B5S57_00075 SM00470 ParB-like nuclease domain B5S57_00135 SM00382 ATPases associated with a variety of cellular activities B5S57_00140 SM00382 ATPases associated with a variety of cellular activities B5S57_00230 SM00857 Resolvase, N terminal domain B5S57_00480 SM00422 helix_turn_helix, mercury resistance B5S57_00485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_00485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_00560 SM00530 Helix-turn-helix XRE-family like proteins B5S57_00570 SM00020 Trypsin-like serine protease B5S57_00610 SM00354 helix_turn _helix lactose operon repressor B5S57_00625 SM00387 Histidine kinase-like ATPases B5S57_00625 SM00448 cheY-homologous receiver domain B5S57_00650 SM00382 ATPases associated with a variety of cellular activities B5S57_00730 SM00420 helix_turn_helix, Deoxyribose operon repressor B5S57_00730 SM01134 B5S57_00730 B5S57_00750 SM00382 ATPases associated with a variety of cellular activities B5S57_00785 SM00642 Alpha-amylase domain B5S57_00830 SM00926 Molybdopterin oxidoreductase Fe4S4 domain B5S57_00845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_00845 SM00387 Histidine kinase-like ATPases B5S57_00850 SM00421 helix_turn_helix, Lux Regulon B5S57_00850 SM00448 cheY-homologous receiver domain B5S57_00890 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_00890 SM00357 Cold shock protein domain B5S57_00890 SM00955 B5S57_00890 B5S57_00895 SM00487 DEAD-like helicases superfamily B5S57_00895 SM00490 helicase superfamily c-terminal domain B5S57_00900 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B5S57_01245 SM00360 RNA recognition motif B5S57_01325 SM00479 B5S57_01325 B5S57_01340 SM00530 Helix-turn-helix XRE-family like proteins B5S57_01350 SM00530 Helix-turn-helix XRE-family like proteins B5S57_01400 SM00881 CoA binding domain B5S57_01455 SM00448 cheY-homologous receiver domain B5S57_01455 SM00862 Transcriptional regulatory protein, C terminal B5S57_01460 SM00387 Histidine kinase-like ATPases B5S57_01460 SM00388 His Kinase A (phosphoacceptor) domain B5S57_01470 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B5S57_01470 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B5S57_01485 SM00267 diguanylate cyclase B5S57_01490 SM00357 Cold shock protein domain B5S57_01500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_01500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_01540 SM00382 ATPases associated with a variety of cellular activities B5S57_01565 SM00782 PhnA Zinc-Ribbon B5S57_01635 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_01635 SM00267 diguanylate cyclase B5S57_01660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B5S57_01675 SM00450 Rhodanese Homology Domain B5S57_01685 SM00422 helix_turn_helix, mercury resistance B5S57_01940 SM00857 Resolvase, N terminal domain B5S57_01950 SM00448 cheY-homologous receiver domain B5S57_01955 SM00052 Putative diguanylate phosphodiesterase B5S57_01955 SM00267 diguanylate cyclase B5S57_01955 SM00448 cheY-homologous receiver domain B5S57_01960 SM00387 Histidine kinase-like ATPases B5S57_01960 SM00388 His Kinase A (phosphoacceptor) domain B5S57_01965 SM00387 Histidine kinase-like ATPases B5S57_01975 SM00448 cheY-homologous receiver domain B5S57_01980 SM00448 cheY-homologous receiver domain B5S57_01990 SM00267 diguanylate cyclase B5S57_01990 SM00448 cheY-homologous receiver domain B5S57_02000 SM00382 ATPases associated with a variety of cellular activities B5S57_02030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B5S57_02030 SM00267 diguanylate cyclase B5S57_02040 SM00495 Chitin-binding domain type 3 B5S57_02040 SM00636 B5S57_02040 B5S57_02045 SM00342 helix_turn_helix, arabinose operon control protein B5S57_02055 SM00448 cheY-homologous receiver domain B5S57_02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_02060 SM00387 Histidine kinase-like ATPases B5S57_02060 SM00388 His Kinase A (phosphoacceptor) domain B5S57_02085 SM00387 Histidine kinase-like ATPases B5S57_02085 SM00388 His Kinase A (phosphoacceptor) domain B5S57_02085 SM00448 cheY-homologous receiver domain B5S57_02095 SM00851 MGS-like domain B5S57_02135 SM00387 Histidine kinase-like ATPases B5S57_02135 SM00388 His Kinase A (phosphoacceptor) domain B5S57_02135 SM00448 cheY-homologous receiver domain B5S57_02280 SM00382 ATPases associated with a variety of cellular activities B5S57_02295 SM00327 von Willebrand factor (vWF) type A domain B5S57_02300 SM00382 ATPases associated with a variety of cellular activities B5S57_02320 SM00487 DEAD-like helicases superfamily B5S57_02320 SM00490 helicase superfamily c-terminal domain B5S57_02330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_02345 SM00796 Allophanate hydrolase subunit 1 B5S57_02350 SM00797 Allophanate hydrolase subunit 2 B5S57_02365 SM00382 ATPases associated with a variety of cellular activities B5S57_02380 SM00052 Putative diguanylate phosphodiesterase B5S57_02380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B5S57_02380 SM00267 diguanylate cyclase B5S57_02390 SM00271 DnaJ molecular chaperone homology domain B5S57_02445 SM00052 Putative diguanylate phosphodiesterase B5S57_02445 SM00267 diguanylate cyclase B5S57_02450 SM01057 Eukaryotic-type carbonic anhydrase B5S57_02460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_02460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_02475 SM00028 Tetratricopeptide repeats B5S57_02480 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_02480 SM00382 ATPases associated with a variety of cellular activities B5S57_02495 SM00347 helix_turn_helix multiple antibiotic resistance protein B5S57_02505 SM00924 MgtE intracellular N domain B5S57_02570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_02570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_02575 SM00642 Alpha-amylase domain B5S57_02590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_02590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_02610 SM00327 von Willebrand factor (vWF) type A domain B5S57_02615 SM00028 Tetratricopeptide repeats B5S57_02650 SM00507 HNH nucleases B5S57_02680 SM00487 DEAD-like helicases superfamily B5S57_02680 SM00490 helicase superfamily c-terminal domain B5S57_02815 SM00382 ATPases associated with a variety of cellular activities B5S57_02900 SM00530 Helix-turn-helix XRE-family like proteins B5S57_02935 SM00829 Enoylreductase B5S57_02965 SM00421 helix_turn_helix, Lux Regulon B5S57_02965 SM00448 cheY-homologous receiver domain B5S57_02970 SM00387 Histidine kinase-like ATPases B5S57_02985 SM00481 DNA polymerase alpha chain like domain B5S57_02990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_03010 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_03015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B5S57_03045 SM00387 Histidine kinase-like ATPases B5S57_03045 SM00388 His Kinase A (phosphoacceptor) domain B5S57_03045 SM00448 cheY-homologous receiver domain B5S57_03050 SM01240 B5S57_03050 B5S57_03065 SM00448 cheY-homologous receiver domain B5S57_03080 SM00357 Cold shock protein domain B5S57_03085 SM01322 B5S57_03085 B5S57_03095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B5S57_03095 SM00382 ATPases associated with a variety of cellular activities B5S57_03135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_03165 SM00382 ATPases associated with a variety of cellular activities B5S57_03185 SM00267 diguanylate cyclase B5S57_03185 SM01079 B5S57_03185 B5S57_03205 SM00267 diguanylate cyclase B5S57_03220 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_03240 SM00382 ATPases associated with a variety of cellular activities B5S57_03250 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_03250 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B5S57_03265 SM00342 helix_turn_helix, arabinose operon control protein B5S57_03315 SM00052 Putative diguanylate phosphodiesterase B5S57_03315 SM00267 diguanylate cyclase B5S57_03345 SM00267 diguanylate cyclase B5S57_03350 SM00382 ATPases associated with a variety of cellular activities B5S57_03375 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_03390 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. B5S57_03410 SM00495 Chitin-binding domain type 3 B5S57_03440 SM00822 B5S57_03440 B5S57_03450 SM00382 ATPases associated with a variety of cellular activities B5S57_03475 SM00342 helix_turn_helix, arabinose operon control protein B5S57_03510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03515 SM00354 helix_turn _helix lactose operon repressor B5S57_03525 SM00382 ATPases associated with a variety of cellular activities B5S57_03545 SM00354 helix_turn _helix lactose operon repressor B5S57_03565 SM00849 Metallo-beta-lactamase superfamily B5S57_03575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_03600 SM01350 B5S57_03600 B5S57_03610 SM00849 Metallo-beta-lactamase superfamily B5S57_03630 SM00354 helix_turn _helix lactose operon repressor B5S57_03650 SM00382 ATPases associated with a variety of cellular activities B5S57_03680 SM00642 Alpha-amylase domain B5S57_03695 SM00421 helix_turn_helix, Lux Regulon B5S57_03705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_03705 SM01049 B5S57_03705 B5S57_03715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03735 SM00344 helix_turn_helix ASNC type B5S57_03740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_03765 SM00342 helix_turn_helix, arabinose operon control protein B5S57_03780 SM00421 helix_turn_helix, Lux Regulon B5S57_03800 SM00052 Putative diguanylate phosphodiesterase B5S57_03800 SM00267 diguanylate cyclase B5S57_03805 SM00382 ATPases associated with a variety of cellular activities B5S57_03815 SM00331 Sigma factor PP2C-like phosphatases B5S57_03815 SM00448 cheY-homologous receiver domain B5S57_03825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03830 SM00448 cheY-homologous receiver domain B5S57_03840 SM00138 Methyltransferase, chemotaxis proteins B5S57_03845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_03845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_03850 SM00260 Two component signalling adaptor domain B5S57_03855 SM00260 Two component signalling adaptor domain B5S57_03870 SM00073 Histidine Phosphotransfer domain B5S57_03875 SM00448 cheY-homologous receiver domain B5S57_03905 SM00470 ParB-like nuclease domain B5S57_04015 SM00342 helix_turn_helix, arabinose operon control protein B5S57_04015 SM01009 AlkA N-terminal domain B5S57_04105 SM00347 helix_turn_helix multiple antibiotic resistance protein B5S57_04115 SM00052 Putative diguanylate phosphodiesterase B5S57_04125 SM00450 Rhodanese Homology Domain B5S57_04135 SM00382 ATPases associated with a variety of cellular activities B5S57_04150 SM00382 ATPases associated with a variety of cellular activities B5S57_04175 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_04175 SM00866 B5S57_04175 B5S57_04180 SM00487 DEAD-like helicases superfamily B5S57_04180 SM00490 helicase superfamily c-terminal domain B5S57_04215 SM00829 Enoylreductase B5S57_04235 SM00448 cheY-homologous receiver domain B5S57_04235 SM00862 Transcriptional regulatory protein, C terminal B5S57_04240 SM00387 Histidine kinase-like ATPases B5S57_04305 SM00382 ATPases associated with a variety of cellular activities B5S57_04305 SM01086 C-terminal, D2-small domain, of ClpB protein B5S57_04310 SM00382 ATPases associated with a variety of cellular activities B5S57_04400 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins B5S57_04400 SM00495 Chitin-binding domain type 3 B5S57_04400 SM00636 B5S57_04400 B5S57_04405 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_04410 SM00382 ATPases associated with a variety of cellular activities B5S57_04420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_04420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_04435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_04435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_04450 SM00014 Acid phosphatase homologues B5S57_04460 SM00382 ATPases associated with a variety of cellular activities B5S57_04470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B5S57_04470 SM00267 diguanylate cyclase B5S57_04485 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B5S57_04495 SM01007 Class II Aldolase and Adducin N-terminal domain B5S57_04510 SM00420 helix_turn_helix, Deoxyribose operon repressor B5S57_04510 SM01134 B5S57_04510 B5S57_04520 SM00642 Alpha-amylase domain B5S57_04550 SM00642 Alpha-amylase domain B5S57_04555 SM00671 Sel1-like repeats. B5S57_04620 SM00267 diguanylate cyclase B5S57_04625 SM00028 Tetratricopeptide repeats B5S57_04645 SM00422 helix_turn_helix, mercury resistance B5S57_04655 SM00257 Lysin motif B5S57_04665 SM00487 DEAD-like helicases superfamily B5S57_04665 SM00490 helicase superfamily c-terminal domain B5S57_04705 SM00642 Alpha-amylase domain B5S57_04720 SM00382 ATPases associated with a variety of cellular activities B5S57_04745 SM00448 cheY-homologous receiver domain B5S57_04745 SM00850 LytTr DNA-binding domain B5S57_04750 SM00052 Putative diguanylate phosphodiesterase B5S57_04770 SM00448 cheY-homologous receiver domain B5S57_04770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_04775 SM00073 Histidine Phosphotransfer domain B5S57_04775 SM00091 PAS domain B5S57_04775 SM00387 Histidine kinase-like ATPases B5S57_04775 SM00388 His Kinase A (phosphoacceptor) domain B5S57_04775 SM00448 cheY-homologous receiver domain B5S57_04780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_04780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_04805 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_04810 SM00387 Histidine kinase-like ATPases B5S57_04810 SM00388 His Kinase A (phosphoacceptor) domain B5S57_04810 SM00448 cheY-homologous receiver domain B5S57_04855 SM01266 B5S57_04855 B5S57_04900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_04900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_04910 SM00342 helix_turn_helix, arabinose operon control protein B5S57_04915 SM00448 cheY-homologous receiver domain B5S57_04920 SM00387 Histidine kinase-like ATPases B5S57_04950 SM00344 helix_turn_helix ASNC type B5S57_04960 SM00458 Ricin-type beta-trefoil B5S57_04975 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins B5S57_05025 SM00382 ATPases associated with a variety of cellular activities B5S57_05040 SM00421 helix_turn_helix, Lux Regulon B5S57_05045 SM00382 ATPases associated with a variety of cellular activities B5S57_05160 SM00382 ATPases associated with a variety of cellular activities B5S57_05165 SM00052 Putative diguanylate phosphodiesterase B5S57_05180 SM00867 YceI-like domain B5S57_05185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_05210 SM00861 Transketolase, pyrimidine binding domain B5S57_05225 SM00636 B5S57_05225 B5S57_05230 SM00450 Rhodanese Homology Domain B5S57_05240 SM00852 Probable molybdopterin binding domain B5S57_05290 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_05290 SM00866 B5S57_05290 B5S57_05310 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_05460 SM00487 DEAD-like helicases superfamily B5S57_05460 SM00491 B5S57_05460 B5S57_05570 SM00829 Enoylreductase B5S57_05625 SM00387 Histidine kinase-like ATPases B5S57_05625 SM00433 TopoisomeraseII B5S57_05635 SM00480 DNA polymerase III beta subunit B5S57_05640 SM00382 ATPases associated with a variety of cellular activities B5S57_05640 SM00760 Bacterial dnaA protein helix-turn-helix domain B5S57_05645 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_05655 SM00382 ATPases associated with a variety of cellular activities B5S57_05670 SM01234 B5S57_05670 B5S57_05690 SM01228 B5S57_05690 B5S57_05705 SM00470 ParB-like nuclease domain B5S57_05745 SM00382 ATPases associated with a variety of cellular activities B5S57_05865 SM00876 Biotin and Thiamin Synthesis associated domain B5S57_05895 SM00344 helix_turn_helix ASNC type B5S57_05950 SM00382 ATPases associated with a variety of cellular activities B5S57_05965 SM01007 Class II Aldolase and Adducin N-terminal domain B5S57_05980 SM00342 helix_turn_helix, arabinose operon control protein B5S57_06030 SM01004 Delta-aminolevulinic acid dehydratase B5S57_06035 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B5S57_06035 SM00474 3'-5' exonuclease B5S57_06035 SM00475 5'-3' exonuclease B5S57_06035 SM00482 DNA polymerase A domain B5S57_06065 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_06135 SM00382 ATPases associated with a variety of cellular activities B5S57_06165 SM00448 cheY-homologous receiver domain B5S57_06180 SM00530 Helix-turn-helix XRE-family like proteins B5S57_06190 SM00487 DEAD-like helicases superfamily B5S57_06325 SM00342 helix_turn_helix, arabinose operon control protein B5S57_06335 SM00341 Helicase and RNase D C-terminal B5S57_06335 SM00487 DEAD-like helicases superfamily B5S57_06335 SM00490 helicase superfamily c-terminal domain B5S57_06335 SM00956 B5S57_06335 B5S57_06365 SM00382 ATPases associated with a variety of cellular activities B5S57_06375 SM00382 ATPases associated with a variety of cellular activities B5S57_06405 SM00636 B5S57_06405 B5S57_06595 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain B5S57_06595 SM01232 B5S57_06595 B5S57_06705 SM00382 ATPases associated with a variety of cellular activities B5S57_06855 SM00226 Low molecular weight phosphatase family B5S57_06905 SM00984 UDP binding domain B5S57_06915 SM00849 Metallo-beta-lactamase superfamily B5S57_06915 SM01027 Beta-Casp domain B5S57_06920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_06920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_06950 SM00411 bacterial (prokaryotic) histone like domain B5S57_06960 SM01209 B5S57_06960 B5S57_06960 SM01210 B5S57_06960 B5S57_06965 SM00798 AICARFT/IMPCHase bienzyme B5S57_06965 SM00851 MGS-like domain B5S57_06970 SM00422 helix_turn_helix, mercury resistance B5S57_06995 SM00878 Biotin carboxylase C-terminal domain B5S57_07015 SM00479 B5S57_07015 B5S57_07030 SM00387 Histidine kinase-like ATPases B5S57_07030 SM00388 His Kinase A (phosphoacceptor) domain B5S57_07030 SM00448 cheY-homologous receiver domain B5S57_07045 SM01091 Transporter associated domain B5S57_07050 SM00421 helix_turn_helix, Lux Regulon B5S57_07050 SM00448 cheY-homologous receiver domain B5S57_07115 SM00357 Cold shock protein domain B5S57_07125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_07125 SM00387 Histidine kinase-like ATPases B5S57_07125 SM00388 His Kinase A (phosphoacceptor) domain B5S57_07130 SM00448 cheY-homologous receiver domain B5S57_07130 SM00862 Transcriptional regulatory protein, C terminal B5S57_07180 SM00919 Malic enzyme, NAD binding domain B5S57_07180 SM01274 B5S57_07180 B5S57_07190 SM00487 DEAD-like helicases superfamily B5S57_07190 SM00490 helicase superfamily c-terminal domain B5S57_07195 SM00354 helix_turn _helix lactose operon repressor B5S57_07210 SM00382 ATPases associated with a variety of cellular activities B5S57_07210 SM01086 C-terminal, D2-small domain, of ClpB protein B5S57_07255 SM00883 Chaperonin 10 Kd subunit B5S57_07280 SM00841 Elongation factor P, C-terminal B5S57_07280 SM01185 B5S57_07280 B5S57_07310 SM00450 Rhodanese Homology Domain B5S57_07325 SM00971 Serine acetyltransferase, N-terminal B5S57_07345 SM00859 Semialdehyde dehydrogenase, NAD binding domain B5S57_07410 SM00965 Secretin and TonB N terminus short domain B5S57_07500 SM01150 B5S57_07500 B5S57_07505 SM00100 Cyclic nucleotide-monophosphate binding domain B5S57_07505 SM00419 helix_turn_helix, cAMP Regulatory protein B5S57_07530 SM00382 ATPases associated with a variety of cellular activities B5S57_07560 SM00788 Adenylosuccinate synthetase B5S57_07570 SM00671 Sel1-like repeats. B5S57_07575 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_07575 SM00357 Cold shock protein domain B5S57_07575 SM00955 B5S57_07575 B5S57_07580 SM00967 RNA 2'-O ribose methyltransferase substrate binding B5S57_07585 SM01403 B5S57_07585 B5S57_07605 SM01382 B5S57_07605 B5S57_07605 SM01383 B5S57_07605 B5S57_07620 SM00322 K homology RNA-binding domain B5S57_07640 SM01374 B5S57_07640 B5S57_07645 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B5S57_07710 SM00363 S4 RNA-binding domain B5S57_07710 SM01390 B5S57_07710 B5S57_07715 SM00662 RNA polymerases D B5S57_07740 SM00487 DEAD-like helicases superfamily B5S57_07740 SM00490 helicase superfamily c-terminal domain B5S57_07745 SM00563 Phosphate acyltransferases B5S57_07820 SM00382 ATPases associated with a variety of cellular activities B5S57_07895 SM00382 ATPases associated with a variety of cellular activities B5S57_07910 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_07910 SM00924 MgtE intracellular N domain B5S57_07940 SM00382 ATPases associated with a variety of cellular activities B5S57_07960 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_07970 SM00382 ATPases associated with a variety of cellular activities B5S57_08005 SM00563 Phosphate acyltransferases B5S57_08010 SM00387 Histidine kinase-like ATPases B5S57_08015 SM00989 B5S57_08015 B5S57_08040 SM00670 Large family of predicted nucleotide-binding domains B5S57_08050 SM00487 DEAD-like helicases superfamily B5S57_08050 SM00490 helicase superfamily c-terminal domain B5S57_08105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_08160 SM01329 B5S57_08160 B5S57_08165 SM00917 LeuA allosteric (dimerisation) domain B5S57_08170 SM00014 Acid phosphatase homologues B5S57_08300 SM00358 Double-stranded RNA binding motif B5S57_08300 SM00535 Ribonuclease III family B5S57_08325 SM00073 Histidine Phosphotransfer domain B5S57_08325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_08325 SM00387 Histidine kinase-like ATPases B5S57_08325 SM00388 His Kinase A (phosphoacceptor) domain B5S57_08325 SM00448 cheY-homologous receiver domain B5S57_08335 SM00954 Region found in RelA / SpoT proteins B5S57_08350 SM01192 B5S57_08350 B5S57_08350 SM01193 B5S57_08350 B5S57_08360 SM00382 ATPases associated with a variety of cellular activities B5S57_08370 SM00287 Bacterial SH3 domain homologues B5S57_08385 SM00880 B5S57_08385 B5S57_08385 SM01118 B5S57_08385 B5S57_08395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_08435 SM00387 Histidine kinase-like ATPases B5S57_08435 SM00433 TopoisomeraseII B5S57_08440 SM00434 DNA Topoisomerase IV B5S57_08445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B5S57_08450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B5S57_08505 SM00749 bacterial OsmY and nodulation domain B5S57_08590 SM00842 Cell division protein FtsA B5S57_08595 SM00864 Tubulin/FtsZ family, GTPase domain B5S57_08595 SM00865 Tubulin/FtsZ family, C-terminal domain B5S57_08610 SM00957 SecA DEAD-like domain B5S57_08610 SM00958 SecA preprotein cross-linking domain B5S57_08625 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain B5S57_08630 SM00851 MGS-like domain B5S57_08630 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B5S57_08695 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_08700 SM00073 Histidine Phosphotransfer domain B5S57_08700 SM00091 PAS domain B5S57_08700 SM00387 Histidine kinase-like ATPases B5S57_08700 SM00388 His Kinase A (phosphoacceptor) domain B5S57_08700 SM00448 cheY-homologous receiver domain B5S57_08710 SM00448 cheY-homologous receiver domain B5S57_08710 SM00862 Transcriptional regulatory protein, C terminal B5S57_08745 SM00518 AP endonuclease family 2 B5S57_08750 SM00986 Uracil DNA glycosylase superfamily B5S57_08750 SM00987 UreE urease accessory protein, C-terminal domain B5S57_08785 SM01133 B5S57_08785 B5S57_08790 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain B5S57_08820 SM00382 ATPases associated with a variety of cellular activities B5S57_08825 SM00838 Elongation factor G C-terminus B5S57_08825 SM00889 Elongation factor G, domain IV B5S57_08870 SM00354 helix_turn _helix lactose operon repressor B5S57_08950 SM00925 MltA specific insert domain B5S57_08985 SM00464 Found in ATP-dependent protease La (LON) B5S57_09035 SM00900 B5S57_09035 B5S57_09125 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B5S57_09180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_09225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B5S57_09235 SM00935 Outer membrane protein (OmpH-like) B5S57_09265 SM00481 DNA polymerase alpha chain like domain B5S57_09275 SM00977 TilS substrate C-terminal domain B5S57_09285 SM00938 Nitrogen regulatory protein P-II B5S57_09300 SM00257 Lysin motif B5S57_09305 SM00849 Metallo-beta-lactamase superfamily B5S57_09320 SM00479 B5S57_09320 B5S57_09360 SM00363 S4 RNA-binding domain B5S57_09375 SM01081 Putative carbohydrate binding domain B5S57_09435 SM00858 B5S57_09435 B5S57_09440 SM00260 Two component signalling adaptor domain B5S57_09440 SM00448 cheY-homologous receiver domain B5S57_09445 SM00138 Methyltransferase, chemotaxis proteins B5S57_09490 SM00047 Lysozyme subfamily 2 B5S57_09600 SM01400 B5S57_09600 B5S57_09620 SM00937 B5S57_09620 B5S57_09695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_09695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_09770 SM00857 Resolvase, N terminal domain B5S57_09810 SM01130 B5S57_09810 B5S57_09900 SM00382 ATPases associated with a variety of cellular activities B5S57_09905 SM00091 PAS domain B5S57_09905 SM00387 Histidine kinase-like ATPases B5S57_09905 SM00388 His Kinase A (phosphoacceptor) domain B5S57_09910 SM00382 ATPases associated with a variety of cellular activities B5S57_09910 SM00448 cheY-homologous receiver domain B5S57_09935 SM00382 ATPases associated with a variety of cellular activities B5S57_09990 SM00463 Small MutS-related domain B5S57_10030 SM00825 Beta-ketoacyl synthase B5S57_10040 SM00859 Semialdehyde dehydrogenase, NAD binding domain B5S57_10130 SM00861 Transketolase, pyrimidine binding domain B5S57_10145 SM00881 CoA binding domain B5S57_10155 SM00382 ATPases associated with a variety of cellular activities B5S57_10165 SM00342 helix_turn_helix, arabinose operon control protein B5S57_10170 SM00899 B5S57_10170 B5S57_10190 SM00836 DALR anticodon binding domain B5S57_10190 SM01016 Arginyl tRNA synthetase N terminal dom B5S57_10205 SM00855 Phosphoglycerate mutase family B5S57_10215 SM00382 ATPases associated with a variety of cellular activities B5S57_10215 SM00962 SRP54-type protein, GTPase domain B5S57_10230 SM00448 cheY-homologous receiver domain B5S57_10240 SM00073 Histidine Phosphotransfer domain B5S57_10240 SM00260 Two component signalling adaptor domain B5S57_10240 SM00387 Histidine kinase-like ATPases B5S57_10240 SM01231 B5S57_10240 B5S57_10245 SM00448 cheY-homologous receiver domain B5S57_10255 SM00260 Two component signalling adaptor domain B5S57_10260 SM00260 Two component signalling adaptor domain B5S57_10270 SM00382 ATPases associated with a variety of cellular activities B5S57_10340 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B5S57_10340 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B5S57_10340 SM00493 B5S57_10340 B5S57_10395 SM00859 Semialdehyde dehydrogenase, NAD binding domain B5S57_10415 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_10420 SM00363 S4 RNA-binding domain B5S57_10450 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. B5S57_10455 SM00822 B5S57_10455 B5S57_10465 SM00825 Beta-ketoacyl synthase B5S57_10525 SM00260 Two component signalling adaptor domain B5S57_10525 SM00448 cheY-homologous receiver domain B5S57_10545 SM01144 B5S57_10545 B5S57_10550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_10555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_10590 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain B5S57_10615 SM00563 Phosphate acyltransferases B5S57_10625 SM00978 B5S57_10625 B5S57_10635 SM00344 helix_turn_helix ASNC type B5S57_10660 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_10660 SM00267 diguanylate cyclase B5S57_10690 SM01236 B5S57_10690 B5S57_10705 SM00448 cheY-homologous receiver domain B5S57_10705 SM00862 Transcriptional regulatory protein, C terminal B5S57_10710 SM00387 Histidine kinase-like ATPases B5S57_10710 SM00388 His Kinase A (phosphoacceptor) domain B5S57_10720 SM00344 helix_turn_helix ASNC type B5S57_10735 SM00448 cheY-homologous receiver domain B5S57_10735 SM00862 Transcriptional regulatory protein, C terminal B5S57_10740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_10740 SM00387 Histidine kinase-like ATPases B5S57_10740 SM00388 His Kinase A (phosphoacceptor) domain B5S57_10755 SM00354 helix_turn _helix lactose operon repressor B5S57_10795 SM00825 Beta-ketoacyl synthase B5S57_10800 SM00822 B5S57_10800 B5S57_10810 SM00825 Beta-ketoacyl synthase B5S57_10900 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_10900 SM00387 Histidine kinase-like ATPases B5S57_10900 SM00388 His Kinase A (phosphoacceptor) domain B5S57_10900 SM00448 cheY-homologous receiver domain B5S57_10905 SM00052 Putative diguanylate phosphodiesterase B5S57_10905 SM00421 helix_turn_helix, Lux Regulon B5S57_10905 SM00448 cheY-homologous receiver domain B5S57_10925 SM00382 ATPases associated with a variety of cellular activities B5S57_10930 SM00382 ATPases associated with a variety of cellular activities B5S57_10965 SM00382 ATPases associated with a variety of cellular activities B5S57_10985 SM00382 ATPases associated with a variety of cellular activities B5S57_11000 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_11000 SM00876 Biotin and Thiamin Synthesis associated domain B5S57_11030 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_11040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_11040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_11090 SM00487 DEAD-like helicases superfamily B5S57_11090 SM00490 helicase superfamily c-terminal domain B5S57_11090 SM00982 B5S57_11090 B5S57_11090 SM01058 CarD-like/TRCF domain B5S57_11105 SM00382 ATPases associated with a variety of cellular activities B5S57_11120 SM00849 Metallo-beta-lactamase superfamily B5S57_11125 SM00382 ATPases associated with a variety of cellular activities B5S57_11160 SM00763 PrkA AAA domain B5S57_11180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_11180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_11205 SM00382 ATPases associated with a variety of cellular activities B5S57_11210 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_11210 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. B5S57_11230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_11230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_11250 SM00491 B5S57_11250 B5S57_11265 SM00052 Putative diguanylate phosphodiesterase B5S57_11280 SM00840 B5S57_11280 B5S57_11290 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B5S57_11295 SM00382 ATPases associated with a variety of cellular activities B5S57_11350 SM00028 Tetratricopeptide repeats B5S57_11380 SM00387 Histidine kinase-like ATPases B5S57_11380 SM00388 His Kinase A (phosphoacceptor) domain B5S57_11380 SM00448 cheY-homologous receiver domain B5S57_11535 SM00530 Helix-turn-helix XRE-family like proteins B5S57_11540 SM00530 Helix-turn-helix XRE-family like proteins B5S57_11665 SM00507 HNH nucleases B5S57_11820 SM00267 diguanylate cyclase B5S57_11865 SM00671 Sel1-like repeats. B5S57_11915 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_11915 SM00866 B5S57_11915 B5S57_11920 SM01022 B5S57_11920 B5S57_11930 SM00841 Elongation factor P, C-terminal B5S57_11930 SM01185 B5S57_11930 B5S57_11940 SM00486 DNA polymerase type-B family B5S57_11945 SM00421 helix_turn_helix, Lux Regulon B5S57_11945 SM00448 cheY-homologous receiver domain B5S57_11950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B5S57_11950 SM00465 GIY-YIG type nucleases (URI domain) B5S57_11995 SM00873 B3/4 domain B5S57_11995 SM00874 tRNA synthetase B5 domain B5S57_11995 SM00896 Ferredoxin-fold anticodon binding domain B5S57_12000 SM00411 bacterial (prokaryotic) histone like domain B5S57_12015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) B5S57_12015 SM00091 PAS domain B5S57_12015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12025 SM00052 Putative diguanylate phosphodiesterase B5S57_12025 SM00267 diguanylate cyclase B5S57_12045 SM00479 B5S57_12045 B5S57_12060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12065 SM00382 ATPases associated with a variety of cellular activities B5S57_12140 SM00857 Resolvase, N terminal domain B5S57_12175 SM00382 ATPases associated with a variety of cellular activities B5S57_12210 SM00855 Phosphoglycerate mutase family B5S57_12225 SM00382 ATPases associated with a variety of cellular activities B5S57_12270 SM00028 Tetratricopeptide repeats B5S57_12310 SM00387 Histidine kinase-like ATPases B5S57_12315 SM00448 cheY-homologous receiver domain B5S57_12320 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_12325 SM00260 Two component signalling adaptor domain B5S57_12325 SM00448 cheY-homologous receiver domain B5S57_12330 SM00642 Alpha-amylase domain B5S57_12340 SM00267 diguanylate cyclase B5S57_12355 SM00530 Helix-turn-helix XRE-family like proteins B5S57_12435 SM00382 ATPases associated with a variety of cellular activities B5S57_12435 SM01086 C-terminal, D2-small domain, of ClpB protein B5S57_12460 SM00240 Forkhead associated domain B5S57_12485 SM00220 Serine/Threonine protein kinases, catalytic domain B5S57_12500 SM00862 Transcriptional regulatory protein, C terminal B5S57_12510 SM00862 Transcriptional regulatory protein, C terminal B5S57_12520 SM00342 helix_turn_helix, arabinose operon control protein B5S57_12605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12620 SM00052 Putative diguanylate phosphodiesterase B5S57_12635 SM00354 helix_turn _helix lactose operon repressor B5S57_12640 SM00640 Glycosyl hydrolases family 32 B5S57_12645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12650 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_12655 SM00450 Rhodanese Homology Domain B5S57_12660 SM00382 ATPases associated with a variety of cellular activities B5S57_12745 SM00849 Metallo-beta-lactamase superfamily B5S57_12760 SM00347 helix_turn_helix multiple antibiotic resistance protein B5S57_12770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12775 SM00479 B5S57_12775 B5S57_12780 SM00100 Cyclic nucleotide-monophosphate binding domain B5S57_12780 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_12790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_12795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12800 SM00448 cheY-homologous receiver domain B5S57_12810 SM00073 Histidine Phosphotransfer domain B5S57_12810 SM00260 Two component signalling adaptor domain B5S57_12810 SM00387 Histidine kinase-like ATPases B5S57_12810 SM01231 B5S57_12810 B5S57_12815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12820 SM00260 Two component signalling adaptor domain B5S57_12825 SM00138 Methyltransferase, chemotaxis proteins B5S57_12835 SM00448 cheY-homologous receiver domain B5S57_12850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12910 SM00091 PAS domain B5S57_12910 SM00382 ATPases associated with a variety of cellular activities B5S57_12925 SM00267 diguanylate cyclase B5S57_12935 SM01005 Alanine racemase, C-terminal domain B5S57_12940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_12940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_12960 SM00387 Histidine kinase-like ATPases B5S57_12965 SM00448 cheY-homologous receiver domain B5S57_12975 SM00357 Cold shock protein domain B5S57_12990 SM00487 DEAD-like helicases superfamily B5S57_12990 SM00490 helicase superfamily c-terminal domain B5S57_13000 SM00354 helix_turn _helix lactose operon repressor B5S57_13055 SM00479 B5S57_13055 B5S57_13070 SM00382 ATPases associated with a variety of cellular activities B5S57_13070 SM00487 DEAD-like helicases superfamily B5S57_13070 SM00490 helicase superfamily c-terminal domain B5S57_13070 SM00847 Helicase associated domain (HA2) Add an annotation B5S57_13110 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_13115 SM00479 B5S57_13115 B5S57_13170 SM00857 Resolvase, N terminal domain B5S57_13205 SM00487 DEAD-like helicases superfamily B5S57_13205 SM00490 helicase superfamily c-terminal domain B5S57_13295 SM00849 Metallo-beta-lactamase superfamily B5S57_13365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_13375 SM01144 B5S57_13375 B5S57_13400 SM00382 ATPases associated with a variety of cellular activities B5S57_13420 SM00387 Histidine kinase-like ATPases B5S57_13425 SM00421 helix_turn_helix, Lux Regulon B5S57_13425 SM00448 cheY-homologous receiver domain B5S57_13430 SM00382 ATPases associated with a variety of cellular activities B5S57_13465 SM00382 ATPases associated with a variety of cellular activities B5S57_13495 SM00100 Cyclic nucleotide-monophosphate binding domain B5S57_13495 SM00419 helix_turn_helix, cAMP Regulatory protein B5S57_13590 SM00382 ATPases associated with a variety of cellular activities B5S57_13600 SM00981 B5S57_13600 B5S57_13635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. B5S57_13635 SM00245 tail specific protease B5S57_13640 SM00945 ProQ/FINO family B5S57_13650 SM00382 ATPases associated with a variety of cellular activities B5S57_13670 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_13710 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_13725 SM00382 ATPases associated with a variety of cellular activities B5S57_13745 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase B5S57_13830 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_13830 SM00895 B5S57_13830 B5S57_13855 SM00448 cheY-homologous receiver domain B5S57_13855 SM00862 Transcriptional regulatory protein, C terminal B5S57_13860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_13860 SM00387 Histidine kinase-like ATPases B5S57_13860 SM00388 His Kinase A (phosphoacceptor) domain B5S57_13885 SM00382 ATPases associated with a variety of cellular activities B5S57_13925 SM00342 helix_turn_helix, arabinose operon control protein B5S57_13975 SM00448 cheY-homologous receiver domain B5S57_13980 SM00387 Histidine kinase-like ATPases B5S57_14005 SM00764 Citrate lyase ligase C-terminal domain B5S57_14025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_14030 SM00434 DNA Topoisomerase IV B5S57_14060 SM00852 Probable molybdopterin binding domain B5S57_14075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_14075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_14075 SM01049 B5S57_14075 B5S57_14115 SM00382 ATPases associated with a variety of cellular activities B5S57_14140 SM00363 S4 RNA-binding domain B5S57_14145 SM00487 DEAD-like helicases superfamily B5S57_14145 SM00490 helicase superfamily c-terminal domain B5S57_14155 SM00448 cheY-homologous receiver domain B5S57_14155 SM00862 Transcriptional regulatory protein, C terminal B5S57_14160 SM00387 Histidine kinase-like ATPases B5S57_14180 SM00487 DEAD-like helicases superfamily B5S57_14180 SM00490 helicase superfamily c-terminal domain B5S57_14230 SM00382 ATPases associated with a variety of cellular activities B5S57_14260 SM00155 Phospholipase D. Active site motifs. B5S57_14290 SM00382 ATPases associated with a variety of cellular activities B5S57_14310 SM00382 ATPases associated with a variety of cellular activities B5S57_14315 SM00382 ATPases associated with a variety of cellular activities B5S57_14330 SM01131 B5S57_14330 B5S57_14455 SM00448 cheY-homologous receiver domain B5S57_14455 SM00862 Transcriptional regulatory protein, C terminal B5S57_14465 SM00354 helix_turn _helix lactose operon repressor B5S57_14500 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain B5S57_14500 SM00437 Bacterial DNA topoisomerase I DNA-binding domain B5S57_14500 SM00493 B5S57_14500 B5S57_14525 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_14530 SM00382 ATPases associated with a variety of cellular activities B5S57_14530 SM01086 C-terminal, D2-small domain, of ClpB protein B5S57_14540 SM00357 Cold shock protein domain B5S57_14600 SM00528 Domain in histone-like proteins of HNS family B5S57_14640 SM00387 Histidine kinase-like ATPases B5S57_14645 SM00448 cheY-homologous receiver domain B5S57_14710 SM00919 Malic enzyme, NAD binding domain B5S57_14710 SM01274 B5S57_14710 B5S57_14735 SM00267 diguanylate cyclase B5S57_14745 SM00382 ATPases associated with a variety of cellular activities B5S57_14750 SM00382 ATPases associated with a variety of cellular activities B5S57_14775 SM00052 Putative diguanylate phosphodiesterase B5S57_14775 SM00267 diguanylate cyclase B5S57_14780 SM00363 S4 RNA-binding domain B5S57_14790 SM00481 DNA polymerase alpha chain like domain B5S57_14885 SM00052 Putative diguanylate phosphodiesterase B5S57_14885 SM00091 PAS domain B5S57_14890 SM00020 Trypsin-like serine protease B5S57_14895 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_14950 SM00843 B5S57_14950 B5S57_14955 SM00344 helix_turn_helix ASNC type B5S57_14960 SM01002 Alanine dehydrogenase/PNT, C-terminal domain B5S57_14960 SM01003 Alanine dehydrogenase/PNT, N-terminal domain B5S57_14980 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family B5S57_14985 SM00028 Tetratricopeptide repeats B5S57_14995 SM00411 bacterial (prokaryotic) histone like domain B5S57_15000 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_15020 SM00411 bacterial (prokaryotic) histone like domain B5S57_15025 SM00382 ATPases associated with a variety of cellular activities B5S57_15025 SM00464 Found in ATP-dependent protease La (LON) B5S57_15030 SM00382 ATPases associated with a variety of cellular activities B5S57_15030 SM00994 ClpX C4-type zinc finger B5S57_15030 SM01086 C-terminal, D2-small domain, of ClpB protein B5S57_15050 SM00387 Histidine kinase-like ATPases B5S57_15050 SM00388 His Kinase A (phosphoacceptor) domain B5S57_15055 SM00382 ATPases associated with a variety of cellular activities B5S57_15055 SM00448 cheY-homologous receiver domain B5S57_15085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_15085 SM00387 Histidine kinase-like ATPases B5S57_15090 SM00448 cheY-homologous receiver domain B5S57_15090 SM00862 Transcriptional regulatory protein, C terminal B5S57_15110 SM00487 DEAD-like helicases superfamily B5S57_15110 SM00490 helicase superfamily c-terminal domain B5S57_15115 SM00642 Alpha-amylase domain B5S57_15155 SM00495 Chitin-binding domain type 3 B5S57_15155 SM00636 B5S57_15155 B5S57_15195 SM00474 3'-5' exonuclease B5S57_15225 SM00487 DEAD-like helicases superfamily B5S57_15225 SM00491 B5S57_15225 B5S57_15250 SM00870 B5S57_15250 B5S57_15270 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_15305 SM00493 B5S57_15305 B5S57_15315 SM00382 ATPases associated with a variety of cellular activities B5S57_15330 SM00448 cheY-homologous receiver domain B5S57_15425 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_15430 SM00267 diguanylate cyclase B5S57_15450 SM00852 Probable molybdopterin binding domain B5S57_15455 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_15470 SM00382 ATPases associated with a variety of cellular activities B5S57_15470 SM00448 cheY-homologous receiver domain B5S57_15475 SM00487 DEAD-like helicases superfamily B5S57_15475 SM00490 helicase superfamily c-terminal domain B5S57_15520 SM00823 Phosphopantetheine attachment site B5S57_15520 SM00824 Thioesterase B5S57_15535 SM00923 MbtH-like protein B5S57_15575 SM00900 B5S57_15575 B5S57_15585 SM00478 endonuclease III B5S57_15585 SM00525 B5S57_15585 B5S57_15600 SM00479 B5S57_15600 B5S57_15675 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B5S57_15695 SM00387 Histidine kinase-like ATPases B5S57_15700 SM00862 Transcriptional regulatory protein, C terminal B5S57_15730 SM00244 prohibitin homologues B5S57_15740 SM00422 helix_turn_helix, mercury resistance B5S57_15760 SM00278 Helix-hairpin-helix DNA-binding motif class 1 B5S57_15760 SM00292 breast cancer carboxy-terminal domain B5S57_15760 SM00532 Ligase N family B5S57_15765 SM00771 ZipA, C-terminal domain (FtsZ-binding) B5S57_15800 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_15815 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_15815 SM01091 Transporter associated domain B5S57_15870 SM00936 Penicillin-binding protein 5, C-terminal domain B5S57_15885 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_15995 SM00984 UDP binding domain B5S57_16000 SM00984 UDP binding domain B5S57_16010 SM00226 Low molecular weight phosphatase family B5S57_16055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_16055 SM00387 Histidine kinase-like ATPases B5S57_16055 SM00388 His Kinase A (phosphoacceptor) domain B5S57_16060 SM00448 cheY-homologous receiver domain B5S57_16060 SM00862 Transcriptional regulatory protein, C terminal B5S57_16065 SM00642 Alpha-amylase domain B5S57_16075 SM00354 helix_turn _helix lactose operon repressor B5S57_16090 SM00382 ATPases associated with a variety of cellular activities B5S57_16090 SM00930 B5S57_16090 B5S57_16120 SM00028 Tetratricopeptide repeats B5S57_16125 SM00267 diguanylate cyclase B5S57_16135 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs B5S57_16135 SM00475 5'-3' exonuclease B5S57_16155 SM00981 B5S57_16155 B5S57_16180 SM00861 Transketolase, pyrimidine binding domain B5S57_16260 SM01211 B5S57_16260 B5S57_16265 SM00062 Bacterial periplasmic substrate-binding proteins B5S57_16280 SM00829 Enoylreductase B5S57_16320 SM00271 DnaJ molecular chaperone homology domain B5S57_16390 SM00382 ATPases associated with a variety of cellular activities B5S57_16400 SM00487 DEAD-like helicases superfamily B5S57_16460 SM00257 Lysin motif B5S57_16615 SM00495 Chitin-binding domain type 3 B5S57_16630 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_16630 SM01240 B5S57_16630 B5S57_16645 SM00382 ATPases associated with a variety of cellular activities B5S57_16650 SM00564 beta-propeller repeat B5S57_16680 SM00562 B5S57_16680 B5S57_16705 SM00271 DnaJ molecular chaperone homology domain B5S57_16750 SM01323 B5S57_16750 B5S57_16765 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_16800 SM00382 ATPases associated with a variety of cellular activities B5S57_16830 SM00091 PAS domain B5S57_16830 SM00387 Histidine kinase-like ATPases B5S57_16830 SM00388 His Kinase A (phosphoacceptor) domain B5S57_16835 SM00448 cheY-homologous receiver domain B5S57_16835 SM00862 Transcriptional regulatory protein, C terminal B5S57_16895 SM00382 ATPases associated with a variety of cellular activities B5S57_16895 SM01086 C-terminal, D2-small domain, of ClpB protein B5S57_16905 SM00363 S4 RNA-binding domain B5S57_16920 SM00830 Chorismate mutase type II B5S57_16930 SM00052 Putative diguanylate phosphodiesterase B5S57_16930 SM00267 diguanylate cyclase B5S57_16950 SM00382 ATPases associated with a variety of cellular activities B5S57_16960 SM00830 Chorismate mutase type II B5S57_16975 SM00448 cheY-homologous receiver domain B5S57_16975 SM00850 LytTr DNA-binding domain B5S57_17030 SM00904 Riboflavin kinase B5S57_17045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor B5S57_17115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. B5S57_17125 SM00927 DNA mismatch repair enzyme MutH B5S57_17140 SM00382 ATPases associated with a variety of cellular activities B5S57_17165 SM00487 DEAD-like helicases superfamily B5S57_17165 SM00490 helicase superfamily c-terminal domain B5S57_17175 SM00052 Putative diguanylate phosphodiesterase B5S57_17175 SM00267 diguanylate cyclase B5S57_17200 SM00052 Putative diguanylate phosphodiesterase B5S57_17200 SM00091 PAS domain B5S57_17200 SM00267 diguanylate cyclase B5S57_17220 SM00347 helix_turn_helix multiple antibiotic resistance protein B5S57_17225 SM00028 Tetratricopeptide repeats B5S57_17230 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_17230 SM00322 K homology RNA-binding domain B5S57_17235 SM01387 B5S57_17235 B5S57_17255 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_17255 SM00322 K homology RNA-binding domain B5S57_17290 SM00382 ATPases associated with a variety of cellular activities B5S57_17300 SM01103 B5S57_17300 B5S57_17370 SM00091 PAS domain B5S57_17370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_17370 SM00387 Histidine kinase-like ATPases B5S57_17370 SM00388 His Kinase A (phosphoacceptor) domain B5S57_17370 SM00448 cheY-homologous receiver domain B5S57_17390 SM00382 ATPases associated with a variety of cellular activities B5S57_17395 SM00382 ATPases associated with a variety of cellular activities B5S57_17415 SM01068 Putative carbohydrate binding domain B5S57_17425 SM00382 ATPases associated with a variety of cellular activities B5S57_17445 SM00938 Nitrogen regulatory protein P-II B5S57_17485 SM00487 DEAD-like helicases superfamily B5S57_17485 SM00490 helicase superfamily c-terminal domain B5S57_17485 SM00847 Helicase associated domain (HA2) Add an annotation B5S57_17535 SM00382 ATPases associated with a variety of cellular activities B5S57_17545 SM00947 Carbonic anhydrase B5S57_17575 SM00345 helix_turn_helix gluconate operon transcriptional repressor B5S57_17575 SM00895 B5S57_17575 B5S57_17600 SM00644 B5S57_17600 B5S57_17665 SM00382 ATPases associated with a variety of cellular activities B5S57_17665 SM00962 SRP54-type protein, GTPase domain B5S57_17665 SM00963 SRP54-type protein, helical bundle domain B5S57_17675 SM01091 Transporter associated domain B5S57_17700 SM00829 Enoylreductase B5S57_17765 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain B5S57_17775 SM00382 ATPases associated with a variety of cellular activities B5S57_17785 SM00382 ATPases associated with a variety of cellular activities B5S57_17810 SM00533 DNA-binding domain of DNA mismatch repair MUTS family B5S57_17810 SM00534 ATPase domain of DNA mismatch repair MUTS family B5S57_17820 SM00257 Lysin motif B5S57_17865 SM00905 Dihydroneopterin aldolase B5S57_17870 SM01207 B5S57_17870 B5S57_17895 SM00400 zinc finger B5S57_17895 SM00493 B5S57_17895 B5S57_17895 SM00766 DNA primase DnaG DnaB-binding B5S57_17910 SM00530 Helix-turn-helix XRE-family like proteins B5S57_17970 SM00857 Resolvase, N terminal domain B5S57_17990 SM00530 Helix-turn-helix XRE-family like proteins B5S57_18010 SM00382 ATPases associated with a variety of cellular activities B5S57_18080 SM00530 Helix-turn-helix XRE-family like proteins B5S57_18110 SM00482 DNA polymerase A domain B5S57_18160 SM00886 Stress responsive A/B Barrel Domain B5S57_18200 SM00563 Phosphate acyltransferases B5S57_18205 SM00635 Bacterial Ig-like domain 2 B5S57_18215 SM00420 helix_turn_helix, Deoxyribose operon repressor B5S57_18215 SM01134 B5S57_18215 B5S57_18225 SM00267 diguanylate cyclase B5S57_18265 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B5S57_18280 SM00861 Transketolase, pyrimidine binding domain B5S57_18290 SM00731 SprT homologues. B5S57_18315 SM00732 Likely ribonuclease with RNase H fold. B5S57_18345 SM01152 B5S57_18345 B5S57_18360 SM00729 Elongator protein 3, MiaB family, Radical SAM B5S57_18375 SM00478 endonuclease III B5S57_18375 SM00525 B5S57_18375 B5S57_18435 SM00271 DnaJ molecular chaperone homology domain B5S57_18455 SM00650 Ribosomal RNA adenine dimethylases B5S57_18580 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_18605 SM00560 LamG-like jellyroll fold domain B5S57_18650 SM00382 ATPases associated with a variety of cellular activities B5S57_18655 SM00028 Tetratricopeptide repeats B5S57_18665 SM00965 Secretin and TonB N terminus short domain B5S57_18685 SM00052 Putative diguanylate phosphodiesterase B5S57_18685 SM00267 diguanylate cyclase B5S57_18695 SM00421 helix_turn_helix, Lux Regulon B5S57_18715 SM00116 Domain in cystathionine beta-synthase and other proteins. B5S57_18715 SM00924 MgtE intracellular N domain B5S57_18740 SM01018 B12 binding domain B5S57_18880 SM01005 Alanine racemase, C-terminal domain B5S57_18885 SM00382 ATPases associated with a variety of cellular activities B5S57_18920 SM00838 Elongation factor G C-terminus B5S57_18920 SM00889 Elongation factor G, domain IV B5S57_18960 SM00320 WD40 repeats B5S57_18975 SM00244 prohibitin homologues B5S57_18980 SM00244 prohibitin homologues B5S57_19000 SM00853 MutL C terminal dimerisation domain B5S57_19000 SM01340 B5S57_19000 B5S57_19005 SM00257 Lysin motif B5S57_19005 SM00646 B5S57_19005 B5S57_19065 SM00479 B5S57_19065 B5S57_19085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). B5S57_19085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_19130 SM00663 RNA polymerase I subunit A N-terminus B5S57_19155 SM00649 Ribosomal protein L11/L12 B5S57_19160 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. B5S57_19160 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. B5S57_19215 SM00155 Phospholipase D. Active site motifs. B5S57_19270 SM00357 Cold shock protein domain B5S57_19270 SM00382 ATPases associated with a variety of cellular activities B5S57_19270 SM00959 Rho termination factor, N-terminal domain B5S57_19280 SM00487 DEAD-like helicases superfamily B5S57_19280 SM00490 helicase superfamily c-terminal domain B5S57_19295 SM00072 Guanylate kinase homologues. B5S57_19300 SM01409 B5S57_19300 B5S57_19305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. B5S57_19305 SM00954 Region found in RelA / SpoT proteins B5S57_19310 SM00487 DEAD-like helicases superfamily B5S57_19310 SM00490 helicase superfamily c-terminal domain B5S57_19320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_19320 SM00387 Histidine kinase-like ATPases B5S57_19320 SM00388 His Kinase A (phosphoacceptor) domain B5S57_19325 SM00448 cheY-homologous receiver domain B5S57_19325 SM00862 Transcriptional regulatory protein, C terminal B5S57_19330 SM00495 Chitin-binding domain type 3 B5S57_19375 SM00316 Ribosomal protein S1-like RNA-binding domain B5S57_19375 SM00732 Likely ribonuclease with RNase H fold. B5S57_19455 SM00382 ATPases associated with a variety of cellular activities B5S57_19470 SM00363 S4 RNA-binding domain B5S57_19510 SM01230 B5S57_19510 B5S57_19520 SM00091 PAS domain B5S57_19520 SM00387 Histidine kinase-like ATPases B5S57_19520 SM00388 His Kinase A (phosphoacceptor) domain B5S57_19525 SM00382 ATPases associated with a variety of cellular activities B5S57_19525 SM00448 cheY-homologous receiver domain B5S57_19530 SM00052 Putative diguanylate phosphodiesterase B5S57_19530 SM00267 diguanylate cyclase B5S57_19530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain B5S57_19605 SM00360 RNA recognition motif B5S57_19645 SM00530 Helix-turn-helix XRE-family like proteins B5S57_19695 SM00857 Resolvase, N terminal domain B5S57_19730 SM01038 Beta galactosidase small chain B5S57_19765 SM00563 Phosphate acyltransferases B5S57_19790 SM00450 Rhodanese Homology Domain B5S57_19805 SM00382 ATPases associated with a variety of cellular activities B5S57_19810 SM00382 ATPases associated with a variety of cellular activities B5S57_19810 SM00962 SRP54-type protein, GTPase domain B5S57_19810 SM00963 SRP54-type protein, helical bundle domain B5S57_19900 SM00052 Putative diguanylate phosphodiesterase B5S57_19925 SM01144 B5S57_19925 B5S57_19960 SM01219 B5S57_19960 B5S57_20045 SM01001 AIR carboxylase B5S57_20085 SM00857 Resolvase, N terminal domain B5S57_20165 SM00257 Lysin motif