terminal helix-turn-helix domain B5S57_17460 PF02447 GntP family permease B5S57_17465 PF02595 Glycerate kinase family B5S57_17470 PF00330 Aconitase family (aconitate hydratase) B5S57_17470 PF06434 Aconitate hydratase 2 N-terminus B5S57_17470 PF11791 Aconitate B N-terminal domain B5S57_17475 PF01734 Patatin-like phospholipase B5S57_17480 PF00912 Transglycosylase B5S57_17480 PF00905 Penicillin binding protein transpeptidase domain B5S57_17480 PF14814 Bifunctional transglycosylase second domain B5S57_17485 PF08482 ATP-dependent helicase C-terminal B5S57_17485 PF00271 Helicase conserved C-terminal domain B5S57_17485 PF04408 Helicase associated domain (HA2) B5S57_17485 PF00270 DEAD/DEAH box helicase B5S57_17490 PF17746 SfsA N-terminal OB domain B5S57_17490 PF03749 Sugar fermentation stimulation protein RE domain B5S57_17495 PF01258 Prokaryotic dksA/traR C4-type zinc finger B5S57_17500 PF00749 tRNA synthetases class I (E and Q), catalytic domain B5S57_17505 PF12626 Polymerase A arginine-rich C-terminus B5S57_17505 PF01743 Poly A polymerase head domain B5S57_17505 PF12627 Probable RNA and SrmB- binding site of polymerase A B5S57_17510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B5S57_17515 PF02548 Ketopantoate hydroxymethyltransferase B5S57_17520 PF02569 Pantoate-beta-alanine ligase B5S57_17530 PF01061 ABC-2 type transporter B5S57_17535 PF00005 ABC transporter B5S57_17540 PF01740 STAS domain B5S57_17540 PF00916 Sulfate permease family B5S57_17545 PF00484 Carbonic anhydrase B5S57_17550 PF00156 Phosphoribosyl transferase domain B5S57_17555 PF00440 Bacterial regulatory proteins, tetR family B5S57_17560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B5S57_17560 PF07992 Pyridine nucleotide-disulphide oxidoreductase B5S57_17565 PF00364 Biotin-requiring enzyme B5S57_17565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B5S57_17565 PF02817 e3 binding domain B5S57_17570 PF00456 Transketolase, thiamine diphosphate binding domain B5S57_17570 PF17831 Pyruvate dehydrogenase E1 component middle domain B5S57_17575 PF00392 Bacterial regulatory proteins, gntR family B5S57_17575 PF07729 FCD domain B5S57_17580 PF17768 RecJ OB domain B5S57_17580 PF02272 DHHA1 domain B5S57_17580 PF01368 DHH family B5S57_17585 PF13098 Thioredoxin-like domain B5S57_17585 PF10411 Disulfide bond isomerase protein N-terminus B5S57_17590 PF02899 Phage integrase, N-terminal SAM-like domain B5S57_17590 PF00589 Phage integrase family B5S57_17595 PF00258 Flavodoxin B5S57_17600 PF01510 N-acetylmuramoyl-L-alanine amidase B5S57_17605 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain B5S57_17605 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain B5S57_17615 PF00437 Type II/IV secretion system protein B5S57_17615 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B5S57_17620 PF00482 Type II secretion system (T2SS), protein F B5S57_17625 PF06750 Bacterial Peptidase A24 N-terminal domain B5S57_17625 PF01478 Type IV leader peptidase family B5S57_17630 PF01121 Dephospho-CoA kinase B5S57_17635 PF07072 Cell division protein B5S57_17640 PF03884 DNA gyrase inhibitor YacG B5S57_17645 PF01245 Ribosomal protein L19 B5S57_17650 PF01746 tRNA (Guanine-1)-methyltransferase B5S57_17665 PF00448 SRP54-type protein, GTPase domain B5S57_17665 PF02978 Signal peptide binding domain B5S57_17665 PF02881 SRP54-type protein, helical bundle domain B5S57_17670 PF01578 Cytochrome C assembly protein B5S57_17675 PF01595 Cyclin M transmembrane N-terminal domain B5S57_17675 PF03471 Transporter associated domain B5S57_17675 PF00571 CBS domain B5S57_17685 PF04262 Glutamate-cysteine ligase B5S57_17690 PF00675 Insulinase (Peptidase family M16) B5S57_17690 PF05193 Peptidase M16 inactive domain B5S57_17695 PF09335 SNARE associated Golgi protein B5S57_17700 PF00107 Zinc-binding dehydrogenase B5S57_17700 PF08240 Alcohol dehydrogenase GroES-like domain B5S57_17705 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit B5S57_17710 PF02436 Conserved carboxylase domain B5S57_17710 PF00682 HMGL-like B5S57_17710 PF00364 Biotin-requiring enzyme B5S57_17715 PF04277 Oxaloacetate decarboxylase, gamma chain B5S57_17760 PF13840 ACT domain B5S57_17760 PF01842 ACT domain B5S57_17760 PF00696 Amino acid kinase family B5S57_17765 PF02272 DHHA1 domain B5S57_17765 PF01411 tRNA synthetases class II (A) B5S57_17765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B5S57_17770 PF02631 RecX family B5S57_17775 PF00154 recA bacterial DNA recombination protein B5S57_17780 PF02464 Competence-damaged protein B5S57_17785 PF00005 ABC transporter B5S57_17785 PF12857 TOBE-like domain B5S57_17790 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_17795 PF00528 Binding-protein-dependent transport system inner membrane component B5S57_17805 PF00291 Pyridoxal-phosphate dependent enzyme B5S57_17810 PF01624 MutS domain I B5S57_17810 PF05190 MutS family domain IV B5S57_17810 PF05188 MutS domain II B5S57_17810 PF00488 MutS domain V B5S57_17810 PF05192 MutS domain III B5S57_17815 PF04542 Sigma-70 region 2 B5S57_17815 PF00140 Sigma-70 factor, region 1.2 B5S57_17815 PF04545 Sigma-70, region 4 B5S57_17815 PF04539 Sigma-70 region 3 B5S57_17820 PF01551 Peptidase family M23 B5S57_17820 PF01476 LysM domain B5S57_17830 PF01975 Survival protein SurE B5S57_17835 PF01142 tRNA pseudouridine synthase D (TruD) B5S57_17840 PF02542 YgbB family B5S57_17845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase B5S57_17850 PF04977 Septum formation initiator B5S57_17855 PF02673 Bacitracin resistance protein BacA B5S57_17860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B5S57_17865 PF02152 Dihydroneopterin aldolase B5S57_17870 PF02660 Glycerol-3-phosphate acyltransferase B5S57_17890 PF09424 Yqey-like protein B5S57_17895 PF08275 DNA primase catalytic core, N-terminal domain B5S57_17895 PF10410 DnaB-helicase binding domain of primase B5S57_17895 PF01807 CHC2 zinc finger B5S57_17895 PF08278 DNA primase DnaG DnaB-binding B5S57_17900 PF04546 Sigma-70, non-essential region B5S57_17900 PF04542 Sigma-70 region 2 B5S57_17900 PF00140 Sigma-70 factor, region 1.2 B5S57_17900 PF04539 Sigma-70 region 3 B5S57_17900 PF04545 Sigma-70, region 4 B5S57_17900 PF03979 Sigma-70 factor, region 1.1 B5S57_17915 PF07804 HipA-like C-terminal domain B5S57_17915 PF13657 HipA N-terminal domain B5S57_17935 PF13361 UvrD-like helicase C-terminal domain B5S57_17935 PF00580 UvrD/REP helicase N-terminal domain B5S57_17955 PF01420 Type I restriction modification DNA specificity domain B5S57_17970 PF02796 Helix-turn-helix domain of resolvase B5S57_17970 PF00239 Resolvase, N terminal domain B5S57_18005 PF00665 Integrase core domain B5S57_18010 PF01695 IstB-like ATP binding protein B5S57_18050 PF00589 Phage integrase family B5S57_18050 PF02899 Phage integrase, N-terminal SAM-like domain B5S57_18055 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA B5S57_18060 PF15935 RNase LS, bacterial toxin B5S57_18135 PF13005 zinc-finger binding domain of transposase IS66 B5S57_18135 PF13007 Transposase C of IS166 homeodomain B5S57_18135 PF03050 Transposase IS66 family B5S57_18135 PF13817 IS66 C-terminal element B5S57_18185 PF16671 Actin cross-linking domain B5S57_18185 PF04717 Type VI secretion system, phage-baseplate injector B5S57_18190 PF05638 Type VI secretion system effector, Hcp B5S57_18195 PF00472 RF-1 domain B5S57_18205 PF11999 Protein of unknown function (DUF3494) B5S57_18205 PF02368 Bacterial Ig-like domain (group 2) B5S57_18210 PF01380 SIS domain B5S57_18215 PF00455 DeoR C terminal sensor domain B5S57_18215 PF08220 DeoR-like helix-turn-helix domain B5S57_18220 PF02887 Pyruvate kinase, alpha/beta domain B5S57_18220 PF00224 Pyruvate kinase, barrel domain B5S57_18225 PF00990 Diguanylate cyclase, GGDEF domain B5S57_18225 PF17158 Membrane-associated sensor, integral membrane domain B5S57_18235 PF03466 LysR substrate binding domain B5S57_18235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_18240 PF01810 LysE type translocator B5S57_18245 PF05552 Conserved TM helix B5S57_18245 PF00924 Mechanosensitive ion channel B5S57_18250 PF01116 Fructose-bisphosphate aldolase class-II B5S57_18260 PF00162 Phosphoglycerate kinase B5S57_18265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_18265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B5S57_18270 PF07715 TonB-dependent Receptor Plug Domain B5S57_18270 PF00593 TonB dependent receptor B5S57_18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_18275 PF03466 LysR substrate binding domain B5S57_18280 PF00456 Transketolase, thiamine diphosphate binding domain B5S57_18280 PF02780 Transketolase, C-terminal domain B5S57_18280 PF02779 Transketolase, pyrimidine binding domain B5S57_18285 PF02772 S-adenosylmethionine synthetase, central domain B5S57_18285 PF00438 S-adenosylmethionine synthetase, N-terminal domain B5S57_18285 PF02773 S-adenosylmethionine synthetase, C-terminal domain B5S57_18290 PF17283 SprT-like zinc ribbon domain B5S57_18290 PF10263 SprT-like family B5S57_18295 PF04231 Endonuclease I B5S57_18300 PF04452 RNA methyltransferase B5S57_18305 PF02951 Prokaryotic glutathione synthetase, N-terminal domain B5S57_18305 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain B5S57_18310 PF02622 Uncharacterized ACR, COG1678 B5S57_18315 PF03652 Holliday junction resolvase B5S57_18320 PF00437 Type II/IV secretion system protein B5S57_18325 PF00437 Type II/IV secretion system protein B5S57_18330 PF01168 Alanine racemase, N-terminal domain B5S57_18335 PF14748 Pyrroline-5-carboxylate reductase dimerisation B5S57_18335 PF03807 NADP oxidoreductase coenzyme F420-dependent B5S57_18340 PF02325 YGGT family B5S57_18345 PF02594 Uncharacterised ACR, YggU family COG1872 B5S57_18355 PF01725 Ham1 family B5S57_18360 PF06969 HemN C-terminal domain B5S57_18360 PF04055 Radical SAM superfamily B5S57_18365 PF04960 Glutaminase B5S57_18370 PF02390 Putative methyltransferase B5S57_18375 PF00633 Helix-hairpin-helix motif B5S57_18375 PF00730 HhH-GPD superfamily base excision DNA repair protein B5S57_18375 PF14815 NUDIX domain B5S57_18380 PF04362 Bacterial Fe(2+) trafficking B5S57_18385 PF01464 Transglycosylase SLT domain B5S57_18385 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain B5S57_18435 PF00226 DnaJ domain B5S57_18435 PF05099 Tellurite resistance protein TerB B5S57_18440 PF04453 LPS transport system D B5S57_18440 PF03968 OstA-like protein B5S57_18445 PF09312 SurA N-terminal domain B5S57_18450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA B5S57_18455 PF00398 Ribosomal RNA adenine dimethylase B5S57_18460 PF04379 ApaG domain B5S57_18465 PF00149 Calcineurin-like phosphoesterase B5S57_18470 PF00186 Dihydrofolate reductase B5S57_18475 PF12821 Threonine/Serine exporter, ThrE B5S57_18480 PF06738 Putative threonine/serine exporter B5S57_18485 PF01018 GTP1/OBG B5S57_18485 PF01926 50S ribosome-binding GTPase B5S57_18490 PF01016 Ribosomal L27 protein B5S57_18505 PF00348 Polyprenyl synthetase B5S57_18510 PF13520 Amino acid permease B5S57_18515 PF00056 lactate/malate dehydrogenase, NAD binding domain B5S57_18515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain B5S57_18530 PF16868 NMT1-like family B5S57_18540 PF00582 Universal stress protein family B5S57_18555 PF06877 Regulator of ribonuclease activity B B5S57_18565 PF01523 Putative modulator of DNA gyrase B5S57_18570 PF00795 Carbon-nitrogen hydrolase B5S57_18575 PF13116 Protein of unknown function B5S57_18575 PF13502 AsmA-like C-terminal region B5S57_18580 PF10150 Ribonuclease E/G family B5S57_18580 PF00575 S1 RNA binding domain B5S57_18585 PF02545 Maf-like protein B5S57_18590 PF04093 rod shape-determining protein MreD B5S57_18595 PF04085 rod shape-determining protein MreC B5S57_18635 PF07963 Prokaryotic N-terminal methylation motif B5S57_18635 PF00114 Pilin (bacterial filament) B5S57_18645 PF00482 Type II secretion system (T2SS), protein F B5S57_18650 PF00437 Type II/IV secretion system protein B5S57_18650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B5S57_18660 PF13401 AAA domain B5S57_18660 PF01471 Putative peptidoglycan binding domain B5S57_18665 PF00263 Bacterial type II and III secretion system protein B5S57_18665 PF03958 Bacterial type II/III secretion system short domain B5S57_18685 PF00990 Diguanylate cyclase, GGDEF domain B5S57_18685 PF17157 Gammaproteobacterial periplasmic sensor domain B5S57_18685 PF00563 EAL domain B5S57_18690 PF00436 Single-strand binding protein family B5S57_18695 PF00196 Bacterial regulatory proteins, luxR family B5S57_18700 PF00483 Nucleotidyl transferase B5S57_18705 PF00005 ABC transporter B5S57_18705 PF17755 UvrA DNA-binding domain B5S57_18705 PF17760 UvrA interaction domain B5S57_18715 PF03448 MgtE intracellular N domain B5S57_18715 PF01769 Divalent cation transporter B5S57_18715 PF00571 CBS domain B5S57_18730 PF00266 Aminotransferase class-V B5S57_18735 PF01842 ACT domain B5S57_18735 PF00696 Amino acid kinase family B5S57_18740 PF02607 B12 binding domain B5S57_18740 PF02574 Homocysteine S-methyltransferase B5S57_18740 PF02310 B12 binding domain B5S57_18740 PF02965 Vitamin B12 dependent methionine synthase, activation domain B5S57_18740 PF00809 Pterin binding enzyme B5S57_18745 PF00999 Sodium/hydrogen exchanger family B5S57_18815 PF01507 Phosphoadenosine phosphosulfate reductase family B5S57_18820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B5S57_18820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B5S57_18825 PF00258 Flavodoxin B5S57_18825 PF00667 FAD binding domain B5S57_18825 PF00175 Oxidoreductase NAD-binding domain B5S57_18845 PF01207 Dihydrouridine synthase (Dus) B5S57_18850 PF01475 Ferric uptake regulator family B5S57_18870 PF03050 Transposase IS66 family B5S57_18870 PF13005 zinc-finger binding domain of transposase IS66 B5S57_18870 PF13007 Transposase C of IS166 homeodomain B5S57_18870 PF13817 IS66 C-terminal element B5S57_18875 PF00342 Phosphoglucose isomerase B5S57_18880 PF00842 Alanine racemase, C-terminal domain B5S57_18880 PF01168 Alanine racemase, N-terminal domain B5S57_18885 PF00772 DnaB-like helicase N terminal domain B5S57_18885 PF03796 DnaB-like helicase C terminal domain B5S57_18895 PF01281 Ribosomal protein L9, N-terminal domain B5S57_18895 PF03948 Ribosomal protein L9, C-terminal domain B5S57_18900 PF01084 Ribosomal protein S18 B5S57_18905 PF00436 Single-strand binding protein family B5S57_18910 PF01250 Ribosomal protein S6 B5S57_18915 PF03143 Elongation factor Tu C-terminal domain B5S57_18915 PF03144 Elongation factor Tu domain 2 B5S57_18915 PF00009 Elongation factor Tu GTP binding domain B5S57_18920 PF14492 Elongation Factor G, domain II B5S57_18920 PF03144 Elongation factor Tu domain 2 B5S57_18920 PF00679 Elongation factor G C-terminus B5S57_18920 PF00009 Elongation factor Tu GTP binding domain B5S57_18920 PF03764 Elongation factor G, domain IV B5S57_18925 PF00177 Ribosomal protein S7p/S5e B5S57_18930 PF00164 Ribosomal protein S12/S23 B5S57_18935 PF04077 DsrH like protein B5S57_18940 PF02635 DsrE/DsrF-like family B5S57_18945 PF02635 DsrE/DsrF-like family B5S57_18950 PF13309 HTH domain B5S57_18950 PF08348 YheO-like PAS domain B5S57_18955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B5S57_18955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B5S57_18965 PF04102 SlyX B5S57_18970 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) B5S57_18975 PF01145 SPFH domain / Band 7 family B5S57_18980 PF01145 SPFH domain / Band 7 family B5S57_18980 PF12221 Bacterial membrane protein N terminal B5S57_18985 PF01926 50S ribosome-binding GTPase B5S57_18985 PF13167 GTP-binding GTPase N-terminal B5S57_18985 PF16360 GTP-binding GTPase Middle Region B5S57_18990 PF17209 Hfq protein B5S57_19000 PF01119 DNA mismatch repair protein, C-terminal domain B5S57_19000 PF08676 MutL C terminal dimerisation domain B5S57_19005 PF01520 N-acetylmuramoyl-L-alanine amidase B5S57_19010 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE B5S57_19015 PF08331 Domain of unknown function (DUF1730) B5S57_19065 PF00929 Exonuclease B5S57_19070 PF03193 RsgA GTPase B5S57_19075 PF02666 Phosphatidylserine decarboxylase B5S57_19080 PF03600 Citrate transporter B5S57_19080 PF02080 TrkA-C domain B5S57_19085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain B5S57_19085 PF00672 HAMP domain B5S57_19085 PF02743 Cache domain B5S57_19095 PF01676 Metalloenzyme superfamily B5S57_19095 PF06415 BPG-independent PGAM N-terminus (iPGM_N) B5S57_19100 PF01551 Peptidase family M23 B5S57_19110 PF08360 QacR-like protein, C-terminal region B5S57_19110 PF00440 Bacterial regulatory proteins, tetR family B5S57_19115 PF01208 Uroporphyrinogen decarboxylase (URO-D) B5S57_19120 PF09297 NADH pyrophosphatase zinc ribbon domain B5S57_19120 PF00293 NUDIX domain B5S57_19125 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ B5S57_19130 PF04998 RNA polymerase Rpb1, domain 5 B5S57_19130 PF05000 RNA polymerase Rpb1, domain 4 B5S57_19130 PF00623 RNA polymerase Rpb1, domain 2 B5S57_19130 PF04983 RNA polymerase Rpb1, domain 3 B5S57_19130 PF04997 RNA polymerase Rpb1, domain 1 B5S57_19135 PF04561 RNA polymerase Rpb2, domain 2 B5S57_19135 PF04563 RNA polymerase beta subunit B5S57_19135 PF10385 RNA polymerase beta subunit external 1 domain B5S57_19135 PF00562 RNA polymerase Rpb2, domain 6 B5S57_19135 PF04560 RNA polymerase Rpb2, domain 7 B5S57_19135 PF04565 RNA polymerase Rpb2, domain 3 B5S57_19140 PF16320 Ribosomal protein L7/L12 dimerisation domain B5S57_19140 PF00542 Ribosomal protein L7/L12 C-terminal domain B5S57_19145 PF00466 Ribosomal protein L10 B5S57_19150 PF00687 Ribosomal protein L1p/L10e family B5S57_19155 PF00298 Ribosomal protein L11, RNA binding domain B5S57_19155 PF03946 Ribosomal protein L11, N-terminal domain B5S57_19160 PF02357 Transcription termination factor nusG B5S57_19160 PF00467 KOW motif B5S57_19165 PF00584 SecE/Sec61-gamma subunits of protein translocation complex B5S57_19170 PF03143 Elongation factor Tu C-terminal domain B5S57_19170 PF00009 Elongation factor Tu GTP binding domain B5S57_19170 PF03144 Elongation factor Tu domain 2 B5S57_19195 PF00485 Phosphoribulokinase / Uridine kinase family B5S57_19200 PF08279 HTH domain B5S57_19200 PF03099 Biotin/lipoate A/B protein ligase family B5S57_19200 PF02237 Biotin protein ligase C terminal domain B5S57_19205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain B5S57_19205 PF01565 FAD binding domain B5S57_19215 PF13091 PLD-like domain B5S57_19250 PF00175 Oxidoreductase NAD-binding domain B5S57_19255 PF00175 Oxidoreductase NAD-binding domain B5S57_19255 PF00111 2Fe-2S iron-sulfur cluster binding domain B5S57_19255 PF00970 Oxidoreductase FAD-binding domain B5S57_19260 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase B5S57_19270 PF07498 Rho termination factor, N-terminal domain B5S57_19270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B5S57_19270 PF07497 Rho termination factor, RNA-binding domain B5S57_19275 PF00085 Thioredoxin B5S57_19280 PF00271 Helicase conserved C-terminal domain B5S57_19280 PF00270 DEAD/DEAH box helicase B5S57_19285 PF02541 Ppx/GppA phosphatase family B5S57_19290 PF02592 Putative vitamin uptake transporter B5S57_19295 PF00625 Guanylate kinase B5S57_19300 PF01192 RNA polymerase Rpb6 B5S57_19305 PF04607 Region found in RelA / SpoT proteins B5S57_19305 PF13291 ACT domain B5S57_19305 PF02824 TGS domain B5S57_19310 PF00270 DEAD/DEAH box helicase B5S57_19310 PF00271 Helicase conserved C-terminal domain B5S57_19310 PF17191 RecG wedge domain B5S57_19315 PF00860 Permease family B5S57_19320 PF00512 His Kinase A (phospho-acceptor) domain B5S57_19320 PF00672 HAMP domain B5S57_19320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_19325 PF00486 Transcriptional regulatory protein, C terminal B5S57_19325 PF00072 Response regulator receiver domain B5S57_19330 PF06483 Chitinase C B5S57_19330 PF00704 Glycosyl hydrolases family 18 B5S57_19340 PF00881 Nitroreductase family B5S57_19350 PF03466 LysR substrate binding domain B5S57_19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B5S57_19360 PF06942 GlpM protein B5S57_19370 PF01272 Transcription elongation factor, GreA/GreB, C-term B5S57_19370 PF03449 Transcription elongation factor, N-terminal B5S57_19375 PF09371 Tex-like protein N-terminal domain B5S57_19375 PF16921 Tex protein YqgF-like domain B5S57_19375 PF17674 HHH domain B5S57_19375 PF00575 S1 RNA binding domain B5S57_19385 PF00561 alpha/beta hydrolase fold B5S57_19390 PF00156 Phosphoribosyl transferase domain B5S57_19395 PF01106 NifU-like domain B5S57_19395 PF01521 Iron-sulphur cluster biosynthesis B5S57_19400 PF00293 NUDIX domain B5S57_19405 PF00459 Inositol monophosphatase family B5S57_19415 PF04612 Type II secretion system (T2SS), protein M B5S57_19420 PF05134 Type II secretion system (T2SS), protein L B5S57_19420 PF12693 GspL periplasmic domain B5S57_19425 PF03934 Type II secretion system (T2SS), protein K B5S57_19430 PF07963 Prokaryotic N-terminal methylation motif B5S57_19430 PF11612 Type II secretion system (T2SS), protein J B5S57_19435 PF07963 Prokaryotic N-terminal methylation motif B5S57_19435 PF02501 Type II secretion system (T2SS), protein I B5S57_19440 PF12019 Type II transport protein GspH B5S57_19445 PF07963 Prokaryotic N-terminal methylation motif B5S57_19445 PF08334 Type II secretion system (T2SS), protein G B5S57_19450 PF00482 Type II secretion system (T2SS), protein F B5S57_19455 PF00437 Type II/IV secretion system protein B5S57_19460 PF00263 Bacterial type II and III secretion system protein B5S57_19460 PF03958 Bacterial type II/III secretion system short domain B5S57_19465 PF11356 Type II secretion system protein C B5S57_19470 PF01479 S4 domain B5S57_19475 PF01430 Hsp33 protein B5S57_19480 PF01293 Phosphoenolpyruvate carboxykinase B5S57_19490 PF09500 Putative thioesterase (yiiD_Cterm) B5S57_19490 PF00583 Acetyltransferase (GNAT) family B5S57_19495 PF02580 D-Tyr-tRNA(Tyr) deacylase B5S57_19500 PF03631 Virulence factor BrkB B5S57_19510 PF00120 Glutamine synthetase, catalytic domain B5S57_19510 PF03951 Glutamine synthetase, beta-Grasp domain B5S57_19520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B5S57_19520 PF00989 PAS fold B5S57_19520 PF00512 His Kinase A (phospho-acceptor) domain B5S57_19525 PF00158 Sigma-54 interaction domain B5S57_19525 PF02954 Bacterial regulatory protein, Fis family B5S57_19525 PF00072 Response regulator receiver domain B5S57_19530 PF00563 EAL domain B5S57_19530 PF00990 Diguanylate cyclase, GGDEF domain B5S57_19530 PF03707 Bacterial signalling protein N terminal repeat B5S57_19530 PF13188 PAS domain B5S57_19535 PF00962 Adenosine/AMP deaminase B5S57_19610 PF01177 Asp/Glu/Hydantoin racemase B5S57_19620 PF07715 TonB-dependent Receptor Plug Domain B5S57_19620 PF00593 TonB dependent receptor B5S57_19645 PF01381 Helix-turn-helix B5S57_19655 PF07804 HipA-like C-terminal domain B5S57_19655 PF13657 HipA N-terminal domain B5S57_19695 PF02796 Helix-turn-helix domain of resolvase B5S57_19695 PF00239 Resolvase, N terminal domain B5S57_19720 PF05958 tRNA (Uracil-5-)-methyltransferase B5S57_19730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain B5S57_19730 PF02837 Glycosyl hydrolases family 2, sugar binding domain B5S57_19730 PF16353 Domain of unknown function(DUF4981) B5S57_19730 PF00703 Glycosyl hydrolases family 2 B5S57_19730 PF02929 Beta galactosidase small chain B5S57_19735 PF07226 Protein of unknown function (DUF1422) B5S57_19740 PF00440 Bacterial regulatory proteins, tetR family B5S57_19750 PF01554 MatE B5S57_19760 PF00717 Peptidase S24-like B5S57_19760 PF01726 LexA DNA binding domain B5S57_19765 PF01553 Acyltransferase B5S57_19770 PF01040 UbiA prenyltransferase family B5S57_19775 PF04345 Chorismate lyase B5S57_19780 PF03748 Flagellar basal body-associated protein FliL B5S57_19785 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease B5S57_19785 PF01694 Rhomboid family B5S57_19790 PF00581 Rhodanese-like domain B5S57_19795 PF04545 Sigma-70, region 4 B5S57_19795 PF04542 Sigma-70 region 2 B5S57_19795 PF00140 Sigma-70 factor, region 1.2 B5S57_19800 PF18075 FtsX extracellular domain B5S57_19805 PF00005 ABC transporter B5S57_19810 PF02881 SRP54-type protein, helical bundle domain B5S57_19810 PF00448 SRP54-type protein, GTPase domain B5S57_19825 PF01914 MarC family integral membrane protein B5S57_19835 PF13737 Transposase DDE domain B5S57_19860 PF03050 Transposase IS66 family B5S57_19860 PF13817 IS66 C-terminal element B5S57_19860 PF13007 Transposase C of IS166 homeodomain B5S57_19860 PF13005 zinc-finger binding domain of transposase IS66 B5S57_19870 PF01914 MarC family integral membrane protein B5S57_19895 PF00210 Ferritin-like domain B5S57_19900 PF00563 EAL domain B5S57_19900 PF08668 HDOD domain B5S57_19905 PF01810 LysE type translocator B5S57_19910 PF12146 Serine aminopeptidase, S33 B5S57_19930 PF13419 Haloacid dehalogenase-like hydrolase B5S57_19935 PF02899 Phage integrase, N-terminal SAM-like domain B5S57_19935 PF00589 Phage integrase family B5S57_19945 PF01678 Diaminopimelate epimerase B5S57_19950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B5S57_19950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B5S57_19960 PF01491 Frataxin-like domain B5S57_19965 PF01295 Adenylate cyclase, class-I B5S57_19965 PF12633 Adenylate cyclase NT domain B5S57_19970 PF03900 Porphobilinogen deaminase, C-terminal domain B5S57_19970 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain B5S57_19975 PF02602 Uroporphyrinogen-III synthase HemD B5S57_19980 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase B5S57_19985 PF07219 HemY protein N-terminus B5S57_20020 PF00132 Bacterial transferase hexapeptide (six repeats) B5S57_20025 PF07369 Protein of unknown function (DUF1488) B5S57_20030 PF08501 Shikimate dehydrogenase substrate binding domain B5S57_20030 PF01488 Shikimate / quinate 5-dehydrogenase B5S57_20030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain B5S57_20035 PF01218 Coproporphyrinogen III oxidase B5S57_20040 PF01300 Telomere recombination B5S57_20045 PF00731 AIR carboxylase B5S57_20050 PF02222 ATP-grasp domain B5S57_20050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain B5S57_20055 PF01396 Topoisomerase DNA binding C4 zinc finger B5S57_20080 PF00578 AhpC/TSA family B5S57_20125 PF00580 UvrD/REP helicase N-terminal domain B5S57_20125 PF13361 UvrD-like helicase C-terminal domain B5S57_20155 PF04361 Protein of unknown function (DUF494) B5S57_20160 PF02481 DNA recombination-mediator protein A B5S57_20160 PF17782 DprA winged helix domain B5S57_20165 PF01476 LysM domain B5S57_20170 PF01327 Polypeptide deformylase B5S57_20175 PF00551 Formyl transferase B5S57_20175 PF02911 Formyl transferase, C-terminal domain B5S57_20180 PF01029 NusB family B5S57_20180 PF01189 16S rRNA methyltransferase RsmB/F B5S57_20185 PF02254 TrkA-N domain B5S57_20185 PF02080 TrkA-C domain B5S57_20190 PF02386 Cation transport protein B5S57_20200 PF03006 Haemolysin-III related B5S57_20205 PF06288 Protein of unknown function (DUF1040) B5S57_20215 PF13746 4Fe-4S dicluster domain B5S57_20215 PF12801 4Fe-4S binding domain B5S57_20215 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase B5S57_20220 PF01636 Phosphotransferase enzyme family B5S57_20225 PF01323 DSBA-like thioredoxin domain B5S57_20235 PF01078 Magnesium chelatase, subunit ChlI B5S57_20235 PF13335 Magnesium chelatase, subunit ChlI C-terminal