VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 SUPERFAMILY SSF54593 5 341 1.21E-78 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 144 1.0E-55 T 13-10-2018 VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 4.4E-14 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 Gene3D G3DSA:3.10.180.10 159 355 2.5E-69 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 Gene3D G3DSA:3.10.180.10 3 158 1.8E-47 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 9.0E-131 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VAA_01791 c6a35ff63517db07ef3cd175393fc3af 357 PIRSF PIRSF009283 1 355 5.0E-125 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VAA_02881 8868a5711f6a81386e49c0d0553e6056 299 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 14 281 4.4E-100 T 13-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VAA_02881 8868a5711f6a81386e49c0d0553e6056 299 Gene3D G3DSA:3.20.20.150 7 292 1.3E-67 T 13-10-2018 VAA_02881 8868a5711f6a81386e49c0d0553e6056 299 Pfam PF01261 Xylose isomerase-like TIM barrel 35 244 2.0E-32 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VAA_02881 8868a5711f6a81386e49c0d0553e6056 299 SUPERFAMILY SSF51658 9 290 5.5E-52 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily VAA_02070 6f235f7d6bb67f9d4dacc1659ba4d292 436 Gene3D G3DSA:1.20.1600.10 24 426 2.8E-84 T 13-10-2018 VAA_02070 6f235f7d6bb67f9d4dacc1659ba4d292 436 SUPERFAMILY SSF56954 25 430 2.75E-88 T 13-10-2018 VAA_02070 6f235f7d6bb67f9d4dacc1659ba4d292 436 Pfam PF02321 Outer membrane efflux protein 233 416 2.1E-28 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_02070 6f235f7d6bb67f9d4dacc1659ba4d292 436 Pfam PF02321 Outer membrane efflux protein 26 212 3.2E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_02070 6f235f7d6bb67f9d4dacc1659ba4d292 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 24 430 5.5E-124 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 Gene3D G3DSA:3.40.50.170 82 277 1.1E-66 T 13-10-2018 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.1E-121 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 Gene3D G3DSA:3.30.70.260 1 81 6.0E-14 T 13-10-2018 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PIRSF PIRSF036480 1 277 1.5E-111 T 13-10-2018 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 Pfam PF01842 ACT domain 5 66 8.8E-7 T 13-10-2018 IPR002912 ACT domain VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 SUPERFAMILY SSF53328 82 276 3.4E-59 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.678 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.4E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.4E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.4E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.4E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.4E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.4E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 Pfam PF00551 Formyl transferase 82 259 4.0E-48 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_02337 9ad9a8da2d563b8d84a3b1f5898b27f0 277 SUPERFAMILY SSF55021 4 55 3.16E-8 T 13-10-2018 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 Gene3D G3DSA:4.10.520.10 1 97 7.2E-38 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.347 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 4.9E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 SMART SM00411 3 92 6.8E-42 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 1.3E-50 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VAA_03106 622b13c4482773853fa0eeb211cc182e 98 SUPERFAMILY SSF47729 3 95 1.06E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 Gene3D G3DSA:3.40.190.10 93 295 3.6E-69 T 13-10-2018 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 Pfam PF03466 LysR substrate binding domain 98 299 2.6E-23 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 Gene3D G3DSA:1.10.10.10 3 91 6.2E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 SUPERFAMILY SSF46785 7 88 4.0E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 Gene3D G3DSA:3.40.190.10 172 271 3.6E-69 T 13-10-2018 VAA_00862 38a0a9514179ebd81e2ee5f7de2b93e9 314 SUPERFAMILY SSF53850 92 298 4.89E-41 T 13-10-2018 VAA_00756 605d647d76e328cf522668f2f4717c5c 148 Gene3D G3DSA:1.20.120.910 17 147 9.0E-36 T 13-10-2018 VAA_00756 605d647d76e328cf522668f2f4717c5c 148 SUPERFAMILY SSF109635 9 107 8.63E-37 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily VAA_00756 605d647d76e328cf522668f2f4717c5c 148 SUPERFAMILY SSF57716 108 146 5.99E-10 T 13-10-2018 VAA_00756 605d647d76e328cf522668f2f4717c5c 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.821 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VAA_00756 605d647d76e328cf522668f2f4717c5c 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.4E-51 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VAA_00756 605d647d76e328cf522668f2f4717c5c 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VAA_00756 605d647d76e328cf522668f2f4717c5c 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 3.2E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VAA_00756 605d647d76e328cf522668f2f4717c5c 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VAA_00756 605d647d76e328cf522668f2f4717c5c 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VAA_02015 a417110f6106e169aba75d39eaa1cc8a 501 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 440 9.0E-145 T 13-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VAA_01534 610159e05cbf1207257a92c864b13d9b 376 Gene3D G3DSA:3.40.47.10 14 374 2.6E-154 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_01534 610159e05cbf1207257a92c864b13d9b 376 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 17 337 64.594 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_01534 610159e05cbf1207257a92c864b13d9b 376 SUPERFAMILY SSF53901 19 338 1.88E-63 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_01534 610159e05cbf1207257a92c864b13d9b 376 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 18 337 4.5E-108 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_01534 610159e05cbf1207257a92c864b13d9b 376 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 120 197 1.4E-27 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_01534 610159e05cbf1207257a92c864b13d9b 376 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 248 337 4.6E-35 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 Gene3D G3DSA:3.40.50.300 276 540 4.8E-54 T 13-10-2018 VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 SUPERFAMILY SSF52540 2 255 3.48E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 SUPERFAMILY SSF52540 277 494 3.28E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 Pfam PF00005 ABC transporter 328 459 7.0E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 SMART SM00382 337 503 3.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 SMART SM00382 26 223 4.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 Pfam PF00005 ABC transporter 17 178 2.7E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 Pfam PF12848 ABC transporter 217 295 7.2E-27 T 13-10-2018 IPR032781 ABC-transporter extension domain VAA_02656 d7e3f7025411379cc6ee4cc1f3d9c360 639 Gene3D G3DSA:3.40.50.300 7 274 1.0E-57 T 13-10-2018 VAA_03308 a6650d45363420273ea03a659b4ff3cb 289 Pfam PF04280 Tim44-like domain 167 288 4.0E-13 T 13-10-2018 IPR007379 Tim44-like domain VAA_03308 a6650d45363420273ea03a659b4ff3cb 289 Pfam PF07466 Protein of unknown function (DUF1517) 28 123 1.2E-5 T 13-10-2018 IPR010903 Protein of unknown function DUF1517 VAA_03308 a6650d45363420273ea03a659b4ff3cb 289 SMART SM00978 158 289 5.7E-35 T 13-10-2018 IPR007379 Tim44-like domain VAA_03308 a6650d45363420273ea03a659b4ff3cb 289 SUPERFAMILY SSF54427 168 288 4.03E-14 T 13-10-2018 IPR032710 NTF2-like domain superfamily VAA_03308 a6650d45363420273ea03a659b4ff3cb 289 Gene3D G3DSA:3.10.450.240 165 288 1.5E-5 T 13-10-2018 VAA_01520 33d6f090601da434fc55f5d40c8e654f 246 SUPERFAMILY SSF53850 21 243 4.83E-71 T 13-10-2018 VAA_01520 33d6f090601da434fc55f5d40c8e654f 246 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 244 1.2E-117 T 13-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 VAA_01520 33d6f090601da434fc55f5d40c8e654f 246 Gene3D G3DSA:3.40.190.10 29 243 7.6E-79 T 13-10-2018 VAA_01520 33d6f090601da434fc55f5d40c8e654f 246 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 243 1.3E-48 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VAA_01520 33d6f090601da434fc55f5d40c8e654f 246 Gene3D G3DSA:3.40.190.100 110 219 7.6E-79 T 13-10-2018 VAA_00320 bc2eb0b4ea318bd04843f787c5f8f3b0 168 Pfam PF01381 Helix-turn-helix 12 66 3.8E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00320 bc2eb0b4ea318bd04843f787c5f8f3b0 168 SMART SM00530 11 66 1.1E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00320 bc2eb0b4ea318bd04843f787c5f8f3b0 168 Gene3D G3DSA:1.10.260.40 5 70 1.3E-18 T 13-10-2018 VAA_00320 bc2eb0b4ea318bd04843f787c5f8f3b0 168 SUPERFAMILY SSF47413 4 68 1.44E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01340 12d4de8d66940678ccf772edb96b1fd7 328 Gene3D G3DSA:1.10.3720.10 68 324 5.6E-62 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01340 12d4de8d66940678ccf772edb96b1fd7 328 SUPERFAMILY SSF161098 72 314 1.01E-52 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01340 12d4de8d66940678ccf772edb96b1fd7 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 311 1.5E-7 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00536 eeaa974d650b4f40b71c228a93f848e3 272 Gene3D G3DSA:3.40.50.300 21 268 1.3E-64 T 13-10-2018 VAA_00536 eeaa974d650b4f40b71c228a93f848e3 272 SUPERFAMILY SSF52540 23 258 2.01E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00536 eeaa974d650b4f40b71c228a93f848e3 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00536 eeaa974d650b4f40b71c228a93f848e3 272 Pfam PF00005 ABC transporter 41 197 2.9E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00536 eeaa974d650b4f40b71c228a93f848e3 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 8.8E-122 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VAA_00536 eeaa974d650b4f40b71c228a93f848e3 272 SMART SM00382 50 253 1.2E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00247 332c4047db0ca25a4b0e7f8fbcc4ce88 295 SUPERFAMILY SSF46785 4 111 4.3E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00247 332c4047db0ca25a4b0e7f8fbcc4ce88 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.2E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00247 332c4047db0ca25a4b0e7f8fbcc4ce88 295 Gene3D G3DSA:3.40.190.290 91 289 6.1E-62 T 13-10-2018 VAA_00247 332c4047db0ca25a4b0e7f8fbcc4ce88 295 Gene3D G3DSA:1.10.10.10 3 88 7.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00247 332c4047db0ca25a4b0e7f8fbcc4ce88 295 Pfam PF03466 LysR substrate binding domain 88 289 8.1E-43 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00247 332c4047db0ca25a4b0e7f8fbcc4ce88 295 SUPERFAMILY SSF53850 90 291 4.1E-45 T 13-10-2018 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 SMART SM01086 656 745 2.7E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 6.9E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Gene3D G3DSA:3.40.50.300 442 655 3.9E-75 T 13-10-2018 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Gene3D G3DSA:3.40.50.300 159 353 7.4E-63 T 13-10-2018 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Gene3D G3DSA:1.10.8.60 354 441 1.6E-34 T 13-10-2018 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 6.5E-47 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 8.1E-13 T 13-10-2018 IPR004176 Clp, N-terminal VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 6.9E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 6.9E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 6.9E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 6.9E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 SUPERFAMILY SSF52540 440 744 1.12E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 SUPERFAMILY SSF52540 171 429 4.34E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Gene3D G3DSA:1.10.8.60 656 755 1.3E-30 T 13-10-2018 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 SMART SM00382 209 354 1.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 SMART SM00382 490 657 1.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 SUPERFAMILY SSF81923 1 142 1.7E-59 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Gene3D G3DSA:1.10.1780.10 1 143 2.1E-43 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAA_02186 ca5b19e37a19f77b6ae38df5a6e21df0 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 6.5E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_01129 b59d95535026070f9ca1cde40d972b5b 300 Gene3D G3DSA:3.40.50.2000 188 295 2.8E-111 T 13-10-2018 VAA_01129 b59d95535026070f9ca1cde40d972b5b 300 SUPERFAMILY SSF53756 2 294 1.0E-100 T 13-10-2018 VAA_01129 b59d95535026070f9ca1cde40d972b5b 300 Gene3D G3DSA:3.40.50.2000 3 187 2.8E-111 T 13-10-2018 VAA_01129 b59d95535026070f9ca1cde40d972b5b 300 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 295 2.1E-118 T 13-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 VAA_01129 b59d95535026070f9ca1cde40d972b5b 300 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 295 1.4E-87 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 SMART SM00304 442 495 3.2E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 583 737 1.7E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 Gene3D G3DSA:3.30.450.20 252 421 1.6E-7 T 13-10-2018 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 Gene3D G3DSA:1.10.287.950 442 773 4.1E-72 T 13-10-2018 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 SMART SM00283 510 771 4.9E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 SUPERFAMILY SSF58104 463 772 3.01E-71 T 13-10-2018 VAA_02980 72bb6951812f0a6dd8c412a9436aa9d5 774 Pfam PF00672 HAMP domain 444 491 9.9E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00513 faebe738461791341b26b91fc345bb7a 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 2.3E-33 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VAA_00513 faebe738461791341b26b91fc345bb7a 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.0E-34 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VAA_00513 faebe738461791341b26b91fc345bb7a 64 Gene3D G3DSA:1.10.10.600 1 64 4.2E-30 T 13-10-2018 IPR036762 IscX-like superfamily VAA_00513 faebe738461791341b26b91fc345bb7a 64 SUPERFAMILY SSF140319 1 62 7.06E-28 T 13-10-2018 IPR036762 IscX-like superfamily VAA_00513 faebe738461791341b26b91fc345bb7a 64 PIRSF PIRSF039003 1 64 5.7E-34 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Pfam PF01627 Hpt domain 8 102 4.8E-17 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Gene3D G3DSA:1.20.120.160 2 142 2.7E-34 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SUPERFAMILY SSF50341 569 701 6.15E-28 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SMART SM00073 4 102 1.2E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SUPERFAMILY SSF55874 385 568 2.62E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SMART SM00260 562 701 9.5E-30 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Gene3D G3DSA:1.10.287.560 318 381 1.7E-16 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Gene3D G3DSA:3.30.565.10 382 569 2.0E-59 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SMART SM00387 426 570 1.0E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SMART SM01231 318 381 3.5E-18 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Gene3D G3DSA:2.40.50.180 593 656 2.0E-34 T 13-10-2018 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SUPERFAMILY SSF47384 319 382 1.02E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 569 3.8E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01902 3564090110b6f4b4de69b8718849ed68 718 SUPERFAMILY SSF47226 5 128 1.23E-27 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 319 381 1.5E-15 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Pfam PF01584 CheW-like domain 577 702 3.4E-21 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 Gene3D G3DSA:2.30.30.40 570 697 2.0E-34 T 13-10-2018 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01902 3564090110b6f4b4de69b8718849ed68 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 567 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 SUPERFAMILY SSF53098 2 209 6.42E-69 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 Gene3D G3DSA:1.10.150.80 195 292 1.3E-15 T 13-10-2018 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 Pfam PF00570 HRDC domain 213 279 2.1E-7 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 SUPERFAMILY SSF47819 193 301 5.23E-21 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 SUPERFAMILY SSF47819 296 371 7.41E-20 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 Gene3D G3DSA:1.10.150.80 295 372 6.3E-26 T 13-10-2018 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 Gene3D G3DSA:3.30.420.10 1 194 4.6E-67 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 2.7E-148 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 Pfam PF01612 3'-5' exonuclease 3 170 8.0E-38 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.617 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VAA_02329 2a11eebee0bf7f43b84cefeb1f11c9a1 372 SMART SM00474 3 171 7.3E-42 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 220 8.3E-50 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 SUPERFAMILY SSF53790 8 248 6.41E-79 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 Gene3D G3DSA:3.30.950.10 125 250 8.5E-46 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 9 242 9.4E-94 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 Gene3D G3DSA:3.40.1010.10 7 124 1.7E-44 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VAA_01528 78d436798af62fe2ff084e6cf2ed40ef 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 14 28 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_02725 26eed6e141d71693d744e4d2a2bc6ac9 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.82 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAA_02725 26eed6e141d71693d744e4d2a2bc6ac9 175 Gene3D G3DSA:3.90.80.10 1 175 1.6E-67 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAA_02725 26eed6e141d71693d744e4d2a2bc6ac9 175 SUPERFAMILY SSF50324 3 174 3.92E-65 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAA_02725 26eed6e141d71693d744e4d2a2bc6ac9 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAA_02725 26eed6e141d71693d744e4d2a2bc6ac9 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.4E-52 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VAA_02204 2b7f3b372b1b6ecf2fd9c8e60e2fc234 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 7.7E-12 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_02204 2b7f3b372b1b6ecf2fd9c8e60e2fc234 434 SUPERFAMILY SSF53613 31 417 3.74E-44 T 13-10-2018 IPR029056 Ribokinase-like VAA_03445 ab53ce4cbfecd489b4e3196176c5c37f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.5E-16 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAA_03445 ab53ce4cbfecd489b4e3196176c5c37f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.5E-16 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAA_03445 ab53ce4cbfecd489b4e3196176c5c37f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.5E-16 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAA_03445 ab53ce4cbfecd489b4e3196176c5c37f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.3E-32 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VAA_03445 ab53ce4cbfecd489b4e3196176c5c37f 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-27 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAA_03445 ab53ce4cbfecd489b4e3196176c5c37f 89 PIRSF PIRSF004669 1 89 2.8E-29 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VAA_01149 d19f745e3e2f0af1bb189662ba5d020a 269 SUPERFAMILY SSF53850 32 269 2.46E-78 T 13-10-2018 VAA_01149 d19f745e3e2f0af1bb189662ba5d020a 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.4E-125 T 13-10-2018 IPR004872 Lipoprotein NlpA family VAA_01149 d19f745e3e2f0af1bb189662ba5d020a 269 Gene3D G3DSA:3.40.190.10 34 263 1.4E-92 T 13-10-2018 VAA_01149 d19f745e3e2f0af1bb189662ba5d020a 269 Gene3D G3DSA:3.40.190.10 115 219 1.4E-92 T 13-10-2018 VAA_01149 d19f745e3e2f0af1bb189662ba5d020a 269 Pfam PF03180 NLPA lipoprotein 33 269 4.2E-97 T 13-10-2018 IPR004872 Lipoprotein NlpA family VAA_01149 d19f745e3e2f0af1bb189662ba5d020a 269 PIRSF PIRSF002854 1 269 2.6E-97 T 13-10-2018 IPR004872 Lipoprotein NlpA family VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 SMART SM01118 21 222 1.5E-42 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 Gene3D G3DSA:2.40.320.10 19 218 1.0E-36 T 13-10-2018 VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 SMART SM00880 248 516 5.8E-23 T 13-10-2018 IPR007899 CHAD domain VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 SUPERFAMILY SSF55154 19 233 1.05E-51 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 Pfam PF01928 CYTH domain 22 216 2.5E-36 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 Pfam PF05235 CHAD domain 249 415 3.8E-8 T 13-10-2018 IPR007899 CHAD domain VAA_03756 209c778c83dcf0f86eb766963e93e37f 526 Gene3D G3DSA:1.40.20.10 231 428 1.7E-13 T 13-10-2018 IPR038186 CHAD domain superfamily VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Pfam PF16458 Beta-prism lectin 571 700 2.5E-57 T 13-10-2018 IPR032496 Hemolysin, beta-prism lectin VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Pfam PF16458 Beta-prism lectin 885 1018 3.0E-55 T 13-10-2018 IPR032496 Hemolysin, beta-prism lectin VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 380 439 4.4E-7 T 13-10-2018 VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Gene3D G3DSA:2.100.10.30 567 702 3.8E-34 T 13-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Gene3D G3DSA:2.100.10.30 883 1021 2.9E-36 T 13-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 SUPERFAMILY SSF69318 315 816 7.41E-20 T 13-10-2018 VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Gene3D G3DSA:2.60.20.40 84 183 8.7E-43 T 13-10-2018 VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 Gene3D G3DSA:2.60.20.40 184 279 5.1E-40 T 13-10-2018 VAA_01117 9a2ee073009ff04a903cca2ea56f4483 1021 ProSitePatterns PS00018 EF-hand calcium-binding domain. 318 330 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site VAA_02746 7a7ce5cf210db110d4b9c584603a2bbc 121 Pfam PF01699 Sodium/calcium exchanger protein 5 118 1.0E-24 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VAA_02746 7a7ce5cf210db110d4b9c584603a2bbc 121 Gene3D G3DSA:1.20.1420.30 35 118 2.0E-37 T 13-10-2018 VAA_02746 7a7ce5cf210db110d4b9c584603a2bbc 121 Gene3D G3DSA:1.20.58.1130 8 34 2.0E-37 T 13-10-2018 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 Gene3D G3DSA:1.20.120.1460 249 325 1.1E-21 T 13-10-2018 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 Gene3D G3DSA:3.20.20.70 4 245 6.9E-73 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.436 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 317 8.0E-94 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 SUPERFAMILY SSF51395 6 318 8.55E-73 T 13-10-2018 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 1.2E-160 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 PIRSF PIRSF006621 1 324 3.3E-75 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_00267 7ebf8db69b0cd4565c421db33edd7ea2 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_02411 7bfb70d69e861e11cbfcb9718985a24a 680 Pfam PF01432 Peptidase family M3 222 677 7.4E-166 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VAA_02411 7bfb70d69e861e11cbfcb9718985a24a 680 Gene3D G3DSA:1.10.1370.10 140 610 2.1E-271 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VAA_02411 7bfb70d69e861e11cbfcb9718985a24a 680 Gene3D G3DSA:1.10.1370.40 13 675 2.1E-271 T 13-10-2018 VAA_02411 7bfb70d69e861e11cbfcb9718985a24a 680 SUPERFAMILY SSF55486 1 677 1.59E-212 T 13-10-2018 VAA_00691 7a4246d80b0439895814cc925ef7bc2a 161 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.7E-69 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAA_00691 7a4246d80b0439895814cc925ef7bc2a 161 Pfam PF02542 YgbB family 2 155 2.0E-65 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAA_00691 7a4246d80b0439895814cc925ef7bc2a 161 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.908 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAA_00691 7a4246d80b0439895814cc925ef7bc2a 161 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAA_00691 7a4246d80b0439895814cc925ef7bc2a 161 Gene3D G3DSA:3.30.1330.50 1 161 6.8E-70 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAA_00691 7a4246d80b0439895814cc925ef7bc2a 161 SUPERFAMILY SSF69765 1 158 2.09E-65 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VAA_02574 8e249c86f22e5ec8a2658300ea90b2f6 165 Gene3D G3DSA:1.20.120.1490 42 158 3.2E-29 T 13-10-2018 VAA_02574 8e249c86f22e5ec8a2658300ea90b2f6 165 PIRSF PIRSF034445 1 156 1.4E-18 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VAA_02574 8e249c86f22e5ec8a2658300ea90b2f6 165 Pfam PF07813 LTXXQ motif family protein 43 146 3.0E-21 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VAA_01761 336bbca9b846c1aa9934365728824e6a 179 Pfam PF00731 AIR carboxylase 20 168 1.0E-63 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VAA_01761 336bbca9b846c1aa9934365728824e6a 179 PIRSF PIRSF001338 16 178 1.3E-67 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VAA_01761 336bbca9b846c1aa9934365728824e6a 179 SMART SM01001 19 170 7.2E-103 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VAA_01761 336bbca9b846c1aa9934365728824e6a 179 Gene3D G3DSA:3.40.50.7700 10 179 3.3E-72 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VAA_01761 336bbca9b846c1aa9934365728824e6a 179 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 21 174 31.908 T 13-10-2018 IPR033747 Class I PurE VAA_01761 336bbca9b846c1aa9934365728824e6a 179 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 21 175 5.3E-66 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VAA_01761 336bbca9b846c1aa9934365728824e6a 179 SUPERFAMILY SSF52255 20 176 1.96E-65 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VAA_00417 373ae6ec2a6cf8e6941b24a6d1847948 123 Pfam PF10973 Protein of unknown function (DUF2799) 38 118 1.0E-21 T 13-10-2018 IPR021242 Protein of unknown function DUF2799 VAA_00325 bfb291f8a421a2a1e9e380a7530b1f9d 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 102 2.3E-38 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VAA_00325 bfb291f8a421a2a1e9e380a7530b1f9d 103 SUPERFAMILY SSF55159 4 99 2.62E-27 T 13-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VAA_00325 bfb291f8a421a2a1e9e380a7530b1f9d 103 Gene3D G3DSA:3.30.780.10 23 103 8.6E-33 T 13-10-2018 VAA_00325 bfb291f8a421a2a1e9e380a7530b1f9d 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.8E-20 T 13-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VAA_00325 bfb291f8a421a2a1e9e380a7530b1f9d 103 PIRSF PIRSF037511 1 103 4.3E-33 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 PIRSF PIRSF001362 1 436 5.7E-223 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 3.1E-89 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 2.9E-113 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 SUPERFAMILY SSF51621 6 436 8.52E-151 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 Pfam PF00463 Isocitrate lyase family 14 257 2.8E-61 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 Pfam PF00463 Isocitrate lyase family 258 436 3.7E-52 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 Gene3D G3DSA:3.20.20.60 1 419 5.7E-181 T 13-10-2018 VAA_00529 44a73e5b07a1fe6bc0c2935dd16c2806 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VAA_02713 a62850c4b9fff16a7ac1c88c777fe987 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 37.98 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VAA_02713 a62850c4b9fff16a7ac1c88c777fe987 205 SUPERFAMILY SSF52540 24 198 1.23E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02713 a62850c4b9fff16a7ac1c88c777fe987 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 196 1.9E-82 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VAA_02713 a62850c4b9fff16a7ac1c88c777fe987 205 Gene3D G3DSA:3.40.50.300 9 205 1.1E-79 T 13-10-2018 VAA_02713 a62850c4b9fff16a7ac1c88c777fe987 205 Pfam PF01583 Adenylylsulphate kinase 31 185 8.6E-72 T 13-10-2018 VAA_00664 e9dca57020d0f0bb1987b4e9284d7b1f 193 Pfam PF13511 Domain of unknown function (DUF4124) 24 68 2.3E-10 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 VAA_00266 6a61100b330bb3677aa017b463afc924 154 Gene3D G3DSA:1.10.10.10 5 91 1.9E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00266 6a61100b330bb3677aa017b463afc924 154 SUPERFAMILY SSF46785 14 146 7.37E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00266 6a61100b330bb3677aa017b463afc924 154 Gene3D G3DSA:3.30.1490.190 93 151 5.4E-17 T 13-10-2018 VAA_00266 6a61100b330bb3677aa017b463afc924 154 Pfam PF01475 Ferric uptake regulator family 22 140 5.6E-21 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Pfam PF13302 Acetyltransferase (GNAT) domain 745 883 6.4E-8 T 13-10-2018 IPR000182 GNAT domain VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 SUPERFAMILY SSF52210 140 298 3.01E-36 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Gene3D G3DSA:3.40.630.30 736 903 2.5E-38 T 13-10-2018 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Gene3D G3DSA:3.30.470.20 499 710 5.6E-57 T 13-10-2018 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Gene3D G3DSA:3.30.1490.20 518 595 5.6E-57 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 SMART SM00881 14 109 3.0E-20 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Gene3D G3DSA:3.40.50.261 302 472 7.2E-53 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 SUPERFAMILY SSF51735 6 148 9.0E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Gene3D G3DSA:3.40.50.720 8 138 4.6E-32 T 13-10-2018 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Gene3D G3DSA:3.40.50.261 139 300 2.8E-50 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Pfam PF13380 CoA binding domain 18 143 1.9E-20 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 160 297 2.5E-49 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 SUPERFAMILY SSF56059 499 711 5.95E-31 T 13-10-2018 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 Pfam PF13549 ATP-grasp domain 497 713 9.4E-70 T 13-10-2018 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 SUPERFAMILY SSF52210 304 464 5.23E-43 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_00331 512ea81c612f29c0c99fc61b83adfe08 903 SUPERFAMILY SSF55729 742 888 1.98E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 3.6E-112 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 Gene3D G3DSA:1.10.540.10 124 236 4.2E-98 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 Gene3D G3DSA:2.40.110.10 237 360 4.2E-98 T 13-10-2018 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 SUPERFAMILY SSF47203 361 508 4.67E-23 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 SUPERFAMILY SSF56645 122 356 2.75E-42 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.4E-13 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 148 234 2.9E-16 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VAA_03548 18caa3d10cb293ebd52db3326d2e3df3 814 Gene3D G3DSA:1.20.140.10 361 508 4.2E-98 T 13-10-2018 VAA_01720 e98755240404e82390ab912b8a163026 347 SUPERFAMILY SSF53067 154 340 1.71E-51 T 13-10-2018 VAA_01720 e98755240404e82390ab912b8a163026 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_01720 e98755240404e82390ab912b8a163026 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_01720 e98755240404e82390ab912b8a163026 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_01720 e98755240404e82390ab912b8a163026 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_01720 e98755240404e82390ab912b8a163026 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_01720 e98755240404e82390ab912b8a163026 347 Pfam PF06723 MreB/Mbl protein 11 338 7.0E-148 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_01720 e98755240404e82390ab912b8a163026 347 Gene3D G3DSA:3.30.420.40 14 331 1.6E-131 T 13-10-2018 VAA_01720 e98755240404e82390ab912b8a163026 347 Gene3D G3DSA:3.90.640.10 190 263 1.6E-131 T 13-10-2018 VAA_01720 e98755240404e82390ab912b8a163026 347 Gene3D G3DSA:3.30.420.40 158 321 1.6E-131 T 13-10-2018 VAA_01720 e98755240404e82390ab912b8a163026 347 SUPERFAMILY SSF53067 9 152 6.31E-38 T 13-10-2018 VAA_01720 e98755240404e82390ab912b8a163026 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.9E-164 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VAA_02003 5b0ec66d1726218b0682185ed2827260 446 Gene3D G3DSA:3.30.565.10 309 445 2.2E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02003 5b0ec66d1726218b0682185ed2827260 446 SMART SM00387 340 446 1.9E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02003 5b0ec66d1726218b0682185ed2827260 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 441 4.4E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02003 5b0ec66d1726218b0682185ed2827260 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 5.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02003 5b0ec66d1726218b0682185ed2827260 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 5.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02003 5b0ec66d1726218b0682185ed2827260 446 Gene3D G3DSA:1.10.287.130 191 308 2.5E-6 T 13-10-2018 VAA_02003 5b0ec66d1726218b0682185ed2827260 446 SUPERFAMILY SSF55874 306 443 2.36E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02781 63a938904529b1852e6247e1e1442b8b 416 Gene3D G3DSA:1.10.3210.10 4 318 2.8E-55 T 13-10-2018 VAA_02781 63a938904529b1852e6247e1e1442b8b 416 SUPERFAMILY SSF109604 158 329 2.47E-27 T 13-10-2018 VAA_02781 63a938904529b1852e6247e1e1442b8b 416 SMART SM00471 163 299 1.6E-8 T 13-10-2018 IPR003607 HD/PDEase domain VAA_02781 63a938904529b1852e6247e1e1442b8b 416 TIGRFAM TIGR00277 HDIG: HDIG domain 165 258 3.2E-8 T 13-10-2018 IPR006675 HDIG domain VAA_02781 63a938904529b1852e6247e1e1442b8b 416 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 9.4E-34 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 VAA_02781 63a938904529b1852e6247e1e1442b8b 416 Pfam PF01966 HD domain 169 289 6.8E-15 T 13-10-2018 IPR006674 HD domain VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 392 479 5.1E-21 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 480 565 1.8E-22 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 34 130 5.9E-14 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SUPERFAMILY SSF49373 306 387 9.42E-8 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VAA_00173 210162c8d1866e078b623d7eae34029c 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 567 618 5.0E-7 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 481 562 1.4E-12 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 133 207 7.9E-10 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 394 475 2.8E-13 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 220 298 1.2E-10 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Pfam PF02368 Bacterial Ig-like domain (group 2) 307 379 9.8E-14 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SMART SM00635 219 300 2.7E-7 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SMART SM00635 393 474 2.2E-12 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SMART SM00635 132 213 1.7E-9 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SMART SM00635 306 387 1.3E-12 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SMART SM00635 480 561 8.5E-12 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SUPERFAMILY SSF49373 393 467 5.57E-7 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VAA_00173 210162c8d1866e078b623d7eae34029c 642 SUPERFAMILY SSF49373 480 562 7.53E-8 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 218 303 2.9E-20 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 304 391 1.2E-21 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 131 217 1.5E-20 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 Gene3D G3DSA:2.60.40.1080 566 623 8.5E-13 T 13-10-2018 VAA_00173 210162c8d1866e078b623d7eae34029c 642 SUPERFAMILY SSF49373 220 302 1.41E-6 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VAA_02339 833d7afbea46d29d75e023024fd96a63 631 Gene3D G3DSA:3.90.226.10 330 555 1.4E-161 T 13-10-2018 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 342 555 3.6E-53 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 Pfam PF01343 Peptidase family S49 153 307 2.4E-29 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 Pfam PF01343 Peptidase family S49 406 556 6.2E-47 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 31 623 4.0E-190 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 Gene3D G3DSA:3.40.1750.10 201 512 1.4E-161 T 13-10-2018 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 SUPERFAMILY SSF52096 334 544 3.62E-42 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_02339 833d7afbea46d29d75e023024fd96a63 631 SUPERFAMILY SSF52096 62 299 1.49E-26 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_02339 833d7afbea46d29d75e023024fd96a63 631 Gene3D G3DSA:3.90.226.10 109 329 1.4E-161 T 13-10-2018 VAA_02339 833d7afbea46d29d75e023024fd96a63 631 PIRSF PIRSF001217 23 631 7.1E-225 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VAA_02645 9012f294a685bf62bcf4412d882f77c6 580 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 39 293 2.5E-60 T 13-10-2018 IPR007817 Pyoverdine biosynthesis VAA_02645 9012f294a685bf62bcf4412d882f77c6 580 SUPERFAMILY SSF51197 469 541 7.78E-5 T 13-10-2018 VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 187 349 1.4E-65 T 13-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 SUPERFAMILY SSF54197 181 349 8.0E-54 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 SUPERFAMILY SSF54197 6 179 5.59E-72 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 5.1E-183 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 13-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 Gene3D G3DSA:3.30.428.10 46 177 5.8E-55 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 Gene3D G3DSA:3.30.428.10 178 350 6.7E-73 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 PIRSF PIRSF000808 2 345 1.4E-123 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAA_03651 5d0e17f778dfb4ef4f0f36916b27a073 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 4.0E-66 T 13-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 Gene3D G3DSA:1.20.1560.10 2 334 1.2E-50 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 Gene3D G3DSA:3.40.50.300 340 593 1.8E-65 T 13-10-2018 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 SMART SM00382 375 558 5.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.0E-178 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 SUPERFAMILY SSF52540 349 581 1.74E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 Pfam PF00005 ABC transporter 368 512 9.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 Pfam PF00664 ABC transporter transmembrane region 25 292 6.7E-43 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_02233 21cd34126dceadc65ec3179e9a3aac7d 595 SUPERFAMILY SSF90123 12 330 7.46E-55 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_1440 76d7d1a05eb5e15d5edeee90560528a7 565 SMART SM00304 233 287 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_1440 76d7d1a05eb5e15d5edeee90560528a7 565 SUPERFAMILY SSF58104 261 564 2.09E-70 T 13-10-2018 VAA_1440 76d7d1a05eb5e15d5edeee90560528a7 565 SMART SM00283 302 563 7.7E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_1440 76d7d1a05eb5e15d5edeee90560528a7 565 Pfam PF12729 Four helix bundle sensory module for signal transduction 27 193 3.6E-19 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAA_1440 76d7d1a05eb5e15d5edeee90560528a7 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 527 6.2E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_1440 76d7d1a05eb5e15d5edeee90560528a7 565 Gene3D G3DSA:1.10.287.950 233 565 1.4E-74 T 13-10-2018 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 357 2.0E-120 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 SUPERFAMILY SSF56796 7 359 3.53E-116 T 13-10-2018 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 Gene3D G3DSA:3.40.50.1970 1 175 2.1E-64 T 13-10-2018 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 4 359 72.9 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 PIRSF PIRSF001455 10 362 1.4E-109 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 Gene3D G3DSA:1.20.1090.10 176 365 4.5E-72 T 13-10-2018 VAA_02634 77b619fe32bfebb444d6390f32fa173d 365 Pfam PF01761 3-dehydroquinate synthase 71 328 1.1E-112 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VAA_01391 049ae12073f6c6fc483c51a5534bad05 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 5 171 1.8E-86 T 13-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VAA_01391 049ae12073f6c6fc483c51a5534bad05 176 PIRSF PIRSF004633 1 176 2.0E-75 T 13-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VAA_01391 049ae12073f6c6fc483c51a5534bad05 176 SUPERFAMILY SSF50475 12 162 3.07E-33 T 13-10-2018 VAA_01391 049ae12073f6c6fc483c51a5534bad05 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 2.5E-17 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01391 049ae12073f6c6fc483c51a5534bad05 176 Gene3D G3DSA:2.30.110.10 11 176 1.4E-54 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 1.0E-167 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 Gene3D G3DSA:3.90.1150.10 7 396 4.3E-164 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 4.4E-153 T 13-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 SUPERFAMILY SSF53383 2 400 4.79E-123 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 Pfam PF00266 Aminotransferase class-V 24 392 4.3E-150 T 13-10-2018 IPR000192 Aminotransferase class V domain VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 Gene3D G3DSA:3.40.640.10 35 295 4.3E-164 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_03628 a0761a9a7bdee33eec5d4e13e20d034a 403 PIRSF PIRSF005572 21 403 1.8E-55 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 Gene3D G3DSA:2.30.30.30 115 195 6.2E-32 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 SMART SM01382 124 252 5.2E-92 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 9.4E-34 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.6E-129 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 SMART SM01383 42 118 1.6E-46 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 SUPERFAMILY SSF50104 127 272 7.22E-61 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 3.6E-56 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 SUPERFAMILY SSF50249 2 125 6.51E-50 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 Gene3D G3DSA:2.40.50.140 1 114 1.5E-50 T 13-10-2018 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 PIRSF PIRSF002158 13 274 1.2E-99 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 Gene3D G3DSA:4.10.950.10 196 274 1.2E-36 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02673 0f96894dad346c7176afd5fc11d36f8b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.102 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 Gene3D G3DSA:3.40.190.10 221 306 2.2E-54 T 13-10-2018 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 Pfam PF01817 Chorismate mutase type II 40 119 4.0E-16 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 SUPERFAMILY SSF48600 35 123 1.15E-18 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 357 364 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 SUPERFAMILY SSF55021 312 409 6.02E-26 T 13-10-2018 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 Gene3D G3DSA:3.30.70.260 323 411 1.0E-24 T 13-10-2018 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 SMART SM00830 40 121 2.8E-21 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 37 119 2.1E-27 T 13-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 Gene3D G3DSA:1.20.59.10 30 140 4.5E-31 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 SUPERFAMILY SSF53850 137 323 1.04E-54 T 13-10-2018 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 Gene3D G3DSA:3.40.190.10 141 315 2.2E-54 T 13-10-2018 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 293 315 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 Pfam PF00800 Prephenate dehydratase 138 319 1.2E-59 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAA_00433 946cba0179a8f7fcfd4cc6a55b0c3cba 420 PIRSF PIRSF001500 29 412 1.5E-140 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VAA_00555 6efac79f6821db2e51faa7e49b620995 125 Pfam PF10625 Universal stress protein B (UspB) 19 122 1.0E-47 T 13-10-2018 IPR019598 Universal stress protein B VAA_00555 6efac79f6821db2e51faa7e49b620995 125 Hamap MF_01088 Universal stress protein B [uspB]. 19 125 34.986 T 13-10-2018 IPR019598 Universal stress protein B VAA_00335 5efca141e9735d831408f0afb1a01106 353 Pfam PF03193 RsgA GTPase 99 276 7.8E-56 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VAA_00335 5efca141e9735d831408f0afb1a01106 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 340 37.337 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VAA_00335 5efca141e9735d831408f0afb1a01106 353 SUPERFAMILY SSF52540 113 338 3.43E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00335 5efca141e9735d831408f0afb1a01106 353 Gene3D G3DSA:1.10.40.50 276 350 8.2E-25 T 13-10-2018 VAA_00335 5efca141e9735d831408f0afb1a01106 353 Gene3D G3DSA:2.40.50.140 35 101 1.4E-22 T 13-10-2018 VAA_00335 5efca141e9735d831408f0afb1a01106 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 3.3E-87 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VAA_00335 5efca141e9735d831408f0afb1a01106 353 Gene3D G3DSA:3.40.50.300 102 275 7.1E-49 T 13-10-2018 VAA_02643 3ef3272a703f1e9fb8133af311cc4490 297 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 24 280 3.7E-42 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VAA_02643 3ef3272a703f1e9fb8133af311cc4490 297 SUPERFAMILY SSF51197 27 282 1.51E-56 T 13-10-2018 VAA_02643 3ef3272a703f1e9fb8133af311cc4490 297 Gene3D G3DSA:3.60.130.10 6 296 2.1E-89 T 13-10-2018 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.6E-88 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.6E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.0E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 SUPERFAMILY SSF48150 6 208 2.04E-70 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 Gene3D G3DSA:1.10.340.30 21 132 4.3E-77 T 13-10-2018 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 PIRSF PIRSF001435 1 210 8.6E-51 T 13-10-2018 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 SMART SM00478 38 185 1.4E-50 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 SMART SM00525 186 206 3.7E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 Gene3D G3DSA:1.10.1670.10 11 203 4.3E-77 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.1E-8 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VAA_02087 c714b3fbd037bf90691afa6a57bd4449 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.609 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Gene3D G3DSA:3.40.50.2300 5 139 2.4E-33 T 13-10-2018 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Pfam PF00158 Sigma-54 interaction domain 148 314 5.3E-42 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Gene3D G3DSA:1.10.10.60 418 461 7.9E-10 T 13-10-2018 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 SUPERFAMILY SSF46689 420 464 2.0E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 SUPERFAMILY SSF52540 147 391 8.24E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.5E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 SMART SM00448 11 122 1.0E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Gene3D G3DSA:3.40.50.300 145 243 3.6E-22 T 13-10-2018 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Gene3D G3DSA:3.40.50.300 256 319 3.6E-16 T 13-10-2018 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 SUPERFAMILY SSF52172 13 191 4.98E-41 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Pfam PF00072 Response regulator receiver domain 14 122 9.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02385 8cce0a748479bdb7659aba02d46dcbd8 469 Gene3D G3DSA:1.10.8.60 320 400 3.6E-22 T 13-10-2018 VAA_01950 9056796fc5d4bc5c4d678ced0d2578b1 253 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 223 1.6E-30 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01950 9056796fc5d4bc5c4d678ced0d2578b1 253 Gene3D G3DSA:3.40.50.10090 4 233 2.2E-63 T 13-10-2018 VAA_01950 9056796fc5d4bc5c4d678ced0d2578b1 253 SUPERFAMILY SSF69618 1 241 2.09E-49 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01950 9056796fc5d4bc5c4d678ced0d2578b1 253 Gene3D G3DSA:3.40.50.10090 34 158 2.2E-63 T 13-10-2018 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PIRSF PIRSF002097 1 98 4.2E-44 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 SUPERFAMILY SSF46689 8 98 2.02E-24 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.1 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 1.2E-30 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 1.2E-30 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 1.2E-30 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 1.2E-30 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02540 ab4bc9522e350c6723383ec02fb60f59 98 Gene3D G3DSA:1.10.10.60 1 98 5.8E-32 T 13-10-2018 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00259 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01091 1dc6b849abd48b4cf65221009fe7ff3f 506 Gene3D G3DSA:3.60.110.10 214 479 1.1E-15 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAA_01091 1dc6b849abd48b4cf65221009fe7ff3f 506 SUPERFAMILY SSF56317 215 485 4.19E-41 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAA_01091 1dc6b849abd48b4cf65221009fe7ff3f 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 2.3E-97 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VAA_01091 1dc6b849abd48b4cf65221009fe7ff3f 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.4 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VAA_01091 1dc6b849abd48b4cf65221009fe7ff3f 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 473 5.8E-39 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VAA_03076 d6b5a6f6ef9dee77e2705ee397664453 195 Pfam PF07209 Protein of unknown function (DUF1415) 17 184 7.8E-65 T 13-10-2018 IPR009858 Protein of unknown function DUF1415 VAA_01265 45777e2898566e821bee2a202e5d8b34 391 SUPERFAMILY SSF55073 197 362 3.45E-44 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01265 45777e2898566e821bee2a202e5d8b34 391 Gene3D G3DSA:3.30.70.270 187 375 7.8E-51 T 13-10-2018 VAA_01265 45777e2898566e821bee2a202e5d8b34 391 SMART SM00267 181 361 1.2E-52 T 13-10-2018 IPR000160 GGDEF domain VAA_01265 45777e2898566e821bee2a202e5d8b34 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 357 1.8E-42 T 13-10-2018 IPR000160 GGDEF domain VAA_01265 45777e2898566e821bee2a202e5d8b34 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 360 4.0E-42 T 13-10-2018 IPR000160 GGDEF domain VAA_01537 428009f223e0f6688465cc825e268355 549 SUPERFAMILY SSF51905 9 372 2.49E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01537 428009f223e0f6688465cc825e268355 549 Gene3D G3DSA:3.30.9.10 86 318 3.5E-77 T 13-10-2018 VAA_01537 428009f223e0f6688465cc825e268355 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 4.1E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01537 428009f223e0f6688465cc825e268355 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 4.1E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01537 428009f223e0f6688465cc825e268355 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.1E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01537 428009f223e0f6688465cc825e268355 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 4.1E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01537 428009f223e0f6688465cc825e268355 549 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 4.1E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01537 428009f223e0f6688465cc825e268355 549 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01537 428009f223e0f6688465cc825e268355 549 Gene3D G3DSA:1.10.10.1100 418 490 1.2E-19 T 13-10-2018 VAA_01537 428009f223e0f6688465cc825e268355 549 Pfam PF01266 FAD dependent oxidoreductase 10 359 3.5E-48 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAA_01537 428009f223e0f6688465cc825e268355 549 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 538 9.0E-266 T 13-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAA_01537 428009f223e0f6688465cc825e268355 549 Gene3D G3DSA:3.50.50.60 10 366 3.5E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01537 428009f223e0f6688465cc825e268355 549 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 483 2.0E-10 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VAA_01537 428009f223e0f6688465cc825e268355 549 SUPERFAMILY SSF54373 226 317 7.59E-12 T 13-10-2018 VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 Pfam PF13360 PQQ-like domain 77 311 3.0E-55 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 383 5.5E-137 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 Gene3D G3DSA:2.130.10.10 19 387 9.0E-100 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SUPERFAMILY SSF50998 41 376 9.61E-83 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 4 385 40.895 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 323 354 13.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 148 179 0.014 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 282 313 10.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 109 139 0.0079 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 64 95 2.1E-5 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 243 275 17.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_00505 07c102ba18f63f378015b9e2de682dc3 387 SMART SM00564 193 224 87.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VAA_03443 699021a57e972999c39680d3ac9f7750 376 SUPERFAMILY SSF160544 250 355 5.49E-39 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VAA_03443 699021a57e972999c39680d3ac9f7750 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.9E-121 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAA_03443 699021a57e972999c39680d3ac9f7750 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 4.6E-133 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VAA_03443 699021a57e972999c39680d3ac9f7750 376 Gene3D G3DSA:3.40.1690.10 218 359 3.4E-56 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VAA_03443 699021a57e972999c39680d3ac9f7750 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.3E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAA_03443 699021a57e972999c39680d3ac9f7750 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.3E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAA_03443 699021a57e972999c39680d3ac9f7750 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.3E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAA_03443 699021a57e972999c39680d3ac9f7750 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.3E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAA_03443 699021a57e972999c39680d3ac9f7750 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.3E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VAA_00084 ab3b165582c50b3ab1b9ea75916c6ba9 411 Gene3D G3DSA:1.10.443.10 211 389 1.8E-20 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00084 ab3b165582c50b3ab1b9ea75916c6ba9 411 Gene3D G3DSA:1.10.150.130 97 210 1.0E-27 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00084 ab3b165582c50b3ab1b9ea75916c6ba9 411 SUPERFAMILY SSF56349 103 383 4.71E-58 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00084 ab3b165582c50b3ab1b9ea75916c6ba9 411 Gene3D G3DSA:3.30.160.390 3 92 1.6E-27 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAA_00084 ab3b165582c50b3ab1b9ea75916c6ba9 411 Pfam PF13356 Arm DNA-binding domain 5 91 6.6E-20 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VAA_00084 ab3b165582c50b3ab1b9ea75916c6ba9 411 Pfam PF00589 Phage integrase family 210 373 1.8E-25 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_03522 bc0822802053b4eae271b34f04028868 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAA_03522 bc0822802053b4eae271b34f04028868 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.3E-12 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAA_03522 bc0822802053b4eae271b34f04028868 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VAA_03522 bc0822802053b4eae271b34f04028868 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 6.2E-52 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VAA_01317 97e799b585423bf897d12556ea31e59d 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_01317 97e799b585423bf897d12556ea31e59d 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 8.5E-73 T 13-10-2018 VAA_01317 97e799b585423bf897d12556ea31e59d 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 0.0015 T 13-10-2018 VAA_01317 97e799b585423bf897d12556ea31e59d 252 Gene3D G3DSA:3.40.50.720 1 248 7.3E-83 T 13-10-2018 VAA_01317 97e799b585423bf897d12556ea31e59d 252 SUPERFAMILY SSF51735 6 244 1.93E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.0E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.0E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.0E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.0E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01317 97e799b585423bf897d12556ea31e59d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.0E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01861 7566e34eaf8e617ef0c84fff141b1815 82 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 74 2.9E-19 T 13-10-2018 IPR008554 Glutaredoxin-like VAA_01861 7566e34eaf8e617ef0c84fff141b1815 82 Gene3D G3DSA:3.40.30.10 3 82 1.2E-21 T 13-10-2018 VAA_01861 7566e34eaf8e617ef0c84fff141b1815 82 SUPERFAMILY SSF52833 4 75 1.58E-13 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00721 09f543a7af36c4b9db2cb1c3f6dc2ddf 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.783 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00721 09f543a7af36c4b9db2cb1c3f6dc2ddf 82 Pfam PF00886 Ribosomal protein S16 8 68 6.2E-23 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00721 09f543a7af36c4b9db2cb1c3f6dc2ddf 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00721 09f543a7af36c4b9db2cb1c3f6dc2ddf 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.9E-26 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00721 09f543a7af36c4b9db2cb1c3f6dc2ddf 82 SUPERFAMILY SSF54565 1 76 1.7E-27 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00721 09f543a7af36c4b9db2cb1c3f6dc2ddf 82 Gene3D G3DSA:3.30.1320.10 1 82 1.0E-30 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 Pfam PF08323 Starch synthase catalytic domain 6 236 5.3E-66 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 Gene3D G3DSA:3.40.50.2000 6 479 1.9E-155 T 13-10-2018 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 SUPERFAMILY SSF53756 7 483 4.89E-111 T 13-10-2018 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 Pfam PF00534 Glycosyl transferases group 1 298 442 1.9E-14 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 Gene3D G3DSA:3.40.50.2000 254 465 1.9E-155 T 13-10-2018 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 6 479 3.5E-154 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VAA_02176 91c298d5bbf307a797c84b6714204baf 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 40.22 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 SMART SM00304 254 306 1.0E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 SUPERFAMILY SSF55874 379 531 1.96E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 Pfam PF00512 His Kinase A (phospho-acceptor) domain 307 369 2.6E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 SMART SM00387 419 531 7.0E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 SUPERFAMILY SSF47384 290 371 2.35E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 Gene3D G3DSA:3.30.565.10 379 530 5.5E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 529 6.6E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 3.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 3.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 3.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 Gene3D G3DSA:1.10.287.130 258 373 1.2E-22 T 13-10-2018 VAA_01138 697047c0ac46a7d1ff7f419a8ba33a92 544 SMART SM00388 307 373 3.7E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 SMART SM00387 386 481 1.4E-4 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 Pfam PF14501 GHKL domain 390 477 6.9E-6 T 13-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 Gene3D G3DSA:1.10.287.130 292 348 3.3E-14 T 13-10-2018 VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 Pfam PF11884 Domain of unknown function (DUF3404) 22 286 1.3E-89 T 13-10-2018 IPR021821 Protein of unknown function DUF3404 VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 SUPERFAMILY SSF55874 361 475 1.96E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 SUPERFAMILY SSF47384 270 340 6.87E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02827 e82260168a1ebf9b153e2eee734a5eb8 481 Gene3D G3DSA:3.30.565.10 349 474 3.3E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.252 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 385 2.7E-10 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Gene3D G3DSA:3.40.1190.10 91 313 4.7E-57 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Pfam PF08245 Mur ligase middle domain 108 291 2.2E-21 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 SUPERFAMILY SSF53623 97 308 5.63E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 2.9E-20 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Gene3D G3DSA:3.90.190.20 314 449 7.1E-31 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 Gene3D G3DSA:3.40.50.720 1 90 1.8E-36 T 13-10-2018 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 SUPERFAMILY SSF51984 1 89 1.19E-23 T 13-10-2018 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 SUPERFAMILY SSF53244 311 445 1.96E-38 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_02727 7f482c47a1262ca5484a66d42d71ed67 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 2.8E-262 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 Gene3D G3DSA:3.40.190.10 129 318 1.4E-119 T 13-10-2018 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 SUPERFAMILY SSF53850 24 342 5.43E-94 T 13-10-2018 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 7.2E-85 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 5.7E-43 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 Gene3D G3DSA:3.40.190.10 29 312 1.4E-119 T 13-10-2018 VAA_01831 879c60c2b5cefc3e41a519643e2eb330 345 PIRSF PIRSF019574 1 345 2.5E-123 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01792 45174d8b9d7b4bff327a32a4302ae1ad 376 Gene3D G3DSA:2.60.120.10 66 168 1.3E-12 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01792 45174d8b9d7b4bff327a32a4302ae1ad 376 Pfam PF04209 homogentisate 1,2-dioxygenase 90 374 1.6E-23 T 13-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VAA_01792 45174d8b9d7b4bff327a32a4302ae1ad 376 SUPERFAMILY SSF51182 63 374 4.45E-91 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 Hamap MF_01987 Ribokinase [rbsK]. 8 307 25.909 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 Gene3D G3DSA:3.40.1190.20 6 306 3.1E-103 T 13-10-2018 IPR029056 Ribokinase-like VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 11 305 1.2E-108 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 Pfam PF00294 pfkB family carbohydrate kinase 7 300 1.5E-75 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 PRINTS PR00990 Ribokinase signature 39 58 4.0E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 PRINTS PR00990 Ribokinase signature 111 124 4.0E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 PRINTS PR00990 Ribokinase signature 179 194 4.0E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 PRINTS PR00990 Ribokinase signature 12 33 4.0E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 PRINTS PR00990 Ribokinase signature 223 234 4.0E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VAA_04313 92ddd4f1f72a9ce681400bb973ebd95f 312 SUPERFAMILY SSF53613 7 308 8.73E-83 T 13-10-2018 IPR029056 Ribokinase-like VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 197 216 3.5E-25 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 182 191 3.5E-25 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 123 135 3.5E-25 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 222 231 3.5E-25 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 145 3.5E-25 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 287 295 3.5E-25 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 SUPERFAMILY SSF63380 93 188 1.6E-23 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 Gene3D G3DSA:3.10.20.30 1 89 2.3E-14 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 Pfam PF00175 Oxidoreductase NAD-binding domain 198 301 1.2E-20 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 SUPERFAMILY SSF52343 190 321 1.83E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 138 145 3.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 197 216 3.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 222 231 3.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 295 3.7E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 Gene3D G3DSA:2.40.30.10 90 185 3.3E-25 T 13-10-2018 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 SUPERFAMILY SSF54292 3 89 1.84E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 72 1.1E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 Gene3D G3DSA:3.40.50.80 190 320 1.3E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_02487 87a1b51c98bf57139a931b74b64206f7 323 Pfam PF00970 Oxidoreductase FAD-binding domain 96 187 1.4E-21 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAA_01342 1712bb032b52fea44800e989421b18fd 335 SMART SM00354 1 71 4.3E-29 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01342 1712bb032b52fea44800e989421b18fd 335 SUPERFAMILY SSF53822 61 330 3.93E-83 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01342 1712bb032b52fea44800e989421b18fd 335 Gene3D G3DSA:3.40.50.2300 56 306 1.8E-80 T 13-10-2018 VAA_01342 1712bb032b52fea44800e989421b18fd 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.4E-35 T 13-10-2018 VAA_01342 1712bb032b52fea44800e989421b18fd 335 Gene3D G3DSA:1.10.260.40 1 55 5.1E-23 T 13-10-2018 VAA_01342 1712bb032b52fea44800e989421b18fd 335 SUPERFAMILY SSF47413 2 59 2.15E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01342 1712bb032b52fea44800e989421b18fd 335 Gene3D G3DSA:3.40.50.2300 160 289 1.8E-80 T 13-10-2018 VAA_01342 1712bb032b52fea44800e989421b18fd 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.9E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01342 1712bb032b52fea44800e989421b18fd 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.9E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01342 1712bb032b52fea44800e989421b18fd 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.4E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 PIRSF PIRSF000379 5 758 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 Pfam PF01228 Glycine radical 628 739 2.3E-43 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 SUPERFAMILY SSF51998 4 757 4.58E-289 T 13-10-2018 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 Pfam PF02901 Pyruvate formate lyase-like 20 612 3.7E-205 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 13-10-2018 VAA_03184 98d79dd1ba2e55fddecf6972a6b6f80b 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VAA_02142 d34cb7c59e81d06274328fadc2b1adec 301 Gene3D G3DSA:3.10.310.20 187 300 4.1E-23 T 13-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAA_02142 d34cb7c59e81d06274328fadc2b1adec 301 Gene3D G3DSA:3.90.1640.10 1 185 1.6E-62 T 13-10-2018 VAA_02142 d34cb7c59e81d06274328fadc2b1adec 301 SUPERFAMILY SSF64182 1 298 1.44E-66 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VAA_02142 d34cb7c59e81d06274328fadc2b1adec 301 SMART SM01131 178 300 8.5E-35 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAA_02142 d34cb7c59e81d06274328fadc2b1adec 301 Pfam PF02833 DHHA2 domain 180 297 1.5E-15 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAA_02142 d34cb7c59e81d06274328fadc2b1adec 301 Pfam PF01368 DHH family 2 142 5.4E-21 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAA_01214 f44826bed2ab8a0f13528c9569aaba2b 306 SUPERFAMILY SSF52980 163 284 2.52E-14 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_01214 f44826bed2ab8a0f13528c9569aaba2b 306 Pfam PF04471 Restriction endonuclease 159 280 3.5E-32 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VAA_01214 f44826bed2ab8a0f13528c9569aaba2b 306 Pfam PF14338 Mrr N-terminal domain 5 91 6.4E-31 T 13-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain VAA_01214 f44826bed2ab8a0f13528c9569aaba2b 306 Gene3D G3DSA:3.40.91.100 136 299 4.3E-8 T 13-10-2018 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 563 9.0E-4 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 270 9.3E-6 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 Pfam PF00005 ABC transporter 24 181 4.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 SUPERFAMILY SSF52540 3 253 1.33E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00594 75bdc45ac92aed066c10872fed32730e 571 SUPERFAMILY SSF52540 303 553 6.58E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00594 75bdc45ac92aed066c10872fed32730e 571 SMART SM00382 32 231 4.2E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00594 75bdc45ac92aed066c10872fed32730e 571 SMART SM00382 338 534 1.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00594 75bdc45ac92aed066c10872fed32730e 571 Gene3D G3DSA:3.40.50.300 1 289 2.8E-85 T 13-10-2018 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 Gene3D G3DSA:3.40.50.300 300 569 5.3E-86 T 13-10-2018 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00594 75bdc45ac92aed066c10872fed32730e 571 Pfam PF00005 ABC transporter 330 483 1.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:3.40.50.300 542 781 1.9E-236 T 13-10-2018 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SMART SM01058 479 576 4.7E-52 T 13-10-2018 IPR003711 CarD-like/TRCF domain VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:3.30.2060.10 130 215 2.7E-122 T 13-10-2018 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SUPERFAMILY SSF143517 995 1146 4.32E-42 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 2.1E-44 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1109 27.931 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 1.4E-25 T 13-10-2018 IPR003711 CarD-like/TRCF domain VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SUPERFAMILY SSF52540 351 466 4.51E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SMART SM00487 600 790 2.4E-33 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SMART SM00490 826 910 3.5E-19 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Pfam PF03461 TRCF domain 1010 1100 1.0E-27 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SUPERFAMILY SSF52540 15 345 1.75E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SUPERFAMILY SSF141259 470 548 1.44E-24 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SUPERFAMILY SSF52540 523 783 2.9E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:3.40.50.11180 26 334 2.7E-122 T 13-10-2018 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:2.30.30.840 483 541 1.9E-236 T 13-10-2018 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:3.40.50.11140 355 453 2.3E-34 T 13-10-2018 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SUPERFAMILY SSF52540 782 990 6.01E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1082 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Pfam PF00271 Helicase conserved C-terminal domain 805 909 5.7E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 3.4E-21 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 Gene3D G3DSA:3.40.50.300 478 990 1.9E-236 T 13-10-2018 VAA_03207 dc5017bea37dedf38adfd4a5c624c2ed 1153 SMART SM00982 1008 1108 3.7E-46 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VAA_03366 050d524810d226e35a930dcae3caf71c 650 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VAA_03366 050d524810d226e35a930dcae3caf71c 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.4E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.4E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.4E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.4E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.4E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 Gene3D G3DSA:2.70.20.10 218 493 1.3E-162 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VAA_03366 050d524810d226e35a930dcae3caf71c 650 Pfam PF01131 DNA topoisomerase 159 598 4.1E-111 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 SMART SM00436 129 224 1.3E-30 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 640 1.8E-236 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 SMART SM00493 2 125 8.4E-27 T 13-10-2018 IPR006171 TOPRIM domain VAA_03366 050d524810d226e35a930dcae3caf71c 650 SUPERFAMILY SSF56712 3 612 6.67E-181 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VAA_03366 050d524810d226e35a930dcae3caf71c 650 Gene3D G3DSA:3.40.50.140 2 157 4.2E-59 T 13-10-2018 VAA_03366 050d524810d226e35a930dcae3caf71c 650 Pfam PF01751 Toprim domain 4 127 7.2E-16 T 13-10-2018 IPR006171 TOPRIM domain VAA_03366 050d524810d226e35a930dcae3caf71c 650 Gene3D G3DSA:1.10.290.10 293 422 1.3E-162 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VAA_03366 050d524810d226e35a930dcae3caf71c 650 SMART SM00437 284 563 2.2E-86 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VAA_03366 050d524810d226e35a930dcae3caf71c 650 Gene3D G3DSA:1.10.460.10 163 607 1.3E-162 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VAA_03366 050d524810d226e35a930dcae3caf71c 650 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 65.279 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Gene3D G3DSA:1.10.730.10 394 531 1.0E-34 T 13-10-2018 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 5.5E-201 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Gene3D G3DSA:2.20.28.20 147 181 4.4E-161 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 SUPERFAMILY SSF50249 586 687 3.18E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Gene3D G3DSA:3.40.50.620 14 389 4.4E-161 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.344 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 SUPERFAMILY SSF47323 394 552 1.25E-44 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Gene3D G3DSA:2.40.50.140 577 688 7.9E-36 T 13-10-2018 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Pfam PF01588 Putative tRNA binding domain 593 685 2.2E-26 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 SUPERFAMILY SSF57770 147 181 5.89E-13 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 Pfam PF09334 tRNA synthetases class I (M) 14 401 3.5E-165 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 5.6E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 5.6E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 5.6E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 5.6E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 5.6E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 5.6E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 548 687 1.4E-46 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VAA_02371 43b168dbdf7fa08c36560997c96bd3b1 688 SUPERFAMILY SSF52374 11 392 1.15E-100 T 13-10-2018 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 SMART SM00562 3 140 1.8E-90 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.7E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.7E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.7E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.7E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.7E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.2E-58 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 SUPERFAMILY SSF54919 1 140 3.4E-61 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 Gene3D G3DSA:3.30.70.141 1 141 8.8E-61 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_00511 2fd5e0dccf366a54d97f8b2d8de30ffb 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.305 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 PRINTS PR00834 HtrA/DegQ protease family signature 192 209 5.9E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 PRINTS PR00834 HtrA/DegQ protease family signature 302 314 5.9E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 5.9E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 PRINTS PR00834 HtrA/DegQ protease family signature 157 181 5.9E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 PRINTS PR00834 HtrA/DegQ protease family signature 96 108 5.9E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 PRINTS PR00834 HtrA/DegQ protease family signature 117 137 5.9E-46 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 SUPERFAMILY SSF50156 245 352 9.46E-21 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 SUPERFAMILY SSF50494 51 259 1.02E-59 T 13-10-2018 IPR009003 Peptidase S1, PA clan VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 SMART SM00228 262 344 1.6E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 Gene3D G3DSA:2.30.42.10 262 357 2.5E-23 T 13-10-2018 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 Pfam PF13180 PDZ domain 262 352 6.5E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 7 356 2.3E-165 T 13-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 Pfam PF13365 Trypsin-like peptidase domain 87 221 4.5E-32 T 13-10-2018 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 Gene3D G3DSA:2.40.10.10 149 261 4.8E-37 T 13-10-2018 VAA_03742 f7588ccf2336ff3f3515a30d2c72bca2 359 Gene3D G3DSA:2.40.10.10 36 147 5.2E-31 T 13-10-2018 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PIRSF PIRSF001480 10 402 2.5E-101 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 Gene3D G3DSA:2.60.120.10 17 288 8.0E-132 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02033 79a10b519335d579e1258490a41ca5f8 402 Pfam PF01238 Phosphomannose isomerase type I 13 367 4.4E-84 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 SUPERFAMILY SSF51182 10 392 4.69E-104 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_02033 79a10b519335d579e1258490a41ca5f8 402 Gene3D G3DSA:1.10.441.10 160 313 8.0E-132 T 13-10-2018 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 136 144 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 268 293 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 12 392 1.7E-89 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 Gene3D G3DSA:2.60.120.10 314 393 8.0E-132 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 233 248 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 91 112 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 249 268 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 15 33 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 136 159 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 43 58 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 287 306 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_02033 79a10b519335d579e1258490a41ca5f8 402 PRINTS PR00714 Phosphomannose isomerase type I signature 268 287 1.1E-66 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VAA_01216 0a87bc8def04075bff3a11de1260f67f 537 TIGRFAM TIGR04141 TIGR04141: sporadically distributed protein, TIGR04141 family 12 521 3.6E-166 T 13-10-2018 IPR026487 Sporadically distributed protein CHP04141 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 812 833 - T 13-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 SUPERFAMILY SSF53383 73 496 2.09E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 563 924 2.3E-63 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Gene3D G3DSA:1.20.1650.10 495 593 1.6E-41 T 13-10-2018 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Gene3D G3DSA:3.40.640.10 119 387 2.2E-130 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Gene3D G3DSA:3.90.1150.10 594 982 4.3E-137 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 67 497 1.1E-156 T 13-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 SUPERFAMILY SSF53383 541 991 8.25E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Gene3D G3DSA:3.40.640.10 608 876 4.3E-137 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Gene3D G3DSA:3.90.1150.10 71 493 2.2E-130 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01990 2d02174ab119bb28dd5e67c82ad21b55 994 Pfam PF00202 Aminotransferase class-III 83 496 1.5E-91 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_03463 2163251cceb27559db152e06a9ed4981 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.3E-23 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VAA_03463 2163251cceb27559db152e06a9ed4981 136 SUPERFAMILY SSF101116 6 127 4.71E-39 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VAA_03463 2163251cceb27559db152e06a9ed4981 136 PIRSF PIRSF039090 1 133 1.4E-43 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VAA_03463 2163251cceb27559db152e06a9ed4981 136 Pfam PF02561 Flagellar protein FliS 6 122 6.2E-38 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VAA_03463 2163251cceb27559db152e06a9ed4981 136 Gene3D G3DSA:1.20.120.340 2 126 3.6E-40 T 13-10-2018 VAA_01033 cfafaa711ef6137b59f48cd34cca975f 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 6 170 5.5E-74 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 VAA_01033 cfafaa711ef6137b59f48cd34cca975f 187 PIRSF PIRSF038321 1 181 7.1E-85 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 VAA_01033 cfafaa711ef6137b59f48cd34cca975f 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 179 6.1E-90 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 VAA_01190 7d123e164b3df306c0423783584f691e 345 Pfam PF03806 AbgT putative transporter family 23 342 2.3E-126 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 5.0E-8 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 1.6E-35 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 PIRSF PIRSF000770 4 284 7.6E-33 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 Gene3D G3DSA:1.20.140.160 131 283 5.0E-15 T 13-10-2018 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 SUPERFAMILY SSF88946 11 122 1.43E-39 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 SUPERFAMILY SSF88659 198 282 1.51E-19 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.928 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 Pfam PF04545 Sigma-70, region 4 229 279 1.0E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 8.6E-127 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 Gene3D G3DSA:1.20.120.1810 3 122 7.0E-27 T 13-10-2018 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 3.4E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.4E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 3.4E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00451 fd5bc50f19820e96bcdf9197b592c93f 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.4E-19 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 Gene3D G3DSA:1.10.287.950 245 431 1.1E-46 T 13-10-2018 VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SUPERFAMILY SSF55785 30 131 6.46E-23 T 13-10-2018 IPR035965 PAS domain superfamily VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 Pfam PF13426 PAS domain 33 133 4.1E-12 T 13-10-2018 IPR000014 PAS domain VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 Pfam PF13426 PAS domain 155 253 2.4E-9 T 13-10-2018 IPR000014 PAS domain VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SMART SM00283 243 431 1.4E-18 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 137 2.0E-9 T 13-10-2018 IPR000014 PAS domain VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 259 2.5E-14 T 13-10-2018 IPR000014 PAS domain VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SUPERFAMILY SSF55785 152 254 3.38E-20 T 13-10-2018 IPR035965 PAS domain superfamily VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SMART SM00091 17 87 14.0 T 13-10-2018 IPR000014 PAS domain VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SMART SM00091 139 207 1.6 T 13-10-2018 IPR000014 PAS domain VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SMART SM00086 92 134 0.076 T 13-10-2018 IPR001610 PAC motif VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SMART SM00086 212 254 0.032 T 13-10-2018 IPR001610 PAC motif VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 288 429 5.1E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 Gene3D G3DSA:3.30.450.20 125 244 1.8E-18 T 13-10-2018 VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 Gene3D G3DSA:3.30.450.20 12 124 1.4E-19 T 13-10-2018 VAA_03102 883486a775571094ec0e07b5eb2c5c32 431 SUPERFAMILY SSF58104 245 429 6.15E-48 T 13-10-2018 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 6 173 1.5E-44 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 Gene3D G3DSA:1.10.1140.10 176 291 3.7E-54 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 164 173 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 Gene3D G3DSA:3.40.50.300 3 175 1.0E-66 T 13-10-2018 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 SUPERFAMILY SSF47917 176 290 2.07E-51 T 13-10-2018 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 291 6.8E-160 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VAA_00825 516e51c7ce4986a962a0ae62cc044968 291 SUPERFAMILY SSF52540 6 179 1.54E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02821 ad14d40238b3ce3a683d74a7efb29cc3 204 Gene3D G3DSA:3.40.30.10 1 82 7.7E-35 T 13-10-2018 VAA_02821 ad14d40238b3ce3a683d74a7efb29cc3 204 Pfam PF14497 Glutathione S-transferase, C-terminal domain 127 196 5.2E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAA_02821 ad14d40238b3ce3a683d74a7efb29cc3 204 Gene3D G3DSA:1.20.1050.10 83 197 4.0E-33 T 13-10-2018 VAA_02821 ad14d40238b3ce3a683d74a7efb29cc3 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 2.5E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAA_02821 ad14d40238b3ce3a683d74a7efb29cc3 204 SUPERFAMILY SSF47616 72 197 7.1E-19 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAA_02821 ad14d40238b3ce3a683d74a7efb29cc3 204 SUPERFAMILY SSF52833 1 78 2.29E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00431 f59c207e2344900fe075039d13634734 783 Gene3D G3DSA:3.30.70.270 336 520 2.2E-48 T 13-10-2018 VAA_00431 f59c207e2344900fe075039d13634734 783 SUPERFAMILY SSF158472 281 330 6.93E-5 T 13-10-2018 VAA_00431 f59c207e2344900fe075039d13634734 783 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 2.8E-34 T 13-10-2018 IPR000160 GGDEF domain VAA_00431 f59c207e2344900fe075039d13634734 783 Pfam PF00563 EAL domain 523 755 6.6E-61 T 13-10-2018 IPR001633 EAL domain VAA_00431 f59c207e2344900fe075039d13634734 783 Gene3D G3DSA:3.20.20.450 521 780 2.4E-73 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00431 f59c207e2344900fe075039d13634734 783 Gene3D G3DSA:1.20.1480.50 245 335 5.4E-6 T 13-10-2018 VAA_00431 f59c207e2344900fe075039d13634734 783 SUPERFAMILY SSF55073 344 509 4.39E-38 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00431 f59c207e2344900fe075039d13634734 783 SMART SM00052 517 760 3.6E-68 T 13-10-2018 IPR001633 EAL domain VAA_00431 f59c207e2344900fe075039d13634734 783 SMART SM00267 328 507 5.8E-44 T 13-10-2018 IPR000160 GGDEF domain VAA_00431 f59c207e2344900fe075039d13634734 783 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 503 9.0E-42 T 13-10-2018 IPR000160 GGDEF domain VAA_00431 f59c207e2344900fe075039d13634734 783 SUPERFAMILY SSF141868 522 769 1.57E-68 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00188 61989aef5c664b592d08e6f56cc5ab53 651 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 634 651 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site VAA_00188 61989aef5c664b592d08e6f56cc5ab53 651 SUPERFAMILY SSF56935 32 651 1.72E-123 T 13-10-2018 VAA_00188 61989aef5c664b592d08e6f56cc5ab53 651 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 155 1.5E-27 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VAA_00188 61989aef5c664b592d08e6f56cc5ab53 651 Gene3D G3DSA:2.170.130.10 31 160 2.1E-40 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAA_00188 61989aef5c664b592d08e6f56cc5ab53 651 Gene3D G3DSA:2.40.170.20 166 651 7.5E-136 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAA_00188 61989aef5c664b592d08e6f56cc5ab53 651 Pfam PF00593 TonB dependent receptor 179 649 4.1E-56 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 SUPERFAMILY SSF48029 131 342 1.44E-66 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 Pfam PF01706 FliG C-terminal domain 235 341 3.0E-41 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 Pfam PF14842 FliG N-terminal domain 22 122 1.8E-27 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 Gene3D G3DSA:1.10.220.30 16 101 9.4E-18 T 13-10-2018 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 Gene3D G3DSA:1.10.220.30 212 349 7.5E-43 T 13-10-2018 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 Gene3D G3DSA:1.10.220.30 105 210 5.8E-28 T 13-10-2018 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 Pfam PF14841 FliG middle domain 132 204 9.6E-25 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 SUPERFAMILY SSF48029 24 134 1.23E-19 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PIRSF PIRSF003161 16 349 6.0E-111 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 131 154 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 243 263 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 51 77 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 212 237 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 22 38 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 265 285 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 289 315 1.6E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_03456 7ae8266ba0fb519bf9ba537f87eb7598 349 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 18 347 1.1E-93 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VAA_00639 85bec154e82978f8b032d6dbf0e5c002 233 Gene3D G3DSA:3.40.50.2020 116 232 2.8E-17 T 13-10-2018 VAA_00639 85bec154e82978f8b032d6dbf0e5c002 233 SUPERFAMILY SSF53271 54 231 9.96E-37 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_00639 85bec154e82978f8b032d6dbf0e5c002 233 Pfam PF00156 Phosphoribosyl transferase domain 136 230 7.7E-12 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 SUPERFAMILY SSF55681 71 268 1.39E-58 T 13-10-2018 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Gene3D G3DSA:2.30.30.100 271 313 3.9E-18 T 13-10-2018 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 SUPERFAMILY SSF46785 6 60 1.49E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Gene3D G3DSA:1.10.10.10 1 64 8.6E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 3.6E-68 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 SUPERFAMILY SSF50037 271 317 3.8E-10 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Gene3D G3DSA:3.30.930.10 66 270 5.2E-65 T 13-10-2018 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 2.9E-10 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 207 7.5E-20 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.84 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VAA_00048 7f5da6a419b13dfafba52d7720dded9c 320 Pfam PF08279 HTH domain 9 59 2.7E-10 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Gene3D G3DSA:3.90.199.10 34 483 2.6E-177 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 SMART SM00434 13 463 2.1E-228 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 680 5.3E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.032 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 547 588 2.9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Gene3D G3DSA:3.30.1360.40 240 333 2.6E-177 T 13-10-2018 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.604 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Gene3D G3DSA:2.120.10.90 502 747 9.3E-16 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAA_03743 b10833ea43f477897322d9b445b6bc76 758 SUPERFAMILY SSF56719 33 485 4.05E-154 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 13-10-2018 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Gene3D G3DSA:1.10.268.10 371 456 2.6E-177 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 3.1E-134 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_03743 b10833ea43f477897322d9b445b6bc76 758 SUPERFAMILY SSF101904 499 743 5.36E-52 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-52 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 SUPERFAMILY SSF46946 2 114 1.46E-44 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.711 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 Gene3D G3DSA:1.10.8.50 1 71 2.3E-26 T 13-10-2018 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 PIRSF PIRSF002134 1 118 1.7E-40 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02692 5fabda08eec26d9e66ad3c5eb7ed00a2 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.7E-31 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_01123 745e8a5a77464f78249a2c61b9111f72 383 Gene3D G3DSA:3.40.50.2000 187 363 3.0E-23 T 13-10-2018 VAA_01123 745e8a5a77464f78249a2c61b9111f72 383 SUPERFAMILY SSF53756 30 368 7.46E-41 T 13-10-2018 VAA_01123 745e8a5a77464f78249a2c61b9111f72 383 Pfam PF00534 Glycosyl transferases group 1 194 356 2.8E-17 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VAA_01123 745e8a5a77464f78249a2c61b9111f72 383 Gene3D G3DSA:3.40.50.2000 25 184 8.7E-13 T 13-10-2018 VAA_01123 745e8a5a77464f78249a2c61b9111f72 383 Pfam PF13439 Glycosyltransferase Family 4 61 179 5.3E-9 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VAA_03331 7d16af65f4d15f87a523c65785e5ed7b 226 Pfam PF13505 Outer membrane protein beta-barrel domain 41 193 6.8E-9 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VAA_03331 7d16af65f4d15f87a523c65785e5ed7b 226 SUPERFAMILY SSF56925 53 226 7.59E-19 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAA_03331 7d16af65f4d15f87a523c65785e5ed7b 226 Gene3D G3DSA:2.40.160.20 49 224 2.9E-12 T 13-10-2018 VAA_02490 928ab11c349c4af971b31180c6dbd5b3 437 SUPERFAMILY SSF53383 38 433 3.38E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02490 928ab11c349c4af971b31180c6dbd5b3 437 PIRSF PIRSF000390 20 437 6.8E-123 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAA_02490 928ab11c349c4af971b31180c6dbd5b3 437 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 44 429 2.3E-113 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAA_02490 928ab11c349c4af971b31180c6dbd5b3 437 Gene3D G3DSA:3.40.640.10 1 305 3.3E-100 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02490 928ab11c349c4af971b31180c6dbd5b3 437 Gene3D G3DSA:3.90.1150.10 306 437 1.8E-56 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02806 75e28899db7980d10caddff97d108aa8 308 Gene3D G3DSA:3.40.50.300 2 242 1.7E-70 T 13-10-2018 VAA_02806 75e28899db7980d10caddff97d108aa8 308 Pfam PF00005 ABC transporter 22 165 1.4E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02806 75e28899db7980d10caddff97d108aa8 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02806 75e28899db7980d10caddff97d108aa8 308 SMART SM00382 30 212 3.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02806 75e28899db7980d10caddff97d108aa8 308 SUPERFAMILY SSF52540 4 228 1.66E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 189 202 - T 13-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 Hamap MF_00124 Thymidine kinase [tdk]. 17 205 34.353 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 SUPERFAMILY SSF57716 158 206 2.71E-16 T 13-10-2018 VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 SUPERFAMILY SSF52540 18 157 1.12E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 Gene3D G3DSA:3.40.50.300 17 156 3.6E-24 T 13-10-2018 VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 Gene3D G3DSA:3.30.60.20 160 205 5.4E-8 T 13-10-2018 VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 Pfam PF00265 Thymidine kinase 18 202 4.7E-61 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAA_02154 1e6e2eacec3e20e5b01164dc08e034ab 208 PIRSF PIRSF035805 16 208 2.7E-57 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 SUPERFAMILY SSF160246 11 77 2.41E-14 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 496 1.2E-230 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 SMART SM00382 252 375 5.8E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 Pfam PF00437 Type II/IV secretion system protein 126 391 2.4E-91 T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 Gene3D G3DSA:3.30.300.160 1 89 1.4E-35 T 13-10-2018 VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 Gene3D G3DSA:3.30.450.90 90 224 2.6E-55 T 13-10-2018 VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 319 333 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 SUPERFAMILY SSF52540 106 496 2.47E-107 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00652 9c45c32814486fd9cf6d3bb7e196ab4c 499 Gene3D G3DSA:3.40.50.300 225 499 8.5E-130 T 13-10-2018 VAA_01297 975788362e89ac0d68f9ec1e07da5a4f 249 Gene3D G3DSA:3.40.50.300 4 246 1.8E-62 T 13-10-2018 VAA_01297 975788362e89ac0d68f9ec1e07da5a4f 249 SUPERFAMILY SSF52540 4 236 1.39E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01297 975788362e89ac0d68f9ec1e07da5a4f 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 8.3E-126 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VAA_01297 975788362e89ac0d68f9ec1e07da5a4f 249 Pfam PF00005 ABC transporter 19 174 3.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01297 975788362e89ac0d68f9ec1e07da5a4f 249 SMART SM00382 28 220 9.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01297 975788362e89ac0d68f9ec1e07da5a4f 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 Gene3D G3DSA:3.30.930.10 157 510 2.0E-129 T 13-10-2018 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.145 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 4.3E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 1.4E-79 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 SUPERFAMILY SSF55681 161 507 1.53E-116 T 13-10-2018 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 3.3E-201 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_00377 121121087f94eeac35f4bfa420f3923b 510 SUPERFAMILY SSF50249 16 154 1.05E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00377 121121087f94eeac35f4bfa420f3923b 510 Gene3D G3DSA:2.40.50.140 9 156 2.0E-28 T 13-10-2018 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 353 40.33 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 Gene3D G3DSA:3.40.50.2300 1 133 4.5E-29 T 13-10-2018 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 SUPERFAMILY SSF52172 1 109 6.83E-27 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01419 b2f4a97738b2c95e4273282366425b37 357 PIRSF PIRSF000876 1 356 1.6E-135 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 Pfam PF00072 Response regulator receiver domain 6 109 1.2E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 SMART SM00448 4 119 1.2E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 Pfam PF01339 CheB methylesterase 170 348 7.1E-62 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_01419 b2f4a97738b2c95e4273282366425b37 357 Gene3D G3DSA:3.40.50.180 159 356 1.0E-77 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VAA_01419 b2f4a97738b2c95e4273282366425b37 357 SUPERFAMILY SSF52738 165 354 1.31E-71 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VAA_00715 97ead39f39c4deecc3847bc362f77a10 546 Gene3D G3DSA:3.30.590.20 42 546 1.3E-194 T 13-10-2018 VAA_00715 97ead39f39c4deecc3847bc362f77a10 546 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 33 540 1.1E-215 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAA_00715 97ead39f39c4deecc3847bc362f77a10 546 Pfam PF04262 Glutamate-cysteine ligase 37 403 4.8E-169 T 13-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAA_00715 97ead39f39c4deecc3847bc362f77a10 546 SUPERFAMILY SSF55931 31 538 4.9E-204 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VAA_00715 97ead39f39c4deecc3847bc362f77a10 546 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 546 220.188 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAA_00312 795e7354c444a5ada91709406ae7da38 283 Pfam PF00665 Integrase core domain 121 234 2.5E-33 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_00312 795e7354c444a5ada91709406ae7da38 283 Gene3D G3DSA:3.30.420.10 117 273 4.1E-19 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00312 795e7354c444a5ada91709406ae7da38 283 Pfam PF13276 HTH-like domain 41 96 1.6E-9 T 13-10-2018 IPR025948 HTH-like domain VAA_00312 795e7354c444a5ada91709406ae7da38 283 SUPERFAMILY SSF53098 121 282 1.09E-42 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_03192 edcbc7e8947421d6254fe5a0ee7ace0f 644 SUPERFAMILY SSF52540 73 368 6.7E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03192 edcbc7e8947421d6254fe5a0ee7ace0f 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.6E-71 T 13-10-2018 IPR010650 PrkA C-terminal domain VAA_03192 edcbc7e8947421d6254fe5a0ee7ace0f 644 Pfam PF08298 PrkA AAA domain 20 380 7.6E-171 T 13-10-2018 IPR013153 PrkA AAA domain VAA_03192 edcbc7e8947421d6254fe5a0ee7ace0f 644 PIRSF PIRSF000549 1 644 3.3E-284 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VAA_03192 edcbc7e8947421d6254fe5a0ee7ace0f 644 SMART SM00763 19 380 2.1E-212 T 13-10-2018 IPR013153 PrkA AAA domain VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 SUPERFAMILY SSF48179 191 287 1.02E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 Gene3D G3DSA:3.40.50.720 1 193 8.2E-62 T 13-10-2018 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 SUPERFAMILY SSF52413 283 387 6.28E-28 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 PIRSF PIRSF000124 1 388 4.5E-138 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 PIRSF PIRSF500134 1 343 2.7E-123 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 PIRSF PIRSF500134 338 388 0.054 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 SMART SM00984 300 387 1.8E-13 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 Gene3D G3DSA:1.20.5.100 194 220 2.4E-20 T 13-10-2018 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 7.6E-27 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 Gene3D G3DSA:3.40.50.720 222 388 7.7E-68 T 13-10-2018 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 1.4E-33 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 SUPERFAMILY SSF51735 1 194 4.71E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 371 2.2E-7 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_02522 826e49a2ed0937a6c60d2537ac500891 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 377 1.5E-105 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 Gene3D G3DSA:1.10.287.470 94 180 6.8E-49 T 13-10-2018 VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 263 5.7E-14 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 370 3.0E-34 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 SUPERFAMILY SSF111369 53 264 6.93E-14 T 13-10-2018 VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 Gene3D G3DSA:2.40.50.100 60 220 6.8E-49 T 13-10-2018 VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 Gene3D G3DSA:2.40.420.20 44 370 6.8E-49 T 13-10-2018 VAA_01020 4fcaa8e62344f2ca7d325a0db7e87fb9 381 Gene3D G3DSA:2.40.30.170 49 310 6.8E-49 T 13-10-2018 VAA_03030 19533b0430cb3931691a928e74e5e008 384 SUPERFAMILY SSF52440 18 122 3.16E-6 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_03030 19533b0430cb3931691a928e74e5e008 384 Gene3D G3DSA:3.30.1490.20 142 217 4.0E-34 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_03030 19533b0430cb3931691a928e74e5e008 384 SUPERFAMILY SSF56059 128 351 1.32E-22 T 13-10-2018 VAA_03030 19533b0430cb3931691a928e74e5e008 384 Pfam PF07478 D-ala D-ala ligase C-terminus 136 355 8.8E-21 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_03030 19533b0430cb3931691a928e74e5e008 384 Gene3D G3DSA:3.30.470.20 120 354 4.0E-34 T 13-10-2018 VAA_01278 1c2b8d22a4400149c051d47016f6b951 254 SUPERFAMILY SSF51215 34 158 1.28E-18 T 13-10-2018 IPR037923 Transcription regulator HTH-like VAA_01278 1c2b8d22a4400149c051d47016f6b951 254 Pfam PF02311 AraC-like ligand binding domain 21 154 4.8E-26 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAA_01278 1c2b8d22a4400149c051d47016f6b951 254 Gene3D G3DSA:1.10.10.60 176 240 2.1E-13 T 13-10-2018 VAA_01278 1c2b8d22a4400149c051d47016f6b951 254 SUPERFAMILY SSF46689 179 227 1.3E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 Pfam PF00005 ABC transporter 336 466 3.5E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 Pfam PF00005 ABC transporter 18 184 8.0E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 Gene3D G3DSA:3.40.50.300 282 528 1.2E-50 T 13-10-2018 VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 Pfam PF12848 ABC transporter 224 309 1.6E-20 T 13-10-2018 IPR032781 ABC-transporter extension domain VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 Gene3D G3DSA:3.40.50.300 2 281 1.6E-56 T 13-10-2018 VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 SUPERFAMILY SSF52540 7 237 7.08E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 SUPERFAMILY SSF52540 298 520 1.75E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 SMART SM00382 26 238 6.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01828 1ebcee8a70a34a8a95a0c1fa6f6ace48 529 SMART SM00382 343 511 5.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 SUPERFAMILY SSF56425 237 356 1.79E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 Gene3D G3DSA:1.20.58.100 431 547 3.8E-40 T 13-10-2018 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 PIRSF PIRSF000171 1 581 4.0E-53 T 13-10-2018 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.1E-37 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 Gene3D G3DSA:3.90.700.10 246 350 7.7E-168 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 Pfam PF00890 FAD binding domain 9 405 3.1E-116 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 SUPERFAMILY SSF51905 5 444 3.38E-72 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 6.0E-241 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.1E-276 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 Gene3D G3DSA:3.50.50.60 9 416 7.7E-168 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 SUPERFAMILY SSF46977 452 588 1.09E-48 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03413 a69b5ba8809c5af6235e0e347ea92496 588 Gene3D G3DSA:4.10.80.40 548 588 2.9E-23 T 13-10-2018 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 SUPERFAMILY SSF54534 80 156 1.44E-19 T 13-10-2018 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 Gene3D G3DSA:3.10.50.30 77 159 4.0E-32 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.418 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.9E-71 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 PIRSF PIRSF006092 2 158 5.0E-42 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 Gene3D G3DSA:1.10.287.180 1 76 1.2E-27 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.4E-23 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 SUPERFAMILY SSF46557 3 78 1.44E-25 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.0E-22 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAA_00634 fc50dfd0ec13d73c1e81274bf87eb51f 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.963 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VAA_00570 eb7cad39193108a434af3ff5690f8295 260 SUPERFAMILY SSF53335 28 258 1.21E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00570 eb7cad39193108a434af3ff5690f8295 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VAA_00570 eb7cad39193108a434af3ff5690f8295 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VAA_00570 eb7cad39193108a434af3ff5690f8295 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 1.3E-101 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VAA_00570 eb7cad39193108a434af3ff5690f8295 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 37.84 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VAA_00570 eb7cad39193108a434af3ff5690f8295 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 4.4E-83 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VAA_00570 eb7cad39193108a434af3ff5690f8295 260 Gene3D G3DSA:3.40.50.150 40 260 2.6E-74 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 668 771 1.1E-9 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 SUPERFAMILY SSF52540 50 557 7.19E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01350 4a1d150b0c769b42245982b8791f5212 805 Gene3D G3DSA:3.30.230.10 560 788 8.7E-92 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_01350 4a1d150b0c769b42245982b8791f5212 805 Gene3D G3DSA:1.10.8.60 469 555 3.4E-13 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 695 714 5.4E-7 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 665 684 5.4E-7 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 5.4E-7 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 Pfam PF13654 AAA domain 44 558 2.1E-186 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 SUPERFAMILY SSF54211 584 775 2.62E-35 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_01350 4a1d150b0c769b42245982b8791f5212 805 Gene3D G3DSA:3.40.50.300 24 205 6.4E-28 T 13-10-2018 VAA_01350 4a1d150b0c769b42245982b8791f5212 805 Gene3D G3DSA:3.40.50.300 251 468 1.0E-55 T 13-10-2018 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 SMART SM01230 102 379 7.8E-152 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 4.2E-211 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 Gene3D G3DSA:3.30.590.10 105 457 1.8E-148 T 13-10-2018 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.8E-138 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.2E-30 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 SUPERFAMILY SSF54368 3 100 6.8E-36 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 SUPERFAMILY SSF55931 102 468 1.86E-137 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VAA_00663 56710f7cd621261bd36978a0a51a63db 469 Gene3D G3DSA:3.10.20.70 2 104 1.6E-40 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VAA_03323 2e2279c315214e259f13744dc1a8bc55 197 Gene3D G3DSA:1.20.1540.10 10 196 1.8E-19 T 13-10-2018 IPR035952 Rhomboid-like superfamily VAA_03323 2e2279c315214e259f13744dc1a8bc55 197 SUPERFAMILY SSF144091 19 193 5.1E-30 T 13-10-2018 VAA_03323 2e2279c315214e259f13744dc1a8bc55 197 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 39 185 3.6E-51 T 13-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VAA_03323 2e2279c315214e259f13744dc1a8bc55 197 Pfam PF01694 Rhomboid family 48 186 1.2E-14 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 SUPERFAMILY SSF56059 116 327 1.96E-43 T 13-10-2018 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 Gene3D G3DSA:3.40.50.20 19 325 6.8E-83 T 13-10-2018 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 PIRSF PIRSF039102 1 334 2.6E-78 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 SUPERFAMILY SSF52440 4 115 6.04E-28 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 Gene3D G3DSA:3.30.1490.20 132 199 6.8E-83 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 329 5.5E-103 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 33.03 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 Pfam PF07478 D-ala D-ala ligase C-terminus 126 325 1.6E-54 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 Gene3D G3DSA:3.30.470.20 105 320 6.8E-83 T 13-10-2018 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 Pfam PF01820 D-ala D-ala ligase N-terminus 6 106 1.8E-21 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00329 e6c4d43e121b429b92acbb86661c82a4 334 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 SUPERFAMILY SSF46785 23 72 1.97E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 Pfam PF00717 Peptidase S24-like 122 188 8.4E-16 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 Hamap MF_00015 LexA repressor [lexA]. 8 207 28.943 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 Gene3D G3DSA:1.10.10.10 13 72 1.3E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 TIGRFAM TIGR00498 lexA: repressor LexA 23 207 2.2E-71 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 130 141 5.0E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 119 129 5.0E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 158 170 5.0E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 Pfam PF01726 LexA DNA binding domain 24 68 1.5E-17 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 Gene3D G3DSA:2.10.109.10 88 210 1.7E-45 T 13-10-2018 VAA_00459 e1c4c19aed015525ead91e2043b1550d 210 SUPERFAMILY SSF51306 84 206 1.52E-37 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VAA_01475 c5bfd2e112a9d8d74784c667cac56651 288 Pfam PF01418 Helix-turn-helix domain, rpiR family 20 85 2.7E-12 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VAA_01475 c5bfd2e112a9d8d74784c667cac56651 288 SUPERFAMILY SSF53697 118 282 5.56E-22 T 13-10-2018 VAA_01475 c5bfd2e112a9d8d74784c667cac56651 288 SUPERFAMILY SSF46689 19 95 6.0E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01475 c5bfd2e112a9d8d74784c667cac56651 288 Pfam PF01380 SIS domain 151 281 1.5E-20 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_01475 c5bfd2e112a9d8d74784c667cac56651 288 Gene3D G3DSA:1.10.10.10 15 92 1.7E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01475 c5bfd2e112a9d8d74784c667cac56651 288 Gene3D G3DSA:3.40.50.10490 119 288 2.9E-28 T 13-10-2018 VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.23 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 Pfam PF00297 Ribosomal protein L3 64 182 7.4E-16 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 SUPERFAMILY SSF50447 1 208 8.12E-84 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.5E-94 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 Gene3D G3DSA:2.40.50.620 33 96 1.6E-15 T 13-10-2018 VAA_02670 95fd38a5f30045ecfecc026b9f7855cc 209 Gene3D G3DSA:2.40.30.10 129 209 6.9E-20 T 13-10-2018 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 SUPERFAMILY SSF53822 60 331 1.28E-93 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 Gene3D G3DSA:1.10.260.40 3 59 5.6E-24 T 13-10-2018 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 Gene3D G3DSA:3.40.50.2300 69 322 2.3E-88 T 13-10-2018 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 Gene3D G3DSA:3.40.50.2300 161 290 2.3E-88 T 13-10-2018 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 Pfam PF13377 Periplasmic binding protein-like domain 170 329 4.5E-41 T 13-10-2018 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 SUPERFAMILY SSF47413 1 59 5.04E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_04312 f6d2dee034304fb405ecf7d7c04c93a2 335 SMART SM00354 1 71 3.0E-36 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01873 0da535570fe21247cf4160d58e64baf5 157 Pfam PF13185 GAF domain 44 137 2.0E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_01873 0da535570fe21247cf4160d58e64baf5 157 Gene3D G3DSA:3.30.450.40 2 157 5.6E-62 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_01873 0da535570fe21247cf4160d58e64baf5 157 SUPERFAMILY SSF55781 5 144 6.38E-39 T 13-10-2018 VAA_01873 0da535570fe21247cf4160d58e64baf5 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 13-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Pfam PF00271 Helicase conserved C-terminal domain 238 341 5.6E-20 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Gene3D G3DSA:3.40.50.300 14 219 1.9E-80 T 13-10-2018 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SUPERFAMILY SSF52540 20 209 3.55E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SUPERFAMILY SSF52540 219 467 5.31E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SMART SM00490 261 342 1.6E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Pfam PF09382 RQC domain 417 525 8.8E-38 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 26 614 1.5E-250 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SUPERFAMILY SSF47819 542 617 1.07E-25 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Gene3D G3DSA:1.10.10.10 352 534 8.7E-54 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SMART SM00487 33 229 1.4E-25 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Gene3D G3DSA:3.40.50.300 220 351 6.6E-43 T 13-10-2018 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SMART SM00341 541 619 7.5E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Pfam PF16124 RecQ zinc-binding 354 415 1.6E-17 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Gene3D G3DSA:1.10.150.80 535 618 1.3E-27 T 13-10-2018 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Pfam PF00570 HRDC domain 546 611 3.5E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 Pfam PF00270 DEAD/DEAH box helicase 41 196 2.6E-18 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 26 474 4.6E-189 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VAA_02416 bd82e27e5e584598bceb6d80e84235e4 619 SMART SM00956 422 525 1.0E-50 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VAA_01872 8004815c2024ce461105abac029c9916 209 Pfam PF04352 ProQ/FINO family 8 115 2.6E-43 T 13-10-2018 IPR016103 ProQ/FinO domain VAA_01872 8004815c2024ce461105abac029c9916 209 Gene3D G3DSA:1.10.1710.10 1 118 6.8E-26 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily VAA_01872 8004815c2024ce461105abac029c9916 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 209 30.175 T 13-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VAA_01872 8004815c2024ce461105abac029c9916 209 SMART SM00945 5 119 9.1E-62 T 13-10-2018 IPR016103 ProQ/FinO domain VAA_01872 8004815c2024ce461105abac029c9916 209 Pfam PF17516 ProQ C-terminal domain 160 208 4.1E-20 T 13-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VAA_01872 8004815c2024ce461105abac029c9916 209 SUPERFAMILY SSF48657 5 117 3.53E-39 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 SUPERFAMILY SSF52210 123 286 2.09E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 Pfam PF00549 CoA-ligase 151 271 1.2E-21 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.263 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 SUPERFAMILY SSF51735 1 122 1.04E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 Gene3D G3DSA:3.40.50.720 2 123 3.1E-51 T 13-10-2018 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 8.1E-146 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 SMART SM00881 4 100 1.6E-35 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 Pfam PF02629 CoA binding domain 6 99 6.5E-31 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 Gene3D G3DSA:3.40.50.261 124 288 2.8E-76 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 PIRSF PIRSF001553 1 289 3.6E-134 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 13-10-2018 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 13-10-2018 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 13-10-2018 VAA_03407 563fdbf6d05ac3e7990288c874be5901 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 13-10-2018 VAA_02347 b673c22413959defaa0738f3972eb2f0 311 Gene3D G3DSA:3.40.50.11550 38 264 4.7E-29 T 13-10-2018 VAA_02347 b673c22413959defaa0738f3972eb2f0 311 Gene3D G3DSA:1.10.8.760 151 215 4.7E-29 T 13-10-2018 VAA_02347 b673c22413959defaa0738f3972eb2f0 311 PIRSF PIRSF020419 1 295 1.7E-74 T 13-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VAA_02347 b673c22413959defaa0738f3972eb2f0 311 SUPERFAMILY SSF159501 29 272 9.59E-73 T 13-10-2018 VAA_02347 b673c22413959defaa0738f3972eb2f0 311 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 51 251 9.8E-59 T 13-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VAA_02113 97568dee2194e2c906d2e21194fecafd 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.0E-24 T 13-10-2018 IPR011893 Selenoprotein, Rdx-type VAA_02113 97568dee2194e2c906d2e21194fecafd 92 SUPERFAMILY SSF52833 5 87 1.57E-29 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_02113 97568dee2194e2c906d2e21194fecafd 92 Pfam PF10262 Rdx family 5 78 1.0E-31 T 13-10-2018 IPR011893 Selenoprotein, Rdx-type VAA_02113 97568dee2194e2c906d2e21194fecafd 92 Gene3D G3DSA:3.40.30.10 1 92 6.2E-40 T 13-10-2018 VAA_03716 d0d849adffb9384052074035fe2f874c 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.864 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03716 d0d849adffb9384052074035fe2f874c 353 Gene3D G3DSA:3.40.50.2000 161 318 3.4E-123 T 13-10-2018 VAA_03716 d0d849adffb9384052074035fe2f874c 353 Gene3D G3DSA:3.40.50.2000 8 160 3.4E-123 T 13-10-2018 VAA_03716 d0d849adffb9384052074035fe2f874c 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 3.0E-48 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03716 d0d849adffb9384052074035fe2f874c 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 336 1.3E-34 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VAA_03716 d0d849adffb9384052074035fe2f874c 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 348 3.2E-122 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03716 d0d849adffb9384052074035fe2f874c 353 SUPERFAMILY SSF53756 5 351 3.33E-126 T 13-10-2018 VAA_03618 688e4644f22ad6242216f392555af59d 376 Gene3D G3DSA:3.40.50.150 187 376 1.5E-45 T 13-10-2018 VAA_03618 688e4644f22ad6242216f392555af59d 376 SUPERFAMILY SSF53335 189 357 2.54E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03618 688e4644f22ad6242216f392555af59d 376 PIRSF PIRSF037565 1 376 2.0E-169 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VAA_03618 688e4644f22ad6242216f392555af59d 376 Pfam PF05175 Methyltransferase small domain 200 373 1.5E-52 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAA_03618 688e4644f22ad6242216f392555af59d 376 Gene3D G3DSA:3.40.50.150 8 180 3.3E-50 T 13-10-2018 VAA_03618 688e4644f22ad6242216f392555af59d 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_03618 688e4644f22ad6242216f392555af59d 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.896 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 SUPERFAMILY SSF56059 1 238 1.04E-79 T 13-10-2018 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 SUPERFAMILY SSF52210 239 385 4.71E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 Gene3D G3DSA:3.40.50.261 240 388 1.2E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 Pfam PF08442 ATP-grasp domain 2 203 1.7E-78 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 Gene3D G3DSA:3.30.470.20 1 234 4.9E-92 T 13-10-2018 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 Pfam PF00549 CoA-ligase 262 382 9.2E-25 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.138 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.4E-172 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 PIRSF PIRSF001554 1 388 1.1E-153 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VAA_03408 b69770253b24eed01a3e6e8556403adf 388 Gene3D G3DSA:3.30.1490.20 21 104 4.9E-92 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_01376 1bc5ec33bfe2bf2dc1acff242e4c6b63 197 SUPERFAMILY SSF53613 8 194 2.81E-45 T 13-10-2018 IPR029056 Ribokinase-like VAA_01376 1bc5ec33bfe2bf2dc1acff242e4c6b63 197 Pfam PF00294 pfkB family carbohydrate kinase 9 188 1.9E-34 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_01376 1bc5ec33bfe2bf2dc1acff242e4c6b63 197 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 134 147 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAA_01376 1bc5ec33bfe2bf2dc1acff242e4c6b63 197 Gene3D G3DSA:3.40.1190.20 2 196 6.6E-51 T 13-10-2018 IPR029056 Ribokinase-like VAA_02535 1c4e6916ae7ef065beab677318704125 275 SUPERFAMILY SSF52335 7 197 7.46E-72 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAA_02535 1c4e6916ae7ef065beab677318704125 275 SMART SM00851 19 132 8.8E-61 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VAA_02535 1c4e6916ae7ef065beab677318704125 275 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 220 1.9E-18 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAA_02535 1c4e6916ae7ef065beab677318704125 275 Pfam PF02142 MGS-like domain 19 132 5.2E-31 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VAA_02535 1c4e6916ae7ef065beab677318704125 275 Gene3D G3DSA:3.40.50.1380 1 200 8.2E-88 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAA_02535 1c4e6916ae7ef065beab677318704125 275 SMART SM00798 137 258 2.4E-6 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.79 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 Pfam PF00203 Ribosomal protein S19 3 83 1.5E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.6E-25 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.6E-25 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.6E-25 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 Gene3D G3DSA:3.30.860.10 1 92 4.7E-44 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 PIRSF PIRSF002144 1 92 7.1E-32 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.2E-46 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAA_02674 0942fb583d166800d58f8d5a44dfc979 92 SUPERFAMILY SSF54570 3 84 9.55E-36 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_03672 73ee300a4a45dda781a3fbf55cb48d5d 419 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 416 5.8E-150 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VAA_03672 73ee300a4a45dda781a3fbf55cb48d5d 419 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 416 5.9E-72 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VAA_03672 73ee300a4a45dda781a3fbf55cb48d5d 419 Pfam PF07670 Nucleoside recognition 95 191 3.1E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAA_03672 73ee300a4a45dda781a3fbf55cb48d5d 419 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.9E-25 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VAA_01655 eba9b5ac267f36776503c214e3db1fd1 343 Gene3D G3DSA:3.40.50.300 74 330 4.7E-86 T 13-10-2018 VAA_01655 eba9b5ac267f36776503c214e3db1fd1 343 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 317 2.7E-120 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VAA_01655 eba9b5ac267f36776503c214e3db1fd1 343 SUPERFAMILY SSF52540 1 309 1.45E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01655 eba9b5ac267f36776503c214e3db1fd1 343 Gene3D G3DSA:3.30.450.90 1 72 5.9E-13 T 13-10-2018 VAA_01655 eba9b5ac267f36776503c214e3db1fd1 343 Pfam PF00437 Type II/IV secretion system protein 3 243 1.9E-36 T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_02919 a89aeaed04d91199be0983edb408857a 466 SMART SM00487 42 245 1.1E-52 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02919 a89aeaed04d91199be0983edb408857a 466 SMART SM00490 282 363 9.2E-31 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02919 a89aeaed04d91199be0983edb408857a 466 Pfam PF00270 DEAD/DEAH box helicase 47 217 4.7E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02919 a89aeaed04d91199be0983edb408857a 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 174 182 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_02919 a89aeaed04d91199be0983edb408857a 466 SUPERFAMILY SSF52540 95 381 3.27E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02919 a89aeaed04d91199be0983edb408857a 466 Pfam PF00271 Helicase conserved C-terminal domain 258 363 3.9E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02919 a89aeaed04d91199be0983edb408857a 466 Gene3D G3DSA:3.40.50.300 236 449 3.1E-51 T 13-10-2018 VAA_02919 a89aeaed04d91199be0983edb408857a 466 Gene3D G3DSA:3.40.50.300 16 234 9.9E-72 T 13-10-2018 VAA_02684 b0f41beed04e1068af4875f08c0ff325 130 Gene3D G3DSA:3.30.1370.30 2 72 1.0E-26 T 13-10-2018 VAA_02684 b0f41beed04e1068af4875f08c0ff325 130 SUPERFAMILY SSF56047 2 129 5.1E-44 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02684 b0f41beed04e1068af4875f08c0ff325 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02684 b0f41beed04e1068af4875f08c0ff325 130 Pfam PF00410 Ribosomal protein S8 5 129 1.4E-46 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02684 b0f41beed04e1068af4875f08c0ff325 130 Gene3D G3DSA:3.30.1490.10 73 130 1.6E-23 T 13-10-2018 VAA_02684 b0f41beed04e1068af4875f08c0ff325 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.91 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_01096 0eb7a1f16dcdaaeddda01f1e6d18e770 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.9E-26 T 13-10-2018 VAA_01096 0eb7a1f16dcdaaeddda01f1e6d18e770 105 SUPERFAMILY SSF81301 2 105 1.8E-36 T 13-10-2018 VAA_01096 0eb7a1f16dcdaaeddda01f1e6d18e770 105 Gene3D G3DSA:3.30.460.10 1 105 6.8E-35 T 13-10-2018 VAA_01096 0eb7a1f16dcdaaeddda01f1e6d18e770 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 9.2E-37 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VAA_01096 0eb7a1f16dcdaaeddda01f1e6d18e770 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.95 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VAA_02652 58c37619f3284094e662c732e6ce03fc 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 7.7E-70 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VAA_02652 58c37619f3284094e662c732e6ce03fc 289 Gene3D G3DSA:3.40.50.300 1 289 3.3E-112 T 13-10-2018 VAA_02652 58c37619f3284094e662c732e6ce03fc 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.1E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAA_02652 58c37619f3284094e662c732e6ce03fc 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.1E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAA_02652 58c37619f3284094e662c732e6ce03fc 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.1E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAA_02652 58c37619f3284094e662c732e6ce03fc 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.1E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VAA_02652 58c37619f3284094e662c732e6ce03fc 289 SUPERFAMILY SSF52540 4 286 1.7E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 SUPERFAMILY SSF89260 394 498 2.62E-11 T 13-10-2018 VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 422 485 2.6E-13 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 Gene3D G3DSA:2.60.120.380 402 501 4.4E-31 T 13-10-2018 VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 Gene3D G3DSA:3.40.630.10 107 401 1.3E-92 T 13-10-2018 VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 PIRSF PIRSF036685 4 503 3.3E-246 T 13-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 SUPERFAMILY SSF53187 110 395 1.37E-68 T 13-10-2018 VAA_01795 80ecd40001a5125a79f402d793ff81f9 503 Pfam PF04389 Peptidase family M28 184 381 7.3E-38 T 13-10-2018 IPR007484 Peptidase M28 VAA_02363 23c90458f14c772bc805da7b855678c4 187 Gene3D G3DSA:1.10.1740.10 10 91 5.7E-17 T 13-10-2018 VAA_02363 23c90458f14c772bc805da7b855678c4 187 Pfam PF08281 Sigma-70, region 4 119 171 5.0E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_02363 23c90458f14c772bc805da7b855678c4 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_02363 23c90458f14c772bc805da7b855678c4 187 Pfam PF04542 Sigma-70 region 2 29 95 2.0E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_02363 23c90458f14c772bc805da7b855678c4 187 SUPERFAMILY SSF88946 23 104 9.02E-20 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_02363 23c90458f14c772bc805da7b855678c4 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 2.7E-21 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_02363 23c90458f14c772bc805da7b855678c4 187 Gene3D G3DSA:1.10.10.10 114 177 6.8E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02363 23c90458f14c772bc805da7b855678c4 187 SUPERFAMILY SSF88659 116 176 1.79E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 SUPERFAMILY SSF46785 14 134 1.11E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 SUPERFAMILY SSF53850 113 312 5.27E-39 T 13-10-2018 VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 Pfam PF03466 LysR substrate binding domain 112 311 3.2E-44 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 86 5.9E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 Gene3D G3DSA:1.10.10.10 25 115 2.0E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03074 5649b05be63cf8346b79564ea2beaaab 313 Gene3D G3DSA:3.40.190.290 116 313 1.7E-48 T 13-10-2018 VAA_00961 7112bcbdc6a4e1ddfa9751572d9951e9 334 SMART SM00448 3 115 1.1E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00961 7112bcbdc6a4e1ddfa9751572d9951e9 334 Gene3D G3DSA:3.40.1550.10 139 328 1.2E-30 T 13-10-2018 IPR028976 CheC-like superfamily VAA_00961 7112bcbdc6a4e1ddfa9751572d9951e9 334 Gene3D G3DSA:3.40.50.2300 3 125 1.3E-25 T 13-10-2018 VAA_00961 7112bcbdc6a4e1ddfa9751572d9951e9 334 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00961 7112bcbdc6a4e1ddfa9751572d9951e9 334 SUPERFAMILY SSF103039 141 329 1.16E-37 T 13-10-2018 IPR028976 CheC-like superfamily VAA_00961 7112bcbdc6a4e1ddfa9751572d9951e9 334 SUPERFAMILY SSF52172 4 122 2.13E-26 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00420 30ed6ea232115b0d6902d2fc58b3c8f2 386 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 22 384 2.1E-164 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VAA_00420 30ed6ea232115b0d6902d2fc58b3c8f2 386 Gene3D G3DSA:3.30.420.40 162 345 6.2E-134 T 13-10-2018 VAA_00420 30ed6ea232115b0d6902d2fc58b3c8f2 386 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 21 385 41.91 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VAA_00420 30ed6ea232115b0d6902d2fc58b3c8f2 386 SUPERFAMILY SSF53067 23 360 3.48E-27 T 13-10-2018 VAA_00420 30ed6ea232115b0d6902d2fc58b3c8f2 386 Gene3D G3DSA:3.30.420.40 28 380 6.2E-134 T 13-10-2018 VAA_01141 c446978083b904592b3154ba218b6d78 261 SUPERFAMILY SSF51445 9 254 2.89E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01141 c446978083b904592b3154ba218b6d78 261 Pfam PF00128 Alpha amylase, catalytic domain 33 255 1.1E-88 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_01141 c446978083b904592b3154ba218b6d78 261 SMART SM00642 18 259 6.4E-74 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_01141 c446978083b904592b3154ba218b6d78 261 Gene3D G3DSA:3.20.20.80 10 255 4.9E-124 T 13-10-2018 VAA_01141 c446978083b904592b3154ba218b6d78 261 Gene3D G3DSA:3.90.400.10 110 179 4.9E-124 T 13-10-2018 VAA_03919 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_03919 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_03919 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_03919 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_03891 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_03891 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_03891 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_03891 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_03011 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_03011 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_03011 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_03011 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_04051 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_04051 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_04051 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04051 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_03949 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_03949 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_03949 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_03949 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_04320 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_04320 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_04320 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04320 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_04071 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_04071 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_04071 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04071 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_04060 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_04060 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_04060 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04060 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_03967 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_03967 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_03967 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_03967 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_04257 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_04257 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_04257 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04257 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_04065 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_04065 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_04065 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04065 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_03946 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13817 IS66 C-terminal element 473 509 3.3E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_03946 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF03050 Transposase IS66 family 183 466 1.5E-101 T 13-10-2018 IPR004291 Transposase, IS66 VAA_03946 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 1.7E-16 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_03946 c724bd8a8dd9ccdd57a174973f1be31e 513 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 2.7E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 2.6E-48 T 13-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 SUPERFAMILY SSF55620 184 267 2.22E-9 T 13-10-2018 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 PIRSF PIRSF004750 6 281 8.4E-130 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 Pfam PF14489 QueF-like protein 194 270 3.5E-28 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 161.749 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 Gene3D G3DSA:3.30.1130.10 21 138 6.2E-46 T 13-10-2018 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 Gene3D G3DSA:3.30.1130.10 143 281 2.5E-64 T 13-10-2018 VAA_01152 7f6488c60de0132eaaf5568466c23f63 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 7.4E-130 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 469 579 5.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Gene3D G3DSA:1.10.287.130 322 419 5.0E-26 T 13-10-2018 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 2.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 2.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 536 2.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 2.7E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 SMART SM00448 602 716 7.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Pfam PF00512 His Kinase A (phospho-acceptor) domain 356 421 5.3E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Gene3D G3DSA:3.30.565.10 420 585 2.2E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 SUPERFAMILY SSF52172 600 732 4.98E-29 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Pfam PF02743 Cache domain 44 232 1.4E-12 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 SUPERFAMILY SSF47384 343 422 5.1E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 SMART SM00388 356 421 2.3E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 SMART SM00387 468 583 1.9E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Gene3D G3DSA:3.40.50.2300 589 723 5.9E-31 T 13-10-2018 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Gene3D G3DSA:3.30.450.20 34 209 5.4E-23 T 13-10-2018 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 Pfam PF00072 Response regulator receiver domain 605 716 1.1E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00082 d6b7d1f906c235dcd1c05c60e922e0a2 811 SUPERFAMILY SSF55874 410 580 3.27E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02184 7606631ce977ae917b04eca7e6cf1706 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 225 1.4E-31 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VAA_02184 7606631ce977ae917b04eca7e6cf1706 232 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 231 35.066 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VAA_02184 7606631ce977ae917b04eca7e6cf1706 232 SUPERFAMILY SSF55729 80 231 1.7E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02184 7606631ce977ae917b04eca7e6cf1706 232 PIRSF PIRSF037208 1 232 2.6E-80 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VAA_02184 7606631ce977ae917b04eca7e6cf1706 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 2.7E-17 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 Gene3D G3DSA:1.10.10.10 13 110 5.3E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 Pfam PF00891 O-methyltransferase 191 350 2.0E-11 T 13-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 SUPERFAMILY SSF46785 31 111 2.54E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 Gene3D G3DSA:3.40.50.150 178 362 3.3E-112 T 13-10-2018 VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 SUPERFAMILY SSF53335 111 353 2.36E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 Gene3D G3DSA:1.20.58.1390 113 327 3.3E-112 T 13-10-2018 VAA_03256 41311a2ec718dcc5f21cbcc22f437c1b 368 PIRSF PIRSF005739 12 364 2.0E-7 T 13-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 SMART SM00862 152 228 7.6E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 Gene3D G3DSA:1.10.10.10 122 233 4.2E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 Gene3D G3DSA:3.40.50.2300 2 121 2.6E-31 T 13-10-2018 VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 Pfam PF00072 Response regulator receiver domain 8 115 9.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 SUPERFAMILY SSF52172 3 123 1.57E-34 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 SUPERFAMILY SSF46894 128 230 6.52E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 SMART SM00448 5 115 2.5E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02049 d16d376eaba7d1956b3c1bbfc0e7e355 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 7.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02717 c826b93d749f1dcefe04df64a0d87d6d 238 Gene3D G3DSA:3.40.50.300 9 235 7.8E-59 T 13-10-2018 VAA_02717 c826b93d749f1dcefe04df64a0d87d6d 238 Pfam PF00005 ABC transporter 34 184 2.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02717 c826b93d749f1dcefe04df64a0d87d6d 238 SMART SM00382 39 232 8.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02717 c826b93d749f1dcefe04df64a0d87d6d 238 SUPERFAMILY SSF52540 9 228 2.57E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 Pfam PF01047 MarR family 49 107 2.5E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 SUPERFAMILY SSF46785 17 157 2.66E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 Gene3D G3DSA:1.10.10.10 17 154 3.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 4.4E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 4.4E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 4.4E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00898 6a25bdaa17afb9bc020d557f7123bfd2 176 SMART SM00347 42 142 4.2E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 SUPERFAMILY SSF55031 181 290 1.02E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.1E-45 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.576 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.2E-185 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 SUPERFAMILY SSF53187 6 375 3.14E-65 T 13-10-2018 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 Gene3D G3DSA:3.30.70.360 181 294 1.3E-128 T 13-10-2018 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 Gene3D G3DSA:3.40.630.10 9 364 1.3E-128 T 13-10-2018 VAA_03478 0640a731f45d92e4591687bc1641e0a3 377 Pfam PF07687 Peptidase dimerisation domain 177 284 6.0E-23 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VAA_00550 b28516a6e01191f67e2961b56928b9fd 275 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 19 272 38.836 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VAA_00550 b28516a6e01191f67e2961b56928b9fd 275 Gene3D G3DSA:3.40.50.150 73 274 6.6E-74 T 13-10-2018 VAA_00550 b28516a6e01191f67e2961b56928b9fd 275 SUPERFAMILY SSF53335 24 271 5.16E-72 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00550 b28516a6e01191f67e2961b56928b9fd 275 Pfam PF04445 Putative SAM-dependent methyltransferase 35 271 3.2E-105 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VAA_00550 b28516a6e01191f67e2961b56928b9fd 275 Gene3D G3DSA:3.40.1630.10 17 72 7.2E-19 T 13-10-2018 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 Gene3D G3DSA:1.10.10.60 302 357 3.6E-7 T 13-10-2018 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 337 357 1.0E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 320 337 1.0E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 Pfam PF02954 Bacterial regulatory protein, Fis family 315 348 1.8E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 Gene3D G3DSA:3.40.50.300 22 203 1.8E-58 T 13-10-2018 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 Gene3D G3DSA:1.10.8.60 204 287 6.2E-26 T 13-10-2018 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 SMART SM00382 52 204 4.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 Pfam PF00158 Sigma-54 interaction domain 33 195 6.7E-57 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 118 133 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 SUPERFAMILY SSF52540 33 266 1.05E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 246 255 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 32 354 1.3E-158 T 13-10-2018 IPR014317 Transcription activator PspF VAA_02133 8cb6deec2fdaf01c4e98d186703f6a6e 362 SUPERFAMILY SSF46689 246 355 1.61E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Gene3D G3DSA:1.20.1270.10 520 616 1.4E-26 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 SUPERFAMILY SSF53067 19 196 1.75E-50 T 13-10-2018 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Gene3D G3DSA:3.30.420.40 194 361 7.1E-114 T 13-10-2018 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 9.1E-55 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.982 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Pfam PF00012 Hsp70 protein 22 601 7.0E-195 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Gene3D G3DSA:2.60.34.10 379 518 1.9E-49 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Gene3D G3DSA:3.90.640.10 238 311 7.1E-114 T 13-10-2018 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 Gene3D G3DSA:3.30.420.40 23 374 7.1E-114 T 13-10-2018 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 3.7E-266 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 SUPERFAMILY SSF53067 200 377 4.18E-51 T 13-10-2018 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 SUPERFAMILY SSF100934 504 616 2.75E-34 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAA_00515 7553aa1ab2d553a7e565d8a3bffb10fa 617 SUPERFAMILY SSF100920 384 537 1.24E-50 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 66.464 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 6.4E-267 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 SUPERFAMILY SSF53901 296 434 2.2E-31 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 3.3E-61 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 PIRSF PIRSF000429 8 435 4.8E-120 T 13-10-2018 IPR002155 Thiolase GO:0016747 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 4.8E-35 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 SUPERFAMILY SSF53901 14 294 2.99E-59 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.3E-127 T 13-10-2018 IPR002155 Thiolase GO:0016747 VAA_02362 3907a031bc476a1c4f0cc074e9c83309 435 Gene3D G3DSA:3.40.47.10 4 434 4.6E-110 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_00690 b7d19435da99a9c4a1839f6c9f1c2d6f 243 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAA_00690 b7d19435da99a9c4a1839f6c9f1c2d6f 243 SUPERFAMILY SSF53448 8 230 3.47E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_00690 b7d19435da99a9c4a1839f6c9f1c2d6f 243 Gene3D G3DSA:3.90.550.10 3 234 2.5E-75 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_00690 b7d19435da99a9c4a1839f6c9f1c2d6f 243 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 9.5E-78 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAA_00690 b7d19435da99a9c4a1839f6c9f1c2d6f 243 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 3.2E-76 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAA_00690 b7d19435da99a9c4a1839f6c9f1c2d6f 243 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 44.032 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VAA_02367 436f858a9dcdea8419a0476d229279cc 203 Gene3D G3DSA:3.40.50.300 13 203 2.9E-71 T 13-10-2018 VAA_02367 436f858a9dcdea8419a0476d229279cc 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 31 203 2.2E-69 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VAA_02367 436f858a9dcdea8419a0476d229279cc 203 PIRSF PIRSF015617 8 203 1.9E-66 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VAA_02367 436f858a9dcdea8419a0476d229279cc 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 34 203 2.5E-59 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VAA_02367 436f858a9dcdea8419a0476d229279cc 203 SUPERFAMILY SSF52540 14 203 2.83E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02367 436f858a9dcdea8419a0476d229279cc 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 28 5.5E-8 T 13-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 PRINTS PR00095 Anthranilate synthase component I signature 368 381 9.6E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 PRINTS PR00095 Anthranilate synthase component I signature 462 476 9.6E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 PRINTS PR00095 Anthranilate synthase component I signature 477 491 9.6E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 PRINTS PR00095 Anthranilate synthase component I signature 382 395 9.6E-23 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 PIRSF PIRSF001373 15 536 1.3E-260 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 Pfam PF00425 chorismate binding enzyme 260 520 1.1E-84 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 35 532 5.6E-231 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 Gene3D G3DSA:3.60.120.10 21 536 6.8E-186 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 SUPERFAMILY SSF56322 27 532 9.68E-160 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_02247 87ba407a3f3bc27bb3c76aa579ecdf43 536 Pfam PF04715 Anthranilate synthase component I, N terminal region 37 211 5.5E-14 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_01551 b62f6d7878818d28be55f963acb657bb 244 Gene3D G3DSA:3.30.9.10 1 63 2.3E-33 T 13-10-2018 VAA_01551 b62f6d7878818d28be55f963acb657bb 244 Gene3D G3DSA:1.10.8.870 137 203 4.4E-19 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01551 b62f6d7878818d28be55f963acb657bb 244 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 123 218 5.2E-14 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VAA_01551 b62f6d7878818d28be55f963acb657bb 244 Gene3D G3DSA:3.50.50.60 64 133 2.3E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_04193 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04209 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04232 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04231 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04230 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04283 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04259 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04319 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04210 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04177 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_04256 520b6246c2ae7ba52a90371fbc5adc16 117 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_00617 2a7325bd7b56b5ffadbe5888284b8e6f 251 Hamap MF_02088 Probable queuosine precursor transporter. 34 241 15.516 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VAA_00617 2a7325bd7b56b5ffadbe5888284b8e6f 251 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 40 231 2.4E-61 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VAA_00617 2a7325bd7b56b5ffadbe5888284b8e6f 251 Pfam PF02592 Putative vitamin uptake transporter 70 226 1.1E-37 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VAA_00693 c2d5294b42ce1c0d1c0f3345928c258c 248 Gene3D G3DSA:3.40.1210.10 1 248 1.5E-93 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAA_00693 c2d5294b42ce1c0d1c0f3345928c258c 248 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 41.073 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAA_00693 c2d5294b42ce1c0d1c0f3345928c258c 248 Pfam PF01975 Survival protein SurE 3 181 1.1E-59 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAA_00693 c2d5294b42ce1c0d1c0f3345928c258c 248 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 6.6E-70 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VAA_00693 c2d5294b42ce1c0d1c0f3345928c258c 248 SUPERFAMILY SSF64167 1 246 1.28E-84 T 13-10-2018 VAA_00415 e9dfeb8932f6a37e6119d9e00acf7842 320 Pfam PF02401 LytB protein 7 288 9.4E-92 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VAA_00415 e9dfeb8932f6a37e6119d9e00acf7842 320 Gene3D G3DSA:3.40.50.11270 16 100 3.9E-108 T 13-10-2018 VAA_00415 e9dfeb8932f6a37e6119d9e00acf7842 320 Gene3D G3DSA:3.40.1010.20 101 202 3.9E-108 T 13-10-2018 VAA_00415 e9dfeb8932f6a37e6119d9e00acf7842 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 38.069 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VAA_00415 e9dfeb8932f6a37e6119d9e00acf7842 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 6.0E-97 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VAA_00415 e9dfeb8932f6a37e6119d9e00acf7842 320 Gene3D G3DSA:3.40.1010.20 10 287 3.9E-108 T 13-10-2018 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Gene3D G3DSA:3.40.1190.10 110 341 1.1E-79 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Gene3D G3DSA:3.90.190.20 342 494 6.7E-55 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 SUPERFAMILY SSF53244 340 491 2.49E-48 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Pfam PF08245 Mur ligase middle domain 117 318 4.3E-51 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 SUPERFAMILY SSF63418 5 107 1.7E-21 T 13-10-2018 IPR035911 MurE/MurF, N-terminal VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Pfam PF01225 Mur ligase family, catalytic domain 27 105 7.4E-10 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.324 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 SUPERFAMILY SSF53623 112 338 3.14E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Gene3D G3DSA:3.40.1390.10 4 108 1.6E-25 T 13-10-2018 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 3.0E-170 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VAA_03721 1b6b07ba3a1aa5098725bd3492a8d1d1 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 423 2.0E-22 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAA_02961 29338a3f047990d22050e7bf923408f5 888 SUPERFAMILY SSF47384 379 459 3.34E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02961 29338a3f047990d22050e7bf923408f5 888 Pfam PF00072 Response regulator receiver domain 765 878 1.3E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02961 29338a3f047990d22050e7bf923408f5 888 SMART SM00388 393 458 3.9E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02961 29338a3f047990d22050e7bf923408f5 888 SUPERFAMILY SSF55874 447 621 1.27E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02961 29338a3f047990d22050e7bf923408f5 888 Gene3D G3DSA:1.10.287.130 360 456 2.9E-27 T 13-10-2018 VAA_02961 29338a3f047990d22050e7bf923408f5 888 SUPERFAMILY SSF52172 760 881 1.15E-35 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02961 29338a3f047990d22050e7bf923408f5 888 SMART SM00448 763 880 3.7E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02961 29338a3f047990d22050e7bf923408f5 888 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 506 617 2.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02961 29338a3f047990d22050e7bf923408f5 888 SMART SM00387 505 619 2.8E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02961 29338a3f047990d22050e7bf923408f5 888 Gene3D G3DSA:3.40.50.2300 750 884 1.3E-40 T 13-10-2018 VAA_02961 29338a3f047990d22050e7bf923408f5 888 Gene3D G3DSA:3.30.565.10 457 624 7.7E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02961 29338a3f047990d22050e7bf923408f5 888 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 458 4.3E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02961 29338a3f047990d22050e7bf923408f5 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 572 1.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02961 29338a3f047990d22050e7bf923408f5 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 616 1.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02961 29338a3f047990d22050e7bf923408f5 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 558 1.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02961 29338a3f047990d22050e7bf923408f5 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 597 1.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03124 11809dea15840f0d7543f3413849e6a7 408 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 406 40.244 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03124 11809dea15840f0d7543f3413849e6a7 408 TIGRFAM TIGR01224 hutI: imidazolonepropionase 29 404 6.6E-151 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03124 11809dea15840f0d7543f3413849e6a7 408 Pfam PF01979 Amidohydrolase family 65 381 1.9E-15 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAA_03124 11809dea15840f0d7543f3413849e6a7 408 Gene3D G3DSA:3.20.20.140 68 366 9.5E-158 T 13-10-2018 VAA_03124 11809dea15840f0d7543f3413849e6a7 408 SUPERFAMILY SSF51338 5 406 1.94E-24 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAA_03124 11809dea15840f0d7543f3413849e6a7 408 SUPERFAMILY SSF51556 67 366 4.74E-79 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_03124 11809dea15840f0d7543f3413849e6a7 408 Gene3D G3DSA:2.30.40.10 11 403 9.5E-158 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 SUPERFAMILY SSF111326 11 558 2.35E-258 T 13-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 3.9E-84 T 13-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 Hamap MF_00577 Urocanate hydratase [hutU]. 4 558 49.236 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 Pfam PF17392 Urocanase C-terminal domain 354 548 6.8E-92 T 13-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 13-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 3.0E-291 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 Pfam PF17391 Urocanase N-terminal domain 17 143 4.1E-62 T 13-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 Gene3D G3DSA:3.40.1770.10 22 544 1.8E-257 T 13-10-2018 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 Gene3D G3DSA:3.40.50.10730 147 351 1.8E-257 T 13-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03126 60ec6ff46a9cafcd1f10937c534d69da 565 PIRSF PIRSF001423 1 563 6.2E-294 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_02156 92adac74d75329699cc36d15bf22cccf 288 Gene3D G3DSA:3.20.20.410 2 268 3.6E-43 T 13-10-2018 IPR036520 UPF0759 superfamily VAA_02156 92adac74d75329699cc36d15bf22cccf 288 Pfam PF01904 Protein of unknown function DUF72 23 262 4.2E-55 T 13-10-2018 IPR002763 Protein of unknown function DUF72 VAA_02156 92adac74d75329699cc36d15bf22cccf 288 SUPERFAMILY SSF117396 3 265 2.09E-71 T 13-10-2018 IPR036520 UPF0759 superfamily VAA_00355 466157319cc1d6f303c505a951113ff8 150 ProSitePatterns PS00359 Ribosomal protein L11 signature. 135 150 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00355 466157319cc1d6f303c505a951113ff8 150 Gene3D G3DSA:1.10.10.250 81 149 3.2E-24 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VAA_00355 466157319cc1d6f303c505a951113ff8 150 Pfam PF03946 Ribosomal protein L11, N-terminal domain 17 75 1.6E-28 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal VAA_00355 466157319cc1d6f303c505a951113ff8 150 SMART SM00649 17 149 2.0E-79 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VAA_00355 466157319cc1d6f303c505a951113ff8 150 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 13 150 29.656 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VAA_00355 466157319cc1d6f303c505a951113ff8 150 SUPERFAMILY SSF46906 76 149 1.18E-23 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VAA_00355 466157319cc1d6f303c505a951113ff8 150 SUPERFAMILY SSF54747 11 81 2.62E-29 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VAA_00355 466157319cc1d6f303c505a951113ff8 150 Gene3D G3DSA:3.30.1550.10 10 80 4.8E-34 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VAA_00355 466157319cc1d6f303c505a951113ff8 150 Pfam PF00298 Ribosomal protein L11, RNA binding domain 80 148 1.3E-21 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VAA_00355 466157319cc1d6f303c505a951113ff8 150 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 44 81 4.0E-15 T 13-10-2018 VAA_00355 466157319cc1d6f303c505a951113ff8 150 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 11 149 4.2E-63 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03037 be872d366fd62f93ee13594ea8da6a01 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 492 1.2E-163 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA_03037 be872d366fd62f93ee13594ea8da6a01 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 492 6.7E-175 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA_00662 9e2101fb7ad96348032a4732dda667de 635 SUPERFAMILY SSF50447 183 329 2.29E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00662 9e2101fb7ad96348032a4732dda667de 635 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 37 631 3.2E-289 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Gene3D G3DSA:2.40.50.250 515 631 4.3E-129 T 13-10-2018 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Gene3D G3DSA:3.40.50.300 33 230 4.1E-68 T 13-10-2018 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 SUPERFAMILY SSF54980 334 419 1.29E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Pfam PF00009 Elongation factor Tu GTP binding domain 36 227 6.8E-57 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Pfam PF03144 Elongation factor Tu domain 2 251 321 1.1E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Gene3D G3DSA:2.40.30.10 231 331 1.4E-31 T 13-10-2018 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Pfam PF00679 Elongation factor G C-terminus 428 505 6.5E-21 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VAA_00662 9e2101fb7ad96348032a4732dda667de 635 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 36 182 5.6E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 SUPERFAMILY SSF52540 31 239 1.33E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Gene3D G3DSA:3.30.70.870 338 622 4.3E-129 T 13-10-2018 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 76 91 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_00662 9e2101fb7ad96348032a4732dda667de 635 Gene3D G3DSA:3.30.70.240 421 514 4.3E-129 T 13-10-2018 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 SUPERFAMILY SSF54980 430 544 7.19E-27 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00662 9e2101fb7ad96348032a4732dda667de 635 PRINTS PR00315 GTP-binding elongation factor signature 155 164 2.1E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 PRINTS PR00315 GTP-binding elongation factor signature 103 113 2.1E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 PRINTS PR00315 GTP-binding elongation factor signature 119 130 2.1E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 PRINTS PR00315 GTP-binding elongation factor signature 83 91 2.1E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00662 9e2101fb7ad96348032a4732dda667de 635 PRINTS PR00315 GTP-binding elongation factor signature 39 52 2.1E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 SUPERFAMILY SSF53474 3 279 5.22E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 Gene3D G3DSA:3.40.50.1820 11 280 2.4E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 Pfam PF00561 alpha/beta hydrolase fold 32 141 2.5E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00412 Epoxide hydrolase signature 254 276 5.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00412 Epoxide hydrolase signature 115 128 5.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00412 Epoxide hydrolase signature 56 71 5.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 1.8E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 1.8E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 1.8E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_00684 6524b8a5e6ba402a40023143b7b890c2 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.8E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_03631 979be9ff1ae3409440328985b888f09c 367 SMART SM00925 119 252 3.8E-62 T 13-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VAA_03631 979be9ff1ae3409440328985b888f09c 367 Pfam PF06725 3D domain 272 348 3.6E-21 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VAA_03631 979be9ff1ae3409440328985b888f09c 367 Gene3D G3DSA:2.40.240.50 119 257 3.8E-136 T 13-10-2018 VAA_03631 979be9ff1ae3409440328985b888f09c 367 Gene3D G3DSA:2.40.40.10 51 348 3.8E-136 T 13-10-2018 IPR036908 RlpA-like domain superfamily VAA_03631 979be9ff1ae3409440328985b888f09c 367 Pfam PF03562 MltA specific insert domain 69 251 5.1E-36 T 13-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VAA_03631 979be9ff1ae3409440328985b888f09c 367 SUPERFAMILY SSF50685 20 350 4.19E-101 T 13-10-2018 IPR036908 RlpA-like domain superfamily VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 13-10-2018 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 SMART SM00662 23 235 5.7E-103 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.3E-111 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 SUPERFAMILY SSF56553 53 179 2.44E-40 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 13-10-2018 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Gene3D G3DSA:3.30.1360.10 17 229 2.1E-83 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 SUPERFAMILY SSF55257 7 234 3.93E-30 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 1.2E-23 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Gene3D G3DSA:2.170.120.12 53 178 2.1E-83 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.681 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02695 a6ed928bd72fd3a037d901fc13a0968b 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 SUPERFAMILY SSF46689 409 519 8.24E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 Gene3D G3DSA:1.10.10.60 469 521 1.2E-11 T 13-10-2018 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 SMART SM00382 215 358 3.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02844 ccac8e3de872d13b409f7a5806399130 522 Pfam PF00158 Sigma-54 interaction domain 195 361 9.2E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 Pfam PF02954 Bacterial regulatory protein, Fis family 478 516 4.4E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 Gene3D G3DSA:3.40.50.300 181 366 1.3E-63 T 13-10-2018 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 Gene3D G3DSA:1.10.8.60 368 436 1.8E-15 T 13-10-2018 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 483 500 5.1E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 500 520 5.1E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAA_02844 ccac8e3de872d13b409f7a5806399130 522 SUPERFAMILY SSF52540 195 429 1.16E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02844 ccac8e3de872d13b409f7a5806399130 522 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 545 1.8E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Pfam PF09308 LuxQ, periplasmic 41 278 4.3E-102 T 13-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 702 2.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SUPERFAMILY SSF47384 468 546 9.02E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SUPERFAMILY SSF103190 52 270 1.18E-67 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SUPERFAMILY SSF55874 534 705 3.41E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Gene3D G3DSA:3.30.450.220 51 207 1.2E-57 T 13-10-2018 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 643 2.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 701 2.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 682 2.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 657 2.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Gene3D G3DSA:1.10.287.130 473 545 1.4E-21 T 13-10-2018 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SMART SM00387 592 704 1.1E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SUPERFAMILY SSF55785 348 458 6.88E-6 T 13-10-2018 IPR035965 PAS domain superfamily VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Gene3D G3DSA:3.30.565.10 546 707 3.8E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Pfam PF00072 Response regulator receiver domain 730 839 1.2E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Gene3D G3DSA:3.40.50.2300 721 848 4.8E-29 T 13-10-2018 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SMART SM00448 728 840 6.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SMART SM00388 480 545 1.0E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Gene3D G3DSA:3.30.450.20 345 472 2.6E-7 T 13-10-2018 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 358 0.0 T 13-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 Gene3D G3DSA:2.20.20.100 208 272 5.2E-6 T 13-10-2018 VAA_01548 a8e61243cd4948d9a24a902c6283b844 848 SUPERFAMILY SSF52172 726 845 2.99E-28 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Gene3D G3DSA:3.30.230.80 237 404 1.0E-69 T 13-10-2018 VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 1.6E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Gene3D G3DSA:3.40.50.11260 405 494 1.0E-34 T 13-10-2018 VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 SUPERFAMILY SSF54211 238 493 2.35E-98 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 SMART SM00387 32 189 6.7E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 SUPERFAMILY SSF55874 10 218 2.62E-63 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 3.6E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 PIRSF PIRSF002583 1 635 2.1E-213 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Gene3D G3DSA:3.30.565.10 6 220 2.8E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Pfam PF00183 Hsp90 protein 227 632 4.2E-127 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 SUPERFAMILY SSF110942 520 632 4.84E-33 T 13-10-2018 IPR037196 HSP90, C-terminal domain VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.275 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VAA_02110 a263c0f45bebc84f5aae58c76014aca6 635 Gene3D G3DSA:1.20.120.790 500 632 1.7E-41 T 13-10-2018 IPR037196 HSP90, C-terminal domain VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Pfam PF13604 AAA domain 240 401 2.9E-30 T 13-10-2018 VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Gene3D G3DSA:3.40.50.300 453 573 2.6E-24 T 13-10-2018 VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 701 49.322 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Gene3D G3DSA:3.40.50.300 202 443 1.0E-72 T 13-10-2018 VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Gene3D G3DSA:1.10.10.1020 4 128 1.4E-21 T 13-10-2018 VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Pfam PF13538 UvrD-like helicase C-terminal domain 632 678 5.6E-14 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 SUPERFAMILY SSF52540 238 699 1.66E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 Gene3D G3DSA:3.40.50.300 596 693 3.0E-19 T 13-10-2018 VAA_03635 7934c2cb44c11ce1595f8a7de2e0d32a 708 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 703 1.1E-214 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 1.6E-48 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.0E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.0E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.0E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.0E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.0E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 SMART SM00863 171 220 7.1E-19 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 33.705 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Pfam PF03129 Anticodon binding domain 542 631 3.1E-22 T 13-10-2018 IPR004154 Anticodon-binding VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Gene3D G3DSA:3.40.50.800 533 642 6.2E-31 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Gene3D G3DSA:3.30.930.10 224 532 1.0E-127 T 13-10-2018 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 SUPERFAMILY SSF81271 3 61 6.87E-15 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Gene3D G3DSA:3.30.54.20 131 188 1.2E-62 T 13-10-2018 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 SUPERFAMILY SSF55681 244 527 2.99E-97 T 13-10-2018 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 3.1E-239 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Gene3D G3DSA:3.10.20.30 3 62 1.4E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Gene3D G3DSA:3.30.980.10 70 223 1.2E-62 T 13-10-2018 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 SUPERFAMILY SSF52954 530 637 8.46E-32 T 13-10-2018 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 SUPERFAMILY SSF55186 65 242 2.49E-62 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VAA_01068 b7901c1bea4bc506bc0338f6d81e3a4f 642 Pfam PF02824 TGS domain 4 61 2.4E-10 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 SUPERFAMILY SSF53738 4 182 3.3E-49 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Gene3D G3DSA:3.40.120.10 176 363 2.6E-62 T 13-10-2018 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Gene3D G3DSA:3.30.310.50 371 446 6.3E-25 T 13-10-2018 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 1.3E-19 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 SUPERFAMILY SSF55957 358 445 1.44E-22 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Gene3D G3DSA:3.40.120.10 4 155 2.5E-49 T 13-10-2018 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 4.2E-31 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Gene3D G3DSA:3.40.120.10 258 340 2.6E-62 T 13-10-2018 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 SUPERFAMILY SSF53738 157 257 3.92E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 4.9E-46 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 47.168 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 4.9E-203 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 SUPERFAMILY SSF53738 259 366 3.85E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.1E-14 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.1E-14 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.1E-14 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00800 e7844c07eecb4202e5fb0ef454e02955 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 7.5E-12 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 SUPERFAMILY SSF48498 86 192 1.48E-15 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 3.1E-73 T 13-10-2018 IPR017757 Transcriptional repressor BetI VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.6E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 SUPERFAMILY SSF46689 5 80 7.7E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 91.941 T 13-10-2018 IPR017757 Transcriptional repressor BetI VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 Gene3D G3DSA:1.10.357.10 5 195 8.4E-42 T 13-10-2018 VAA_01523 d8a9ec9f05b910c3a6037a11b2e5dd0e 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 86 192 1.4E-29 T 13-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal VAA_02380 88dd0ace135ddba55079712cf2919309 166 SUPERFAMILY SSF55040 11 155 6.67E-61 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_02380 88dd0ace135ddba55079712cf2919309 166 Gene3D G3DSA:3.30.70.640 1 161 3.6E-70 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_02380 88dd0ace135ddba55079712cf2919309 166 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.4E-71 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_02380 88dd0ace135ddba55079712cf2919309 166 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.791 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_02380 88dd0ace135ddba55079712cf2919309 166 Pfam PF01967 MoaC family 15 150 3.3E-56 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Gene3D G3DSA:1.10.10.60 381 467 5.1E-26 T 13-10-2018 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 6.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 6.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Gene3D G3DSA:3.40.50.300 126 312 3.2E-67 T 13-10-2018 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.4E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 SUPERFAMILY SSF52540 141 385 5.43E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Gene3D G3DSA:1.10.8.60 313 380 2.9E-17 T 13-10-2018 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Pfam PF00158 Sigma-54 interaction domain 142 309 3.1E-71 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 SUPERFAMILY SSF52172 2 187 7.68E-43 T 13-10-2018 IPR011006 CheY-like superfamily VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 SMART SM00448 4 115 5.5E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Pfam PF00072 Response regulator receiver domain 6 115 2.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 SMART SM00382 162 313 9.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 2.0E-242 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 SUPERFAMILY SSF46689 383 466 1.54E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 Gene3D G3DSA:3.40.50.2300 1 124 2.3E-40 T 13-10-2018 VAA_0067 eb381b6206eb39e4759ad5e9376b63de 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 SMART SM00228 247 324 1.9E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 SMART SM00245 327 528 7.4E-68 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 6.9E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 663 1.1E-40 T 13-10-2018 IPR020992 Tail specific protease, C-terminal VAA_01871 e34633aae597a65e1100a9c8372b5608 664 Gene3D G3DSA:3.90.226.10 325 544 1.2E-58 T 13-10-2018 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 Gene3D G3DSA:2.30.42.10 237 321 2.0E-11 T 13-10-2018 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 SUPERFAMILY SSF52096 166 540 1.18E-72 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_01871 e34633aae597a65e1100a9c8372b5608 664 Pfam PF08180 B melanoma antigen family 9 37 1.2E-13 T 13-10-2018 IPR012530 B melanoma antigen-like VAA_01871 e34633aae597a65e1100a9c8372b5608 664 Pfam PF03572 Peptidase family S41 357 526 1.4E-52 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 SUPERFAMILY SSF50156 218 338 1.44E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_01871 e34633aae597a65e1100a9c8372b5608 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 2.6E-114 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VAA_02475 e2e026f148bcd247356c3545ce435c79 313 Gene3D G3DSA:3.90.25.10 173 295 1.4E-113 T 13-10-2018 VAA_02475 e2e026f148bcd247356c3545ce435c79 313 SUPERFAMILY SSF51735 1 308 4.34E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02475 e2e026f148bcd247356c3545ce435c79 313 Gene3D G3DSA:3.40.50.720 3 307 1.4E-113 T 13-10-2018 VAA_02475 e2e026f148bcd247356c3545ce435c79 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 45.883 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VAA_02475 e2e026f148bcd247356c3545ce435c79 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 312 1.2E-125 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VAA_02475 e2e026f148bcd247356c3545ce435c79 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 4.1E-46 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAA_02923 1ade36c01c0394ec934bc408285d7889 758 Pfam PF01483 Proprotein convertase P-domain 619 704 1.8E-15 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VAA_02923 1ade36c01c0394ec934bc408285d7889 758 Gene3D G3DSA:2.60.120.260 581 713 3.0E-14 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_02923 1ade36c01c0394ec934bc408285d7889 758 SUPERFAMILY SSF55486 175 475 1.67E-36 T 13-10-2018 VAA_02923 1ade36c01c0394ec934bc408285d7889 758 Pfam PF02128 Fungalysin metallopeptidase (M36) 299 465 2.4E-5 T 13-10-2018 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 VAA_02923 1ade36c01c0394ec934bc408285d7889 758 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 725 746 0.0014 T 13-10-2018 IPR020008 GlyGly-CTERM domain VAA_02923 1ade36c01c0394ec934bc408285d7889 758 SUPERFAMILY SSF49785 590 704 2.59E-18 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 Gene3D G3DSA:3.40.50.980 192 364 9.7E-52 T 13-10-2018 VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 Gene3D G3DSA:3.40.50.980 28 181 6.8E-35 T 13-10-2018 VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 9 538 1.6E-241 T 13-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 Pfam PF00501 AMP-binding enzyme 37 446 2.3E-76 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 198 209 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 531 1.7E-15 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 SUPERFAMILY SSF56801 12 541 6.28E-130 T 13-10-2018 VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 Gene3D G3DSA:3.30.300.310 442 543 9.0E-30 T 13-10-2018 VAA_02394 d1d2bfdee3ab15294fe219d563d1afaf 543 Gene3D G3DSA:2.30.38.10 365 440 6.2E-24 T 13-10-2018 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Gene3D G3DSA:2.40.50.140 1 65 7.8E-27 T 13-10-2018 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Gene3D G3DSA:1.10.8.10 159 206 1.4E-21 T 13-10-2018 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 206 31.421 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 SMART SM00278 108 127 0.071 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 SMART SM00278 73 92 540.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 2.3E-63 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 SUPERFAMILY SSF46929 160 205 1.57E-11 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 SUPERFAMILY SSF50249 2 63 3.6E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Gene3D G3DSA:1.10.150.20 67 143 2.9E-25 T 13-10-2018 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Pfam PF01330 RuvA N terminal domain 2 62 4.7E-20 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Pfam PF07499 RuvA, C-terminal domain 162 205 3.3E-15 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.6E-13 T 13-10-2018 VAA_03164 12c6146f5b6dde60ac5f3feb5d94d199 206 SUPERFAMILY SSF47781 66 136 1.72E-19 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PIRSF PIRSF001336 15 654 1.3E-251 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 Gene3D G3DSA:1.20.58.930 386 481 1.8E-236 T 13-10-2018 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 95 364 1.1E-51 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 TIGRFAM TIGR01273 speA: arginine decarboxylase 25 652 9.6E-272 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 Gene3D G3DSA:3.20.20.10 85 369 1.8E-236 T 13-10-2018 IPR029066 PLP-binding barrel VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 21 653 42.302 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 563 584 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 193 214 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 485 506 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 167 182 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 344 361 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 108 122 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 217 239 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 510 535 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01180 Arginine decarboxylase signature 84 99 2.4E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 116 134 6.7E-13 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 563 576 6.7E-13 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 373 6.7E-13 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 260 273 6.7E-13 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 Gene3D G3DSA:2.40.37.10 32 590 1.8E-236 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_00893 d6a6a403c5cd39b527dab34d92fcf7cc 654 SUPERFAMILY SSF51419 84 366 6.05E-65 T 13-10-2018 IPR029066 PLP-binding barrel VAA_02904 7997c4072717ba86084cfb477f07c7fe 247 Gene3D G3DSA:2.40.10.220 137 247 1.7E-41 T 13-10-2018 VAA_02904 7997c4072717ba86084cfb477f07c7fe 247 SUPERFAMILY SSF141371 138 246 7.19E-30 T 13-10-2018 VAA_02904 7997c4072717ba86084cfb477f07c7fe 247 SUPERFAMILY SSF141371 24 137 1.22E-31 T 13-10-2018 VAA_02904 7997c4072717ba86084cfb477f07c7fe 247 Pfam PF07238 PilZ domain 134 233 6.5E-12 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VAA_02904 7997c4072717ba86084cfb477f07c7fe 247 Gene3D G3DSA:2.30.110.10 23 136 6.2E-47 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAA_02904 7997c4072717ba86084cfb477f07c7fe 247 Pfam PF12945 Flagellar protein YcgR 40 127 8.9E-14 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 SUPERFAMILY SSF52172 6 153 4.41E-39 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 SUPERFAMILY SSF55073 156 317 5.96E-45 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 Gene3D G3DSA:3.40.50.2300 2 139 1.1E-35 T 13-10-2018 VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 Gene3D G3DSA:3.30.70.270 140 315 2.7E-51 T 13-10-2018 VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 SMART SM00267 140 316 9.5E-55 T 13-10-2018 IPR000160 GGDEF domain VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 312 5.8E-47 T 13-10-2018 IPR000160 GGDEF domain VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 311 2.9E-46 T 13-10-2018 IPR000160 GGDEF domain VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 SMART SM00448 8 120 3.4E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01579 c0201009678ecf47f32e2e74d54c09db 324 Pfam PF00072 Response regulator receiver domain 10 117 2.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 206 4.7E-13 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 4.8E-62 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 SUPERFAMILY SSF53790 223 282 4.22E-5 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 SUPERFAMILY SSF51735 1 113 2.84E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 1.9E-8 T 13-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 SUPERFAMILY SSF75615 115 199 8.89E-24 T 13-10-2018 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 Gene3D G3DSA:3.40.50.720 1 113 4.8E-34 T 13-10-2018 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 Gene3D G3DSA:1.10.8.210 150 209 4.3E-9 T 13-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 Gene3D G3DSA:3.30.160.110 114 149 2.9E-14 T 13-10-2018 VAA_01887 36ea03a05df123d8d0c826581df5ed32 306 Pfam PF13241 Putative NAD(P)-binding 6 116 8.7E-29 T 13-10-2018 VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 SUPERFAMILY SSF82861 54 139 8.11E-17 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 SUPERFAMILY SSF50182 141 206 7.85E-19 T 13-10-2018 IPR010920 LSM domain superfamily VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 Pfam PF00924 Mechanosensitive ion channel 98 295 2.0E-62 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 Gene3D G3DSA:3.30.70.100 206 300 4.4E-30 T 13-10-2018 VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 Pfam PF05552 Conserved TM helix 42 90 1.4E-11 T 13-10-2018 IPR008910 Conserved TM helix VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 SUPERFAMILY SSF82689 207 305 5.1E-35 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 Gene3D G3DSA:2.30.30.60 156 205 7.5E-23 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VAA_00183 9df1acb479143a2e4c479b2b4e7a6eab 308 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 170 204 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 2.4E-45 T 13-10-2018 IPR000160 GGDEF domain VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 Gene3D G3DSA:3.20.20.450 415 667 5.7E-94 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 SUPERFAMILY SSF55073 247 404 5.65E-49 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 1.9E-39 T 13-10-2018 IPR000160 GGDEF domain VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 SMART SM00052 412 660 1.2E-102 T 13-10-2018 IPR001633 EAL domain VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 SUPERFAMILY SSF141868 418 667 1.31E-86 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 Gene3D G3DSA:3.30.70.270 236 414 1.9E-58 T 13-10-2018 VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 SMART SM00267 231 402 5.1E-61 T 13-10-2018 IPR000160 GGDEF domain VAA_00383 a0f9fbc04b25e1faf4a1f5902ffa8918 683 Pfam PF00563 EAL domain 420 655 4.1E-72 T 13-10-2018 IPR001633 EAL domain VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 SMART SM00851 32 125 4.0E-24 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 18 157 1.8E-65 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 PIRSF PIRSF006614 15 158 1.6E-64 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 Gene3D G3DSA:3.40.50.1380 8 158 2.9E-67 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 19 138 33.061 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 SUPERFAMILY SSF52335 11 157 1.03E-57 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 ProSitePatterns PS01335 Methylglyoxal synthase active site. 72 80 - T 13-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VAA_01557 cc54579e853d8ac2d57e918e016b7d3a 158 Pfam PF02142 MGS-like domain 32 125 7.3E-19 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VAA_04296 99d361d2481923e7b433baa116efa311 670 SMART SM00304 340 393 0.0029 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_04296 99d361d2481923e7b433baa116efa311 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 633 2.0E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_04296 99d361d2481923e7b433baa116efa311 670 Gene3D G3DSA:1.10.287.950 340 670 5.1E-62 T 13-10-2018 VAA_04296 99d361d2481923e7b433baa116efa311 670 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 167 5.8E-13 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAA_04296 99d361d2481923e7b433baa116efa311 670 Pfam PF12729 Four helix bundle sensory module for signal transduction 197 311 1.2E-6 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAA_04296 99d361d2481923e7b433baa116efa311 670 SMART SM00283 408 669 1.2E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_04296 99d361d2481923e7b433baa116efa311 670 SUPERFAMILY SSF58104 369 670 2.22E-58 T 13-10-2018 VAA_00462 3c698391fcc44bb5b27fd546c09b59d4 130 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 123 5.1E-11 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_00462 3c698391fcc44bb5b27fd546c09b59d4 130 Gene3D G3DSA:3.50.50.60 4 125 1.5E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00462 3c698391fcc44bb5b27fd546c09b59d4 130 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 6.8E-11 T 13-10-2018 VAA_00462 3c698391fcc44bb5b27fd546c09b59d4 130 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 6.8E-11 T 13-10-2018 VAA_00462 3c698391fcc44bb5b27fd546c09b59d4 130 SUPERFAMILY SSF51905 5 123 1.81E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 327 21.918 T 13-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 Pfam PF13378 Enolase C-terminal domain-like 130 285 3.0E-13 T 13-10-2018 IPR029065 Enolase C-terminal domain-like VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 SUPERFAMILY SSF54826 1 100 1.62E-24 T 13-10-2018 VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 SUPERFAMILY SSF51604 105 308 7.86E-47 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 Gene3D G3DSA:3.20.20.120 99 301 6.1E-115 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 Gene3D G3DSA:3.30.390.10 3 307 6.1E-115 T 13-10-2018 IPR029017 Enolase-like, N-terminal VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 313 2.9E-113 T 13-10-2018 VAA_03314 2c1b0c9c38354730e3c1353eaadc6623 332 SMART SM00922 116 212 1.1E-8 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VAA_01100 9c35ed44460e912b8e76385857ff606e 260 SUPERFAMILY SSF50685 76 165 5.55E-9 T 13-10-2018 IPR036908 RlpA-like domain superfamily VAA_01100 9c35ed44460e912b8e76385857ff606e 260 Pfam PF03330 Lytic transglycolase 77 165 4.1E-27 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VAA_01100 9c35ed44460e912b8e76385857ff606e 260 Pfam PF05036 Sporulation related domain 185 253 8.9E-8 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAA_01100 9c35ed44460e912b8e76385857ff606e 260 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 183 1.0E-45 T 13-10-2018 IPR012997 Rare lipoprotein A VAA_01100 9c35ed44460e912b8e76385857ff606e 260 SUPERFAMILY SSF110997 182 255 1.19E-11 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_01100 9c35ed44460e912b8e76385857ff606e 260 Gene3D G3DSA:2.40.40.10 76 170 6.3E-39 T 13-10-2018 IPR036908 RlpA-like domain superfamily VAA_01100 9c35ed44460e912b8e76385857ff606e 260 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 19 169 25.236 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VAA_01100 9c35ed44460e912b8e76385857ff606e 260 Gene3D G3DSA:3.30.70.1070 177 256 3.7E-7 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_04314 5c883ec4c294578aac840da2a3e39be5 292 SUPERFAMILY SSF53822 6 292 1.8E-86 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_04314 5c883ec4c294578aac840da2a3e39be5 292 Gene3D G3DSA:3.40.50.2300 32 278 4.9E-97 T 13-10-2018 VAA_04314 5c883ec4c294578aac840da2a3e39be5 292 Gene3D G3DSA:3.40.50.2300 125 259 4.9E-97 T 13-10-2018 VAA_04314 5c883ec4c294578aac840da2a3e39be5 292 Pfam PF13407 Periplasmic binding protein domain 28 277 4.6E-61 T 13-10-2018 IPR025997 Periplasmic binding protein VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.30.300.30 72 180 1.1E-26 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF56801 1 205 2.35E-54 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF47336 1704 1773 2.75E-14 T 13-10-2018 IPR036736 ACP-like superfamily VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.30.300.30 1587 1697 1.2E-30 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF53474 1780 2025 2.73E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.40.50.12780 1172 1586 1.4E-131 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 565 723 7.0E-23 T 13-10-2018 IPR010060 Non-ribosomal peptide synthase VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00501 AMP-binding enzyme 1190 1592 5.3E-93 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00501 AMP-binding enzyme 1 78 1.7E-20 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1731 1746 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1208 1616 1.1E-128 T 13-10-2018 IPR010071 Amino acid adenylation domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.30.559.30 920 1159 2.3E-94 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF52777 274 437 2.78E-17 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF52777 448 701 1.78E-26 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SMART SM00824 Thioesterase 1801 1989 1.5E-4 T 13-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00668 Condensation domain 737 1159 2.7E-69 T 13-10-2018 IPR001242 Condensation domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00668 Condensation domain 279 697 2.3E-36 T 13-10-2018 IPR001242 Condensation domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.40.50.1820 1698 2027 3.9E-99 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00975 Thioesterase domain 1800 2018 1.0E-31 T 13-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00550 Phosphopantetheine attachment site 194 253 1.9E-7 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF00550 Phosphopantetheine attachment site 1709 1771 9.5E-12 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF56801 1171 1719 2.62E-144 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.30.559.30 435 700 3.2E-48 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF13193 AMP-binding enzyme C-terminal domain 87 167 7.8E-7 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Pfam PF13193 AMP-binding enzyme C-terminal domain 1600 1682 5.8E-8 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SMART SM00823 Phosphopantetheine attachment site 192 249 0.017 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SMART SM00823 Phosphopantetheine attachment site 1707 1776 0.0047 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:2.30.38.10 1 71 9.0E-28 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF47336 185 253 1.83E-13 T 13-10-2018 IPR036736 ACP-like superfamily VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF52777 925 1152 2.56E-40 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:1.10.1200.10 181 260 9.9E-16 T 13-10-2018 IPR036736 ACP-like superfamily VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1327 1338 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.30.559.10 261 430 8.0E-22 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 SUPERFAMILY SSF52777 735 934 1.33E-31 T 13-10-2018 VAA_02398 f75ef31d8939954dfe1ae47773053729 2033 Gene3D G3DSA:3.30.559.10 743 1103 2.3E-94 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAA_02550 82f614ea726068f75c0e44fef5d550db 396 Gene3D G3DSA:1.20.1250.20 5 185 5.1E-15 T 13-10-2018 VAA_02550 82f614ea726068f75c0e44fef5d550db 396 Pfam PF12832 MFS_1 like family 13 361 5.5E-40 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain VAA_02550 82f614ea726068f75c0e44fef5d550db 396 SUPERFAMILY SSF103473 8 373 2.09E-32 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_02550 82f614ea726068f75c0e44fef5d550db 396 Gene3D G3DSA:1.20.1250.20 195 382 1.1E-33 T 13-10-2018 VAA_02550 82f614ea726068f75c0e44fef5d550db 396 PIRSF PIRSF004925 1 388 9.9E-104 T 13-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VAA_01174 6550a631e738768fe577f2fe449262b2 85 SUPERFAMILY SSF143800 2 82 2.83E-22 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01174 6550a631e738768fe577f2fe449262b2 85 Pfam PF01197 Ribosomal protein L31 2 80 3.0E-26 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01174 6550a631e738768fe577f2fe449262b2 85 PRINTS PR01249 Ribosomal protein L31 signature 3 20 1.5E-15 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01174 6550a631e738768fe577f2fe449262b2 85 PRINTS PR01249 Ribosomal protein L31 signature 61 79 1.5E-15 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01174 6550a631e738768fe577f2fe449262b2 85 PRINTS PR01249 Ribosomal protein L31 signature 46 61 1.5E-15 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01174 6550a631e738768fe577f2fe449262b2 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 81 3.6E-18 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01174 6550a631e738768fe577f2fe449262b2 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 50 71 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01174 6550a631e738768fe577f2fe449262b2 85 Gene3D G3DSA:2.30.170.50 2 85 8.8E-24 T 13-10-2018 VAA_01174 6550a631e738768fe577f2fe449262b2 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 2 82 27.558 T 13-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Pfam PF01556 DnaJ C terminal domain 127 339 6.3E-46 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 366 41.709 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Gene3D G3DSA:2.10.230.10 145 215 3.5E-24 T 13-10-2018 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 SMART SM00271 9 67 1.3E-29 T 13-10-2018 IPR001623 DnaJ domain VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Gene3D G3DSA:1.10.287.110 6 120 4.4E-35 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 SUPERFAMILY SSF49493 265 350 7.46E-23 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Pfam PF00684 DnaJ central domain 153 213 8.5E-15 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 355 2.3E-139 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 13-10-2018 IPR018253 DnaJ domain, conserved site VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 SUPERFAMILY SSF57938 140 216 4.58E-22 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 SUPERFAMILY SSF46565 3 113 1.15E-35 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Gene3D G3DSA:2.60.260.20 261 366 5.3E-29 T 13-10-2018 VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 Pfam PF00226 DnaJ domain 10 72 2.8E-26 T 13-10-2018 IPR001623 DnaJ domain VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 PRINTS PR00625 DnaJ domain signature 67 86 4.1E-32 T 13-10-2018 IPR001623 DnaJ domain VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 PRINTS PR00625 DnaJ domain signature 47 67 4.1E-32 T 13-10-2018 IPR001623 DnaJ domain VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 PRINTS PR00625 DnaJ domain signature 12 30 4.1E-32 T 13-10-2018 IPR001623 DnaJ domain VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 PRINTS PR00625 DnaJ domain signature 30 45 4.1E-32 T 13-10-2018 IPR001623 DnaJ domain VAA_01196 da29039a85e6d1eedb07e32fbc774bff 367 SUPERFAMILY SSF49493 120 266 7.33E-20 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VAA_01643 913f133f09afc120be2716a240650851 564 Pfam PF11398 Protein of unknown function (DUF2813) 22 388 1.4E-149 T 13-10-2018 IPR022602 Protein of unknown function DUF2813 VAA_01643 913f133f09afc120be2716a240650851 564 SUPERFAMILY SSF52540 22 345 2.71E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01643 913f133f09afc120be2716a240650851 564 Gene3D G3DSA:3.40.50.300 22 351 2.0E-15 T 13-10-2018 VAA_00786 da9c9e956a23fe3380c3e17ba3446dbc 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 13 113 1.4E-17 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VAA_00786 da9c9e956a23fe3380c3e17ba3446dbc 118 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 5 118 35.53 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VAA_00786 da9c9e956a23fe3380c3e17ba3446dbc 118 Gene3D G3DSA:2.60.300.12 13 118 9.6E-32 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAA_00786 da9c9e956a23fe3380c3e17ba3446dbc 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 118 4.0E-36 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VAA_00786 da9c9e956a23fe3380c3e17ba3446dbc 118 SUPERFAMILY SSF89360 11 104 3.73E-29 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAA_00786 da9c9e956a23fe3380c3e17ba3446dbc 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 99 116 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 62 71 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 SUPERFAMILY SSF52141 9 226 1.88E-96 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 9 226 40.175 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 SMART SM00986 54 215 6.2E-41 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 SMART SM00987 54 215 6.2E-41 T 13-10-2018 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 Gene3D G3DSA:3.40.470.10 6 231 2.6E-104 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 Pfam PF03167 Uracil DNA glycosylase superfamily 60 214 5.6E-25 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03679 f23e0d92fe3ff0985a516f03a07fbb3b 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 219 1.4E-86 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 Gene3D G3DSA:3.40.50.1220 197 367 1.8E-60 T 13-10-2018 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 Gene3D G3DSA:3.40.50.970 370 579 5.5E-65 T 13-10-2018 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 10 574 6.8E-274 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 178 1.8E-58 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 203 337 6.4E-47 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 Gene3D G3DSA:3.40.50.970 1 186 2.3E-74 T 13-10-2018 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 SUPERFAMILY SSF52467 196 369 2.46E-63 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 438 457 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 SUPERFAMILY SSF52518 7 188 7.15E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 SUPERFAMILY SSF52518 378 572 4.76E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03796 a199e53d2bc28248c1da92b9ff7c3685 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 401 550 2.2E-49 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 9.0E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 Gene3D G3DSA:3.40.190.290 89 296 1.0E-62 T 13-10-2018 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 54.494 T 13-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VAA_00181 e0c7505f3a65030c70d4e102781db518 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 Pfam PF03466 LysR substrate binding domain 97 257 7.7E-12 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00181 e0c7505f3a65030c70d4e102781db518 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 1.2E-104 T 13-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VAA_00181 e0c7505f3a65030c70d4e102781db518 298 Gene3D G3DSA:1.10.10.10 2 85 2.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00181 e0c7505f3a65030c70d4e102781db518 298 SUPERFAMILY SSF53850 95 295 8.32E-21 T 13-10-2018 VAA_00181 e0c7505f3a65030c70d4e102781db518 298 SUPERFAMILY SSF46785 4 112 2.56E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02078 32163481aec7a28f51da69a2076493e3 446 SUPERFAMILY SSF53474 196 442 1.8E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02078 32163481aec7a28f51da69a2076493e3 446 Pfam PF00756 Putative esterase 208 438 2.7E-35 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VAA_02078 32163481aec7a28f51da69a2076493e3 446 Pfam PF11806 Domain of unknown function (DUF3327) 58 186 7.3E-35 T 13-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 VAA_02078 32163481aec7a28f51da69a2076493e3 446 SUPERFAMILY SSF81296 30 180 6.3E-38 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_02078 32163481aec7a28f51da69a2076493e3 446 Gene3D G3DSA:3.40.50.1820 176 444 5.1E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02078 32163481aec7a28f51da69a2076493e3 446 Gene3D G3DSA:2.60.40.10 25 174 2.9E-38 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 SUPERFAMILY SSF49299 838 916 1.44E-9 T 13-10-2018 IPR035986 PKD domain superfamily VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 SUPERFAMILY SSF55486 212 386 4.65E-20 T 13-10-2018 VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 SMART SM00089 841 917 4.0E-13 T 13-10-2018 IPR022409 PKD/Chitinase domain VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 SMART SM00089 749 838 3.5E-18 T 13-10-2018 IPR022409 PKD/Chitinase domain VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 Pfam PF05547 Immune inhibitor A peptidase M6 107 747 3.0E-279 T 13-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 Gene3D G3DSA:2.60.40.10 838 918 1.8E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 Gene3D G3DSA:2.60.40.10 753 837 1.8E-28 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 121 443 1.7E-81 T 13-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 Pfam PF00801 PKD domain 778 828 4.6E-10 T 13-10-2018 IPR000601 PKD domain VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 Pfam PF00801 PKD domain 843 909 2.5E-8 T 13-10-2018 IPR000601 PKD domain VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 PIRSF PIRSF007519 1 767 0.0 T 13-10-2018 IPR012300 Peptidase M6, InhA VAA_02995 658e3f4ed6e0dde4ddac5ce5cfcb0454 918 SUPERFAMILY SSF49299 751 838 5.89E-19 T 13-10-2018 IPR035986 PKD domain superfamily VAA_03050 db377efd45edbf09ae8ba13879e2f5da 72 SUPERFAMILY SSF47413 15 71 2.45E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_03050 db377efd45edbf09ae8ba13879e2f5da 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 19 71 2.8E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_03050 db377efd45edbf09ae8ba13879e2f5da 72 Gene3D G3DSA:1.10.260.40 2 72 4.8E-8 T 13-10-2018 VAA_03050 db377efd45edbf09ae8ba13879e2f5da 72 SMART SM00530 5 67 0.0032 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 Gene3D G3DSA:3.40.309.10 223 373 2.6E-153 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.221 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 Gene3D G3DSA:3.40.605.10 15 408 2.6E-153 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 5.7E-168 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 PIRSF PIRSF000151 2 416 2.0E-166 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 SUPERFAMILY SSF53720 5 408 7.59E-112 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 Pfam PF00171 Aldehyde dehydrogenase family 8 279 8.7E-16 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_03592 8f1415a6c5383b2994839d47a343ac58 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 SMART SM01134 72 234 8.9E-67 T 13-10-2018 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 Gene3D G3DSA:3.30.750.70 70 136 2.8E-7 T 13-10-2018 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.8E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.8E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 SUPERFAMILY SSF46785 5 72 4.55E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 SMART SM00420 6 58 3.1E-26 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 Gene3D G3DSA:1.10.10.10 1 69 2.5E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.6E-51 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 SUPERFAMILY SSF100950 73 234 2.86E-26 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VAA_01244 7e9874e8806eca7a687209dab74d81a3 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.6E-23 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_03081 e1c791e2b7f9a3c697c9357a3d921de0 200 PIRSF PIRSF000709 8 193 0.008 T 13-10-2018 VAA_03081 e1c791e2b7f9a3c697c9357a3d921de0 200 SMART SM00855 3 153 7.6E-12 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAA_03081 e1c791e2b7f9a3c697c9357a3d921de0 200 Gene3D G3DSA:3.40.50.1240 1 200 2.5E-47 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VAA_03081 e1c791e2b7f9a3c697c9357a3d921de0 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 3.9E-30 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAA_03081 e1c791e2b7f9a3c697c9357a3d921de0 200 SUPERFAMILY SSF53254 3 181 1.43E-33 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VAA_00212 c3eb1c9c134b79e8545534321f3b9a58 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 86 102 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VAA_00212 c3eb1c9c134b79e8545534321f3b9a58 418 SUPERFAMILY SSF103473 28 407 4.32E-58 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00212 c3eb1c9c134b79e8545534321f3b9a58 418 Pfam PF07690 Major Facilitator Superfamily 36 374 3.0E-47 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_00212 c3eb1c9c134b79e8545534321f3b9a58 418 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 30 380 5.8E-68 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VAA_00212 c3eb1c9c134b79e8545534321f3b9a58 418 Gene3D G3DSA:1.20.1720.10 33 407 9.7E-89 T 13-10-2018 VAA_00752 1d4ff1cac8dee1035a1a790345deb3c9 168 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00752 1d4ff1cac8dee1035a1a790345deb3c9 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.3E-46 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00752 1d4ff1cac8dee1035a1a790345deb3c9 168 SUPERFAMILY SSF55083 1 157 3.27E-54 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00752 1d4ff1cac8dee1035a1a790345deb3c9 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.4E-37 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00752 1d4ff1cac8dee1035a1a790345deb3c9 168 Gene3D G3DSA:3.30.70.560 1 159 6.4E-58 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Pfam PF00271 Helicase conserved C-terminal domain 422 536 2.3E-6 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 SUPERFAMILY SSF52540 292 538 5.57E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 SMART SM00487 176 371 1.7E-21 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Gene3D G3DSA:3.40.50.300 354 581 6.9E-55 T 13-10-2018 VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 SUPERFAMILY SSF52540 148 375 1.37E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 46 133 3.1E-9 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Pfam PF08463 EcoEI R protein C-terminal 667 822 3.4E-28 T 13-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Gene3D G3DSA:3.40.50.300 159 353 5.5E-73 T 13-10-2018 VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Pfam PF04851 Type III restriction enzyme, res subunit 179 336 4.1E-43 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_00198 cbbe33a3d6e669aea7acf47848e758be 825 Gene3D G3DSA:3.90.1570.30 4 156 1.1E-51 T 13-10-2018 VAA_00925 368507c288615df2a0334b678c2730d8 647 Pfam PF00515 Tetratricopeptide repeat 398 430 1.7E-7 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 VAA_00925 368507c288615df2a0334b678c2730d8 647 SUPERFAMILY SSF53300 86 222 2.04E-17 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAA_00925 368507c288615df2a0334b678c2730d8 647 Gene3D G3DSA:1.25.40.10 325 513 1.4E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00925 368507c288615df2a0334b678c2730d8 647 SUPERFAMILY SSF48452 348 445 6.56E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00925 368507c288615df2a0334b678c2730d8 647 Pfam PF13519 von Willebrand factor type A domain 88 194 1.2E-14 T 13-10-2018 IPR002035 von Willebrand factor, type A VAA_00925 368507c288615df2a0334b678c2730d8 647 SMART SM00028 397 430 3.5E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00925 368507c288615df2a0334b678c2730d8 647 Gene3D G3DSA:3.40.50.410 86 284 1.6E-30 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAA_03441 f0d4802201b4267e98f937749f032622 310 Gene3D G3DSA:3.40.50.150 103 279 2.1E-48 T 13-10-2018 VAA_03441 f0d4802201b4267e98f937749f032622 310 Gene3D G3DSA:1.10.8.10 16 102 6.0E-6 T 13-10-2018 VAA_03441 f0d4802201b4267e98f937749f032622 310 Pfam PF05175 Methyltransferase small domain 135 216 4.2E-18 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAA_03441 f0d4802201b4267e98f937749f032622 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 4.6E-98 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VAA_03441 f0d4802201b4267e98f937749f032622 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_03441 f0d4802201b4267e98f937749f032622 310 SUPERFAMILY SSF53335 16 293 2.54E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03441 f0d4802201b4267e98f937749f032622 310 PIRSF PIRSF037167 2 307 2.8E-150 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VAA_03441 f0d4802201b4267e98f937749f032622 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.1E-138 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VAA_03441 f0d4802201b4267e98f937749f032622 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.928 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VAA_03441 f0d4802201b4267e98f937749f032622 310 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 72 267 1.6E-60 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VAA_02675 0ded68739a61273fa7e5925b35e18239 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 108 2.7E-39 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VAA_02675 0ded68739a61273fa7e5925b35e18239 111 Gene3D G3DSA:3.90.470.10 1 111 4.2E-48 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02675 0ded68739a61273fa7e5925b35e18239 111 SUPERFAMILY SSF54843 2 110 9.16E-45 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02675 0ded68739a61273fa7e5925b35e18239 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02675 0ded68739a61273fa7e5925b35e18239 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 5.5E-50 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02675 0ded68739a61273fa7e5925b35e18239 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 111 29.606 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 1.2E-9 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 1.2E-9 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 1.2E-9 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 253 1.9E-95 T 13-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 SUPERFAMILY SSF56534 2 254 1.44E-92 T 13-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 Gene3D G3DSA:1.10.800.10 1 263 1.2E-98 T 13-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 13-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VAA_02977 436ce6d0b86d37d91c9f5dd0a18ea5c1 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 230 1.3E-47 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VAA_02840 84e7a0bff6e87508bf4de60a2b3e31ea 159 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 4 149 2.3E-43 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VAA_02840 84e7a0bff6e87508bf4de60a2b3e31ea 159 Gene3D G3DSA:2.60.40.4150 29 158 5.5E-32 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VAA_02840 84e7a0bff6e87508bf4de60a2b3e31ea 159 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 148 6.2E-38 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 Pfam PF07549 SecD/SecF GG Motif 35 60 5.5E-10 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 Gene3D G3DSA:1.20.1640.10 103 298 1.9E-10 T 13-10-2018 VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.124 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 Pfam PF02355 Protein export membrane protein 111 292 3.3E-71 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 SUPERFAMILY SSF82866 74 293 1.31E-39 T 13-10-2018 VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 4.2E-86 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_00523 4ea7ac5471c31805b3b93dbf2d274209 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 109 282 6.4E-56 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 Pfam PF02378 Phosphotransferase system, EIIC 129 429 6.9E-50 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 21 483 1.2E-196 T 13-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 47 129 1.3E-22 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 Gene3D G3DSA:3.30.1360.60 19 97 9.3E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 SUPERFAMILY SSF55604 25 101 5.75E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 Pfam PF00367 phosphotransferase system, EIIB 27 60 1.1E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 38 55 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_01377 b7bb10b0cb561d3af212de5875869c34 498 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 183 472 2.9E-94 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 SMART SM00387 534 647 5.8E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 Gene3D G3DSA:3.40.50.2300 5 147 3.2E-8 T 13-10-2018 VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 644 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 625 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 589 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 Pfam PF00027 Cyclic nucleotide-binding domain 208 294 9.4E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 Gene3D G3DSA:2.60.120.10 180 324 1.7E-20 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 SUPERFAMILY SSF55874 487 645 7.2E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 346 382 4.4E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 SUPERFAMILY SSF52172 11 142 4.38E-7 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 SUPERFAMILY SSF51206 208 317 3.01E-19 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 Gene3D G3DSA:3.30.565.10 495 647 1.2E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 536 645 8.9E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02211 ecb0a191fe527402b4a9f4f22ba3254c 647 SUPERFAMILY SSF47384 341 391 2.35E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00288 619598f15551a198db97d8c65d0e10c9 199 Gene3D G3DSA:3.40.50.1390 7 137 5.5E-34 T 13-10-2018 VAA_00288 619598f15551a198db97d8c65d0e10c9 199 SMART SM00857 7 149 2.5E-44 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAA_00288 619598f15551a198db97d8c65d0e10c9 199 SUPERFAMILY SSF53041 6 149 1.05E-35 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VAA_00288 619598f15551a198db97d8c65d0e10c9 199 Pfam PF00239 Resolvase, N terminal domain 8 148 1.8E-35 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAA_00288 619598f15551a198db97d8c65d0e10c9 199 ProSitePatterns PS00397 Site-specific recombinases active site. 10 18 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VAA_00288 619598f15551a198db97d8c65d0e10c9 199 ProSitePatterns PS00398 Site-specific recombinases signature 2. 67 79 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VAA_01494 0cc60ae07182bf6f0044b56d99b2c781 64 Gene3D G3DSA:1.10.3210.10 1 58 2.5E-12 T 13-10-2018 VAA_01494 0cc60ae07182bf6f0044b56d99b2c781 64 SUPERFAMILY SSF109604 1 45 3.3E-5 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 ProSitePatterns PS01229 Hypothetical cof family signature 2. 711 733 - T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 ProSitePatterns PS01047 Heavy-metal-associated domain. 128 157 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Gene3D G3DSA:3.40.50.1000 497 763 2.6E-84 T 13-10-2018 IPR023214 HAD superfamily VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 265 813 9.3E-178 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Pfam PF00702 haloacid dehalogenase-like hydrolase 513 724 1.4E-38 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Gene3D G3DSA:3.30.70.100 123 192 1.3E-16 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00941 Cadmium-transporting ATPase signature 300 320 1.8E-6 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00941 Cadmium-transporting ATPase signature 126 135 1.8E-6 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00941 Cadmium-transporting ATPase signature 400 414 1.8E-6 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00941 Cadmium-transporting ATPase signature 137 158 1.8E-6 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 518 524 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Gene3D G3DSA:3.40.1110.10 527 645 2.6E-84 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 288 790 6.2E-83 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 SUPERFAMILY SSF81665 268 799 3.79E-18 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 284 813 1.4E-119 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Pfam PF00403 Heavy-metal-associated domain 128 184 6.5E-12 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 SUPERFAMILY SSF81653 318 415 2.75E-22 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 265 568 6.7E-96 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Pfam PF00122 E1-E2 ATPase 316 496 6.5E-51 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 SUPERFAMILY SSF56784 515 811 2.8E-51 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 Gene3D G3DSA:2.70.150.20 315 420 1.2E-32 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 SUPERFAMILY SSF55008 125 193 3.27E-15 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 365 379 5.2E-28 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 649 5.2E-28 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 530 5.2E-28 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 734 746 5.2E-28 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 670 5.2E-28 T 13-10-2018 VAA_02375 5a2420bb052f2e4bc85757302cb0338e 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 730 5.2E-28 T 13-10-2018 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 Pfam PF01817 Chorismate mutase type II 9 87 6.7E-21 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 Gene3D G3DSA:1.20.59.10 1 80 2.4E-17 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 PIRSF PIRSF001499 1 374 2.5E-178 T 13-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 Pfam PF02153 Prephenate dehydrogenase 130 343 9.4E-28 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 SUPERFAMILY SSF51735 91 237 2.01E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00425 e1d172cd77cddaef119679d13608c95c 375 SUPERFAMILY SSF48179 241 366 1.81E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 SUPERFAMILY SSF48600 3 87 1.04E-23 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 SMART SM00830 9 89 8.3E-29 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 Gene3D G3DSA:1.10.3660.10 248 373 1.2E-47 T 13-10-2018 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 8.1E-41 T 13-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VAA_00425 e1d172cd77cddaef119679d13608c95c 375 Gene3D G3DSA:3.40.50.720 81 247 4.9E-44 T 13-10-2018 VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 Gene3D G3DSA:1.10.357.10 12 203 1.7E-64 T 13-10-2018 VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 1.5E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 74 201 1.3E-7 T 13-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00590 07a1c1b4f15653af957299116c4eaa15 203 SUPERFAMILY SSF46689 17 94 1.5E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03290 3d3697523cb0087773f92d61e9c55014 139 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 40 1.9E-12 T 13-10-2018 VAA_03290 3d3697523cb0087773f92d61e9c55014 139 Gene3D G3DSA:3.30.70.920 47 129 7.2E-18 T 13-10-2018 VAA_03290 3d3697523cb0087773f92d61e9c55014 139 Pfam PF01037 Lrp/AsnC ligand binding domain 60 132 2.1E-15 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAA_03290 3d3697523cb0087773f92d61e9c55014 139 SUPERFAMILY SSF46785 1 51 4.01E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03290 3d3697523cb0087773f92d61e9c55014 139 SMART SM00344 1 102 1.5E-22 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAA_03290 3d3697523cb0087773f92d61e9c55014 139 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 20 3.5E-8 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_03290 3d3697523cb0087773f92d61e9c55014 139 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 39 3.5E-8 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_03290 3d3697523cb0087773f92d61e9c55014 139 Gene3D G3DSA:1.10.10.10 1 46 2.8E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03290 3d3697523cb0087773f92d61e9c55014 139 SUPERFAMILY SSF54909 55 138 3.62E-15 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_01356 47a1b34101a2f2ed45b58761991425e0 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.9E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01356 47a1b34101a2f2ed45b58761991425e0 300 SUPERFAMILY SSF53850 88 293 1.66E-51 T 13-10-2018 VAA_01356 47a1b34101a2f2ed45b58761991425e0 300 Gene3D G3DSA:1.10.10.10 3 89 1.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01356 47a1b34101a2f2ed45b58761991425e0 300 Gene3D G3DSA:3.40.190.290 90 291 5.9E-65 T 13-10-2018 VAA_01356 47a1b34101a2f2ed45b58761991425e0 300 SUPERFAMILY SSF46785 4 110 1.21E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01356 47a1b34101a2f2ed45b58761991425e0 300 Pfam PF03466 LysR substrate binding domain 87 289 1.6E-49 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00308 72b2f0abbb582e05c7e9a7f8ed26a986 303 SMART SM00482 83 259 6.8E-7 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00308 72b2f0abbb582e05c7e9a7f8ed26a986 303 Pfam PF00476 DNA polymerase family A 84 291 2.3E-18 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00308 72b2f0abbb582e05c7e9a7f8ed26a986 303 Gene3D G3DSA:1.10.150.20 101 227 1.9E-22 T 13-10-2018 VAA_00308 72b2f0abbb582e05c7e9a7f8ed26a986 303 Gene3D G3DSA:3.30.70.370 79 276 1.9E-22 T 13-10-2018 VAA_00308 72b2f0abbb582e05c7e9a7f8ed26a986 303 SUPERFAMILY SSF56672 33 287 1.89E-28 T 13-10-2018 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 534 9.3E-243 T 13-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Pfam PF05199 GMC oxidoreductase 388 526 6.0E-41 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Gene3D G3DSA:4.10.450.10 38 198 4.7E-176 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 SUPERFAMILY SSF54373 292 474 8.14E-60 T 13-10-2018 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 PIRSF PIRSF000137 2 540 8.5E-146 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 SUPERFAMILY SSF51905 3 533 7.22E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Gene3D G3DSA:3.50.50.60 5 530 4.7E-176 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Gene3D G3DSA:1.10.1220.110 97 150 4.7E-176 T 13-10-2018 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Gene3D G3DSA:3.30.410.40 151 471 4.7E-176 T 13-10-2018 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 60.428 T 13-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VAA_01521 c3d7076fa8aee5edf4b3befabf764f25 566 Pfam PF00732 GMC oxidoreductase 5 297 3.0E-90 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Gene3D G3DSA:2.40.160.50 426 810 8.3E-119 T 13-10-2018 VAA_03569 aaead304362201593a4e9f6916115eb8 810 PIRSF PIRSF006076 1 810 1.3E-243 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Gene3D G3DSA:3.10.20.310 92 174 1.0E-16 T 13-10-2018 VAA_03569 aaead304362201593a4e9f6916115eb8 810 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 810 2.7E-276 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Pfam PF01103 Surface antigen 448 810 6.4E-87 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Pfam PF07244 Surface antigen variable number repeat 347 420 7.7E-16 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Pfam PF07244 Surface antigen variable number repeat 266 344 3.8E-9 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Pfam PF07244 Surface antigen variable number repeat 176 263 1.3E-15 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Pfam PF07244 Surface antigen variable number repeat 92 172 1.4E-10 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Gene3D G3DSA:3.10.20.310 347 425 5.1E-25 T 13-10-2018 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Gene3D G3DSA:3.10.20.310 264 346 9.1E-13 T 13-10-2018 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Gene3D G3DSA:3.10.20.310 175 263 1.2E-23 T 13-10-2018 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 810 25.554 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VAA_03569 aaead304362201593a4e9f6916115eb8 810 Gene3D G3DSA:3.10.20.310 17 91 1.1E-19 T 13-10-2018 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 SUPERFAMILY SSF49384 60 232 8.79E-64 T 13-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 533 551 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 466 483 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 780 797 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 346 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 360 377 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 762 778 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 389 410 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 PRINTS PR00738 Glycosyl hydrolase family 20 signature 560 573 6.6E-47 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 245 363 8.4E-14 T 13-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 SUPERFAMILY SSF81296 814 916 1.08E-36 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 366 798 1.3E-105 T 13-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 SUPERFAMILY SSF51445 366 806 1.39E-138 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 ProSitePatterns PS00018 EF-hand calcium-binding domain. 745 757 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Pfam PF03173 Putative carbohydrate binding domain 69 227 1.9E-61 T 13-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 SUPERFAMILY SSF55545 241 365 6.67E-24 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 SMART SM01081 68 229 1.2E-88 T 13-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Gene3D G3DSA:3.20.20.80 364 851 2.4E-161 T 13-10-2018 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 838 913 1.1E-27 T 13-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Gene3D G3DSA:2.60.40.290 59 201 1.3E-54 T 13-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Gene3D G3DSA:2.60.40.10 852 916 1.1E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03539 f98bcb23ee88a1bc99e7798343bdb746 917 Gene3D G3DSA:3.30.379.10 239 363 2.0E-24 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 SUPERFAMILY SSF52242 745 896 1.7E-45 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Gene3D G3DSA:3.20.20.20 341 643 5.3E-130 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Pfam PF00809 Pterin binding enzyme 361 599 3.8E-59 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Gene3D G3DSA:1.10.1240.10 650 738 1.5E-41 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Gene3D G3DSA:3.40.50.280 745 896 3.1E-56 T 13-10-2018 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 SUPERFAMILY SSF56507 903 1225 5.1E-131 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Gene3D G3DSA:3.20.20.330 2 339 2.7E-126 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Pfam PF02607 B12 binding domain 660 734 1.1E-26 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Pfam PF02310 B12 binding domain 749 842 8.7E-18 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 SUPERFAMILY SSF47644 654 738 8.37E-30 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 SMART SM01018 658 741 2.1E-45 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 SUPERFAMILY SSF51717 357 631 2.35E-88 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 SUPERFAMILY SSF82282 8 400 8.5E-117 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Gene3D G3DSA:3.10.196.10 909 1224 1.8E-146 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 PIRSF PIRSF000381 3 1197 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 2.0E-124 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Pfam PF02574 Homocysteine S-methyltransferase 18 326 5.6E-80 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VAA_01748 fa0b56d6e344c2fe285138c0dfd517a5 1225 Gene3D G3DSA:1.10.288.10 938 1094 1.8E-146 T 13-10-2018 VAA_03338 2590eaae4696841572350c64f24277ce 214 Pfam PF02223 Thymidylate kinase 8 195 1.1E-52 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VAA_03338 2590eaae4696841572350c64f24277ce 214 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAA_03338 2590eaae4696841572350c64f24277ce 214 Gene3D G3DSA:3.40.50.300 3 210 1.2E-60 T 13-10-2018 VAA_03338 2590eaae4696841572350c64f24277ce 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 195 1.3E-58 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAA_03338 2590eaae4696841572350c64f24277ce 214 SUPERFAMILY SSF52540 1 210 5.57E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03338 2590eaae4696841572350c64f24277ce 214 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 26.853 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Pfam PF07196 Flagellin hook IN motif 199 254 3.2E-12 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 PRINTS PR00207 Flagellin signature 82 101 5.6E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 PRINTS PR00207 Flagellin signature 43 60 5.6E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 PRINTS PR00207 Flagellin signature 117 140 5.6E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Pfam PF00700 Bacterial flagellin C-terminal helical region 297 381 5.7E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Gene3D G3DSA:1.20.1330.10 195 333 1.3E-16 T 13-10-2018 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Gene3D G3DSA:1.20.1330.10 51 181 7.0E-73 T 13-10-2018 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Gene3D G3DSA:1.10.8.410 334 381 1.3E-20 T 13-10-2018 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 147 3.4E-43 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 SUPERFAMILY SSF64518 7 381 7.45E-99 T 13-10-2018 VAA_03467 9c42d404ddd91b78f7460dd1a4e9f2b7 382 Gene3D G3DSA:1.20.58.1830 11 39 7.0E-73 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 SUPERFAMILY SSF69349 437 616 1.33E-25 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 513 5.0E-135 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 Pfam PF05954 Phage late control gene D protein (GPD) 34 330 2.3E-52 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 Gene3D G3DSA:2.40.50.230 352 451 4.9E-39 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 Gene3D G3DSA:2.30.110.50 26 331 6.0E-56 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 SUPERFAMILY SSF69255 359 447 8.37E-32 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 SUPERFAMILY SSF69279 16 189 1.36E-34 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 Gene3D G3DSA:3.30.1920.30 225 287 6.0E-56 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 SUPERFAMILY SSF69279 208 359 4.25E-21 T 13-10-2018 VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 27 498 2.6E-91 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAA_03042 4a7eb25213d0e157faf80c45cc8c6ece 665 Gene3D G3DSA:3.55.50.10 101 193 6.0E-56 T 13-10-2018 VAA_00601 58abddea92c731999228e8a2d7009c95 298 SUPERFAMILY SSF52172 2 120 4.7E-32 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00601 58abddea92c731999228e8a2d7009c95 298 SMART SM00448 1 115 2.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00601 58abddea92c731999228e8a2d7009c95 298 Gene3D G3DSA:3.40.50.12740 1 240 3.6E-36 T 13-10-2018 VAA_00601 58abddea92c731999228e8a2d7009c95 298 Pfam PF00072 Response regulator receiver domain 3 115 1.0E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 408 8.3E-15 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 SUPERFAMILY SSF52402 18 233 1.01E-58 T 13-10-2018 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 Gene3D G3DSA:3.40.50.620 13 233 2.4E-66 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 Pfam PF11734 TilS substrate C-terminal domain 365 434 5.2E-21 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 SUPERFAMILY SSF56037 322 434 2.62E-26 T 13-10-2018 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 203 1.5E-52 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 Pfam PF09179 TilS substrate binding domain 248 315 7.7E-19 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 Gene3D G3DSA:1.20.59.20 234 319 2.3E-26 T 13-10-2018 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 SUPERFAMILY SSF82829 234 318 1.29E-23 T 13-10-2018 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 Pfam PF01171 PP-loop family 22 199 1.2E-56 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 307 22.532 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAA_03559 e75b71d30bce28601b3d9f7f66c84922 436 SMART SM00977 365 434 2.8E-22 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Gene3D G3DSA:3.40.50.720 451 797 9.7E-104 T 13-10-2018 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 PIRSF PIRSF000727 5 803 2.7E-285 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Pfam PF00696 Amino acid kinase family 6 277 1.6E-43 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 SUPERFAMILY SSF53633 6 291 6.02E-60 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Gene3D G3DSA:3.40.1160.10 8 290 1.1E-74 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Pfam PF00742 Homoserine dehydrogenase 601 796 6.3E-43 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 SUPERFAMILY SSF51735 448 623 3.94E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Gene3D G3DSA:1.20.120.1320 44 137 1.1E-74 T 13-10-2018 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 1.1E-15 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 5.7E-63 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 Gene3D G3DSA:3.30.360.10 612 782 9.7E-104 T 13-10-2018 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 SUPERFAMILY SSF55347 601 784 3.07E-45 T 13-10-2018 VAA_02581 f730d03029ee6e2da3e47a28712ffc4f 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 PRINTS PR00084 Mannitol dehydrogenase signature 9 19 1.0E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 PRINTS PR00084 Mannitol dehydrogenase signature 176 191 1.0E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 PRINTS PR00084 Mannitol dehydrogenase signature 120 133 1.0E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 PRINTS PR00084 Mannitol dehydrogenase signature 156 169 1.0E-17 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 8 129 6.1E-24 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 156 380 3.4E-59 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 SUPERFAMILY SSF51735 7 206 8.79E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 156 168 - T 13-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 SUPERFAMILY SSF48179 210 387 2.55E-46 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 7 384 41.237 T 13-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 Gene3D G3DSA:3.40.50.720 7 211 3.1E-78 T 13-10-2018 VAA_02790 42f5e0494eebdaecbe0b0d55b37e4121 387 Gene3D G3DSA:1.10.1040.10 213 387 1.5E-66 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 SUPERFAMILY SSF100950 236 502 9.77E-57 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 PIRSF PIRSF009451 6 504 1.3E-247 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 35 504 5.0E-230 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 Gene3D G3DSA:3.40.1080.10 3 233 8.4E-94 T 13-10-2018 VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 SUPERFAMILY SSF100950 5 233 1.81E-71 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 Gene3D G3DSA:3.40.1080.10 235 504 2.1E-122 T 13-10-2018 VAA_02027 0982a074fd5908ced4f53790b0923b2f 505 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 38 502 1.6E-241 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VAA_03017 99cf77991d3e10aa1b7a6ecefe9fe8f9 158 Gene3D G3DSA:1.10.10.10 5 116 1.6E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03017 99cf77991d3e10aa1b7a6ecefe9fe8f9 158 SMART SM00862 20 93 3.8E-12 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03017 99cf77991d3e10aa1b7a6ecefe9fe8f9 158 SUPERFAMILY SSF46894 17 94 1.47E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03017 99cf77991d3e10aa1b7a6ecefe9fe8f9 158 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 93 4.0E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02251 7b0cbd433f17979947c94835defac1e4 396 PIRSF PIRSF001413 1 395 6.5E-167 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02251 7b0cbd433f17979947c94835defac1e4 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 389 6.0E-195 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02251 7b0cbd433f17979947c94835defac1e4 396 Gene3D G3DSA:3.40.50.1100 53 383 7.6E-182 T 13-10-2018 VAA_02251 7b0cbd433f17979947c94835defac1e4 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.733 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02251 7b0cbd433f17979947c94835defac1e4 396 SUPERFAMILY SSF53686 5 388 1.57E-140 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAA_02251 7b0cbd433f17979947c94835defac1e4 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02251 7b0cbd433f17979947c94835defac1e4 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 7.8E-49 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAA_02251 7b0cbd433f17979947c94835defac1e4 396 Gene3D G3DSA:3.40.50.1100 9 204 7.6E-182 T 13-10-2018 VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 SMART SM00490 259 340 3.6E-34 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 SUPERFAMILY SSF52540 74 361 9.08E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Gene3D G3DSA:3.40.50.300 215 433 1.4E-52 T 13-10-2018 VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.9E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Gene3D G3DSA:3.30.70.330 493 562 1.7E-10 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 564 41.963 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Pfam PF00270 DEAD/DEAH box helicase 30 196 1.7E-49 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Gene3D G3DSA:3.40.50.300 6 212 3.0E-73 T 13-10-2018 VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 Pfam PF03880 DbpA RNA binding domain 492 559 7.6E-17 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VAA_01067 9de4f0e22433f9dbc8204fce22c94424 672 SMART SM00487 25 223 1.0E-58 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 SMART SM00448 565 679 1.5E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 Gene3D G3DSA:3.30.565.10 267 416 1.4E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 Gene3D G3DSA:1.10.287.130 168 259 1.7E-5 T 13-10-2018 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 SUPERFAMILY SSF55874 251 411 2.1E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 Gene3D G3DSA:3.40.50.2300 558 683 4.6E-35 T 13-10-2018 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 SUPERFAMILY SSF47384 171 212 2.55E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 SMART SM00387 305 413 1.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 5.5E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 5.5E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 5.5E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 411 3.4E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 Pfam PF00072 Response regulator receiver domain 567 679 4.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01011 a58256e60c80ecf44d24e70e4e3e5ddb 683 SUPERFAMILY SSF52172 565 683 7.83E-34 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00935 20199201ed42b910672778e8b38bc73c 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.2E-27 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VAA_00935 20199201ed42b910672778e8b38bc73c 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VAA_00935 20199201ed42b910672778e8b38bc73c 343 SMART SM00829 14 340 1.2E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAA_00935 20199201ed42b910672778e8b38bc73c 343 SUPERFAMILY SSF50129 3 175 2.74E-53 T 13-10-2018 IPR011032 GroES-like superfamily VAA_00935 20199201ed42b910672778e8b38bc73c 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 1.0E-30 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAA_00935 20199201ed42b910672778e8b38bc73c 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.43 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VAA_00935 20199201ed42b910672778e8b38bc73c 343 Gene3D G3DSA:3.90.180.10 22 330 6.3E-117 T 13-10-2018 VAA_00935 20199201ed42b910672778e8b38bc73c 343 Gene3D G3DSA:3.40.50.720 155 288 6.3E-117 T 13-10-2018 VAA_00935 20199201ed42b910672778e8b38bc73c 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 1.4E-179 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VAA_00935 20199201ed42b910672778e8b38bc73c 343 SUPERFAMILY SSF51735 143 307 6.66E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03346 eca58b366cf189f23fba4d458802f066 341 PIRSF PIRSF002465 2 339 8.3E-120 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VAA_03346 eca58b366cf189f23fba4d458802f066 341 Gene3D G3DSA:3.40.718.10 3 340 4.3E-115 T 13-10-2018 VAA_03346 eca58b366cf189f23fba4d458802f066 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 5.5E-104 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VAA_03346 eca58b366cf189f23fba4d458802f066 341 Pfam PF02504 Fatty acid synthesis protein 5 327 7.7E-99 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VAA_03346 eca58b366cf189f23fba4d458802f066 341 SUPERFAMILY SSF53659 4 336 6.58E-99 T 13-10-2018 VAA_03346 eca58b366cf189f23fba4d458802f066 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 133.167 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VAA_02520 4bc54c554c5aa27245a3d8787ba160df 372 Pfam PF13477 Glycosyl transferase 4-like 3 147 1.9E-17 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VAA_02520 4bc54c554c5aa27245a3d8787ba160df 372 SUPERFAMILY SSF53756 20 370 4.13E-51 T 13-10-2018 VAA_02520 4bc54c554c5aa27245a3d8787ba160df 372 Pfam PF00534 Glycosyl transferases group 1 186 342 6.2E-20 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VAA_02520 4bc54c554c5aa27245a3d8787ba160df 372 Gene3D G3DSA:3.40.50.2000 24 364 6.2E-36 T 13-10-2018 VAA_02520 4bc54c554c5aa27245a3d8787ba160df 372 Gene3D G3DSA:3.40.50.2000 173 353 6.2E-36 T 13-10-2018 VAA_01167 fbb7a2d7c5b0392c905704351496d74e 240 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_01167 fbb7a2d7c5b0392c905704351496d74e 240 Pfam PF00849 RNA pseudouridylate synthase 10 170 2.2E-31 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_01167 fbb7a2d7c5b0392c905704351496d74e 240 SUPERFAMILY SSF55120 2 237 1.47E-63 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_01167 fbb7a2d7c5b0392c905704351496d74e 240 Gene3D G3DSA:3.30.2350.10 1 223 2.0E-60 T 13-10-2018 VAA_01934 4c880f8eccbcaba3fbe5449e5b26cbc7 386 SUPERFAMILY SSF58104 58 266 1.03E-43 T 13-10-2018 VAA_01934 4c880f8eccbcaba3fbe5449e5b26cbc7 386 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 130 266 1.2E-30 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01934 4c880f8eccbcaba3fbe5449e5b26cbc7 386 SMART SM00283 61 298 2.3E-15 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01934 4c880f8eccbcaba3fbe5449e5b26cbc7 386 Gene3D G3DSA:1.10.287.950 26 273 4.0E-42 T 13-10-2018 VAA_01934 4c880f8eccbcaba3fbe5449e5b26cbc7 386 Pfam PF13682 Chemoreceptor zinc-binding domain 281 345 1.4E-13 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain VAA_01903 f4afb74d4d33704e294042633c113562 176 SMART SM00260 27 166 2.3E-22 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01903 f4afb74d4d33704e294042633c113562 176 Gene3D G3DSA:2.40.50.180 50 161 3.7E-30 T 13-10-2018 VAA_01903 f4afb74d4d33704e294042633c113562 176 Pfam PF01584 CheW-like domain 32 168 1.2E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01903 f4afb74d4d33704e294042633c113562 176 Gene3D G3DSA:2.30.30.40 34 160 3.7E-30 T 13-10-2018 VAA_01903 f4afb74d4d33704e294042633c113562 176 SUPERFAMILY SSF50341 30 169 2.88E-31 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01331 6cc6b12c29109a9639003720cfe8761b 203 Pfam PF00588 SpoU rRNA Methylase family 34 167 1.3E-17 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAA_01331 6cc6b12c29109a9639003720cfe8761b 203 SUPERFAMILY SSF75217 15 171 2.58E-25 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_01331 6cc6b12c29109a9639003720cfe8761b 203 Gene3D G3DSA:3.40.1280.10 34 179 2.3E-16 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_03608 72b575c4b9ab4cc3f66ab836e993cd1a 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.1E-20 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 Gene3D G3DSA:3.40.50.720 119 239 4.9E-86 T 13-10-2018 VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 SUPERFAMILY SSF53223 6 105 2.07E-32 T 13-10-2018 VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 5.0E-13 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.426 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 SUPERFAMILY SSF51735 106 273 1.42E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.9E-25 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 8.9E-88 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VAA_01758 2751dd6f56f384ea1c9f66efc7022c89 276 Gene3D G3DSA:3.40.50.10860 8 258 4.9E-86 T 13-10-2018 VAA_02281 c5602bf0d080236394df16670db1550c 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 8.9E-152 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VAA_02281 c5602bf0d080236394df16670db1550c 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 1.0E-81 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAA_02281 c5602bf0d080236394df16670db1550c 374 Gene3D G3DSA:3.40.50.720 3 353 1.3E-134 T 13-10-2018 VAA_02281 c5602bf0d080236394df16670db1550c 374 PIRSF PIRSF000183 1 371 3.9E-155 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VAA_02281 c5602bf0d080236394df16670db1550c 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.2E-46 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAA_02281 c5602bf0d080236394df16670db1550c 374 SUPERFAMILY SSF51735 137 303 5.25E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02281 c5602bf0d080236394df16670db1550c 374 SUPERFAMILY SSF52283 1 360 3.66E-67 T 13-10-2018 VAA_02281 c5602bf0d080236394df16670db1550c 374 SMART SM01003 4 137 7.9E-78 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAA_02281 c5602bf0d080236394df16670db1550c 374 Gene3D G3DSA:3.40.50.720 130 305 1.3E-134 T 13-10-2018 VAA_02281 c5602bf0d080236394df16670db1550c 374 SMART SM01002 149 297 1.1E-84 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAA_01215 0e002ce5f1103f4f4d23c34094a3ad93 58 SUPERFAMILY SSF46955 5 54 7.69E-8 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_01215 0e002ce5f1103f4f4d23c34094a3ad93 58 Pfam PF12728 Helix-turn-helix domain 6 54 3.5E-19 T 13-10-2018 VAA_01215 0e002ce5f1103f4f4d23c34094a3ad93 58 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 51 2.3E-14 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 VAA_01215 0e002ce5f1103f4f4d23c34094a3ad93 58 Gene3D G3DSA:1.10.1660.10 3 54 4.3E-8 T 13-10-2018 VAA_02370 c3bc8211ccee1e1018ec7ef527831246 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.213 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VAA_02370 c3bc8211ccee1e1018ec7ef527831246 358 SUPERFAMILY SSF52540 96 342 2.55E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02370 c3bc8211ccee1e1018ec7ef527831246 358 Gene3D G3DSA:3.40.50.300 81 336 3.4E-84 T 13-10-2018 VAA_02370 c3bc8211ccee1e1018ec7ef527831246 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 6.6E-100 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VAA_02370 c3bc8211ccee1e1018ec7ef527831246 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 267 22.658 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 137 264 2.6E-46 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 265 7.0E-84 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 Gene3D G3DSA:3.30.1400.10 133 273 1.1E-49 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 138 269 4.0E-67 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 SMART SM00771 135 265 2.4E-71 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VAA_01080 7c12384a90648440adf9963b4963f4c3 274 SUPERFAMILY SSF64383 137 270 1.57E-48 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 12 531 2.7E-185 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Gene3D G3DSA:1.10.530.40 835 997 1.4E-45 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Pfam PF05954 Phage late control gene D protein (GPD) 46 339 3.3E-77 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Gene3D G3DSA:2.40.50.230 367 466 9.1E-40 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 836 985 1.0E-61 T 13-10-2018 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 SUPERFAMILY SSF69349 452 633 1.1E-45 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Gene3D G3DSA:2.30.110.50 18 341 1.5E-85 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 SUPERFAMILY SSF69255 374 461 3.66E-32 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Gene3D G3DSA:1.10.101.10 738 827 9.1E-15 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 SUPERFAMILY SSF69279 198 375 1.14E-43 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 SUPERFAMILY SSF47090 747 821 2.88E-10 T 13-10-2018 IPR036365 PGBD-like superfamily VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 SUPERFAMILY SSF53955 837 1000 1.38E-6 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Gene3D G3DSA:3.55.50.10 109 200 1.5E-85 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 47 513 2.1E-131 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Gene3D G3DSA:3.30.1920.30 233 296 1.5E-85 T 13-10-2018 VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 Pfam PF01471 Putative peptidoglycan binding domain 754 793 9.9E-7 T 13-10-2018 IPR002477 Peptidoglycan binding-like VAA_01944 adc0b6b515c153630b2de0d9d364102a 1000 SUPERFAMILY SSF69279 11 196 7.94E-50 T 13-10-2018 VAA_02061 d576f547d252a7e6ad59151597638620 396 Pfam PF04303 PrpF protein 14 395 3.0E-173 T 13-10-2018 IPR007400 PrpF protein VAA_02061 d576f547d252a7e6ad59151597638620 396 SUPERFAMILY SSF54506 192 395 1.8E-73 T 13-10-2018 VAA_02061 d576f547d252a7e6ad59151597638620 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 13 394 1.0E-219 T 13-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 VAA_02061 d576f547d252a7e6ad59151597638620 396 SUPERFAMILY SSF54506 12 189 4.32E-70 T 13-10-2018 VAA_02061 d576f547d252a7e6ad59151597638620 396 Gene3D G3DSA:3.10.310.10 18 392 1.1E-147 T 13-10-2018 VAA_02061 d576f547d252a7e6ad59151597638620 396 Gene3D G3DSA:3.10.310.10 188 378 1.1E-147 T 13-10-2018 VAA_03027 2da20796f5038243d120a46487587473 231 Gene3D G3DSA:3.40.190.10 109 204 2.3E-14 T 13-10-2018 VAA_03027 2da20796f5038243d120a46487587473 231 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 229 9.8E-9 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03027 2da20796f5038243d120a46487587473 231 Gene3D G3DSA:3.40.190.10 33 230 2.3E-14 T 13-10-2018 VAA_03027 2da20796f5038243d120a46487587473 231 SUPERFAMILY SSF53850 25 229 1.74E-23 T 13-10-2018 VAA_3196 09d426bf6fb54b4b6c6c3192b252b43f 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 6.7E-111 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_3196 09d426bf6fb54b4b6c6c3192b252b43f 402 Gene3D G3DSA:3.40.50.720 2 401 1.1E-180 T 13-10-2018 VAA_3196 09d426bf6fb54b4b6c6c3192b252b43f 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 4 81 3.1E-37 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_3196 09d426bf6fb54b4b6c6c3192b252b43f 402 Pfam PF07055 Enoyl reductase FAD binding domain 328 391 7.1E-32 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_3196 09d426bf6fb54b4b6c6c3192b252b43f 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 3 397 57.157 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 PIRSF PIRSF002401 1 374 7.6E-135 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type VAA_01680 97940531aabdeb56decc4769c0a416b5 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 9.9E-141 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 Gene3D G3DSA:3.40.50.300 159 335 9.6E-50 T 13-10-2018 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 Pfam PF01018 GTP1/OBG 4 156 2.2E-55 T 13-10-2018 IPR006169 GTP1/OBG domain VAA_01680 97940531aabdeb56decc4769c0a416b5 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 7.4E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.324 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 SUPERFAMILY SSF82051 2 157 1.44E-54 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily VAA_01680 97940531aabdeb56decc4769c0a416b5 390 SUPERFAMILY SSF52540 151 344 2.12E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01680 97940531aabdeb56decc4769c0a416b5 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_01680 97940531aabdeb56decc4769c0a416b5 390 Gene3D G3DSA:2.70.210.12 1 158 3.1E-58 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily VAA_01451 1c40fa9064354260cac846fc84a69115 480 SUPERFAMILY SSF51445 6 478 2.94E-160 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01451 1c40fa9064354260cac846fc84a69115 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 2.6E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAA_01451 1c40fa9064354260cac846fc84a69115 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 2.6E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAA_01451 1c40fa9064354260cac846fc84a69115 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 2.6E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAA_01451 1c40fa9064354260cac846fc84a69115 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 2.6E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAA_01451 1c40fa9064354260cac846fc84a69115 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 308 322 2.6E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAA_01451 1c40fa9064354260cac846fc84a69115 480 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site VAA_01451 1c40fa9064354260cac846fc84a69115 480 Pfam PF00232 Glycosyl hydrolase family 1 6 477 2.3E-131 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VAA_01451 1c40fa9064354260cac846fc84a69115 480 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VAA_01451 1c40fa9064354260cac846fc84a69115 480 Gene3D G3DSA:3.20.20.80 2 480 1.3E-163 T 13-10-2018 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 SUPERFAMILY SSF75620 1 328 4.45E-136 T 13-10-2018 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 Pfam PF00472 RF-1 domain 193 301 2.3E-40 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 209 225 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 Gene3D G3DSA:1.20.58.410 1 80 3.6E-26 T 13-10-2018 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 327 4.2E-160 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 SMART SM00937 49 159 2.9E-54 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 Gene3D G3DSA:3.30.70.1660 94 322 2.5E-95 T 13-10-2018 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 Pfam PF03462 PCRF domain 2 183 1.1E-55 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 Gene3D G3DSA:3.30.160.20 190 285 2.5E-95 T 13-10-2018 VAA_00378 0c4bbf63db56d27dda937a8326b73dfe 329 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 329 35.999 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VAA_02800 5c83a0094db151fc09577db579f19e8a 160 SUPERFAMILY SSF46785 10 148 6.56E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02800 5c83a0094db151fc09577db579f19e8a 160 SMART SM00347 30 131 6.5E-22 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.5E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.5E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.5E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.5E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 Pfam PF01047 MarR family 37 95 1.2E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_02800 5c83a0094db151fc09577db579f19e8a 160 Gene3D G3DSA:1.10.10.10 10 149 1.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 7.7E-31 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.1E-132 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Gene3D G3DSA:3.30.300.150 566 691 3.9E-39 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Gene3D G3DSA:1.20.272.10 242 361 3.6E-40 T 13-10-2018 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 SUPERFAMILY SSF52540 32 223 1.72E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 SMART SM00382 37 179 1.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 568 706 1.8E-49 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Gene3D G3DSA:3.40.50.300 13 177 9.6E-102 T 13-10-2018 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 490 566 3.5E-22 T 13-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 SUPERFAMILY SSF48019 243 362 1.62E-32 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Gene3D G3DSA:1.10.8.60 8 238 9.6E-102 T 13-10-2018 VAA_02353 aff01c32e0921eff5bf0152498cc9f7f 709 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.7E-44 T 13-10-2018 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 SUPERFAMILY SSF52540 21 254 3.01E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Gene3D G3DSA:3.30.70.3380 390 500 1.5E-39 T 13-10-2018 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 64 79 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_03777 11335d738d9c78b2d759805e2165bce5 619 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 28 198 1.0E-16 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Hamap MF_00071 Elongation factor 4 [lepA]. 1 619 300.007 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Gene3D G3DSA:3.30.70.870 308 389 8.5E-36 T 13-10-2018 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Gene3D G3DSA:3.40.50.300 22 207 1.5E-70 T 13-10-2018 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Pfam PF03144 Elongation factor Tu domain 2 227 297 6.6E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 SUPERFAMILY SSF54980 421 515 1.53E-23 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_03777 11335d738d9c78b2d759805e2165bce5 619 TIGRFAM TIGR01393 lepA: elongation factor 4 24 616 6.3E-302 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 SUPERFAMILY SSF54980 314 392 1.69E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Pfam PF06421 GTP-binding protein LepA C-terminus 509 614 2.3E-49 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VAA_03777 11335d738d9c78b2d759805e2165bce5 619 PRINTS PR00315 GTP-binding elongation factor signature 28 41 4.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 PRINTS PR00315 GTP-binding elongation factor signature 112 123 4.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 PRINTS PR00315 GTP-binding elongation factor signature 96 106 4.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 PRINTS PR00315 GTP-binding elongation factor signature 71 79 4.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 PRINTS PR00315 GTP-binding elongation factor signature 148 157 4.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Pfam PF00009 Elongation factor Tu GTP binding domain 24 203 4.7E-53 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Pfam PF00679 Elongation factor G C-terminus 421 503 2.4E-18 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Gene3D G3DSA:3.30.70.2570 501 575 5.0E-33 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily VAA_03777 11335d738d9c78b2d759805e2165bce5 619 Gene3D G3DSA:2.40.30.10 208 307 3.8E-34 T 13-10-2018 VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 8 256 3.2E-106 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 SMART SM00849 16 170 1.7E-30 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 Pfam PF00753 Metallo-beta-lactamase superfamily 18 170 4.0E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 PIRSF PIRSF005457 2 256 1.3E-100 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 171 256 2.9E-27 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 Gene3D G3DSA:3.60.15.10 2 256 8.5E-95 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 6 256 44.668 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VAA_03553 eecac87118ab506fcab7e84a9a0b90de 256 SUPERFAMILY SSF56281 6 256 8.26E-68 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01416 157bdfa8c86f3ec367d10e5de13c4068 184 Gene3D G3DSA:2.40.50.180 47 117 2.6E-40 T 13-10-2018 VAA_01416 157bdfa8c86f3ec367d10e5de13c4068 184 SMART SM00260 24 165 4.0E-36 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01416 157bdfa8c86f3ec367d10e5de13c4068 184 SUPERFAMILY SSF50341 27 169 8.76E-36 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01416 157bdfa8c86f3ec367d10e5de13c4068 184 Gene3D G3DSA:2.30.30.40 30 159 2.6E-40 T 13-10-2018 VAA_01416 157bdfa8c86f3ec367d10e5de13c4068 184 Pfam PF01584 CheW-like domain 28 166 1.2E-34 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_02309 691b5159c8ce35530fed6df41bbac04c 458 SUPERFAMILY SSF143548 19 157 2.35E-43 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VAA_02309 691b5159c8ce35530fed6df41bbac04c 458 Gene3D G3DSA:3.30.1330.90 13 159 2.3E-50 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VAA_02309 691b5159c8ce35530fed6df41bbac04c 458 Pfam PF03313 Serine dehydratase alpha chain 184 449 1.0E-94 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VAA_02309 691b5159c8ce35530fed6df41bbac04c 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 6 450 1.1E-196 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VAA_02309 691b5159c8ce35530fed6df41bbac04c 458 Pfam PF03315 Serine dehydratase beta chain 6 155 2.5E-52 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VAA_03487 72fc379dfe72dddcb226ba64d394ceb5 358 Pfam PF01594 AI-2E family transporter 20 344 1.4E-75 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like VAA_01046 6949887bbb963b92e61650f9e2f04ca5 274 Pfam PF11495 Archaeal transcriptional regulator TrmB 116 213 2.3E-10 T 13-10-2018 IPR021586 Transcription regulator TrmB, C-terminal VAA_01046 6949887bbb963b92e61650f9e2f04ca5 274 SUPERFAMILY SSF46785 12 100 1.64E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01046 6949887bbb963b92e61650f9e2f04ca5 274 Gene3D G3DSA:1.10.10.10 9 108 8.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01046 6949887bbb963b92e61650f9e2f04ca5 274 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 17 83 3.8E-14 T 13-10-2018 IPR002831 Transcription regulator TrmB, N-terminal VAA_00835 00b394473657eabc275d4cd589f1a75b 210 PIRSF PIRSF003078 1 209 4.0E-61 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAA_00835 00b394473657eabc275d4cd589f1a75b 210 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 2.0E-62 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAA_00835 00b394473657eabc275d4cd589f1a75b 210 Gene3D G3DSA:3.40.50.150 5 209 1.5E-67 T 13-10-2018 VAA_00835 00b394473657eabc275d4cd589f1a75b 210 SUPERFAMILY SSF53335 12 208 2.05E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00835 00b394473657eabc275d4cd589f1a75b 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 1.9E-58 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAA_00835 00b394473657eabc275d4cd589f1a75b 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.49 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VAA_00538 fab5572ffd46625a4906048e8d16e174 733 SUPERFAMILY SSF69322 64 377 6.02E-8 T 13-10-2018 VAA_00538 fab5572ffd46625a4906048e8d16e174 733 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 451 727 1.7E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00538 fab5572ffd46625a4906048e8d16e174 733 Gene3D G3DSA:1.10.3720.10 495 730 1.8E-21 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00538 fab5572ffd46625a4906048e8d16e174 733 SUPERFAMILY SSF161098 429 665 1.53E-19 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 Gene3D G3DSA:3.40.50.2300 205 376 2.2E-22 T 13-10-2018 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 ProSitePatterns PS00356 LacI-type HTH domain signature. 53 71 - T 13-10-2018 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 Gene3D G3DSA:1.10.260.40 51 111 1.3E-25 T 13-10-2018 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 SMART SM00354 50 123 4.3E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 SUPERFAMILY SSF53822 111 361 1.43E-37 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 Gene3D G3DSA:3.40.50.2300 112 204 3.0E-19 T 13-10-2018 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 SUPERFAMILY SSF47413 51 108 3.1E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 52 375 8.8E-136 T 13-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 113 303 2.0E-13 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAA_01008 e0d5d7a0f9f82a6bce7639d8613721a1 377 Pfam PF00356 Bacterial regulatory proteins, lacI family 52 100 6.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 PRINTS PR00151 Porphobilinogen deaminase signature 269 286 3.4E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 PRINTS PR00151 Porphobilinogen deaminase signature 115 134 3.4E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 PRINTS PR00151 Porphobilinogen deaminase signature 182 199 3.4E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 PRINTS PR00151 Porphobilinogen deaminase signature 84 104 3.4E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 PRINTS PR00151 Porphobilinogen deaminase signature 163 180 3.4E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 Gene3D G3DSA:3.40.190.10 142 241 5.8E-85 T 13-10-2018 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 Gene3D G3DSA:3.30.160.40 260 345 8.9E-28 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 266 335 5.6E-20 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 44 336 39.979 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 270 286 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 PIRSF PIRSF001438 34 350 2.0E-122 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 SUPERFAMILY SSF54782 259 348 2.09E-27 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 45 336 9.7E-115 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 SUPERFAMILY SSF53850 44 258 2.17E-85 T 13-10-2018 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 Gene3D G3DSA:3.40.190.10 45 249 5.8E-85 T 13-10-2018 VAA_01951 90d13d3638955f5137196aa8909ac76f 350 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 45 252 1.3E-79 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VAA_03220 fb196b520b0b51436dcd143587146115 386 Gene3D G3DSA:3.40.50.10770 1 140 1.4E-59 T 13-10-2018 VAA_03220 fb196b520b0b51436dcd143587146115 386 Gene3D G3DSA:3.40.1350.10 251 376 5.0E-76 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VAA_03220 fb196b520b0b51436dcd143587146115 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 7.6E-165 T 13-10-2018 IPR015093 Protein of unknown function DUF1887 VAA_03220 fb196b520b0b51436dcd143587146115 386 SUPERFAMILY SSF52980 1 382 9.83E-117 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_03220 fb196b520b0b51436dcd143587146115 386 Gene3D G3DSA:1.10.10.680 169 250 5.0E-76 T 13-10-2018 VAA_00410 3fc01724710abfda273b675ecaab2573 321 SUPERFAMILY SSF52374 25 185 2.34E-36 T 13-10-2018 VAA_00410 3fc01724710abfda273b675ecaab2573 321 SUPERFAMILY SSF82114 184 319 1.22E-43 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VAA_00410 3fc01724710abfda273b675ecaab2573 321 Pfam PF01687 Riboflavin kinase 194 316 3.6E-37 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VAA_00410 3fc01724710abfda273b675ecaab2573 321 Gene3D G3DSA:2.40.30.30 198 321 1.2E-38 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VAA_00410 3fc01724710abfda273b675ecaab2573 321 Gene3D G3DSA:3.40.50.620 11 197 6.4E-61 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00410 3fc01724710abfda273b675ecaab2573 321 Pfam PF06574 FAD synthetase 22 177 2.0E-58 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VAA_00410 3fc01724710abfda273b675ecaab2573 321 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 28 64 2.6E-7 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_00410 3fc01724710abfda273b675ecaab2573 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 28 316 8.8E-108 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VAA_00410 3fc01724710abfda273b675ecaab2573 321 PIRSF PIRSF004491 11 321 2.5E-106 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VAA_00410 3fc01724710abfda273b675ecaab2573 321 SMART SM00904 193 317 3.0E-60 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 SUPERFAMILY SSF54373 180 265 3.61E-22 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 Gene3D G3DSA:3.50.50.60 7 337 2.3E-93 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 SUPERFAMILY SSF51905 5 347 2.21E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 3.7E-39 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 325 3.7E-39 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.7E-39 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 3.7E-39 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 3.7E-39 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 3.7E-39 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 Pfam PF01494 FAD binding domain 6 339 2.3E-70 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 Gene3D G3DSA:3.30.9.50 74 263 2.3E-93 T 13-10-2018 VAA_02644 95d9dcf4e2392c601c0c3e819ae3c1a9 478 Gene3D G3DSA:3.40.30.120 375 478 1.5E-8 T 13-10-2018 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 SUPERFAMILY SSF63411 703 916 8.17E-45 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Gene3D G3DSA:3.30.830.10 469 852 2.4E-106 T 13-10-2018 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 SUPERFAMILY SSF63411 232 458 1.05E-71 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 642 5.5E-81 T 13-10-2018 IPR032632 Peptidase M16, middle/third domain VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 SUPERFAMILY SSF63411 4 227 6.46E-61 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 1.4E-23 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Pfam PF05193 Peptidase M16 inactive domain 648 824 2.4E-10 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Gene3D G3DSA:3.30.830.10 618 877 2.4E-106 T 13-10-2018 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Pfam PF00675 Insulinase (Peptidase family M16) 23 158 2.1E-37 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Gene3D G3DSA:3.30.830.10 239 466 8.7E-69 T 13-10-2018 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 SUPERFAMILY SSF63411 469 694 2.2E-57 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_03394 0dd8e985b33ed25a627d2296cf113c8b 925 Gene3D G3DSA:3.30.830.10 1 228 2.0E-88 T 13-10-2018 VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 Gene3D G3DSA:3.30.420.40 91 387 1.8E-108 T 13-10-2018 VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 SUPERFAMILY SSF46785 10 77 1.53E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 Gene3D G3DSA:3.30.420.40 208 377 1.8E-108 T 13-10-2018 VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 SUPERFAMILY SSF53067 86 393 7.21E-56 T 13-10-2018 VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 Pfam PF00480 ROK family 88 390 1.6E-67 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_03327 55a4ecd991c0d5fd56656e145a438d7a 405 Gene3D G3DSA:1.10.10.10 2 80 1.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01584 616f6216d501902f11992f49a3c1543f 435 Gene3D G3DSA:1.10.287.130 150 271 2.0E-23 T 13-10-2018 VAA_01584 616f6216d501902f11992f49a3c1543f 435 SUPERFAMILY SSF55874 271 424 4.39E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01584 616f6216d501902f11992f49a3c1543f 435 SUPERFAMILY SSF47384 169 223 5.1E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01584 616f6216d501902f11992f49a3c1543f 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 3.1E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01584 616f6216d501902f11992f49a3c1543f 435 SMART SM00387 317 426 1.9E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01584 616f6216d501902f11992f49a3c1543f 435 Pfam PF08448 PAS fold 12 131 1.1E-5 T 13-10-2018 IPR013656 PAS fold-4 VAA_01584 616f6216d501902f11992f49a3c1543f 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 245 9.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01584 616f6216d501902f11992f49a3c1543f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 8.6E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01584 616f6216d501902f11992f49a3c1543f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 8.6E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01584 616f6216d501902f11992f49a3c1543f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 8.6E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01584 616f6216d501902f11992f49a3c1543f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 8.6E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01584 616f6216d501902f11992f49a3c1543f 435 Gene3D G3DSA:3.30.450.20 1 136 8.8E-36 T 13-10-2018 VAA_01584 616f6216d501902f11992f49a3c1543f 435 Gene3D G3DSA:3.30.565.10 279 429 5.8E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03114 ade730a150bfa43691d8f9143585146f 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAA_03114 ade730a150bfa43691d8f9143585146f 185 Gene3D G3DSA:1.20.120.1760 2 180 4.8E-18 T 13-10-2018 VAA_03114 ade730a150bfa43691d8f9143585146f 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 3.9E-53 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VAA_03114 ade730a150bfa43691d8f9143585146f 185 PIRSF PIRSF000847 1 183 1.5E-44 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VAA_03114 ade730a150bfa43691d8f9143585146f 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 7.0E-55 T 13-10-2018 IPR017926 Glutamine amidotransferase VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.4E-86 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 SUPERFAMILY SSF52317 1 191 2.57E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.4E-36 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.4E-36 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.4E-36 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.4E-36 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.4E-36 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.4E-36 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 Gene3D G3DSA:3.40.50.880 1 191 7.3E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.4E-6 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 3.4E-6 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.4E-6 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 13-10-2018 VAA_02646 0b6f1b4bd9ffaefe11308ba2029519a7 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 13-10-2018 VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 Gene3D G3DSA:1.10.150.20 45 87 4.2E-5 T 13-10-2018 VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 SUPERFAMILY SSF47781 16 91 6.67E-11 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 SUPERFAMILY SSF102712 133 192 3.66E-5 T 13-10-2018 VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 Pfam PF04002 RadC-like JAB domain 103 222 5.5E-45 T 13-10-2018 IPR025657 RadC-like JAB domain VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.5E-78 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 VAA_02455 bf3a3b8dbcac88ff6b12ab0ca7c10338 224 Gene3D G3DSA:3.40.140.10 101 224 1.2E-43 T 13-10-2018 VAA_03208 283237f9df59ce90d0447750b9b9cee5 256 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 254 3.3E-64 T 13-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SMART SM00532 4 449 4.1E-277 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:2.20.70.80 392 432 2.7E-18 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SMART SM00278 447 466 27.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SMART SM00278 481 500 0.52 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SMART SM00278 545 564 340.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 398 5.3E-35 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SUPERFAMILY SSF50249 319 399 3.26E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SMART SM00292 595 671 1.4E-8 T 13-10-2018 IPR001357 BRCT domain VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Pfam PF14520 Helix-hairpin-helix domain 447 501 3.8E-6 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 319 1.3E-134 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 PIRSF PIRSF001604 1 671 7.2E-255 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Pfam PF12826 Helix-hairpin-helix motif 511 574 1.7E-23 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 668 6.1E-11 T 13-10-2018 IPR001357 BRCT domain VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:1.10.150.20 507 585 1.0E-28 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:3.30.470.90 70 318 8.3E-103 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SUPERFAMILY SSF52113 594 670 4.09E-17 T 13-10-2018 IPR036420 BRCT domain superfamily VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:1.10.150.20 433 506 3.5E-30 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:2.40.50.140 319 391 2.0E-34 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:3.40.50.10190 586 670 1.1E-23 T 13-10-2018 IPR036420 BRCT domain superfamily VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 6.4E-10 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SUPERFAMILY SSF47781 404 584 6.35E-61 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Hamap MF_01588 DNA ligase [ligA]. 3 669 52.982 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 SUPERFAMILY SSF56091 3 317 7.68E-125 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 Gene3D G3DSA:1.10.287.610 2 69 5.3E-28 T 13-10-2018 VAA_01079 b9b38324be84dfbc062c56431413fa0d 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 9.3E-263 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Pfam PF13426 PAS domain 350 450 1.0E-9 T 13-10-2018 IPR000014 PAS domain VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Gene3D G3DSA:3.30.450.20 346 460 6.8E-14 T 13-10-2018 VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 342 458 3.2E-12 T 13-10-2018 IPR000014 PAS domain VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 SUPERFAMILY SSF103190 208 296 1.41E-15 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 SUPERFAMILY SSF103190 38 204 9.42E-32 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Gene3D G3DSA:3.30.70.270 461 618 3.3E-46 T 13-10-2018 VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 613 3.3E-39 T 13-10-2018 IPR000160 GGDEF domain VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Gene3D G3DSA:3.30.450.20 73 203 1.6E-25 T 13-10-2018 VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 SMART SM00267 451 614 2.2E-47 T 13-10-2018 IPR000160 GGDEF domain VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Gene3D G3DSA:3.30.450.20 205 300 1.2E-22 T 13-10-2018 VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 SUPERFAMILY SSF55073 467 614 1.26E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 610 3.5E-37 T 13-10-2018 IPR000160 GGDEF domain VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 SUPERFAMILY SSF55785 350 460 1.5E-14 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00179 fc5a8377f8d888eb4999c5ae324fd801 621 Gene3D G3DSA:1.20.5.170 26 72 1.3E-9 T 13-10-2018 VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 SUPERFAMILY SSF50346 108 182 1.77E-19 T 13-10-2018 IPR011033 PRC-barrel-like superfamily VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 Pfam PF05239 PRC-barrel domain 106 179 4.1E-13 T 13-10-2018 IPR027275 PRC-barrel domain VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.673 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 SUPERFAMILY SSF50447 15 102 1.17E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 Pfam PF01782 RimM N-terminal domain 18 97 3.8E-25 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 8.5E-56 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 Gene3D G3DSA:2.30.30.240 103 184 1.9E-30 T 13-10-2018 VAA_00722 a79616bedf6e1d0bec5f1ddf42974ba4 184 Gene3D G3DSA:2.40.30.60 6 102 1.2E-32 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VAA_02565 9240bfb643c0d68f0e3d918fa1abd23c 490 Pfam PF03606 C4-dicarboxylate anaerobic carrier 29 484 1.3E-137 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 Gene3D G3DSA:1.10.287.950 348 678 4.6E-71 T 13-10-2018 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 7.7E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 7.7E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 7.7E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 SUPERFAMILY SSF58104 369 678 1.44E-72 T 13-10-2018 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 SMART SM00283 416 677 6.6E-73 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 SMART SM00304 349 401 1.8E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03219 74f547c050c334b6d5b78110c87bf743 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 642 4.9E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00317 976e3b720208b02ddbb0a628af5a758e 191 Gene3D G3DSA:3.30.420.10 5 189 5.2E-37 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00317 976e3b720208b02ddbb0a628af5a758e 191 SMART SM00479 11 190 6.4E-22 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_00317 976e3b720208b02ddbb0a628af5a758e 191 SUPERFAMILY SSF53098 13 187 1.14E-32 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00317 976e3b720208b02ddbb0a628af5a758e 191 Pfam PF00929 Exonuclease 13 178 6.9E-18 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01466 d154da3719b31b1b7d07f6b95fcd9922 160 SUPERFAMILY SSF56925 17 159 4.71E-21 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAA_01466 d154da3719b31b1b7d07f6b95fcd9922 160 Gene3D G3DSA:2.40.160.20 19 160 3.8E-25 T 13-10-2018 VAA_01466 d154da3719b31b1b7d07f6b95fcd9922 160 Pfam PF13505 Outer membrane protein beta-barrel domain 5 159 4.3E-16 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 SUPERFAMILY SSF56519 57 254 5.23E-57 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 1.8E-235 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 52.67 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 2.5E-72 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 Gene3D G3DSA:3.90.1310.10 65 248 5.5E-53 T 13-10-2018 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 Gene3D G3DSA:3.30.1390.30 86 161 5.5E-53 T 13-10-2018 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 SUPERFAMILY SSF56601 255 619 5.27E-94 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 3.8E-51 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VAA_01098 f99f6770b2ade0594c5745fa258df81e 626 Gene3D G3DSA:3.40.710.10 249 625 3.8E-92 T 13-10-2018 VAA_03685 b0872a5fdddfc957fbac72082add03b6 167 Gene3D G3DSA:2.40.160.10 40 167 2.0E-5 T 13-10-2018 IPR023614 Porin domain superfamily VAA_03685 b0872a5fdddfc957fbac72082add03b6 167 SUPERFAMILY SSF56935 59 160 6.41E-6 T 13-10-2018 VAA_03685 b0872a5fdddfc957fbac72082add03b6 167 PIRSF PIRSF028680 14 167 8.7E-63 T 13-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VAA_00822 099858f881cbbe27887ef12c135da097 405 Gene3D G3DSA:1.20.1720.10 12 382 1.4E-76 T 13-10-2018 VAA_00822 099858f881cbbe27887ef12c135da097 405 SUPERFAMILY SSF103473 9 381 1.96E-55 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00822 099858f881cbbe27887ef12c135da097 405 Pfam PF07690 Major Facilitator Superfamily 17 344 4.0E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_00822 099858f881cbbe27887ef12c135da097 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 373 2.9E-86 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VAA_03178 96239922b80756d705d1b174cdde4b44 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 13-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 VAA_03178 96239922b80756d705d1b174cdde4b44 269 Gene3D G3DSA:3.60.10.10 1 268 9.1E-80 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_03178 96239922b80756d705d1b174cdde4b44 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 2.1E-22 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VAA_03178 96239922b80756d705d1b174cdde4b44 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 7.6E-103 T 13-10-2018 VAA_03178 96239922b80756d705d1b174cdde4b44 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.3E-87 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VAA_03178 96239922b80756d705d1b174cdde4b44 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VAA_03178 96239922b80756d705d1b174cdde4b44 269 SUPERFAMILY SSF56219 1 268 4.58E-88 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_00666 411e74751221e7abdd48406c18301fa6 362 SMART SM00387 247 362 5.4E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00666 411e74751221e7abdd48406c18301fa6 362 SUPERFAMILY SSF55785 21 115 1.61E-10 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00666 411e74751221e7abdd48406c18301fa6 362 SUPERFAMILY SSF55874 212 361 5.37E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00666 411e74751221e7abdd48406c18301fa6 362 SMART SM00388 143 208 6.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00666 411e74751221e7abdd48406c18301fa6 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00666 411e74751221e7abdd48406c18301fa6 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00666 411e74751221e7abdd48406c18301fa6 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00666 411e74751221e7abdd48406c18301fa6 362 Pfam PF00989 PAS fold 21 125 3.8E-17 T 13-10-2018 IPR013767 PAS fold GO:0006355 VAA_00666 411e74751221e7abdd48406c18301fa6 362 Pfam PF00512 His Kinase A (phospho-acceptor) domain 147 203 5.8E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00666 411e74751221e7abdd48406c18301fa6 362 Gene3D G3DSA:1.10.287.130 147 205 1.4E-13 T 13-10-2018 VAA_00666 411e74751221e7abdd48406c18301fa6 362 Gene3D G3DSA:3.30.450.20 14 126 2.8E-29 T 13-10-2018 VAA_00666 411e74751221e7abdd48406c18301fa6 362 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 135 2.7E-7 T 13-10-2018 IPR000014 PAS domain VAA_00666 411e74751221e7abdd48406c18301fa6 362 SMART SM00091 18 86 1.7E-7 T 13-10-2018 IPR000014 PAS domain VAA_00666 411e74751221e7abdd48406c18301fa6 362 Gene3D G3DSA:3.30.565.10 206 362 2.6E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00666 411e74751221e7abdd48406c18301fa6 362 SUPERFAMILY SSF47384 139 203 3.14E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00666 411e74751221e7abdd48406c18301fa6 362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 361 1.9E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 Gene3D G3DSA:1.10.40.60 219 288 4.6E-91 T 13-10-2018 IPR038072 GspK, central domain superfamily VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 SUPERFAMILY SSF158544 218 285 3.66E-19 T 13-10-2018 IPR038072 GspK, central domain superfamily VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 Pfam PF03934 Type II secretion system (T2SS), protein K 33 320 1.3E-85 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 Gene3D G3DSA:1.10.40.60 102 218 4.6E-91 T 13-10-2018 IPR038072 GspK, central domain superfamily VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 PIRSF PIRSF002786 4 331 5.1E-66 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 SUPERFAMILY SSF158544 104 216 1.12E-30 T 13-10-2018 IPR038072 GspK, central domain superfamily VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 Gene3D G3DSA:3.30.1300.30 45 312 4.6E-91 T 13-10-2018 VAA_00646 e00fd716ae61e0ff784842eadaea83f7 339 SUPERFAMILY SSF54523 39 328 5.81E-35 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 3.8E-223 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 SUPERFAMILY SSF52540 70 295 4.46E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 2.8E-9 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 Gene3D G3DSA:3.40.50.300 68 281 7.7E-40 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 Pfam PF13481 AAA domain 85 224 1.7E-13 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 10 34 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 176 200 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 215 243 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 324 347 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 85 113 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 126 143 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 PRINTS PR01874 DNA repair protein radA signature 250 276 1.0E-93 T 13-10-2018 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 Gene3D G3DSA:3.30.230.10 322 458 5.3E-21 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 42.75 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 SMART SM00382 93 246 5.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03663 e8a3658aafe2bdf7f46462010dcf6437 459 SUPERFAMILY SSF54211 257 456 1.93E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 SUPERFAMILY SSF102114 121 374 1.96E-61 T 13-10-2018 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 Gene3D G3DSA:3.80.30.20 145 377 2.3E-82 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 Pfam PF04055 Radical SAM superfamily 151 325 1.3E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.535 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.3E-150 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 SMART SM00729 147 367 5.3E-63 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 3.4E-196 T 13-10-2018 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 Gene3D G3DSA:3.40.50.12160 3 138 1.7E-34 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-29 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VAA_01087 3250e23d50afcc0b2d9bd42ec7a18248 474 Pfam PF01938 TRAM domain 379 440 4.2E-17 T 13-10-2018 IPR002792 TRAM domain VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 7.6E-20 T 13-10-2018 IPR001775 GspD/PilQ family VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 552 7.6E-20 T 13-10-2018 IPR001775 GspD/PilQ family VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 571 7.6E-20 T 13-10-2018 IPR001775 GspD/PilQ family VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 431 7.6E-20 T 13-10-2018 IPR001775 GspD/PilQ family VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 320 330 7.6E-20 T 13-10-2018 IPR001775 GspD/PilQ family VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 SMART SM00965 181 229 2.3E-9 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 156 569 1.1E-160 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 Gene3D G3DSA:2.60.40.3470 21 140 7.7E-14 T 13-10-2018 VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 Pfam PF00263 Bacterial type II and III secretion system protein 411 569 1.2E-45 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 Gene3D G3DSA:3.30.1370.120 228 322 1.1E-23 T 13-10-2018 IPR038591 NolW-like superfamily VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 Pfam PF03958 Bacterial type II/III secretion system short domain 255 320 1.5E-10 T 13-10-2018 IPR005644 NolW-like VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 515 548 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VAA_02632 0a9d731caa504cd8de39dfec1754eb9c 571 Gene3D G3DSA:3.55.50.30 154 227 3.4E-9 T 13-10-2018 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 Gene3D G3DSA:3.40.50.300 1 214 1.7E-77 T 13-10-2018 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 SUPERFAMILY SSF52540 1 188 7.39E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 Pfam PF00406 Adenylate kinase 5 185 4.3E-59 T 13-10-2018 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.41 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.3E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.3E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.3E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.3E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.3E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.0E-14 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VAA_02109 ca708d0a05dc6dae926dea32f01c9993 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 4.5E-75 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VAA_02630 39e37c4e440ad10e505aa6fd9ee296b4 197 Gene3D G3DSA:3.30.70.60 92 197 3.5E-27 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VAA_02630 39e37c4e440ad10e505aa6fd9ee296b4 197 Pfam PF04350 Pilus assembly protein, PilO 47 189 2.4E-47 T 13-10-2018 IPR007445 Pilus assembly protein, PilO VAA_02630 39e37c4e440ad10e505aa6fd9ee296b4 197 PIRSF PIRSF016482 1 197 6.7E-77 T 13-10-2018 IPR007445 Pilus assembly protein, PilO VAA_00390 0a28eec1d9584a0c0b21d4cbae597789 400 Pfam PF00589 Phage integrase family 215 381 1.2E-24 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_00390 0a28eec1d9584a0c0b21d4cbae597789 400 Gene3D G3DSA:1.10.443.10 213 393 1.4E-34 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00390 0a28eec1d9584a0c0b21d4cbae597789 400 Pfam PF13356 Arm DNA-binding domain 15 104 3.0E-11 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VAA_00390 0a28eec1d9584a0c0b21d4cbae597789 400 Gene3D G3DSA:1.10.150.130 115 212 5.9E-18 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00390 0a28eec1d9584a0c0b21d4cbae597789 400 SUPERFAMILY SSF56349 112 387 2.94E-60 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00390 0a28eec1d9584a0c0b21d4cbae597789 400 Gene3D G3DSA:3.30.160.390 25 114 2.0E-13 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAA_03218 969e6e1424cd243562762575eb66b7eb 120 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 13-10-2018 IPR019808 Histidine triad, conserved site VAA_03218 969e6e1424cd243562762575eb66b7eb 120 PRINTS PR00332 Histidine triad family signature 31 49 3.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VAA_03218 969e6e1424cd243562762575eb66b7eb 120 PRINTS PR00332 Histidine triad family signature 10 26 3.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VAA_03218 969e6e1424cd243562762575eb66b7eb 120 PRINTS PR00332 Histidine triad family signature 99 109 3.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VAA_03218 969e6e1424cd243562762575eb66b7eb 120 Gene3D G3DSA:3.30.428.10 3 115 9.5E-36 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03218 969e6e1424cd243562762575eb66b7eb 120 Pfam PF01230 HIT domain 16 113 8.4E-30 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VAA_03218 969e6e1424cd243562762575eb66b7eb 120 SUPERFAMILY SSF54197 6 117 1.36E-35 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03067 f036a9cc3670a5881d41fe14560db891 237 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 6 235 3.6E-77 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VAA_03067 f036a9cc3670a5881d41fe14560db891 237 Pfam PF13424 Tetratricopeptide repeat 104 169 6.1E-9 T 13-10-2018 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 SMART SM00028 35 68 0.11 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 SMART SM00028 69 102 1.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 SMART SM00028 139 172 34.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 SMART SM00028 103 136 20.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 Gene3D G3DSA:1.25.40.10 32 236 5.7E-37 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 SUPERFAMILY SSF81901 39 193 3.92E-19 T 13-10-2018 VAA_03067 f036a9cc3670a5881d41fe14560db891 237 Pfam PF13174 Tetratricopeptide repeat 72 101 0.034 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02195 5e4059ca31462b7fa1eaefea7764b82d 220 Gene3D G3DSA:3.40.50.880 15 220 2.0E-71 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_02195 5e4059ca31462b7fa1eaefea7764b82d 220 SUPERFAMILY SSF52317 16 219 1.58E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_02195 5e4059ca31462b7fa1eaefea7764b82d 220 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 17 220 33.874 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VAA_02195 5e4059ca31462b7fa1eaefea7764b82d 220 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 18 219 5.8E-67 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VAA_02195 5e4059ca31462b7fa1eaefea7764b82d 220 Pfam PF00117 Glutamine amidotransferase class-I 20 218 9.0E-18 T 13-10-2018 IPR017926 Glutamine amidotransferase VAA_02195 5e4059ca31462b7fa1eaefea7764b82d 220 PIRSF PIRSF000495 16 220 7.5E-64 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 SMART SM00636 23 416 7.6E-107 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 Gene3D G3DSA:3.20.20.80 24 423 2.0E-120 T 13-10-2018 VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 SUPERFAMILY SSF54556 313 387 5.22E-17 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 Gene3D G3DSA:3.10.50.10 312 390 2.0E-120 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 Pfam PF00704 Glycosyl hydrolases family 18 25 416 9.3E-79 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAA_01623 1393d6f9ab5b5864c7b44ab662c6ab4f 430 SUPERFAMILY SSF51445 18 418 2.33E-76 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_02568 4c13107dcd090eed2b238d6861f07668 484 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.6E-25 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02568 4c13107dcd090eed2b238d6861f07668 484 PRINTS PR00149 Fumarate lyase superfamily signature 194 212 1.6E-25 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02568 4c13107dcd090eed2b238d6861f07668 484 PRINTS PR00149 Fumarate lyase superfamily signature 285 312 1.6E-25 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02568 4c13107dcd090eed2b238d6861f07668 484 PRINTS PR00149 Fumarate lyase superfamily signature 331 347 1.6E-25 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02568 4c13107dcd090eed2b238d6861f07668 484 Gene3D G3DSA:1.10.40.30 422 471 6.6E-29 T 13-10-2018 VAA_02568 4c13107dcd090eed2b238d6861f07668 484 Gene3D G3DSA:1.20.200.10 154 421 2.2E-111 T 13-10-2018 VAA_02568 4c13107dcd090eed2b238d6861f07668 484 Pfam PF00206 Lyase 24 356 1.8E-99 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VAA_02568 4c13107dcd090eed2b238d6861f07668 484 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 17 483 9.0E-252 T 13-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VAA_02568 4c13107dcd090eed2b238d6861f07668 484 Pfam PF10415 Fumarase C C-terminus 422 474 1.8E-17 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VAA_02568 4c13107dcd090eed2b238d6861f07668 484 SUPERFAMILY SSF48557 15 468 7.81E-141 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAA_02568 4c13107dcd090eed2b238d6861f07668 484 ProSitePatterns PS00163 Fumarate lyases signature. 331 340 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAA_02568 4c13107dcd090eed2b238d6861f07668 484 Gene3D G3DSA:1.10.275.10 17 153 4.1E-58 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VAA_01162 8d179a4303a5a13e47ceabeb1311a09d 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VAA_01162 8d179a4303a5a13e47ceabeb1311a09d 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 212 2.8E-21 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAA_03362 d98790d639874da4fd588e056fcff940 769 Gene3D G3DSA:2.40.40.20 645 768 3.1E-5 T 13-10-2018 VAA_03362 d98790d639874da4fd588e056fcff940 769 PIRSF PIRSF000144 1 762 0.0 T 13-10-2018 VAA_03362 d98790d639874da4fd588e056fcff940 769 SUPERFAMILY SSF53706 44 628 1.14E-135 T 13-10-2018 VAA_03362 d98790d639874da4fd588e056fcff940 769 Pfam PF00384 Molybdopterin oxidoreductase 106 488 5.4E-23 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_03362 d98790d639874da4fd588e056fcff940 769 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 10 758 7.5E-282 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 VAA_03362 d98790d639874da4fd588e056fcff940 769 SUPERFAMILY SSF50692 635 762 2.26E-17 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAA_03362 d98790d639874da4fd588e056fcff940 769 Gene3D G3DSA:3.40.228.10 182 408 5.4E-62 T 13-10-2018 VAA_03362 d98790d639874da4fd588e056fcff940 769 Gene3D G3DSA:3.40.50.740 117 484 5.4E-62 T 13-10-2018 VAA_03362 d98790d639874da4fd588e056fcff940 769 Pfam PF01568 Molydopterin dinucleotide binding domain 645 751 4.1E-11 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAA_00279 09d7033e37d1744fcdb02369521be00a 510 SUPERFAMILY SSF53098 167 301 4.05E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00279 09d7033e37d1744fcdb02369521be00a 510 Pfam PF00665 Integrase core domain 140 267 3.3E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 13-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 SUPERFAMILY SSF53706 44 660 3.53E-167 T 13-10-2018 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 Gene3D G3DSA:3.90.55.10 82 615 2.3E-239 T 13-10-2018 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 Gene3D G3DSA:2.40.40.20 649 813 1.7E-45 T 13-10-2018 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 Gene3D G3DSA:3.40.228.10 179 641 2.3E-239 T 13-10-2018 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.3E-22 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 32 3.9E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 SUPERFAMILY SSF50692 669 817 5.2E-41 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 8.2E-80 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 Gene3D G3DSA:3.40.50.740 87 569 2.3E-239 T 13-10-2018 VAA_02145 96a6bb89984acc7bfa7763035dc7f467 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VAA_03877 809ab68b81865b7b7b49ce5dc82a4e1c 182 Gene3D G3DSA:3.40.50.1820 18 181 3.2E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03877 809ab68b81865b7b7b49ce5dc82a4e1c 182 SUPERFAMILY SSF53474 48 179 2.07E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03877 809ab68b81865b7b7b49ce5dc82a4e1c 182 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 6 181 1.3E-87 T 13-10-2018 IPR010520 UPF0255 family VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 SUPERFAMILY SSF50249 4 69 2.14E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 Gene3D G3DSA:2.40.50.140 2 70 9.4E-28 T 13-10-2018 VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.0E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 PRINTS PR00050 Cold shock protein signature 28 37 1.5E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 PRINTS PR00050 Cold shock protein signature 7 22 1.5E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 PRINTS PR00050 Cold shock protein signature 43 61 1.5E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 PIRSF PIRSF002599 1 70 2.7E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAA_02570 fbe58449b05934ada1da08f3dea92e78 70 SMART SM00357 6 70 2.2E-29 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 PIRSF PIRSF000726 2 450 1.4E-128 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 Gene3D G3DSA:3.30.70.260 310 379 8.9E-28 T 13-10-2018 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 Pfam PF00696 Amino acid kinase family 6 278 2.1E-46 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 Gene3D G3DSA:3.40.1160.10 6 290 4.0E-98 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 SUPERFAMILY SSF55021 375 449 1.26E-14 T 13-10-2018 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 4.0E-124 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 SUPERFAMILY SSF55021 298 393 2.11E-18 T 13-10-2018 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 9.1E-124 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 Gene3D G3DSA:3.30.70.260 380 450 5.4E-17 T 13-10-2018 VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 SUPERFAMILY SSF53633 6 292 2.36E-77 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_01747 2c8bfeb9c51fe883f4c4b865a0192ab2 450 Gene3D G3DSA:1.20.120.1320 42 135 4.0E-98 T 13-10-2018 VAA_02788 d67225e9916dbc6564669ece8bdbefa0 282 Gene3D G3DSA:2.70.70.10 109 230 6.1E-41 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_02788 d67225e9916dbc6564669ece8bdbefa0 282 SUPERFAMILY SSF51261 20 232 6.28E-51 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_02788 d67225e9916dbc6564669ece8bdbefa0 282 Pfam PF01551 Peptidase family M23 134 229 6.8E-28 T 13-10-2018 IPR016047 Peptidase M23 VAA_03056 9400101a078e19299c2ffecf12f06832 226 Gene3D G3DSA:3.40.50.2300 2 135 3.7E-26 T 13-10-2018 VAA_03056 9400101a078e19299c2ffecf12f06832 226 PIRSF PIRSF006171 1 226 5.2E-80 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VAA_03056 9400101a078e19299c2ffecf12f06832 226 Pfam PF12431 Transcriptional regulator 132 160 1.7E-7 T 13-10-2018 IPR028141 Transcriptional regulator VAA_03056 9400101a078e19299c2ffecf12f06832 226 Pfam PF00072 Response regulator receiver domain 5 116 1.3E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03056 9400101a078e19299c2ffecf12f06832 226 SMART SM00448 3 116 1.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03056 9400101a078e19299c2ffecf12f06832 226 SUPERFAMILY SSF52172 3 123 1.29E-31 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 SMART SM00283 365 626 6.8E-65 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 4.1E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 4.1E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 4.1E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 SUPERFAMILY SSF103190 76 175 1.54E-12 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 593 1.3E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 Pfam PF02743 Cache domain 40 258 4.6E-32 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 SUPERFAMILY SSF58104 318 627 1.31E-76 T 13-10-2018 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 Gene3D G3DSA:1.10.287.950 296 627 1.0E-72 T 13-10-2018 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 Pfam PF00672 HAMP domain 300 345 4.9E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 Gene3D G3DSA:3.30.450.20 64 168 3.2E-55 T 13-10-2018 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 Gene3D G3DSA:3.30.450.20 53 268 3.2E-55 T 13-10-2018 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 SMART SM00304 353 403 9.8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01406 f7c5b0df860a6f305f0fd4aeddd9da57 627 SMART SM00304 296 350 4.5E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00421 17404fe955ea662e697b48f70d08e268 330 SUPERFAMILY SSF51445 4 291 3.16E-85 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_00421 17404fe955ea662e697b48f70d08e268 330 Gene3D G3DSA:3.20.20.300 3 330 4.0E-127 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VAA_00421 17404fe955ea662e697b48f70d08e268 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 286 9.6E-82 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_00421 17404fe955ea662e697b48f70d08e268 330 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 231 248 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VAA_00421 17404fe955ea662e697b48f70d08e268 330 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 5 329 45.601 T 13-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 SUPERFAMILY SSF46894 142 213 9.52E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 9.0E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 SMART SM00421 154 211 4.9E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 Gene3D G3DSA:3.40.50.2300 11 145 8.5E-21 T 13-10-2018 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 Gene3D G3DSA:1.10.10.10 149 215 2.7E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 6.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 6.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01740 75674de07f72c7cdf8519ff0872ab88f 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 6.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 SUPERFAMILY SSF161093 280 450 3.66E-44 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Pfam PF03448 MgtE intracellular N domain 36 137 1.6E-26 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Gene3D G3DSA:1.10.357.20 277 451 1.5E-45 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Gene3D G3DSA:1.25.60.10 9 134 5.6E-21 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 SUPERFAMILY SSF54631 138 278 1.77E-28 T 13-10-2018 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 SMART SM00924 36 139 4.6E-37 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Gene3D G3DSA:3.10.580.10 135 262 3.5E-36 T 13-10-2018 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 450 3.1E-89 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 SUPERFAMILY SSF158791 13 136 2.22E-30 T 13-10-2018 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Pfam PF00571 CBS domain 217 257 2.5E-4 T 13-10-2018 IPR000644 CBS domain VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Pfam PF00571 CBS domain 140 196 6.1E-5 T 13-10-2018 IPR000644 CBS domain VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 Pfam PF01769 Divalent cation transporter 323 444 2.2E-23 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 SMART SM00116 146 199 41.0 T 13-10-2018 IPR000644 CBS domain VAA_02734 c6b437d5048e2ffdf08424e5d949e639 451 SMART SM00116 212 258 0.029 T 13-10-2018 IPR000644 CBS domain VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.4E-236 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 1.2E-84 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 SUPERFAMILY SSF53901 5 262 1.15E-80 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.133 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 Gene3D G3DSA:3.40.47.10 8 271 8.8E-152 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.2E-49 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.5E-143 T 13-10-2018 IPR002155 Thiolase GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 PIRSF PIRSF000429 2 391 3.1E-134 T 13-10-2018 IPR002155 Thiolase GO:0016747 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 SUPERFAMILY SSF53901 266 390 2.64E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_00819 bb649ef7dce23803277b8b23180d08b9 391 Gene3D G3DSA:3.40.47.10 138 385 8.8E-152 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 Pfam PF13353 4Fe-4S single cluster domain 28 130 7.6E-8 T 13-10-2018 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 Gene3D G3DSA:3.20.20.70 7 334 1.4E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 10 334 36.333 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 SUPERFAMILY SSF102114 11 283 1.57E-67 T 13-10-2018 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 SMART SM00729 19 224 2.4E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 334 1.2E-103 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 Pfam PF04055 Radical SAM superfamily 24 186 2.8E-24 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_02382 ffab546f0ec4235cb1bc8bc67d540e3e 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 317 5.5E-39 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_01585 dad53c854b879faf0480c82869373216 443 SUPERFAMILY SSF47384 189 224 6.67E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01585 dad53c854b879faf0480c82869373216 443 SMART SM00388 192 263 0.0088 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01585 dad53c854b879faf0480c82869373216 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 192 265 8.2E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01585 dad53c854b879faf0480c82869373216 443 SUPERFAMILY SSF55874 269 436 6.29E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01585 dad53c854b879faf0480c82869373216 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 1.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01585 dad53c854b879faf0480c82869373216 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01585 dad53c854b879faf0480c82869373216 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01585 dad53c854b879faf0480c82869373216 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 1.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01585 dad53c854b879faf0480c82869373216 443 Gene3D G3DSA:1.10.287.130 167 270 5.2E-15 T 13-10-2018 VAA_01585 dad53c854b879faf0480c82869373216 443 Gene3D G3DSA:3.30.565.10 279 438 1.1E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01585 dad53c854b879faf0480c82869373216 443 SMART SM00387 317 433 1.2E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01585 dad53c854b879faf0480c82869373216 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 431 2.4E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01260 41927e2cd448277bceeab5059c71233c 505 Pfam PF01381 Helix-turn-helix 19 79 1.4E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01260 41927e2cd448277bceeab5059c71233c 505 SUPERFAMILY SSF47413 12 85 1.94E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01260 41927e2cd448277bceeab5059c71233c 505 Gene3D G3DSA:1.10.260.40 11 94 1.1E-13 T 13-10-2018 VAA_01260 41927e2cd448277bceeab5059c71233c 505 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 1.8E-105 T 13-10-2018 IPR022055 Protein of unknown function DUF3612 VAA_01260 41927e2cd448277bceeab5059c71233c 505 SMART SM00530 17 79 3.9E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 SMART SM00138 23 286 3.9E-79 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 24 75 2.0E-14 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 Gene3D G3DSA:3.40.50.150 88 286 6.7E-61 T 13-10-2018 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 SUPERFAMILY SSF53335 89 284 6.89E-52 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 89 283 9.3E-56 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 Gene3D G3DSA:1.10.155.10 11 87 1.0E-21 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PIRSF PIRSF000410 6 286 2.9E-93 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PRINTS PR00996 Glutamate methyltransferase family signature 120 140 7.2E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PRINTS PR00996 Glutamate methyltransferase family signature 245 268 7.2E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 7.2E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PRINTS PR00996 Glutamate methyltransferase family signature 82 94 7.2E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PRINTS PR00996 Glutamate methyltransferase family signature 226 240 7.2E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 PRINTS PR00996 Glutamate methyltransferase family signature 45 58 7.2E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01906 617a5d7b707c30302d6d31c46a5d6ff1 286 SUPERFAMILY SSF47757 14 88 7.32E-19 T 13-10-2018 VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 SUPERFAMILY SSF82866 407 604 1.19E-41 T 13-10-2018 VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 Pfam PF02355 Protein export membrane protein 430 599 1.3E-17 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 Pfam PF07549 SecD/SecF GG Motif 127 151 5.3E-5 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 597 4.0E-129 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 Gene3D G3DSA:3.30.70.3400 233 434 6.9E-47 T 13-10-2018 VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 Gene3D G3DSA:3.30.1360.200 288 428 6.9E-47 T 13-10-2018 VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 Pfam PF13721 SecD export protein N-terminal TM region 14 108 2.3E-20 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 1.2E-73 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01049 b98aa1962d24d92c7939a7e6aaac9d73 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.955 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 Gene3D G3DSA:3.30.70.120 1 112 3.2E-47 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VAA_00766 a47f3527f1b0c738264e17b700313c14 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.7E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 SUPERFAMILY SSF54913 1 112 1.14E-45 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VAA_00766 a47f3527f1b0c738264e17b700313c14 112 SMART SM00938 4 105 3.5E-69 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 PIRSF PIRSF039144 1 112 5.6E-56 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00766 a47f3527f1b0c738264e17b700313c14 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-41 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Gene3D G3DSA:1.10.10.10 29 123 1.3E-45 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Gene3D G3DSA:1.20.58.590 124 316 6.0E-80 T 13-10-2018 IPR036141 MukF, middle domain superfamily VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 SUPERFAMILY SSF140570 124 286 1.22E-76 T 13-10-2018 IPR036141 MukF, middle domain superfamily VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Pfam PF17193 MukF C-terminal domain 288 445 1.1E-76 T 13-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 PIRSF PIRSF018282 1 445 2.2E-245 T 13-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Gene3D G3DSA:1.10.225.40 358 445 2.7E-37 T 13-10-2018 IPR038198 MukF, C-terminal domain superfamily VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 SUPERFAMILY SSF46785 13 123 2.99E-44 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Pfam PF03882 MukF winged-helix domain 10 122 8.6E-54 T 13-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.314 T 13-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VAA_02166 a1e11f7e2e4713f3660aca6577679c73 445 Pfam PF17192 MukF middle domain 126 286 9.4E-80 T 13-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 Gene3D G3DSA:3.30.9.10 349 573 4.6E-132 T 13-10-2018 VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.171 T 13-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 Pfam PF01266 FAD dependent oxidoreductase 265 636 2.0E-42 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 666 1.0E-151 T 13-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 Gene3D G3DSA:3.40.50.150 7 251 1.9E-106 T 13-10-2018 VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 SUPERFAMILY SSF51905 264 662 3.04E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 6.4E-47 T 13-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VAA_03433 fbd9ec695456252edbdc0eb68125b552 675 Gene3D G3DSA:3.50.50.60 265 663 4.6E-132 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 7.4E-7 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 7.4E-7 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 7.4E-7 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 177 2.1E-42 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 495 544 1.3E-9 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Gene3D G3DSA:3.40.120.10 32 185 4.4E-48 T 13-10-2018 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 SUPERFAMILY SSF53738 203 312 3.73E-20 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Gene3D G3DSA:3.40.120.10 324 444 1.7E-31 T 13-10-2018 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 SUPERFAMILY SSF53738 302 446 1.69E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 SUPERFAMILY SSF53738 29 217 3.85E-44 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Gene3D G3DSA:3.30.310.50 448 553 1.3E-7 T 13-10-2018 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 438 5.6E-16 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 SUPERFAMILY SSF55957 436 555 1.57E-14 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Gene3D G3DSA:3.40.120.10 204 323 4.3E-20 T 13-10-2018 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01277 27f0a046a1725557d768fc37a5ebb0a1 567 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 205 310 1.6E-23 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_0520 372529636905eb942a8c95103eab1940 187 SUPERFAMILY SSF46785 16 144 2.1E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_0520 372529636905eb942a8c95103eab1940 187 Gene3D G3DSA:1.10.10.10 15 158 1.0E-52 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_0520 372529636905eb942a8c95103eab1940 187 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 15 148 1.2E-64 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VAA_0520 372529636905eb942a8c95103eab1940 187 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 15 144 1.2E-46 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type VAA_0520 372529636905eb942a8c95103eab1940 187 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 15 187 49.656 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VAA_0520 372529636905eb942a8c95103eab1940 187 Pfam PF02082 Transcriptional regulator 15 97 1.4E-27 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type VAA_0520 372529636905eb942a8c95103eab1940 187 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 63 81 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 Gene3D G3DSA:1.10.8.10 5 89 1.2E-24 T 13-10-2018 VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 277 9.3E-92 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 6 281 44.915 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 Pfam PF13847 Methyltransferase domain 117 246 2.4E-19 T 13-10-2018 IPR025714 Methyltransferase domain VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 282 1.3E-81 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 SUPERFAMILY SSF53335 6 281 6.98E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03501 ef023d3f6987121252ded648d1d9eaf2 293 Gene3D G3DSA:3.40.50.150 90 282 3.0E-61 T 13-10-2018 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 Gene3D G3DSA:1.10.155.10 14 95 4.6E-19 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 SMART SM00138 25 288 2.4E-66 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PRINTS PR00996 Glutamate methyltransferase family signature 125 145 1.1E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 1.1E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PRINTS PR00996 Glutamate methyltransferase family signature 90 102 1.1E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PRINTS PR00996 Glutamate methyltransferase family signature 156 172 1.1E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PRINTS PR00996 Glutamate methyltransferase family signature 47 60 1.1E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 1.1E-38 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 75 7.5E-15 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 Gene3D G3DSA:3.40.50.150 96 288 3.2E-56 T 13-10-2018 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 Pfam PF01739 CheR methyltransferase, SAM binding domain 97 273 1.3E-51 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 SUPERFAMILY SSF47757 17 96 2.62E-16 T 13-10-2018 VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 SUPERFAMILY SSF53335 97 273 3.96E-46 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01417 0ddc02e0c74bc9ef950af1fd8b2df9dc 292 PIRSF PIRSF000410 5 289 1.2E-87 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VAA_02850 96a91851943d4a1ed42f24d69ab7e719 273 Pfam PF13503 Domain of unknown function (DUF4123) 22 133 5.8E-18 T 13-10-2018 IPR025391 Domain of unknown function DUF4123 VAA_02973 ddd57e20ec785c9ab7b7f1bcd1d2774e 292 SUPERFAMILY SSF46785 1 86 1.03E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02973 ddd57e20ec785c9ab7b7f1bcd1d2774e 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.3E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02973 ddd57e20ec785c9ab7b7f1bcd1d2774e 292 Gene3D G3DSA:3.40.190.290 92 287 4.7E-36 T 13-10-2018 VAA_02973 ddd57e20ec785c9ab7b7f1bcd1d2774e 292 Pfam PF03466 LysR substrate binding domain 109 287 1.2E-14 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02973 ddd57e20ec785c9ab7b7f1bcd1d2774e 292 SUPERFAMILY SSF53850 92 288 2.9E-22 T 13-10-2018 VAA_02973 ddd57e20ec785c9ab7b7f1bcd1d2774e 292 Gene3D G3DSA:1.10.10.10 1 88 1.4E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00525 792584b24aa259d58df4779c6e7678b7 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 1.5E-15 T 13-10-2018 IPR003849 Preprotein translocase YajC VAA_00525 792584b24aa259d58df4779c6e7678b7 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 1.5E-15 T 13-10-2018 IPR003849 Preprotein translocase YajC VAA_00525 792584b24aa259d58df4779c6e7678b7 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 102 4.8E-29 T 13-10-2018 IPR003849 Preprotein translocase YajC VAA_00525 792584b24aa259d58df4779c6e7678b7 110 SMART SM01323 18 102 6.1E-37 T 13-10-2018 IPR003849 Preprotein translocase YajC VAA_00525 792584b24aa259d58df4779c6e7678b7 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.5E-25 T 13-10-2018 IPR003849 Preprotein translocase YajC VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 PIRSF PIRSF036437 6 969 0.0 T 13-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Gene3D G3DSA:3.30.565.10 538 702 6.8E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Gene3D G3DSA:3.40.50.2300 706 842 7.4E-32 T 13-10-2018 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Gene3D G3DSA:1.20.58.920 187 327 1.8E-50 T 13-10-2018 IPR038188 TorS, sensor domain superfamily VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Gene3D G3DSA:1.20.58.920 52 186 5.6E-44 T 13-10-2018 IPR038188 TorS, sensor domain superfamily VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 12 965 0.0 T 13-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Pfam PF00512 His Kinase A (phospho-acceptor) domain 475 539 5.8E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SMART SM00388 474 539 2.2E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Pfam PF00072 Response regulator receiver domain 720 835 4.7E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SUPERFAMILY SSF47384 463 540 2.35E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SUPERFAMILY SSF47226 864 963 4.97E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SMART SM00387 586 699 5.0E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Gene3D G3DSA:1.10.287.130 439 537 1.6E-26 T 13-10-2018 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 586 698 3.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SUPERFAMILY SSF52172 718 853 3.27E-31 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Pfam PF01627 Hpt domain 886 959 7.8E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SMART SM00448 717 835 1.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 SUPERFAMILY SSF55874 528 701 1.18E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 Gene3D G3DSA:1.20.120.160 856 968 2.1E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 677 1.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 653 1.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 696 1.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01560 c7208c8fab620a5b5b5f87082b2b3f59 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 1.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02135 da0f87cc72f5e04c77434b382117048e 320 SUPERFAMILY SSF161098 69 298 9.65E-20 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02135 da0f87cc72f5e04c77434b382117048e 320 Gene3D G3DSA:1.10.3720.10 67 308 2.2E-23 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02135 da0f87cc72f5e04c77434b382117048e 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.9E-41 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 SMART SM00283 307 568 1.1E-60 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 432 7.0E-25 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 7.0E-25 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 7.0E-25 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 Pfam PF00672 HAMP domain 240 288 6.0E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 381 529 4.3E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 SUPERFAMILY SSF58104 262 569 1.23E-68 T 13-10-2018 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 SMART SM00304 240 292 6.9E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00985 1f229195a1bb411f1d670e346617e49e 573 Gene3D G3DSA:1.10.287.950 239 570 2.2E-68 T 13-10-2018 VAA_00930 4e1c2e9cc9d43cbe811b7c7c0f8dd055 119 Pfam PF01844 HNH endonuclease 36 84 1.4E-10 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VAA_00930 4e1c2e9cc9d43cbe811b7c7c0f8dd055 119 SMART SM00507 24 79 4.7E-5 T 13-10-2018 IPR003615 HNH nuclease VAA_01965 afff773adeb5c44713f7031504fc05a4 408 SUPERFAMILY SSF109604 185 404 4.08E-41 T 13-10-2018 VAA_01965 afff773adeb5c44713f7031504fc05a4 408 SUPERFAMILY SSF141868 5 199 3.27E-26 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01965 afff773adeb5c44713f7031504fc05a4 408 Pfam PF08668 HDOD domain 208 324 5.4E-13 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAA_01965 afff773adeb5c44713f7031504fc05a4 408 Pfam PF00563 EAL domain 77 194 1.8E-11 T 13-10-2018 IPR001633 EAL domain VAA_01965 afff773adeb5c44713f7031504fc05a4 408 SMART SM00052 2 199 0.0078 T 13-10-2018 IPR001633 EAL domain VAA_01965 afff773adeb5c44713f7031504fc05a4 408 Gene3D G3DSA:3.20.20.450 2 204 1.9E-16 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01965 afff773adeb5c44713f7031504fc05a4 408 Gene3D G3DSA:1.10.3210.10 205 406 3.5E-25 T 13-10-2018 VAA_01965 afff773adeb5c44713f7031504fc05a4 408 PIRSF PIRSF003180 1 408 2.9E-165 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 Gene3D G3DSA:3.40.50.1010 15 167 6.6E-27 T 13-10-2018 VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 Pfam PF02562 PhoH-like protein 260 464 2.2E-54 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 SUPERFAMILY SSF52540 259 449 1.81E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 Pfam PF13638 PIN domain 21 162 2.7E-34 T 13-10-2018 IPR002716 PIN domain VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 Gene3D G3DSA:3.40.50.300 257 468 1.2E-65 T 13-10-2018 VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 SMART SM00670 19 153 9.6E-11 T 13-10-2018 IPR002716 PIN domain VAA_02764 f25f1e6adfa74a5b5fd495d624888a14 470 SUPERFAMILY SSF88723 19 168 5.1E-14 T 13-10-2018 IPR029060 PIN-like domain superfamily VAA_00987 da1e7c51c3f7942db7b0f444f291f23c 240 Pfam PF08857 Putative ParB-like nuclease 35 189 1.2E-49 T 13-10-2018 IPR014956 Putative ParB-like nuclease VAA_00987 da1e7c51c3f7942db7b0f444f291f23c 240 Gene3D G3DSA:1.10.8.10 157 219 1.5E-9 T 13-10-2018 VAA_00987 da1e7c51c3f7942db7b0f444f291f23c 240 Gene3D G3DSA:3.90.1530.10 31 156 8.1E-36 T 13-10-2018 VAA_00987 da1e7c51c3f7942db7b0f444f291f23c 240 PIRSF PIRSF029669 25 230 9.5E-65 T 13-10-2018 IPR016932 Uncharacterised conserved protein UCP029669 VAA_00987 da1e7c51c3f7942db7b0f444f291f23c 240 SUPERFAMILY SSF110849 32 226 1.73E-57 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 269 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 PIRSF PIRSF000521 181 412 1.1E-36 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 PIRSF PIRSF000521 33 167 2.3E-7 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 17 412 1.4E-207 T 13-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 Gene3D G3DSA:3.40.640.10 69 314 1.9E-150 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 SUPERFAMILY SSF53383 26 410 5.51E-127 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 Pfam PF00202 Aminotransferase class-III 32 409 2.3E-130 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 25 412 69.504 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 Gene3D G3DSA:3.90.1150.10 35 402 1.9E-150 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02647 49ffb06509f2f11646a8923c7ded5407 413 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 26 409 1.0E-151 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VAA_03627 ca8efd18e7f2006af8afc70e3391cec2 199 Pfam PF01965 DJ-1/PfpI family 3 169 1.0E-39 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VAA_03627 ca8efd18e7f2006af8afc70e3391cec2 199 SUPERFAMILY SSF52317 3 188 3.85E-45 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03627 ca8efd18e7f2006af8afc70e3391cec2 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 1.1E-59 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 VAA_03627 ca8efd18e7f2006af8afc70e3391cec2 199 Gene3D G3DSA:3.40.50.880 1 195 1.3E-50 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.039 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Gene3D G3DSA:3.30.413.10 146 353 9.7E-84 T 13-10-2018 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Gene3D G3DSA:3.30.413.10 431 574 2.9E-33 T 13-10-2018 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 SUPERFAMILY SSF56014 154 349 1.44E-57 T 13-10-2018 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 3.2E-282 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 436 524 2.4E-4 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 335 2.7E-45 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Gene3D G3DSA:3.90.480.20 21 419 9.7E-84 T 13-10-2018 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 SUPERFAMILY SSF55124 17 150 2.78E-28 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 SUPERFAMILY SSF56014 434 566 9.68E-31 T 13-10-2018 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 5.9E-9 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 5.9E-9 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 SUPERFAMILY SSF55124 351 429 5.72E-20 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00272 1d4ba4949594301bd67d54a1adedda93 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 357 422 6.4E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_02175 3e65911d2d0d59b33deb345d2c27cc4f 266 Pfam PF00561 alpha/beta hydrolase fold 19 121 1.0E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_02175 3e65911d2d0d59b33deb345d2c27cc4f 266 SUPERFAMILY SSF53474 11 263 1.45E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02175 3e65911d2d0d59b33deb345d2c27cc4f 266 Gene3D G3DSA:3.40.50.1820 9 266 1.1E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00833 731055e593cd464714a7cb464f051077 293 Pfam PF02195 ParB-like nuclease domain 42 130 2.2E-28 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VAA_00833 731055e593cd464714a7cb464f051077 293 SUPERFAMILY SSF110849 42 175 4.92E-33 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VAA_00833 731055e593cd464714a7cb464f051077 293 Gene3D G3DSA:1.10.10.2830 117 230 3.0E-34 T 13-10-2018 VAA_00833 731055e593cd464714a7cb464f051077 293 Gene3D G3DSA:3.90.1530.30 53 116 3.2E-27 T 13-10-2018 VAA_00833 731055e593cd464714a7cb464f051077 293 SMART SM00470 40 130 3.9E-36 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VAA_00833 731055e593cd464714a7cb464f051077 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 213 1.8E-56 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 SUPERFAMILY SSF51569 4 303 3.66E-91 T 13-10-2018 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 SUPERFAMILY SSF51230 522 597 1.7E-22 T 13-10-2018 IPR011053 Single hybrid motif VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 Pfam PF00682 HMGL-like 10 273 9.5E-65 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 Gene3D G3DSA:2.40.50.100 522 598 7.7E-26 T 13-10-2018 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 594 4.6E-275 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 554 571 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 SUPERFAMILY SSF89000 300 455 1.33E-47 T 13-10-2018 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 Pfam PF02436 Conserved carboxylase domain 295 494 7.0E-56 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 Gene3D G3DSA:3.20.20.70 1 463 3.0E-172 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02020 88ed6e4cbed42fbf6e3c66914598cedc 598 Pfam PF00364 Biotin-requiring enzyme 535 597 1.4E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 SMART SM00091 21 84 7.8E-5 T 13-10-2018 IPR000014 PAS domain VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 Pfam PF13188 PAS domain 21 73 1.2E-7 T 13-10-2018 IPR000014 PAS domain VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 Gene3D G3DSA:1.10.287.130 112 188 4.9E-9 T 13-10-2018 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 Gene3D G3DSA:3.30.565.10 193 345 1.5E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 Gene3D G3DSA:3.30.450.20 12 111 3.9E-6 T 13-10-2018 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 SUPERFAMILY SSF55874 180 338 5.24E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 SMART SM00387 234 340 6.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 SUPERFAMILY SSF47384 120 191 5.89E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 2.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 2.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 2.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 2.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 339 1.8E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 1.5E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 SUPERFAMILY SSF55785 21 88 1.11E-7 T 13-10-2018 IPR035965 PAS domain superfamily VAA_03461 7b2bd07ec830f75edc8f2cc614adb022 352 SMART SM00388 125 191 5.5E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03502 131eeabbe142809d4af339129212f6ec 362 Gene3D G3DSA:1.20.58.410 2 104 6.3E-8 T 13-10-2018 VAA_03502 131eeabbe142809d4af339129212f6ec 362 Gene3D G3DSA:3.30.160.20 212 293 8.9E-95 T 13-10-2018 VAA_03502 131eeabbe142809d4af339129212f6ec 362 Pfam PF03462 PCRF domain 13 205 2.2E-76 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAA_03502 131eeabbe142809d4af339129212f6ec 362 Pfam PF00472 RF-1 domain 218 323 3.3E-39 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAA_03502 131eeabbe142809d4af339129212f6ec 362 SUPERFAMILY SSF75620 12 355 3.27E-137 T 13-10-2018 VAA_03502 131eeabbe142809d4af339129212f6ec 362 SMART SM00937 67 180 1.2E-66 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VAA_03502 131eeabbe142809d4af339129212f6ec 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VAA_03502 131eeabbe142809d4af339129212f6ec 362 Gene3D G3DSA:3.30.70.1660 115 343 8.9E-95 T 13-10-2018 VAA_03502 131eeabbe142809d4af339129212f6ec 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.941 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VAA_03502 131eeabbe142809d4af339129212f6ec 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 9.1E-171 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VAA_02999 7330d40bae24deef5ae05d390b3f4dcc 393 Pfam PF11301 Protein of unknown function (DUF3103) 40 391 5.3E-181 T 13-10-2018 IPR021452 Protein of unknown function DUF3103 VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 SUPERFAMILY SSF55781 19 164 6.54E-21 T 13-10-2018 VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 SMART SM00052 372 617 3.8E-100 T 13-10-2018 IPR001633 EAL domain VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 1.3E-16 T 13-10-2018 IPR000160 GGDEF domain VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 SUPERFAMILY SSF141868 377 627 3.01E-84 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 SUPERFAMILY SSF55073 209 360 1.33E-15 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 Pfam PF01590 GAF domain 20 148 1.3E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 Gene3D G3DSA:3.30.450.40 14 162 3.0E-13 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 200 359 6.0E-11 T 13-10-2018 IPR000160 GGDEF domain VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 Gene3D G3DSA:3.20.20.450 374 625 1.4E-89 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 SMART SM00065 14 168 1.0E-4 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 Gene3D G3DSA:3.30.70.270 189 362 2.0E-18 T 13-10-2018 VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 Pfam PF00563 EAL domain 380 612 3.4E-69 T 13-10-2018 IPR001633 EAL domain VAA_01499 3f2f62db462e97fdfcfee01483d86977 636 SMART SM00267 192 362 1.6E-7 T 13-10-2018 IPR000160 GGDEF domain VAA_01050 bc6667e72f239336168e1124843f860d 300 Pfam PF02355 Protein export membrane protein 103 284 9.5E-56 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAA_01050 bc6667e72f239336168e1124843f860d 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01050 bc6667e72f239336168e1124843f860d 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01050 bc6667e72f239336168e1124843f860d 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01050 bc6667e72f239336168e1124843f860d 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01050 bc6667e72f239336168e1124843f860d 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 6.6E-65 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAA_01050 bc6667e72f239336168e1124843f860d 300 Gene3D G3DSA:1.20.1640.10 104 291 5.3E-11 T 13-10-2018 VAA_01050 bc6667e72f239336168e1124843f860d 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 107 274 3.7E-48 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_01050 bc6667e72f239336168e1124843f860d 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 287 22.237 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VAA_01050 bc6667e72f239336168e1124843f860d 300 SUPERFAMILY SSF82866 103 283 3.14E-35 T 13-10-2018 VAA_01050 bc6667e72f239336168e1124843f860d 300 Pfam PF07549 SecD/SecF GG Motif 29 55 3.1E-8 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAA_00561 51b7195f41a67ed9203e2cf53bcf2b13 333 Gene3D G3DSA:3.40.50.2300 139 324 2.1E-124 T 13-10-2018 VAA_00561 51b7195f41a67ed9203e2cf53bcf2b13 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 33 326 1.2E-72 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAA_00561 51b7195f41a67ed9203e2cf53bcf2b13 333 Gene3D G3DSA:3.40.50.2300 34 315 2.1E-124 T 13-10-2018 VAA_00561 51b7195f41a67ed9203e2cf53bcf2b13 333 PIRSF PIRSF002816 1 333 9.7E-147 T 13-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 VAA_00561 51b7195f41a67ed9203e2cf53bcf2b13 333 SUPERFAMILY SSF53822 33 330 3.73E-66 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.451 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 2.3E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 2.3E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 2.3E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 2.3E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 2.3E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 Gene3D G3DSA:3.40.50.1370 5 329 2.6E-143 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.2E-44 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 2.3E-132 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 4.9E-55 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 Gene3D G3DSA:3.40.50.1370 151 319 2.6E-143 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02763 68651fe9b4c512c635e3abe67466dae6 334 SUPERFAMILY SSF53671 4 333 3.27E-96 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_00879 b676ffb0f30effb5c3d15571dd052097 401 SUPERFAMILY SSF56281 6 284 3.25E-11 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 SUPERFAMILY SSF50104 125 181 4.21E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 SMART SM00738 6 115 5.0E-48 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 Gene3D G3DSA:2.30.30.30 123 181 4.6E-25 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 9.4E-22 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 9.4E-22 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 9.4E-22 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 Gene3D G3DSA:3.30.70.940 1 122 1.5E-46 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 SMART SM00739 127 154 4.8E-5 T 13-10-2018 IPR005824 KOW VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.456 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 Pfam PF00467 KOW motif 131 160 3.7E-7 T 13-10-2018 IPR005824 KOW VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 SUPERFAMILY SSF82679 6 116 2.88E-39 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 9.2E-70 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VAA_00356 7d987b5eecbbbb59f61f241ff27e56de 182 Pfam PF02357 Transcription termination factor nusG 7 112 4.9E-26 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Pfam PF01627 Hpt domain 1156 1242 1.2E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SMART SM00073 1147 1243 3.9E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:1.10.287.130 586 669 1.2E-29 T 13-10-2018 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 671 8.9E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 718 830 8.6E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:3.30.450.20 468 585 4.1E-17 T 13-10-2018 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF52172 851 981 1.85E-26 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SMART SM00448 852 965 5.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SMART SM00448 992 1105 1.1E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 475 593 1.7E-13 T 13-10-2018 IPR000014 PAS domain VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 5.7E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 5.7E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 5.7E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 5.7E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF55874 660 830 4.45E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF52172 992 1110 3.98E-38 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:1.20.120.160 1134 1252 1.7E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SMART SM00388 606 671 1.7E-26 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:3.30.565.10 670 838 1.8E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF55785 485 595 7.33E-17 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:3.40.50.2300 850 986 4.8E-25 T 13-10-2018 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF55781 288 451 3.47E-7 T 13-10-2018 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Pfam PF08448 PAS fold 478 588 1.0E-9 T 13-10-2018 IPR013656 PAS fold-4 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:3.30.450.40 298 466 6.0E-6 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF47226 1133 1246 8.77E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Pfam PF00072 Response regulator receiver domain 994 1105 2.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Pfam PF00072 Response regulator receiver domain 855 965 2.6E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 Gene3D G3DSA:3.40.50.2300 991 1117 7.1E-42 T 13-10-2018 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SUPERFAMILY SSF47384 590 672 1.06E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SMART SM00387 718 834 6.1E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02953 8b49216d43ff41a527e0b54880a1ecc6 1320 SMART SM00091 472 538 2.1E-6 T 13-10-2018 IPR000014 PAS domain VAA_00141 d770e466bd6d1bf0b5b3e34ce69c8136 439 Pfam PF13657 HipA N-terminal domain 17 111 2.6E-15 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_00141 d770e466bd6d1bf0b5b3e34ce69c8136 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 15 111 3.9E-20 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_00141 d770e466bd6d1bf0b5b3e34ce69c8136 439 Pfam PF07804 HipA-like C-terminal domain 153 403 1.8E-48 T 13-10-2018 IPR012893 HipA-like, C-terminal VAA_00803 1752053d6495e4112793f70d3689e115 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 9.8E-125 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VAA_00803 1752053d6495e4112793f70d3689e115 495 SUPERFAMILY SSF69705 1 126 2.35E-38 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VAA_00803 1752053d6495e4112793f70d3689e115 495 SUPERFAMILY SSF47794 349 414 2.2E-15 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VAA_00803 1752053d6495e4112793f70d3689e115 495 Pfam PF08529 NusA N-terminal domain 4 123 1.6E-33 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VAA_00803 1752053d6495e4112793f70d3689e115 495 Gene3D G3DSA:3.30.300.20 278 344 3.6E-24 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_00803 1752053d6495e4112793f70d3689e115 495 SUPERFAMILY SSF47794 429 491 9.73E-17 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VAA_00803 1752053d6495e4112793f70d3689e115 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.784 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VAA_00803 1752053d6495e4112793f70d3689e115 495 Gene3D G3DSA:1.10.150.20 431 490 5.6E-25 T 13-10-2018 VAA_00803 1752053d6495e4112793f70d3689e115 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 6.2E-18 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VAA_00803 1752053d6495e4112793f70d3689e115 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.5E-19 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VAA_00803 1752053d6495e4112793f70d3689e115 495 SUPERFAMILY SSF50249 132 199 6.35E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00803 1752053d6495e4112793f70d3689e115 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.8E-9 T 13-10-2018 VAA_00803 1752053d6495e4112793f70d3689e115 495 Gene3D G3DSA:3.30.1480.10 1 129 1.9E-42 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VAA_00803 1752053d6495e4112793f70d3689e115 495 Pfam PF13184 NusA-like KH domain 230 297 7.2E-28 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VAA_00803 1752053d6495e4112793f70d3689e115 495 Gene3D G3DSA:1.10.150.20 352 421 2.0E-28 T 13-10-2018 VAA_00803 1752053d6495e4112793f70d3689e115 495 SMART SM00316 133 198 3.6E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_00803 1752053d6495e4112793f70d3689e115 495 Gene3D G3DSA:3.30.300.20 199 277 2.0E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_00803 1752053d6495e4112793f70d3689e115 495 SUPERFAMILY SSF54814 201 278 1.37E-28 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAA_00803 1752053d6495e4112793f70d3689e115 495 SUPERFAMILY SSF54814 279 342 5.04E-15 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAA_00803 1752053d6495e4112793f70d3689e115 495 SMART SM00322 230 293 17.0 T 13-10-2018 IPR004087 K Homology domain GO:0003676 VAA_00803 1752053d6495e4112793f70d3689e115 495 SMART SM00322 301 375 0.015 T 13-10-2018 IPR004087 K Homology domain GO:0003676 VAA_00803 1752053d6495e4112793f70d3689e115 495 Gene3D G3DSA:2.40.50.140 135 198 7.4E-18 T 13-10-2018 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 1.5E-75 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 Gene3D G3DSA:3.40.1160.10 4 244 1.0E-80 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 SUPERFAMILY SSF53633 6 243 2.36E-74 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 Pfam PF00696 Amino acid kinase family 5 231 1.4E-52 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 Gene3D G3DSA:3.30.2130.10 246 382 3.0E-5 T 13-10-2018 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 PIRSF PIRSF000726 3 63 6.8E-23 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 PIRSF PIRSF000726 59 298 7.8E-74 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_00707 41ac5dd856c50a45ea861415b9446d50 395 PIRSF PIRSF000726 307 385 6.1 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_00504 3f9de309135033026fc98df07a2591b9 510 SUPERFAMILY SSF52540 19 183 2.92E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00504 3f9de309135033026fc98df07a2591b9 510 Gene3D G3DSA:3.30.300.20 397 479 8.0E-19 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_00504 3f9de309135033026fc98df07a2591b9 510 SUPERFAMILY SSF52540 155 483 4.78E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00504 3f9de309135033026fc98df07a2591b9 510 PIRSF PIRSF006485 16 485 1.7E-178 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 386 9.6E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 169 2.7E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 SMART SM00382 220 363 0.18 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00504 3f9de309135033026fc98df07a2591b9 510 SMART SM00382 16 188 1.8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00504 3f9de309135033026fc98df07a2591b9 510 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 397 476 3.3E-24 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VAA_00504 3f9de309135033026fc98df07a2591b9 510 Gene3D G3DSA:3.40.50.300 216 394 6.8E-49 T 13-10-2018 VAA_00504 3f9de309135033026fc98df07a2591b9 510 Pfam PF01926 50S ribosome-binding GTPase 20 134 5.5E-27 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 Pfam PF01926 50S ribosome-binding GTPase 224 341 4.6E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 20 40 5.8E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.8E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 18 477 1.2E-177 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VAA_00504 3f9de309135033026fc98df07a2591b9 510 Gene3D G3DSA:3.40.50.300 16 174 1.2E-41 T 13-10-2018 VAA_00504 3f9de309135033026fc98df07a2591b9 510 Hamap MF_00195 GTPase Der [der]. 17 480 38.75 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VAA_02799 91f376c2bb2db1100dad224575dbfce2 351 SUPERFAMILY SSF111369 43 227 4.84E-13 T 13-10-2018 VAA_02799 91f376c2bb2db1100dad224575dbfce2 351 Gene3D G3DSA:2.40.30.170 234 291 8.9E-35 T 13-10-2018 VAA_02799 91f376c2bb2db1100dad224575dbfce2 351 Gene3D G3DSA:2.40.50.100 43 233 8.9E-35 T 13-10-2018 VAA_02799 91f376c2bb2db1100dad224575dbfce2 351 Gene3D G3DSA:1.10.287.470 77 199 8.9E-35 T 13-10-2018 VAA_02799 91f376c2bb2db1100dad224575dbfce2 351 Pfam PF13533 Biotin-lipoyl like 44 88 9.7E-15 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAA_01177 80e15b12304c9d96ff36040626770a88 213 Pfam PF04391 Protein of unknown function (DUF533) 37 211 3.6E-63 T 13-10-2018 IPR007486 Inner membrane protein YebE VAA_01177 80e15b12304c9d96ff36040626770a88 213 SUPERFAMILY SSF158682 71 211 2.88E-26 T 13-10-2018 IPR029024 TerB-like VAA_01177 80e15b12304c9d96ff36040626770a88 213 Gene3D G3DSA:1.10.3680.10 81 213 3.3E-11 T 13-10-2018 IPR029024 TerB-like VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 Pfam PF00378 Enoyl-CoA hydratase/isomerase 38 286 4.1E-78 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 SUPERFAMILY SSF52096 21 288 3.58E-79 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 130 150 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 22 291 56.227 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 TIGRFAM TIGR01929 menB: naphthoate synthase 29 288 2.8E-146 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 Gene3D G3DSA:3.90.226.10 7 229 6.7E-85 T 13-10-2018 VAA_03315 0656015731a3a8b0f59579fe61a75c81 292 Gene3D G3DSA:1.10.12.10 230 280 6.4E-31 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VAA_02331 c13443950ff4300872f2a11036b181de 284 Gene3D G3DSA:3.40.50.1820 1 277 5.8E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02331 c13443950ff4300872f2a11036b181de 284 SUPERFAMILY SSF53474 11 282 4.47E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02331 c13443950ff4300872f2a11036b181de 284 Pfam PF12697 Alpha/beta hydrolase family 28 275 4.2E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_02331 c13443950ff4300872f2a11036b181de 284 PRINTS PR00412 Epoxide hydrolase signature 114 127 3.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_02331 c13443950ff4300872f2a11036b181de 284 PRINTS PR00412 Epoxide hydrolase signature 54 69 3.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_02331 c13443950ff4300872f2a11036b181de 284 PRINTS PR00412 Epoxide hydrolase signature 32 50 3.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_02331 c13443950ff4300872f2a11036b181de 284 PRINTS PR00412 Epoxide hydrolase signature 100 113 3.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_02331 c13443950ff4300872f2a11036b181de 284 PRINTS PR00412 Epoxide hydrolase signature 258 280 3.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 5.0E-27 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAA_03715 d811635457a8eff1777433fc3f11a862 486 SUPERFAMILY SSF53623 108 323 9.29E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Gene3D G3DSA:3.40.1190.10 111 325 4.1E-85 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Gene3D G3DSA:3.90.190.20 326 483 1.5E-47 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03715 d811635457a8eff1777433fc3f11a862 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 2.1E-186 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_03715 d811635457a8eff1777433fc3f11a862 486 SUPERFAMILY SSF51984 23 109 3.66E-26 T 13-10-2018 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Gene3D G3DSA:3.40.50.720 23 110 1.7E-32 T 13-10-2018 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.236 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Pfam PF08245 Mur ligase middle domain 127 307 8.2E-29 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAA_03715 d811635457a8eff1777433fc3f11a862 486 SUPERFAMILY SSF53244 326 473 1.28E-46 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03715 d811635457a8eff1777433fc3f11a862 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 8.1E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 Gene3D G3DSA:3.40.50.300 1 119 3.7E-28 T 13-10-2018 VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 Pfam PF00005 ABC transporter 4 54 6.6E-10 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 SUPERFAMILY SSF52540 3 141 1.08E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 Pfam PF08402 TOBE domain 182 255 1.7E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 SUPERFAMILY SSF50331 134 263 8.75E-26 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 Gene3D G3DSA:2.40.50.140 188 247 1.9E-32 T 13-10-2018 VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 ProSitePatterns PS00211 ABC transporters family signature. 27 41 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01036 d80f32733eb44f959d67c02cdd89d60e 266 Gene3D G3DSA:2.40.50.940 120 256 1.9E-32 T 13-10-2018 VAA_00205 9c10fbc03743c093c1189a86d1fab8f8 431 SUPERFAMILY SSF51391 204 415 2.62E-56 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAA_00205 9c10fbc03743c093c1189a86d1fab8f8 431 Gene3D G3DSA:3.20.20.70 196 418 4.9E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00205 9c10fbc03743c093c1189a86d1fab8f8 431 Pfam PF02581 Thiamine monophosphate synthase 215 398 8.0E-49 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 Pfam PF00698 Acyl transferase domain 7 298 9.2E-41 T 13-10-2018 IPR014043 Acyl transferase VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 SUPERFAMILY SSF52151 4 305 3.66E-82 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 Gene3D G3DSA:3.30.70.250 125 197 2.3E-107 T 13-10-2018 VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 Gene3D G3DSA:3.40.366.10 5 286 2.3E-107 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 PIRSF PIRSF000446 1 307 5.3E-134 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 7.0E-123 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 SUPERFAMILY SSF55048 130 197 1.83E-17 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VAA_03344 4f161f9caee4c9a6aa0c78ec6cb69fd4 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 1.0E-46 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.4E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.4E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.054 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 Gene3D G3DSA:3.90.79.10 1 159 6.2E-50 T 13-10-2018 VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 Pfam PF00293 NUDIX domain 7 145 6.7E-26 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_00371 300d8b375015fd3464759ce84fbf9f06 172 SUPERFAMILY SSF55811 6 153 3.25E-31 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 2.7E-177 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 SUPERFAMILY SSF48024 22 133 2.62E-38 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 6.7E-114 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 SMART SM00382 220 426 0.006 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 Gene3D G3DSA:1.10.860.10 17 180 2.2E-54 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 Gene3D G3DSA:3.40.50.300 181 460 4.1E-107 T 13-10-2018 VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 SUPERFAMILY SSF52540 201 452 2.4E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00262 8fc1ad0278f0f73629ed7db6e6dda373 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 1.6E-36 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VAA_01242 fb764500b787b21049bc95a541f6866f 299 Pfam PF00892 EamA-like transporter family 3 135 5.7E-20 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_01242 fb764500b787b21049bc95a541f6866f 299 Pfam PF00892 EamA-like transporter family 151 280 2.2E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_01242 fb764500b787b21049bc95a541f6866f 299 SUPERFAMILY SSF103481 187 281 1.96E-8 T 13-10-2018 VAA_01242 fb764500b787b21049bc95a541f6866f 299 SUPERFAMILY SSF103481 36 138 6.28E-12 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 21 41 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 244 263 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 62 82 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 PRINTS PR00173 Glutamate-aspartate symporter signature 161 183 1.5E-54 T 13-10-2018 VAA_02253 9b58060a828935f73baf3b56c64af815 433 Pfam PF00375 Sodium:dicarboxylate symporter family 29 417 2.6E-117 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAA_02253 9b58060a828935f73baf3b56c64af815 433 Gene3D G3DSA:1.10.3860.10 14 433 2.4E-114 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_02253 9b58060a828935f73baf3b56c64af815 433 SUPERFAMILY SSF118215 29 417 4.05E-107 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 SMART SM00028 85 118 16.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 SMART SM00028 251 284 38.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 SMART SM00028 291 324 0.022 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 SMART SM00028 411 444 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 Gene3D G3DSA:1.25.40.10 175 324 8.3E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 Gene3D G3DSA:1.25.40.10 325 493 3.2E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 Gene3D G3DSA:3.30.70.270 519 710 1.9E-5 T 13-10-2018 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 SUPERFAMILY SSF48452 175 360 3.03E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 Pfam PF13424 Tetratricopeptide repeat 251 314 7.8E-8 T 13-10-2018 VAA_04239 4e79585fb9d2fa538fe159d55c18b332 755 SUPERFAMILY SSF48452 330 440 6.83E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03026 d2571634dbeecd5b22a1c25b49bd7786 323 SUPERFAMILY SSF49879 24 122 9.76E-18 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VAA_03026 d2571634dbeecd5b22a1c25b49bd7786 323 Pfam PF00498 FHA domain 37 105 3.6E-12 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VAA_03026 d2571634dbeecd5b22a1c25b49bd7786 323 Gene3D G3DSA:2.60.200.20 8 132 1.4E-15 T 13-10-2018 VAA_03026 d2571634dbeecd5b22a1c25b49bd7786 323 SMART SM00240 35 86 0.0027 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VAA_01907 8283d62e03f8245c6a80afcb89423836 213 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 23 182 27.718 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VAA_01907 8283d62e03f8245c6a80afcb89423836 213 SUPERFAMILY SSF64438 27 183 1.74E-45 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VAA_01907 8283d62e03f8245c6a80afcb89423836 213 Pfam PF03975 CheD chemotactic sensory transduction 81 178 4.4E-31 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VAA_01907 8283d62e03f8245c6a80afcb89423836 213 Gene3D G3DSA:3.30.1330.200 26 188 8.6E-48 T 13-10-2018 IPR038592 CheD-like superfamily VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 Gene3D G3DSA:3.40.50.12780 6 377 2.2E-61 T 13-10-2018 VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 389 452 5.1E-6 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 Gene3D G3DSA:3.30.300.30 379 479 4.7E-15 T 13-10-2018 VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 33 468 4.9E-122 T 13-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 Pfam PF00501 AMP-binding enzyme 13 380 1.3E-48 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_03313 a54f9da9cf044ab89edbd0c335fbac1a 503 SUPERFAMILY SSF56801 10 472 4.58E-82 T 13-10-2018 VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 SUPERFAMILY SSF53187 46 406 2.59E-58 T 13-10-2018 VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 Gene3D G3DSA:3.40.630.10 55 401 4.9E-113 T 13-10-2018 VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 47 404 3.2E-159 T 13-10-2018 IPR010162 Peptidase M20B, peptidase T-like VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 Pfam PF07687 Peptidase dimerisation domain 221 296 3.6E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 Gene3D G3DSA:3.30.70.360 215 326 4.9E-113 T 13-10-2018 VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 Pfam PF01546 Peptidase family M20/M25/M40 112 406 1.9E-20 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VAA_01790 16fa2de4cebcb636668178f7550ac5b4 407 SUPERFAMILY SSF55031 216 328 4.32E-21 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAA_00368 a4f7eed582bc97c904196ad9bd97cb08 267 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 7.0E-84 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAA_00368 a4f7eed582bc97c904196ad9bd97cb08 267 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAA_00368 a4f7eed582bc97c904196ad9bd97cb08 267 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 265 1.9E-94 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAA_00368 a4f7eed582bc97c904196ad9bd97cb08 267 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.494 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 39 651 6.2E-261 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 Gene3D G3DSA:3.80.30.20 381 648 2.4E-13 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 Pfam PF04055 Radical SAM superfamily 386 591 1.8E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 Pfam PF11842 Domain of unknown function (DUF3362) 600 741 3.0E-42 T 13-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 SUPERFAMILY SSF102114 385 657 5.49E-11 T 13-10-2018 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 SMART SM00729 382 632 1.0E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 39 653 48.577 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 386 406 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VAA_02267 ee4208d9404ed7e7891e9fc035d05116 783 Pfam PF08497 Radical SAM N-terminal 39 385 7.1E-141 T 13-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VAA_02942 0b1cfa377bd9ffacdb8abe34ffb9e370 233 Pfam PF00005 ABC transporter 27 175 8.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02942 0b1cfa377bd9ffacdb8abe34ffb9e370 233 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02942 0b1cfa377bd9ffacdb8abe34ffb9e370 233 SMART SM00382 36 223 2.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02942 0b1cfa377bd9ffacdb8abe34ffb9e370 233 Gene3D G3DSA:3.40.50.300 5 231 6.1E-64 T 13-10-2018 VAA_02942 0b1cfa377bd9ffacdb8abe34ffb9e370 233 SUPERFAMILY SSF52540 7 227 1.82E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 SUPERFAMILY SSF161093 276 446 1.83E-46 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 SMART SM00924 34 137 2.0E-12 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 Gene3D G3DSA:3.10.580.10 133 258 1.9E-30 T 13-10-2018 VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 Pfam PF03448 MgtE intracellular N domain 35 134 5.8E-14 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 SUPERFAMILY SSF54631 137 273 7.71E-14 T 13-10-2018 VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 Gene3D G3DSA:1.10.357.20 274 447 8.8E-46 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 Pfam PF01769 Divalent cation transporter 319 440 1.7E-23 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAA_00901 c18be9e66a8be6fb7c070f2bdcf9a88e 448 SUPERFAMILY SSF158791 19 134 6.15E-14 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 50 211 4.5E-54 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SUPERFAMILY SSF47807 212 331 7.92E-32 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SMART SM00475 48 309 2.2E-126 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SMART SM00482 728 935 8.6E-118 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Gene3D G3DSA:1.10.150.20 751 894 1.6E-112 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Gene3D G3DSA:3.40.50.1010 51 325 9.6E-96 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 719 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 742 765 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 821 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 855 866 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 887 903 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 833 844 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 720 735 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 918 931 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 PRINTS PR00868 DNA-polymerase family A (pol I) signature 772 785 2.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SUPERFAMILY SSF56672 564 971 1.45E-156 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SMART SM00279 214 249 7.0E-14 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Gene3D G3DSA:1.10.150.20 215 294 9.6E-96 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SUPERFAMILY SSF53098 374 559 1.64E-54 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SUPERFAMILY SSF88723 48 211 2.94E-57 T 13-10-2018 IPR029060 PIN-like domain superfamily VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Pfam PF00476 DNA polymerase family A 594 968 2.0E-155 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Gene3D G3DSA:3.30.70.370 706 967 1.6E-112 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Gene3D G3DSA:3.30.420.10 368 583 4.2E-70 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 TIGRFAM TIGR00593 pola: DNA polymerase I 51 971 1.8E-289 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 SMART SM00474 371 558 1.7E-40 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Gene3D G3DSA:1.20.1060.10 584 700 4.5E-41 T 13-10-2018 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 ProSitePatterns PS00447 DNA polymerase family A signature. 796 815 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Pfam PF01612 3'-5' exonuclease 371 557 1.6E-40 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VAA_00578 edc7fb1b4aeb77fe2d90d80a344a2f39 971 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 212 311 2.3E-30 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 855 6.1E-294 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 SUPERFAMILY SSF50677 203 411 1.47E-51 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Pfam PF06827 Zinc finger found in FPG and IleRS 913 940 5.2E-6 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Gene3D G3DSA:3.40.50.620 25 638 1.6E-240 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 649 3.4E-216 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 SUPERFAMILY SSF52374 3 656 2.38E-137 T 13-10-2018 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 943 21.435 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Gene3D G3DSA:3.90.740.10 195 416 1.6E-240 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.4E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 570 579 5.4E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 409 424 5.4E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 535 548 5.4E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.4E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 SUPERFAMILY SSF47323 661 943 9.16E-74 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Pfam PF08264 Anticodon-binding domain of tRNA 694 856 9.4E-28 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VAA_00411 2e3c720732dbd99c020107150137a7c5 952 Gene3D G3DSA:1.10.730.20 649 944 3.8E-85 T 13-10-2018 VAA_00818 eec1afe44193f651099b1fd49935f483 723 SUPERFAMILY SSF48179 496 639 2.3E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 712 3.0E-5 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.5E-25 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_00818 eec1afe44193f651099b1fd49935f483 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 207 6.5E-40 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VAA_00818 eec1afe44193f651099b1fd49935f483 723 SUPERFAMILY SSF52096 2 304 3.02E-65 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_00818 eec1afe44193f651099b1fd49935f483 723 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 6.4E-59 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.059 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_00818 eec1afe44193f651099b1fd49935f483 723 SUPERFAMILY SSF51735 315 496 1.18E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00818 eec1afe44193f651099b1fd49935f483 723 Gene3D G3DSA:3.40.50.720 315 497 5.4E-65 T 13-10-2018 VAA_00818 eec1afe44193f651099b1fd49935f483 723 SUPERFAMILY SSF48179 625 715 2.72E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_00818 eec1afe44193f651099b1fd49935f483 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Gene3D G3DSA:1.10.1040.50 498 710 2.0E-73 T 13-10-2018 VAA_00818 eec1afe44193f651099b1fd49935f483 723 Gene3D G3DSA:3.90.226.10 1 312 1.1E-89 T 13-10-2018 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 SMART SM00358 155 223 6.0E-20 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 Gene3D G3DSA:1.10.1520.10 3 148 6.2E-44 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 Gene3D G3DSA:3.30.160.20 149 225 5.2E-19 T 13-10-2018 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 SUPERFAMILY SSF69065 5 158 4.01E-50 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 4.7E-15 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 SUPERFAMILY SSF54768 108 222 1.41E-27 T 13-10-2018 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.687 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 SMART SM00535 20 148 1.3E-54 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 Pfam PF14622 Ribonuclease-III-like 18 141 2.9E-33 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VAA_03775 4d9633d1ebbbf2c1e566342947d25e25 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 1.9E-73 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 461 1.0E-112 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 SUPERFAMILY SSF51735 128 304 2.22E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 SMART SM00846 127 288 5.8E-53 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 Gene3D G3DSA:3.30.360.10 287 452 2.2E-112 T 13-10-2018 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 Gene3D G3DSA:3.40.50.720 129 462 2.2E-112 T 13-10-2018 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 3.6E-43 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 3.7E-21 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 9.8E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 9.8E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 9.8E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 9.8E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02960 4270056ab4b823310343385a7cbf7d1b 480 SUPERFAMILY SSF55347 288 451 8.73E-52 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Gene3D G3DSA:3.40.50.1380 937 1072 4.3E-34 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SUPERFAMILY SSF56059 673 932 7.6E-104 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SUPERFAMILY SSF52440 1 127 1.73E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SMART SM00851 955 1041 1.2E-27 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.081 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SUPERFAMILY SSF52335 936 1071 2.22E-35 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Gene3D G3DSA:1.10.1030.10 404 553 4.3E-50 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.0E-39 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Gene3D G3DSA:3.30.470.20 665 934 3.2E-124 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SUPERFAMILY SSF56059 128 401 3.71E-108 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SUPERFAMILY SSF52440 556 675 2.01E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Gene3D G3DSA:3.30.470.20 119 403 1.5E-128 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.3E-72 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.8E-37 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Gene3D G3DSA:3.40.50.20 554 662 2.1E-49 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SMART SM01096 424 547 4.6E-73 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Pfam PF02142 MGS-like domain 956 1041 1.1E-16 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.369 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 Gene3D G3DSA:3.40.50.20 1 116 8.3E-51 T 13-10-2018 VAA_03703 30995a950da14298f699f3a35fbaf5c4 1076 SUPERFAMILY SSF48108 396 554 3.92E-51 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 22 47 7.1E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 7.1E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 447 7.1E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 SMART SM00283 322 583 2.9E-59 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 SUPERFAMILY SSF58104 275 583 1.22E-67 T 13-10-2018 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 397 550 1.7E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 SMART SM00304 310 360 41.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 SMART SM00304 254 307 0.0062 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02954 8a24f42a6866da1b858a995a8ca10fd3 584 Gene3D G3DSA:1.10.287.950 254 584 3.7E-65 T 13-10-2018 VAA_00271 1eff553aed15410386e26499963bc77c 617 PIRSF PIRSF000207 13 617 6.0E-267 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00271 1eff553aed15410386e26499963bc77c 617 Gene3D G3DSA:3.40.50.80 463 617 6.0E-60 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00271 1eff553aed15410386e26499963bc77c 617 Pfam PF00175 Oxidoreductase NAD-binding domain 475 581 2.5E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 Gene3D G3DSA:1.20.990.10 298 402 1.2E-72 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 Gene3D G3DSA:2.40.30.10 251 457 1.2E-72 T 13-10-2018 VAA_00271 1eff553aed15410386e26499963bc77c 617 SUPERFAMILY SSF52343 462 617 4.45E-51 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00271 1eff553aed15410386e26499963bc77c 617 SUPERFAMILY SSF63380 246 463 1.53E-63 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_00271 1eff553aed15410386e26499963bc77c 617 Pfam PF00667 FAD binding domain 250 441 2.8E-27 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 Pfam PF00258 Flavodoxin 84 208 1.4E-29 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00369 Flavodoxin signature 131 142 1.9E-12 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00369 Flavodoxin signature 187 206 1.9E-12 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00369 Flavodoxin signature 83 96 1.9E-12 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00369 Flavodoxin signature 163 173 1.9E-12 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 22 617 7.9E-252 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00271 1eff553aed15410386e26499963bc77c 617 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 14 617 48.187 T 13-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_00271 1eff553aed15410386e26499963bc77c 617 Gene3D G3DSA:3.40.50.360 72 235 3.4E-49 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00271 1eff553aed15410386e26499963bc77c 617 SUPERFAMILY SSF52218 80 227 2.37E-47 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 543 559 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 437 446 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 499 508 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 288 298 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 566 574 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 512 523 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00271 1eff553aed15410386e26499963bc77c 617 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 474 493 1.2E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_02289 069bfcfcb726da557629d505d49febda 556 SUPERFAMILY SSF50249 342 440 3.36E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02289 069bfcfcb726da557629d505d49febda 556 SMART SM00316 19 87 9.9E-4 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02289 069bfcfcb726da557629d505d49febda 556 SMART SM00316 190 260 1.2E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02289 069bfcfcb726da557629d505d49febda 556 SMART SM00316 449 520 4.0E-20 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02289 069bfcfcb726da557629d505d49febda 556 SMART SM00316 103 171 3.6E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02289 069bfcfcb726da557629d505d49febda 556 SMART SM00316 275 347 8.3E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02289 069bfcfcb726da557629d505d49febda 556 SMART SM00316 362 434 8.8E-21 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02289 069bfcfcb726da557629d505d49febda 556 PIRSF PIRSF002111 1 534 7.9E-217 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VAA_02289 069bfcfcb726da557629d505d49febda 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02289 069bfcfcb726da557629d505d49febda 556 Gene3D G3DSA:2.40.50.140 6 98 1.1E-16 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 Pfam PF00575 S1 RNA binding domain 362 434 1.5E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02289 069bfcfcb726da557629d505d49febda 556 Pfam PF00575 S1 RNA binding domain 189 260 1.9E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02289 069bfcfcb726da557629d505d49febda 556 Pfam PF00575 S1 RNA binding domain 449 520 3.4E-15 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02289 069bfcfcb726da557629d505d49febda 556 Pfam PF00575 S1 RNA binding domain 275 347 7.9E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02289 069bfcfcb726da557629d505d49febda 556 Pfam PF00575 S1 RNA binding domain 103 171 1.3E-8 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02289 069bfcfcb726da557629d505d49febda 556 Pfam PF00575 S1 RNA binding domain 18 86 5.7E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02289 069bfcfcb726da557629d505d49febda 556 SUPERFAMILY SSF50249 88 174 1.79E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02289 069bfcfcb726da557629d505d49febda 556 Gene3D G3DSA:2.40.50.140 99 178 2.1E-5 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 Gene3D G3DSA:2.40.50.140 445 528 1.6E-19 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.2E-229 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VAA_02289 069bfcfcb726da557629d505d49febda 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.8E-97 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 SUPERFAMILY SSF50249 429 538 2.01E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02289 069bfcfcb726da557629d505d49febda 556 SUPERFAMILY SSF50249 255 364 2.5E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02289 069bfcfcb726da557629d505d49febda 556 SUPERFAMILY SSF50249 4 112 8.58E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02289 069bfcfcb726da557629d505d49febda 556 Gene3D G3DSA:2.40.50.140 269 357 2.9E-31 T 13-10-2018 VAA_02289 069bfcfcb726da557629d505d49febda 556 Gene3D G3DSA:2.40.50.140 358 444 1.8E-23 T 13-10-2018 VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 59 164 8.1E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Gene3D G3DSA:3.40.50.300 8 170 1.0E-48 T 13-10-2018 VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 SUPERFAMILY SSF48019 258 440 2.04E-71 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 SUPERFAMILY SSF52540 16 240 1.11E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 SMART SM00382 55 171 1.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Pfam PF12002 MgsA AAA+ ATPase C terminal 274 440 3.1E-66 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Gene3D G3DSA:1.10.3710.10 352 453 4.1E-37 T 13-10-2018 VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Gene3D G3DSA:1.20.272.10 247 351 1.6E-42 T 13-10-2018 VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Pfam PF16193 AAA C-terminal domain 196 273 9.2E-21 T 13-10-2018 IPR032423 AAA C-terminal domain VAA_03233 7c7d5c946c9c317362564c4d4b97ae3c 454 Gene3D G3DSA:1.10.8.60 171 246 2.3E-22 T 13-10-2018 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Gene3D G3DSA:3.40.50.300 115 422 1.5E-113 T 13-10-2018 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 57 203 1.9E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 101 116 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Pfam PF03144 Elongation factor Tu domain 2 357 423 1.5E-7 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 SUPERFAMILY SSF54980 436 511 3.38E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Gene3D G3DSA:3.30.70.3280 433 572 2.4E-52 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Pfam PF16658 Class II release factor RF3, C-terminal domain 430 557 2.5E-46 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VAA_00382 688c27ef2cf88344926a98883cd291c8 572 SUPERFAMILY SSF52540 53 320 6.48E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00382 688c27ef2cf88344926a98883cd291c8 572 PRINTS PR00315 GTP-binding elongation factor signature 180 189 4.4E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 PRINTS PR00315 GTP-binding elongation factor signature 58 71 4.4E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 PRINTS PR00315 GTP-binding elongation factor signature 108 116 4.4E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 PRINTS PR00315 GTP-binding elongation factor signature 128 138 4.4E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 48 572 0.0 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Gene3D G3DSA:3.40.50.300 153 318 1.5E-113 T 13-10-2018 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Pfam PF00009 Elongation factor Tu GTP binding domain 56 320 3.1E-46 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 47 570 51.88 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VAA_00382 688c27ef2cf88344926a98883cd291c8 572 SUPERFAMILY SSF50447 305 436 3.06E-26 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 Gene3D G3DSA:2.40.50.140 47 111 1.3E-29 T 13-10-2018 VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 SMART SM00357 49 112 3.7E-32 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 ProSitePatterns PS00352 'Cold-shock' domain signature. 61 79 - T 13-10-2018 IPR019844 Cold-shock conserved site VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 Pfam PF00313 'Cold-shock' DNA-binding domain 48 111 2.7E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 SUPERFAMILY SSF50249 44 111 3.43E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 PRINTS PR00050 Cold shock protein signature 50 65 1.6E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 PRINTS PR00050 Cold shock protein signature 85 103 1.6E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 PRINTS PR00050 Cold shock protein signature 70 79 1.6E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_00964 fcbf2452abcd5ab3c151b83eb71553ac 112 PIRSF PIRSF002599 43 112 3.5E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SMART SM00388 666 731 5.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 287 490 2.0E-12 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SUPERFAMILY SSF47384 652 732 1.02E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:1.10.287.130 640 729 1.2E-17 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:3.30.565.10 732 889 3.9E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SUPERFAMILY SSF55874 721 887 1.31E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SUPERFAMILY SSF53850 16 258 1.01E-22 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SMART SM00448 964 1080 4.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 886 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:3.40.190.10 40 248 2.2E-28 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SUPERFAMILY SSF47226 1115 1190 1.2E-6 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:3.40.190.10 280 491 1.6E-24 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:3.40.50.2300 945 1081 1.9E-28 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SUPERFAMILY SSF52172 965 1091 3.56E-29 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SUPERFAMILY SSF53850 285 490 4.45E-21 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SMART SM00062 283 493 0.0053 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SMART SM00062 69 268 4.6E-4 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 SMART SM00387 778 889 1.7E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:3.40.190.10 134 224 2.2E-28 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Gene3D G3DSA:3.40.190.10 369 457 1.6E-24 T 13-10-2018 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 70 258 2.3E-18 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 886 6.5E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Pfam PF00072 Response regulator receiver domain 966 1080 1.9E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03253 0918d47e1d13f8d63cf6071da6ba6e56 1197 Pfam PF00512 His Kinase A (phospho-acceptor) domain 667 730 1.1E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03115 85052d3673f0e4950a3b902660992122 610 Pfam PF02151 UvrB/uvrC motif 205 238 3.1E-10 T 13-10-2018 IPR001943 UVR domain GO:0005515 VAA_03115 85052d3673f0e4950a3b902660992122 610 Gene3D G3DSA:1.10.150.20 555 610 1.7E-25 T 13-10-2018 VAA_03115 85052d3673f0e4950a3b902660992122 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 8.6E-13 T 13-10-2018 IPR000305 GIY-YIG endonuclease VAA_03115 85052d3673f0e4950a3b902660992122 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.364 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VAA_03115 85052d3673f0e4950a3b902660992122 610 SMART SM00278 588 607 18.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_03115 85052d3673f0e4950a3b902660992122 610 SMART SM00278 556 575 0.25 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VAA_03115 85052d3673f0e4950a3b902660992122 610 SUPERFAMILY SSF82771 16 100 1.44E-23 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAA_03115 85052d3673f0e4950a3b902660992122 610 SMART SM00465 17 98 3.0E-22 T 13-10-2018 IPR000305 GIY-YIG endonuclease VAA_03115 85052d3673f0e4950a3b902660992122 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 1.5E-212 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VAA_03115 85052d3673f0e4950a3b902660992122 610 SUPERFAMILY SSF46600 190 243 7.59E-14 T 13-10-2018 IPR036876 UVR domain superfamily VAA_03115 85052d3673f0e4950a3b902660992122 610 Gene3D G3DSA:3.40.1440.10 7 102 1.6E-31 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAA_03115 85052d3673f0e4950a3b902660992122 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 1.2E-42 T 13-10-2018 IPR001162 UvrC family homology region VAA_03115 85052d3673f0e4950a3b902660992122 610 SUPERFAMILY SSF47781 521 609 1.24E-19 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_03115 85052d3673f0e4950a3b902660992122 610 Gene3D G3DSA:3.30.420.340 380 552 1.5E-44 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily VAA_03115 85052d3673f0e4950a3b902660992122 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 1.0E-10 T 13-10-2018 VAA_00457 dd8e007ff3803ca93814c9de58d11fcf 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.426 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VAA_00457 dd8e007ff3803ca93814c9de58d11fcf 284 Gene3D G3DSA:1.20.120.1780 167 283 3.3E-10 T 13-10-2018 VAA_00457 dd8e007ff3803ca93814c9de58d11fcf 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.1E-65 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VAA_00457 dd8e007ff3803ca93814c9de58d11fcf 284 Gene3D G3DSA:1.10.357.140 20 166 1.1E-42 T 13-10-2018 VAA_00457 dd8e007ff3803ca93814c9de58d11fcf 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 5.4E-105 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 Pfam PF00593 TonB dependent receptor 266 711 6.1E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 Gene3D G3DSA:2.40.170.20 166 713 3.6E-81 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 3.1E-23 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 1.1E-125 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 Gene3D G3DSA:2.170.130.10 28 156 2.0E-28 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 SUPERFAMILY SSF56935 25 713 2.98E-112 T 13-10-2018 VAA_02922 a653cefd68b3cf5ee99401ed52838d6b 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 8.3E-133 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Gene3D G3DSA:1.10.10.60 405 486 2.8E-12 T 13-10-2018 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 5.1E-27 T 13-10-2018 IPR010518 Flagellar regulatory FleQ VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Gene3D G3DSA:3.40.50.300 125 308 5.3E-66 T 13-10-2018 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 1.2E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Gene3D G3DSA:1.10.8.60 309 385 4.7E-24 T 13-10-2018 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 SMART SM00382 157 304 1.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 SUPERFAMILY SSF46689 349 486 1.79E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 SUPERFAMILY SSF52540 137 378 3.34E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Pfam PF00158 Sigma-54 interaction domain 137 304 3.4E-73 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 6.8E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 6.8E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAA_03462 d12e29ee9039bbe3f245b2526014f72e 488 Gene3D G3DSA:3.40.50.2300 1 117 2.0E-9 T 13-10-2018 VAA_01424 c25b549c3ea4a784f25bfb1fc1d15903 399 Pfam PF04231 Endonuclease I 155 391 3.3E-100 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 VAA_01424 c25b549c3ea4a784f25bfb1fc1d15903 399 SUPERFAMILY SSF54060 153 391 2.59E-51 T 13-10-2018 VAA_03268 d7f3e1a58c264bd0ad8822b00e454e83 782 SUPERFAMILY SSF82866 643 765 4.45E-22 T 13-10-2018 VAA_03268 d7f3e1a58c264bd0ad8822b00e454e83 782 SUPERFAMILY SSF82866 193 403 2.09E-19 T 13-10-2018 VAA_03268 d7f3e1a58c264bd0ad8822b00e454e83 782 Pfam PF03176 MMPL family 202 405 9.5E-12 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 SUPERFAMILY SSF47090 449 521 8.89E-10 T 13-10-2018 IPR036365 PGBD-like superfamily VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 Pfam PF13401 AAA domain 42 171 7.4E-23 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 Pfam PF01471 Putative peptidoglycan binding domain 458 513 1.6E-6 T 13-10-2018 IPR002477 Peptidoglycan binding-like VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 Pfam PF03412 Peptidase C39 family 371 441 1.5E-4 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 Gene3D G3DSA:3.90.70.10 335 452 1.1E-34 T 13-10-2018 VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 Gene3D G3DSA:3.40.50.300 25 184 1.4E-14 T 13-10-2018 VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 SMART SM00382 42 195 7.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 Gene3D G3DSA:1.10.101.10 453 518 3.5E-19 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VAA_03762 9356bed9c95aab535bef54641dcba0b8 532 SUPERFAMILY SSF52540 5 264 8.92E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 13-10-2018 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:3.90.1100.10 647 713 2.3E-21 T 13-10-2018 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.298 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:2.40.270.10 790 832 1.1E-6 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:3.90.1110.10 157 271 6.5E-28 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:3.90.1100.10 417 630 5.6E-69 T 13-10-2018 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 6.9E-23 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:2.40.50.150 833 954 3.0E-44 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 13-10-2018 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 580 3.2E-28 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 5.3E-8 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 2.9E-14 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.8E-157 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:2.40.50.100 714 788 2.7E-32 T 13-10-2018 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:2.40.270.10 1035 1241 7.4E-88 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00351 35b529ecfa9d793c5938187bc468c743 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 13-10-2018 VAA_02220 44d0f392289e2f0e9d5718b1e87af2ef 413 Gene3D G3DSA:3.40.50.1970 1 180 1.0E-46 T 13-10-2018 VAA_02220 44d0f392289e2f0e9d5718b1e87af2ef 413 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.5E-90 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAA_02220 44d0f392289e2f0e9d5718b1e87af2ef 413 SUPERFAMILY SSF56796 1 380 1.96E-88 T 13-10-2018 VAA_02220 44d0f392289e2f0e9d5718b1e87af2ef 413 Gene3D G3DSA:1.20.1090.10 187 382 1.1E-42 T 13-10-2018 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 Gene3D G3DSA:3.40.50.1700 410 662 5.2E-52 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 134 153 3.7E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 180 196 3.7E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 304 322 3.7E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 219 235 3.7E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 PRINTS PR00133 Glycosyl hydrolase family 3 signature 110 126 3.7E-19 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 SUPERFAMILY SSF51445 26 423 9.79E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 Gene3D G3DSA:3.20.20.300 28 407 2.0E-119 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 43 383 2.6E-73 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 SUPERFAMILY SSF52279 424 660 1.19E-33 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VAA_01337 2d8736fcf038f607955e0f6a18c7c416 866 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 424 659 1.9E-21 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 VAA_02530 dcadb763d80d7e3b62d663847986d1c3 351 Pfam PF00571 CBS domain 263 313 1.9E-6 T 13-10-2018 IPR000644 CBS domain VAA_02530 dcadb763d80d7e3b62d663847986d1c3 351 Pfam PF01595 Domain of unknown function DUF21 8 175 8.6E-30 T 13-10-2018 IPR002550 CNNM, transmembrane domain VAA_02530 dcadb763d80d7e3b62d663847986d1c3 351 Gene3D G3DSA:3.10.580.10 186 315 4.9E-34 T 13-10-2018 VAA_02530 dcadb763d80d7e3b62d663847986d1c3 351 SUPERFAMILY SSF54631 181 315 8.79E-23 T 13-10-2018 VAA_03276 dae1be7c0628c67dea391110d73e9ade 287 SUPERFAMILY SSF103481 185 283 7.45E-15 T 13-10-2018 VAA_03276 dae1be7c0628c67dea391110d73e9ade 287 SUPERFAMILY SSF103481 41 140 5.36E-11 T 13-10-2018 VAA_03276 dae1be7c0628c67dea391110d73e9ade 287 Pfam PF00892 EamA-like transporter family 8 137 5.7E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_03276 dae1be7c0628c67dea391110d73e9ade 287 Pfam PF00892 EamA-like transporter family 148 278 5.5E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 370 380 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 Gene3D G3DSA:3.40.50.150 33 383 5.3E-141 T 13-10-2018 VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 Gene3D G3DSA:3.40.1350.30 65 209 5.3E-141 T 13-10-2018 VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 SUPERFAMILY SSF53335 29 387 6.69E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 321 350 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 31 387 1.6E-189 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 24 388 44.408 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VAA_00469 3ce702669dfab3c04d5ac55480ad4d13 389 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 31 387 8.4E-186 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Gene3D G3DSA:3.40.50.12470 557 803 1.1E-171 T 13-10-2018 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Pfam PF00676 Dehydrogenase E1 component 221 517 7.0E-49 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 SUPERFAMILY SSF52518 577 794 4.12E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Gene3D G3DSA:3.40.50.11610 724 930 1.1E-171 T 13-10-2018 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 SMART SM00861 594 787 8.5E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 SUPERFAMILY SSF52518 123 530 1.99E-88 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 PIRSF PIRSF000157 1 935 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 5.9E-14 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Gene3D G3DSA:1.10.287.1150 85 167 1.4E-29 T 13-10-2018 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Gene3D G3DSA:3.40.50.970 168 534 5.6E-146 T 13-10-2018 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 1.0E-51 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VAA_03410 a21e8fdaae2ea4063ae02333ed43b5a1 936 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 3.8E-66 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:3.30.65.10 700 749 1.2E-6 T 13-10-2018 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:3.30.65.10 750 812 6.5E-32 T 13-10-2018 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:2.70.20.10 220 479 1.7E-161 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SMART SM00436 140 228 2.7E-46 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:3.40.50.140 1 170 8.1E-66 T 13-10-2018 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SUPERFAMILY SSF57783 705 747 1.11E-5 T 13-10-2018 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SMART SM00493 3 139 2.6E-30 T 13-10-2018 IPR006171 TOPRIM domain VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:1.10.460.10 172 577 1.7E-161 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 2.4E-247 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SUPERFAMILY SSF57783 814 870 1.24E-20 T 13-10-2018 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SUPERFAMILY SSF56712 3 615 3.66E-197 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 7.8E-5 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 749 7.2E-9 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SMART SM00437 279 533 2.3E-116 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:1.10.290.10 287 411 1.7E-161 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.241 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Pfam PF01751 Toprim domain 5 149 3.2E-31 T 13-10-2018 IPR006171 TOPRIM domain VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 6.0E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 6.0E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 6.0E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 6.0E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 6.0E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 SUPERFAMILY SSF57783 750 812 1.62E-19 T 13-10-2018 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Pfam PF01131 DNA topoisomerase 164 571 1.2E-126 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 831 868 2.7E-16 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 5.8E-11 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VAA_02178 969975d37d1b4cfb47bdc9755e42003a 876 Gene3D G3DSA:2.20.25.10 813 870 1.1E-24 T 13-10-2018 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Gene3D G3DSA:3.40.50.720 14 151 8.2E-52 T 13-10-2018 VAA_01772 620a9b146ff0546677938255a63d9e82 470 SUPERFAMILY SSF116726 148 235 1.57E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Pfam PF02254 TrkA-N domain 247 362 1.1E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Pfam PF02254 TrkA-N domain 15 127 5.2E-30 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Pfam PF02080 TrkA-C domain 403 461 6.6E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Pfam PF02080 TrkA-C domain 168 237 4.4E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Gene3D G3DSA:3.30.70.1450 152 244 1.2E-21 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_01772 620a9b146ff0546677938255a63d9e82 470 Gene3D G3DSA:3.30.70.1450 379 470 1.3E-27 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_01772 620a9b146ff0546677938255a63d9e82 470 SUPERFAMILY SSF51735 244 388 4.94E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01772 620a9b146ff0546677938255a63d9e82 470 SUPERFAMILY SSF51735 12 163 4.05E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01772 620a9b146ff0546677938255a63d9e82 470 Gene3D G3DSA:3.40.50.720 245 378 1.3E-37 T 13-10-2018 VAA_01772 620a9b146ff0546677938255a63d9e82 470 SUPERFAMILY SSF116726 402 449 7.98E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_01772 620a9b146ff0546677938255a63d9e82 470 PRINTS PR00335 TrkA potassium uptake protein signature 85 99 7.2E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_01772 620a9b146ff0546677938255a63d9e82 470 PRINTS PR00335 TrkA potassium uptake protein signature 31 45 7.2E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_01772 620a9b146ff0546677938255a63d9e82 470 PRINTS PR00335 TrkA potassium uptake protein signature 72 82 7.2E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_01772 620a9b146ff0546677938255a63d9e82 470 PRINTS PR00335 TrkA potassium uptake protein signature 14 28 7.2E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_01772 620a9b146ff0546677938255a63d9e82 470 PRINTS PR00335 TrkA potassium uptake protein signature 61 71 7.2E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 SUPERFAMILY SSF53850 106 320 1.3E-46 T 13-10-2018 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 9.1E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 Pfam PF03466 LysR substrate binding domain 110 321 1.3E-29 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 Gene3D G3DSA:1.10.10.10 15 104 5.8E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 Gene3D G3DSA:3.40.190.10 106 319 1.5E-58 T 13-10-2018 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 8.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 8.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 Gene3D G3DSA:3.40.190.10 196 294 1.5E-58 T 13-10-2018 VAA_00211 ca7d4d53207058f5e8886cd6789630e2 327 SUPERFAMILY SSF46785 21 101 2.63E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 Pfam PF03144 Elongation factor Tu domain 2 321 388 3.2E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 SUPERFAMILY SSF52540 3 277 9.61E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 SUPERFAMILY SSF54980 401 478 1.87E-20 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 Gene3D G3DSA:3.40.50.300 1 289 2.7E-102 T 13-10-2018 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 Gene3D G3DSA:2.40.30.10 290 402 2.1E-38 T 13-10-2018 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 SUPERFAMILY SSF50447 261 399 2.12E-33 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 Gene3D G3DSA:3.30.70.870 403 480 1.3E-25 T 13-10-2018 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 480 1.1E-207 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.8E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 Pfam PF14492 Elongation Factor G, domain II 401 474 2.0E-27 T 13-10-2018 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 Pfam PF00009 Elongation factor Tu GTP binding domain 6 277 2.5E-60 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 PRINTS PR00315 GTP-binding elongation factor signature 91 102 2.4E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.4E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 PRINTS PR00315 GTP-binding elongation factor signature 127 136 2.4E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.4E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_03662 b08469e75896d3b20b4a7115e29d98e3 481 PRINTS PR00315 GTP-binding elongation factor signature 75 85 2.4E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:1.10.132.30 638 790 2.7E-65 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.944 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:2.40.50.100 1151 1214 1.1E-62 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.7E-87 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.2E-19 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:2.40.50.100 1022 1126 5.3E-30 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.1E-27 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 SUPERFAMILY SSF64484 16 1362 0.0 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:2.40.50.100 948 1021 5.7E-24 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 2.8E-77 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 1.1E-62 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:1.10.40.90 374 416 4.1E-22 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 SMART SM00663 235 514 8.5E-185 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:1.10.274.100 490 637 8.2E-35 T 13-10-2018 VAA_00350 63652112d608be7da3997752f135f13b 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 6.4E-8 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 388 485 1.2E-27 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00350 63652112d608be7da3997752f135f13b 1400 Gene3D G3DSA:1.10.150.390 1315 1377 8.9E-29 T 13-10-2018 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Gene3D G3DSA:3.30.230.10 489 693 2.3E-92 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Gene3D G3DSA:3.40.50.300 1 298 3.3E-117 T 13-10-2018 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Pfam PF14492 Elongation Factor G, domain II 409 483 1.3E-33 T 13-10-2018 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SUPERFAMILY SSF54980 608 695 2.83E-30 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SMART SM00889 485 603 1.9E-76 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Gene3D G3DSA:2.40.30.10 299 405 4.1E-48 T 13-10-2018 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Pfam PF00679 Elongation factor G C-terminus 605 691 1.8E-31 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.607 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SUPERFAMILY SSF50447 271 409 2.21E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 4.8E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.6E-35 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Gene3D G3DSA:3.30.70.870 410 488 4.1E-32 T 13-10-2018 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Pfam PF03764 Elongation factor G, domain IV 484 603 5.3E-49 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.0E-67 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SUPERFAMILY SSF54211 484 604 3.54E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SMART SM00838 605 693 1.9E-59 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SUPERFAMILY SSF54980 407 485 8.99E-25 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 Gene3D G3DSA:3.30.70.240 609 680 2.3E-92 T 13-10-2018 VAA_00132 ec8249aa70b28a46f19fc4a459e51ead 698 SUPERFAMILY SSF52540 6 288 1.12E-107 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02295 1635cf576770af3aa96494593eec9501 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 2.1E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02295 1635cf576770af3aa96494593eec9501 783 Gene3D G3DSA:1.10.8.60 490 583 2.2E-31 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 PIRSF PIRSF001174 1 774 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VAA_02295 1635cf576770af3aa96494593eec9501 783 SUPERFAMILY SSF88697 10 200 6.71E-48 T 13-10-2018 IPR015947 PUA-like superfamily VAA_02295 1635cf576770af3aa96494593eec9501 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.3E-41 T 13-10-2018 IPR003111 Lon, substrate-binding domain VAA_02295 1635cf576770af3aa96494593eec9501 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VAA_02295 1635cf576770af3aa96494593eec9501 783 Gene3D G3DSA:3.30.230.10 584 771 2.8E-85 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_02295 1635cf576770af3aa96494593eec9501 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 771 7.3E-97 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VAA_02295 1635cf576770af3aa96494593eec9501 783 SUPERFAMILY SSF54211 594 769 1.25E-58 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02295 1635cf576770af3aa96494593eec9501 783 Gene3D G3DSA:3.40.50.300 312 489 3.8E-60 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 9.5E-304 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VAA_02295 1635cf576770af3aa96494593eec9501 783 Gene3D G3DSA:1.20.58.1480 119 244 2.1E-44 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 SMART SM00464 10 201 9.2E-76 T 13-10-2018 IPR003111 Lon, substrate-binding domain VAA_02295 1635cf576770af3aa96494593eec9501 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.261 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VAA_02295 1635cf576770af3aa96494593eec9501 783 Gene3D G3DSA:2.30.130.40 1 116 2.8E-36 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 6.5E-56 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 6.5E-56 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 6.5E-56 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 6.5E-56 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 6.5E-56 T 13-10-2018 VAA_02295 1635cf576770af3aa96494593eec9501 783 SUPERFAMILY SSF52540 312 584 6.27E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02295 1635cf576770af3aa96494593eec9501 783 SMART SM00382 347 491 4.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Gene3D G3DSA:3.30.56.10 401 475 3.3E-26 T 13-10-2018 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Pfam PF01588 Putative tRNA binding domain 45 145 3.6E-26 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Gene3D G3DSA:3.30.56.10 7 179 1.6E-69 T 13-10-2018 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.8E-28 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Gene3D G3DSA:3.50.40.10 197 395 3.9E-81 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Pfam PF03483 B3/4 domain 212 385 3.1E-69 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Gene3D G3DSA:3.30.70.380 702 795 4.0E-29 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.8E-18 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SMART SM00896 701 794 1.9E-44 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SUPERFAMILY SSF50249 39 197 6.37E-48 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.648 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SMART SM00874 403 471 7.3E-30 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SUPERFAMILY SSF54991 697 794 1.22E-29 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Gene3D G3DSA:3.30.930.10 485 690 3.1E-62 T 13-10-2018 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SMART SM00873 212 385 1.2E-96 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SUPERFAMILY SSF46955 403 475 7.32E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.2E-277 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 Gene3D G3DSA:2.40.50.140 39 154 1.6E-69 T 13-10-2018 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SUPERFAMILY SSF55681 467 688 1.39E-52 T 13-10-2018 VAA_03107 34cdba9eb19947582b5d749842e0c30c 795 SUPERFAMILY SSF56037 197 394 3.92E-75 T 13-10-2018 VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 SUPERFAMILY SSF53686 1 424 3.01E-131 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 Gene3D G3DSA:3.40.50.1100 101 399 2.1E-136 T 13-10-2018 VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.5E-8 T 13-10-2018 IPR029144 Threonine synthase, N-terminal VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 391 1.3E-114 T 13-10-2018 IPR004450 Threonine synthase-like VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 Gene3D G3DSA:3.90.1380.10 1 79 1.4E-31 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 Gene3D G3DSA:3.40.50.1100 83 392 2.1E-136 T 13-10-2018 VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 367 4.5E-25 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAA_03682 b3aa3c019fed09834b2b84005ea0bc21 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VAA_01674 862d226dcab39944c74cc88a2816e317 268 SUPERFAMILY SSF53335 8 265 1.33E-79 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01674 862d226dcab39944c74cc88a2816e317 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.796 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VAA_01674 862d226dcab39944c74cc88a2816e317 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 2.3E-86 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VAA_01674 862d226dcab39944c74cc88a2816e317 268 SMART SM00650 25 197 1.9E-88 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VAA_01674 862d226dcab39944c74cc88a2816e317 268 Gene3D G3DSA:3.40.50.150 1 198 6.5E-65 T 13-10-2018 VAA_01674 862d226dcab39944c74cc88a2816e317 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 7.8E-76 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VAA_01674 862d226dcab39944c74cc88a2816e317 268 Gene3D G3DSA:1.10.8.100 200 266 1.1E-23 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VAA_01674 862d226dcab39944c74cc88a2816e317 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VAA_00412 8114fa9636db0565a093faef55670980 173 TIGRFAM TIGR00077 lspA: signal peptidase II 14 168 1.1E-47 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_00412 8114fa9636db0565a093faef55670980 173 Pfam PF01252 Signal peptidase (SPase) II 23 165 3.9E-38 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_00412 8114fa9636db0565a093faef55670980 173 ProSitePatterns PS00855 Signal peptidases II signature. 113 125 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_00412 8114fa9636db0565a093faef55670980 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 110 125 2.1E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_00412 8114fa9636db0565a093faef55670980 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 62 70 2.1E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_00412 8114fa9636db0565a093faef55670980 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 146 162 2.1E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_00412 8114fa9636db0565a093faef55670980 173 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 14 171 16.9 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 Pfam PF01676 Metalloenzyme superfamily 6 401 3.6E-44 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 SUPERFAMILY SSF53649 5 410 3.01E-69 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 SUPERFAMILY SSF143856 122 238 2.22E-47 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 PIRSF PIRSF001491 4 411 2.0E-161 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 TIGRFAM TIGR01696 deoB: phosphopentomutase 7 407 6.5E-178 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 Gene3D G3DSA:3.40.720.10 7 410 2.7E-148 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 Hamap MF_00740 Phosphopentomutase [deoB]. 5 410 53.704 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_03669 4aa3e71fdbf272ccbcdbaad5125be88e 411 Gene3D G3DSA:3.30.70.1250 120 241 2.7E-148 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.9E-261 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 6.4E-61 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 1.2E-125 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VAA_03375 b565692e83fe2a0ae773e336862f154f 651 Pfam PF01578 Cytochrome C assembly protein 89 297 2.5E-54 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03375 b565692e83fe2a0ae773e336862f154f 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.7E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_01633 867c1f336581bb119bfc5946fadfaf4f 553 PIRSF PIRSF038984 14 549 2.5E-237 T 13-10-2018 IPR028348 FAD dependent protein VAA_01633 867c1f336581bb119bfc5946fadfaf4f 553 Gene3D G3DSA:3.50.50.60 99 321 2.7E-89 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01633 867c1f336581bb119bfc5946fadfaf4f 553 Gene3D G3DSA:3.50.50.60 483 547 1.1E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01633 867c1f336581bb119bfc5946fadfaf4f 553 SUPERFAMILY SSF51905 114 542 1.3E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01633 867c1f336581bb119bfc5946fadfaf4f 553 Gene3D G3DSA:3.30.70.2700 6 94 1.6E-30 T 13-10-2018 VAA_01633 867c1f336581bb119bfc5946fadfaf4f 553 Pfam PF01593 Flavin containing amine oxidoreductase 228 280 1.7E-4 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Gene3D G3DSA:1.20.970.10 18 206 6.7E-127 T 13-10-2018 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 13 437 3.4E-211 T 13-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Gene3D G3DSA:3.90.1170.30 348 442 6.7E-30 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 SMART SM00941 361 435 3.2E-29 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Pfam PF02885 Glycosyl transferase family, helical bundle domain 17 78 1.1E-19 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 SUPERFAMILY SSF52418 83 345 3.66E-88 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Gene3D G3DSA:3.40.1030.10 81 333 6.7E-127 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 SUPERFAMILY SSF47648 15 81 5.76E-21 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 16 434 8.9E-159 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 PIRSF PIRSF000478 12 449 6.1E-148 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 361 434 2.4E-24 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Hamap MF_01628 Thymidine phosphorylase [deoA]. 13 448 45.101 T 13-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 Pfam PF00591 Glycosyl transferase family, a/b domain 91 320 1.3E-47 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 SUPERFAMILY SSF54680 349 447 5.36E-28 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_03670 0f5863334b5c5c15d850a301163da92a 453 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 124 139 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 Gene3D G3DSA:1.10.10.10 6 93 8.4E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 Gene3D G3DSA:3.40.190.10 163 269 6.0E-36 T 13-10-2018 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 SUPERFAMILY SSF46785 6 113 1.44E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.9E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 Gene3D G3DSA:3.40.190.10 102 296 6.0E-36 T 13-10-2018 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 SUPERFAMILY SSF53850 91 299 3.8E-25 T 13-10-2018 VAA_01264 143fd0e82e629cbba4a473ccc6ee2e5a 302 Pfam PF03466 LysR substrate binding domain 89 299 3.0E-25 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 SUPERFAMILY SSF51246 331 444 8.37E-43 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.8E-43 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 SUPERFAMILY SSF56059 83 348 5.66E-70 T 13-10-2018 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 Gene3D G3DSA:3.40.50.20 1 85 1.6E-33 T 13-10-2018 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.9E-38 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 SUPERFAMILY SSF52440 1 113 1.65E-45 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 SMART SM00878 336 441 7.2E-64 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.1E-82 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 3.5E-243 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 Gene3D G3DSA:3.30.470.20 86 433 3.2E-156 T 13-10-2018 VAA_02544 8195f9f7e359f217d9c3e0dc7d6e5f55 448 Gene3D G3DSA:3.30.1490.20 131 203 3.2E-156 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_00815 f1e85c5f1bdda35ed9c60af2aadbbe1b 175 Gene3D G3DSA:3.40.50.360 1 156 7.8E-12 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00815 f1e85c5f1bdda35ed9c60af2aadbbe1b 175 Pfam PF12724 Flavodoxin domain 5 153 5.0E-49 T 13-10-2018 IPR026816 Flavodoxin domain VAA_00815 f1e85c5f1bdda35ed9c60af2aadbbe1b 175 SUPERFAMILY SSF52218 3 158 6.55E-27 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00098 d99faf1daa3e47cd14e6185ef9c95b7c 79 Gene3D G3DSA:3.40.190.10 47 74 8.0E-12 T 13-10-2018 VAA_00098 d99faf1daa3e47cd14e6185ef9c95b7c 79 Gene3D G3DSA:3.40.190.10 11 46 8.0E-12 T 13-10-2018 VAA_00098 d99faf1daa3e47cd14e6185ef9c95b7c 79 SUPERFAMILY SSF53850 11 76 2.5E-9 T 13-10-2018 VAA_03472 fc2d3c86386027196f1928b63d9fe2d9 300 Pfam PF04261 Dyp-type peroxidase family 5 293 3.9E-89 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VAA_03472 fc2d3c86386027196f1928b63d9fe2d9 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 2.4E-85 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VAA_03472 fc2d3c86386027196f1928b63d9fe2d9 300 SUPERFAMILY SSF54909 1 297 2.32E-94 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:3.30.2090.10 698 786 1.4E-282 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82693 553 650 1.92E-18 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82693 41 130 1.78E-23 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:1.20.1640.10 10 500 1.4E-282 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82866 290 489 3.27E-46 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82866 782 1008 4.32E-47 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:3.30.70.1430 40 794 1.4E-282 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:3.30.70.1430 555 647 1.4E-282 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:1.20.1640.10 501 1001 1.4E-282 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 5.9E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82714 701 783 3.27E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:3.30.2090.10 178 268 1.4E-282 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82714 182 263 1.28E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.1E-271 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:3.30.70.1440 648 843 1.4E-282 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 Gene3D G3DSA:3.30.70.1320 134 325 1.4E-282 T 13-10-2018 VAA_00588 4450173c93156190a0e1088d432cbaed 1040 SUPERFAMILY SSF82693 136 323 3.84E-20 T 13-10-2018 VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 SUPERFAMILY SSF53901 1 251 5.11E-68 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 Gene3D G3DSA:3.40.47.10 258 401 3.1E-52 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.1E-45 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.5E-28 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 Gene3D G3DSA:3.40.47.10 1 253 3.7E-68 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 SUPERFAMILY SSF53901 213 401 4.03E-63 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03432 fbea20585d8bd3712d0fe3a21a35f2c0 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.4E-15 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VAA_01882 4180f3f33427a7a691d3dc8786ed7d5e 296 SUPERFAMILY SSF51621 80 273 1.71E-35 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_01882 4180f3f33427a7a691d3dc8786ed7d5e 296 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 83 280 6.6E-21 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VAA_01882 4180f3f33427a7a691d3dc8786ed7d5e 296 Gene3D G3DSA:3.20.20.60 4 294 9.3E-41 T 13-10-2018 VAA_02811 9d4ebf17719f53813b2c9f94b7dd6aae 300 Gene3D G3DSA:1.10.3720.10 21 284 2.8E-36 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02811 9d4ebf17719f53813b2c9f94b7dd6aae 300 SUPERFAMILY SSF161098 22 293 2.09E-42 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02811 9d4ebf17719f53813b2c9f94b7dd6aae 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 286 3.3E-9 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 SUPERFAMILY SSF51735 103 290 4.88E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 Gene3D G3DSA:3.40.50.720 99 288 6.4E-109 T 13-10-2018 VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 Gene3D G3DSA:3.40.50.720 28 317 6.4E-109 T 13-10-2018 VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 3.6E-55 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 SUPERFAMILY SSF52283 4 139 5.48E-31 T 13-10-2018 VAA_02769 b4e6d5ceb92c045d22e47459942b1a58 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 318 1.7E-22 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 Gene3D G3DSA:3.90.180.10 17 337 1.1E-129 T 13-10-2018 VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 SMART SM00829 19 337 2.0E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 1.2E-41 T 13-10-2018 VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 Gene3D G3DSA:3.40.50.720 128 309 1.1E-129 T 13-10-2018 VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 SUPERFAMILY SSF50129 5 144 1.91E-43 T 13-10-2018 IPR011032 GroES-like superfamily VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 Pfam PF00107 Zinc-binding dehydrogenase 159 293 5.2E-22 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VAA_02822 dfd5518a04c21cb20a7ec225f84f882c 343 SUPERFAMILY SSF51735 125 304 2.37E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00527 d914f3c44f5ac82c310877001a81c07d 373 SUPERFAMILY SSF111337 24 368 7.06E-140 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAA_00527 d914f3c44f5ac82c310877001a81c07d 373 Gene3D G3DSA:2.40.10.240 87 186 7.9E-118 T 13-10-2018 VAA_00527 d914f3c44f5ac82c310877001a81c07d 373 Pfam PF02547 Queuosine biosynthesis protein 26 368 2.6E-134 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAA_00527 d914f3c44f5ac82c310877001a81c07d 373 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 24 369 2.2E-157 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAA_00527 d914f3c44f5ac82c310877001a81c07d 373 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 24 369 47.374 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VAA_00527 d914f3c44f5ac82c310877001a81c07d 373 Gene3D G3DSA:3.40.1780.10 37 368 7.9E-118 T 13-10-2018 VAA_03544 6309c4e99ef550d918bea8148594d955 213 Gene3D G3DSA:3.40.50.170 3 213 2.2E-82 T 13-10-2018 VAA_03544 6309c4e99ef550d918bea8148594d955 213 Pfam PF00551 Formyl transferase 3 181 2.5E-60 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_03544 6309c4e99ef550d918bea8148594d955 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 2.8E-74 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VAA_03544 6309c4e99ef550d918bea8148594d955 213 SUPERFAMILY SSF53328 4 200 1.3E-63 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_03544 6309c4e99ef550d918bea8148594d955 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_03544 6309c4e99ef550d918bea8148594d955 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.589 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VAA_00895 18d3ee661db6849079b23b662649207e 395 SUPERFAMILY SSF54631 276 392 8.72E-16 T 13-10-2018 VAA_00895 18d3ee661db6849079b23b662649207e 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00895 18d3ee661db6849079b23b662649207e 395 Gene3D G3DSA:3.40.50.300 4 299 2.3E-80 T 13-10-2018 VAA_00895 18d3ee661db6849079b23b662649207e 395 Gene3D G3DSA:3.10.580.10 300 395 4.1E-7 T 13-10-2018 VAA_00895 18d3ee661db6849079b23b662649207e 395 Pfam PF00005 ABC transporter 44 192 5.3E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00895 18d3ee661db6849079b23b662649207e 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 2.4E-153 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VAA_00895 18d3ee661db6849079b23b662649207e 395 SMART SM00116 286 334 3.9 T 13-10-2018 IPR000644 CBS domain VAA_00895 18d3ee661db6849079b23b662649207e 395 SMART SM00116 346 393 0.012 T 13-10-2018 IPR000644 CBS domain VAA_00895 18d3ee661db6849079b23b662649207e 395 SMART SM00382 53 243 4.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00895 18d3ee661db6849079b23b662649207e 395 SUPERFAMILY SSF52540 37 271 7.55E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00895 18d3ee661db6849079b23b662649207e 395 Pfam PF00571 CBS domain 345 392 4.4E-8 T 13-10-2018 IPR000644 CBS domain VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 8.0E-10 T 13-10-2018 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 8.0E-10 T 13-10-2018 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 Gene3D G3DSA:3.20.20.70 1 368 4.9E-120 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 626 3.0E-23 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 SUPERFAMILY SSF51395 2 361 3.67E-106 T 13-10-2018 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 Gene3D G3DSA:3.40.50.720 374 661 3.0E-103 T 13-10-2018 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 SUPERFAMILY SSF51971 332 516 5.49E-40 T 13-10-2018 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 SUPERFAMILY SSF51905 372 625 1.5E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 328 2.5E-81 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VAA_02338 b8a6d15fef5b320038b907d505129ee4 667 Gene3D G3DSA:3.50.50.60 468 620 3.0E-103 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01157 dae66370ac03a3eff5a877374f31a869 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.865 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VAA_01157 dae66370ac03a3eff5a877374f31a869 363 Pfam PF01728 FtsJ-like methyltransferase 188 280 3.2E-6 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VAA_01157 dae66370ac03a3eff5a877374f31a869 363 Gene3D G3DSA:3.30.2300.20 80 177 5.3E-40 T 13-10-2018 VAA_01157 dae66370ac03a3eff5a877374f31a869 363 PIRSF PIRSF028774 1 362 1.5E-189 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VAA_01157 dae66370ac03a3eff5a877374f31a869 363 Gene3D G3DSA:3.30.70.2810 1 78 4.2E-32 T 13-10-2018 VAA_01157 dae66370ac03a3eff5a877374f31a869 363 Gene3D G3DSA:3.40.50.150 178 358 2.0E-54 T 13-10-2018 VAA_01157 dae66370ac03a3eff5a877374f31a869 363 SUPERFAMILY SSF53335 186 281 9.0E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02045 ce0a2844a43b6ad7968891dab5f9116b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02045 ce0a2844a43b6ad7968891dab5f9116b 310 Gene3D G3DSA:3.40.190.290 91 302 8.7E-60 T 13-10-2018 VAA_02045 ce0a2844a43b6ad7968891dab5f9116b 310 SUPERFAMILY SSF53850 90 304 1.61E-38 T 13-10-2018 VAA_02045 ce0a2844a43b6ad7968891dab5f9116b 310 Gene3D G3DSA:1.10.10.10 3 89 1.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02045 ce0a2844a43b6ad7968891dab5f9116b 310 Pfam PF03466 LysR substrate binding domain 89 299 2.2E-40 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02045 ce0a2844a43b6ad7968891dab5f9116b 310 SUPERFAMILY SSF46785 7 112 2.49E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.7E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 Gene3D G3DSA:1.10.357.10 7 214 1.2E-57 T 13-10-2018 VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 SUPERFAMILY SSF48498 86 213 2.45E-41 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_03138 c51010d8edff128ccc2b27f78f85bb9d 214 SUPERFAMILY SSF46689 8 84 9.75E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 SMART SM00283 361 622 1.3E-75 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 Pfam PF02743 Cache domain 47 254 4.6E-30 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 Pfam PF00672 HAMP domain 294 342 4.0E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 589 5.1E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 SUPERFAMILY SSF58104 314 621 5.75E-74 T 13-10-2018 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 Gene3D G3DSA:3.30.450.20 49 265 8.9E-73 T 13-10-2018 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 SMART SM00304 292 346 1.6E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 SMART SM00304 374 441 59.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 Gene3D G3DSA:1.10.287.950 292 623 3.8E-68 T 13-10-2018 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 488 517 5.1E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 5.1E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 459 486 5.1E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 Gene3D G3DSA:3.30.450.20 62 173 8.9E-73 T 13-10-2018 VAA_03486 8ea47b2748efd94927d46f7cbfc7f558 623 SUPERFAMILY SSF103190 55 184 1.05E-18 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_01724 c2c82bd90ab85d182fc1e73461d73b1c 199 Pfam PF07963 Prokaryotic N-terminal methylation motif 21 42 1.9E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01724 c2c82bd90ab85d182fc1e73461d73b1c 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 3.4E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01724 c2c82bd90ab85d182fc1e73461d73b1c 199 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_03089 ce40dee9620be1aae339156f09736448 702 Gene3D G3DSA:3.40.50.300 450 702 7.3E-89 T 13-10-2018 VAA_03089 ce40dee9620be1aae339156f09736448 702 Gene3D G3DSA:1.20.1560.10 130 444 1.3E-67 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_03089 ce40dee9620be1aae339156f09736448 702 Pfam PF00664 ABC transporter transmembrane region 146 409 1.3E-48 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_03089 ce40dee9620be1aae339156f09736448 702 ProSitePatterns PS00211 ABC transporters family signature. 594 608 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03089 ce40dee9620be1aae339156f09736448 702 SMART SM00382 482 668 1.2E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03089 ce40dee9620be1aae339156f09736448 702 Pfam PF00005 ABC transporter 474 622 1.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03089 ce40dee9620be1aae339156f09736448 702 SUPERFAMILY SSF90123 130 442 1.03E-63 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_03089 ce40dee9620be1aae339156f09736448 702 Gene3D G3DSA:3.90.70.10 29 129 2.1E-8 T 13-10-2018 VAA_03089 ce40dee9620be1aae339156f09736448 702 SUPERFAMILY SSF52540 447 692 2.07E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03089 ce40dee9620be1aae339156f09736448 702 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 55 692 3.8E-232 T 13-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 Gene3D G3DSA:3.30.420.150 93 270 1.6E-74 T 13-10-2018 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 SUPERFAMILY SSF109604 288 473 4.39E-43 T 13-10-2018 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 Gene3D G3DSA:3.30.420.40 1 278 1.6E-74 T 13-10-2018 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 PIRSF PIRSF001267 1 475 2.2E-168 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 474 49.191 T 13-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 SUPERFAMILY SSF53067 114 283 6.85E-43 T 13-10-2018 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 Pfam PF02541 Ppx/GppA phosphatase family 2 282 5.1E-87 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 SUPERFAMILY SSF53067 1 108 4.73E-27 T 13-10-2018 VAA_00616 d33bff2a956ca0ad2b31bcbc8c6a3ea7 476 Gene3D G3DSA:1.10.3210.10 285 476 9.4E-49 T 13-10-2018 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 13-10-2018 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 1.3E-66 T 13-10-2018 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 Gene3D G3DSA:3.30.1240.10 90 197 7.1E-73 T 13-10-2018 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 13-10-2018 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 SUPERFAMILY SSF56784 9 274 4.14E-69 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 2.2E-32 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 5.4E-62 T 13-10-2018 IPR000150 Cof family GO:0016787 VAA_01962 c9643973ff0067bdaa89854ddb0cacdd 275 Gene3D G3DSA:3.40.50.1000 13 266 7.1E-73 T 13-10-2018 IPR023214 HAD superfamily VAA_03616 b779277a107d122ab58e497c02578f6d 450 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 5 450 46.125 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VAA_03616 b779277a107d122ab58e497c02578f6d 450 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 5 260 3.5E-113 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VAA_03616 b779277a107d122ab58e497c02578f6d 450 Pfam PF11973 NQRA C-terminal domain 265 313 5.6E-21 T 13-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VAA_03616 b779277a107d122ab58e497c02578f6d 450 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 6 450 1.2E-202 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VAA_1488 61c6f4adbc4dab99c26627467ad312d0 100 Gene3D G3DSA:1.10.1370.30 14 100 3.6E-32 T 13-10-2018 VAA_1488 61c6f4adbc4dab99c26627467ad312d0 100 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 15 99 8.8E-14 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_1488 61c6f4adbc4dab99c26627467ad312d0 100 SUPERFAMILY SSF55486 10 100 3.17E-18 T 13-10-2018 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Pfam PF00270 DEAD/DEAH box helicase 7 160 1.2E-7 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 819 0.0 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Pfam PF00271 Helicase conserved C-terminal domain 208 326 1.0E-12 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Pfam PF04408 Helicase associated domain (HA2) 388 476 1.6E-8 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 PIRSF PIRSF005496 1 821 0.0 T 13-10-2018 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 SMART SM00487 4 186 2.1E-8 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Gene3D G3DSA:3.40.50.300 180 345 5.5E-51 T 13-10-2018 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 SMART SM00847 387 477 8.8E-7 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Gene3D G3DSA:1.20.120.1080 373 476 2.5E-9 T 13-10-2018 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Pfam PF08482 ATP-dependent helicase C-terminal 675 807 5.2E-52 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 SMART SM00490 226 327 2.4E-14 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 Gene3D G3DSA:3.40.50.300 1 179 3.8E-50 T 13-10-2018 VAA_00758 1c7110b142a90d0f62d4592214c61b24 822 SUPERFAMILY SSF52540 19 471 6.38E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01017 625456e8d9c217ea2e73a9ac6bc45456 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 1.5E-27 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VAA_01017 625456e8d9c217ea2e73a9ac6bc45456 427 Pfam PF02687 FtsX-like permease family 322 420 1.2E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_02029 4141404a1d5abd5cd8de001f991129da 319 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 35 303 4.1E-80 T 13-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VAA_02029 4141404a1d5abd5cd8de001f991129da 319 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 34 304 9.4E-103 T 13-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VAA_02029 4141404a1d5abd5cd8de001f991129da 319 Gene3D G3DSA:1.10.4200.10 182 307 3.0E-7 T 13-10-2018 VAA_02029 4141404a1d5abd5cd8de001f991129da 319 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 319 149.068 T 13-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 VAA_00844 a2d9632d6a8f1090612ca63e015b2748 213 SUPERFAMILY SSF161098 13 201 6.28E-42 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00844 a2d9632d6a8f1090612ca63e015b2748 213 Gene3D G3DSA:1.10.3720.10 1 203 1.2E-47 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00844 a2d9632d6a8f1090612ca63e015b2748 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 200 9.2E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00844 a2d9632d6a8f1090612ca63e015b2748 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 3.2E-23 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_02165 11b9a7d4e87ec9b530a8dd8f45c89f6f 243 Gene3D G3DSA:1.10.10.2260 88 194 1.7E-49 T 13-10-2018 VAA_02165 11b9a7d4e87ec9b530a8dd8f45c89f6f 243 Pfam PF04288 MukE-like family 10 235 1.8E-119 T 13-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VAA_02165 11b9a7d4e87ec9b530a8dd8f45c89f6f 243 Gene3D G3DSA:1.10.10.2250 1 78 1.1E-36 T 13-10-2018 VAA_02165 11b9a7d4e87ec9b530a8dd8f45c89f6f 243 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 49.753 T 13-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VAA_00699 58a2d93cca76c3797c7dcbe388c6370f 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 330 1.1E-136 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 VAA_00699 58a2d93cca76c3797c7dcbe388c6370f 333 Pfam PF13531 Bacterial extracellular solute-binding protein 47 283 4.4E-36 T 13-10-2018 VAA_00699 58a2d93cca76c3797c7dcbe388c6370f 333 Gene3D G3DSA:3.40.190.10 117 329 3.0E-117 T 13-10-2018 VAA_00699 58a2d93cca76c3797c7dcbe388c6370f 333 SUPERFAMILY SSF53850 22 330 1.6E-71 T 13-10-2018 VAA_00699 58a2d93cca76c3797c7dcbe388c6370f 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 13-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 VAA_00699 58a2d93cca76c3797c7dcbe388c6370f 333 Gene3D G3DSA:3.40.190.10 30 299 3.0E-117 T 13-10-2018 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.2E-21 T 13-10-2018 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 SMART SM00344 12 121 2.3E-54 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 Gene3D G3DSA:3.30.70.920 64 159 3.2E-24 T 13-10-2018 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 Gene3D G3DSA:1.10.10.10 1 63 6.5E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 SUPERFAMILY SSF54909 74 157 1.88E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 SUPERFAMILY SSF46785 12 70 3.07E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02280 efa28f7e4c475bdcbd93c0470d878d2e 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 2.7E-23 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAA_00347 008113907328c67d865df1af1a78d356 359 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 146 162 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAA_00347 008113907328c67d865df1af1a78d356 359 SUPERFAMILY SSF51726 5 358 1.31E-120 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAA_00347 008113907328c67d865df1af1a78d356 359 Gene3D G3DSA:3.20.20.210 5 359 1.8E-158 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAA_00347 008113907328c67d865df1af1a78d356 359 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 26 35 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAA_00347 008113907328c67d865df1af1a78d356 359 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 10 354 50.28 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAA_00347 008113907328c67d865df1af1a78d356 359 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 13 351 6.9E-139 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAA_00347 008113907328c67d865df1af1a78d356 359 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 352 3.1E-140 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 6.6E-34 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 3.7E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 3.7E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 3.7E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 3.7E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 3.7E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 Gene3D G3DSA:3.30.930.10 107 434 2.9E-113 T 13-10-2018 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 SUPERFAMILY SSF55681 118 429 4.23E-99 T 13-10-2018 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 Gene3D G3DSA:1.10.287.40 1 106 4.2E-20 T 13-10-2018 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.157 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.9E-168 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 SUPERFAMILY SSF46589 1 114 3.77E-27 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 PIRSF PIRSF001529 1 435 7.1E-184 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VAA_03232 b4cbda8997e85e6c67b6aa31876f596a 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.2E-28 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VAA_00537 a80e621e595a7d8b5d633d060fd4f7fc 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 467 3.9E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00537 a80e621e595a7d8b5d633d060fd4f7fc 548 Gene3D G3DSA:1.10.3720.10 280 541 3.2E-30 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00537 a80e621e595a7d8b5d633d060fd4f7fc 548 SUPERFAMILY SSF161098 260 529 1.7E-34 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00537 a80e621e595a7d8b5d633d060fd4f7fc 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 279 539 1.5E-75 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 9.4E-116 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 SUPERFAMILY SSF48008 79 270 4.84E-57 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 137.526 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 Pfam PF07840 FadR C-terminal domain 72 274 3.1E-67 T 13-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 Gene3D G3DSA:1.20.120.530 80 279 8.0E-34 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 SUPERFAMILY SSF46785 12 74 1.32E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 Gene3D G3DSA:1.10.10.10 1 79 2.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 1.6E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_0321 9ee9d65da5eb80c59a02093c5b78fe84 279 SMART SM00345 12 71 1.7E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_00118 1e5ef3b01e78ff6a37d1fb9215b1b9e2 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 7.0E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VAA_00118 1e5ef3b01e78ff6a37d1fb9215b1b9e2 88 SUPERFAMILY SSF50182 7 69 1.62E-24 T 13-10-2018 IPR010920 LSM domain superfamily VAA_00118 1e5ef3b01e78ff6a37d1fb9215b1b9e2 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VAA_00118 1e5ef3b01e78ff6a37d1fb9215b1b9e2 88 Gene3D G3DSA:2.30.30.100 1 72 1.8E-34 T 13-10-2018 VAA_00118 1e5ef3b01e78ff6a37d1fb9215b1b9e2 88 Pfam PF17209 Hfq protein 7 68 4.3E-31 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.5E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 Pfam PF03466 LysR substrate binding domain 91 295 5.4E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02262 f0841744ab6246d96e3aa926a840396a 305 Gene3D G3DSA:3.40.190.10 95 292 1.0E-71 T 13-10-2018 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 SUPERFAMILY SSF53850 91 298 2.9E-39 T 13-10-2018 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 SUPERFAMILY SSF46785 3 114 9.25E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02262 f0841744ab6246d96e3aa926a840396a 305 Gene3D G3DSA:3.40.190.10 165 269 1.0E-71 T 13-10-2018 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 Gene3D G3DSA:1.10.10.10 3 94 5.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02262 f0841744ab6246d96e3aa926a840396a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02262 f0841744ab6246d96e3aa926a840396a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 464 49.103 T 13-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 Pfam PF00654 Voltage gated chloride channel 88 435 5.1E-96 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 SUPERFAMILY SSF81340 27 451 6.67E-116 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 Gene3D G3DSA:1.10.3080.10 15 459 3.9E-145 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 PRINTS PR00762 Chloride channel signature 181 200 2.2E-29 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 PRINTS PR00762 Chloride channel signature 350 370 2.2E-29 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 PRINTS PR00762 Chloride channel signature 385 401 2.2E-29 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 PRINTS PR00762 Chloride channel signature 100 117 2.2E-29 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAA_01014 048b9b12a48591c2bab8b7c81fcbc5a6 465 PRINTS PR00762 Chloride channel signature 403 422 2.2E-29 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 67 3.3E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 Gene3D G3DSA:3.40.190.10 97 296 5.1E-53 T 13-10-2018 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.2E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 SUPERFAMILY SSF46785 4 116 6.33E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 SUPERFAMILY SSF53850 93 298 9.46E-32 T 13-10-2018 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 Gene3D G3DSA:1.10.10.10 2 89 3.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 Gene3D G3DSA:3.40.190.10 167 268 5.1E-53 T 13-10-2018 VAA_00532 8e148d1116c016e4c099a433c08d61e6 300 Pfam PF03466 LysR substrate binding domain 93 296 1.4E-35 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_03374 b7c767d372fb8353781efe732a43c0fc 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 7.2E-72 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VAA_03374 b7c767d372fb8353781efe732a43c0fc 183 Gene3D G3DSA:3.40.30.10 21 183 1.3E-44 T 13-10-2018 VAA_03374 b7c767d372fb8353781efe732a43c0fc 183 Pfam PF08534 Redoxin 42 165 4.1E-25 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VAA_03374 b7c767d372fb8353781efe732a43c0fc 183 SUPERFAMILY SSF52833 46 177 2.25E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03374 b7c767d372fb8353781efe732a43c0fc 183 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAA_02915 7a0c415d5da892a9486bd62cefbd79ac 277 Gene3D G3DSA:1.10.1660.10 10 84 2.5E-26 T 13-10-2018 VAA_02915 7a0c415d5da892a9486bd62cefbd79ac 277 Pfam PF13411 MerR HTH family regulatory protein 17 84 2.5E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02915 7a0c415d5da892a9486bd62cefbd79ac 277 SMART SM00422 17 86 3.6E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02915 7a0c415d5da892a9486bd62cefbd79ac 277 SUPERFAMILY SSF46955 17 117 2.01E-19 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.2E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.2E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.2E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.2E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.2E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 Gene3D G3DSA:3.40.50.720 4 327 4.9E-124 T 13-10-2018 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 8.1E-58 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 SMART SM00846 3 152 3.5E-69 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 SUPERFAMILY SSF55347 152 314 6.25E-62 T 13-10-2018 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 SUPERFAMILY SSF51735 1 179 1.21E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 4.3E-31 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 PIRSF PIRSF000149 1 331 1.5E-113 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 Gene3D G3DSA:3.30.360.10 151 315 4.9E-124 T 13-10-2018 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00950 6e950f64a2ee5163dd22d313042a3e65 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 3.8E-116 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_03321 79756d94284fd043756a1cb8387218ec 453 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 36 448 1.0E-134 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VAA_03321 79756d94284fd043756a1cb8387218ec 453 Pfam PF01966 HD domain 74 155 7.6E-7 T 13-10-2018 IPR006674 HD domain VAA_03321 79756d94284fd043756a1cb8387218ec 453 SMART SM00471 70 276 5.3E-8 T 13-10-2018 IPR003607 HD/PDEase domain VAA_03321 79756d94284fd043756a1cb8387218ec 453 SUPERFAMILY SSF109604 31 450 2.62E-83 T 13-10-2018 VAA_03321 79756d94284fd043756a1cb8387218ec 453 Pfam PF13286 Phosphohydrolase-associated domain 355 445 1.2E-28 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain VAA_03321 79756d94284fd043756a1cb8387218ec 453 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 11 447 34.612 T 13-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VAA_01407 da934054b115cf88246216650460c376 242 Pfam PF00929 Exonuclease 53 223 3.4E-16 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01407 da934054b115cf88246216650460c376 242 SUPERFAMILY SSF53098 45 233 8.23E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_01407 da934054b115cf88246216650460c376 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 49 232 1.3E-23 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_01407 da934054b115cf88246216650460c376 242 SMART SM00479 51 232 6.8E-26 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01407 da934054b115cf88246216650460c376 242 Gene3D G3DSA:3.30.420.10 48 234 4.9E-38 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03132 9e4c48ad7047189646b4ab7a276de169 227 PIRSF PIRSF028111 1 226 1.7E-83 T 13-10-2018 IPR016868 Bacteriophage B3, Orf5 VAA_03132 9e4c48ad7047189646b4ab7a276de169 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 9.5E-12 T 13-10-2018 IPR024498 Domain of unknown function DUF2786 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.3E-21 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Gene3D G3DSA:3.40.50.300 90 285 6.3E-122 T 13-10-2018 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.3E-74 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 SUPERFAMILY SSF52540 42 352 9.21E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Gene3D G3DSA:1.10.260.30 328 454 2.8E-44 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 SUPERFAMILY SSF47446 298 430 2.09E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Gene3D G3DSA:1.20.120.140 4 305 6.3E-122 T 13-10-2018 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 453 33.866 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 SMART SM00382 99 247 3.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 SMART SM00962 100 296 4.2E-115 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 Pfam PF02978 Signal peptide binding domain 329 427 4.7E-33 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 SMART SM00963 1 86 4.1E-35 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00720 46dbbe6f4efd00e52a15d0f313552182 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 3.1E-177 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 Gene3D G3DSA:3.40.50.720 144 251 2.1E-13 T 13-10-2018 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 Gene3D G3DSA:1.10.1060.10 12 143 2.3E-24 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 3.7E-194 T 13-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 Gene3D G3DSA:3.50.50.60 252 406 1.1E-37 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 SUPERFAMILY SSF46548 2 155 7.85E-35 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 3.0E-24 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 SUPERFAMILY SSF51971 389 479 3.88E-8 T 13-10-2018 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.5E-23 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 SUPERFAMILY SSF51971 143 407 1.65E-63 T 13-10-2018 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.8E-23 T 13-10-2018 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.8E-23 T 13-10-2018 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.8E-23 T 13-10-2018 VAA_03692 af078fad8c88b7a976779ad1e263b0b1 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.8E-23 T 13-10-2018 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Gene3D G3DSA:2.40.50.180 609 670 8.5E-37 T 13-10-2018 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Pfam PF01627 Hpt domain 16 104 1.3E-15 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SMART SM00387 445 586 5.8E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Gene3D G3DSA:1.20.120.160 5 148 1.2E-33 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SMART SM00260 578 715 2.3E-34 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Gene3D G3DSA:2.30.30.40 586 711 8.5E-37 T 13-10-2018 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 504 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 8.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SUPERFAMILY SSF47384 341 401 8.63E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SMART SM01231 340 400 8.0E-14 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 341 394 1.3E-7 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SUPERFAMILY SSF55874 403 584 1.83E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SUPERFAMILY SSF47226 13 137 3.27E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Gene3D G3DSA:3.30.565.10 401 585 7.7E-58 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Gene3D G3DSA:1.10.287.560 340 400 8.0E-7 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 448 585 1.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SMART SM00073 13 112 6.2E-16 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 SUPERFAMILY SSF50341 585 714 6.15E-33 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01414 5044bc057e8d9155e0d5dda1085de92d 731 Pfam PF01584 CheW-like domain 592 717 2.5E-26 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 SMART SM00283 360 624 5.1E-46 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 SUPERFAMILY SSF58104 314 623 4.97E-60 T 13-10-2018 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 Gene3D G3DSA:1.10.287.950 294 609 1.9E-62 T 13-10-2018 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 2.4E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 2.4E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 2.4E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 590 3.0E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03188 89f83829c7dc8787d3eec5b3ee7edd79 625 SMART SM00304 294 348 0.0086 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SUPERFAMILY SSF54556 627 750 2.75E-15 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 ProSitePatterns PS01095 Chitinases family 18 active site. 469 477 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SUPERFAMILY SSF51445 314 784 4.82E-76 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Pfam PF00704 Glycosyl hydrolases family 18 321 780 5.1E-86 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Gene3D G3DSA:2.60.40.10 95 188 1.4E-20 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Gene3D G3DSA:2.60.40.10 195 282 6.0E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Gene3D G3DSA:3.20.20.80 303 648 2.4E-81 T 13-10-2018 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Pfam PF06483 Chitinase C 808 973 1.1E-70 T 13-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Gene3D G3DSA:3.20.20.80 755 781 8.2E-15 T 13-10-2018 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SMART SM00495 1003 1048 0.093 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SMART SM00495 37 83 4.6E-12 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Gene3D G3DSA:2.10.10.20 33 87 6.0E-12 T 13-10-2018 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 Gene3D G3DSA:3.10.50.10 719 754 8.2E-15 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SUPERFAMILY SSF51055 22 86 3.01E-15 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SUPERFAMILY SSF49299 190 282 2.35E-5 T 13-10-2018 IPR035986 PKD domain superfamily VAA_01569 105cbb881436431ebf643c45e5094cfe 1051 SMART SM00636 320 780 3.9E-123 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VAA_00528 d3fadfb0cc94b8c4f5dfb7945995b858 159 SMART SM00116 22 70 6.2E-8 T 13-10-2018 IPR000644 CBS domain VAA_00528 d3fadfb0cc94b8c4f5dfb7945995b858 159 SMART SM00116 95 142 7.4E-9 T 13-10-2018 IPR000644 CBS domain VAA_00528 d3fadfb0cc94b8c4f5dfb7945995b858 159 Gene3D G3DSA:3.10.580.10 10 159 1.4E-50 T 13-10-2018 VAA_00528 d3fadfb0cc94b8c4f5dfb7945995b858 159 SUPERFAMILY SSF54631 12 142 8.72E-34 T 13-10-2018 VAA_00528 d3fadfb0cc94b8c4f5dfb7945995b858 159 Pfam PF00571 CBS domain 15 69 4.2E-12 T 13-10-2018 IPR000644 CBS domain VAA_00528 d3fadfb0cc94b8c4f5dfb7945995b858 159 Pfam PF00571 CBS domain 90 139 5.0E-11 T 13-10-2018 IPR000644 CBS domain VAA_01343 ee8afeb63e1a293fdc44e38def69139b 412 SUPERFAMILY SSF56935 54 412 7.78E-80 T 13-10-2018 VAA_01343 ee8afeb63e1a293fdc44e38def69139b 412 Gene3D G3DSA:2.40.170.10 53 412 7.6E-64 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VAA_01343 ee8afeb63e1a293fdc44e38def69139b 412 Pfam PF02264 LamB porin 55 412 5.5E-72 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VAA_01343 ee8afeb63e1a293fdc44e38def69139b 412 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 110 384 8.0E-38 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 2.5E-118 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 PIRSF PIRSF001434 1 391 9.7E-126 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 Gene3D G3DSA:3.90.1150.10 256 390 2.2E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 2.1E-171 T 13-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 Gene3D G3DSA:3.40.640.10 3 255 5.4E-79 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02128 5ed9965dee144ed61fc6b3ddc9724e1e 398 SUPERFAMILY SSF53383 22 388 5.17E-100 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02000 011aeb2c03542d946a879dcda1744d27 580 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.5E-23 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_02000 011aeb2c03542d946a879dcda1744d27 580 SUPERFAMILY SSF57829 424 465 2.2E-6 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VAA_02000 011aeb2c03542d946a879dcda1744d27 580 SMART SM00490 261 344 1.1E-10 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02000 011aeb2c03542d946a879dcda1744d27 580 SUPERFAMILY SSF52540 48 362 4.88E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02000 011aeb2c03542d946a879dcda1744d27 580 Pfam PF00271 Helicase conserved C-terminal domain 239 342 6.6E-15 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02000 011aeb2c03542d946a879dcda1744d27 580 SMART SM00487 1 184 1.7E-13 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02000 011aeb2c03542d946a879dcda1744d27 580 Gene3D G3DSA:3.40.50.300 1 166 6.1E-29 T 13-10-2018 VAA_02000 011aeb2c03542d946a879dcda1744d27 580 Gene3D G3DSA:3.40.50.300 208 367 2.9E-34 T 13-10-2018 VAA_03982 2d9a93a779989701ab405f3151891acc 486 Gene3D G3DSA:3.40.50.920 360 486 7.8E-46 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_03982 2d9a93a779989701ab405f3151891acc 486 Pfam PF02779 Transketolase, pyrimidine binding domain 176 346 3.7E-48 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_03982 2d9a93a779989701ab405f3151891acc 486 SUPERFAMILY SSF52922 354 486 9.29E-45 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_03982 2d9a93a779989701ab405f3151891acc 486 SMART SM00861 176 347 1.9E-67 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_03982 2d9a93a779989701ab405f3151891acc 486 SUPERFAMILY SSF52518 156 348 8.84E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03982 2d9a93a779989701ab405f3151891acc 486 ProSitePatterns PS00802 Transketolase signature 2. 289 305 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_03982 2d9a93a779989701ab405f3151891acc 486 SUPERFAMILY SSF52518 55 151 1.31E-20 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03982 2d9a93a779989701ab405f3151891acc 486 Gene3D G3DSA:3.40.50.970 148 359 3.3E-85 T 13-10-2018 VAA_03982 2d9a93a779989701ab405f3151891acc 486 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 53 155 9.3E-35 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_03982 2d9a93a779989701ab405f3151891acc 486 Gene3D G3DSA:3.40.50.970 36 147 4.0E-23 T 13-10-2018 VAA_03982 2d9a93a779989701ab405f3151891acc 486 Pfam PF02780 Transketolase, C-terminal domain 366 477 1.6E-20 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VAA_03429 d4186b341f853afe57a0d5f60eea7e94 167 Gene3D G3DSA:1.10.10.10 19 102 4.8E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03429 d4186b341f853afe57a0d5f60eea7e94 167 SUPERFAMILY SSF46785 23 153 1.3E-43 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03429 d4186b341f853afe57a0d5f60eea7e94 167 Gene3D G3DSA:3.30.1490.190 103 159 4.8E-23 T 13-10-2018 VAA_03429 d4186b341f853afe57a0d5f60eea7e94 167 Pfam PF01475 Ferric uptake regulator family 29 148 1.7E-46 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VAA_02208 42d8c90a46633cca380e6347761141a9 456 SUPERFAMILY SSF48557 4 448 1.13E-108 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAA_02208 42d8c90a46633cca380e6347761141a9 456 Gene3D G3DSA:1.10.40.30 383 446 1.3E-157 T 13-10-2018 VAA_02208 42d8c90a46633cca380e6347761141a9 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 2.5E-149 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAA_02208 42d8c90a46633cca380e6347761141a9 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.2E-19 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02208 42d8c90a46633cca380e6347761141a9 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.2E-19 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02208 42d8c90a46633cca380e6347761141a9 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.2E-19 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02208 42d8c90a46633cca380e6347761141a9 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.2E-19 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02208 42d8c90a46633cca380e6347761141a9 456 Pfam PF00206 Lyase 14 313 4.9E-72 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VAA_02208 42d8c90a46633cca380e6347761141a9 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAA_02208 42d8c90a46633cca380e6347761141a9 456 Gene3D G3DSA:1.10.275.10 1 117 3.3E-50 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VAA_02208 42d8c90a46633cca380e6347761141a9 456 Gene3D G3DSA:1.20.200.10 118 447 1.3E-157 T 13-10-2018 VAA_02208 42d8c90a46633cca380e6347761141a9 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.0E-51 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VAA_02481 b0fd429e53fba880a517f975476fe69a 447 Pfam PF14524 Wzt C-terminal domain 296 426 5.6E-31 T 13-10-2018 IPR029439 Wzt, C-terminal VAA_02481 b0fd429e53fba880a517f975476fe69a 447 SUPERFAMILY SSF52540 36 242 1.09E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02481 b0fd429e53fba880a517f975476fe69a 447 Pfam PF00005 ABC transporter 44 176 5.4E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02481 b0fd429e53fba880a517f975476fe69a 447 SMART SM00382 53 227 9.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02481 b0fd429e53fba880a517f975476fe69a 447 Gene3D G3DSA:3.40.50.300 6 289 3.0E-45 T 13-10-2018 VAA_02481 b0fd429e53fba880a517f975476fe69a 447 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02481 b0fd429e53fba880a517f975476fe69a 447 Gene3D G3DSA:2.70.50.60 290 426 1.6E-16 T 13-10-2018 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 SMART SM00490 519 603 2.7E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Gene3D G3DSA:2.30.30.930 55 114 7.1E-28 T 13-10-2018 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 SMART SM00487 150 342 1.5E-15 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Gene3D G3DSA:3.40.50.300 432 635 5.7E-47 T 13-10-2018 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 2.6E-16 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Gene3D G3DSA:2.30.30.140 1 53 9.9E-24 T 13-10-2018 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Gene3D G3DSA:3.30.360.80 714 786 4.0E-30 T 13-10-2018 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 9.5E-16 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.143 T 13-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Gene3D G3DSA:3.40.50.10810 150 431 3.7E-106 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 SUPERFAMILY SSF52540 273 651 1.11E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.0E-146 T 13-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VAA_02765 2e2b8a252e34ede2073a8be908d020d9 969 SUPERFAMILY SSF52540 115 377 6.41E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 Gene3D G3DSA:3.30.420.40 12 534 1.6E-121 T 13-10-2018 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 Gene3D G3DSA:3.30.420.460 344 536 1.6E-121 T 13-10-2018 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 SUPERFAMILY SSF53067 294 555 1.02E-44 T 13-10-2018 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 Hamap MF_00520 Ribulokinase [araB]. 10 566 45.363 T 13-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 SUPERFAMILY SSF53067 12 292 6.09E-29 T 13-10-2018 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 12 289 4.7E-18 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 PIRSF PIRSF000538 10 561 2.7E-49 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 299 509 1.5E-34 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VAA_00563 f72db52d9bec8c7b677d526182aecfab 570 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 12 556 3.8E-190 T 13-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Gene3D G3DSA:3.10.450.490 19 111 1.6E-9 T 13-10-2018 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 357 501 1.3E-34 T 13-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Gene3D G3DSA:2.60.120.380 512 611 1.0E-37 T 13-10-2018 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 211 354 3.5E-36 T 13-10-2018 IPR013856 Peptidase M4 domain GO:0004222 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 532 597 2.4E-10 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 94 3.1E-12 T 13-10-2018 IPR011096 FTP domain VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 345 361 1.3E-27 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 311 331 1.3E-27 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 366 377 1.3E-27 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 428 444 1.3E-27 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Gene3D G3DSA:3.10.450.40 112 199 1.5E-25 T 13-10-2018 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Gene3D G3DSA:1.10.390.10 359 508 3.1E-48 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Gene3D G3DSA:3.10.170.10 202 358 7.5E-60 T 13-10-2018 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 SUPERFAMILY SSF89260 515 609 2.09E-6 T 13-10-2018 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 SUPERFAMILY SSF55486 204 503 8.97E-87 T 13-10-2018 VAA_01306 9dc872cab482c546d8499e42eb1fa435 611 Pfam PF03413 Peptidase propeptide and YPEB domain 119 194 1.6E-10 T 13-10-2018 IPR025711 PepSY domain VAA_03078 4fe3d904d19566ca9867ce65753c7ab2 251 SUPERFAMILY SSF52540 16 228 1.66E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03078 4fe3d904d19566ca9867ce65753c7ab2 251 Pfam PF00005 ABC transporter 15 164 1.3E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03078 4fe3d904d19566ca9867ce65753c7ab2 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 44.251 T 13-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VAA_03078 4fe3d904d19566ca9867ce65753c7ab2 251 Gene3D G3DSA:3.40.50.300 3 250 8.4E-55 T 13-10-2018 VAA_03078 4fe3d904d19566ca9867ce65753c7ab2 251 SMART SM00382 22 213 6.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 SUPERFAMILY SSF63380 93 198 4.17E-32 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 PIRSF PIRSF000498 1 212 1.1E-79 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 Gene3D G3DSA:2.40.30.20 102 205 7.5E-35 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 Gene3D G3DSA:2.40.30.20 1 89 2.6E-27 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 Pfam PF00677 Lumazine binding domain 100 184 4.6E-23 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 Pfam PF00677 Lumazine binding domain 3 87 1.5E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.2E-65 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03588 9e50961182b1102e70f314d1573ce0c5 218 SUPERFAMILY SSF63380 1 89 2.13E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_01298 26cfc1adf98a65515b23c17024920dc9 288 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 16 284 6.3E-98 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VAA_01298 26cfc1adf98a65515b23c17024920dc9 288 Gene3D G3DSA:1.10.3720.10 60 286 6.0E-35 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01298 26cfc1adf98a65515b23c17024920dc9 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 284 1.2E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01298 26cfc1adf98a65515b23c17024920dc9 288 SUPERFAMILY SSF161098 23 275 5.23E-41 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.7E-9 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.7E-9 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 3.0E-37 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 SUPERFAMILY SSF46977 444 583 7.46E-43 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 PIRSF PIRSF000171 1 571 5.1E-44 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 Gene3D G3DSA:4.10.80.40 543 577 3.3E-16 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 Pfam PF00890 FAD binding domain 7 397 9.1E-114 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 SUPERFAMILY SSF51905 3 440 8.53E-74 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 Gene3D G3DSA:3.50.50.60 7 409 4.4E-161 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 SUPERFAMILY SSF56425 227 358 2.39E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 Gene3D G3DSA:1.20.58.100 424 538 5.5E-35 T 13-10-2018 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 Gene3D G3DSA:3.90.700.10 237 363 4.4E-161 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 13-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VAA_02609 fd8344cd0856b4e32035b06594a9fa0f 604 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.1E-235 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_01862 fe6970913d063947a11b7b42844a998d 709 SUPERFAMILY SSF53335 140 371 1.88E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01862 fe6970913d063947a11b7b42844a998d 709 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_01862 fe6970913d063947a11b7b42844a998d 709 Gene3D G3DSA:3.40.50.150 169 371 1.0E-135 T 13-10-2018 VAA_01862 fe6970913d063947a11b7b42844a998d 709 SMART SM00981 56 154 5.7E-19 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VAA_01862 fe6970913d063947a11b7b42844a998d 709 PIRSF PIRSF037618 1 707 1.1E-294 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VAA_01862 fe6970913d063947a11b7b42844a998d 709 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 2.1E-57 T 13-10-2018 IPR000241 Putative RNA methylase domain VAA_01862 fe6970913d063947a11b7b42844a998d 709 Gene3D G3DSA:3.30.2130.30 6 255 1.0E-135 T 13-10-2018 VAA_01862 fe6970913d063947a11b7b42844a998d 709 Gene3D G3DSA:3.30.750.80 396 487 1.8E-34 T 13-10-2018 VAA_01862 fe6970913d063947a11b7b42844a998d 709 Pfam PF02926 THUMP domain 31 153 2.4E-13 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VAA_01862 fe6970913d063947a11b7b42844a998d 709 SUPERFAMILY SSF53335 399 705 4.51E-70 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01862 fe6970913d063947a11b7b42844a998d 709 Gene3D G3DSA:3.40.50.150 488 706 6.2E-74 T 13-10-2018 VAA_01862 fe6970913d063947a11b7b42844a998d 709 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.385 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VAA_01862 fe6970913d063947a11b7b42844a998d 709 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 13-10-2018 IPR000241 Putative RNA methylase domain VAA_01862 fe6970913d063947a11b7b42844a998d 709 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 441 662 1.6E-26 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VAA_01739 b2e6ab21379d9b61e559cddc9bbd5ef5 177 SUPERFAMILY SSF50249 4 177 7.88E-62 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01739 b2e6ab21379d9b61e559cddc9bbd5ef5 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 7.3E-62 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VAA_01739 b2e6ab21379d9b61e559cddc9bbd5ef5 177 Gene3D G3DSA:2.40.50.140 2 148 6.9E-51 T 13-10-2018 VAA_01739 b2e6ab21379d9b61e559cddc9bbd5ef5 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.114 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VAA_01739 b2e6ab21379d9b61e559cddc9bbd5ef5 177 PIRSF PIRSF002070 2 174 1.4E-36 T 13-10-2018 VAA_01739 b2e6ab21379d9b61e559cddc9bbd5ef5 177 Pfam PF00436 Single-strand binding protein family 6 106 1.2E-42 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 SMART SM00487 15 222 1.9E-45 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 SMART SM00490 251 332 3.2E-31 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 Gene3D G3DSA:3.40.50.300 1 213 6.6E-61 T 13-10-2018 VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 146 154 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 Pfam PF00270 DEAD/DEAH box helicase 25 187 3.4E-44 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 Pfam PF00271 Helicase conserved C-terminal domain 224 332 9.7E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 SUPERFAMILY SSF52540 69 349 7.41E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02007 9da545e4c9ed8a7b64aa1dc5e2440b07 421 Gene3D G3DSA:3.40.50.300 214 420 3.1E-48 T 13-10-2018 VAA_01516 e8ed496e0ff970b72241bd2c50b73ba9 552 Gene3D G3DSA:1.10.8.300 229 300 1.5E-25 T 13-10-2018 VAA_01516 e8ed496e0ff970b72241bd2c50b73ba9 552 Gene3D G3DSA:3.40.50.300 8 228 2.7E-59 T 13-10-2018 VAA_01516 e8ed496e0ff970b72241bd2c50b73ba9 552 Pfam PF12592 Protein of unknown function (DUF3763) 482 534 2.8E-19 T 13-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VAA_01516 e8ed496e0ff970b72241bd2c50b73ba9 552 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.2E-22 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VAA_01516 e8ed496e0ff970b72241bd2c50b73ba9 552 SUPERFAMILY SSF52540 18 243 3.14E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01516 e8ed496e0ff970b72241bd2c50b73ba9 552 SMART SM00382 46 246 8.8E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01540 9a58b7d1b25c2ec91bbf5e4edd54a201 83 Gene3D G3DSA:1.20.1280.290 3 82 7.0E-6 T 13-10-2018 VAA_01540 9a58b7d1b25c2ec91bbf5e4edd54a201 83 Pfam PF10688 Bacterial inner membrane protein 4 73 6.5E-10 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VAA_01540 9a58b7d1b25c2ec91bbf5e4edd54a201 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 1.0E-31 T 13-10-2018 IPR020137 Uncharacterised protein family HI1736 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Gene3D G3DSA:3.30.56.50 2 50 2.6E-23 T 13-10-2018 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 SUPERFAMILY SSF50447 574 656 1.56E-24 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.2E-16 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VAA_00804 e0e3171860c7b480f471013520a1ee12 902 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 405 559 4.7E-32 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 SUPERFAMILY SSF52156 679 808 1.57E-38 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VAA_00804 e0e3171860c7b480f471013520a1ee12 902 SUPERFAMILY SSF52540 395 569 1.11E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Pfam PF11987 Translation-initiation factor 2 686 791 1.3E-36 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Gene3D G3DSA:3.40.50.10050 696 802 1.8E-37 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 327 376 5.8E-14 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 5.9E-8 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Pfam PF03144 Elongation factor Tu domain 2 822 888 1.6E-7 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 SUPERFAMILY SSF50447 803 899 1.47E-34 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00804 e0e3171860c7b480f471013520a1ee12 902 ProSitePatterns PS01176 Initiation factor 2 signature. 852 874 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 319 901 6.2E-283 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 899 17.598 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Pfam PF00009 Elongation factor Tu GTP binding domain 405 562 2.0E-32 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Gene3D G3DSA:3.40.50.300 398 572 1.8E-69 T 13-10-2018 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Gene3D G3DSA:2.40.30.10 803 900 1.6E-34 T 13-10-2018 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 Gene3D G3DSA:2.40.30.10 573 691 1.9E-41 T 13-10-2018 VAA_00804 e0e3171860c7b480f471013520a1ee12 902 SUPERFAMILY SSF46955 3 50 6.96E-12 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_01503 f5f1064c8c82f29b62e2fa79e606dd71 224 Pfam PF00005 ABC transporter 25 171 2.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01503 f5f1064c8c82f29b62e2fa79e606dd71 224 SMART SM00382 34 224 1.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01503 f5f1064c8c82f29b62e2fa79e606dd71 224 SUPERFAMILY SSF52540 5 223 8.45E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01503 f5f1064c8c82f29b62e2fa79e606dd71 224 Gene3D G3DSA:3.40.50.300 3 224 1.3E-70 T 13-10-2018 VAA_01503 f5f1064c8c82f29b62e2fa79e606dd71 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 SMART SM00345 34 92 4.9E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 SUPERFAMILY SSF46785 27 118 3.29E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 92 1.3E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 SMART SM00895 102 229 5.0E-25 T 13-10-2018 IPR011711 GntR, C-terminal VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 SUPERFAMILY SSF48008 99 231 9.15E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 Pfam PF07729 FCD domain 102 227 5.7E-28 T 13-10-2018 IPR011711 GntR, C-terminal VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 Gene3D G3DSA:1.20.120.530 95 236 1.1E-30 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAA_02056 6f0137a20d5730b025fe84f69baef21a 241 Gene3D G3DSA:1.10.10.10 7 93 5.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00741 21457e30b79871e262e990c3c1c695f8 627 SUPERFAMILY SSF47005 313 358 2.22E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 SUPERFAMILY SSF51230 102 189 5.76E-21 T 13-10-2018 IPR011053 Single hybrid motif VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Pfam PF00364 Biotin-requiring enzyme 202 272 2.1E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Pfam PF00364 Biotin-requiring enzyme 4 73 3.8E-20 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Pfam PF00364 Biotin-requiring enzyme 103 173 4.3E-20 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Gene3D G3DSA:4.10.320.10 320 364 3.0E-20 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Gene3D G3DSA:2.40.50.100 102 178 6.0E-20 T 13-10-2018 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Gene3D G3DSA:2.40.50.100 200 278 4.3E-21 T 13-10-2018 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Gene3D G3DSA:2.40.50.100 1 80 7.9E-21 T 13-10-2018 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 SUPERFAMILY SSF51230 1 89 1.14E-21 T 13-10-2018 IPR011053 Single hybrid motif VAA_00741 21457e30b79871e262e990c3c1c695f8 627 SUPERFAMILY SSF51230 200 293 2.22E-23 T 13-10-2018 IPR011053 Single hybrid motif VAA_00741 21457e30b79871e262e990c3c1c695f8 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 224 253 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 SUPERFAMILY SSF52777 385 626 4.89E-81 T 13-10-2018 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 626 6.7E-79 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 627 7.5E-202 T 13-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Pfam PF02817 e3 binding domain 320 354 1.3E-13 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 Gene3D G3DSA:3.30.559.10 380 627 2.0E-95 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAA_00741 21457e30b79871e262e990c3c1c695f8 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAA_00568 7b9de3904099430cfb051356ad2e6b73 297 SUPERFAMILY SSF103481 189 289 1.83E-8 T 13-10-2018 VAA_00568 7b9de3904099430cfb051356ad2e6b73 297 SUPERFAMILY SSF103481 44 144 9.81E-13 T 13-10-2018 VAA_00568 7b9de3904099430cfb051356ad2e6b73 297 Pfam PF00892 EamA-like transporter family 9 141 1.3E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_00568 7b9de3904099430cfb051356ad2e6b73 297 Pfam PF00892 EamA-like transporter family 155 286 5.0E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_02700 6a361297426a1026ca239716d6b6c52f 461 Gene3D G3DSA:3.40.50.300 2 210 6.0E-74 T 13-10-2018 VAA_02700 6a361297426a1026ca239716d6b6c52f 461 Gene3D G3DSA:3.30.70.330 387 460 1.0E-19 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAA_02700 6a361297426a1026ca239716d6b6c52f 461 SMART SM00487 23 220 7.9E-57 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02700 6a361297426a1026ca239716d6b6c52f 461 Pfam PF00271 Helicase conserved C-terminal domain 233 338 5.3E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02700 6a361297426a1026ca239716d6b6c52f 461 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.8E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02700 6a361297426a1026ca239716d6b6c52f 461 Pfam PF03880 DbpA RNA binding domain 388 458 1.6E-22 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VAA_02700 6a361297426a1026ca239716d6b6c52f 461 Gene3D G3DSA:3.40.50.300 211 377 9.6E-46 T 13-10-2018 VAA_02700 6a361297426a1026ca239716d6b6c52f 461 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_02700 6a361297426a1026ca239716d6b6c52f 461 SUPERFAMILY SSF52540 73 358 1.84E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02700 6a361297426a1026ca239716d6b6c52f 461 SMART SM00490 257 338 2.8E-28 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02456 66f2c9f317412f8d92466cdbcf9ae7ea 83 SUPERFAMILY SSF143800 7 81 8.24E-30 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02456 66f2c9f317412f8d92466cdbcf9ae7ea 83 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 6 72 21.305 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02456 66f2c9f317412f8d92466cdbcf9ae7ea 83 Pfam PF00830 Ribosomal L28 family 8 67 7.7E-26 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02456 66f2c9f317412f8d92466cdbcf9ae7ea 83 TIGRFAM TIGR00009 L28: ribosomal protein bL28 6 63 7.4E-27 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02456 66f2c9f317412f8d92466cdbcf9ae7ea 83 Gene3D G3DSA:2.30.170.40 7 83 2.1E-32 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00904 82578fd05b361470cde6078238666ac2 421 Pfam PF00202 Aminotransferase class-III 16 409 2.0E-73 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_00904 82578fd05b361470cde6078238666ac2 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 411 7.3E-199 T 13-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VAA_00904 82578fd05b361470cde6078238666ac2 421 SUPERFAMILY SSF53383 8 412 2.72E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00904 82578fd05b361470cde6078238666ac2 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_00904 82578fd05b361470cde6078238666ac2 421 Gene3D G3DSA:3.40.640.10 54 313 2.1E-104 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00904 82578fd05b361470cde6078238666ac2 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 1.9E-143 T 13-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VAA_00904 82578fd05b361470cde6078238666ac2 421 Gene3D G3DSA:3.90.1150.10 6 405 2.1E-104 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_00904 82578fd05b361470cde6078238666ac2 421 PIRSF PIRSF000521 58 153 0.14 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_00904 82578fd05b361470cde6078238666ac2 421 PIRSF PIRSF000521 2 122 0.03 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_00904 82578fd05b361470cde6078238666ac2 421 PIRSF PIRSF000521 172 412 1.7E-32 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 SUPERFAMILY SSF103190 189 251 3.22E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 SUPERFAMILY SSF55781 407 560 1.18E-6 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 Pfam PF13487 HD domain 827 892 2.8E-23 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 SMART SM00471 601 910 0.0082 T 13-10-2018 IPR003607 HD/PDEase domain VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 Gene3D G3DSA:3.30.450.20 236 357 4.8E-6 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 SUPERFAMILY SSF109604 596 678 6.91E-8 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 Gene3D G3DSA:1.10.3210.10 580 689 1.5E-20 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 Gene3D G3DSA:1.10.3210.10 821 951 3.9E-29 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 SUPERFAMILY SSF109604 828 939 1.35E-8 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 Gene3D G3DSA:3.30.450.20 143 235 5.6E-10 T 13-10-2018 VAA_00946 4855f665b75973c34e5a1b98ed8c5299 977 Gene3D G3DSA:3.30.450.40 418 577 1.4E-7 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_03329 1c3dda9bcaaf9718a829ed52ed31d79a 399 SUPERFAMILY SSF52151 25 270 1.62E-32 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAA_03329 1c3dda9bcaaf9718a829ed52ed31d79a 399 Gene3D G3DSA:3.40.1090.10 11 149 9.4E-11 T 13-10-2018 VAA_03329 1c3dda9bcaaf9718a829ed52ed31d79a 399 Pfam PF01734 Patatin-like phospholipase 29 198 1.2E-18 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VAA_00127 ee9ace90e8182bc283143de1e6f9e0fb 134 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 9 134 2.1E-53 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VAA_00127 ee9ace90e8182bc283143de1e6f9e0fb 134 Pfam PF02635 DsrE/DsrF-like family 8 134 3.0E-26 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VAA_00127 ee9ace90e8182bc283143de1e6f9e0fb 134 Gene3D G3DSA:3.40.1260.10 3 134 4.5E-52 T 13-10-2018 IPR027396 DsrEFH-like VAA_00127 ee9ace90e8182bc283143de1e6f9e0fb 134 SUPERFAMILY SSF75169 9 134 3.14E-36 T 13-10-2018 IPR027396 DsrEFH-like VAA_04285 8aa882f89c6a239789daae5e49768293 51 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 51 17.301 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 VAA_04285 8aa882f89c6a239789daae5e49768293 51 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.8E-26 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 VAA_04285 8aa882f89c6a239789daae5e49768293 51 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 47 2.0E-14 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 VAA_00090 9d7b0d9237b9ad2a68f539f78c77eafc 165 Gene3D G3DSA:3.40.630.30 2 159 2.1E-43 T 13-10-2018 VAA_00090 9d7b0d9237b9ad2a68f539f78c77eafc 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 150 1.9E-9 T 13-10-2018 IPR000182 GNAT domain VAA_00090 9d7b0d9237b9ad2a68f539f78c77eafc 165 SUPERFAMILY SSF55729 17 145 5.13E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00464 f0014f6d7f12c9aa6d89280e46702def 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 48 90 1.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00464 f0014f6d7f12c9aa6d89280e46702def 242 ProSitePatterns PS01081 TetR-type HTH domain signature. 60 90 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VAA_00464 f0014f6d7f12c9aa6d89280e46702def 242 SUPERFAMILY SSF46689 34 109 3.97E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00464 f0014f6d7f12c9aa6d89280e46702def 242 Gene3D G3DSA:1.10.357.10 85 238 2.1E-32 T 13-10-2018 VAA_00464 f0014f6d7f12c9aa6d89280e46702def 242 Gene3D G3DSA:1.10.10.60 33 84 2.7E-22 T 13-10-2018 VAA_02678 839feb47b9c4fd36cf47f9b532a098b3 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02678 839feb47b9c4fd36cf47f9b532a098b3 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 18.685 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02678 839feb47b9c4fd36cf47f9b532a098b3 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 1.2E-23 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02678 839feb47b9c4fd36cf47f9b532a098b3 64 Pfam PF00831 Ribosomal L29 protein 6 61 1.4E-24 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02678 839feb47b9c4fd36cf47f9b532a098b3 64 Gene3D G3DSA:1.10.287.310 2 63 9.1E-30 T 13-10-2018 VAA_02678 839feb47b9c4fd36cf47f9b532a098b3 64 SUPERFAMILY SSF46561 2 62 1.57E-22 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 SUPERFAMILY SSF55073 185 335 3.37E-33 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 327 6.4E-29 T 13-10-2018 IPR000160 GGDEF domain VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 329 2.7E-27 T 13-10-2018 IPR000160 GGDEF domain VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 Pfam PF00563 EAL domain 360 591 2.1E-57 T 13-10-2018 IPR001633 EAL domain VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 SMART SM00267 169 334 1.1E-30 T 13-10-2018 IPR000160 GGDEF domain VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 Gene3D G3DSA:3.20.20.450 346 605 1.5E-72 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 SUPERFAMILY SSF55781 26 168 2.71E-8 T 13-10-2018 VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 SUPERFAMILY SSF141868 362 603 5.89E-71 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 SMART SM00052 344 596 1.5E-74 T 13-10-2018 IPR001633 EAL domain VAA_01290 dc665f4ed7631b4158d870ef885b67b3 610 Gene3D G3DSA:3.30.70.270 174 345 7.1E-37 T 13-10-2018 VAA_03340 2cf3305ab52a1963e225dfd5694ec373 265 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VAA_03340 2cf3305ab52a1963e225dfd5694ec373 265 SUPERFAMILY SSF56752 1 260 2.09E-68 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VAA_03340 2cf3305ab52a1963e225dfd5694ec373 265 Gene3D G3DSA:3.20.10.10 111 265 4.0E-51 T 13-10-2018 VAA_03340 2cf3305ab52a1963e225dfd5694ec373 265 Pfam PF01063 Amino-transferase class IV 24 245 1.3E-42 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VAA_03340 2cf3305ab52a1963e225dfd5694ec373 265 Gene3D G3DSA:3.30.470.10 1 107 6.9E-27 T 13-10-2018 VAA_03340 2cf3305ab52a1963e225dfd5694ec373 265 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 261 4.8E-103 T 13-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VAA_01778 ddf6fe865962c658be3378be3753b4cf 103 Gene3D G3DSA:1.10.1580.20 16 103 3.3E-44 T 13-10-2018 IPR038134 YihD-like superfamily VAA_01778 ddf6fe865962c658be3378be3753b4cf 103 Pfam PF06288 Protein of unknown function (DUF1040) 16 101 9.5E-46 T 13-10-2018 IPR009383 Protein of unknown function DUF1040 VAA_01778 ddf6fe865962c658be3378be3753b4cf 103 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 16 102 1.0E-35 T 13-10-2018 IPR009383 Protein of unknown function DUF1040 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Pfam PF00128 Alpha amylase, catalytic domain 1570 1664 1.7E-25 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Pfam PF00128 Alpha amylase, catalytic domain 1694 1870 4.5E-13 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF51011 1933 2012 6.48E-7 T 13-10-2018 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:2.60.40.1130 519 629 5.6E-18 T 13-10-2018 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:4.10.1080.10 195 322 2.0E-9 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Pfam PF11852 Domain of unknown function (DUF3372) 1236 1398 5.0E-56 T 13-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SMART SM00642 1544 1924 2.3E-30 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:2.60.40.10 635 743 2.9E-27 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Pfam PF03714 Bacterial pullanase-associated domain 406 508 7.0E-17 T 13-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF51445 1536 1933 3.09E-65 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:3.20.20.80 744 1329 2.6E-206 T 13-10-2018 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 642 729 5.0E-14 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF103647 300 394 2.75E-11 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF103647 224 319 1.7E-9 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:2.60.40.1110 388 508 3.8E-29 T 13-10-2018 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:3.20.20.80 1533 1887 6.7E-72 T 13-10-2018 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF81296 510 630 4.2E-22 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF51445 742 1294 1.42E-126 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:2.60.40.1180 1330 1412 5.9E-23 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:2.60.40.10 1415 1499 2.5E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 520 1400 0.0 T 13-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF81296 641 744 1.36E-21 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF51011 1299 1411 3.93E-35 T 13-10-2018 VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 Gene3D G3DSA:2.60.40.1180 1927 2011 3.3E-9 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF81296 1418 1464 1.73E-5 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_03053 2d40e533f89ef0f3680791f350c501a3 2013 SUPERFAMILY SSF49452 397 506 5.56E-28 T 13-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 SUPERFAMILY SSF52343 229 361 5.37E-28 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 SUPERFAMILY SSF63380 121 230 1.87E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 166 1.3E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 257 1.3E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00410 Phenol hydroxylase reductase family signature 326 334 1.3E-6 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 Gene3D G3DSA:1.10.490.10 1 113 3.1E-41 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 326 334 2.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 164 2.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 257 2.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 175 182 2.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 203 212 2.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 Pfam PF00175 Oxidoreductase NAD-binding domain 239 339 5.4E-12 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 Pfam PF00970 Oxidoreductase FAD-binding domain 126 230 1.5E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 Pfam PF00042 Globin 1 71 1.4E-7 T 13-10-2018 IPR000971 Globin GO:0020037 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 Gene3D G3DSA:2.40.30.10 121 230 1.5E-33 T 13-10-2018 VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 SUPERFAMILY SSF46458 1 113 2.66E-31 T 13-10-2018 IPR009050 Globin-like superfamily VAA_00966 fa20464c46ebef2abfe04db0bf10091d 364 Gene3D G3DSA:3.40.50.80 232 363 1.5E-27 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 691 25.945 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 Pfam PF05746 DALR anticodon binding domain 585 682 3.4E-9 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 7.8E-205 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 SUPERFAMILY SSF109604 355 494 9.63E-13 T 13-10-2018 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 9.7E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 9.7E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 398 417 9.7E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 9.7E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 322 338 9.7E-37 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00854 4fccef4d27d31f74d03f6e5213c0b6c2 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 692 8.9E-294 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_02908 21d8a33e860386edc9f27e7086449dea 376 SUPERFAMILY SSF111369 61 115 4.18E-7 T 13-10-2018 VAA_02908 21d8a33e860386edc9f27e7086449dea 376 Gene3D G3DSA:1.10.287.470 96 219 1.3E-35 T 13-10-2018 VAA_02908 21d8a33e860386edc9f27e7086449dea 376 Gene3D G3DSA:2.40.30.170 257 345 1.3E-35 T 13-10-2018 VAA_02908 21d8a33e860386edc9f27e7086449dea 376 Gene3D G3DSA:2.40.50.100 62 255 1.3E-35 T 13-10-2018 VAA_02908 21d8a33e860386edc9f27e7086449dea 376 SUPERFAMILY SSF111369 129 260 5.1E-6 T 13-10-2018 VAA_02908 21d8a33e860386edc9f27e7086449dea 376 Pfam PF13533 Biotin-lipoyl like 65 111 3.1E-10 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAA_02483 ec3a7a67fc365728d966361899a4e497 199 Pfam PF13808 DDE_Tnp_1-associated 9 95 1.4E-27 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal VAA_02483 ec3a7a67fc365728d966361899a4e497 199 Pfam PF01609 Transposase DDE domain 103 199 4.5E-13 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VAA_02559 be4cad618458c9900916a08e12a77f5f 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-36 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VAA_02559 be4cad618458c9900916a08e12a77f5f 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.964 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VAA_02559 be4cad618458c9900916a08e12a77f5f 154 Gene3D G3DSA:3.30.70.140 1 100 5.0E-36 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VAA_02559 be4cad618458c9900916a08e12a77f5f 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 6.4E-18 T 13-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VAA_02559 be4cad618458c9900916a08e12a77f5f 154 SUPERFAMILY SSF57825 101 151 2.88E-15 T 13-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VAA_02559 be4cad618458c9900916a08e12a77f5f 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.5E-30 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VAA_02559 be4cad618458c9900916a08e12a77f5f 154 SUPERFAMILY SSF54893 2 100 6.15E-36 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VAA_02559 be4cad618458c9900916a08e12a77f5f 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 9.3E-60 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VAA_02559 be4cad618458c9900916a08e12a77f5f 154 Gene3D G3DSA:2.30.30.20 101 153 6.7E-23 T 13-10-2018 VAA_02424 578190baf5941a917fc4554873585dd6 294 SMART SM00382 59 247 5.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02424 578190baf5941a917fc4554873585dd6 294 Pfam PF00005 ABC transporter 54 199 1.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02424 578190baf5941a917fc4554873585dd6 294 SUPERFAMILY SSF52540 25 254 1.11E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02424 578190baf5941a917fc4554873585dd6 294 Gene3D G3DSA:3.40.50.300 31 289 2.2E-60 T 13-10-2018 VAA_02424 578190baf5941a917fc4554873585dd6 294 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 169 8.6E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 SUPERFAMILY SSF88946 4 105 9.42E-21 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 SUPERFAMILY SSF88659 112 170 6.11E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 Gene3D G3DSA:1.10.1740.10 8 85 7.4E-19 T 13-10-2018 VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 Pfam PF08281 Sigma-70, region 4 113 165 4.2E-12 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 Pfam PF04542 Sigma-70 region 2 27 92 3.3E-12 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_02239 d2cf3c5841a6acd45e80ad47dcff8eb1 171 Gene3D G3DSA:1.10.10.10 86 170 2.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.8E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 Pfam PF03466 LysR substrate binding domain 89 293 1.7E-36 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 SUPERFAMILY SSF46785 4 112 8.61E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 Gene3D G3DSA:3.40.190.10 164 264 2.8E-59 T 13-10-2018 VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 SUPERFAMILY SSF53850 90 293 1.16E-36 T 13-10-2018 VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 Gene3D G3DSA:3.40.190.10 92 289 2.8E-59 T 13-10-2018 VAA_00991 38f5224e548b4caa6c7672d860a4fc62 301 Gene3D G3DSA:1.10.10.10 4 90 2.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03051 e6ee2ada7f6306d642a3ba67a09a7e1c 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 334 4.2E-38 T 13-10-2018 IPR000160 GGDEF domain VAA_03051 e6ee2ada7f6306d642a3ba67a09a7e1c 353 Gene3D G3DSA:3.30.70.270 177 346 3.7E-47 T 13-10-2018 VAA_03051 e6ee2ada7f6306d642a3ba67a09a7e1c 353 SMART SM00267 168 336 2.8E-49 T 13-10-2018 IPR000160 GGDEF domain VAA_03051 e6ee2ada7f6306d642a3ba67a09a7e1c 353 SUPERFAMILY SSF55073 184 335 1.8E-40 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03051 e6ee2ada7f6306d642a3ba67a09a7e1c 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 332 1.0E-34 T 13-10-2018 IPR000160 GGDEF domain VAA_01467 0b5dba5299156332ca5bcf0f511559c8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.4E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01467 0b5dba5299156332ca5bcf0f511559c8 303 Gene3D G3DSA:3.40.190.290 95 293 8.4E-50 T 13-10-2018 VAA_01467 0b5dba5299156332ca5bcf0f511559c8 303 Gene3D G3DSA:1.10.10.10 5 93 8.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01467 0b5dba5299156332ca5bcf0f511559c8 303 Pfam PF03466 LysR substrate binding domain 91 292 9.0E-38 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_01467 0b5dba5299156332ca5bcf0f511559c8 303 SUPERFAMILY SSF46785 3 112 1.03E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01467 0b5dba5299156332ca5bcf0f511559c8 303 SUPERFAMILY SSF53850 91 297 1.99E-37 T 13-10-2018 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 SUPERFAMILY SSF51604 24 139 9.89E-10 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.4E-124 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 Gene3D G3DSA:3.30.413.10 262 360 1.5E-24 T 13-10-2018 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 34.66 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 SUPERFAMILY SSF56014 265 354 5.89E-11 T 13-10-2018 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 Gene3D G3DSA:3.20.20.20 1 261 1.4E-104 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 PIRSF PIRSF004640 1 364 1.1E-145 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAA_00508 192f3f82beb505c6610ad26f9bc3ac93 374 Pfam PF04551 GcpE protein 14 354 3.3E-132 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VAA_03477 2b6fea3cc05ea1c1e24c9c48ead948d1 115 SUPERFAMILY SSF52833 2 114 2.71E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03477 2b6fea3cc05ea1c1e24c9c48ead948d1 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 9.0E-32 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VAA_03477 2b6fea3cc05ea1c1e24c9c48ead948d1 115 Pfam PF03960 ArsC family 6 113 5.3E-17 T 13-10-2018 IPR006660 Arsenate reductase-like VAA_03477 2b6fea3cc05ea1c1e24c9c48ead948d1 115 Gene3D G3DSA:3.40.30.10 2 115 2.0E-41 T 13-10-2018 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 Pfam PF00171 Aldehyde dehydrogenase family 16 474 6.4E-175 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 SUPERFAMILY SSF53720 4 477 5.76E-170 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 7.1E-202 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 Gene3D G3DSA:3.40.309.10 251 444 8.8E-179 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.321 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAA_01522 b386acbb5db1c67039256a6f4b47daa0 486 Gene3D G3DSA:3.40.605.10 8 472 8.8E-179 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_02335 44c69d358b09fe213150833dcc16c661 648 SUPERFAMILY SSF52540 43 603 1.36E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02335 44c69d358b09fe213150833dcc16c661 648 SUPERFAMILY SSF52540 16 236 5.78E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02335 44c69d358b09fe213150833dcc16c661 648 Pfam PF00270 DEAD/DEAH box helicase 30 83 2.2E-5 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02335 44c69d358b09fe213150833dcc16c661 648 SMART SM00491 478 607 1.0E-45 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAA_02335 44c69d358b09fe213150833dcc16c661 648 Gene3D G3DSA:3.40.50.300 20 286 3.7E-50 T 13-10-2018 VAA_02335 44c69d358b09fe213150833dcc16c661 648 Gene3D G3DSA:3.40.50.300 446 639 1.0E-37 T 13-10-2018 VAA_02335 44c69d358b09fe213150833dcc16c661 648 SMART SM00487 18 300 0.0065 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02335 44c69d358b09fe213150833dcc16c661 648 Pfam PF13307 Helicase C-terminal domain 463 620 7.2E-35 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAA_02741 228080dfae4ee46c5e77291d43d1cc4e 166 Pfam PF03968 OstA-like protein 30 141 3.8E-29 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VAA_02741 228080dfae4ee46c5e77291d43d1cc4e 166 Gene3D G3DSA:2.60.450.10 20 157 3.5E-38 T 13-10-2018 VAA_02741 228080dfae4ee46c5e77291d43d1cc4e 166 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 23.565 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VAA_02741 228080dfae4ee46c5e77291d43d1cc4e 166 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 4.0E-46 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VAA_03792 380c858d9a9c8877c375c595c08cdfc0 214 Gene3D G3DSA:3.40.50.10420 17 213 8.3E-55 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VAA_03792 380c858d9a9c8877c375c595c08cdfc0 214 SUPERFAMILY SSF100950 22 212 1.12E-55 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_03792 380c858d9a9c8877c375c595c08cdfc0 214 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 24 206 1.0E-44 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VAA_03792 380c858d9a9c8877c375c595c08cdfc0 214 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 24 206 9.4E-53 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VAA_03792 380c858d9a9c8877c375c595c08cdfc0 214 PIRSF PIRSF006806 18 209 6.8E-37 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VAA_02480 67f9b180acbc459ce88780a3f9e10792 268 Pfam PF01061 ABC-2 type transporter 18 225 1.6E-27 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VAA_03204 75e507bb5fdfb08a35ae8cb8351c5693 228 Pfam PF00005 ABC transporter 24 172 1.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03204 75e507bb5fdfb08a35ae8cb8351c5693 228 Gene3D G3DSA:3.40.50.300 1 228 1.4E-66 T 13-10-2018 VAA_03204 75e507bb5fdfb08a35ae8cb8351c5693 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03204 75e507bb5fdfb08a35ae8cb8351c5693 228 SUPERFAMILY SSF52540 4 226 3.19E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03204 75e507bb5fdfb08a35ae8cb8351c5693 228 SMART SM00382 33 221 8.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03204 75e507bb5fdfb08a35ae8cb8351c5693 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.5E-109 T 13-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VAA_02501 1fd17199122a16cc3effa962e3da4a01 362 Gene3D G3DSA:3.90.550.10 2 256 1.8E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02501 1fd17199122a16cc3effa962e3da4a01 362 Pfam PF00535 Glycosyl transferase family 2 12 168 2.5E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_02501 1fd17199122a16cc3effa962e3da4a01 362 SUPERFAMILY SSF53448 9 232 7.97E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 Gene3D G3DSA:1.10.287.950 318 620 6.5E-90 T 13-10-2018 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 Pfam PF00672 HAMP domain 321 367 1.5E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 587 2.1E-55 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 SMART SM00304 546 595 72.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 SMART SM00304 319 371 1.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 SMART SM00283 372 619 5.2E-95 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 1.0E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 528 1.0E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 576 1.0E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 497 1.0E-53 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 Gene3D G3DSA:3.30.450.20 28 150 1.4E-30 T 13-10-2018 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 Gene3D G3DSA:3.30.450.20 155 274 1.9E-32 T 13-10-2018 VAA_01905 1bd4ff6ba3ee74afa57a74099bb78e6c 672 SUPERFAMILY SSF58104 339 620 2.49E-76 T 13-10-2018 VAA_03212 c4c628a5c3a4cb55f65b478b80529385 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.9E-69 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VAA_03212 c4c628a5c3a4cb55f65b478b80529385 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.147 T 13-10-2018 IPR022987 Uncharacterised protein family UPF0227 VAA_03212 c4c628a5c3a4cb55f65b478b80529385 180 SUPERFAMILY SSF53474 2 176 1.24E-5 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03212 c4c628a5c3a4cb55f65b478b80529385 180 Gene3D G3DSA:3.40.50.1820 1 180 1.1E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 Pfam PF08521 Two-component sensor kinase N-terminal 24 177 5.5E-10 T 13-10-2018 IPR013727 Two-component sensor kinase, N-terminal VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 457 7.8E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 Gene3D G3DSA:1.10.287.130 205 316 1.9E-18 T 13-10-2018 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 3.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 3.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 SUPERFAMILY SSF47384 237 318 1.12E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 SMART SM00388 254 319 8.0E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 SUPERFAMILY SSF55874 325 469 4.71E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 Gene3D G3DSA:3.30.565.10 317 469 2.7E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 3.0E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03292 941bf005b444fc9dbdb37fce3592816d 470 SMART SM00387 362 470 5.6E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03620 1d7b9d961324e394608ba59f059917c3 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 177 2.6E-43 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03620 1d7b9d961324e394608ba59f059917c3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 3.7E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03620 1d7b9d961324e394608ba59f059917c3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 3.7E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03620 1d7b9d961324e394608ba59f059917c3 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 3.7E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03620 1d7b9d961324e394608ba59f059917c3 181 Gene3D G3DSA:2.40.100.10 18 181 7.4E-60 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_03620 1d7b9d961324e394608ba59f059917c3 181 SUPERFAMILY SSF50891 19 179 2.19E-54 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_03620 1d7b9d961324e394608ba59f059917c3 181 PIRSF PIRSF001467 7 180 4.3E-25 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VAA_03620 1d7b9d961324e394608ba59f059917c3 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VAA_03097 c2c5b123a0ed400ffd816b91b401af6e 120 Pfam PF03788 LrgA family 19 109 1.3E-25 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 VAA_00486 49677fbbce42affe04e2027fe2a6601c 357 Pfam PF14350 Beta protein 6 346 1.1E-68 T 13-10-2018 IPR025683 Protein beta VAA_03198 297abf7812aed9643415dd62e9fb319c 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.084 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 VAA_03198 297abf7812aed9643415dd62e9fb319c 59 SUPERFAMILY SSF158997 1 54 2.49E-20 T 13-10-2018 VAA_03198 297abf7812aed9643415dd62e9fb319c 59 Pfam PF03966 Trm112p-like protein 2 41 7.2E-11 T 13-10-2018 IPR005651 Trm112-like VAA_03198 297abf7812aed9643415dd62e9fb319c 59 Gene3D G3DSA:2.20.25.10 8 59 1.4E-23 T 13-10-2018 VAA_03668 894721e364af9bb135c464b8437115e2 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.4E-119 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAA_03668 894721e364af9bb135c464b8437115e2 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.457 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAA_03668 894721e364af9bb135c464b8437115e2 239 Gene3D G3DSA:3.40.50.1580 1 238 1.1E-77 T 13-10-2018 VAA_03668 894721e364af9bb135c464b8437115e2 239 SUPERFAMILY SSF53167 3 235 8.9E-93 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAA_03668 894721e364af9bb135c464b8437115e2 239 Pfam PF01048 Phosphorylase superfamily 15 222 1.9E-40 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAA_03668 894721e364af9bb135c464b8437115e2 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Pfam PF00158 Sigma-54 interaction domain 206 370 2.6E-56 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Gene3D G3DSA:3.40.50.300 197 375 6.6E-57 T 13-10-2018 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Gene3D G3DSA:3.30.450.20 82 186 4.8E-21 T 13-10-2018 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Gene3D G3DSA:1.10.8.60 376 452 9.3E-16 T 13-10-2018 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Gene3D G3DSA:3.30.70.260 1 80 2.0E-26 T 13-10-2018 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.3E-28 T 13-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 SMART SM00382 225 368 3.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Gene3D G3DSA:1.10.10.60 458 513 1.7E-25 T 13-10-2018 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 Pfam PF00989 PAS fold 84 130 1.8E-5 T 13-10-2018 IPR013767 PAS fold GO:0006355 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 SMART SM00091 80 146 7.3E-7 T 13-10-2018 IPR000014 PAS domain VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 SUPERFAMILY SSF55785 83 168 1.58E-9 T 13-10-2018 IPR035965 PAS domain superfamily VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 SUPERFAMILY SSF52540 205 443 3.55E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 SUPERFAMILY SSF46689 460 512 5.5E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01434 161825e73b137c782d5752bc47ea2b1e 514 SUPERFAMILY SSF55021 1 68 9.16E-7 T 13-10-2018 VAA_01825 8c4909d4344e050759ac5ccb2afad72b 539 Pfam PF07730 Histidine kinase 336 400 1.3E-11 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VAA_01825 8c4909d4344e050759ac5ccb2afad72b 539 SMART SM00387 439 533 1.1E-4 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01825 8c4909d4344e050759ac5ccb2afad72b 539 SUPERFAMILY SSF55874 415 530 3.41E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01825 8c4909d4344e050759ac5ccb2afad72b 539 Gene3D G3DSA:3.30.565.10 404 531 2.0E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01825 8c4909d4344e050759ac5ccb2afad72b 539 Pfam PF05231 MASE1 24 300 3.4E-30 T 13-10-2018 IPR007895 MASE1 VAA_03506 804c242f807b4c58831fa3eb789f6480 194 Gene3D G3DSA:3.30.70.890 66 184 7.2E-28 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAA_03506 804c242f807b4c58831fa3eb789f6480 194 Gene3D G3DSA:3.30.230.10 1 64 2.4E-22 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03506 804c242f807b4c58831fa3eb789f6480 194 Pfam PF08544 GHMP kinases C terminal 101 162 1.1E-6 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain VAA_03506 804c242f807b4c58831fa3eb789f6480 194 SUPERFAMILY SSF55060 66 181 6.23E-36 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAA_03506 804c242f807b4c58831fa3eb789f6480 194 Pfam PF00288 GHMP kinases N terminal domain 1 49 1.8E-6 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VAA_03506 804c242f807b4c58831fa3eb789f6480 194 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 183 1.4E-62 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VAA_03506 804c242f807b4c58831fa3eb789f6480 194 SUPERFAMILY SSF54211 1 62 8.35E-17 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Pfam PF08275 DNA primase catalytic core, N-terminal domain 131 255 4.1E-41 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 1.6E-35 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 SUPERFAMILY SSF56731 120 428 8.37E-111 T 13-10-2018 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Gene3D G3DSA:1.10.860.10 438 580 1.4E-56 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Pfam PF13155 Toprim-like 268 355 1.7E-13 T 13-10-2018 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 1.3E-148 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 SMART SM00400 36 90 7.2E-37 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Pfam PF01807 CHC2 zinc finger 6 101 2.3E-41 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 PIRSF PIRSF002811 2 580 2.2E-143 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Pfam PF10410 DnaB-helicase binding domain of primase 375 426 6.5E-9 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 SUPERFAMILY SSF117023 447 578 7.72E-45 T 13-10-2018 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Gene3D G3DSA:3.40.1360.10 246 372 9.8E-41 T 13-10-2018 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Hamap MF_00974 DNA primase [dnaG]. 4 576 29.289 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Gene3D G3DSA:3.90.580.10 1 102 1.3E-39 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 SUPERFAMILY SSF57783 4 101 5.44E-38 T 13-10-2018 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Gene3D G3DSA:1.20.50.20 373 429 3.7E-16 T 13-10-2018 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 SMART SM00766 450 575 3.6E-53 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VAA_00678 e3c44792e95cc26adb85517827e25d73 580 Gene3D G3DSA:3.90.980.10 120 245 6.4E-45 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VAA_00678 e3c44792e95cc26adb85517827e25d73 580 SMART SM00493 264 335 2.0E-19 T 13-10-2018 IPR006171 TOPRIM domain VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 SUPERFAMILY SSF56784 532 838 3.04E-60 T 13-10-2018 IPR036412 HAD-like superfamily VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Gene3D G3DSA:2.70.150.20 320 436 2.6E-38 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 265 841 4.5E-181 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 709 726 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 250 269 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 123 137 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 322 340 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 455 469 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 517 532 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00943 Copper-transporting ATPase signature 805 819 1.1E-13 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 751 1.6E-28 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 668 1.6E-28 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 755 767 1.6E-28 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 382 396 1.6E-28 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 548 1.6E-28 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 689 1.6E-28 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Gene3D G3DSA:3.40.50.1000 515 784 1.8E-93 T 13-10-2018 IPR023214 HAD superfamily VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 SUPERFAMILY SSF55008 104 177 1.09E-16 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Gene3D G3DSA:3.30.70.100 109 176 3.9E-17 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Pfam PF00702 haloacid dehalogenase-like hydrolase 530 746 1.1E-46 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 SUPERFAMILY SSF55008 7 73 1.03E-6 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 SUPERFAMILY SSF81665 300 799 1.27E-9 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 SUPERFAMILY SSF81653 335 432 2.75E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 246 842 8.9E-180 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Pfam PF00122 E1-E2 ATPase 333 513 3.3E-49 T 13-10-2018 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 304 810 7.2E-92 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Pfam PF00403 Heavy-metal-associated domain 113 171 7.2E-12 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 536 542 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 ProSitePatterns PS01047 Heavy-metal-associated domain. 113 142 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VAA_03537 d0cab7a12b255dc96d2d7f3077b1de77 850 Gene3D G3DSA:3.40.1110.10 545 664 1.8E-93 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 Gene3D G3DSA:3.30.450.20 53 271 7.2E-51 T 13-10-2018 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 595 2.8E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 Pfam PF02743 Cache domain 39 260 2.2E-24 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 SMART SM00283 367 628 1.6E-72 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 SUPERFAMILY SSF58104 320 629 2.09E-77 T 13-10-2018 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 Gene3D G3DSA:1.10.287.950 298 629 2.6E-70 T 13-10-2018 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 Gene3D G3DSA:3.30.450.20 64 171 7.2E-51 T 13-10-2018 VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 SUPERFAMILY SSF103190 66 171 1.05E-9 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_01927 d13dd80f867f975b30ecbd07fdc98d00 629 SMART SM00304 295 352 2.1E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 SMART SM00764 147 333 3.3E-129 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 SUPERFAMILY SSF55729 35 115 2.84E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 Pfam PF13673 Acetyltransferase (GNAT) domain 36 111 7.0E-7 T 13-10-2018 IPR000182 GNAT domain VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 Gene3D G3DSA:3.40.50.620 145 328 1.1E-22 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 SUPERFAMILY SSF52374 146 334 2.6E-25 T 13-10-2018 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 PIRSF PIRSF005751 1 350 6.0E-135 T 13-10-2018 IPR005216 Citrate lyase ligase GO:0008771 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 5.2E-82 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 335 1.1E-141 T 13-10-2018 IPR005216 Citrate lyase ligase GO:0008771 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 Gene3D G3DSA:3.40.630.30 7 127 3.4E-9 T 13-10-2018 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 338 2.0E-74 T 13-10-2018 VAA_02016 a353e30363652acfe3d40c51ad5d5fe1 363 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 204 1.8E-12 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_01040 08b36f37862a40a81dcf552c758b53be 344 SUPERFAMILY SSF56925 180 344 1.26E-5 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAA_01040 08b36f37862a40a81dcf552c758b53be 344 Pfam PF16941 Putative cyclodextrin porin 1 344 3.0E-219 T 13-10-2018 IPR031609 Cyclodextrin porin CymA GO:0098657 VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 Gene3D G3DSA:1.20.1560.10 7 336 1.2E-24 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 SMART SM00382 386 577 5.8E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 Pfam PF00664 ABC transporter transmembrane region 42 308 1.1E-15 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 SUPERFAMILY SSF90123 29 342 9.55E-47 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 Pfam PF00005 ABC transporter 379 531 9.2E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 SUPERFAMILY SSF52540 351 601 4.55E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02422 e5d7ab7253ddc8de0f49a5f271d873c0 610 Gene3D G3DSA:3.40.50.300 351 604 1.2E-91 T 13-10-2018 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 17 97 1.6E-19 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Hamap MF_00123 Arginine--tRNA ligase [argS]. 15 588 27.934 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 SUPERFAMILY SSF47323 466 588 2.94E-35 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Gene3D G3DSA:3.30.1360.70 9 116 1.5E-32 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 143 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 SMART SM00836 472 588 5.7E-40 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 SUPERFAMILY SSF55190 10 116 2.22E-22 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Pfam PF00750 tRNA synthetases class I (R) 110 458 9.0E-161 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 SMART SM01016 15 97 1.0E-27 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 SUPERFAMILY SSF52374 120 465 1.39E-94 T 13-10-2018 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Pfam PF05746 DALR anticodon binding domain 472 588 2.0E-36 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 588 1.1E-200 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 3.8E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 3.8E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 PRINTS PR01038 Arginyl-tRNA synthetase signature 315 336 3.8E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 3.8E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Gene3D G3DSA:3.40.50.620 118 465 5.3E-109 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_03396 8e02c02418441f67a6b4514ed3ea52b6 588 Gene3D G3DSA:1.10.730.10 466 588 9.8E-36 T 13-10-2018 VAA_02349 702c518b0cd38ef034371d5157c99b2f 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.334 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VAA_02349 702c518b0cd38ef034371d5157c99b2f 146 PIRSF PIRSF006173 1 144 6.4E-65 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VAA_02349 702c518b0cd38ef034371d5157c99b2f 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 3.9E-8 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 Pfam PF00342 Phosphoglucose isomerase 104 593 5.1E-254 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 317 330 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 PRINTS PR00662 Glucose-6-phosphate isomerase signature 549 562 1.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 PRINTS PR00662 Glucose-6-phosphate isomerase signature 390 411 1.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 PRINTS PR00662 Glucose-6-phosphate isomerase signature 535 549 1.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 PRINTS PR00662 Glucose-6-phosphate isomerase signature 517 535 1.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 PRINTS PR00662 Glucose-6-phosphate isomerase signature 313 331 1.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 PRINTS PR00662 Glucose-6-phosphate isomerase signature 202 221 1.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 Gene3D G3DSA:1.10.1390.10 559 599 2.9E-20 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 SUPERFAMILY SSF53697 57 599 2.59E-225 T 13-10-2018 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 Gene3D G3DSA:3.40.50.10490 150 343 5.3E-242 T 13-10-2018 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 Gene3D G3DSA:3.40.50.10490 64 558 5.3E-242 T 13-10-2018 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 98 576 43.043 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00264 b2cdbe4b1a751664657f11a7d0587997 601 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 549 566 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Gene3D G3DSA:3.10.20.30 507 605 1.0E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 SUPERFAMILY SSF52343 368 508 1.96E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 SUPERFAMILY SSF63380 279 379 1.7E-26 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 SUPERFAMILY SSF50800 4 264 5.75E-17 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 SUPERFAMILY SSF54292 502 604 4.85E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 4.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 4.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 4.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 4.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Pfam PF03473 MOSC domain 139 262 1.8E-30 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Pfam PF03476 MOSC N-terminal beta barrel domain 4 118 3.6E-28 T 13-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 1.8E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 7.2E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 7.2E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 7.2E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 7.2E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 7.2E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Gene3D G3DSA:2.40.30.10 278 378 5.0E-25 T 13-10-2018 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Gene3D G3DSA:3.40.50.80 381 506 2.4E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 532 597 8.3E-14 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 2.3E-15 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAA_00971 e28a1d25ec24433ce2148239c7abaef3 605 SUPERFAMILY SSF141673 6 133 2.09E-28 T 13-10-2018 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 PIRSF PIRSF002888 1 328 6.2E-92 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.3E-82 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 1.2E-121 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 5.9E-17 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.2E-18 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.2E-18 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.2E-18 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.2E-18 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 SUPERFAMILY SSF101801 247 323 1.23E-13 T 13-10-2018 IPR036429 SpoA-like superfamily VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 SUPERFAMILY SSF103039 4 230 1.74E-22 T 13-10-2018 IPR028976 CheC-like superfamily VAA_03449 9f584e58941f52482ad7c82ab6f6fd49 350 Gene3D G3DSA:3.40.1550.10 43 230 2.6E-55 T 13-10-2018 IPR028976 CheC-like superfamily VAA_03590 612b8820403838a9789b144ad396832d 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.429 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VAA_03590 612b8820403838a9789b144ad396832d 149 Pfam PF03477 ATP cone domain 50 136 6.0E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VAA_03590 612b8820403838a9789b144ad396832d 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 7.3E-73 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VAA_03278 60366cf7d4af92858472be5ed4292e01 461 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 19 460 1.2E-106 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAA_03278 60366cf7d4af92858472be5ed4292e01 461 Pfam PF02447 GntP family permease 17 459 5.2E-119 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAA_03278 60366cf7d4af92858472be5ed4292e01 461 PIRSF PIRSF002746 11 461 5.0E-147 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAA_02618 68f5d769aff17c6248487791849c42be 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 332 3.8E-119 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02618 68f5d769aff17c6248487791849c42be 333 Gene3D G3DSA:3.30.360.10 153 311 2.0E-119 T 13-10-2018 VAA_02618 68f5d769aff17c6248487791849c42be 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 310 9.9E-11 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02618 68f5d769aff17c6248487791849c42be 333 SMART SM00859 3 146 2.2E-48 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAA_02618 68f5d769aff17c6248487791849c42be 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 333 37.987 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02618 68f5d769aff17c6248487791849c42be 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 4.7E-33 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAA_02618 68f5d769aff17c6248487791849c42be 333 SUPERFAMILY SSF51735 1 173 1.04E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02618 68f5d769aff17c6248487791849c42be 333 SUPERFAMILY SSF55347 154 307 2.88E-48 T 13-10-2018 VAA_02618 68f5d769aff17c6248487791849c42be 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02618 68f5d769aff17c6248487791849c42be 333 Gene3D G3DSA:3.40.50.720 6 328 2.0E-119 T 13-10-2018 VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 451 5.6E-76 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 PIRSF PIRSF002741 4 539 1.0E-68 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 Gene3D G3DSA:3.40.190.10 43 539 1.9E-194 T 13-10-2018 VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 Gene3D G3DSA:3.10.105.10 268 515 1.9E-194 T 13-10-2018 VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 SUPERFAMILY SSF53850 36 540 1.03E-105 T 13-10-2018 VAA_00780 639dcdb363fc9bec7aaf81686b7c60b9 556 Gene3D G3DSA:3.90.76.10 62 168 1.9E-194 T 13-10-2018 VAA_01335 b2ecd72c9838be790fce26b7037f1a48 113 Gene3D G3DSA:1.10.287.950 4 112 1.2E-6 T 13-10-2018 VAA_01335 b2ecd72c9838be790fce26b7037f1a48 113 SUPERFAMILY SSF58104 10 112 1.7E-10 T 13-10-2018 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 Pfam PF00293 NUDIX domain 15 135 1.3E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 PRINTS PR00502 NUDIX hydrolase family signature 57 72 3.7E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 PRINTS PR00502 NUDIX hydrolase family signature 43 57 3.7E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 Gene3D G3DSA:3.90.79.10 7 141 4.2E-40 T 13-10-2018 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 TIGRFAM TIGR00586 mutt: mutator mutT protein 10 136 1.6E-39 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VAA_03707 2c2ca93e65bc7da6cf80b24f9c9d9622 141 SUPERFAMILY SSF55811 10 137 2.98E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_00214 109f9758e6c87bf48c8401eaf2158900 181 SUPERFAMILY SSF55729 7 173 1.51E-40 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00214 109f9758e6c87bf48c8401eaf2158900 181 Pfam PF13302 Acetyltransferase (GNAT) domain 12 149 1.5E-18 T 13-10-2018 IPR000182 GNAT domain VAA_00214 109f9758e6c87bf48c8401eaf2158900 181 Gene3D G3DSA:3.40.630.30 2 173 1.5E-43 T 13-10-2018 VAA_04289 0443badd078c4de769b88cce7c26196a 484 SUPERFAMILY SSF47384 271 342 1.02E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_04289 0443badd078c4de769b88cce7c26196a 484 SMART SM00387 381 479 1.2E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_04289 0443badd078c4de769b88cce7c26196a 484 Gene3D G3DSA:3.30.565.10 341 476 9.6E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_04289 0443badd078c4de769b88cce7c26196a 484 Pfam PF11884 Domain of unknown function (DUF3404) 18 275 9.1E-112 T 13-10-2018 IPR021821 Protein of unknown function DUF3404 VAA_04289 0443badd078c4de769b88cce7c26196a 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 4.0E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_04289 0443badd078c4de769b88cce7c26196a 484 SMART SM00388 276 343 1.7E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_04289 0443badd078c4de769b88cce7c26196a 484 Gene3D G3DSA:1.10.287.130 283 340 9.6E-18 T 13-10-2018 VAA_04289 0443badd078c4de769b88cce7c26196a 484 SUPERFAMILY SSF55874 347 480 1.02E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 SUPERFAMILY SSF158842 1885 2022 2.88E-32 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:1.20.140.180 2042 2170 4.9E-41 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:3.90.1760.10 2482 2633 6.9E-24 T 13-10-2018 IPR037017 Anthrax toxin, edema factor, central domain superfamily GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF11713 Peptidase C80 family 3074 3231 7.8E-53 T 13-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:2.160.20.160 3759 4039 9.1E-21 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF11647 Membrane Localization Domain 1901 1969 1.8E-22 T 13-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF11647 Membrane Localization Domain 2049 2112 4.2E-22 T 13-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:2.60.120.260 1281 1420 3.0E-5 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF03496 ADP-ribosyltransferase exoenzyme 2216 2361 3.9E-8 T 13-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:3.90.176.10 2171 2368 3.5E-26 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:3.40.50.11050 3034 3255 7.0E-90 T 13-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 SUPERFAMILY SSF56399 2202 2361 2.14E-19 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Gene3D G3DSA:1.20.58.1190 1896 1988 2.8E-23 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1133 1150 19.0 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1060 1074 33.0 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 849 861 0.34 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 676 692 0.41 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 25 42 0.45 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 905 920 0.22 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 462 476 3.2 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 600 616 0.15 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 790 802 7.4 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 5 22 2.6 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1019 1035 0.0028 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 733 750 0.56 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 885 897 4.7 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 962 977 0.048 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 559 571 19.0 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1038 1054 2.9 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 928 940 5.5 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 442 459 0.0059 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1076 1093 0.011 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 619 634 0.044 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 771 786 0.13 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 422 438 19.0 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 577 589 2.1 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 638 653 0.07 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 657 673 0.18 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1114 1131 0.069 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 695 709 0.16 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 1002 1017 0.034 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 93 109 0.01 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 943 960 0.082 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 752 768 7.7 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 809 824 0.099 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 981 997 0.53 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 714 728 3.3 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 482 495 35.0 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF07634 RtxA repeat 73 90 2.9 T 13-10-2018 IPR011509 RtxA toxin VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 SUPERFAMILY SSF158842 2036 2156 1.83E-29 T 13-10-2018 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 SUPERFAMILY SSF81298 2455 2796 2.75E-66 T 13-10-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 SUPERFAMILY SSF51120 3879 4076 3.01E-12 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAA_03085 e1d027e38f763d12c9d81d695df21462 4157 Pfam PF03497 Anthrax toxin LF subunit 2456 2624 1.8E-29 T 13-10-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 VAA_01188 aed9182d36d04febbb5e0ac8fcc37881 280 Pfam PF00756 Putative esterase 23 272 5.1E-63 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VAA_01188 aed9182d36d04febbb5e0ac8fcc37881 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 278 6.0E-124 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 VAA_01188 aed9182d36d04febbb5e0ac8fcc37881 280 SUPERFAMILY SSF53474 3 279 1.09E-92 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01188 aed9182d36d04febbb5e0ac8fcc37881 280 Gene3D G3DSA:3.40.50.1820 3 280 2.9E-99 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02792 abcb86d5d58a17205184b2eb454e473f 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 121 2.6E-17 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAA_02792 abcb86d5d58a17205184b2eb454e473f 311 Gene3D G3DSA:3.30.360.10 121 311 2.0E-55 T 13-10-2018 VAA_02792 abcb86d5d58a17205184b2eb454e473f 311 Gene3D G3DSA:3.40.50.720 1 120 3.7E-28 T 13-10-2018 VAA_02792 abcb86d5d58a17205184b2eb454e473f 311 SUPERFAMILY SSF55347 123 266 1.73E-45 T 13-10-2018 VAA_02792 abcb86d5d58a17205184b2eb454e473f 311 SUPERFAMILY SSF51735 2 167 1.65E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01336 b3a570c736c503334b14b76272a32d20 350 Gene3D G3DSA:3.40.50.2300 178 307 5.8E-74 T 13-10-2018 VAA_01336 b3a570c736c503334b14b76272a32d20 350 SMART SM00354 20 90 3.7E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01336 b3a570c736c503334b14b76272a32d20 350 SUPERFAMILY SSF47413 20 78 4.55E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01336 b3a570c736c503334b14b76272a32d20 350 Gene3D G3DSA:3.40.50.2300 80 323 5.8E-74 T 13-10-2018 VAA_01336 b3a570c736c503334b14b76272a32d20 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 22 67 6.1E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01336 b3a570c736c503334b14b76272a32d20 350 SUPERFAMILY SSF53822 80 346 3.53E-74 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01336 b3a570c736c503334b14b76272a32d20 350 Pfam PF13377 Periplasmic binding protein-like domain 188 345 9.3E-36 T 13-10-2018 VAA_01336 b3a570c736c503334b14b76272a32d20 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 23 41 - T 13-10-2018 VAA_01336 b3a570c736c503334b14b76272a32d20 350 Gene3D G3DSA:1.10.260.40 18 79 3.8E-16 T 13-10-2018 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 313 331 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 83 103 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 222 241 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 334 353 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 149 169 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 279 298 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 11 34 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 38 57 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 PRINTS PR00166 Aromatic amino acid permease signature 183 205 5.9E-82 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 13-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 3.7E-109 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 382 1.2E-110 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VAA_01511 36c2eaa86ae2af8a80fa5ec60cd2b415 405 Gene3D G3DSA:1.20.1740.10 3 403 1.5E-12 T 13-10-2018 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 SUPERFAMILY SSF51445 330 618 6.03E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 PRINTS PR00132 Glycosyl hydrolase family 2 signature 371 389 3.2E-38 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 PRINTS PR00132 Glycosyl hydrolase family 2 signature 340 354 3.2E-38 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 PRINTS PR00132 Glycosyl hydrolase family 2 signature 443 458 3.2E-38 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 PRINTS PR00132 Glycosyl hydrolase family 2 signature 527 542 3.2E-38 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 3.2E-38 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 SMART SM01038 753 1027 2.9E-91 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 SUPERFAMILY SSF49303 219 329 4.6E-22 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1029 16.718 T 13-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 331 623 6.0E-113 T 13-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Pfam PF00703 Glycosyl hydrolases family 2 219 329 3.1E-14 T 13-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Pfam PF16353 Domain of unknown function(DUF4981) 638 723 8.2E-20 T 13-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 1.5E-55 T 13-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 SUPERFAMILY SSF49303 617 726 5.28E-25 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 SUPERFAMILY SSF49785 9 215 2.55E-65 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 SUPERFAMILY SSF74650 743 1026 7.06E-86 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Gene3D G3DSA:2.70.98.10 735 1028 2.8E-88 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Gene3D G3DSA:3.20.20.80 330 620 1.3E-123 T 13-10-2018 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Gene3D G3DSA:2.60.120.260 7 216 2.2E-82 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 443 457 - T 13-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Pfam PF02929 Beta galactosidase small chain 757 1025 5.8E-62 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Gene3D G3DSA:2.60.40.10 624 729 1.0E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_00466 00543a6add3bb234a1c3021246c55d10 1033 Gene3D G3DSA:2.60.40.10 218 329 8.7E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03307 4b194f2108bc1c9d0f3e72f3054497c5 355 SUPERFAMILY SSF53686 22 335 4.71E-71 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAA_03307 4b194f2108bc1c9d0f3e72f3054497c5 355 Gene3D G3DSA:3.40.50.1100 25 324 6.2E-67 T 13-10-2018 VAA_03307 4b194f2108bc1c9d0f3e72f3054497c5 355 Gene3D G3DSA:3.40.50.1100 51 157 6.2E-67 T 13-10-2018 VAA_03307 4b194f2108bc1c9d0f3e72f3054497c5 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 2.8E-42 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 289 4.5E-118 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 290 7.8E-110 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 Gene3D G3DSA:3.20.20.70 2 293 4.6E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 SMART SM01130 3 292 7.8E-138 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 SUPERFAMILY SSF51569 1 290 1.0E-97 T 13-10-2018 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 290 64.828 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 1.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 1.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.9E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 PIRSF PIRSF001365 1 292 5.1E-91 T 13-10-2018 IPR002220 DapA-like GO:0016829 VAA_03482 c97634a231b3f3f04a1332d05a40a94f 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VAA_02138 36942425e270dd7906c2fa28002367ac 331 SMART SM00382 32 238 2.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02138 36942425e270dd7906c2fa28002367ac 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.2E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_02138 36942425e270dd7906c2fa28002367ac 331 SUPERFAMILY SSF52540 3 268 1.6E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02138 36942425e270dd7906c2fa28002367ac 331 Pfam PF00005 ABC transporter 24 187 1.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02138 36942425e270dd7906c2fa28002367ac 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.2E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_02138 36942425e270dd7906c2fa28002367ac 331 Gene3D G3DSA:3.40.50.300 2 331 9.8E-73 T 13-10-2018 VAA_03191 79734fa99b0fe3531a919197e8170285 166 Pfam PF03887 YfbU domain 1 166 2.4E-69 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAA_03191 79734fa99b0fe3531a919197e8170285 166 Gene3D G3DSA:1.10.287.680 1 53 1.6E-33 T 13-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VAA_03191 79734fa99b0fe3531a919197e8170285 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.442 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAA_03191 79734fa99b0fe3531a919197e8170285 166 PIRSF PIRSF006272 1 166 7.3E-78 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAA_03191 79734fa99b0fe3531a919197e8170285 166 SUPERFAMILY SSF116960 1 166 7.32E-64 T 13-10-2018 VAA_03191 79734fa99b0fe3531a919197e8170285 166 Gene3D G3DSA:1.10.3190.10 54 166 3.5E-37 T 13-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VAA_03191 79734fa99b0fe3531a919197e8170285 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 2.0E-79 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VAA_01742 10b860a627b9ca08729adef462f52a62 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01742 10b860a627b9ca08729adef462f52a62 941 Gene3D G3DSA:1.20.1580.10 91 492 4.0E-247 T 13-10-2018 VAA_01742 10b860a627b9ca08729adef462f52a62 941 Gene3D G3DSA:1.20.1580.10 692 830 1.5E-139 T 13-10-2018 VAA_01742 10b860a627b9ca08729adef462f52a62 941 Pfam PF00005 ABC transporter 623 860 2.1E-8 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01742 10b860a627b9ca08729adef462f52a62 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.882 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VAA_01742 10b860a627b9ca08729adef462f52a62 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01742 10b860a627b9ca08729adef462f52a62 941 Gene3D G3DSA:1.10.8.280 287 403 4.0E-247 T 13-10-2018 VAA_01742 10b860a627b9ca08729adef462f52a62 941 SUPERFAMILY SSF52540 5 569 2.21E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01742 10b860a627b9ca08729adef462f52a62 941 Gene3D G3DSA:3.40.50.300 7 594 4.0E-247 T 13-10-2018 VAA_01742 10b860a627b9ca08729adef462f52a62 941 Gene3D G3DSA:3.30.190.20 131 240 4.0E-247 T 13-10-2018 VAA_01742 10b860a627b9ca08729adef462f52a62 941 SUPERFAMILY SSF52540 621 913 2.04E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01742 10b860a627b9ca08729adef462f52a62 941 Gene3D G3DSA:3.40.50.300 617 936 1.5E-139 T 13-10-2018 VAA_01742 10b860a627b9ca08729adef462f52a62 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Gene3D G3DSA:1.10.486.10 587 735 3.6E-157 T 13-10-2018 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 438 8.1E-59 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Gene3D G3DSA:3.40.50.300 446 852 3.6E-157 T 13-10-2018 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 10 1187 22.873 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 SUPERFAMILY SSF52540 18 831 9.64E-109 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Gene3D G3DSA:1.10.3170.10 160 350 4.5E-149 T 13-10-2018 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Pfam PF13361 UvrD-like helicase C-terminal domain 442 816 1.4E-17 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 SUPERFAMILY SSF52980 907 1188 2.52E-85 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Pfam PF12705 PD-(D/E)XK nuclease superfamily 962 1160 3.4E-7 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Gene3D G3DSA:3.40.50.300 12 437 4.5E-149 T 13-10-2018 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 12 1186 0.0 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VAA_03636 64264525a1f4f19fdb0fb52246eb64bd 1205 Gene3D G3DSA:3.90.320.10 895 1194 5.1E-102 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VAA_01312 5e5a6679288e37f518df275c513bd96f 462 PIRSF PIRSF002808 9 457 3.0E-169 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAA_01312 5e5a6679288e37f518df275c513bd96f 462 Gene3D G3DSA:1.20.1250.20 245 455 1.1E-61 T 13-10-2018 VAA_01312 5e5a6679288e37f518df275c513bd96f 462 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 5 443 2.4E-232 T 13-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VAA_01312 5e5a6679288e37f518df275c513bd96f 462 Gene3D G3DSA:1.20.1250.20 22 231 2.3E-58 T 13-10-2018 VAA_01312 5e5a6679288e37f518df275c513bd96f 462 Pfam PF07690 Major Facilitator Superfamily 38 405 9.4E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01312 5e5a6679288e37f518df275c513bd96f 462 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 39 422 5.9E-150 T 13-10-2018 VAA_01312 5e5a6679288e37f518df275c513bd96f 462 SUPERFAMILY SSF103473 22 449 1.16E-86 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01312 5e5a6679288e37f518df275c513bd96f 462 ProSitePatterns PS00942 glpT family of transporters signature. 157 173 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.0E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.0E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.0E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 2.0E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 SUPERFAMILY SSF46785 10 134 3.97E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00810 d66671a1b4b357e35306e326d94fe207 136 Pfam PF12802 MarR family 29 88 7.9E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 SMART SM00347 23 124 6.0E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_00810 d66671a1b4b357e35306e326d94fe207 136 Gene3D G3DSA:1.10.10.10 2 136 2.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 3.9E-20 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 SUPERFAMILY SSF56349 110 300 3.83E-56 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 Gene3D G3DSA:1.10.150.130 8 102 8.1E-23 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 SUPERFAMILY SSF47823 8 104 4.32E-36 T 13-10-2018 VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 56.052 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.831 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 Gene3D G3DSA:1.10.443.10 114 296 8.6E-74 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 7.5E-117 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VAA_00736 f236a4cb19182c2df69625e8cb5e0294 302 Pfam PF00589 Phage integrase family 117 288 4.3E-54 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_03622 31e3991708ccc8aaef21edf77cdc74a0 227 Pfam PF12973 ChrR Cupin-like domain 136 201 2.5E-13 T 13-10-2018 IPR025979 ChrR-like cupin domain VAA_03622 31e3991708ccc8aaef21edf77cdc74a0 227 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 224 1.9E-74 T 13-10-2018 IPR012807 Anti-sigma factor ChrR, putative VAA_03622 31e3991708ccc8aaef21edf77cdc74a0 227 Gene3D G3DSA:2.60.120.10 115 205 6.2E-24 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_03622 31e3991708ccc8aaef21edf77cdc74a0 227 Gene3D G3DSA:1.10.10.1320 1 113 3.4E-16 T 13-10-2018 VAA_03622 31e3991708ccc8aaef21edf77cdc74a0 227 SUPERFAMILY SSF51182 117 210 4.69E-13 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.7E-125 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 109 123 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 479 495 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 560 576 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 31 46 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 497 514 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 517 529 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 266 279 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 414 428 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 PRINTS PR00418 DNA topoisomerase II family signature 66 79 6.5E-57 T 13-10-2018 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 SUPERFAMILY SSF56719 388 620 8.11E-79 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 SMART SM00433 34 622 4.2E-215 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Gene3D G3DSA:3.40.50.670 390 621 1.5E-92 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 8.1E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Pfam PF00204 DNA gyrase B 218 384 2.5E-41 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 SMART SM00387 27 173 4.7E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Pfam PF01751 Toprim domain 413 512 1.6E-11 T 13-10-2018 IPR006171 TOPRIM domain VAA_03744 be5b045c8b54706625c69c8311079ac7 627 SUPERFAMILY SSF55874 5 215 5.16E-67 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 8.8E-28 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Gene3D G3DSA:3.30.230.10 216 389 3.1E-56 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.762 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 Gene3D G3DSA:3.30.565.10 2 215 1.7E-75 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03744 be5b045c8b54706625c69c8311079ac7 627 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_03744 be5b045c8b54706625c69c8311079ac7 627 SUPERFAMILY SSF54211 217 382 1.74E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_03779 f6f3ce6b283a5bf73f7efe8a4cdcec12 326 Pfam PF03888 MucB/RseB N-terminal domain 26 196 9.7E-59 T 13-10-2018 IPR033434 MucB/RseB, N-terminal VAA_03779 f6f3ce6b283a5bf73f7efe8a4cdcec12 326 PIRSF PIRSF005427 1 318 3.9E-81 T 13-10-2018 IPR005588 MucB/RseB VAA_03779 f6f3ce6b283a5bf73f7efe8a4cdcec12 326 Gene3D G3DSA:2.50.20.10 24 208 1.1E-50 T 13-10-2018 VAA_03779 f6f3ce6b283a5bf73f7efe8a4cdcec12 326 Gene3D G3DSA:3.30.200.100 217 315 2.6E-27 T 13-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VAA_03779 f6f3ce6b283a5bf73f7efe8a4cdcec12 326 Pfam PF17188 MucB/RseB C-terminal domain 218 311 2.5E-27 T 13-10-2018 IPR033436 MucB/RseB, C-terminal VAA_02198 c270a140bd095f8615792d8202ed6787 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.7E-119 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VAA_02198 c270a140bd095f8615792d8202ed6787 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.417 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VAA_02198 c270a140bd095f8615792d8202ed6787 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VAA_02198 c270a140bd095f8615792d8202ed6787 346 SUPERFAMILY SSF53383 14 344 8.94E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02198 c270a140bd095f8615792d8202ed6787 346 Gene3D G3DSA:3.40.640.10 49 253 8.7E-122 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02198 c270a140bd095f8615792d8202ed6787 346 Gene3D G3DSA:3.90.1150.10 4 336 8.7E-122 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02198 c270a140bd095f8615792d8202ed6787 346 Pfam PF00155 Aminotransferase class I and II 42 338 3.2E-54 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_02927 da9d5f4bb0356acad6ff1b521ee28abc 381 Pfam PF01676 Metalloenzyme superfamily 32 360 1.5E-29 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VAA_02927 da9d5f4bb0356acad6ff1b521ee28abc 381 Gene3D G3DSA:3.40.720.10 37 367 4.8E-58 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_02927 da9d5f4bb0356acad6ff1b521ee28abc 381 SUPERFAMILY SSF53649 6 373 6.15E-42 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_02927 da9d5f4bb0356acad6ff1b521ee28abc 381 Gene3D G3DSA:3.30.70.1250 62 195 4.8E-58 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_02927 da9d5f4bb0356acad6ff1b521ee28abc 381 PIRSF PIRSF001491 4 39 2.1E-5 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_02927 da9d5f4bb0356acad6ff1b521ee28abc 381 PIRSF PIRSF001491 34 374 4.8E-78 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VAA_02691 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02691 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02691 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02691 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02691 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02691 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 13-10-2018 VAA_02903 1ce8dcf934d8520b31058cf85dc2ef75 417 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 14 416 23.821 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VAA_02903 1ce8dcf934d8520b31058cf85dc2ef75 417 Pfam PF03616 Sodium/glutamate symporter 15 385 1.8E-152 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VAA_02903 1ce8dcf934d8520b31058cf85dc2ef75 417 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 20 416 9.2E-134 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VAA_00772 95fa4a59d12636d61a23cd604b530358 803 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 298 729 8.8E-210 T 13-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VAA_00772 95fa4a59d12636d61a23cd604b530358 803 SUPERFAMILY SSF48208 276 802 1.87E-111 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAA_00772 95fa4a59d12636d61a23cd604b530358 803 SMART SM01068 3 65 2.6E-19 T 13-10-2018 IPR009342 Putative carbohydrate binding domain VAA_00772 95fa4a59d12636d61a23cd604b530358 803 Gene3D G3DSA:2.60.420.10 724 803 8.7E-31 T 13-10-2018 VAA_00772 95fa4a59d12636d61a23cd604b530358 803 SUPERFAMILY SSF74650 3 271 1.35E-81 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAA_00772 95fa4a59d12636d61a23cd604b530358 803 Gene3D G3DSA:1.50.10.10 313 723 1.8E-135 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VAA_00772 95fa4a59d12636d61a23cd604b530358 803 Pfam PF06165 Glycosyltransferase family 36 23 269 3.9E-83 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 VAA_00772 95fa4a59d12636d61a23cd604b530358 803 Gene3D G3DSA:2.70.98.40 3 304 1.5E-114 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 PIRSF PIRSF036431 1 595 3.6E-186 T 13-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 SUPERFAMILY SSF47384 368 439 2.35E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 SUPERFAMILY SSF103190 48 187 5.1E-30 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Gene3D G3DSA:3.30.450.20 57 173 6.9E-40 T 13-10-2018 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Pfam PF02743 Cache domain 39 214 3.1E-15 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Gene3D G3DSA:3.30.565.10 441 593 5.0E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 SUPERFAMILY SSF55874 442 592 4.06E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 SMART SM00387 484 592 2.5E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 SMART SM00388 373 441 9.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Gene3D G3DSA:3.30.450.20 27 56 4.5E-8 T 13-10-2018 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Gene3D G3DSA:3.30.450.20 174 284 9.9E-34 T 13-10-2018 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 3.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Gene3D G3DSA:1.10.287.130 349 436 7.4E-21 T 13-10-2018 VAA_02300 5050ffdd3b3a24ffac733cfdb2f426f8 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 589 4.4E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 Gene3D G3DSA:3.40.50.180 150 346 7.4E-67 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 Pfam PF01339 CheB methylesterase 162 340 2.6E-53 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 Pfam PF00072 Response regulator receiver domain 6 110 5.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 SMART SM00448 4 120 8.0E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 346 37.045 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 Gene3D G3DSA:3.40.50.2300 1 133 2.8E-32 T 13-10-2018 VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 PIRSF PIRSF000876 1 347 3.2E-125 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 SUPERFAMILY SSF52172 1 109 1.02E-28 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01908 2d775caf0a833498cbe9807cd58fc5f8 347 SUPERFAMILY SSF52738 158 344 2.48E-62 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 324 469 5.1E-9 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Gene3D G3DSA:1.20.140.10 324 469 4.3E-88 T 13-10-2018 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Pfam PF09317 Domain of unknown function (DUF1974) 478 762 7.8E-113 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Gene3D G3DSA:1.10.540.10 86 199 4.3E-88 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 SUPERFAMILY SSF56645 84 319 6.94E-44 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 89 196 2.7E-13 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Gene3D G3DSA:2.40.110.10 200 323 4.3E-88 T 13-10-2018 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 201 300 3.8E-9 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VAA_03137 91dfc46fca113d43d96c7f793fa6a2dd 783 SUPERFAMILY SSF47203 324 476 7.09E-21 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VAA_00965 f676f96c82e3b73b8b3763d713d75c4d 181 SUPERFAMILY SSF52980 2 177 7.51E-66 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_00965 f676f96c82e3b73b8b3763d713d75c4d 181 PIRSF PIRSF011484 1 179 8.0E-68 T 13-10-2018 IPR009822 YaeQ VAA_00965 f676f96c82e3b73b8b3763d713d75c4d 181 Gene3D G3DSA:3.10.640.10 1 177 1.6E-68 T 13-10-2018 IPR038590 YaeQ superfamily VAA_00965 f676f96c82e3b73b8b3763d713d75c4d 181 Pfam PF07152 YaeQ protein 1 171 7.4E-70 T 13-10-2018 IPR009822 YaeQ VAA_00965 f676f96c82e3b73b8b3763d713d75c4d 181 SMART SM01322 1 174 1.2E-101 T 13-10-2018 IPR009822 YaeQ VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 Gene3D G3DSA:2.40.50.100 239 359 1.9E-12 T 13-10-2018 VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 SUPERFAMILY SSF50331 237 359 1.43E-14 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 Gene3D G3DSA:3.40.50.300 1 238 4.2E-77 T 13-10-2018 VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 Gene3D G3DSA:2.40.50.140 283 346 1.9E-12 T 13-10-2018 VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 SUPERFAMILY SSF52540 4 242 3.29E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 SMART SM00382 28 210 4.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01338 59c8aebd69961b206eb066ff6a4a5d4c 364 Pfam PF00005 ABC transporter 21 161 3.4E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03466 fa217f3380f5acfa3b9db2db3c55841a 142 Pfam PF03646 FlaG protein 39 140 3.4E-25 T 13-10-2018 IPR005186 FlaG protein VAA_03466 fa217f3380f5acfa3b9db2db3c55841a 142 Gene3D G3DSA:3.30.160.170 21 139 4.9E-14 T 13-10-2018 IPR035924 FlaG-like superfamily VAA_03466 fa217f3380f5acfa3b9db2db3c55841a 142 SUPERFAMILY SSF160214 49 139 3.14E-22 T 13-10-2018 IPR035924 FlaG-like superfamily VAA_01549 9a31af4ddf830044be71995ca12cc09d 170 SUPERFAMILY SSF141371 1 65 2.0E-15 T 13-10-2018 VAA_01549 9a31af4ddf830044be71995ca12cc09d 170 Gene3D G3DSA:2.40.10.220 60 166 1.4E-9 T 13-10-2018 VAA_01549 9a31af4ddf830044be71995ca12cc09d 170 Pfam PF07238 PilZ domain 64 154 8.2E-15 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VAA_01549 9a31af4ddf830044be71995ca12cc09d 170 SUPERFAMILY SSF141371 66 168 4.71E-20 T 13-10-2018 VAA_01727 24e5784461d0d5153f60f982eb756edf 191 Gene3D G3DSA:3.30.700.10 8 110 1.8E-10 T 13-10-2018 VAA_01727 24e5784461d0d5153f60f982eb756edf 191 SUPERFAMILY SSF54523 8 107 6.2E-13 T 13-10-2018 VAA_01727 24e5784461d0d5153f60f982eb756edf 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01727 24e5784461d0d5153f60f982eb756edf 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.2E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01727 24e5784461d0d5153f60f982eb756edf 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 5.4E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_03131 a699d4035ac0ace9f94843ab0e74e744 236 SUPERFAMILY SSF103039 17 180 5.89E-25 T 13-10-2018 IPR028976 CheC-like superfamily VAA_03131 a699d4035ac0ace9f94843ab0e74e744 236 Gene3D G3DSA:3.40.1550.10 15 180 3.2E-20 T 13-10-2018 IPR028976 CheC-like superfamily VAA_03131 a699d4035ac0ace9f94843ab0e74e744 236 Pfam PF11813 Protein of unknown function (DUF3334) 10 236 3.0E-116 T 13-10-2018 IPR024513 Protein of unknown function DUF3334 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 Gene3D G3DSA:3.40.190.10 92 277 3.0E-34 T 13-10-2018 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 Pfam PF03466 LysR substrate binding domain 90 285 8.6E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 SUPERFAMILY SSF53850 87 287 7.24E-37 T 13-10-2018 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 SUPERFAMILY SSF46785 3 111 7.67E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 Gene3D G3DSA:3.40.190.10 165 268 3.0E-34 T 13-10-2018 VAA_01641 384496f93e049dd66bf6da1cd7f36bc3 301 Gene3D G3DSA:1.10.10.10 3 88 2.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01322 c4cc54df9e44415a13788038a3f87914 394 SUPERFAMILY SSF51395 23 389 6.72E-98 T 13-10-2018 VAA_01322 c4cc54df9e44415a13788038a3f87914 394 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 17 394 72.115 T 13-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 VAA_01322 c4cc54df9e44415a13788038a3f87914 394 Pfam PF01070 FMN-dependent dehydrogenase 29 392 3.6E-126 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VAA_01322 c4cc54df9e44415a13788038a3f87914 394 Gene3D G3DSA:3.20.20.70 17 393 7.2E-126 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01322 c4cc54df9e44415a13788038a3f87914 394 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 289 295 - T 13-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VAA_01322 c4cc54df9e44415a13788038a3f87914 394 PIRSF PIRSF000138 5 394 3.2E-121 T 13-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SUPERFAMILY SSF54106 411 454 7.59E-10 T 13-10-2018 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SMART SM00646 231 390 1.7E-65 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 171 390 5.4E-47 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Gene3D G3DSA:3.40.630.40 160 400 1.9E-67 T 13-10-2018 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SMART SM00257 475 518 9.0E-12 T 13-10-2018 IPR018392 LysM domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SMART SM00257 528 571 2.6E-13 T 13-10-2018 IPR018392 LysM domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SMART SM00257 411 454 3.8E-14 T 13-10-2018 IPR018392 LysM domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Pfam PF11741 AMIN domain 35 137 2.9E-19 T 13-10-2018 IPR021731 AMIN domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Gene3D G3DSA:2.60.40.3500 23 139 1.3E-26 T 13-10-2018 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Gene3D G3DSA:3.10.350.10 403 461 7.0E-14 T 13-10-2018 IPR036779 LysM domain superfamily VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Gene3D G3DSA:3.10.350.10 525 573 2.0E-13 T 13-10-2018 IPR036779 LysM domain superfamily VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Gene3D G3DSA:3.10.350.10 464 524 4.1E-15 T 13-10-2018 IPR036779 LysM domain superfamily VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SUPERFAMILY SSF53187 169 393 6.59E-51 T 13-10-2018 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SUPERFAMILY SSF54106 474 518 1.06E-9 T 13-10-2018 VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Pfam PF01476 LysM domain 529 571 5.5E-12 T 13-10-2018 IPR018392 LysM domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Pfam PF01476 LysM domain 412 454 3.3E-11 T 13-10-2018 IPR018392 LysM domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 Pfam PF01476 LysM domain 476 518 5.3E-11 T 13-10-2018 IPR018392 LysM domain VAA_00115 ea6f1d8bac8ebacf0f20eb44ef337018 573 SUPERFAMILY SSF54106 528 571 1.44E-9 T 13-10-2018 VAA_02079 c0a09828621eb91d9d602750a30a5dbd 693 Gene3D G3DSA:2.40.170.20 66 693 1.9E-98 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAA_02079 c0a09828621eb91d9d602750a30a5dbd 693 Pfam PF00593 TonB dependent receptor 263 690 3.1E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAA_02079 c0a09828621eb91d9d602750a30a5dbd 693 SUPERFAMILY SSF56935 49 693 1.03E-96 T 13-10-2018 VAA_02079 c0a09828621eb91d9d602750a30a5dbd 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 176 8.0E-8 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VAA_02079 c0a09828621eb91d9d602750a30a5dbd 693 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 59 - T 13-10-2018 IPR010916 TonB box, conserved site VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 35 700 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 SUPERFAMILY SSF46600 656 703 4.05E-10 T 13-10-2018 IPR036876 UVR domain superfamily VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Gene3D G3DSA:3.40.50.300 297 446 6.4E-51 T 13-10-2018 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Gene3D G3DSA:3.40.50.300 447 628 3.5E-50 T 13-10-2018 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Gene3D G3DSA:3.40.50.300 27 265 3.1E-73 T 13-10-2018 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 SUPERFAMILY SSF52540 68 606 2.04E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Pfam PF12344 Ultra-violet resistance protein B 584 625 2.5E-20 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Pfam PF04851 Type III restriction enzyme, res subunit 47 169 8.3E-9 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Pfam PF00271 Helicase conserved C-terminal domain 473 576 6.7E-18 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Gene3D G3DSA:4.10.860.10 662 707 8.5E-19 T 13-10-2018 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 SUPERFAMILY SSF52540 34 447 1.71E-138 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 SMART SM00490 492 578 2.6E-20 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Pfam PF02151 UvrB/uvrC motif 667 702 8.3E-8 T 13-10-2018 IPR001943 UVR domain GO:0005515 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 Hamap MF_00204 UvrABC system protein B [uvrB]. 34 702 42.968 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VAA_02386 4e8130a4c9ddeba8aa2d698b252ced38 707 SMART SM00487 40 457 3.0E-27 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01109 43821aaa28be524f2cbafa4a59b77483 464 Gene3D G3DSA:3.40.50.720 141 261 7.4E-16 T 13-10-2018 VAA_01109 43821aaa28be524f2cbafa4a59b77483 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 464 2.7E-172 T 13-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VAA_01109 43821aaa28be524f2cbafa4a59b77483 464 Pfam PF02397 Bacterial sugar transferase 274 456 4.4E-65 T 13-10-2018 IPR003362 Bacterial sugar transferase VAA_01109 43821aaa28be524f2cbafa4a59b77483 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 464 2.6E-151 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VAA_01109 43821aaa28be524f2cbafa4a59b77483 464 Pfam PF13727 CoA-binding domain 62 238 3.9E-44 T 13-10-2018 VAA_01109 43821aaa28be524f2cbafa4a59b77483 464 SUPERFAMILY SSF51735 142 269 8.27E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 685 1.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 1.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 666 1.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 1.9E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 529 4.4E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SMART SM00387 577 688 7.4E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Gene3D G3DSA:3.40.50.2300 722 870 1.8E-40 T 13-10-2018 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SUPERFAMILY SSF158472 382 432 2.35E-11 T 13-10-2018 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Gene3D G3DSA:3.30.450.20 876 973 9.8E-9 T 13-10-2018 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SMART SM00304 381 434 8.0E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Pfam PF00072 Response regulator receiver domain 729 839 2.4E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SUPERFAMILY SSF55874 520 688 1.02E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Gene3D G3DSA:1.10.8.500 380 430 4.9E-18 T 13-10-2018 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SMART SM00448 726 839 1.7E-42 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SMART SM00388 463 531 2.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SUPERFAMILY SSF47384 449 531 5.3E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Gene3D G3DSA:3.30.565.10 530 691 4.1E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Gene3D G3DSA:3.30.450.20 265 362 1.8E-7 T 13-10-2018 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SUPERFAMILY SSF52172 720 856 7.12E-40 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Gene3D G3DSA:1.10.287.130 431 529 3.0E-21 T 13-10-2018 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SMART SM00091 877 942 9.2E-5 T 13-10-2018 IPR000014 PAS domain VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 687 1.9E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Pfam PF00672 HAMP domain 383 431 8.3E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 SUPERFAMILY SSF55785 865 937 3.14E-8 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00782 4bf10ff5c48e9a63889123d2ead1866a 1134 Pfam PF00989 PAS fold 880 930 4.9E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 161 1.1E-30 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 SMART SM00475 6 257 4.2E-64 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 Gene3D G3DSA:3.40.50.1010 4 169 7.8E-52 T 13-10-2018 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 SUPERFAMILY SSF47807 167 256 2.09E-19 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 Gene3D G3DSA:1.10.150.20 170 258 8.7E-21 T 13-10-2018 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 257 8.5E-23 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 Hamap MF_01192 Flap endonuclease Xni [xni]. 5 258 45.942 T 13-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 SUPERFAMILY SSF88723 7 167 2.16E-39 T 13-10-2018 IPR029060 PIN-like domain superfamily VAA_01156 81b4cadf4f9665ed1ffe0e88328fbb7b 264 SMART SM00279 170 205 1.3E-7 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 Gene3D G3DSA:3.40.50.2300 2 121 1.2E-32 T 13-10-2018 VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.9E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 SUPERFAMILY SSF46894 137 233 3.97E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 SMART SM00862 156 232 2.4E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 Gene3D G3DSA:1.10.10.10 122 236 2.8E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 Pfam PF00072 Response regulator receiver domain 6 113 5.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 SUPERFAMILY SSF52172 2 130 4.27E-36 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03687 ac0659efda5fc1ed9b41912796eeb500 238 SMART SM00448 4 114 1.7E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00953 7a4dfa60adc0589f107842b10731b987 81 SUPERFAMILY SSF46785 1 55 6.98E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00953 7a4dfa60adc0589f107842b10731b987 81 SMART SM00418 1 56 2.2E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00953 7a4dfa60adc0589f107842b10731b987 81 Gene3D G3DSA:1.10.10.10 1 74 1.8E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00953 7a4dfa60adc0589f107842b10731b987 81 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 1.8E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00953 7a4dfa60adc0589f107842b10731b987 81 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.8E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00953 7a4dfa60adc0589f107842b10731b987 81 Pfam PF01022 Bacterial regulatory protein, arsR family 2 31 4.0E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00953 7a4dfa60adc0589f107842b10731b987 81 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 2 20 - T 13-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 Pfam PF00691 OmpA family 78 173 7.1E-22 T 13-10-2018 IPR006665 OmpA-like domain VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 179 2.2E-44 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 179 30.776 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 PRINTS PR01021 OMPA domain signature 109 124 8.4E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 PRINTS PR01021 OMPA domain signature 79 101 8.4E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 PRINTS PR01021 OMPA domain signature 124 140 8.4E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 SUPERFAMILY SSF103088 70 179 2.22E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_03152 6015c746ac467efbc3cf7585302bc03f 179 Gene3D G3DSA:3.30.1330.60 54 179 2.3E-40 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 SUPERFAMILY SSF53738 250 379 4.32E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 SUPERFAMILY SSF55957 374 466 3.14E-18 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 SUPERFAMILY SSF53738 2 187 3.92E-41 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 416 466 9.1E-10 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.0E-24 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Gene3D G3DSA:3.40.120.10 1 170 3.3E-46 T 13-10-2018 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 1.0E-38 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Gene3D G3DSA:3.40.120.10 263 370 3.8E-58 T 13-10-2018 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Gene3D G3DSA:3.40.120.10 171 365 3.8E-58 T 13-10-2018 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Gene3D G3DSA:3.30.310.50 381 469 1.6E-16 T 13-10-2018 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00771 a3d78e35c427c1aa82898577153ceb89 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 2.5E-24 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_00011 125170bc8b36db5b3be1deacf13ee52f 83 SUPERFAMILY SSF143120 11 67 4.19E-10 T 13-10-2018 IPR036165 YefM-like superfamily VAA_00011 125170bc8b36db5b3be1deacf13ee52f 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 59 4.7E-7 T 13-10-2018 VAA_00011 125170bc8b36db5b3be1deacf13ee52f 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 71 1.4E-12 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 Gene3D G3DSA:3.40.50.300 9 173 8.6E-45 T 13-10-2018 VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 SUPERFAMILY SSF48019 214 326 1.0E-18 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 SUPERFAMILY SSF52540 11 207 3.4E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 Gene3D G3DSA:1.20.272.10 216 326 3.2E-9 T 13-10-2018 VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 20 203 6.0E-57 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 Pfam PF13177 DNA polymerase III, delta subunit 20 172 3.1E-40 T 13-10-2018 VAA_03337 58e129cdd4b4cd45ac30e693d34754ed 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 213 322 2.5E-24 T 13-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_01604 3ef47162f7e6c127acfe2bda216329ec 361 Gene3D G3DSA:1.10.3720.10 119 348 5.2E-20 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01604 3ef47162f7e6c127acfe2bda216329ec 361 SUPERFAMILY SSF161098 125 342 8.11E-15 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01604 3ef47162f7e6c127acfe2bda216329ec 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 148 355 5.3E-34 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01601 bc76134105375617417acf624afa4af0 206 Pfam PF05618 Putative ATP-dependant zinc protease 71 204 2.0E-45 T 13-10-2018 VAA_01601 bc76134105375617417acf624afa4af0 206 Gene3D G3DSA:2.40.70.10 68 195 1.8E-39 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VAA_01601 bc76134105375617417acf624afa4af0 206 SUPERFAMILY SSF50630 71 202 3.17E-40 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VAA_02580 207955f4db5eb2500fdd97caead3a5a2 309 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 38 303 7.5E-102 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VAA_02580 207955f4db5eb2500fdd97caead3a5a2 309 Pfam PF02219 Methylenetetrahydrofolate reductase 31 304 1.4E-100 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAA_02580 207955f4db5eb2500fdd97caead3a5a2 309 SUPERFAMILY SSF51730 35 307 6.47E-94 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like VAA_02580 207955f4db5eb2500fdd97caead3a5a2 309 Gene3D G3DSA:3.20.20.220 14 309 1.4E-109 T 13-10-2018 VAA_03342 c6dce9367c7e798a06701fff3b489aea 104 Pfam PF00550 Phosphopantetheine attachment site 33 100 6.0E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAA_03342 c6dce9367c7e798a06701fff3b489aea 104 Hamap MF_01217 Acyl carrier protein [acpP]. 30 104 22.891 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VAA_03342 c6dce9367c7e798a06701fff3b489aea 104 Gene3D G3DSA:1.10.1200.10 26 103 5.1E-30 T 13-10-2018 IPR036736 ACP-like superfamily VAA_03342 c6dce9367c7e798a06701fff3b489aea 104 SUPERFAMILY SSF47336 26 103 3.14E-24 T 13-10-2018 IPR036736 ACP-like superfamily VAA_03342 c6dce9367c7e798a06701fff3b489aea 104 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 28 103 5.9E-37 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VAA_03342 c6dce9367c7e798a06701fff3b489aea 104 ProSitePatterns PS00012 Phosphopantetheine attachment site. 59 74 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site VAA_00302 d2d9724b1d2f7f77f6ef157b4871bc7e 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 1.1E-27 T 13-10-2018 IPR013097 Stress responsive alpha-beta barrel VAA_00302 d2d9724b1d2f7f77f6ef157b4871bc7e 98 SMART SM00886 2 98 3.6E-33 T 13-10-2018 IPR013097 Stress responsive alpha-beta barrel VAA_00302 d2d9724b1d2f7f77f6ef157b4871bc7e 98 SUPERFAMILY SSF54909 1 97 1.13E-27 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_00302 d2d9724b1d2f7f77f6ef157b4871bc7e 98 Gene3D G3DSA:3.30.70.100 1 98 1.5E-34 T 13-10-2018 VAA_03345 c2067d8d869cad2a64c8b4ce49b0f8fd 316 SUPERFAMILY SSF53901 3 315 2.2E-70 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03345 c2067d8d869cad2a64c8b4ce49b0f8fd 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 2.2E-34 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_03345 c2067d8d869cad2a64c8b4ce49b0f8fd 316 Gene3D G3DSA:3.40.47.10 1 316 3.1E-126 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03345 c2067d8d869cad2a64c8b4ce49b0f8fd 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.0E-31 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_03345 c2067d8d869cad2a64c8b4ce49b0f8fd 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 5.7E-143 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_03345 c2067d8d869cad2a64c8b4ce49b0f8fd 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.068 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VAA_00597 db16752ed7a9f667959a882b25bd0429 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 4.8E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00597 db16752ed7a9f667959a882b25bd0429 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 1.5E-8 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAA_00597 db16752ed7a9f667959a882b25bd0429 312 Gene3D G3DSA:1.10.3720.10 86 306 1.3E-24 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00597 db16752ed7a9f667959a882b25bd0429 312 SUPERFAMILY SSF161098 93 294 3.66E-25 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00686 9d97b81bdbb1cb0ec7d8105f5d71cb54 117 SUPERFAMILY SSF55620 1 114 2.28E-37 T 13-10-2018 VAA_00686 9d97b81bdbb1cb0ec7d8105f5d71cb54 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.9E-32 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAA_00686 9d97b81bdbb1cb0ec7d8105f5d71cb54 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 8.3E-30 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAA_00686 9d97b81bdbb1cb0ec7d8105f5d71cb54 117 SMART SM00905 4 114 4.7E-49 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAA_00686 9d97b81bdbb1cb0ec7d8105f5d71cb54 117 Gene3D G3DSA:3.30.1130.10 1 116 2.5E-45 T 13-10-2018 VAA_00686 9d97b81bdbb1cb0ec7d8105f5d71cb54 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 3.8E-38 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VAA_03564 0bc0db4576e43c4ec90d5fd34ff289fa 382 Pfam PF02684 Lipid-A-disaccharide synthetase 10 375 5.4E-128 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VAA_03564 0bc0db4576e43c4ec90d5fd34ff289fa 382 SUPERFAMILY SSF53756 9 380 9.42E-30 T 13-10-2018 VAA_03564 0bc0db4576e43c4ec90d5fd34ff289fa 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 381 41.373 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VAA_03564 0bc0db4576e43c4ec90d5fd34ff289fa 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 379 1.7E-135 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VAA_00100 e7ebb2a0ecdcfa0f72b506949cd72068 171 SUPERFAMILY SSF55729 35 151 1.43E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00100 e7ebb2a0ecdcfa0f72b506949cd72068 171 Pfam PF13302 Acetyltransferase (GNAT) domain 59 149 4.8E-15 T 13-10-2018 IPR000182 GNAT domain VAA_00100 e7ebb2a0ecdcfa0f72b506949cd72068 171 Gene3D G3DSA:3.40.630.30 2 156 1.4E-18 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Pfam PF13437 HlyD family secretion protein 316 418 4.8E-17 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Pfam PF13533 Biotin-lipoyl like 77 108 1.2E-5 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Gene3D G3DSA:1.10.287.470 105 125 5.5E-7 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 5.7E-135 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Gene3D G3DSA:1.20.1600.10 161 262 1.0E-5 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Gene3D G3DSA:2.40.30.170 326 446 2.2E-11 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Gene3D G3DSA:2.40.50.100 70 104 5.5E-7 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 1.1E-46 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 SUPERFAMILY SSF111369 63 124 4.58E-6 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 Gene3D G3DSA:2.40.30.170 59 69 5.5E-7 T 13-10-2018 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VAA_01917 2fe5fc0db360fad7e50c3694e4ca5d51 463 SUPERFAMILY SSF56954 139 270 1.15E-6 T 13-10-2018 VAA_00738 bf0b302ab233ded150bde0885870a144 579 Gene3D G3DSA:3.10.310.30 325 455 1.4E-30 T 13-10-2018 VAA_00738 bf0b302ab233ded150bde0885870a144 579 Pfam PF02272 DHHA1 domain 319 451 2.2E-27 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VAA_00738 bf0b302ab233ded150bde0885870a144 579 Gene3D G3DSA:3.90.1640.30 43 323 4.6E-89 T 13-10-2018 VAA_00738 bf0b302ab233ded150bde0885870a144 579 Pfam PF01368 DHH family 71 202 2.7E-8 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VAA_00738 bf0b302ab233ded150bde0885870a144 579 SUPERFAMILY SSF64182 45 463 3.01E-118 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VAA_00738 bf0b302ab233ded150bde0885870a144 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 575 2.5E-158 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VAA_00655 458cc4203f29065451a15d3681afc494 134 Gene3D G3DSA:3.10.290.10 7 113 8.5E-37 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_00655 458cc4203f29065451a15d3681afc494 134 PIRSF PIRSF016821 11 134 8.4E-41 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VAA_00655 458cc4203f29065451a15d3681afc494 134 SMART SM00363 14 78 2.1E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00655 458cc4203f29065451a15d3681afc494 134 Pfam PF01479 S4 domain 15 60 9.5E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00655 458cc4203f29065451a15d3681afc494 134 SUPERFAMILY SSF55174 13 111 9.52E-32 T 13-10-2018 VAA_02193 d9a209fe5b0fbd0e42ac408fabefeea8 257 Gene3D G3DSA:3.20.20.70 1 257 2.3E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02193 d9a209fe5b0fbd0e42ac408fabefeea8 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.6E-78 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VAA_02193 d9a209fe5b0fbd0e42ac408fabefeea8 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 2.7E-113 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VAA_02193 d9a209fe5b0fbd0e42ac408fabefeea8 257 SUPERFAMILY SSF51366 1 256 2.9E-73 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02193 d9a209fe5b0fbd0e42ac408fabefeea8 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.096 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 78 277 9.4E-24 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 Gene3D G3DSA:1.10.287.470 116 175 1.7E-49 T 13-10-2018 VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 SUPERFAMILY SSF111369 70 283 9.81E-31 T 13-10-2018 VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 357 2.6E-46 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 Gene3D G3DSA:2.40.420.20 290 357 1.7E-49 T 13-10-2018 VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 Gene3D G3DSA:2.40.30.170 70 289 1.7E-49 T 13-10-2018 VAA_00787 4ff18f0dd30c5077eb5cc9b8e4eaa7fd 368 Gene3D G3DSA:2.40.50.100 81 209 1.7E-49 T 13-10-2018 VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 Pfam PF13353 4Fe-4S single cluster domain 114 182 4.9E-7 T 13-10-2018 VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 6.8E-156 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 PIRSF PIRSF004911 3 340 6.0E-114 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 Pfam PF04055 Radical SAM superfamily 117 247 3.1E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 2.7E-126 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 Gene3D G3DSA:3.20.20.70 51 334 1.8E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02604 852d392c2627e5b92b7ecd73276c6825 340 SUPERFAMILY SSF102114 102 324 4.84E-26 T 13-10-2018 VAA_01805 2a8c0bfb440b730fa0f39283bbd883c3 287 Pfam PF01734 Patatin-like phospholipase 12 176 7.3E-13 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VAA_01805 2a8c0bfb440b730fa0f39283bbd883c3 287 Gene3D G3DSA:3.40.1090.10 95 201 1.8E-9 T 13-10-2018 VAA_01805 2a8c0bfb440b730fa0f39283bbd883c3 287 SUPERFAMILY SSF52151 10 240 8.63E-35 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAA_00209 c6c052407482f14d154abddc1849d95d 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 1.1E-169 T 13-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VAA_00209 c6c052407482f14d154abddc1849d95d 370 SMART SM00876 256 359 1.1E-32 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_00209 c6c052407482f14d154abddc1849d95d 370 Gene3D G3DSA:3.20.20.70 9 367 3.4E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00209 c6c052407482f14d154abddc1849d95d 370 SUPERFAMILY SSF102114 37 332 2.75E-51 T 13-10-2018 VAA_00209 c6c052407482f14d154abddc1849d95d 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 4.0E-24 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_00209 c6c052407482f14d154abddc1849d95d 370 Pfam PF04055 Radical SAM superfamily 81 219 4.0E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_01341 ea129be53c99b5763d037a8249f26759 415 SUPERFAMILY SSF53850 34 406 4.23E-58 T 13-10-2018 VAA_01341 ea129be53c99b5763d037a8249f26759 415 Gene3D G3DSA:3.40.190.10 137 399 1.0E-72 T 13-10-2018 VAA_01341 ea129be53c99b5763d037a8249f26759 415 Gene3D G3DSA:3.40.190.10 49 339 1.0E-72 T 13-10-2018 VAA_01341 ea129be53c99b5763d037a8249f26759 415 Pfam PF13416 Bacterial extracellular solute-binding protein 45 344 1.1E-35 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_00002 6ba737443175cdb93be21962519ce127 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 2.1E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 SUPERFAMILY SSF52172 2 157 2.63E-18 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00002 6ba737443175cdb93be21962519ce127 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 SMART SM00448 2 113 1.5E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00002 6ba737443175cdb93be21962519ce127 198 SUPERFAMILY SSF46894 137 197 2.04E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 Gene3D G3DSA:1.10.10.10 123 197 1.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00002 6ba737443175cdb93be21962519ce127 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 SMART SM00421 135 192 4.8E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00002 6ba737443175cdb93be21962519ce127 198 Gene3D G3DSA:3.40.50.2300 2 122 2.1E-19 T 13-10-2018 VAA_00002 6ba737443175cdb93be21962519ce127 198 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02064 e10be817745e42a3da55f4056d61e07d 474 SUPERFAMILY SSF48317 189 357 1.57E-9 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VAA_02064 e10be817745e42a3da55f4056d61e07d 474 SUPERFAMILY SSF55811 33 112 1.49E-17 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_02064 e10be817745e42a3da55f4056d61e07d 474 Pfam PF00293 NUDIX domain 36 102 6.7E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_02064 e10be817745e42a3da55f4056d61e07d 474 Pfam PF01569 PAP2 superfamily 246 358 8.3E-8 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAA_02064 e10be817745e42a3da55f4056d61e07d 474 Gene3D G3DSA:3.90.79.10 18 136 8.5E-15 T 13-10-2018 VAA_02064 e10be817745e42a3da55f4056d61e07d 474 PRINTS PR00502 NUDIX hydrolase family signature 57 71 6.5E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAA_02064 e10be817745e42a3da55f4056d61e07d 474 PRINTS PR00502 NUDIX hydrolase family signature 71 86 6.5E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VAA_02064 e10be817745e42a3da55f4056d61e07d 474 ProSitePatterns PS00893 Nudix box signature. 62 83 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 Gene3D G3DSA:3.40.50.1170 1 209 4.6E-92 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 SMART SM00870 5 324 2.2E-137 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 5.4E-16 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 5.4E-16 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 5.4E-16 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 Pfam PF00710 Asparaginase, N-terminal 5 192 2.2E-66 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 PIRSF PIRSF500176 2 333 8.4E-108 T 13-10-2018 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 PIRSF PIRSF001220 1 335 4.2E-93 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 Gene3D G3DSA:3.40.50.40 210 337 4.7E-45 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 SUPERFAMILY SSF53774 3 336 1.7E-112 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 3.6E-116 T 13-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VAA_02340 61ba47b9820a31c9152b92e9c4cf47e9 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VAA_01245 f31a487499129d42d3802035977577c1 240 SUPERFAMILY SSF75516 2 153 1.22E-35 T 13-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily VAA_01245 f31a487499129d42d3802035977577c1 240 Pfam PF03472 Autoinducer binding domain 17 148 2.6E-30 T 13-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain VAA_01245 f31a487499129d42d3802035977577c1 240 SUPERFAMILY SSF46894 169 237 3.74E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01245 f31a487499129d42d3802035977577c1 240 SMART SM00421 173 230 1.4E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01245 f31a487499129d42d3802035977577c1 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 230 5.1E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01245 f31a487499129d42d3802035977577c1 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 3.0E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01245 f31a487499129d42d3802035977577c1 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 3.0E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01245 f31a487499129d42d3802035977577c1 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 3.0E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01245 f31a487499129d42d3802035977577c1 240 Gene3D G3DSA:1.10.10.10 170 237 1.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01245 f31a487499129d42d3802035977577c1 240 Gene3D G3DSA:3.30.450.80 3 165 1.1E-37 T 13-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 337 491 1.3E-30 T 13-10-2018 VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 SMART SM00560 353 489 3.0E-9 T 13-10-2018 IPR006558 LamG-like jellyroll fold VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 Gene3D G3DSA:2.60.120.200 508 766 7.0E-10 T 13-10-2018 VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 Pfam PF04519 Polymer-forming cytoskeletal 119 191 2.0E-6 T 13-10-2018 IPR007607 Bactofilin A/B VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 Gene3D G3DSA:2.60.120.200 303 500 5.1E-33 T 13-10-2018 VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 SUPERFAMILY SSF49899 270 497 5.02E-33 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAA_01721 d69a70638d1e107cf607686e45ab3a7d 1473 SUPERFAMILY SSF49899 511 765 3.17E-21 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 382 9.1E-110 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 Pfam PF01494 FAD binding domain 150 332 4.9E-20 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 SUPERFAMILY SSF51905 3 375 6.19E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 Gene3D G3DSA:3.50.50.60 5 330 7.3E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 4.9E-18 T 13-10-2018 VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.9E-18 T 13-10-2018 VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.9E-18 T 13-10-2018 VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 4.9E-18 T 13-10-2018 VAA_01086 e50ff5fff981410f5cc7b1b7a335b112 383 Gene3D G3DSA:3.30.9.50 80 266 7.3E-95 T 13-10-2018 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 276 283 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 304 315 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 Gene3D G3DSA:3.40.605.10 41 494 1.3E-174 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 Pfam PF00171 Aldehyde dehydrogenase family 45 498 1.2E-163 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 Gene3D G3DSA:3.40.309.10 283 471 1.3E-174 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 SUPERFAMILY SSF53720 15 501 5.11E-164 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_03141 64bf8e738d9266026c7e6a46d8b231da 505 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 52 497 8.4E-205 T 13-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VAA_00581 26a354cdaec87ae87dd972f60874c609 212 Gene3D G3DSA:3.40.50.150 39 204 1.5E-13 T 13-10-2018 VAA_00581 26a354cdaec87ae87dd972f60874c609 212 SUPERFAMILY SSF53335 48 198 3.34E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00581 26a354cdaec87ae87dd972f60874c609 212 Pfam PF13489 Methyltransferase domain 62 194 2.3E-20 T 13-10-2018 VAA_01505 9173eaf77ed20b74bc4550bd6534f82e 493 SUPERFAMILY SSF51905 24 307 4.23E-17 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01505 9173eaf77ed20b74bc4550bd6534f82e 493 Gene3D G3DSA:3.30.9.10 126 326 1.7E-9 T 13-10-2018 VAA_01505 9173eaf77ed20b74bc4550bd6534f82e 493 Gene3D G3DSA:3.50.50.60 24 277 1.7E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01505 9173eaf77ed20b74bc4550bd6534f82e 493 Pfam PF01266 FAD dependent oxidoreductase 24 384 1.1E-11 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SUPERFAMILY SSF55073 279 433 1.49E-46 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Gene3D G3DSA:3.30.450.20 150 261 1.6E-7 T 13-10-2018 VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SUPERFAMILY SSF141868 448 695 8.37E-85 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Gene3D G3DSA:3.30.450.20 37 149 1.1E-12 T 13-10-2018 VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Gene3D G3DSA:3.30.70.270 276 442 2.1E-50 T 13-10-2018 VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 427 2.8E-42 T 13-10-2018 IPR000160 GGDEF domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 428 5.2E-37 T 13-10-2018 IPR000160 GGDEF domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SMART SM00267 263 431 3.8E-56 T 13-10-2018 IPR000160 GGDEF domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SMART SM00091 152 219 0.47 T 13-10-2018 IPR000014 PAS domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SMART SM00091 29 95 7.5E-4 T 13-10-2018 IPR000014 PAS domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SUPERFAMILY SSF55785 136 220 3.81E-7 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Pfam PF13188 PAS domain 153 200 5.3E-6 T 13-10-2018 IPR000014 PAS domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SUPERFAMILY SSF55785 27 136 1.45E-10 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 SMART SM00052 441 687 3.2E-106 T 13-10-2018 IPR001633 EAL domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Gene3D G3DSA:3.20.20.450 443 696 3.7E-94 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Pfam PF08448 PAS fold 36 140 1.4E-7 T 13-10-2018 IPR013656 PAS fold-4 VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 141 2.1E-9 T 13-10-2018 IPR000014 PAS domain VAA_00814 f8a01b6dad212758a4a96c82a0bc390f 703 Pfam PF00563 EAL domain 448 682 8.0E-72 T 13-10-2018 IPR001633 EAL domain VAA_00748 ccd7fcbfabc4fd2c4590fa55a9aadeb8 257 PIRSF PIRSF006648 7 254 1.3E-25 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_00748 ccd7fcbfabc4fd2c4590fa55a9aadeb8 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 103 128 3.4E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_00748 ccd7fcbfabc4fd2c4590fa55a9aadeb8 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 3.4E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_00748 ccd7fcbfabc4fd2c4590fa55a9aadeb8 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 3.4E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_00748 ccd7fcbfabc4fd2c4590fa55a9aadeb8 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 3.4E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_00748 ccd7fcbfabc4fd2c4590fa55a9aadeb8 257 Pfam PF01061 ABC-2 type transporter 9 219 5.6E-40 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VAA_03942 fcc6d18d5437bf7e569d94dfad9872a2 99 Pfam PF01527 Transposase 10 79 2.0E-5 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VAA_03942 fcc6d18d5437bf7e569d94dfad9872a2 99 SUPERFAMILY SSF46689 10 97 1.56E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00014 fcc6d18d5437bf7e569d94dfad9872a2 99 Pfam PF01527 Transposase 10 79 2.0E-5 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VAA_00014 fcc6d18d5437bf7e569d94dfad9872a2 99 SUPERFAMILY SSF46689 10 97 1.56E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_04317 1429b3378eb9ef8e4aceafcfcab93d4d 139 Gene3D G3DSA:3.40.1650.10 8 135 6.8E-37 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VAA_04317 1429b3378eb9ef8e4aceafcfcab93d4d 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.8E-48 T 13-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VAA_04317 1429b3378eb9ef8e4aceafcfcab93d4d 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.863 T 13-10-2018 IPR023064 D-ribose pyranase GO:0016872 VAA_04317 1429b3378eb9ef8e4aceafcfcab93d4d 139 SUPERFAMILY SSF102546 1 139 2.35E-44 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 1.1E-33 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 Gene3D G3DSA:1.10.10.60 188 293 9.7E-26 T 13-10-2018 VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 SUPERFAMILY SSF46689 245 292 1.88E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 SUPERFAMILY SSF46689 192 243 1.25E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 Pfam PF12833 Helix-turn-helix domain 215 291 1.6E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_01568 92f6330d0fb65f35b4f361a974cb2a6e 293 SMART SM00342 209 292 9.1E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 SUPERFAMILY SSF54768 8 75 6.91E-24 T 13-10-2018 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.429 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 7.3E-29 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 7.6E-68 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 Gene3D G3DSA:3.30.160.20 1 73 6.7E-33 T 13-10-2018 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.7E-29 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 Gene3D G3DSA:3.30.230.10 74 166 6.3E-35 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 SUPERFAMILY SSF54211 79 158 2.53E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02687 6241bb7b1b6fcd6e232ec9abfa8fbd5c 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 SUPERFAMILY SSF116878 131 464 9.55E-53 T 13-10-2018 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 SUPERFAMILY SSF52540 81 382 3.72E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 379 5.5E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Pfam PF01926 50S ribosome-binding GTPase 228 317 1.1E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 21 464 1.4E-101 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Gene3D G3DSA:3.40.50.300 227 392 1.6E-103 T 13-10-2018 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Pfam PF12631 MnmE helical domain 133 461 5.8E-62 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Pfam PF10396 GTP-binding protein TrmE N-terminus 16 130 1.1E-35 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Gene3D G3DSA:3.30.1360.120 7 131 1.1E-39 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Gene3D G3DSA:1.20.120.430 132 464 1.6E-103 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VAA_00838 d6d0f30b43c22d9c953c6dc0f0e8973a 464 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 15 464 32.925 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 Pfam PF11967 Recombination protein O N terminal 9 81 2.0E-23 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.686 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 Gene3D G3DSA:2.40.50.140 6 83 5.3E-33 T 13-10-2018 VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 Pfam PF02565 Recombination protein O C terminal 89 230 1.0E-23 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 SUPERFAMILY SSF57863 90 169 7.59E-12 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 Gene3D G3DSA:1.20.1440.120 84 242 3.8E-53 T 13-10-2018 VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 232 6.3E-40 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VAA_03773 24c1868e0bd5ccb2a55d7aa860be5063 246 SUPERFAMILY SSF50249 10 80 6.51E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 210 238 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 Gene3D G3DSA:2.160.10.10 151 281 5.7E-38 T 13-10-2018 VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 SUPERFAMILY SSF51161 15 268 1.94E-63 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 201 234 3.8E-9 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 Gene3D G3DSA:1.10.3130.10 9 150 2.3E-51 T 13-10-2018 VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 90 250 6.1E-74 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 Pfam PF06426 Serine acetyltransferase, N-terminal 17 120 2.8E-38 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 SMART SM00971 17 121 3.1E-61 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAA_02614 845aecac19f60a3c11d226b46d0dc1dc 281 PIRSF PIRSF000441 83 274 3.4E-56 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 42.115 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 Gene3D G3DSA:3.30.160.70 1 70 3.4E-15 T 13-10-2018 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 3.0E-38 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 SUPERFAMILY SSF46767 74 155 1.05E-33 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 9.4E-35 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 2 71 9.1E-5 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 SUPERFAMILY SSF53155 4 79 3.53E-20 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VAA_00253 023ed2ea03aae91e13137c377cad2120 163 Gene3D G3DSA:1.10.10.10 74 160 3.5E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02823 eca9edeceb70ffe5432107d90c437605 201 SUPERFAMILY SSF48498 83 195 2.19E-19 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_02823 eca9edeceb70ffe5432107d90c437605 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 7.3E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02823 eca9edeceb70ffe5432107d90c437605 201 Gene3D G3DSA:1.10.357.10 2 196 1.1E-59 T 13-10-2018 VAA_02823 eca9edeceb70ffe5432107d90c437605 201 SUPERFAMILY SSF46689 3 78 1.03E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02823 eca9edeceb70ffe5432107d90c437605 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.0E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02823 eca9edeceb70ffe5432107d90c437605 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.0E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02823 eca9edeceb70ffe5432107d90c437605 201 Pfam PF16925 Bacterial transcriptional repressor C-terminal 107 187 9.8E-8 T 13-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VAA_01480 3c96971e8d578aa75a3313ddf4aa84e9 297 Pfam PF01261 Xylose isomerase-like TIM barrel 33 244 3.3E-28 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VAA_01480 3c96971e8d578aa75a3313ddf4aa84e9 297 Gene3D G3DSA:3.20.20.150 1 290 4.4E-75 T 13-10-2018 VAA_01480 3c96971e8d578aa75a3313ddf4aa84e9 297 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 4 290 1.7E-129 T 13-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 VAA_01480 3c96971e8d578aa75a3313ddf4aa84e9 297 SUPERFAMILY SSF51658 6 289 1.66E-57 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 SUPERFAMILY SSF52518 9 185 4.02E-32 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Gene3D G3DSA:3.40.50.970 4 198 2.4E-58 T 13-10-2018 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Gene3D G3DSA:3.40.50.970 365 572 8.9E-48 T 13-10-2018 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 569 32.645 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 PIRSF PIRSF004983 3 572 2.9E-182 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Gene3D G3DSA:3.40.50.1220 218 345 4.0E-40 T 13-10-2018 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 190 404 1.0E-39 T 13-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 173 3.4E-30 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 SUPERFAMILY SSF52518 398 556 1.38E-24 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 445 5.1E-136 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 550 1.2E-6 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAA_03317 4ca24569ee351fe2d02371b99d185cd2 572 SUPERFAMILY SSF52467 224 371 1.82E-7 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_03710 45139cdb772725b9b830d21e864a272e 305 SUPERFAMILY SSF54211 134 278 4.93E-52 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_03710 45139cdb772725b9b830d21e864a272e 305 Gene3D G3DSA:3.30.1700.10 129 305 1.0E-70 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAA_03710 45139cdb772725b9b830d21e864a272e 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 3.9E-142 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAA_03710 45139cdb772725b9b830d21e864a272e 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.3E-108 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAA_03710 45139cdb772725b9b830d21e864a272e 305 Gene3D G3DSA:3.30.230.20 1 128 9.4E-52 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAA_03710 45139cdb772725b9b830d21e864a272e 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.109 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VAA_03710 45139cdb772725b9b830d21e864a272e 305 SUPERFAMILY SSF54211 3 125 1.82E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02711 a9300e4d597a9e32b2b167c76606c36b 304 Gene3D G3DSA:3.40.50.620 9 213 3.0E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02711 a9300e4d597a9e32b2b167c76606c36b 304 PIRSF PIRSF002936 1 304 1.7E-156 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAA_02711 a9300e4d597a9e32b2b167c76606c36b 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 1.3E-162 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAA_02711 a9300e4d597a9e32b2b167c76606c36b 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 4.1E-64 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VAA_02711 a9300e4d597a9e32b2b167c76606c36b 304 SUPERFAMILY SSF52402 8 211 2.87E-74 T 13-10-2018 VAA_02711 a9300e4d597a9e32b2b167c76606c36b 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 57.498 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAA_02482 36af2896367f62f28fe0eaf7ca3dc813 371 TIGRFAM TIGR04371 methyltran_NanM: putative sugar O-methyltransferase 108 244 2.5E-24 T 13-10-2018 IPR030807 Putative sugar O-methyltransferase VAA_02482 36af2896367f62f28fe0eaf7ca3dc813 371 Pfam PF13489 Methyltransferase domain 115 276 4.4E-7 T 13-10-2018 VAA_02482 36af2896367f62f28fe0eaf7ca3dc813 371 Gene3D G3DSA:3.40.50.150 89 352 2.5E-8 T 13-10-2018 VAA_02482 36af2896367f62f28fe0eaf7ca3dc813 371 SUPERFAMILY SSF53335 67 245 1.59E-9 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 SMART SM00283 271 532 2.6E-47 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 SUPERFAMILY SSF58104 224 536 7.98E-61 T 13-10-2018 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 Gene3D G3DSA:1.10.287.950 203 534 2.1E-64 T 13-10-2018 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 SMART SM00304 203 256 2.2E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 497 2.3E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 9.8E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 9.8E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01422 9b8b8c37f25155618f820a851cb5705b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 9.8E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02120 06c3048c9e0ac9ea2bddb793eb6f989d 130 Pfam PF00376 MerR family regulatory protein 8 30 9.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02120 06c3048c9e0ac9ea2bddb793eb6f989d 130 Gene3D G3DSA:1.10.1660.10 5 116 1.9E-23 T 13-10-2018 VAA_02120 06c3048c9e0ac9ea2bddb793eb6f989d 130 Pfam PF09278 MerR, DNA binding 37 98 2.3E-15 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VAA_02120 06c3048c9e0ac9ea2bddb793eb6f989d 130 SUPERFAMILY SSF46955 6 117 6.59E-27 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_02120 06c3048c9e0ac9ea2bddb793eb6f989d 130 SMART SM00422 5 61 9.6E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02120 06c3048c9e0ac9ea2bddb793eb6f989d 130 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 5 118 4.4E-47 T 13-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VAA_03571 431633f83524191b6b178cfdc6815033 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.985 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_03571 431633f83524191b6b178cfdc6815033 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.7E-36 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_03571 431633f83524191b6b178cfdc6815033 402 Gene3D G3DSA:1.10.1740.10 312 401 1.3E-28 T 13-10-2018 VAA_03571 431633f83524191b6b178cfdc6815033 402 SUPERFAMILY SSF69055 301 399 4.19E-30 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_03571 431633f83524191b6b178cfdc6815033 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 2.3E-161 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_03571 431633f83524191b6b178cfdc6815033 402 SUPERFAMILY SSF51735 2 150 1.98E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03571 431633f83524191b6b178cfdc6815033 402 PIRSF PIRSF006205 1 402 2.3E-153 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_03571 431633f83524191b6b178cfdc6815033 402 SUPERFAMILY SSF55347 126 274 6.54E-62 T 13-10-2018 VAA_03571 431633f83524191b6b178cfdc6815033 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.1E-46 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_03571 431633f83524191b6b178cfdc6815033 402 Gene3D G3DSA:3.40.50.720 1 150 1.6E-53 T 13-10-2018 VAA_03571 431633f83524191b6b178cfdc6815033 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 2.7E-38 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VAA_01891 19dfa4756483299928dbdd78e4147fc7 255 SUPERFAMILY SSF52540 14 248 1.9E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01891 19dfa4756483299928dbdd78e4147fc7 255 Gene3D G3DSA:3.40.50.300 12 253 4.4E-79 T 13-10-2018 VAA_01891 19dfa4756483299928dbdd78e4147fc7 255 SMART SM00382 39 226 2.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01891 19dfa4756483299928dbdd78e4147fc7 255 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01891 19dfa4756483299928dbdd78e4147fc7 255 PIRSF PIRSF039085 11 254 3.6E-111 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAA_01891 19dfa4756483299928dbdd78e4147fc7 255 Pfam PF00005 ABC transporter 30 178 1.0E-39 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02022 32552bad545250633fd071bf180a543e 543 SUPERFAMILY SSF103190 47 175 2.67E-34 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_02022 32552bad545250633fd071bf180a543e 543 SUPERFAMILY SSF55785 224 321 9.42E-5 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02022 32552bad545250633fd071bf180a543e 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 540 7.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02022 32552bad545250633fd071bf180a543e 543 SMART SM00387 430 542 2.7E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02022 32552bad545250633fd071bf180a543e 543 SUPERFAMILY SSF55890 333 407 1.7E-7 T 13-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VAA_02022 32552bad545250633fd071bf180a543e 543 Gene3D G3DSA:3.30.450.20 44 174 1.2E-41 T 13-10-2018 VAA_02022 32552bad545250633fd071bf180a543e 543 Gene3D G3DSA:3.30.565.10 384 543 2.2E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02022 32552bad545250633fd071bf180a543e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 6.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02022 32552bad545250633fd071bf180a543e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 6.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02022 32552bad545250633fd071bf180a543e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 6.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02022 32552bad545250633fd071bf180a543e 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 539 6.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02022 32552bad545250633fd071bf180a543e 543 Pfam PF17203 Single cache domain 3 61 175 1.0E-18 T 13-10-2018 IPR033463 Single cache domain 3 VAA_02022 32552bad545250633fd071bf180a543e 543 Gene3D G3DSA:3.30.450.20 210 323 4.3E-14 T 13-10-2018 VAA_02022 32552bad545250633fd071bf180a543e 543 SUPERFAMILY SSF55874 425 539 1.83E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 SUPERFAMILY SSF47323 707 903 5.61E-35 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Gene3D G3DSA:3.10.330.110 612 673 0.0 T 13-10-2018 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 SUPERFAMILY SSF52374 51 713 1.36E-146 T 13-10-2018 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 52 903 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Gene3D G3DSA:3.90.740.10 274 460 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 268 450 1.7E-76 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Gene3D G3DSA:3.10.20.590 843 903 4.5E-23 T 13-10-2018 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Gene3D G3DSA:1.10.730.10 55 835 0.0 T 13-10-2018 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 531 549 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 200 216 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 232 245 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 602 612 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 174 191 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 569 591 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 PRINTS PR00985 Leucyl-tRNA synthetase signature 262 281 7.0E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 SUPERFAMILY SSF50677 273 461 3.45E-56 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Pfam PF08264 Anticodon-binding domain of tRNA 746 866 1.8E-15 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 464 617 8.9E-9 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 61 219 2.7E-26 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 664 696 1.8E-7 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 51 903 23.303 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 89 100 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01093 abea7bdee5fa326b8b4b87b1bb240624 904 Gene3D G3DSA:3.40.50.620 80 611 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Pfam PF13437 HlyD family secretion protein 198 300 2.1E-5 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Gene3D G3DSA:2.40.30.170 234 310 3.5E-9 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 SUPERFAMILY SSF111369 170 243 6.15E-5 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Gene3D G3DSA:1.10.287.470 102 164 3.8E-9 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 SUPERFAMILY SSF111369 101 160 5.23E-7 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Gene3D G3DSA:1.10.287.470 69 90 8.1E-7 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Gene3D G3DSA:1.10.287.470 170 198 3.5E-9 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Gene3D G3DSA:2.40.50.100 35 68 8.1E-7 T 13-10-2018 VAA_02807 c8b8b3ade3b9a17836275185ed459d0f 320 Gene3D G3DSA:2.40.50.100 199 233 3.5E-9 T 13-10-2018 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 2.1E-134 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PIRSF PIRSF001369 38 429 3.2E-172 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 Gene3D G3DSA:1.10.230.10 268 376 2.5E-149 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 SUPERFAMILY SSF48256 4 428 4.45E-169 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 Gene3D G3DSA:2.20.28.60 1 50 7.4E-27 T 13-10-2018 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 9.9E-239 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 Gene3D G3DSA:1.10.580.10 57 411 2.5E-149 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PRINTS PR00143 Citrate synthase signature 241 269 1.6E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PRINTS PR00143 Citrate synthase signature 296 316 1.6E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PRINTS PR00143 Citrate synthase signature 219 234 1.6E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PRINTS PR00143 Citrate synthase signature 165 178 1.6E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PRINTS PR00143 Citrate synthase signature 359 375 1.6E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_03416 d56d2cd31440e6a6470d78e23fe47610 429 PRINTS PR00143 Citrate synthase signature 379 393 1.6E-54 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 SUPERFAMILY SSF53383 9 383 2.13E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 Gene3D G3DSA:3.40.640.10 3 248 6.5E-82 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 3.2E-134 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 3.6E-200 T 13-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 PIRSF PIRSF001434 1 385 1.5E-128 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 Gene3D G3DSA:3.90.1150.10 249 387 2.9E-49 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02582 dd80169a546c11b9356ee5272cb7b408 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 SUPERFAMILY SSF55785 47 147 3.66E-18 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 SUPERFAMILY SSF55073 162 264 2.04E-26 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 SMART SM00086 103 146 7.4E-6 T 13-10-2018 IPR001610 PAC motif VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 Gene3D G3DSA:3.30.70.270 148 273 1.3E-30 T 13-10-2018 VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 267 1.5E-25 T 13-10-2018 IPR000160 GGDEF domain VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 252 1.7E-25 T 13-10-2018 IPR000160 GGDEF domain VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 Pfam PF08447 PAS fold 54 140 1.7E-21 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 46 153 9.3E-11 T 13-10-2018 IPR000014 PAS domain VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 Gene3D G3DSA:3.30.450.20 22 97 5.6E-12 T 13-10-2018 VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 SMART SM00267 146 274 1.3E-10 T 13-10-2018 IPR000160 GGDEF domain VAA_02878 92a0726d56f63a47ba692d3c0d50504e 275 Gene3D G3DSA:2.10.70.100 100 147 8.6E-13 T 13-10-2018 VAA_02116 f1167fe580700e73a9f622adf9275425 284 Pfam PF00085 Thioredoxin 7 109 1.4E-13 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VAA_02116 f1167fe580700e73a9f622adf9275425 284 Gene3D G3DSA:3.40.30.10 1 111 1.3E-21 T 13-10-2018 VAA_02116 f1167fe580700e73a9f622adf9275425 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.7E-11 T 13-10-2018 VAA_02116 f1167fe580700e73a9f622adf9275425 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.7E-24 T 13-10-2018 VAA_02116 f1167fe580700e73a9f622adf9275425 284 SUPERFAMILY SSF48452 111 246 4.91E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02116 f1167fe580700e73a9f622adf9275425 284 SUPERFAMILY SSF52833 3 112 1.75E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_02116 f1167fe580700e73a9f622adf9275425 284 Gene3D G3DSA:1.25.40.10 197 284 4.4E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02116 f1167fe580700e73a9f622adf9275425 284 Gene3D G3DSA:1.25.40.10 112 196 2.5E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02379 919e0f739f6c4f5a3fe646ad09bbe0b2 81 Gene3D G3DSA:3.10.20.30 1 81 6.8E-26 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_02379 919e0f739f6c4f5a3fe646ad09bbe0b2 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 4.3E-24 T 13-10-2018 VAA_02379 919e0f739f6c4f5a3fe646ad09bbe0b2 81 Pfam PF02597 ThiS family 4 81 7.7E-23 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VAA_02379 919e0f739f6c4f5a3fe646ad09bbe0b2 81 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 2 81 6.1E-14 T 13-10-2018 IPR010038 MoaD, archaeal-type VAA_02379 919e0f739f6c4f5a3fe646ad09bbe0b2 81 SUPERFAMILY SSF54285 1 81 2.94E-23 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 Gene3D G3DSA:3.30.1340.10 3 86 7.5E-27 T 13-10-2018 IPR035895 HPr-like superfamily VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 2.8E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 SUPERFAMILY SSF55594 5 91 1.96E-23 T 13-10-2018 IPR035895 HPr-like superfamily VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 4.8E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 4.8E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 4.8E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VAA_02735 68ffcf24058f83b31b035c0bc468356a 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 3.5E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 Gene3D G3DSA:2.60.40.10 14 127 4.9E-18 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 SMART SM00642 145 551 4.0E-5 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 22 99 8.4E-8 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 SUPERFAMILY SSF51445 124 552 3.91E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 19 640 2.3E-202 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 SUPERFAMILY SSF51011 568 660 7.19E-15 T 13-10-2018 VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 SUPERFAMILY SSF81296 19 135 2.13E-19 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 Gene3D G3DSA:2.60.40.1180 567 659 2.1E-6 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAA_02890 a0ac16681e2c9bb50b7f7bfce2ed9dc6 665 Gene3D G3DSA:3.20.20.80 128 563 3.7E-145 T 13-10-2018 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 Gene3D G3DSA:1.10.287.950 295 626 1.2E-71 T 13-10-2018 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 590 3.0E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 Pfam PF00672 HAMP domain 296 345 2.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 Pfam PF02743 Cache domain 40 257 2.7E-27 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 SMART SM00304 384 451 45.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 SMART SM00304 295 349 2.2E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 SUPERFAMILY SSF58104 317 626 4.32E-76 T 13-10-2018 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 SMART SM00283 364 625 5.6E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 Gene3D G3DSA:3.30.450.20 64 167 1.5E-57 T 13-10-2018 VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 SUPERFAMILY SSF103190 70 175 3.14E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_00340 2a3ffd330ddd4c959cfcfc63307a1487 626 Gene3D G3DSA:3.30.450.20 53 269 1.5E-57 T 13-10-2018 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.22 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.4E-84 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 SUPERFAMILY SSF55821 3 202 4.35E-86 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAA_03857 747a65ea63afb61671fb971c372d92bd 369 Gene3D G3DSA:3.90.870.10 1 206 2.7E-87 T 13-10-2018 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 SUPERFAMILY SSF142695 205 367 2.35E-47 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 PIRSF PIRSF001259 3 369 4.0E-130 T 13-10-2018 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.9E-74 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03857 747a65ea63afb61671fb971c372d92bd 369 Pfam PF00925 GTP cyclohydrolase II 207 367 4.0E-39 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAA_01649 d33deb178cd132afd299a6ad9a0c642e 166 Pfam PF10263 SprT-like family 15 115 2.1E-19 T 13-10-2018 IPR006640 SprT-like VAA_01649 d33deb178cd132afd299a6ad9a0c642e 166 Pfam PF17283 SprT-like zinc ribbon domain 121 161 1.1E-9 T 13-10-2018 IPR035240 SprT-like, zinc ribbon domain VAA_01649 d33deb178cd132afd299a6ad9a0c642e 166 SMART SM00731 12 161 2.6E-52 T 13-10-2018 IPR006640 SprT-like VAA_01649 d33deb178cd132afd299a6ad9a0c642e 166 Hamap MF_00746 Protein SprT [sprT]. 8 161 41.309 T 13-10-2018 IPR023483 Uncharacterised protein family SprT VAA_01798 7f6767dd770565df804600615a8be219 246 Gene3D G3DSA:3.60.15.10 1 218 1.3E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01798 7f6767dd770565df804600615a8be219 246 Pfam PF00753 Metallo-beta-lactamase superfamily 2 197 2.5E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01798 7f6767dd770565df804600615a8be219 246 SUPERFAMILY SSF56281 1 215 7.34E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01798 7f6767dd770565df804600615a8be219 246 SMART SM00849 1 197 1.9E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.514 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 Gene3D G3DSA:2.40.50.140 1 124 3.1E-63 T 13-10-2018 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.6E-70 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 Pfam PF00164 Ribosomal protein S12/S23 14 123 2.2E-42 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PIRSF PIRSF002133 1 124 4.3E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 SUPERFAMILY SSF50249 3 123 5.48E-52 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.8E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.8E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.8E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.8E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.8E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00130 bfd9ea52df7b36e6da15eae98db719ec 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.8E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02755 9444da2cd19aa08d9571bfaf8861a558 248 Pfam PF01553 Acyltransferase 57 180 5.5E-29 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_02755 9444da2cd19aa08d9571bfaf8861a558 248 SUPERFAMILY SSF69593 6 236 1.96E-57 T 13-10-2018 VAA_02755 9444da2cd19aa08d9571bfaf8861a558 248 SMART SM00563 67 182 3.0E-38 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_02755 9444da2cd19aa08d9571bfaf8861a558 248 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.1E-42 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VAA_03494 8a562c55197c28317e6dbc80ce7f9c34 395 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 32 263 2.0E-71 T 13-10-2018 IPR018642 Protein of unknown function DUF2066 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 SUPERFAMILY SSF48557 3 456 1.05E-140 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Pfam PF00206 Lyase 6 301 4.8E-89 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PIRSF PIRSF036456 1 624 0.0 T 13-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.742 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Gene3D G3DSA:1.10.275.10 1 107 7.8E-36 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 SUPERFAMILY SSF55729 466 585 9.24E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Gene3D G3DSA:1.10.40.30 363 433 1.3E-147 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.4E-204 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.6E-25 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Gene3D G3DSA:3.40.630.30 463 604 4.2E-27 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Gene3D G3DSA:1.20.200.10 108 446 1.3E-147 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 570 2.2E-8 T 13-10-2018 IPR000182 GNAT domain VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.5E-68 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.5E-68 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.5E-68 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.5E-68 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.5E-68 T 13-10-2018 VAA_02622 0cefe442a8a1807e0126c2a851d27658 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.5E-68 T 13-10-2018 VAA_01888 88d297089d0108dc3689485b8a176303 350 Gene3D G3DSA:3.40.190.10 133 238 8.7E-51 T 13-10-2018 VAA_01888 88d297089d0108dc3689485b8a176303 350 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 265 5.2E-31 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01888 88d297089d0108dc3689485b8a176303 350 Gene3D G3DSA:3.40.190.10 41 252 8.7E-51 T 13-10-2018 VAA_01888 88d297089d0108dc3689485b8a176303 350 SMART SM00062 46 275 1.2E-54 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01888 88d297089d0108dc3689485b8a176303 350 SUPERFAMILY SSF53850 37 267 7.77E-50 T 13-10-2018 VAA_02753 1b820ad842e5a395912f1d025234d6da 84 SUPERFAMILY SSF82657 4 82 4.97E-28 T 13-10-2018 IPR036065 BolA-like superfamily VAA_02753 1b820ad842e5a395912f1d025234d6da 84 Pfam PF01722 BolA-like protein 20 74 6.0E-14 T 13-10-2018 IPR002634 BolA protein VAA_02753 1b820ad842e5a395912f1d025234d6da 84 PIRSF PIRSF003113 2 83 2.1E-22 T 13-10-2018 IPR002634 BolA protein VAA_02753 1b820ad842e5a395912f1d025234d6da 84 Gene3D G3DSA:3.30.300.90 1 84 1.7E-32 T 13-10-2018 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 SUPERFAMILY SSF48179 199 351 1.1E-55 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 Gene3D G3DSA:1.10.1040.10 209 352 3.6E-53 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 Gene3D G3DSA:3.40.50.720 12 207 1.9E-50 T 13-10-2018 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 22 342 36.515 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 218 242 5.2E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 26 43 5.2E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 193 217 5.2E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 152 172 5.2E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 258 275 5.2E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 76 103 5.2E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 24 179 1.5E-45 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 200 338 6.5E-52 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 SUPERFAMILY SSF51735 23 198 1.07E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 PIRSF PIRSF000114 19 352 4.0E-95 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_02613 fca5aa96409426ceb3f8239859c19d3c 352 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 208 229 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VAA_01859 31803e03dcc78ecd6173fd23e9219bae 629 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 610 629 2.1E-5 T 13-10-2018 IPR020008 GlyGly-CTERM domain VAA_01859 31803e03dcc78ecd6173fd23e9219bae 629 Pfam PF11949 Protein of unknown function (DUF3466) 4 629 6.1E-141 T 13-10-2018 IPR022562 Protein of unknown function DUF3466 VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2997 3015 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 Gene3D G3DSA:2.150.10.10 2912 3122 5.7E-26 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3015 3033 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 Pfam PF08548 Peptidase M10 serralysin C terminal 3017 3106 3.3E-5 T 13-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3047 3140 4.3E-8 T 13-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 669 809 7.6E-49 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 814 955 5.9E-46 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 959 1100 9.0E-39 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 520 664 2.2E-52 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 376 518 6.9E-52 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3006 3024 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 PRINTS PR00313 NodO calcium binding signature 3028 3037 2.5E-7 T 13-10-2018 VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 PRINTS PR00313 NodO calcium binding signature 3001 3009 2.5E-7 T 13-10-2018 VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 PRINTS PR00313 NodO calcium binding signature 3010 3018 2.5E-7 T 13-10-2018 VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 PRINTS PR00313 NodO calcium binding signature 2989 3000 2.5E-7 T 13-10-2018 VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 SUPERFAMILY SSF51120 2965 3082 2.09E-23 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAA_02949 89aab1601f6b5ee1493e7ac90c5443dc 3144 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 581 650 0.0018 T 13-10-2018 IPR010221 VCBS repeat VAA_02082 6ef35baab3da479feb34993391d24bc0 195 SUPERFAMILY SSF54862 37 173 1.86E-30 T 13-10-2018 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 Gene3D G3DSA:3.30.70.20 136 185 3.3E-8 T 13-10-2018 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 2.3E-86 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 PIRSF PIRSF005784 3 188 9.5E-87 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.6E-17 T 13-10-2018 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_02082 6ef35baab3da479feb34993391d24bc0 195 Gene3D G3DSA:3.30.70.20 92 132 5.5E-6 T 13-10-2018 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 Pfam PF04060 Putative Fe-S cluster 44 75 2.1E-14 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_02082 6ef35baab3da479feb34993391d24bc0 195 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.833 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VAA_02082 6ef35baab3da479feb34993391d24bc0 195 Gene3D G3DSA:1.10.15.40 38 87 4.3E-8 T 13-10-2018 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 6.3E-125 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.609 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 Gene3D G3DSA:3.40.50.2020 7 302 8.0E-135 T 13-10-2018 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 Gene3D G3DSA:3.40.50.2020 148 290 8.0E-135 T 13-10-2018 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 SMART SM01400 4 121 5.7E-78 T 13-10-2018 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.7E-30 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VAA_03507 cb6bdbb337ab572a9715cbe3acd3a092 314 SUPERFAMILY SSF53271 69 306 9.88E-67 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_03713 ba4164c52ac70482500d010df61515e5 259 Pfam PF08478 POTRA domain, FtsQ-type 53 122 3.7E-16 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type VAA_03713 ba4164c52ac70482500d010df61515e5 259 Pfam PF03799 Cell division protein FtsQ 126 238 1.3E-23 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB VAA_03713 ba4164c52ac70482500d010df61515e5 259 Gene3D G3DSA:3.40.50.11690 124 251 1.4E-36 T 13-10-2018 VAA_03713 ba4164c52ac70482500d010df61515e5 259 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 21.137 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VAA_03713 ba4164c52ac70482500d010df61515e5 259 Gene3D G3DSA:3.10.20.310 54 122 1.4E-24 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 4.8E-14 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 4.8E-14 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 4.8E-14 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.6E-45 T 13-10-2018 IPR017926 Glutamine amidotransferase VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.1E-5 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.1E-5 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 SUPERFAMILY SSF52317 3 192 8.49E-48 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 Gene3D G3DSA:3.40.50.880 1 193 1.3E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 4.9E-53 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.2E-35 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 4.2E-35 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 4.2E-35 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 4.2E-35 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 4.2E-35 T 13-10-2018 VAA_02248 dcf78c67be91f11c08c7b87bf7ac7454 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 4.2E-35 T 13-10-2018 VAA_00757 c58b7191ee8a5676d6f81679476aaeaa 246 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 240 2.0E-74 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein VAA_00757 c58b7191ee8a5676d6f81679476aaeaa 246 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 246 55.79 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein VAA_00757 c58b7191ee8a5676d6f81679476aaeaa 246 Gene3D G3DSA:3.40.1350.60 81 245 1.0E-52 T 13-10-2018 VAA_00757 c58b7191ee8a5676d6f81679476aaeaa 246 Gene3D G3DSA:2.40.50.580 1 80 4.9E-31 T 13-10-2018 VAA_00757 c58b7191ee8a5676d6f81679476aaeaa 246 Pfam PF03749 Sugar fermentation stimulation protein 13 238 2.2E-75 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein VAA_03157 a9b9610294ffa3aa7fb884ef58d31ab4 139 Gene3D G3DSA:3.10.129.10 1 137 3.0E-41 T 13-10-2018 VAA_03157 a9b9610294ffa3aa7fb884ef58d31ab4 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 7.3E-37 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VAA_03157 a9b9610294ffa3aa7fb884ef58d31ab4 139 Pfam PF03061 Thioesterase superfamily 22 107 4.2E-17 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAA_03157 a9b9610294ffa3aa7fb884ef58d31ab4 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 6.8E-51 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VAA_03157 a9b9610294ffa3aa7fb884ef58d31ab4 139 PIRSF PIRSF003230 1 138 5.0E-47 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VAA_03157 a9b9610294ffa3aa7fb884ef58d31ab4 139 SUPERFAMILY SSF54637 7 130 1.87E-39 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_02548 e19d42b7f878d576ce12581916db5559 224 SUPERFAMILY SSF53098 39 212 2.62E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_02548 e19d42b7f878d576ce12581916db5559 224 SMART SM00479 43 216 3.6E-23 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_02548 e19d42b7f878d576ce12581916db5559 224 Gene3D G3DSA:3.30.420.10 38 214 1.9E-33 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_02548 e19d42b7f878d576ce12581916db5559 224 Pfam PF00929 Exonuclease 45 207 6.3E-19 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 22 82 2.9E-19 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 21 177 34.203 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 Pfam PF01467 Cytidylyltransferase-like 24 152 3.9E-19 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 Gene3D G3DSA:3.40.50.620 12 176 3.5E-53 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 23 175 6.0E-58 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 SUPERFAMILY SSF52374 22 176 2.25E-43 T 13-10-2018 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 68 92 1.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 131 153 1.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 39 1.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 39 60 1.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_02460 44c2b7541f40d38ba75d58a1b6f0cbd9 177 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 104 120 1.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 SUPERFAMILY SSF55874 261 427 4.45E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 2.2E-31 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 SUPERFAMILY SSF47384 192 271 1.65E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 5.3E-137 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 204 1.8E-6 T 13-10-2018 IPR000014 PAS domain VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 7.2E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Gene3D G3DSA:1.10.287.130 201 275 9.5E-21 T 13-10-2018 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 SMART SM00387 317 429 8.3E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Pfam PF00989 PAS fold 99 168 1.3E-7 T 13-10-2018 IPR013767 PAS fold GO:0006355 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Gene3D G3DSA:3.30.565.10 282 429 5.5E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 5.3E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 Gene3D G3DSA:3.30.450.20 85 200 1.1E-10 T 13-10-2018 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 5.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 5.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 5.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 5.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 SMART SM00091 98 164 9.1E-6 T 13-10-2018 IPR000014 PAS domain VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 SUPERFAMILY SSF55785 86 197 3.32E-11 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00542 8a9b37446bb9ca33fed17f9242a5daad 433 SMART SM00388 205 272 2.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02808 fc2fecbcd2c0da36cd5bcffdc470053b 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 6.0E-48 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VAA_02808 fc2fecbcd2c0da36cd5bcffdc470053b 219 SUPERFAMILY SSF56784 2 209 1.63E-28 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02808 fc2fecbcd2c0da36cd5bcffdc470053b 219 Gene3D G3DSA:1.20.1440.100 17 90 1.4E-53 T 13-10-2018 VAA_02808 fc2fecbcd2c0da36cd5bcffdc470053b 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 1.6E-28 T 13-10-2018 VAA_02808 fc2fecbcd2c0da36cd5bcffdc470053b 219 Gene3D G3DSA:3.40.50.1000 6 216 1.4E-53 T 13-10-2018 IPR023214 HAD superfamily VAA_02808 fc2fecbcd2c0da36cd5bcffdc470053b 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 188 4.0E-26 T 13-10-2018 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 SUPERFAMILY SSF158791 15 136 9.29E-19 T 13-10-2018 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 SUPERFAMILY SSF54631 139 270 4.3E-31 T 13-10-2018 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Gene3D G3DSA:1.10.357.20 277 453 6.2E-56 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Pfam PF03448 MgtE intracellular N domain 33 137 1.3E-16 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 SMART SM00924 31 140 1.9E-17 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 TIGRFAM TIGR00400 mgtE: magnesium transporter 28 452 9.0E-110 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 SMART SM00116 211 259 0.016 T 13-10-2018 IPR000644 CBS domain VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 SMART SM00116 147 200 0.0021 T 13-10-2018 IPR000644 CBS domain VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 SUPERFAMILY SSF161093 282 452 3.01E-49 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Gene3D G3DSA:1.25.60.10 4 135 3.8E-11 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Pfam PF01769 Divalent cation transporter 326 445 1.2E-26 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Gene3D G3DSA:3.10.580.10 137 263 4.4E-43 T 13-10-2018 VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Pfam PF00571 CBS domain 204 256 3.2E-7 T 13-10-2018 IPR000644 CBS domain VAA_01744 51b7fc42060f0beb999cda9d5c37a704 458 Pfam PF00571 CBS domain 140 198 2.5E-9 T 13-10-2018 IPR000644 CBS domain VAA_02828 c01044cb5966877c4a8c07d5c2c79935 565 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 409 423 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02828 c01044cb5966877c4a8c07d5c2c79935 565 Gene3D G3DSA:3.30.2350.10 353 564 4.6E-62 T 13-10-2018 VAA_02828 c01044cb5966877c4a8c07d5c2c79935 565 SUPERFAMILY SSF55120 359 562 1.52E-59 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02828 c01044cb5966877c4a8c07d5c2c79935 565 Pfam PF00849 RNA pseudouridylate synthase 371 518 1.4E-27 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02812 ed15b0000525b8c4ca8208c4553410d8 267 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 210 4.5E-16 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VAA_02812 ed15b0000525b8c4ca8208c4553410d8 267 Gene3D G3DSA:3.40.720.10 1 246 5.8E-32 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_02812 ed15b0000525b8c4ca8208c4553410d8 267 SUPERFAMILY SSF53649 1 253 1.74E-49 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_3150 df79720723eee914d3966327bdb29e00 359 Hamap MF_00567 Quinolinate synthase A [nadA]. 7 353 66.382 T 13-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAA_3150 df79720723eee914d3966327bdb29e00 359 Gene3D G3DSA:3.40.50.10800 121 346 1.4E-93 T 13-10-2018 VAA_3150 df79720723eee914d3966327bdb29e00 359 SUPERFAMILY SSF142754 35 347 2.48E-105 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAA_3150 df79720723eee914d3966327bdb29e00 359 Gene3D G3DSA:3.40.50.10800 206 301 1.4E-93 T 13-10-2018 VAA_3150 df79720723eee914d3966327bdb29e00 359 Gene3D G3DSA:3.40.50.10800 38 328 1.4E-93 T 13-10-2018 VAA_3150 df79720723eee914d3966327bdb29e00 359 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 34 347 1.9E-114 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAA_3150 df79720723eee914d3966327bdb29e00 359 Pfam PF02445 Quinolinate synthetase A protein 38 346 1.2E-101 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 Gene3D G3DSA:3.30.2130.30 3 183 3.7E-34 T 13-10-2018 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 Gene3D G3DSA:3.40.50.620 184 406 7.3E-51 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_01160 9e64192045696d9aefcc10e592b66dae 491 SUPERFAMILY SSF143437 10 182 2.96E-48 T 13-10-2018 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 SUPERFAMILY SSF52821 412 490 6.29E-12 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01160 9e64192045696d9aefcc10e592b66dae 491 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 184 378 1.6E-70 T 13-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 SUPERFAMILY SSF52402 183 381 2.43E-41 T 13-10-2018 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 Gene3D G3DSA:3.40.250.10 407 490 1.9E-10 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01160 9e64192045696d9aefcc10e592b66dae 491 Pfam PF02926 THUMP domain 69 165 1.0E-22 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 13 382 6.0E-114 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 SMART SM00981 84 174 2.8E-24 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 491 221.719 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VAA_01160 9e64192045696d9aefcc10e592b66dae 491 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 391 491 7.9E-42 T 13-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VAA_00764 9a8513c614e5ce3805b210c8b89358ea 381 Gene3D G3DSA:1.10.10.2840 255 381 6.8E-20 T 13-10-2018 VAA_00764 9a8513c614e5ce3805b210c8b89358ea 381 Pfam PF05651 Putative sugar diacid recognition 4 136 5.5E-52 T 13-10-2018 IPR008599 Putative sugar diacid recognition VAA_00764 9a8513c614e5ce3805b210c8b89358ea 381 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 377 6.5E-20 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 TIGRFAM TIGR00767 rho: transcription termination factor Rho 10 425 2.0E-219 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 SUPERFAMILY SSF50249 56 133 2.18E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 427 247.447 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Pfam PF07497 Rho termination factor, RNA-binding domain 60 133 3.9E-32 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Gene3D G3DSA:2.40.50.140 56 125 2.1E-34 T 13-10-2018 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Pfam PF07498 Rho termination factor, N-terminal domain 13 55 2.1E-16 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 SMART SM00959 13 55 2.0E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Gene3D G3DSA:3.40.50.300 138 425 1.2E-134 T 13-10-2018 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Gene3D G3DSA:1.10.720.10 7 55 3.7E-23 T 13-10-2018 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 SMART SM00382 178 363 1.6E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 SUPERFAMILY SSF52540 98 379 3.07E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 168 371 7.1E-23 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 SMART SM00357 60 126 4.0E-18 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_00613 24de2dea0d4f46893011f59fefcbf661 427 SUPERFAMILY SSF68912 9 54 8.63E-12 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VAA_01673 8b0f6d346def1a3ca9e63f1df2cf495b 330 Gene3D G3DSA:3.40.718.10 1 329 1.4E-120 T 13-10-2018 VAA_01673 8b0f6d346def1a3ca9e63f1df2cf495b 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 35.966 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VAA_01673 8b0f6d346def1a3ca9e63f1df2cf495b 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 1.3E-125 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VAA_01673 8b0f6d346def1a3ca9e63f1df2cf495b 330 SUPERFAMILY SSF53659 4 326 1.47E-111 T 13-10-2018 VAA_01673 8b0f6d346def1a3ca9e63f1df2cf495b 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 7.1E-105 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VAA_00311 afc3b83f918582c07410f8ee07933523 139 Pfam PF06476 Protein of unknown function (DUF1090) 22 129 2.4E-31 T 13-10-2018 IPR009468 Protein of unknown function DUF1090 VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 SMART SM00530 31 86 1.8E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 Pfam PF01381 Helix-turn-helix 32 84 1.6E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 Gene3D G3DSA:1.10.260.40 26 92 2.5E-16 T 13-10-2018 VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 Gene3D G3DSA:2.60.120.10 93 205 4.6E-24 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 Pfam PF07883 Cupin domain 145 204 3.0E-9 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 SUPERFAMILY SSF51182 98 204 2.52E-24 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_01000 fad1b28742d5c24b1fa7c58991a6f27f 207 SUPERFAMILY SSF47413 26 90 1.77E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 Pfam PF00857 Isochorismatase family 70 239 8.2E-37 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 Gene3D G3DSA:3.40.50.850 39 244 6.4E-77 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PIRSF PIRSF001111 39 330 1.1E-121 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 Gene3D G3DSA:1.10.1200.10 248 326 4.7E-18 T 13-10-2018 IPR036736 ACP-like superfamily VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 SUPERFAMILY SSF47336 256 328 3.93E-10 T 13-10-2018 IPR036736 ACP-like superfamily VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 Pfam PF00550 Phosphopantetheine attachment site 258 317 6.6E-7 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PRINTS PR01398 Isochorismatase signature 40 52 3.3E-43 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PRINTS PR01398 Isochorismatase signature 221 238 3.3E-43 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PRINTS PR01398 Isochorismatase signature 203 221 3.3E-43 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PRINTS PR01398 Isochorismatase signature 118 137 3.3E-43 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PRINTS PR01398 Isochorismatase signature 147 169 3.3E-43 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 PRINTS PR01398 Isochorismatase signature 101 118 3.3E-43 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 VAA_02395 6d3121aa357f7ca5f74b37fc11b32952 345 SUPERFAMILY SSF52499 36 246 7.33E-61 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SUPERFAMILY SSF50249 97 187 6.51E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SUPERFAMILY SSF50249 581 663 1.08E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Gene3D G3DSA:2.40.50.140 579 665 1.3E-33 T 13-10-2018 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Gene3D G3DSA:2.40.50.140 15 96 2.1E-27 T 13-10-2018 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SMART SM00955 207 537 7.6E-115 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Pfam PF08206 Ribonuclease B OB domain 38 93 5.4E-16 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 ProSitePatterns PS01175 Ribonuclease II family signature. 504 528 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Pfam PF00575 S1 RNA binding domain 578 660 5.4E-11 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SUPERFAMILY SSF50249 206 576 1.66E-105 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Hamap MF_01036 Exoribonuclease 2 [rnb]. 15 664 42.03 T 13-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Pfam PF00773 RNB domain 207 535 2.2E-83 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 Gene3D G3DSA:2.40.50.640 97 171 4.3E-28 T 13-10-2018 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SUPERFAMILY SSF50249 22 94 1.08E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 20 662 2.0E-183 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SMART SM00357 37 93 1.3E-8 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 15 663 0.0 T 13-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VAA_01066 17776e7cb3ccf76d1ee73794728e50d5 683 SMART SM00316 580 664 2.1E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_00208 58f3e9a271c4010731d7335ef61680bb 254 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.566 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VAA_00208 58f3e9a271c4010731d7335ef61680bb 254 SUPERFAMILY SSF110399 1 236 1.44E-83 T 13-10-2018 VAA_00208 58f3e9a271c4010731d7335ef61680bb 254 Gene3D G3DSA:3.20.20.70 1 253 7.7E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00208 58f3e9a271c4010731d7335ef61680bb 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 8.8E-108 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 Gene3D G3DSA:3.40.140.10 180 295 2.6E-26 T 13-10-2018 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 4.4E-41 T 13-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 141 3.8E-13 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 SUPERFAMILY SSF53927 152 282 3.01E-35 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 PIRSF PIRSF006334 14 295 2.3E-104 T 13-10-2018 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 SUPERFAMILY SSF53927 1 146 6.69E-41 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.427 T 13-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 293 2.0E-100 T 13-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VAA_03099 89adc01bac51f1bd3b3ea42058aafca4 295 Gene3D G3DSA:3.40.140.10 29 179 9.3E-44 T 13-10-2018 VAA_01462 4c207f9a31830f0aadd64bbb73566fc0 176 SUPERFAMILY SSF53098 3 175 6.83E-31 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_01462 4c207f9a31830f0aadd64bbb73566fc0 176 Pfam PF00929 Exonuclease 7 171 2.8E-13 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01462 4c207f9a31830f0aadd64bbb73566fc0 176 SMART SM00479 5 176 1.0E-4 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01462 4c207f9a31830f0aadd64bbb73566fc0 176 Gene3D G3DSA:3.30.420.10 1 176 1.1E-36 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00268 0b4792cf9eb5faed49a4b7df07e779e7 84 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 18 79 1.6E-15 T 13-10-2018 IPR014318 Phage shock protein, PspG VAA_00268 0b4792cf9eb5faed49a4b7df07e779e7 84 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 16 79 1.2E-22 T 13-10-2018 IPR014318 Phage shock protein, PspG VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 SMART SM00388 461 530 6.4E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 Gene3D G3DSA:1.10.287.130 466 527 6.2E-34 T 13-10-2018 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 Gene3D G3DSA:3.40.50.2300 722 854 1.6E-32 T 13-10-2018 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 SUPERFAMILY SSF55874 529 683 2.49E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 SUPERFAMILY SSF52172 728 844 3.98E-30 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 Gene3D G3DSA:3.30.565.10 528 680 6.2E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 681 4.7E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 3.8E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 SUPERFAMILY SSF47384 453 519 5.89E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 SMART SM00387 574 683 3.0E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 SMART SM00448 728 838 7.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00957 10ff850aae9ac6f0af11e39dd4890d2b 859 Pfam PF00072 Response regulator receiver domain 730 838 1.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01119 c56cf92ae21924284e2ce89d6c21a1bf 390 SUPERFAMILY SSF48208 74 288 3.2E-14 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAA_01119 c56cf92ae21924284e2ce89d6c21a1bf 390 Gene3D G3DSA:1.50.10.20 75 273 2.4E-9 T 13-10-2018 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 Pfam PF02805 Metal binding domain of Ada 12 75 9.7E-29 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 SUPERFAMILY SSF57884 1 90 3.01E-34 T 13-10-2018 IPR035451 Ada-like domain superfamily VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 SUPERFAMILY SSF46689 142 191 1.61E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 Pfam PF12833 Helix-turn-helix domain 111 188 4.8E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 Pfam PF06029 AlkA N-terminal domain 199 264 2.2E-17 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 141 183 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 Gene3D G3DSA:1.10.10.60 84 192 2.0E-24 T 13-10-2018 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 SUPERFAMILY SSF46689 90 137 2.33E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 SMART SM00342 104 187 4.4E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 SMART SM01009 198 270 3.5E-5 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 Gene3D G3DSA:3.30.310.20 198 268 1.7E-14 T 13-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 Gene3D G3DSA:3.40.10.10 4 77 9.9E-30 T 13-10-2018 IPR035451 Ada-like domain superfamily VAA_02783 8b2b0b07810f782d7ebc30bb83f8c817 271 SUPERFAMILY SSF55945 199 262 1.33E-16 T 13-10-2018 VAA_02752 73bd5ef29a846ec19a01e0230d559965 102 SUPERFAMILY SSF52091 4 96 2.75E-17 T 13-10-2018 IPR036513 STAS domain superfamily VAA_02752 73bd5ef29a846ec19a01e0230d559965 102 Gene3D G3DSA:3.30.750.24 6 100 8.6E-14 T 13-10-2018 IPR036513 STAS domain superfamily VAA_02752 73bd5ef29a846ec19a01e0230d559965 102 Pfam PF13466 STAS domain 16 93 1.0E-17 T 13-10-2018 IPR002645 STAS domain VAA_00768 9daaac616ef19a59caa9bb9fa616a560 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 295 1.6E-18 T 13-10-2018 VAA_00768 9daaac616ef19a59caa9bb9fa616a560 337 PIRSF PIRSF002825 3 337 1.4E-97 T 13-10-2018 IPR026045 Ferric binding protein VAA_00768 9daaac616ef19a59caa9bb9fa616a560 337 SUPERFAMILY SSF53850 24 332 2.78E-72 T 13-10-2018 VAA_00768 9daaac616ef19a59caa9bb9fa616a560 337 Gene3D G3DSA:3.40.190.10 120 328 1.3E-122 T 13-10-2018 VAA_00768 9daaac616ef19a59caa9bb9fa616a560 337 Gene3D G3DSA:3.40.190.10 25 297 1.3E-122 T 13-10-2018 VAA_02785 151a9d3d166dc3eef90ab89dbb876788 119 Pfam PF04219 Protein of unknown function, DUF 12 100 8.0E-35 T 13-10-2018 IPR007335 Protein of unknown function DUF413 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 ProSitePatterns PS00104 EPSP synthase signature 1. 135 149 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 52 466 1.2E-151 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 SUPERFAMILY SSF55205 46 469 4.32E-143 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 Gene3D G3DSA:3.65.10.10 65 269 1.1E-158 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 59 470 2.9E-140 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 55 471 34.356 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 PIRSF PIRSF000505 46 471 2.0E-154 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 ProSitePatterns PS00885 EPSP synthase signature 2. 384 402 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VAA_02182 4c47cbd7333a5d1414e518bb1c558ac3 471 Gene3D G3DSA:3.65.10.10 287 464 1.1E-158 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAA_02095 f83a13337030bc130b5ea239792a2358 421 PIRSF PIRSF001563 7 420 5.9E-104 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VAA_02095 f83a13337030bc130b5ea239792a2358 421 SUPERFAMILY SSF53244 289 418 7.69E-32 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_02095 f83a13337030bc130b5ea239792a2358 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VAA_02095 f83a13337030bc130b5ea239792a2358 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 1.8E-102 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VAA_02095 f83a13337030bc130b5ea239792a2358 421 SUPERFAMILY SSF53623 13 286 3.01E-84 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_02095 f83a13337030bc130b5ea239792a2358 421 Gene3D G3DSA:3.40.1190.10 1 287 1.5E-89 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_02095 f83a13337030bc130b5ea239792a2358 421 Pfam PF08245 Mur ligase middle domain 54 193 2.2E-7 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAA_02095 f83a13337030bc130b5ea239792a2358 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 348 6.9E-8 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAA_02095 f83a13337030bc130b5ea239792a2358 421 Gene3D G3DSA:3.90.190.20 289 420 3.8E-34 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 Gene3D G3DSA:3.40.190.10 165 269 1.4E-40 T 13-10-2018 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 Pfam PF03466 LysR substrate binding domain 87 283 9.3E-35 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 Gene3D G3DSA:3.40.190.10 94 288 1.4E-40 T 13-10-2018 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 SUPERFAMILY SSF53850 99 289 2.33E-29 T 13-10-2018 VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 SUPERFAMILY SSF46785 1 85 7.12E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01314 398b8d32ea5e0c53ab89206e428bd0eb 294 Gene3D G3DSA:1.10.10.10 1 93 1.8E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 Gene3D G3DSA:1.10.10.10 1 91 1.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 SUPERFAMILY SSF53850 89 291 2.65E-32 T 13-10-2018 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.0E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 Gene3D G3DSA:3.40.190.10 92 286 4.5E-28 T 13-10-2018 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 Gene3D G3DSA:3.40.190.10 165 265 4.5E-28 T 13-10-2018 VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 Pfam PF03466 LysR substrate binding domain 89 290 1.2E-36 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00585 c55fb00274f3b70d89cac5d14c596ae8 296 SUPERFAMILY SSF46785 1 85 7.5E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03382 c352298741f2014d7080a8763d28062e 164 Gene3D G3DSA:2.40.50.180 39 148 8.2E-43 T 13-10-2018 VAA_03382 c352298741f2014d7080a8763d28062e 164 SMART SM00260 16 153 3.3E-50 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03382 c352298741f2014d7080a8763d28062e 164 Pfam PF01584 CheW-like domain 20 155 5.0E-40 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03382 c352298741f2014d7080a8763d28062e 164 SUPERFAMILY SSF50341 14 158 1.2E-41 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_03382 c352298741f2014d7080a8763d28062e 164 Gene3D G3DSA:2.30.30.40 22 147 8.2E-43 T 13-10-2018 VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 Pfam PF00155 Aminotransferase class I and II 67 411 3.4E-71 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 26 419 52.703 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 SUPERFAMILY SSF53383 26 420 4.87E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 265 274 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 Gene3D G3DSA:3.40.640.10 82 320 2.6E-133 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 Gene3D G3DSA:3.90.1150.10 64 411 2.6E-133 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_00936 23b25a5bdacd5eab4da0c4568af885b1 422 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 29 421 1.0E-205 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VAA_00114 cd6ea22ea1e710c93e9dc3bf12eccfe5 154 Gene3D G3DSA:3.40.50.300 2 152 2.8E-47 T 13-10-2018 VAA_00114 cd6ea22ea1e710c93e9dc3bf12eccfe5 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.6E-50 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VAA_00114 cd6ea22ea1e710c93e9dc3bf12eccfe5 154 SUPERFAMILY SSF52540 28 127 5.09E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00114 cd6ea22ea1e710c93e9dc3bf12eccfe5 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 134 9.1E-42 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 SMART SM00316 3 64 3.7 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 SMART SM00316 145 207 10.0 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 SMART SM00316 69 132 0.0025 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 Gene3D G3DSA:1.10.10.10 215 277 1.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 PIRSF PIRSF012524 1 277 3.0E-99 T 13-10-2018 IPR014464 Conserved virulence factor B VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 Pfam PF13509 S1 domain 71 132 1.3E-6 T 13-10-2018 IPR039566 Conserved virulence factor B, S1 domain VAA_01879 9c2e36c97d2c7ddd7f3d20417bf0a126 277 Pfam PF13509 S1 domain 4 63 2.8E-21 T 13-10-2018 IPR039566 Conserved virulence factor B, S1 domain VAA_00238 4f8f2e41c138620c4e6835bf6db28b72 238 SUPERFAMILY SSF75625 1 237 1.14E-77 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00238 4f8f2e41c138620c4e6835bf6db28b72 238 Gene3D G3DSA:1.10.10.200 17 78 5.5E-17 T 13-10-2018 IPR017856 Integrase-like, N-terminal VAA_00238 4f8f2e41c138620c4e6835bf6db28b72 238 Gene3D G3DSA:3.30.70.980 83 235 3.9E-45 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00238 4f8f2e41c138620c4e6835bf6db28b72 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.822 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00238 4f8f2e41c138620c4e6835bf6db28b72 238 Gene3D G3DSA:3.30.70.980 131 202 3.9E-45 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00238 4f8f2e41c138620c4e6835bf6db28b72 238 Pfam PF01709 Transcriptional regulator 5 236 2.8E-73 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Pfam PF10509 Galactokinase galactose-binding signature 37 85 1.2E-21 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 SUPERFAMILY SSF55060 232 408 5.12E-53 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Gene3D G3DSA:3.30.230.10 49 228 2.9E-133 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 SUPERFAMILY SSF74650 419 637 1.19E-65 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00473 Galactokinase signature 139 157 5.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00473 Galactokinase signature 119 130 5.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00473 Galactokinase signature 54 72 5.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00473 Galactokinase signature 290 304 5.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Pfam PF08544 GHMP kinases C terminal 306 388 2.0E-11 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00959 Mevalonate kinase family signature 146 168 9.8E-44 T 13-10-2018 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00959 Mevalonate kinase family signature 52 76 9.8E-44 T 13-10-2018 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00959 Mevalonate kinase family signature 355 372 9.8E-44 T 13-10-2018 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 PRINTS PR00959 Mevalonate kinase family signature 189 208 9.8E-44 T 13-10-2018 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 SUPERFAMILY SSF54211 25 230 1.67E-65 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 588 597 - T 13-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 TIGRFAM TIGR00131 gal_kin: galactokinase 32 407 9.7E-149 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 ProSitePatterns PS00106 Galactokinase signature. 54 65 - T 13-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Gene3D G3DSA:2.70.98.10 423 639 1.6E-69 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Gene3D G3DSA:3.30.70.890 229 384 2.9E-133 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 148 159 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Hamap MF_00246 Galactokinase [galK]. 52 408 43.965 T 13-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Pfam PF01263 Aldose 1-epimerase 434 638 2.0E-55 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VAA_03650 bcc4c189fcabb7953297260b28b374ef 639 Pfam PF00288 GHMP kinases N terminal domain 141 208 8.9E-12 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 PIRSF PIRSF000676 1 316 8.8E-79 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.7E-13 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 SUPERFAMILY SSF55060 178 295 4.68E-32 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 PRINTS PR00958 Homoserine kinase signature 181 198 1.2E-30 T 13-10-2018 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 PRINTS PR00958 Homoserine kinase signature 103 118 1.2E-30 T 13-10-2018 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 PRINTS PR00958 Homoserine kinase signature 143 156 1.2E-30 T 13-10-2018 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 PRINTS PR00958 Homoserine kinase signature 10 25 1.2E-30 T 13-10-2018 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 PRINTS PR00958 Homoserine kinase signature 260 275 1.2E-30 T 13-10-2018 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 SUPERFAMILY SSF54211 3 191 4.63E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 1.5E-109 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 Gene3D G3DSA:3.30.230.10 5 173 7.5E-89 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.226 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 Gene3D G3DSA:3.30.70.890 174 283 7.5E-89 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VAA_03683 f071019c6061ed5ca478f965d4e177e0 318 Pfam PF08544 GHMP kinases C terminal 217 293 2.1E-8 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Gene3D G3DSA:2.60.40.10 5 220 1.6E-49 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 SUPERFAMILY SSF81296 21 102 1.54E-11 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 SUPERFAMILY SSF51011 623 726 1.01E-27 T 13-10-2018 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Pfam PF00128 Alpha amylase, catalytic domain 275 347 4.0E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Gene3D G3DSA:2.60.40.1180 623 727 1.4E-27 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 91 726 40.851 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 133 207 2.1E-18 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 SUPERFAMILY SSF51445 179 616 1.19E-110 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 SUPERFAMILY SSF81296 139 193 3.22E-6 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 116 722 2.0E-244 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Gene3D G3DSA:3.20.20.80 224 622 1.7E-162 T 13-10-2018 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 5.5E-17 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 SMART SM00642 250 594 1.2E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_01941 4674307569908b41ed6df3899a1ed7ec 729 PIRSF PIRSF000463 9 729 2.1E-279 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 SMART SM00739 4 31 6.1E-4 T 13-10-2018 IPR005824 KOW VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.1E-39 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 Gene3D G3DSA:2.30.30.30 2 104 8.1E-40 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 Pfam PF00467 KOW motif 8 37 3.7E-5 T 13-10-2018 IPR005824 KOW VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.855 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 SUPERFAMILY SSF50104 4 102 1.69E-34 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAA_02681 90f9c97b4c2183de9d5d15163ac30204 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 6.9E-24 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 9.4E-48 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 SMART SM00100 17 134 8.7E-8 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Pfam PF00571 CBS domain 226 278 7.1E-11 T 13-10-2018 IPR000644 CBS domain VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Pfam PF00571 CBS domain 152 214 2.8E-6 T 13-10-2018 IPR000644 CBS domain VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 SUPERFAMILY SSF51206 7 129 1.96E-28 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Gene3D G3DSA:3.10.580.10 144 282 4.9E-31 T 13-10-2018 VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 4.0E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 7.3E-47 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 Gene3D G3DSA:2.60.120.10 1 134 7.6E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 SMART SM00116 233 280 2.4E-7 T 13-10-2018 IPR000644 CBS domain VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 SMART SM00116 159 216 0.6 T 13-10-2018 IPR000644 CBS domain VAA_01408 32cdd3080741eb5e712f88e667c2c62e 629 SUPERFAMILY SSF54631 145 279 3.94E-26 T 13-10-2018 VAA_02017 c004d1850eac4c2fed1d1eb457481847 176 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 13 170 3.3E-37 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAA_02017 c004d1850eac4c2fed1d1eb457481847 176 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 13 171 1.1E-45 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAA_03225 48b65a08389363e35bab80bcc56f6e0c 179 Gene3D G3DSA:1.20.1550.10 5 178 1.0E-57 T 13-10-2018 IPR023380 DsbB-like superfamily VAA_03225 48b65a08389363e35bab80bcc56f6e0c 179 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 11 172 21.958 T 13-10-2018 IPR022920 Disulphide bond formation protein DsbB VAA_03225 48b65a08389363e35bab80bcc56f6e0c 179 Pfam PF02600 Disulfide bond formation protein DsbB 16 164 3.7E-43 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VAA_03225 48b65a08389363e35bab80bcc56f6e0c 179 SUPERFAMILY SSF158442 19 165 3.27E-43 T 13-10-2018 IPR023380 DsbB-like superfamily VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 SUPERFAMILY SSF52540 25 256 6.25E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 2.3E-33 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 1.3E-144 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-37 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 Gene3D G3DSA:1.10.8.60 187 260 3.7E-29 T 13-10-2018 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 3.2E-115 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 180.8 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 SUPERFAMILY SSF46785 262 332 2.01E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 SMART SM00382 56 183 1.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 Gene3D G3DSA:3.40.50.300 25 186 6.8E-41 T 13-10-2018 VAA_03163 81eb23a604e7f1e01b4ad146879699af 334 Gene3D G3DSA:1.10.10.10 262 334 4.5E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01683 17f1f6d5916d612ad794fd4f670f731c 323 SUPERFAMILY SSF48576 4 322 1.27E-103 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAA_01683 17f1f6d5916d612ad794fd4f670f731c 323 Gene3D G3DSA:1.10.600.10 1 323 2.2E-124 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAA_01683 17f1f6d5916d612ad794fd4f670f731c 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAA_01683 17f1f6d5916d612ad794fd4f670f731c 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAA_01683 17f1f6d5916d612ad794fd4f670f731c 323 Pfam PF00348 Polyprenyl synthetase 32 272 6.1E-77 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 SUPERFAMILY SSF50891 1 162 9.79E-57 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 Gene3D G3DSA:2.40.100.10 1 164 2.5E-63 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 PIRSF PIRSF001467 1 161 8.3E-28 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 155 5.8E-46 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.2E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.2E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_03167 7aa60537b7899d4a0af0f6b9951494e0 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.2E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VAA_01024 255c6d0fdc1181152414633d840d4dd0 636 SUPERFAMILY SSF53474 179 468 1.67E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01024 255c6d0fdc1181152414633d840d4dd0 636 Pfam PF01764 Lipase (class 3) 313 427 1.6E-16 T 13-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 412 5.7E-19 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 Gene3D G3DSA:3.40.50.720 205 412 2.0E-58 T 13-10-2018 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 SUPERFAMILY SSF48179 206 299 1.7E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 189 1.3E-59 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 PIRSF PIRSF500136 1 412 4.5E-146 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 PIRSF PIRSF000124 3 412 5.4E-81 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 SMART SM00984 316 411 2.4E-18 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 4.8E-27 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 SUPERFAMILY SSF52413 306 411 9.68E-22 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 Gene3D G3DSA:3.40.50.720 1 204 9.7E-65 T 13-10-2018 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 410 3.2E-121 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAA_01128 ee74e7c68026609b0b49becf6883214d 412 SUPERFAMILY SSF51735 4 199 2.71E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02092 65f52f44d796e721f4934480794c2857 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 3.2E-164 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VAA_02092 65f52f44d796e721f4934480794c2857 504 SUPERFAMILY SSF53271 249 482 2.75E-70 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_02092 65f52f44d796e721f4934480794c2857 504 Pfam PF13522 Glutamine amidotransferase domain 63 194 1.0E-16 T 13-10-2018 VAA_02092 65f52f44d796e721f4934480794c2857 504 Gene3D G3DSA:3.40.50.2020 276 440 5.4E-157 T 13-10-2018 VAA_02092 65f52f44d796e721f4934480794c2857 504 Gene3D G3DSA:3.60.20.10 2 411 5.4E-157 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02092 65f52f44d796e721f4934480794c2857 504 PIRSF PIRSF000485 1 480 2.2E-169 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VAA_02092 65f52f44d796e721f4934480794c2857 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 45.056 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VAA_02092 65f52f44d796e721f4934480794c2857 504 Pfam PF00156 Phosphoribosyl transferase domain 280 388 3.7E-6 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAA_02092 65f52f44d796e721f4934480794c2857 504 SUPERFAMILY SSF56235 2 256 1.46E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 SUPERFAMILY SSF51055 432 477 1.83E-14 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 Gene3D G3DSA:3.30.20.10 177 247 6.6E-78 T 13-10-2018 VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 Gene3D G3DSA:1.10.530.10 104 345 6.6E-78 T 13-10-2018 VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 Gene3D G3DSA:2.10.10.20 435 478 1.5E-14 T 13-10-2018 VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 Pfam PF00182 Chitinase class I 105 327 4.6E-32 T 13-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 SUPERFAMILY SSF53955 86 349 3.37E-53 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 SMART SM00495 514 559 2.4 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_00498 d24e5f1a66b68fe7585f76cebfdd4e10 562 SMART SM00495 435 477 2.3E-16 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 PIRSF PIRSF003180 1 403 1.4E-159 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 Pfam PF08668 HDOD domain 205 319 1.4E-13 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 SUPERFAMILY SSF141868 5 193 8.5E-28 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 Pfam PF00563 EAL domain 74 190 2.5E-14 T 13-10-2018 IPR001633 EAL domain VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 SMART SM00052 2 195 1.8E-4 T 13-10-2018 IPR001633 EAL domain VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 Gene3D G3DSA:1.10.3210.10 197 365 1.7E-19 T 13-10-2018 VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 Gene3D G3DSA:3.20.20.450 40 196 1.7E-17 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03170 f3e2fc27fc217d6cd411d3e3037d74c4 404 SUPERFAMILY SSF109604 181 399 9.42E-42 T 13-10-2018 VAA_00027 461e3237aa3584e1214f8b98f76cbbde 119 Gene3D G3DSA:3.10.180.10 6 118 1.8E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_00027 461e3237aa3584e1214f8b98f76cbbde 119 SUPERFAMILY SSF54593 6 117 5.1E-22 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_00027 461e3237aa3584e1214f8b98f76cbbde 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 7.9E-10 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 13-10-2018 VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.0E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VAA_02693 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02042 a9357db7ab5fdcbe85c6601a2fe888ff 361 SUPERFAMILY SSF53822 60 360 4.71E-79 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_02042 a9357db7ab5fdcbe85c6601a2fe888ff 361 Gene3D G3DSA:3.40.50.2300 169 313 7.9E-114 T 13-10-2018 VAA_02042 a9357db7ab5fdcbe85c6601a2fe888ff 361 Gene3D G3DSA:3.40.50.2300 63 335 7.9E-114 T 13-10-2018 VAA_02042 a9357db7ab5fdcbe85c6601a2fe888ff 361 Pfam PF13407 Periplasmic binding protein domain 63 333 2.2E-60 T 13-10-2018 IPR025997 Periplasmic binding protein VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 SUPERFAMILY SSF51735 5 159 1.48E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 2.8E-31 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 SUPERFAMILY SSF55347 131 320 4.17E-78 T 13-10-2018 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 Gene3D G3DSA:3.40.50.720 7 330 2.5E-151 T 13-10-2018 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.487 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 Gene3D G3DSA:3.30.360.10 130 316 2.5E-151 T 13-10-2018 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 SMART SM00859 6 121 1.7E-39 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 PIRSF PIRSF000148 4 337 5.8E-133 T 13-10-2018 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 6.0E-132 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03430 8f590e2f738af744508bb21f4cb13c47 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 4.5E-62 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 2.1E-34 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 2.1E-34 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 2.1E-34 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 2.1E-34 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 2.1E-34 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 376 393 2.1E-34 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 SUPERFAMILY SSF55486 2 514 5.5E-90 T 13-10-2018 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PIRSF PIRSF006615 414 516 1.7E-41 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 PIRSF PIRSF006615 1 412 8.7E-158 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 Gene3D G3DSA:1.10.1370.30 1 411 6.3E-155 T 13-10-2018 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 Gene3D G3DSA:1.10.1370.30 412 516 3.2E-42 T 13-10-2018 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 9 409 2.3E-79 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_01785 2b5bfdc78f9c57a4c1b6dda1ed98817b 516 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 420 514 1.2E-17 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.2E-37 T 13-10-2018 IPR003004 GspF/PilC family VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.2E-37 T 13-10-2018 IPR003004 GspF/PilC family VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.2E-37 T 13-10-2018 IPR003004 GspF/PilC family VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.2E-37 T 13-10-2018 IPR003004 GspF/PilC family VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 Gene3D G3DSA:1.20.81.30 56 173 1.6E-38 T 13-10-2018 VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 Gene3D G3DSA:1.20.81.30 258 369 1.4E-25 T 13-10-2018 VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 8.0E-156 T 13-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.2E-24 T 13-10-2018 IPR018076 Type II secretion system F domain VAA_00651 bbd1bf8103e577b0ad9ef0374a7fb641 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.3E-34 T 13-10-2018 IPR018076 Type II secretion system F domain VAA_01834 bbe13335ae6d02bc7274fc1471f8a806 286 SUPERFAMILY SSF161098 10 275 2.62E-55 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01834 bbe13335ae6d02bc7274fc1471f8a806 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 3.9E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01834 bbe13335ae6d02bc7274fc1471f8a806 286 Gene3D G3DSA:1.10.3720.10 7 278 1.0E-54 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Gene3D G3DSA:3.40.50.300 181 370 1.3E-58 T 13-10-2018 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 SMART SM00382 614 780 9.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 SMART SM00382 221 363 1.9E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 SUPERFAMILY SSF52540 563 843 9.5E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Pfam PF07724 AAA domain (Cdc48 subfamily) 613 775 4.8E-39 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Gene3D G3DSA:3.40.50.300 567 777 7.4E-63 T 13-10-2018 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 663 681 1.4E-28 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 692 710 1.4E-28 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 618 636 1.4E-28 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 725 739 1.4E-28 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 16 863 0.0 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 SMART SM01086 780 870 6.1E-9 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 SUPERFAMILY SSF52540 182 562 7.87E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 648 666 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Gene3D G3DSA:3.40.50.300 371 561 3.1E-46 T 13-10-2018 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 356 7.7E-9 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Gene3D G3DSA:1.10.1780.10 8 162 7.3E-38 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 780 853 1.4E-11 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 27 76 2.0E-6 T 13-10-2018 IPR004176 Clp, N-terminal VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 SUPERFAMILY SSF81923 15 128 1.07E-14 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_02843 35091632ccde5f4083be10ed39a17aa4 875 Gene3D G3DSA:1.10.8.60 780 874 4.8E-10 T 13-10-2018 VAA_00579 cb3af11a2967fd2af7b3772f9094a706 275 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 54 237 4.1E-71 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VAA_00579 cb3af11a2967fd2af7b3772f9094a706 275 SUPERFAMILY SSF52540 58 248 1.86E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00579 cb3af11a2967fd2af7b3772f9094a706 275 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 58 241 27.222 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VAA_00579 cb3af11a2967fd2af7b3772f9094a706 275 Gene3D G3DSA:3.40.50.300 45 245 5.0E-57 T 13-10-2018 VAA_00579 cb3af11a2967fd2af7b3772f9094a706 275 Pfam PF01926 50S ribosome-binding GTPase 72 190 1.4E-19 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_01169 62527bc8d401a8be3915b3d879783e1b 380 Pfam PF12069 Protein of unknown function (DUF3549) 36 374 9.8E-136 T 13-10-2018 IPR021936 Protein of unknown function DUF3549 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 3.3E-16 T 13-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 Gene3D G3DSA:2.160.10.10 172 343 2.2E-69 T 13-10-2018 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 Gene3D G3DSA:3.30.70.2010 1 130 5.7E-37 T 13-10-2018 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 2.6E-178 T 13-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 Gene3D G3DSA:3.30.60.70 131 171 1.9E-20 T 13-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.966 T 13-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 SUPERFAMILY SSF51161 90 324 3.19E-36 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_03641 ef536e9b85519df08e784ff6e18758a7 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 6.9E-13 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 Gene3D G3DSA:3.40.50.300 187 379 7.6E-117 T 13-10-2018 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 118 391 64.535 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 Gene3D G3DSA:1.20.120.140 92 389 7.6E-117 T 13-10-2018 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 Pfam PF02881 SRP54-type protein, helical bundle domain 110 171 1.8E-13 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 SUPERFAMILY SSF47364 90 169 5.1E-22 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 SMART SM00962 190 391 8.7E-122 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 118 390 1.9E-115 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 SMART SM00382 189 390 1.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 364 377 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 SMART SM00963 95 175 2.4E-26 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 SUPERFAMILY SSF52540 187 391 1.15E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00448 528cdac659d20a4cae3d9148bc58828e 394 Pfam PF00448 SRP54-type protein, GTPase domain 191 390 4.7E-78 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_02834 4ee9555117e9fc83e04ad263c8e4b33e 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 490 1.8E-212 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA_02834 4ee9555117e9fc83e04ad263c8e4b33e 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 489 2.6E-178 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 SMART SM00448 182 302 2.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 SUPERFAMILY SSF50341 16 156 3.92E-35 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 Gene3D G3DSA:2.40.50.180 39 153 6.6E-28 T 13-10-2018 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 Gene3D G3DSA:2.30.30.40 23 147 6.6E-28 T 13-10-2018 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 PIRSF PIRSF002867 1 308 5.0E-102 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 Pfam PF01584 CheW-like domain 21 155 7.6E-34 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 SUPERFAMILY SSF52172 183 306 2.13E-26 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 SMART SM00260 17 153 1.6E-25 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 Pfam PF00072 Response regulator receiver domain 184 302 1.1E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03525 08ace45f9ef48fe5723ba80db09e8dd7 308 Gene3D G3DSA:3.40.50.2300 170 308 4.6E-26 T 13-10-2018 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 429 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 45 68 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 107 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 429 449 1.3E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VAA_03090 4926c602a702d488fe48654ebd128209 450 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 34 450 2.1E-119 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VAA_03090 4926c602a702d488fe48654ebd128209 450 Pfam PF13437 HlyD family secretion protein 301 417 1.1E-17 T 13-10-2018 VAA_03090 4926c602a702d488fe48654ebd128209 450 Gene3D G3DSA:2.40.30.170 339 427 1.6E-14 T 13-10-2018 VAA_03090 4926c602a702d488fe48654ebd128209 450 Gene3D G3DSA:2.40.50.100 302 338 1.6E-14 T 13-10-2018 VAA_03090 4926c602a702d488fe48654ebd128209 450 Gene3D G3DSA:1.10.287.470 207 294 1.6E-14 T 13-10-2018 VAA_00603 e2890cf76f02545ca13b50b51fa9074a 505 Gene3D G3DSA:3.40.140.10 237 432 1.7E-51 T 13-10-2018 VAA_00603 e2890cf76f02545ca13b50b51fa9074a 505 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 238 402 5.8E-21 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAA_00603 e2890cf76f02545ca13b50b51fa9074a 505 SUPERFAMILY SSF53927 232 454 2.86E-32 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_00603 e2890cf76f02545ca13b50b51fa9074a 505 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 356 391 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAA_00603 e2890cf76f02545ca13b50b51fa9074a 505 Gene3D G3DSA:3.40.50.300 25 226 6.8E-15 T 13-10-2018 VAA_01213 cca3d722b1367342bf54a558cc14041f 946 Pfam PF04851 Type III restriction enzyme, res subunit 160 348 2.8E-36 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_01213 cca3d722b1367342bf54a558cc14041f 946 Gene3D G3DSA:3.40.50.300 143 361 1.8E-41 T 13-10-2018 VAA_01213 cca3d722b1367342bf54a558cc14041f 946 SUPERFAMILY SSF52540 183 554 9.61E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01213 cca3d722b1367342bf54a558cc14041f 946 Gene3D G3DSA:3.90.1570.30 3 142 7.2E-7 T 13-10-2018 VAA_01213 cca3d722b1367342bf54a558cc14041f 946 Pfam PF08463 EcoEI R protein C-terminal 747 944 1.8E-60 T 13-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 VAA_01213 cca3d722b1367342bf54a558cc14041f 946 SUPERFAMILY SSF52540 138 383 5.05E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01213 cca3d722b1367342bf54a558cc14041f 946 SMART SM00487 158 376 1.9E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01213 cca3d722b1367342bf54a558cc14041f 946 Gene3D G3DSA:3.40.50.300 363 596 3.4E-47 T 13-10-2018 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 Gene3D G3DSA:1.10.150.170 112 218 2.0E-101 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.209 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 Pfam PF01795 MraW methylase family 5 315 5.0E-110 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 Gene3D G3DSA:3.40.50.150 10 315 2.0E-101 T 13-10-2018 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 SUPERFAMILY SSF53335 7 316 1.41E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 315 5.0E-119 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 SUPERFAMILY SSF81799 113 216 5.49E-31 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VAA_03724 bfc974bd16b98f66bf5527031459ec9e 316 PIRSF PIRSF004486 1 316 6.7E-101 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VAA_03372 6694d25be02e3c08c76802e6880bf620 405 SUPERFAMILY SSF48452 162 267 1.71E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03372 6694d25be02e3c08c76802e6880bf620 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 115 3.4E-28 T 13-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VAA_03372 6694d25be02e3c08c76802e6880bf620 405 Pfam PF14559 Tetratricopeptide repeat 178 245 5.1E-8 T 13-10-2018 VAA_03372 6694d25be02e3c08c76802e6880bf620 405 Gene3D G3DSA:1.25.40.10 154 298 4.6E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02230 f65bc3b60e2a7c748bc9bacc85efe4c1 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 2.8E-54 T 13-10-2018 IPR018724 2OG-Fe dioxygenase VAA_02230 f65bc3b60e2a7c748bc9bacc85efe4c1 219 Gene3D G3DSA:2.60.120.620 1 216 2.7E-53 T 13-10-2018 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 SUPERFAMILY SSF53383 1 390 1.81E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 Gene3D G3DSA:3.90.1150.10 11 389 2.7E-136 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 Pfam PF00155 Aminotransferase class I and II 27 389 5.1E-66 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 5.6E-29 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 5.6E-29 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 5.6E-29 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 5.6E-29 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01599 975a6efab3fd21200853ad835d82bb6e 393 Gene3D G3DSA:3.40.640.10 45 312 2.7E-136 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02084 50c8ca959fd9cfbb6173762c46be86bb 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 2.6E-140 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VAA_02084 50c8ca959fd9cfbb6173762c46be86bb 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 26.889 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VAA_02084 50c8ca959fd9cfbb6173762c46be86bb 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 3.2E-105 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VAA_02504 f085c3262fb6fd56aae8ca3c1cf10272 628 Gene3D G3DSA:3.40.50.720 279 609 1.3E-113 T 13-10-2018 VAA_02504 f085c3262fb6fd56aae8ca3c1cf10272 628 Pfam PF02719 Polysaccharide biosynthesis protein 284 578 1.7E-127 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VAA_02504 f085c3262fb6fd56aae8ca3c1cf10272 628 Gene3D G3DSA:3.40.50.720 142 265 1.1E-24 T 13-10-2018 VAA_02504 f085c3262fb6fd56aae8ca3c1cf10272 628 SUPERFAMILY SSF51735 282 594 3.31E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02504 f085c3262fb6fd56aae8ca3c1cf10272 628 SUPERFAMILY SSF53335 110 330 4.48E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02146 7d4edc77615bf129a8af0d7502e970a5 403 PIRSF PIRSF000014 10 403 3.9E-163 T 13-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VAA_02146 7d4edc77615bf129a8af0d7502e970a5 403 Gene3D G3DSA:1.10.3820.10 23 202 2.5E-37 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VAA_02146 7d4edc77615bf129a8af0d7502e970a5 403 SUPERFAMILY SSF46626 343 395 8.44E-5 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_02146 7d4edc77615bf129a8af0d7502e970a5 403 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 16 403 6.4E-189 T 13-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VAA_02146 7d4edc77615bf129a8af0d7502e970a5 403 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 25 196 1.8E-71 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VAA_02146 7d4edc77615bf129a8af0d7502e970a5 403 SUPERFAMILY SSF48695 21 196 4.08E-58 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 295 378 5.6E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 Gene3D G3DSA:1.10.8.410 329 379 8.9E-22 T 13-10-2018 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 SUPERFAMILY SSF64518 1 379 2.62E-97 T 13-10-2018 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 Gene3D G3DSA:1.20.1330.10 44 328 3.8E-78 T 13-10-2018 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 Gene3D G3DSA:3.30.70.2120 174 277 3.8E-78 T 13-10-2018 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 Pfam PF07196 Flagellin hook IN motif 200 248 3.1E-8 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 PRINTS PR00207 Flagellin signature 111 134 1.2E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 PRINTS PR00207 Flagellin signature 37 54 1.2E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 PRINTS PR00207 Flagellin signature 76 95 1.2E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03511 2d3bc9c4c58fe317ddfc7da904e5e502 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.3E-41 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_01054 e110ec3d600155f436ae12fb71957878 829 SUPERFAMILY SSF53706 38 701 9.42E-200 T 13-10-2018 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Gene3D G3DSA:2.40.40.20 705 828 1.1E-45 T 13-10-2018 VAA_01054 e110ec3d600155f436ae12fb71957878 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VAA_01054 e110ec3d600155f436ae12fb71957878 829 SMART SM00926 41 95 3.6E-13 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 13-10-2018 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 13-10-2018 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.3E-26 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAA_01054 e110ec3d600155f436ae12fb71957878 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 7.1E-93 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 5.4E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_01054 e110ec3d600155f436ae12fb71957878 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 13-10-2018 VAA_01054 e110ec3d600155f436ae12fb71957878 829 SUPERFAMILY SSF50692 688 828 7.25E-44 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAA_01054 e110ec3d600155f436ae12fb71957878 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.493 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VAA_01574 e9d2cd3148446416098f27b554c32f70 491 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 483 7.6E-156 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VAA_01574 e9d2cd3148446416098f27b554c32f70 491 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 4.2E-23 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VAA_01574 e9d2cd3148446416098f27b554c32f70 491 SUPERFAMILY SSF52317 194 399 1.09E-37 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_01574 e9d2cd3148446416098f27b554c32f70 491 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 491 202.482 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VAA_01574 e9d2cd3148446416098f27b554c32f70 491 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 440 4.1E-60 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VAA_01574 e9d2cd3148446416098f27b554c32f70 491 SUPERFAMILY SSF52540 6 240 1.35E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01574 e9d2cd3148446416098f27b554c32f70 491 Gene3D G3DSA:3.40.50.300 3 246 3.6E-57 T 13-10-2018 VAA_01574 e9d2cd3148446416098f27b554c32f70 491 Gene3D G3DSA:3.40.50.880 254 434 6.2E-19 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03002 4a529e889d6cc30abcdcc8faaec9a11a 326 Pfam PF01032 FecCD transport family 30 322 3.1E-55 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAA_03002 4a529e889d6cc30abcdcc8faaec9a11a 326 SUPERFAMILY SSF81345 11 323 5.75E-61 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_03002 4a529e889d6cc30abcdcc8faaec9a11a 326 Gene3D G3DSA:1.10.3470.10 11 325 1.5E-59 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_02721 a78251010f24d0573c765928c742ceb2 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 1.7E-68 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_02721 a78251010f24d0573c765928c742ceb2 212 SUPERFAMILY SSF55068 3 206 1.7E-79 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_02721 a78251010f24d0573c765928c742ceb2 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.749 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_02721 a78251010f24d0573c765928c742ceb2 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 1.3E-69 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_02721 a78251010f24d0573c765928c742ceb2 212 Gene3D G3DSA:3.30.1060.10 3 211 2.0E-90 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_01295 1cf7f8addb6bb459a46242faebeb8692 155 Pfam PF00174 Oxidoreductase molybdopterin binding domain 53 121 4.2E-5 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VAA_01295 1cf7f8addb6bb459a46242faebeb8692 155 SUPERFAMILY SSF56524 21 150 1.31E-13 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 Gene3D G3DSA:3.40.50.150 158 346 3.7E-40 T 13-10-2018 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 Pfam PF05175 Methyltransferase small domain 172 336 6.0E-57 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.4E-58 T 13-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 45.456 T 13-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 Gene3D G3DSA:3.40.50.150 1 157 6.8E-52 T 13-10-2018 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_00783 e912899f98ab1c452b98ea28c8ea20d7 347 SUPERFAMILY SSF53335 159 339 5.91E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03116 8d8d8988974be539747b07b648866d29 237 SMART SM00448 25 138 2.9E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03116 8d8d8988974be539747b07b648866d29 237 Pfam PF00072 Response regulator receiver domain 27 139 3.2E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03116 8d8d8988974be539747b07b648866d29 237 ProSitePatterns PS00622 LuxR-type HTH domain signature. 186 213 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 SUPERFAMILY SSF46894 159 233 1.02E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 Gene3D G3DSA:3.40.50.12740 25 232 2.2E-59 T 13-10-2018 VAA_03116 8d8d8988974be539747b07b648866d29 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 172 226 4.1E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 SMART SM00421 169 226 1.1E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 1.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 1.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 1.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03116 8d8d8988974be539747b07b648866d29 237 SUPERFAMILY SSF52172 25 155 9.96E-35 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.4E-236 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 Pfam PF00682 HMGL-like 4 273 9.0E-102 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 Gene3D G3DSA:3.20.20.70 1 277 3.0E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 SUPERFAMILY SSF110921 393 498 2.09E-20 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 Gene3D G3DSA:1.10.238.260 280 393 3.1E-32 T 13-10-2018 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 SUPERFAMILY SSF51569 1 291 5.86E-101 T 13-10-2018 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 Gene3D G3DSA:3.30.160.270 394 500 6.1E-7 T 13-10-2018 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.151 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 SMART SM00917 369 499 9.3E-28 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_03801 1fa8843c36d663f7f8aae5c9be5bf9a0 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 9.9E-30 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VAA_01208 971d00d7bb6550334b3a0e65c52b301f 412 Gene3D G3DSA:1.10.443.10 215 387 5.1E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_01208 971d00d7bb6550334b3a0e65c52b301f 412 SUPERFAMILY SSF56349 106 386 7.65E-61 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_01208 971d00d7bb6550334b3a0e65c52b301f 412 Pfam PF00589 Phage integrase family 214 376 7.0E-27 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_01208 971d00d7bb6550334b3a0e65c52b301f 412 Gene3D G3DSA:3.30.160.390 6 95 4.1E-27 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAA_01208 971d00d7bb6550334b3a0e65c52b301f 412 Pfam PF13356 Arm DNA-binding domain 8 93 3.7E-17 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VAA_01208 971d00d7bb6550334b3a0e65c52b301f 412 Gene3D G3DSA:1.10.150.130 104 214 1.2E-29 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 SUPERFAMILY SSF52540 209 493 2.06E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 Gene3D G3DSA:3.40.50.300 258 464 1.9E-33 T 13-10-2018 VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 202 2.3E-40 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 Gene3D G3DSA:3.40.50.300 465 727 8.4E-47 T 13-10-2018 VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 SUPERFAMILY SSF52540 401 703 1.51E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 SMART SM00487 255 477 2.4E-8 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 5 717 2.1E-142 T 13-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 Gene3D G3DSA:3.90.1570.50 76 252 1.7E-24 T 13-10-2018 VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 Pfam PF11867 Domain of unknown function (DUF3387) 718 1052 1.1E-99 T 13-10-2018 IPR021810 Protein of unknown function DUF3387 VAA_01701 3d4169eec26993327ab907dc0301d27c 1260 Pfam PF04851 Type III restriction enzyme, res subunit 258 450 1.3E-14 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 SUPERFAMILY SSF47384 196 276 6.47E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 Gene3D G3DSA:3.30.565.10 283 431 7.8E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 429 7.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 SMART SM00304 159 211 3.1E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 SUPERFAMILY SSF55874 266 430 1.44E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 Pfam PF00672 HAMP domain 161 206 1.2E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 2.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 SMART SM00388 212 277 1.9E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 SMART SM00387 320 432 2.1E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 Gene3D G3DSA:1.10.287.130 163 278 5.2E-22 T 13-10-2018 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 SUPERFAMILY SSF158472 159 207 3.01E-6 T 13-10-2018 VAA_02048 7f75bcb75af24bf32cd4a2d507f56c1f 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 275 5.7E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 SUPERFAMILY SSF81336 99 268 6.02E-50 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 269 3.5E-45 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 PRINTS PR00123 ATP synthase A subunit signature 254 269 3.8E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 PRINTS PR00123 ATP synthase A subunit signature 107 123 3.8E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 PRINTS PR00123 ATP synthase A subunit signature 206 228 3.8E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.517 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 Gene3D G3DSA:1.20.120.220 98 274 2.2E-66 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00831 f5bcf36667b912568ba8c005e2b8aaad 276 Pfam PF00119 ATP synthase A chain 50 268 9.7E-58 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_03283 29e46ba177004bcf960013d051728841 188 Gene3D G3DSA:3.10.450.50 22 188 1.0E-19 T 13-10-2018 VAA_03283 29e46ba177004bcf960013d051728841 188 PIRSF PIRSF028288 1 188 3.9E-89 T 13-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 VAA_01598 bb3190e1d2456fb48ebdfe6b888671aa 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VAA_01598 bb3190e1d2456fb48ebdfe6b888671aa 155 PIRSF PIRSF000368 1 155 6.2E-59 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VAA_01598 bb3190e1d2456fb48ebdfe6b888671aa 155 SUPERFAMILY SSF102114 23 113 1.29E-6 T 13-10-2018 VAA_01598 bb3190e1d2456fb48ebdfe6b888671aa 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 9.3E-62 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VAA_01598 bb3190e1d2456fb48ebdfe6b888671aa 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.2E-52 T 13-10-2018 VAA_01598 bb3190e1d2456fb48ebdfe6b888671aa 155 Gene3D G3DSA:3.20.20.70 2 155 7.9E-25 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01305 81b2b0dd40c762cbb3026891ca20ed60 219 SMART SM00702 30 206 2.9E-29 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VAA_01305 81b2b0dd40c762cbb3026891ca20ed60 219 Gene3D G3DSA:2.60.120.620 19 208 4.5E-48 T 13-10-2018 VAA_01305 81b2b0dd40c762cbb3026891ca20ed60 219 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 116 206 8.7E-18 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VAA_01612 1f4e3d6d496801f77da00d6ff58893ea 594 SMART SM00283 320 588 2.0E-53 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01612 1f4e3d6d496801f77da00d6ff58893ea 594 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 375 555 1.9E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01612 1f4e3d6d496801f77da00d6ff58893ea 594 Gene3D G3DSA:1.10.287.950 258 590 5.9E-62 T 13-10-2018 VAA_01612 1f4e3d6d496801f77da00d6ff58893ea 594 SUPERFAMILY SSF58104 280 589 3.49E-66 T 13-10-2018 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 Gene3D G3DSA:3.30.70.580 70 228 4.2E-48 T 13-10-2018 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 Gene3D G3DSA:3.10.290.10 1 60 8.6E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 Pfam PF00849 RNA pseudouridylate synthase 68 185 6.6E-17 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 Pfam PF01479 S4 domain 4 38 6.2E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 2.3E-54 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 SMART SM00363 3 73 1.9E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 SUPERFAMILY SSF55174 4 96 3.53E-12 T 13-10-2018 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 SUPERFAMILY SSF55120 68 236 1.52E-41 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02242 2bf1a171eeebb2bcb4999bb47b176696 347 Gene3D G3DSA:3.30.70.1560 130 220 4.2E-48 T 13-10-2018 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 165 253 6.3E-15 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 SUPERFAMILY SSF55804 1 146 1.07E-38 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 SUPERFAMILY SSF52794 162 257 4.71E-34 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 Gene3D G3DSA:3.40.930.10 1 152 9.4E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 617 4.6E-87 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 Pfam PF02378 Phosphotransferase system, EIIC 289 565 1.5E-15 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 Gene3D G3DSA:3.40.50.2300 153 261 7.3E-39 T 13-10-2018 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 163 245 1.3E-30 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.8E-39 T 13-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VAA_02034 6e8f06417cfd65df0dd8351e20609e17 632 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 2.5E-35 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SUPERFAMILY SSF55874 843 1002 1.15E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SUPERFAMILY SSF52172 1025 1143 5.98E-19 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SUPERFAMILY SSF47384 773 854 1.31E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 7.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 7.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 7.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 7.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 9.9E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SMART SM00388 788 853 1.4E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Pfam PF12860 PAS fold 634 748 1.6E-43 T 13-10-2018 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Gene3D G3DSA:3.30.565.10 852 1006 2.8E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1002 1.4E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SMART SM00448 1027 1140 7.5E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Gene3D G3DSA:3.40.50.2300 1023 1144 2.0E-17 T 13-10-2018 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Pfam PF00072 Response regulator receiver domain 1029 1140 7.3E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Gene3D G3DSA:1.10.287.130 747 851 1.8E-13 T 13-10-2018 VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SMART SM00387 897 1006 4.8E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 SUPERFAMILY SSF55785 626 741 2.3E-8 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02551 7d4cf6863956a0486e3d09ce43a5b6ae 1144 Gene3D G3DSA:3.30.450.20 616 746 1.1E-11 T 13-10-2018 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 Hamap MF_00268 Protein RecA [recA]. 9 333 50.198 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 Gene3D G3DSA:3.40.50.300 30 271 4.5E-82 T 13-10-2018 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 Gene3D G3DSA:3.30.250.10 272 330 6.0E-24 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 Pfam PF00154 recA bacterial DNA recombination protein 11 271 2.7E-142 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 ProSitePatterns PS00321 recA signature. 217 225 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 SMART SM00382 61 232 2.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 8 328 2.5E-168 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 PRINTS PR00142 RecA protein signature 247 276 1.4E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 PRINTS PR00142 RecA protein signature 97 126 1.4E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 PRINTS PR00142 RecA protein signature 169 198 1.4E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 PRINTS PR00142 RecA protein signature 214 242 1.4E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 PRINTS PR00142 RecA protein signature 301 318 1.4E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 PRINTS PR00142 RecA protein signature 131 160 1.4E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 SUPERFAMILY SSF52540 8 270 3.47E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00704 0a74321b305a01ded2610c46d9b336dc 352 SUPERFAMILY SSF54752 273 329 1.26E-19 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Gene3D G3DSA:3.30.1370.100 519 612 4.5E-54 T 13-10-2018 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 SMART SM01340 214 332 1.2E-58 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Pfam PF08676 MutL C terminal dimerisation domain 475 617 3.5E-28 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 SUPERFAMILY SSF54211 193 332 1.52E-37 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 331 7.2E-40 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Gene3D G3DSA:2.30.42.20 475 657 4.5E-54 T 13-10-2018 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 658 25.298 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 SUPERFAMILY SSF118116 475 657 3.79E-37 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 312 1.3E-101 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Gene3D G3DSA:3.30.230.10 219 331 4.3E-40 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 SUPERFAMILY SSF55874 2 205 4.71E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 121 1.7E-11 T 13-10-2018 VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 Gene3D G3DSA:3.30.565.10 3 218 2.8E-69 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00116 52d3cceeeee7465db9c661b8c972dedd 660 SMART SM00853 478 619 5.3E-13 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 Gene3D G3DSA:1.10.10.10 119 227 1.7E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 SMART SM00862 148 224 5.1E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 SUPERFAMILY SSF46894 124 225 1.28E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 SUPERFAMILY SSF52172 1 123 1.2E-39 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 3.8E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 Gene3D G3DSA:3.40.50.2300 1 118 1.6E-36 T 13-10-2018 VAA_02573 a30e1397b14ca1affb5c0106f0309212 228 SMART SM00448 2 111 1.3E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01948 6163a7634539337885f22663ba8757c8 393 Pfam PF07719 Tetratricopeptide repeat 327 356 4.1E-5 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 VAA_01948 6163a7634539337885f22663ba8757c8 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 9.6E-114 T 13-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VAA_01948 6163a7634539337885f22663ba8757c8 393 Pfam PF07219 HemY protein N-terminus 26 132 3.6E-26 T 13-10-2018 IPR010817 HemY, N-terminal VAA_01948 6163a7634539337885f22663ba8757c8 393 Gene3D G3DSA:1.25.40.10 61 392 8.4E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01948 6163a7634539337885f22663ba8757c8 393 SUPERFAMILY SSF48452 311 389 2.02E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01948 6163a7634539337885f22663ba8757c8 393 SUPERFAMILY SSF48452 84 233 5.48E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 SMART SM00760 379 448 3.4E-45 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 469 3.3E-187 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Gene3D G3DSA:1.10.8.60 302 372 1.6E-24 T 13-10-2018 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 SUPERFAMILY SSF52540 136 347 9.14E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 SMART SM00382 168 381 3.3E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Pfam PF00308 Bacterial dnaA protein 137 353 1.8E-97 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Pfam PF11638 DnaA N-terminal domain 8 69 2.4E-19 T 13-10-2018 IPR024633 DnaA N-terminal domain VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 ProSitePatterns PS01008 DnaA protein signature. 429 448 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 SUPERFAMILY SSF48295 367 470 6.8E-38 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Gene3D G3DSA:3.40.50.300 122 300 3.7E-49 T 13-10-2018 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 201 215 1.9E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 169 189 1.9E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 233 247 1.9E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 429 448 1.9E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 267 294 1.9E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 470 34.419 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 380 448 1.8E-32 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Gene3D G3DSA:1.10.1750.10 378 471 2.9E-39 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VAA_00846 fd52195c20283c13eaadb6b6b7426a17 471 Gene3D G3DSA:3.30.300.180 6 118 5.0E-41 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily VAA_03111 1cbdd88cb7909e715c1d80f476f583fc 205 SUPERFAMILY SSF56935 28 193 4.58E-6 T 13-10-2018 VAA_03111 1cbdd88cb7909e715c1d80f476f583fc 205 Pfam PF16966 Porin-like glycoporin RafY 1 205 5.6E-31 T 13-10-2018 IPR016963 Glycoporin RafY VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 Gene3D G3DSA:3.40.50.720 266 562 1.0E-109 T 13-10-2018 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 SUPERFAMILY SSF51735 268 559 1.4E-95 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.407 T 13-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 SUPERFAMILY SSF53223 4 267 1.51E-109 T 13-10-2018 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PIRSF PIRSF000106 2 560 1.1E-225 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 SMART SM01274 78 258 6.2E-108 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 8.8E-104 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 Gene3D G3DSA:3.40.50.10380 13 265 5.4E-114 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 SMART SM00919 268 528 3.5E-134 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 144 173 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 264 280 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 295 311 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 180 202 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 239 257 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 405 421 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 PRINTS PR00072 Malic enzyme signature 84 108 1.9E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02226 4000e80bcbd8926449bbc15ab15f7cae 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 5.3E-78 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAA_00641 637709c0709f3dcb41a724678d4b253f 181 SUPERFAMILY SSF55811 8 178 1.62E-38 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_00641 637709c0709f3dcb41a724678d4b253f 181 Gene3D G3DSA:3.90.79.10 7 181 4.9E-47 T 13-10-2018 VAA_00641 637709c0709f3dcb41a724678d4b253f 181 Pfam PF00293 NUDIX domain 47 155 1.5E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_00641 637709c0709f3dcb41a724678d4b253f 181 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_01875 531b6ac1aebc48bb01e90feac4e0a463 419 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 15 405 2.3E-107 T 13-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VAA_01875 531b6ac1aebc48bb01e90feac4e0a463 419 Pfam PF04403 Paraquat-inducible protein A 59 208 3.9E-36 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like VAA_01875 531b6ac1aebc48bb01e90feac4e0a463 419 Pfam PF04403 Paraquat-inducible protein A 251 407 2.7E-47 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 Gene3D G3DSA:3.90.180.10 10 310 4.8E-94 T 13-10-2018 VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 2.4E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 4.4E-21 T 13-10-2018 VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 Gene3D G3DSA:3.40.50.720 133 263 4.8E-94 T 13-10-2018 VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 SUPERFAMILY SSF50129 4 154 6.7E-36 T 13-10-2018 IPR011032 GroES-like superfamily VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 SMART SM00829 12 312 4.7E-14 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAA_00712 08c2bf0489423ddb43e47c92d1f22132 316 SUPERFAMILY SSF51735 122 246 6.93E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 SUPERFAMILY SSF48452 39 225 4.07E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 SMART SM00267 358 526 4.4E-33 T 13-10-2018 IPR000160 GGDEF domain VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 Gene3D G3DSA:1.25.40.10 20 267 1.1E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 2.1E-33 T 13-10-2018 IPR000160 GGDEF domain VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 7.8E-33 T 13-10-2018 IPR000160 GGDEF domain VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 Gene3D G3DSA:3.30.70.270 356 525 2.8E-42 T 13-10-2018 VAA_02910 1fa0c41399df35cf1bea473d9dd51d5e 526 SUPERFAMILY SSF55073 374 524 6.83E-36 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 145 159 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 SUPERFAMILY SSF55174 22 74 7.21E-9 T 13-10-2018 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 Pfam PF00849 RNA pseudouridylate synthase 106 251 4.8E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 Gene3D G3DSA:3.30.2350.10 98 318 1.6E-77 T 13-10-2018 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 SUPERFAMILY SSF55120 100 312 1.23E-62 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 316 6.1E-91 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 Gene3D G3DSA:3.10.290.10 10 77 3.5E-16 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 Pfam PF01479 S4 domain 23 69 1.3E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_03350 d3f0a0ef615b7ba9be879d46e84aad62 318 SMART SM00363 23 80 2.8E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 Pfam PF03466 LysR substrate binding domain 94 301 2.4E-38 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 Gene3D G3DSA:1.10.10.10 9 95 3.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.2E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 Gene3D G3DSA:3.40.190.10 98 298 5.0E-57 T 13-10-2018 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 SUPERFAMILY SSF53850 95 301 5.07E-38 T 13-10-2018 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 SUPERFAMILY SSF46785 11 89 4.0E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 Gene3D G3DSA:3.40.190.10 169 270 5.0E-57 T 13-10-2018 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00937 e79bb94d61af007feb975c5466c29c1a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03119 bcefffae354ba50029f99dec24532968 188 SUPERFAMILY SSF50104 1 65 7.82E-10 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAA_03119 bcefffae354ba50029f99dec24532968 188 SUPERFAMILY SSF50249 67 129 1.63E-10 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03119 bcefffae354ba50029f99dec24532968 188 SMART SM00841 132 187 3.8E-28 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAA_03119 bcefffae354ba50029f99dec24532968 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 1.7E-94 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP VAA_03119 bcefffae354ba50029f99dec24532968 188 SUPERFAMILY SSF50249 132 188 2.4E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03119 bcefffae354ba50029f99dec24532968 188 PIRSF PIRSF005901 1 188 3.4E-59 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP VAA_03119 bcefffae354ba50029f99dec24532968 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VAA_03119 bcefffae354ba50029f99dec24532968 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 4.0E-13 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAA_03119 bcefffae354ba50029f99dec24532968 188 Gene3D G3DSA:2.30.30.30 1 64 1.3E-11 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAA_03119 bcefffae354ba50029f99dec24532968 188 Gene3D G3DSA:2.40.50.140 131 188 3.1E-21 T 13-10-2018 VAA_03119 bcefffae354ba50029f99dec24532968 188 Gene3D G3DSA:2.40.50.140 67 130 1.4E-14 T 13-10-2018 VAA_03119 bcefffae354ba50029f99dec24532968 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 9.3E-21 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAA_03119 bcefffae354ba50029f99dec24532968 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 3.6E-14 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like VAA_03119 bcefffae354ba50029f99dec24532968 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.765 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP VAA_03119 bcefffae354ba50029f99dec24532968 188 SMART SM01185 69 124 3.0E-14 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAA_00997 24b06df14b970f78f91169820397f8f6 976 SUPERFAMILY SSF53383 467 969 6.12E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00997 24b06df14b970f78f91169820397f8f6 976 Gene3D G3DSA:3.90.1150.10 782 918 3.2E-42 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_00997 24b06df14b970f78f91169820397f8f6 976 Gene3D G3DSA:3.40.640.10 117 375 4.7E-104 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00997 24b06df14b970f78f91169820397f8f6 976 Gene3D G3DSA:3.40.640.10 544 770 1.6E-58 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00997 24b06df14b970f78f91169820397f8f6 976 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 39 968 0.0 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAA_00997 24b06df14b970f78f91169820397f8f6 976 SUPERFAMILY SSF53383 39 460 3.2E-98 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00997 24b06df14b970f78f91169820397f8f6 976 Pfam PF02347 Glycine cleavage system P-protein 480 758 2.2E-8 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAA_00997 24b06df14b970f78f91169820397f8f6 976 Pfam PF02347 Glycine cleavage system P-protein 39 460 2.3E-178 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAA_00997 24b06df14b970f78f91169820397f8f6 976 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 30 974 25.563 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 Gene3D G3DSA:3.80.30.20 7 368 2.4E-135 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 SUPERFAMILY SSF102114 11 449 1.11E-143 T 13-10-2018 VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 Gene3D G3DSA:1.10.10.920 369 462 4.2E-34 T 13-10-2018 VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 Pfam PF04055 Radical SAM superfamily 62 231 6.3E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 SMART SM00729 57 277 2.9E-53 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 Pfam PF06969 HemN C-terminal domain 368 436 7.9E-12 T 13-10-2018 IPR010723 HemN, C-terminal VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 1.7E-207 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VAA_00584 d744e4d3fb1b162c69d77d684066e023 462 PIRSF PIRSF000167 8 459 2.5E-171 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VAA_03258 a2e759daee113848c054f4f9ec9a1255 263 Pfam PF01553 Acyltransferase 79 198 1.7E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_03258 a2e759daee113848c054f4f9ec9a1255 263 SMART SM00563 92 202 3.6E-11 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_03258 a2e759daee113848c054f4f9ec9a1255 263 SUPERFAMILY SSF69593 71 256 6.15E-24 T 13-10-2018 VAA_02657 fecb875b0dea22ec813ace7c4b2fadda 201 Pfam PF02525 Flavodoxin-like fold 19 183 1.8E-44 T 13-10-2018 IPR003680 Flavodoxin-like fold VAA_02657 fecb875b0dea22ec813ace7c4b2fadda 201 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 14 198 48.545 T 13-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VAA_02657 fecb875b0dea22ec813ace7c4b2fadda 201 Gene3D G3DSA:3.40.50.360 18 193 2.0E-54 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_02657 fecb875b0dea22ec813ace7c4b2fadda 201 SUPERFAMILY SSF52218 18 189 2.19E-48 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_02871 71ddb5ffe183b7374de15b8e8deca589 625 Pfam PF05787 Bacterial protein of unknown function (DUF839) 56 592 2.1E-202 T 13-10-2018 IPR008557 Protein of unknown function DUF839 VAA_02871 71ddb5ffe183b7374de15b8e8deca589 625 SUPERFAMILY SSF63829 287 592 8.83E-17 T 13-10-2018 VAA_02871 71ddb5ffe183b7374de15b8e8deca589 625 Gene3D G3DSA:2.120.10.30 449 612 1.6E-5 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 Gene3D G3DSA:3.90.780.10 368 576 2.2E-38 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 SUPERFAMILY SSF56300 11 321 1.18E-70 T 13-10-2018 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 SUPERFAMILY SSF55816 369 566 4.45E-42 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 Gene3D G3DSA:3.60.21.10 2 367 8.1E-86 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 Pfam PF00149 Calcineurin-like phosphoesterase 13 250 1.7E-7 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 Pfam PF02872 5'-nucleotidase, C-terminal domain 382 537 1.6E-22 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 PRINTS PR01607 Apyrase family signature 214 231 6.8E-15 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 PRINTS PR01607 Apyrase family signature 233 256 6.8E-15 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 PRINTS PR01607 Apyrase family signature 9 27 6.8E-15 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 PRINTS PR01607 Apyrase family signature 513 532 6.8E-15 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_01644 4296b38ef7a36fbc91b03fc4e48dac3b 579 PRINTS PR01607 Apyrase family signature 273 293 6.8E-15 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 26 36 2.8E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 36 46 2.8E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 Pfam PF13377 Periplasmic binding protein-like domain 191 352 3.2E-36 T 13-10-2018 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 Gene3D G3DSA:3.40.50.2300 85 344 5.3E-74 T 13-10-2018 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 26 71 1.9E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 SMART SM00354 24 94 1.6E-33 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 SUPERFAMILY SSF47413 23 82 2.81E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 Gene3D G3DSA:1.10.260.40 24 82 5.7E-21 T 13-10-2018 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 Gene3D G3DSA:3.40.50.2300 183 349 5.3E-74 T 13-10-2018 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 27 45 - T 13-10-2018 VAA_03648 4585e88c0ca2643f2c7e6def047ecfe4 355 SUPERFAMILY SSF53822 84 353 3.14E-83 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 380 616 2.0E-120 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 PRINTS PR00046 Major sigma-70 factor signature 432 440 3.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 PRINTS PR00046 Major sigma-70 factor signature 556 568 3.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 PRINTS PR00046 Major sigma-70 factor signature 592 603 3.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 PRINTS PR00046 Major sigma-70 factor signature 577 592 3.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 PRINTS PR00046 Major sigma-70 factor signature 408 421 3.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.4E-28 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Pfam PF04545 Sigma-70, region 4 552 605 1.8E-19 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Pfam PF04542 Sigma-70 region 2 384 453 1.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Pfam PF04546 Sigma-70, non-essential region 139 353 2.4E-65 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Gene3D G3DSA:1.10.10.10 457 533 2.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 13-10-2018 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Pfam PF04539 Sigma-70 region 3 463 538 1.3E-28 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 577 603 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 617 46.034 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Gene3D G3DSA:1.10.10.10 534 618 2.1E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Gene3D G3DSA:1.10.601.10 113 453 4.3E-138 T 13-10-2018 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 SUPERFAMILY SSF88659 457 530 2.22E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 SUPERFAMILY SSF88659 514 616 8.5E-26 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 408 421 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 380 605 7.4E-38 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_00677 06ea79c20f261bdbf0a116b0baf41d9b 618 SUPERFAMILY SSF88946 115 451 3.79E-96 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SMART SM00089 62 144 0.076 T 13-10-2018 IPR022409 PKD/Chitinase domain VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SMART SM00089 615 701 3.4E-5 T 13-10-2018 IPR022409 PKD/Chitinase domain VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SMART SM00089 713 797 0.45 T 13-10-2018 IPR022409 PKD/Chitinase domain VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Gene3D G3DSA:2.10.10.20 806 849 7.2E-15 T 13-10-2018 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Gene3D G3DSA:3.20.20.80 172 587 5.5E-173 T 13-10-2018 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SUPERFAMILY SSF51445 145 598 2.68E-89 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Gene3D G3DSA:2.60.40.10 32 142 2.2E-43 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Gene3D G3DSA:2.60.40.10 608 705 1.3E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SUPERFAMILY SSF49299 607 700 1.77E-7 T 13-10-2018 IPR035986 PKD domain superfamily VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Gene3D G3DSA:2.60.40.10 706 795 1.7E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Pfam PF00704 Glycosyl hydrolases family 18 171 585 4.3E-89 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Pfam PF08329 Chitinase A, N-terminal domain 30 166 8.2E-54 T 13-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 ProSitePatterns PS01095 Chitinases family 18 active site. 317 325 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 Gene3D G3DSA:3.10.50.10 476 561 5.5E-173 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SUPERFAMILY SSF81296 31 143 4.76E-33 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SMART SM00495 806 851 1.1E-9 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SUPERFAMILY SSF51055 805 852 1.41E-12 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SMART SM00636 169 585 2.2E-159 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SUPERFAMILY SSF54556 471 556 4.0E-16 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VAA_02862 9f8da090581b5d61c1fd99c020b8b244 859 SUPERFAMILY SSF49299 707 794 7.06E-6 T 13-10-2018 IPR035986 PKD domain superfamily VAA_03055 3a20691a766ddf585a2bada82e0da0c3 259 Gene3D G3DSA:3.40.190.10 117 213 4.6E-24 T 13-10-2018 VAA_03055 3a20691a766ddf585a2bada82e0da0c3 259 Gene3D G3DSA:3.40.190.10 37 257 4.6E-24 T 13-10-2018 VAA_03055 3a20691a766ddf585a2bada82e0da0c3 259 SMART SM00062 31 257 0.002 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03055 3a20691a766ddf585a2bada82e0da0c3 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 241 1.7E-20 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03055 3a20691a766ddf585a2bada82e0da0c3 259 SUPERFAMILY SSF53850 29 258 3.37E-32 T 13-10-2018 VAA_01703 076a705e1497a3f425d7cedc2d79f1e2 342 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 328 1.8E-59 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 SUPERFAMILY SSF53955 493 649 6.29E-46 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 Pfam PF01464 Transglycosylase SLT domain 498 610 7.4E-29 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 Gene3D G3DSA:1.10.530.10 487 657 2.9E-49 T 13-10-2018 VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 Gene3D G3DSA:1.10.1240.20 419 485 7.1E-20 T 13-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 SUPERFAMILY SSF48435 42 490 1.83E-119 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 Gene3D G3DSA:1.25.20.10 41 402 6.1E-99 T 13-10-2018 VAA_00428 8e7a6f8c0bc19e3d0625a675362e0225 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 420 485 1.7E-22 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VAA_01394 444d7834b8403a07e00a3f9007e355fa 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 17 215 37.34 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAA_01394 444d7834b8403a07e00a3f9007e355fa 215 Gene3D G3DSA:3.40.50.10990 22 192 4.7E-62 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAA_01394 444d7834b8403a07e00a3f9007e355fa 215 SUPERFAMILY SSF142695 34 189 1.83E-52 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAA_01394 444d7834b8403a07e00a3f9007e355fa 215 Pfam PF00925 GTP cyclohydrolase II 36 188 1.7E-57 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VAA_03104 890ea0256420a1827647c1d4c72e4d08 215 SUPERFAMILY SSF53335 3 214 6.44E-54 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03104 890ea0256420a1827647c1d4c72e4d08 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 215 1.5E-75 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VAA_03104 890ea0256420a1827647c1d4c72e4d08 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.0E-79 T 13-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VAA_03104 890ea0256420a1827647c1d4c72e4d08 215 Gene3D G3DSA:3.40.50.150 1 215 2.7E-60 T 13-10-2018 VAA_03104 890ea0256420a1827647c1d4c72e4d08 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.347 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VAA_03104 890ea0256420a1827647c1d4c72e4d08 215 PIRSF PIRSF023956 1 215 1.9E-74 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 Gene3D G3DSA:1.10.10.60 426 483 7.9E-24 T 13-10-2018 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 Pfam PF04963 Sigma-54 factor, core binding domain 125 314 5.9E-60 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 7.8E-73 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 9.7E-156 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 PIRSF PIRSF000774 1 486 2.5E-153 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 PRINTS PR00045 Sigma-54 factor signature 459 477 3.4E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 PRINTS PR00045 Sigma-54 factor signature 385 397 3.4E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 PRINTS PR00045 Sigma-54 factor signature 401 412 3.4E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 PRINTS PR00045 Sigma-54 factor signature 197 214 3.4E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 Gene3D G3DSA:1.10.10.1330 127 238 2.0E-21 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 4.0E-17 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02739 d6050924a0bd69c700ccae845923fd6b 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 Pfam PF00501 AMP-binding enzyme 66 501 2.3E-83 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 SUPERFAMILY SSF56801 4 622 2.22E-155 T 13-10-2018 VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.7E-26 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 8.3E-13 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 Gene3D G3DSA:3.40.50.12780 30 494 1.3E-104 T 13-10-2018 VAA_02062 050295a6e90c5f33b14f2eaf74c5a084 625 Gene3D G3DSA:3.30.300.30 497 624 3.5E-25 T 13-10-2018 VAA_02571 0ba599e95a6beef53e677f64ff5242e6 158 Pfam PF00588 SpoU rRNA Methylase family 3 145 3.5E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAA_02571 0ba599e95a6beef53e677f64ff5242e6 158 SUPERFAMILY SSF75217 2 156 6.47E-43 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_02571 0ba599e95a6beef53e677f64ff5242e6 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 1.3E-57 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VAA_02571 0ba599e95a6beef53e677f64ff5242e6 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 32.525 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VAA_02571 0ba599e95a6beef53e677f64ff5242e6 158 PIRSF PIRSF029256 1 158 3.4E-66 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VAA_02571 0ba599e95a6beef53e677f64ff5242e6 158 Gene3D G3DSA:3.40.1280.10 1 158 1.8E-63 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 291 2.5E-22 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 5 362 45.577 T 13-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 SUPERFAMILY SSF51735 97 261 1.29E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Pfam PF11890 Domain of unknown function (DUF3410) 294 374 6.8E-28 T 13-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 SUPERFAMILY SSF52283 8 106 3.61E-22 T 13-10-2018 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Gene3D G3DSA:3.30.1370.170 298 385 1.2E-31 T 13-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 261 7.5E-33 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Gene3D G3DSA:3.40.50.720 97 262 4.5E-113 T 13-10-2018 VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 202 218 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_03431 bf5f6da85a53775f88bf028ae654bb8b 385 Gene3D G3DSA:3.40.50.720 5 282 4.5E-113 T 13-10-2018 VAA_00845 2d2ac6ae56fec018343d22796512a82f 296 Gene3D G3DSA:3.40.190.10 153 252 4.2E-59 T 13-10-2018 VAA_00845 2d2ac6ae56fec018343d22796512a82f 296 SUPERFAMILY SSF53850 48 293 4.84E-55 T 13-10-2018 VAA_00845 2d2ac6ae56fec018343d22796512a82f 296 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 93 106 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site VAA_00845 2d2ac6ae56fec018343d22796512a82f 296 SMART SM00062 71 292 1.1E-72 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_00845 2d2ac6ae56fec018343d22796512a82f 296 Gene3D G3DSA:3.40.190.10 76 289 4.2E-59 T 13-10-2018 VAA_00845 2d2ac6ae56fec018343d22796512a82f 296 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 72 290 5.2E-54 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01398 83427e0c2b6d04d0cd52cb020eedf224 369 SUPERFAMILY SSF75011 54 187 5.75E-13 T 13-10-2018 VAA_01398 83427e0c2b6d04d0cd52cb020eedf224 369 Gene3D G3DSA:2.130.10.10 29 192 4.1E-6 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_01398 83427e0c2b6d04d0cd52cb020eedf224 369 Pfam PF07433 Protein of unknown function (DUF1513) 69 361 7.2E-111 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VAA_01398 83427e0c2b6d04d0cd52cb020eedf224 369 PIRSF PIRSF028101 4 363 4.3E-153 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VAA_02039 5195721cbdac1d5b360d3d4430320481 98 Pfam PF02001 Protein of unknown function DUF134 9 95 1.6E-17 T 13-10-2018 IPR002852 Uncharacterised protein family UPF0251 VAA_02039 5195721cbdac1d5b360d3d4430320481 98 SUPERFAMILY SSF88659 40 88 2.62E-5 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_02039 5195721cbdac1d5b360d3d4430320481 98 Hamap MF_00674 UPF0251 protein . 8 98 20.323 T 13-10-2018 IPR002852 Uncharacterised protein family UPF0251 VAA_02039 5195721cbdac1d5b360d3d4430320481 98 Gene3D G3DSA:1.10.10.10 33 89 1.1E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Gene3D G3DSA:1.10.530.10 107 259 1.3E-28 T 13-10-2018 VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 130 158 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SUPERFAMILY SSF53955 109 260 9.0E-40 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Gene3D G3DSA:3.10.350.10 337 390 1.6E-14 T 13-10-2018 IPR036779 LysM domain superfamily VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Gene3D G3DSA:3.10.350.10 411 464 6.4E-17 T 13-10-2018 IPR036779 LysM domain superfamily VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Gene3D G3DSA:3.10.350.10 465 522 9.0E-14 T 13-10-2018 IPR036779 LysM domain superfamily VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Pfam PF01464 Transglycosylase SLT domain 124 223 1.8E-21 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SUPERFAMILY SSF54106 339 383 2.35E-11 T 13-10-2018 VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SMART SM00257 414 458 2.5E-14 T 13-10-2018 IPR018392 LysM domain VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SMART SM00257 471 515 2.1E-11 T 13-10-2018 IPR018392 LysM domain VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SMART SM00257 340 383 2.1E-13 T 13-10-2018 IPR018392 LysM domain VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SUPERFAMILY SSF54106 470 515 5.36E-10 T 13-10-2018 VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Pfam PF01476 LysM domain 415 458 3.4E-13 T 13-10-2018 IPR018392 LysM domain VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Pfam PF01476 LysM domain 472 514 7.0E-13 T 13-10-2018 IPR018392 LysM domain VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 Pfam PF01476 LysM domain 341 383 7.8E-11 T 13-10-2018 IPR018392 LysM domain VAA_03554 a93e4bd9c9d0ba0fceaaf56e828107f5 523 SUPERFAMILY SSF54106 414 458 1.26E-11 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 SUPERFAMILY SSF50447 454 551 4.24E-17 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Gene3D G3DSA:3.10.310.40 748 857 5.1E-32 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 6.0E-18 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 SUPERFAMILY SSF55681 3 254 7.21E-108 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Pfam PF02272 DHHA1 domain 718 856 4.3E-29 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 SUPERFAMILY SSF55186 551 711 8.11E-52 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Gene3D G3DSA:2.40.30.130 460 550 4.4E-9 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Gene3D G3DSA:3.30.980.10 562 696 9.1E-52 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 SUPERFAMILY SSF101353 255 461 2.62E-59 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 SMART SM00863 652 695 2.3E-21 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Gene3D G3DSA:3.30.930.10 2 251 3.5E-118 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 3.4E-223 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Gene3D G3DSA:3.30.54.20 623 676 9.1E-52 T 13-10-2018 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.283 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VAA_00706 4cd633177e5c30c8b32b7308d0eff5b8 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 PRINTS PR00050 Cold shock protein signature 7 22 8.8E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 PRINTS PR00050 Cold shock protein signature 28 37 8.8E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 PRINTS PR00050 Cold shock protein signature 43 61 8.8E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 4.7E-30 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 SMART SM00357 6 70 1.6E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 Gene3D G3DSA:2.40.50.140 2 69 6.1E-29 T 13-10-2018 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 PIRSF PIRSF002599 1 70 7.8E-25 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAA_01445 91ef8e48369e89cb6550fdab0bad6c08 70 SUPERFAMILY SSF50249 4 68 4.07E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 Gene3D G3DSA:3.40.309.10 222 421 1.5E-142 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 PIRSF PIRSF036492 2 469 1.6E-147 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 SUPERFAMILY SSF53720 12 466 1.31E-110 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 Pfam PF00171 Aldehyde dehydrogenase family 33 441 6.1E-86 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 Gene3D G3DSA:3.40.605.10 30 441 1.5E-142 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 246 257 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAA_01929 a43c3d053f262f8e848b48cb933b335e 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 218 225 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 Gene3D G3DSA:3.40.50.620 8 220 1.7E-61 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 223 7.7E-48 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 SUPERFAMILY SSF52402 26 212 5.44E-53 T 13-10-2018 VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 25 246 3.9E-89 T 13-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 247 38.595 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 37 247 3.6E-84 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VAA_00273 eca57ce5a2d226c3907ac8c86b2bb21c 250 PIRSF PIRSF000857 8 250 1.4E-54 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VAA_00735 f3d4f4aa78d4d21d26cec8fbce8e29c3 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VAA_00735 f3d4f4aa78d4d21d26cec8fbce8e29c3 172 Pfam PF00258 Flavodoxin 5 160 2.7E-26 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAA_00735 f3d4f4aa78d4d21d26cec8fbce8e29c3 172 PIRSF PIRSF038996 1 171 4.3E-57 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAA_00735 f3d4f4aa78d4d21d26cec8fbce8e29c3 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 5.0E-68 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAA_00735 f3d4f4aa78d4d21d26cec8fbce8e29c3 172 SUPERFAMILY SSF52218 1 165 3.67E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00735 f3d4f4aa78d4d21d26cec8fbce8e29c3 172 Gene3D G3DSA:3.40.50.360 1 172 3.4E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_02703 4763133f2a8108c8e9f74eebc3118391 145 Pfam PF04945 YHS domain 38 83 9.5E-9 T 13-10-2018 IPR007029 YHS domain VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 Pfam PF00682 HMGL-like 8 271 5.3E-57 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 588 2.0E-264 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 Pfam PF02436 Conserved carboxylase domain 294 494 9.5E-58 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 Gene3D G3DSA:3.20.20.70 1 466 1.3E-169 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 SUPERFAMILY SSF51230 519 593 4.84E-20 T 13-10-2018 IPR011053 Single hybrid motif VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 Pfam PF00364 Biotin-requiring enzyme 528 592 3.9E-16 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 SUPERFAMILY SSF89000 299 464 2.31E-51 T 13-10-2018 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 SUPERFAMILY SSF51569 1 302 7.33E-88 T 13-10-2018 VAA_00710 2d03e86de6c8135f7d81603065ab3ff8 594 Gene3D G3DSA:2.40.50.100 520 594 3.8E-22 T 13-10-2018 VAA_01561 bb820c32efa794145631018897ac85b8 487 SUPERFAMILY SSF51621 3 346 8.37E-88 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_01561 bb820c32efa794145631018897ac85b8 487 Gene3D G3DSA:3.40.1380.20 340 473 5.8E-143 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 475 7.9E-9 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 SUPERFAMILY SSF50800 70 167 8.2E-24 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAA_01561 bb820c32efa794145631018897ac85b8 487 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 478 1.7E-149 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 Gene3D G3DSA:2.40.33.10 70 170 5.8E-143 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 Gene3D G3DSA:3.20.20.60 3 339 5.8E-143 T 13-10-2018 VAA_01561 bb820c32efa794145631018897ac85b8 487 SUPERFAMILY SSF52935 327 479 4.4E-19 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 Pfam PF00224 Pyruvate kinase, barrel domain 3 344 1.7E-127 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 221 247 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 273 297 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 248 272 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 298 316 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 317 333 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_01561 bb820c32efa794145631018897ac85b8 487 PRINTS PR01050 Pyruvate kinase family signature 188 202 2.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_02041 7f2a4a77d0fc1886ef900a1f9329c8d5 161 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 89 4.0E-14 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VAA_02041 7f2a4a77d0fc1886ef900a1f9329c8d5 161 SUPERFAMILY SSF53146 2 91 1.26E-19 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VAA_02041 7f2a4a77d0fc1886ef900a1f9329c8d5 161 Gene3D G3DSA:3.30.420.130 1 96 1.0E-14 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VAA_03400 b8c8c35139b0b51d135181ec65d33680 75 SUPERFAMILY SSF50037 4 74 2.13E-17 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal VAA_03400 b8c8c35139b0b51d135181ec65d33680 75 Gene3D G3DSA:2.30.30.90 4 75 3.1E-21 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain VAA_03400 b8c8c35139b0b51d135181ec65d33680 75 SMART SM00899 1 74 3.4E-20 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VAA_03400 b8c8c35139b0b51d135181ec65d33680 75 Pfam PF04023 FeoA domain 1 74 6.3E-15 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VAA_01998 1d29cf60c50af74b051b10fe158a8a0c 402 SUPERFAMILY SSF103473 9 400 1.31E-65 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01998 1d29cf60c50af74b051b10fe158a8a0c 402 Pfam PF07690 Major Facilitator Superfamily 26 364 9.6E-51 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01998 1d29cf60c50af74b051b10fe158a8a0c 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 15 397 9.3E-117 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VAA_01998 1d29cf60c50af74b051b10fe158a8a0c 402 Gene3D G3DSA:1.20.1720.10 19 398 4.0E-103 T 13-10-2018 VAA_03244 8530bef04fbe490e22ac011558a6d883 319 SUPERFAMILY SSF52833 34 153 4.85E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03244 8530bef04fbe490e22ac011558a6d883 319 SUPERFAMILY SSF47616 170 314 1.23E-35 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAA_03244 8530bef04fbe490e22ac011558a6d883 319 Gene3D G3DSA:3.40.30.130 4 174 3.4E-64 T 13-10-2018 VAA_03244 8530bef04fbe490e22ac011558a6d883 319 Pfam PF13409 Glutathione S-transferase, N-terminal domain 59 149 2.0E-21 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAA_03244 8530bef04fbe490e22ac011558a6d883 319 Gene3D G3DSA:1.20.1050.10 175 318 4.7E-69 T 13-10-2018 VAA_03244 8530bef04fbe490e22ac011558a6d883 319 Pfam PF13410 Glutathione S-transferase, C-terminal domain 195 266 3.6E-12 T 13-10-2018 VAA_03244 8530bef04fbe490e22ac011558a6d883 319 PIRSF PIRSF015753 6 315 4.2E-134 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 SUPERFAMILY SSF47384 558 629 6.28E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 PIRSF PIRSF037119 2 782 0.0 T 13-10-2018 IPR017116 Signal transduction histidine kinase, PgtB VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 Pfam PF00512 His Kinase A (phospho-acceptor) domain 564 628 8.8E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 SUPERFAMILY SSF55874 621 780 9.3E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 Gene3D G3DSA:1.10.287.130 538 625 7.2E-19 T 13-10-2018 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 SMART SM00304 343 395 5.5E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 SMART SM00387 673 782 1.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 Gene3D G3DSA:3.30.565.10 633 782 9.2E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 674 781 2.8E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 SMART SM00388 562 630 1.3E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 727 4.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 779 4.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 741 4.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01565 1e27ab976da94de35463b40f8c6ec5a7 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 760 4.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 SUPERFAMILY SSF75005 105 413 2.98E-95 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 Gene3D G3DSA:2.115.10.20 87 428 2.6E-100 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 112 125 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 106 526 8.6E-138 T 13-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 112 412 3.7E-93 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 SUPERFAMILY SSF49899 413 539 2.06E-18 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 452 538 2.6E-14 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 Gene3D G3DSA:2.60.120.560 429 547 4.1E-17 T 13-10-2018 VAA_01379 23d18f5cc62a7f41cd8afdb341af0770 559 SMART SM00640 112 516 4.0E-125 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 5.2E-21 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Gene3D G3DSA:2.40.340.10 332 401 3.5E-142 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Gene3D G3DSA:2.170.190.11 53 145 3.5E-142 T 13-10-2018 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 5.9E-24 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 SUPERFAMILY SSF63882 9 180 3.01E-54 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 SUPERFAMILY SSF63867 332 409 2.49E-23 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Gene3D G3DSA:3.90.105.10 31 178 3.5E-142 T 13-10-2018 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 1.6E-31 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 SUPERFAMILY SSF53218 181 327 2.62E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.2E-44 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 SMART SM00852 184 321 3.3E-39 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VAA_01626 204530337bd2a1baf5a14a8c87c231b9 411 Gene3D G3DSA:3.40.980.10 179 331 3.5E-142 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 SUPERFAMILY SSF52540 164 550 1.16E-100 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 850 2.1E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Gene3D G3DSA:1.10.8.60 771 863 5.4E-26 T 13-10-2018 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 764 4.3E-57 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Gene3D G3DSA:3.40.50.300 353 549 2.7E-66 T 13-10-2018 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Gene3D G3DSA:3.40.50.300 163 352 1.3E-74 T 13-10-2018 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Gene3D G3DSA:1.10.1780.10 6 153 1.7E-32 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 99 150 4.1E-14 T 13-10-2018 IPR004176 Clp, N-terminal VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 73 7.0E-13 T 13-10-2018 IPR004176 Clp, N-terminal VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Gene3D G3DSA:3.40.50.300 555 769 4.4E-89 T 13-10-2018 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 299 311 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 SMART SM00382 203 348 8.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 SMART SM00382 602 768 3.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 SUPERFAMILY SSF81923 9 161 8.63E-42 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 636 654 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 SUPERFAMILY SSF52540 551 860 1.01E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 SMART SM01086 771 860 7.0E-35 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 11 859 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 339 2.9E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 713 727 4.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 606 624 4.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 4.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_00440 b57c4a3f1b2014ef162f6931039f3916 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 4.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_02287 382aeb7ef1dff8f2d917b17ceba8d1c6 91 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 84 8.5E-19 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VAA_02287 382aeb7ef1dff8f2d917b17ceba8d1c6 91 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 90 19.907 T 13-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VAA_00276 6f1b212f26f83e30ce42a7f5aa20b779 258 SUPERFAMILY SSF56300 1 242 2.78E-17 T 13-10-2018 VAA_00276 6f1b212f26f83e30ce42a7f5aa20b779 258 Pfam PF00149 Calcineurin-like phosphoesterase 1 223 3.2E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_00276 6f1b212f26f83e30ce42a7f5aa20b779 258 Gene3D G3DSA:3.60.21.10 1 257 6.7E-11 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 Gene3D G3DSA:3.30.1300.10 181 283 4.7E-27 T 13-10-2018 VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 1.4E-8 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 2.0E-107 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 6.3E-102 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 SUPERFAMILY SSF52374 1 280 3.94E-107 T 13-10-2018 VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.018 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VAA_00750 7a48679ecd7a4d4335b705616fb8eefa 293 Gene3D G3DSA:3.40.50.620 1 179 2.2E-81 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_01369 40c8351e902ea111f3ff15ec5f1fe988 315 SUPERFAMILY SSF56281 35 298 9.14E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01369 40c8351e902ea111f3ff15ec5f1fe988 315 Pfam PF12706 Beta-lactamase superfamily domain 64 274 4.6E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01369 40c8351e902ea111f3ff15ec5f1fe988 315 Gene3D G3DSA:3.60.15.10 34 298 1.5E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_03689 93f537c71556f1f65d7e754513df621f 779 SUPERFAMILY SSF47226 665 778 9.16E-28 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03689 93f537c71556f1f65d7e754513df621f 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 4.4E-18 T 13-10-2018 IPR000014 PAS domain VAA_03689 93f537c71556f1f65d7e754513df621f 779 Pfam PF08448 PAS fold 162 271 5.7E-18 T 13-10-2018 IPR013656 PAS fold-4 VAA_03689 93f537c71556f1f65d7e754513df621f 779 Pfam PF00072 Response regulator receiver domain 529 637 1.3E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03689 93f537c71556f1f65d7e754513df621f 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03689 93f537c71556f1f65d7e754513df621f 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03689 93f537c71556f1f65d7e754513df621f 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03689 93f537c71556f1f65d7e754513df621f 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03689 93f537c71556f1f65d7e754513df621f 779 Gene3D G3DSA:3.30.565.10 348 514 4.9E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03689 93f537c71556f1f65d7e754513df621f 779 SUPERFAMILY SSF47384 270 347 1.16E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_03689 93f537c71556f1f65d7e754513df621f 779 SMART SM00073 679 776 2.8E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_03689 93f537c71556f1f65d7e754513df621f 779 SMART SM00091 155 221 3.2E-7 T 13-10-2018 IPR000014 PAS domain VAA_03689 93f537c71556f1f65d7e754513df621f 779 Gene3D G3DSA:1.10.287.970 1 89 2.4E-38 T 13-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VAA_03689 93f537c71556f1f65d7e754513df621f 779 Gene3D G3DSA:1.20.120.160 659 779 3.6E-28 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03689 93f537c71556f1f65d7e754513df621f 779 SUPERFAMILY SSF55874 336 508 2.36E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03689 93f537c71556f1f65d7e754513df621f 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 9.1E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03689 93f537c71556f1f65d7e754513df621f 779 SMART SM00387 394 510 8.0E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03689 93f537c71556f1f65d7e754513df621f 779 SUPERFAMILY SSF52172 526 643 6.4E-25 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03689 93f537c71556f1f65d7e754513df621f 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.5E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03689 93f537c71556f1f65d7e754513df621f 779 Gene3D G3DSA:3.40.50.2300 522 656 5.4E-26 T 13-10-2018 VAA_03689 93f537c71556f1f65d7e754513df621f 779 Pfam PF01627 Hpt domain 690 760 1.4E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_03689 93f537c71556f1f65d7e754513df621f 779 PIRSF PIRSF003182 1 779 0.0 T 13-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAA_03689 93f537c71556f1f65d7e754513df621f 779 SMART SM00448 527 638 3.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03689 93f537c71556f1f65d7e754513df621f 779 SMART SM00388 282 347 3.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03689 93f537c71556f1f65d7e754513df621f 779 Gene3D G3DSA:3.30.450.20 150 267 1.7E-21 T 13-10-2018 VAA_03689 93f537c71556f1f65d7e754513df621f 779 SUPERFAMILY SSF55785 140 267 1.68E-24 T 13-10-2018 IPR035965 PAS domain superfamily VAA_03689 93f537c71556f1f65d7e754513df621f 779 Gene3D G3DSA:1.10.287.130 268 345 4.4E-22 T 13-10-2018 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 29 321 7.8E-48 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 29 334 8.8E-124 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 Gene3D G3DSA:3.50.50.60 31 333 3.5E-127 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 157 177 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 30 49 3.4E-39 T 13-10-2018 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 3.4E-39 T 13-10-2018 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.4E-39 T 13-10-2018 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 3.4E-39 T 13-10-2018 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 3.4E-39 T 13-10-2018 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 SUPERFAMILY SSF51905 22 334 6.86E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 Gene3D G3DSA:3.50.50.60 139 265 3.5E-127 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 162 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 29 51 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 259 280 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 220 236 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 297 315 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 77 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 165 189 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 83 93 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_02232 f3edd1ed15bc4c1d2fda69a13d88868b 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 136 3.6E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VAA_03356 4ad869a0306e35b7c57e910864243090 379 Gene3D G3DSA:3.40.50.720 6 364 1.0E-144 T 13-10-2018 VAA_03356 4ad869a0306e35b7c57e910864243090 379 SMART SM00859 5 129 1.4E-19 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAA_03356 4ad869a0306e35b7c57e910864243090 379 PIRSF PIRSF000148 3 379 1.0E-64 T 13-10-2018 VAA_03356 4ad869a0306e35b7c57e910864243090 379 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 269 283 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03356 4ad869a0306e35b7c57e910864243090 379 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 151 361 3.9E-57 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_03356 4ad869a0306e35b7c57e910864243090 379 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 4 374 3.9E-186 T 13-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03356 4ad869a0306e35b7c57e910864243090 379 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 375 32.533 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03356 4ad869a0306e35b7c57e910864243090 379 SUPERFAMILY SSF51735 4 154 2.14E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03356 4ad869a0306e35b7c57e910864243090 379 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 127 9.3E-22 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VAA_03356 4ad869a0306e35b7c57e910864243090 379 Gene3D G3DSA:3.30.360.10 142 358 1.0E-144 T 13-10-2018 VAA_03356 4ad869a0306e35b7c57e910864243090 379 SUPERFAMILY SSF55347 141 362 3.27E-78 T 13-10-2018 VAA_00801 f6f7e8007701bf6885a18bb783cfaff9 114 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 4.0E-45 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAA_00801 f6f7e8007701bf6885a18bb783cfaff9 114 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 4.0E-45 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAA_00801 f6f7e8007701bf6885a18bb783cfaff9 114 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 4.0E-45 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAA_00801 f6f7e8007701bf6885a18bb783cfaff9 114 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 4.0E-45 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAA_00801 f6f7e8007701bf6885a18bb783cfaff9 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 2.6E-26 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAA_00801 f6f7e8007701bf6885a18bb783cfaff9 114 Pfam PF03840 Preprotein translocase SecG subunit 7 75 2.2E-22 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VAA_03123 2b3779866c285eba1733c4827e67e991 266 Gene3D G3DSA:1.10.10.10 31 99 4.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03123 2b3779866c285eba1733c4827e67e991 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 72 88 4.7E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_03123 2b3779866c285eba1733c4827e67e991 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 72 4.7E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_03123 2b3779866c285eba1733c4827e67e991 266 SMART SM00866 121 258 3.5E-32 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAA_03123 2b3779866c285eba1733c4827e67e991 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 35 98 2.3E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_03123 2b3779866c285eba1733c4827e67e991 266 SUPERFAMILY SSF64288 125 261 2.83E-37 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_03123 2b3779866c285eba1733c4827e67e991 266 SMART SM00345 39 98 7.2E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_03123 2b3779866c285eba1733c4827e67e991 266 Pfam PF07702 UTRA domain 121 258 2.7E-32 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAA_03123 2b3779866c285eba1733c4827e67e991 266 SUPERFAMILY SSF46785 29 102 1.42E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03123 2b3779866c285eba1733c4827e67e991 266 Gene3D G3DSA:3.40.1410.10 118 254 2.5E-31 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_03123 2b3779866c285eba1733c4827e67e991 266 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 34 263 3.0E-94 T 13-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VAA_03335 ade6650cae49cc8f85a341af9dc419bb 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 3.1E-74 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_03335 ade6650cae49cc8f85a341af9dc419bb 476 Gene3D G3DSA:3.30.1360.60 395 475 1.6E-29 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_03335 ade6650cae49cc8f85a341af9dc419bb 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 7.6E-199 T 13-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VAA_03335 ade6650cae49cc8f85a341af9dc419bb 476 SUPERFAMILY SSF55604 399 472 3.79E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_03335 ade6650cae49cc8f85a341af9dc419bb 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 2.3E-12 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_03335 ade6650cae49cc8f85a341af9dc419bb 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 458 4.2E-21 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 165 9.2E-22 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 Pfam PF14815 NUDIX domain 231 343 5.7E-24 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 SMART SM00525 189 209 1.9E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 Gene3D G3DSA:1.10.1670.10 7 209 4.1E-88 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 SUPERFAMILY SSF55811 218 345 4.61E-27 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 Gene3D G3DSA:3.90.79.10 223 346 1.5E-15 T 13-10-2018 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 Pfam PF00633 Helix-hairpin-helix motif 97 125 2.6E-6 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 SUPERFAMILY SSF48150 3 223 9.58E-76 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 SMART SM00478 37 188 8.8E-50 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 Gene3D G3DSA:1.10.340.30 19 130 4.1E-88 T 13-10-2018 VAA_01666 cc180c53aaa0eabf205185f00d18c223 351 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 263 7.5E-128 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VAA_02653 e0bc05dfabdf87a678918659a3033675 68 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 9.2E-34 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VAA_02653 e0bc05dfabdf87a678918659a3033675 68 Gene3D G3DSA:1.10.10.610 1 68 1.1E-28 T 13-10-2018 IPR036685 YehU-like superfamily VAA_02653 e0bc05dfabdf87a678918659a3033675 68 PIRSF PIRSF006169 1 68 1.6E-34 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VAA_02653 e0bc05dfabdf87a678918659a3033675 68 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 3.0E-17 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VAA_02653 e0bc05dfabdf87a678918659a3033675 68 SUPERFAMILY SSF118001 1 67 8.5E-27 T 13-10-2018 IPR036685 YehU-like superfamily VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 187.099 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PRINTS PR00471 Acetate kinase family signature 172 185 1.3E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PRINTS PR00471 Acetate kinase family signature 377 389 1.3E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PRINTS PR00471 Acetate kinase family signature 298 311 1.3E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PRINTS PR00471 Acetate kinase family signature 5 16 1.3E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PRINTS PR00471 Acetate kinase family signature 202 223 1.3E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 Gene3D G3DSA:3.30.420.40 2 194 3.8E-72 T 13-10-2018 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 Gene3D G3DSA:3.30.420.40 195 397 2.5E-83 T 13-10-2018 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 PIRSF PIRSF000722 1 397 3.8E-147 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 6.5E-172 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 SUPERFAMILY SSF53067 3 195 3.11E-63 T 13-10-2018 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 SUPERFAMILY SSF53067 157 395 4.49E-85 T 13-10-2018 VAA_03242 4855f6fe943c4ac23101d47bfb0ad148 398 Pfam PF00871 Acetokinase family 5 390 1.4E-165 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_01558 5822b114e56350ca73329349e451a787 333 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 31 329 1.8E-132 T 13-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VAA_01558 5822b114e56350ca73329349e451a787 333 SUPERFAMILY SSF53822 30 295 2.16E-33 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01558 5822b114e56350ca73329349e451a787 333 Gene3D G3DSA:3.40.50.2300 32 301 7.5E-110 T 13-10-2018 VAA_01558 5822b114e56350ca73329349e451a787 333 Gene3D G3DSA:3.40.50.2300 139 325 7.5E-110 T 13-10-2018 VAA_01558 5822b114e56350ca73329349e451a787 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 30 285 2.0E-25 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAA_00540 bf3b07734a548055538a170fdfb33756 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 2.1E-102 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VAA_00540 bf3b07734a548055538a170fdfb33756 501 Gene3D G3DSA:1.10.3210.10 309 501 9.2E-58 T 13-10-2018 VAA_00540 bf3b07734a548055538a170fdfb33756 501 Gene3D G3DSA:3.30.420.150 116 294 6.8E-91 T 13-10-2018 VAA_00540 bf3b07734a548055538a170fdfb33756 501 SUPERFAMILY SSF109604 312 500 3.06E-46 T 13-10-2018 VAA_00540 bf3b07734a548055538a170fdfb33756 501 PIRSF PIRSF001267 2 501 6.6E-201 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VAA_00540 bf3b07734a548055538a170fdfb33756 501 SUPERFAMILY SSF53067 137 308 3.88E-45 T 13-10-2018 VAA_00540 bf3b07734a548055538a170fdfb33756 501 Gene3D G3DSA:3.30.420.40 13 302 6.8E-91 T 13-10-2018 VAA_00540 bf3b07734a548055538a170fdfb33756 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 3.3E-87 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VAA_00540 bf3b07734a548055538a170fdfb33756 501 SUPERFAMILY SSF53067 12 132 1.44E-36 T 13-10-2018 VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 459 2.1E-26 T 13-10-2018 IPR000160 GGDEF domain VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 SMART SM00267 340 496 7.2E-22 T 13-10-2018 IPR000160 GGDEF domain VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 SUPERFAMILY SSF55073 356 458 7.14E-28 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 Gene3D G3DSA:3.30.70.270 337 485 3.5E-33 T 13-10-2018 VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 Gene3D G3DSA:3.30.450.350 77 298 2.3E-8 T 13-10-2018 VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 454 9.6E-26 T 13-10-2018 IPR000160 GGDEF domain VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 Pfam PF03924 CHASE domain 79 266 3.4E-23 T 13-10-2018 IPR006189 CHASE domain VAA_01461 4b7aa114e8efe46ab490c53b2de2de7d 515 SMART SM01079 72 268 3.4E-24 T 13-10-2018 IPR006189 CHASE domain VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 5.3E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 Pfam PF00209 Sodium:neurotransmitter symporter family 123 474 6.6E-78 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 SUPERFAMILY SSF161070 3 470 3.53E-146 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VAA_03332 cc31f61acda04c287d09cf09baa0a43e 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 Pfam PF00072 Response regulator receiver domain 11 121 6.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 SUPERFAMILY SSF109604 147 350 1.19E-33 T 13-10-2018 VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 SUPERFAMILY SSF52172 5 132 1.12E-36 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 SMART SM00471 170 321 2.7E-9 T 13-10-2018 IPR003607 HD/PDEase domain VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 Pfam PF13487 HD domain 233 303 2.8E-18 T 13-10-2018 VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 SMART SM00448 9 121 1.5E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 Gene3D G3DSA:3.40.50.2300 4 141 5.3E-36 T 13-10-2018 VAA_02952 45bba15aec4f2061c2f2c5eaa390f0e9 364 Gene3D G3DSA:1.10.3210.10 148 364 6.2E-77 T 13-10-2018 VAA_02143 464f06b6401fc4e258dd0ee5c208899f 578 Pfam PF02065 Melibiase 161 350 2.7E-21 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VAA_02143 464f06b6401fc4e258dd0ee5c208899f 578 Gene3D G3DSA:3.20.20.70 187 494 2.8E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02143 464f06b6401fc4e258dd0ee5c208899f 578 SUPERFAMILY SSF51445 191 524 3.71E-75 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 Gene3D G3DSA:3.20.20.220 151 525 2.8E-129 T 13-10-2018 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1036 5.3E-247 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 Gene3D G3DSA:3.40.309.10 814 1006 5.4E-148 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 Pfam PF00171 Aldehyde dehydrogenase family 584 1036 1.7E-117 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 SUPERFAMILY SSF51730 190 530 1.06E-113 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 SUPERFAMILY SSF81935 17 189 3.92E-62 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 Pfam PF01619 Proline dehydrogenase 197 490 1.2E-91 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.5E-44 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 SUPERFAMILY SSF53720 576 1036 8.38E-126 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 PIRSF PIRSF000197 3 1040 0.0 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VAA_01923 a850a5352bc9960981dd0086d4d5bc0b 1040 Gene3D G3DSA:3.40.605.10 556 1036 5.4E-148 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 Gene3D G3DSA:3.40.50.2300 1 137 1.2E-33 T 13-10-2018 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 Pfam PF00072 Response regulator receiver domain 5 113 1.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 SMART SM00862 158 234 3.4E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 Gene3D G3DSA:1.10.10.10 138 237 7.0E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 SMART SM00448 3 113 4.1E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 SUPERFAMILY SSF46894 134 235 5.39E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02169 76f1cd8d2ccb442bd02c7cd0ba327007 237 SUPERFAMILY SSF52172 2 124 4.13E-36 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 Gene3D G3DSA:2.40.50.140 287 344 4.2E-49 T 13-10-2018 VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 Gene3D G3DSA:2.40.50.100 239 361 4.2E-49 T 13-10-2018 VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 SMART SM00382 28 211 5.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 Gene3D G3DSA:3.40.50.300 1 238 7.0E-75 T 13-10-2018 VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 Pfam PF08402 TOBE domain 281 353 1.9E-9 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 Pfam PF00005 ABC transporter 20 161 4.0E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 SUPERFAMILY SSF52540 4 244 5.59E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01252 38c33eeadac08e49e36667712d41dfb1 372 SUPERFAMILY SSF50331 236 364 7.78E-30 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_00743 8fc4ce0d03f9dcdc3ca899fae3542a34 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 5.5E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00743 8fc4ce0d03f9dcdc3ca899fae3542a34 205 SUPERFAMILY SSF48498 108 198 1.01E-8 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_00743 8fc4ce0d03f9dcdc3ca899fae3542a34 205 Gene3D G3DSA:1.10.357.10 2 205 1.3E-79 T 13-10-2018 VAA_00743 8fc4ce0d03f9dcdc3ca899fae3542a34 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.0E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00743 8fc4ce0d03f9dcdc3ca899fae3542a34 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.0E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00743 8fc4ce0d03f9dcdc3ca899fae3542a34 205 SUPERFAMILY SSF46689 9 85 8.48E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03080 7d68fd638cd8babb930ceb148ba38d2b 342 Gene3D G3DSA:3.40.630.10 1 342 3.7E-120 T 13-10-2018 VAA_03080 7d68fd638cd8babb930ceb148ba38d2b 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 129.435 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VAA_03080 7d68fd638cd8babb930ceb148ba38d2b 342 SUPERFAMILY SSF53187 9 329 1.03E-76 T 13-10-2018 VAA_03080 7d68fd638cd8babb930ceb148ba38d2b 342 PIRSF PIRSF017020 4 336 8.4E-121 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VAA_03080 7d68fd638cd8babb930ceb148ba38d2b 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 330 8.7E-71 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Gene3D G3DSA:3.30.830.10 27 255 7.2E-55 T 13-10-2018 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 SUPERFAMILY SSF63411 745 924 2.67E-19 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 SUPERFAMILY SSF63411 305 472 1.28E-5 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Pfam PF00675 Insulinase (Peptidase family M16) 47 178 2.4E-20 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Pfam PF05193 Peptidase M16 inactive domain 206 387 4.5E-14 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Pfam PF05193 Peptidase M16 inactive domain 697 856 1.6E-15 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Gene3D G3DSA:3.30.830.10 740 924 5.7E-22 T 13-10-2018 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 SUPERFAMILY SSF63411 32 255 7.52E-40 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 SUPERFAMILY SSF63411 501 725 8.38E-16 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Gene3D G3DSA:3.30.830.10 520 725 2.2E-11 T 13-10-2018 VAA_02430 f3c5e4b831d3c4536bd870f25aa53411 930 Gene3D G3DSA:3.30.830.10 276 469 3.8E-8 T 13-10-2018 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 2.7E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 2.7E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 2.7E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 SUPERFAMILY SSF55890 281 349 3.4E-9 T 13-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 Gene3D G3DSA:3.30.450.20 33 164 3.6E-39 T 13-10-2018 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 Gene3D G3DSA:3.30.450.20 190 269 7.7E-8 T 13-10-2018 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 SUPERFAMILY SSF55874 345 493 1.22E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 495 9.6E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 SMART SM00387 377 496 6.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 Pfam PF17203 Single cache domain 3 41 168 4.0E-17 T 13-10-2018 IPR033463 Single cache domain 3 VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 Gene3D G3DSA:3.30.565.10 341 497 1.5E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 SUPERFAMILY SSF103190 39 168 1.22E-31 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_03057 1b04b607db4aae101d2b01f10cace6ad 498 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 279 330 1.5E-8 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain VAA_00794 c10218a9d790d379ddb7c4d3db2a9710 330 Pfam PF13609 Gram-negative porin 9 305 6.3E-30 T 13-10-2018 VAA_00794 c10218a9d790d379ddb7c4d3db2a9710 330 SUPERFAMILY SSF56935 23 330 2.09E-57 T 13-10-2018 VAA_00794 c10218a9d790d379ddb7c4d3db2a9710 330 Gene3D G3DSA:2.40.160.10 22 330 8.7E-67 T 13-10-2018 IPR023614 Porin domain superfamily VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Pfam PF09371 Tex-like protein N-terminal domain 9 192 1.3E-69 T 13-10-2018 IPR018974 Tex-like protein, N-terminal VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SUPERFAMILY SSF53098 322 469 1.82E-50 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.6E-56 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SUPERFAMILY SSF47781 470 557 1.67E-27 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Gene3D G3DSA:2.40.50.140 631 725 1.1E-28 T 13-10-2018 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SMART SM00316 649 720 3.7E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Gene3D G3DSA:1.10.3500.10 112 498 9.2E-157 T 13-10-2018 IPR023323 Tex-like domain superfamily VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Gene3D G3DSA:1.10.150.310 499 630 1.1E-50 T 13-10-2018 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Gene3D G3DSA:3.30.420.140 325 451 9.2E-157 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SUPERFAMILY SSF50249 637 723 2.16E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Gene3D G3DSA:1.10.10.650 2 109 7.7E-41 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SMART SM00732 326 424 6.0E-35 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SUPERFAMILY SSF47781 560 632 6.67E-19 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 SUPERFAMILY SSF158832 3 321 2.09E-119 T 13-10-2018 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Pfam PF00575 S1 RNA binding domain 648 720 9.7E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_00635 593b47821fee02f18ca3a839d0319fb9 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.0E-28 T 13-10-2018 VAA_00731 cc5cfa73650121629af97423de4d693c 525 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 1.5E-17 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal VAA_00731 cc5cfa73650121629af97423de4d693c 525 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 519 8.9E-222 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VAA_00731 cc5cfa73650121629af97423de4d693c 525 Gene3D G3DSA:3.30.300.160 63 140 2.1E-8 T 13-10-2018 VAA_00731 cc5cfa73650121629af97423de4d693c 525 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_00731 cc5cfa73650121629af97423de4d693c 525 SUPERFAMILY SSF52540 172 516 1.58E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00731 cc5cfa73650121629af97423de4d693c 525 Gene3D G3DSA:3.30.450.90 151 288 3.5E-45 T 13-10-2018 VAA_00731 cc5cfa73650121629af97423de4d693c 525 Pfam PF00437 Type II/IV secretion system protein 188 455 2.5E-87 T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_00731 cc5cfa73650121629af97423de4d693c 525 SUPERFAMILY SSF160246 1 140 2.59E-32 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VAA_00731 cc5cfa73650121629af97423de4d693c 525 Gene3D G3DSA:3.40.50.300 289 524 1.5E-92 T 13-10-2018 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 Gene3D G3DSA:3.20.20.70 2 336 2.2E-141 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 PIRSF PIRSF000164 10 336 1.1E-102 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 6.6E-91 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 5.7E-149 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 SUPERFAMILY SSF51395 1 336 2.24E-107 T 13-10-2018 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.194 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VAA_01864 662b6b86eb1cf045db48efe7f8841b39 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 Gene3D G3DSA:3.40.930.10 1 142 3.0E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 Gene3D G3DSA:3.30.1340.10 290 373 1.5E-27 T 13-10-2018 IPR035895 HPr-like superfamily VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 Pfam PF00381 PTS HPr component phosphorylation site 295 373 1.4E-25 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 Gene3D G3DSA:3.40.930.10 149 275 2.4E-6 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 SUPERFAMILY SSF55804 3 141 5.1E-39 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 302 309 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 5.1E-31 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 PRINTS PR00107 Phosphocarrier protein signature 302 318 7.3E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 PRINTS PR00107 Phosphocarrier protein signature 330 345 7.3E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 PRINTS PR00107 Phosphocarrier protein signature 345 362 7.3E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 SUPERFAMILY SSF55804 149 276 8.55E-19 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 331 346 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 294 373 2.5E-23 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01007 5181d008792fc7fd06b84948eeb0d98e 380 SUPERFAMILY SSF55594 295 379 7.2E-24 T 13-10-2018 IPR035895 HPr-like superfamily VAA_02605 e3d481e652b2031e2340efc583b43877 173 SMART SM00841 116 171 5.1E-31 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAA_02605 e3d481e652b2031e2340efc583b43877 173 Gene3D G3DSA:2.40.50.140 51 114 6.8E-29 T 13-10-2018 VAA_02605 e3d481e652b2031e2340efc583b43877 173 Pfam PF01132 Elongation factor P (EF-P) OB domain 56 108 2.2E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAA_02605 e3d481e652b2031e2340efc583b43877 173 TIGRFAM TIGR00038 efp: translation elongation factor P 2 172 9.7E-73 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VAA_02605 e3d481e652b2031e2340efc583b43877 173 ProSitePatterns PS01275 Elongation factor P signature. 137 156 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VAA_02605 e3d481e652b2031e2340efc583b43877 173 SUPERFAMILY SSF50249 55 113 1.93E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02605 e3d481e652b2031e2340efc583b43877 173 PIRSF PIRSF005901 1 173 9.8E-61 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP VAA_02605 e3d481e652b2031e2340efc583b43877 173 SUPERFAMILY SSF50104 1 48 5.9E-15 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAA_02605 e3d481e652b2031e2340efc583b43877 173 Gene3D G3DSA:2.30.30.30 1 43 1.7E-21 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VAA_02605 e3d481e652b2031e2340efc583b43877 173 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 1 47 2.5E-19 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like VAA_02605 e3d481e652b2031e2340efc583b43877 173 SUPERFAMILY SSF50249 115 172 9.42E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02605 e3d481e652b2031e2340efc583b43877 173 Hamap MF_00141 Elongation factor P [efp]. 1 172 46.052 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VAA_02605 e3d481e652b2031e2340efc583b43877 173 SMART SM01185 54 108 3.9E-25 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VAA_02605 e3d481e652b2031e2340efc583b43877 173 Pfam PF09285 Elongation factor P, C-terminal 116 171 9.0E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VAA_02605 e3d481e652b2031e2340efc583b43877 173 Gene3D G3DSA:2.40.50.140 115 173 5.8E-27 T 13-10-2018 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 Gene3D G3DSA:1.20.1560.10 2 328 3.8E-80 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 SUPERFAMILY SSF52540 334 580 5.83E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 Gene3D G3DSA:3.40.50.300 329 581 1.9E-97 T 13-10-2018 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 Pfam PF00005 ABC transporter 359 509 9.1E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 7.0E-242 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 Pfam PF00664 ABC transporter transmembrane region 28 293 1.6E-54 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 SMART SM00382 368 555 1.1E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 SUPERFAMILY SSF90123 14 327 5.62E-72 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_03200 0e25d1a630a03dc215aefaca804031f3 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02168 7f34cc35898647823e5b53fe3bdc83a6 274 Pfam PF02698 DUF218 domain 89 251 1.4E-25 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VAA_01700 9630e3564fcc0617afe4a67285ccbebd 174 SUPERFAMILY SSF116734 48 149 3.71E-9 T 13-10-2018 VAA_01700 9630e3564fcc0617afe4a67285ccbebd 174 Gene3D G3DSA:3.90.220.20 2 169 3.6E-9 T 13-10-2018 VAA_04290 5edc0e35589eb4de51e09dfb05b88a08 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 8.4E-201 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAA_04290 5edc0e35589eb4de51e09dfb05b88a08 458 SUPERFAMILY SSF52467 285 458 5.72E-80 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_04290 5edc0e35589eb4de51e09dfb05b88a08 458 PIRSF PIRSF000204 1 458 2.3E-233 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VAA_04290 5edc0e35589eb4de51e09dfb05b88a08 458 Gene3D G3DSA:3.40.50.1220 282 458 3.7E-89 T 13-10-2018 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Pfam PF13291 ACT domain 627 703 2.1E-13 T 13-10-2018 IPR002912 ACT domain VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 703 1.9E-267 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Gene3D G3DSA:3.30.460.10 193 325 3.9E-46 T 13-10-2018 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 SUPERFAMILY SSF81271 376 448 3.43E-20 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.8E-34 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 SUPERFAMILY SSF55021 631 703 9.92E-8 T 13-10-2018 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Pfam PF13328 HD domain 28 175 1.0E-52 T 13-10-2018 IPR003607 HD/PDEase domain VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 SUPERFAMILY SSF109604 3 190 5.02E-74 T 13-10-2018 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 SUPERFAMILY SSF81301 180 393 6.21E-59 T 13-10-2018 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 SMART SM00471 41 153 1.1E-9 T 13-10-2018 IPR003607 HD/PDEase domain VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Gene3D G3DSA:3.30.70.260 627 706 8.7E-13 T 13-10-2018 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Pfam PF02824 TGS domain 389 447 2.5E-18 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 SMART SM00954 235 345 1.7E-58 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Gene3D G3DSA:3.10.20.30 382 456 1.5E-28 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_00620 ef3ca1ada607745c8fa12d9f10314b95 706 Gene3D G3DSA:1.10.3210.10 3 190 4.1E-79 T 13-10-2018 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 Gene3D G3DSA:3.20.20.70 4 315 2.5E-132 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 4.0E-125 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 Pfam PF04055 Radical SAM superfamily 50 199 2.8E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 SMART SM00876 220 312 3.9E-46 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.523 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 9.6E-21 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 PIRSF PIRSF001619 1 319 1.7E-137 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 SMART SM00729 43 255 2.3E-39 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_03230 d243d243fb0ea5746a3b4164bf2ffdc5 350 SUPERFAMILY SSF102114 5 310 1.1E-89 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.9E-41 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.9E-41 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.9E-41 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.9E-41 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.9E-41 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 Gene3D G3DSA:3.50.50.60 9 332 5.2E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.0E-149 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.8E-64 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PIRSF PIRSF000350 1 469 6.1E-83 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 SUPERFAMILY SSF51905 1 322 9.88E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.2E-68 T 13-10-2018 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 Gene3D G3DSA:3.50.50.60 150 271 5.2E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00742 8c88d04c9c036663e7116689e716c7e9 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 Gene3D G3DSA:3.40.50.300 141 310 8.3E-43 T 13-10-2018 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 SMART SM00382 166 303 1.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 SUPERFAMILY SSF46689 352 438 8.74E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 Pfam PF00158 Sigma-54 interaction domain 146 305 1.1E-39 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 5.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 Gene3D G3DSA:1.10.10.60 386 440 1.6E-12 T 13-10-2018 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 SUPERFAMILY SSF52172 27 190 7.9E-8 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 5.1E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 5.1E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 Gene3D G3DSA:1.10.8.60 312 382 1.7E-22 T 13-10-2018 VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 SUPERFAMILY SSF52540 146 372 8.75E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00376 c7f44b89859dd8b010a95d7d0ed722c8 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 34.685 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 PIRSF PIRSF004848 1 233 1.1E-76 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 Gene3D G3DSA:3.20.20.10 1 233 4.6E-85 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.8E-83 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 1.2E-30 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01657 d93e2c9da25178bfc5119fb79f3f793e 233 SUPERFAMILY SSF51419 1 228 9.42E-80 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 322 8.2E-148 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 SMART SM00729 85 294 2.8E-18 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 Gene3D G3DSA:3.20.20.70 29 294 1.2E-24 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 Pfam PF04055 Radical SAM superfamily 92 253 1.5E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 18 74 1.0E-8 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 SUPERFAMILY SSF102114 53 317 5.36E-68 T 13-10-2018 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 155.104 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_01104 bb1f6bdd5d388fb37576718e3a8bb93c 322 PIRSF PIRSF005963 2 321 4.6E-130 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 Pfam PF00571 CBS domain 770 821 3.6E-4 T 13-10-2018 IPR000644 CBS domain VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 Gene3D G3DSA:3.10.580.10 702 824 5.2E-12 T 13-10-2018 VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 SMART SM00091 132 198 5.9E-4 T 13-10-2018 IPR000014 PAS domain VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 SUPERFAMILY SSF141868 424 669 5.49E-68 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 SUPERFAMILY SSF55785 125 241 4.95E-16 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 SUPERFAMILY SSF54631 703 822 3.92E-13 T 13-10-2018 VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 Pfam PF00989 PAS fold 134 238 2.6E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 242 1.6E-10 T 13-10-2018 IPR000014 PAS domain VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 Pfam PF00563 EAL domain 426 661 2.3E-58 T 13-10-2018 IPR001633 EAL domain VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 Gene3D G3DSA:3.20.20.450 406 668 1.4E-70 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 SMART SM00052 419 666 1.0E-57 T 13-10-2018 IPR001633 EAL domain VAA_02265 5384d5f9c2b9a54e973b1ca855853e9e 824 Gene3D G3DSA:3.30.450.20 129 244 2.4E-17 T 13-10-2018 VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 Gene3D G3DSA:1.10.10.10 6 80 2.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 SMART SM00345 20 79 5.6E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 SUPERFAMILY SSF53383 110 471 4.26E-73 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 7.3E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 Gene3D G3DSA:3.40.640.10 149 365 6.0E-79 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 SUPERFAMILY SSF46785 12 81 4.57E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 Gene3D G3DSA:3.90.1150.10 122 477 6.0E-79 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01302 f2d60a23d9394cc88e9390f61fb55b1f 486 Pfam PF00155 Aminotransferase class I and II 133 462 9.6E-26 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_02676 8d8426e66f417d387b043734771d00d5 232 SMART SM00322 60 125 1.8E-7 T 13-10-2018 IPR004087 K Homology domain GO:0003676 VAA_02676 8d8426e66f417d387b043734771d00d5 232 SUPERFAMILY SSF54821 108 206 1.7E-40 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02676 8d8426e66f417d387b043734771d00d5 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 8.4E-42 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02676 8d8426e66f417d387b043734771d00d5 232 Gene3D G3DSA:3.30.300.20 17 107 5.6E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_02676 8d8426e66f417d387b043734771d00d5 232 Pfam PF07650 KH domain 38 111 5.3E-19 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02676 8d8426e66f417d387b043734771d00d5 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-98 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VAA_02676 8d8426e66f417d387b043734771d00d5 232 SUPERFAMILY SSF54814 2 106 1.78E-36 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAA_02676 8d8426e66f417d387b043734771d00d5 232 Gene3D G3DSA:3.30.1140.32 108 208 4.2E-45 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02676 8d8426e66f417d387b043734771d00d5 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02676 8d8426e66f417d387b043734771d00d5 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.846 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 SUPERFAMILY SSF46785 7 92 2.59E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 3.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 Pfam PF03466 LysR substrate binding domain 94 294 4.4E-43 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 Gene3D G3DSA:1.10.10.10 7 98 5.0E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 SUPERFAMILY SSF53850 96 295 2.72E-39 T 13-10-2018 VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.1E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.1E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.1E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03427 55bea7eed1e8550a55d093135b0f6b7b 300 Gene3D G3DSA:3.40.190.290 99 299 3.9E-46 T 13-10-2018 VAA_00418 e22af58db63764ad92d1368b0e8a2789 598 Gene3D G3DSA:1.20.1530.20 4 390 2.6E-13 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VAA_00418 e22af58db63764ad92d1368b0e8a2789 598 SUPERFAMILY SSF51735 399 494 3.26E-8 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00418 e22af58db63764ad92d1368b0e8a2789 598 Pfam PF00999 Sodium/hydrogen exchanger family 12 386 5.9E-32 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAA_00418 e22af58db63764ad92d1368b0e8a2789 598 Gene3D G3DSA:3.40.50.720 397 509 7.4E-9 T 13-10-2018 VAA_00418 e22af58db63764ad92d1368b0e8a2789 598 Pfam PF02254 TrkA-N domain 399 491 1.3E-5 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAA_01320 3a11552f9d650d051f32f9eb5c1d4068 299 SUPERFAMILY SSF46785 1 87 4.89E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01320 3a11552f9d650d051f32f9eb5c1d4068 299 Gene3D G3DSA:3.40.190.290 90 292 6.1E-62 T 13-10-2018 VAA_01320 3a11552f9d650d051f32f9eb5c1d4068 299 Gene3D G3DSA:1.10.10.10 1 85 1.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01320 3a11552f9d650d051f32f9eb5c1d4068 299 SUPERFAMILY SSF53850 88 292 5.79E-43 T 13-10-2018 VAA_01320 3a11552f9d650d051f32f9eb5c1d4068 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.2E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01320 3a11552f9d650d051f32f9eb5c1d4068 299 Pfam PF03466 LysR substrate binding domain 88 291 1.1E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_03745 c7d873f9ba2d44c0f857f2a95f89f04f 198 SUPERFAMILY SSF53474 6 197 1.11E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03745 c7d873f9ba2d44c0f857f2a95f89f04f 198 Pfam PF05728 Uncharacterised protein family (UPF0227) 11 196 2.7E-65 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VAA_03745 c7d873f9ba2d44c0f857f2a95f89f04f 198 Gene3D G3DSA:3.40.50.1820 11 198 1.4E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 Pfam PF10150 Ribonuclease E/G family 124 393 5.7E-102 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 Gene3D G3DSA:3.40.1260.20 403 488 1.2E-6 T 13-10-2018 VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 9.2E-172 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 Gene3D G3DSA:2.40.50.140 31 127 6.1E-32 T 13-10-2018 VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 SMART SM00316 37 122 5.8E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_01715 5018bca7faa6889ddfb8d5f172a64674 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 563 4.4E-207 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 Gene3D G3DSA:3.40.50.970 9 195 5.4E-67 T 13-10-2018 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 SUPERFAMILY SSF52518 12 193 2.67E-61 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 206 339 2.3E-39 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 540 1.9E-47 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 Gene3D G3DSA:3.40.50.1220 198 362 5.0E-49 T 13-10-2018 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 Gene3D G3DSA:3.40.50.970 365 565 7.2E-65 T 13-10-2018 VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 SUPERFAMILY SSF52467 200 358 1.79E-54 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 SUPERFAMILY SSF52518 375 562 1.13E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_00870 df7ebd2fcad65f700db01770a56b19d0 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 184 4.1E-55 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAA_00128 6498c882ff02ad56d3fe0d49fddbc562 118 Pfam PF02635 DsrE/DsrF-like family 2 118 8.1E-26 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VAA_00128 6498c882ff02ad56d3fe0d49fddbc562 118 SUPERFAMILY SSF75169 1 118 1.61E-33 T 13-10-2018 IPR027396 DsrEFH-like VAA_00128 6498c882ff02ad56d3fe0d49fddbc562 118 Gene3D G3DSA:3.40.1260.10 1 118 1.7E-35 T 13-10-2018 IPR027396 DsrEFH-like VAA_00128 6498c882ff02ad56d3fe0d49fddbc562 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.4E-42 T 13-10-2018 IPR017462 Sulphur relay, TusC/DsrF VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 Gene3D G3DSA:3.30.470.20 195 389 2.0E-57 T 13-10-2018 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 8.9E-5 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 SUPERFAMILY SSF56059 111 313 1.41E-55 T 13-10-2018 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 Gene3D G3DSA:3.30.1490.20 121 194 4.5E-31 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 SUPERFAMILY SSF51246 317 389 2.35E-17 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 2.3E-191 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 Pfam PF02222 ATP-grasp domain 121 293 9.1E-56 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 Gene3D G3DSA:3.40.50.20 1 120 2.7E-53 T 13-10-2018 VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 SUPERFAMILY SSF52440 2 110 4.75E-35 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_03101 30d8f1833b5956d583643fc9ea691b04 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.396 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VAA_01640 75a25526192c7153a550f0344dfd3313 487 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 174 184 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAA_01640 75a25526192c7153a550f0344dfd3313 487 Gene3D G3DSA:1.20.1080.10 8 274 1.5E-87 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAA_01640 75a25526192c7153a550f0344dfd3313 487 Pfam PF01226 Formate/nitrite transporter 21 281 2.0E-71 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAA_01640 75a25526192c7153a550f0344dfd3313 487 SUPERFAMILY SSF54631 312 468 1.35E-20 T 13-10-2018 VAA_01640 75a25526192c7153a550f0344dfd3313 487 Gene3D G3DSA:3.10.580.10 310 468 9.8E-22 T 13-10-2018 VAA_01640 75a25526192c7153a550f0344dfd3313 487 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 89 98 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAA_01640 75a25526192c7153a550f0344dfd3313 487 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 32 284 6.0E-75 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAA_01640 75a25526192c7153a550f0344dfd3313 487 Pfam PF00571 CBS domain 317 366 1.5E-6 T 13-10-2018 IPR000644 CBS domain VAA_01640 75a25526192c7153a550f0344dfd3313 487 Pfam PF00571 CBS domain 386 468 9.8E-4 T 13-10-2018 IPR000644 CBS domain VAA_01640 75a25526192c7153a550f0344dfd3313 487 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 20 285 1.8E-112 T 13-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VAA_01640 75a25526192c7153a550f0344dfd3313 487 SMART SM00116 324 372 0.15 T 13-10-2018 IPR000644 CBS domain VAA_01640 75a25526192c7153a550f0344dfd3313 487 SMART SM00116 422 469 13.0 T 13-10-2018 IPR000644 CBS domain VAA_02076 d5acdb19520736480722576318ac4c47 787 Pfam PF00501 AMP-binding enzyme 474 780 2.5E-50 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_02076 d5acdb19520736480722576318ac4c47 787 Gene3D G3DSA:3.30.559.10 21 223 7.8E-36 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAA_02076 d5acdb19520736480722576318ac4c47 787 SUPERFAMILY SSF52777 207 436 2.0E-32 T 13-10-2018 VAA_02076 d5acdb19520736480722576318ac4c47 787 SUPERFAMILY SSF56801 431 783 4.06E-61 T 13-10-2018 VAA_02076 d5acdb19520736480722576318ac4c47 787 Gene3D G3DSA:3.40.50.980 495 630 6.3E-71 T 13-10-2018 VAA_02076 d5acdb19520736480722576318ac4c47 787 Pfam PF00668 Condensation domain 16 452 4.7E-62 T 13-10-2018 IPR001242 Condensation domain VAA_02076 d5acdb19520736480722576318ac4c47 787 ProSitePatterns PS00455 Putative AMP-binding domain signature. 615 626 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02076 d5acdb19520736480722576318ac4c47 787 SUPERFAMILY SSF52777 24 200 5.0E-24 T 13-10-2018 VAA_02076 d5acdb19520736480722576318ac4c47 787 Gene3D G3DSA:3.30.559.30 258 444 7.4E-39 T 13-10-2018 VAA_02076 d5acdb19520736480722576318ac4c47 787 Gene3D G3DSA:3.40.50.980 477 783 6.3E-71 T 13-10-2018 VAA_00688 93cbb0f5d6940d9f15986f1b1baafc33 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.261 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VAA_00688 93cbb0f5d6940d9f15986f1b1baafc33 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 8.1E-74 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VAA_00688 93cbb0f5d6940d9f15986f1b1baafc33 267 Pfam PF02673 Bacitracin resistance protein BacA 6 257 1.0E-81 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VAA_03105 67bd719339496c057cc612a61a0bf3a5 257 Gene3D G3DSA:3.30.460.10 58 192 3.6E-5 T 13-10-2018 VAA_03105 67bd719339496c057cc612a61a0bf3a5 257 SUPERFAMILY SSF81301 63 214 3.43E-14 T 13-10-2018 VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 Pfam PF00106 short chain dehydrogenase 2 182 1.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 SUPERFAMILY SSF51735 2 234 7.57E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_02274 3b7ea61de89cb4e822802caa55af2719 240 Gene3D G3DSA:3.40.50.720 1 230 2.3E-45 T 13-10-2018 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 Gene3D G3DSA:3.10.150.10 248 366 5.1E-39 T 13-10-2018 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.4E-108 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.8E-37 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 SMART SM00480 17 362 2.9E-144 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 SUPERFAMILY SSF55979 245 366 6.73E-36 T 13-10-2018 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 Gene3D G3DSA:3.10.150.10 124 247 2.8E-36 T 13-10-2018 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 8.2E-36 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 SUPERFAMILY SSF55979 126 244 5.1E-29 T 13-10-2018 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.9E-38 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 PIRSF PIRSF000804 1 366 4.1E-117 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 Gene3D G3DSA:3.10.150.10 1 122 4.1E-41 T 13-10-2018 VAA_00847 1467645bb9617b7cc34fb27c1477b6ab 366 SUPERFAMILY SSF55979 1 118 1.84E-28 T 13-10-2018 VAA_02471 388f52b0749b59689c689770e77efef8 346 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 106 329 3.4E-15 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VAA_02471 388f52b0749b59689c689770e77efef8 346 SUPERFAMILY SSF53756 31 323 1.81E-40 T 13-10-2018 VAA_02471 388f52b0749b59689c689770e77efef8 346 Gene3D G3DSA:3.40.50.2000 25 179 4.3E-15 T 13-10-2018 VAA_02471 388f52b0749b59689c689770e77efef8 346 Gene3D G3DSA:3.40.50.2000 186 343 9.0E-17 T 13-10-2018 VAA_03596 4f4dedcf73ec6071b45183f6b132049e 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.3 T 13-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VAA_03596 4f4dedcf73ec6071b45183f6b132049e 154 Gene3D G3DSA:3.40.50.2020 1 152 8.2E-41 T 13-10-2018 VAA_03596 4f4dedcf73ec6071b45183f6b132049e 154 SUPERFAMILY SSF53271 5 147 2.56E-27 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_03596 4f4dedcf73ec6071b45183f6b132049e 154 Pfam PF00156 Phosphoribosyl transferase domain 32 145 6.3E-13 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAA_04302 b6a578f3b72d99cbea3725f9f783a014 194 SUPERFAMILY SSF46689 2 63 1.08E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_04302 b6a578f3b72d99cbea3725f9f783a014 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 55 6.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_04302 b6a578f3b72d99cbea3725f9f783a014 194 Gene3D G3DSA:1.10.357.10 69 190 4.1E-15 T 13-10-2018 VAA_04302 b6a578f3b72d99cbea3725f9f783a014 194 SUPERFAMILY SSF48498 79 174 5.56E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_04302 b6a578f3b72d99cbea3725f9f783a014 194 Gene3D G3DSA:1.10.10.60 1 65 5.5E-19 T 13-10-2018 VAA_02667 3e4fe0fd283cd684c71d0cc02ddd934c 112 Gene3D G3DSA:3.40.1280.10 1 110 5.5E-42 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_02667 3e4fe0fd283cd684c71d0cc02ddd934c 112 SUPERFAMILY SSF75217 4 110 4.91E-33 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_02667 3e4fe0fd283cd684c71d0cc02ddd934c 112 Pfam PF00588 SpoU rRNA Methylase family 3 103 1.1E-26 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Gene3D G3DSA:3.30.450.20 130 226 1.5E-13 T 13-10-2018 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Gene3D G3DSA:3.30.70.270 432 600 2.6E-37 T 13-10-2018 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 582 3.4E-31 T 13-10-2018 IPR000160 GGDEF domain VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Pfam PF00563 EAL domain 605 840 7.3E-70 T 13-10-2018 IPR001633 EAL domain VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 SUPERFAMILY SSF55073 439 590 2.98E-31 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 432 582 2.0E-24 T 13-10-2018 IPR000160 GGDEF domain VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 SMART SM00052 598 846 3.8E-104 T 13-10-2018 IPR001633 EAL domain VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 SUPERFAMILY SSF141868 605 850 3.4E-82 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 SMART SM00304 375 428 0.0019 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Pfam PF02743 Cache domain 129 293 8.1E-18 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 SUPERFAMILY SSF158472 376 425 1.31E-6 T 13-10-2018 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Gene3D G3DSA:1.20.1480.50 338 431 3.0E-7 T 13-10-2018 VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 SMART SM00267 423 588 4.6E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_00669 82e0dc47f112231d1e6b6f0f3ce0bc6c 857 Gene3D G3DSA:3.20.20.450 601 855 2.2E-87 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01304 c5563427dc154a8eed867f9281585f33 81 Gene3D G3DSA:2.30.30.400 2 79 8.0E-16 T 13-10-2018 IPR038626 Rof-like superfamily VAA_01304 c5563427dc154a8eed867f9281585f33 81 SUPERFAMILY SSF101744 1 80 3.71E-20 T 13-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VAA_01304 c5563427dc154a8eed867f9281585f33 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.8E-29 T 13-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF54211 6 145 1.32E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00808 791566f427b769b4864d4f987cfc986b 708 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.9E-20 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.3E-18 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 8.5E-13 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SMART SM00316 621 691 7.4E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Pfam PF00013 KH domain 557 615 9.8E-10 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Gene3D G3DSA:2.40.50.140 623 694 1.2E-30 T 13-10-2018 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Gene3D G3DSA:3.30.230.70 2 229 6.7E-77 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.243 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.3E-23 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Pfam PF00575 S1 RNA binding domain 620 691 9.7E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF54211 299 493 2.18E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00808 791566f427b769b4864d4f987cfc986b 708 SMART SM00322 553 618 3.5E-12 T 13-10-2018 IPR004087 K Homology domain GO:0003676 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Gene3D G3DSA:3.30.1370.10 551 622 2.0E-19 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF50249 608 695 1.46E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00808 791566f427b769b4864d4f987cfc986b 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF55666 451 550 1.31E-27 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF55666 146 236 1.23E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 PIRSF PIRSF005499 3 707 6.6E-297 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAA_00808 791566f427b769b4864d4f987cfc986b 708 Gene3D G3DSA:3.30.230.70 234 550 4.1E-114 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF54791 553 630 1.61E-16 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VAA_00808 791566f427b769b4864d4f987cfc986b 708 SUPERFAMILY SSF46915 241 321 3.14E-18 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.5E-144 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 SUPERFAMILY SSF56024 315 496 1.0E-53 T 13-10-2018 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 SUPERFAMILY SSF143724 107 313 6.47E-64 T 13-10-2018 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 6.2E-31 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Pfam PF02503 Polyphosphate kinase middle domain 119 320 9.7E-48 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 PIRSF PIRSF015589 1 694 3.2E-250 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Gene3D G3DSA:3.30.1840.10 110 307 3.3E-75 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 SUPERFAMILY SSF56024 500 683 6.28E-68 T 13-10-2018 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 SUPERFAMILY SSF140356 4 104 3.66E-33 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.6E-263 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Gene3D G3DSA:1.20.58.310 9 109 4.6E-36 T 13-10-2018 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Gene3D G3DSA:3.30.870.10 500 686 6.8E-72 T 13-10-2018 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.255 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VAA_00539 c571c97757abb494b5264b5f72ad02b6 699 Gene3D G3DSA:3.30.870.10 319 499 1.4E-72 T 13-10-2018 VAA_03109 e2e44aeefb9cd423128c611c79aa7f2a 113 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.5E-26 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VAA_03109 e2e44aeefb9cd423128c611c79aa7f2a 113 Gene3D G3DSA:3.30.930.10 7 111 1.3E-17 T 13-10-2018 VAA_03109 e2e44aeefb9cd423128c611c79aa7f2a 113 SUPERFAMILY SSF46589 13 99 3.3E-23 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VAA_02883 f608a69171d6c2b940746714ab740589 273 Gene3D G3DSA:3.30.1240.10 82 195 2.9E-62 T 13-10-2018 VAA_02883 f608a69171d6c2b940746714ab740589 273 Gene3D G3DSA:3.40.50.1000 3 267 2.9E-62 T 13-10-2018 IPR023214 HAD superfamily VAA_02883 f608a69171d6c2b940746714ab740589 273 SUPERFAMILY SSF56784 1 270 6.18E-64 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02883 f608a69171d6c2b940746714ab740589 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 2.8E-64 T 13-10-2018 VAA_02883 f608a69171d6c2b940746714ab740589 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 VAA_02883 f608a69171d6c2b940746714ab740589 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 13-10-2018 VAA_02883 f608a69171d6c2b940746714ab740589 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 1.6E-22 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VAA_02883 f608a69171d6c2b940746714ab740589 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 3.4E-58 T 13-10-2018 IPR000150 Cof family GO:0016787 VAA_01773 a3bf5a8b3ec14443272c86aa2dc0b775 481 Pfam PF02386 Cation transport protein 44 475 1.5E-50 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VAA_01773 a3bf5a8b3ec14443272c86aa2dc0b775 481 PIRSF PIRSF006247 1 481 4.7E-165 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAA_01773 a3bf5a8b3ec14443272c86aa2dc0b775 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 3.4E-113 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAA_00802 b8e8811461102505b639556e286d8329 151 Gene3D G3DSA:3.30.300.70 1 80 1.2E-26 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily VAA_00802 b8e8811461102505b639556e286d8329 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 9.9E-20 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VAA_00802 b8e8811461102505b639556e286d8329 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.589 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VAA_00802 b8e8811461102505b639556e286d8329 151 SUPERFAMILY SSF75420 2 83 4.97E-26 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily VAA_00802 b8e8811461102505b639556e286d8329 151 SUPERFAMILY SSF74942 84 151 4.84E-17 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VAA_00802 b8e8811461102505b639556e286d8329 151 Pfam PF02576 RimP N-terminal domain 13 83 1.3E-29 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VAA_00089 2624dcb8846a4821b19804d5ae61bbff 90 Gene3D G3DSA:1.10.1220.10 1 49 1.4E-30 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAA_00089 2624dcb8846a4821b19804d5ae61bbff 90 SUPERFAMILY SSF47598 6 81 1.56E-18 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAA_00089 2624dcb8846a4821b19804d5ae61bbff 90 Gene3D G3DSA:1.20.890.30 50 90 1.7E-20 T 13-10-2018 VAA_00089 2624dcb8846a4821b19804d5ae61bbff 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 1.1E-21 T 13-10-2018 IPR014795 Vibrio phage ICP1, Orf50 VAA_00360 a1815669ae92ac2e294af1403172db5f 179 SUPERFAMILY SSF81342 6 167 2.64E-28 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAA_00360 a1815669ae92ac2e294af1403172db5f 179 Gene3D G3DSA:1.20.950.20 28 157 8.9E-10 T 13-10-2018 VAA_00360 a1815669ae92ac2e294af1403172db5f 179 Pfam PF01292 Prokaryotic cytochrome b561 9 158 9.7E-19 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAA_01809 e9c4b7f8f0df970dd0b724579cf032bd 288 Gene3D G3DSA:3.30.200.20 1 93 1.8E-20 T 13-10-2018 VAA_01809 e9c4b7f8f0df970dd0b724579cf032bd 288 Pfam PF03881 Fructosamine kinase 1 287 1.3E-120 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VAA_01809 e9c4b7f8f0df970dd0b724579cf032bd 288 Gene3D G3DSA:3.90.1200.10 97 287 8.1E-62 T 13-10-2018 VAA_01809 e9c4b7f8f0df970dd0b724579cf032bd 288 PIRSF PIRSF006221 1 288 8.3E-104 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VAA_01809 e9c4b7f8f0df970dd0b724579cf032bd 288 SUPERFAMILY SSF56112 5 282 3.06E-41 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 PIRSF PIRSF000110 13 507 3.8E-175 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 350 376 2.8E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 258 2.8E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 189 217 2.8E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 178 2.8E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 259 275 2.8E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 199 205 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 211 504 1.1E-112 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 28 209 4.1E-62 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 Gene3D G3DSA:3.30.360.10 198 506 4.9E-123 T 13-10-2018 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 24 504 2.4E-197 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 Gene3D G3DSA:3.40.50.720 22 197 2.8E-57 T 13-10-2018 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 24 505 84.963 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 SUPERFAMILY SSF55347 199 507 3.07E-113 T 13-10-2018 VAA_01352 39f09041aab0bd8b53f5523de2ff9d15 518 SUPERFAMILY SSF51735 16 212 5.12E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00332 f30a287129385242fedf0720e78a59ba 298 Pfam PF03466 LysR substrate binding domain 126 293 7.0E-14 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00332 f30a287129385242fedf0720e78a59ba 298 SUPERFAMILY SSF46785 7 87 1.43E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00332 f30a287129385242fedf0720e78a59ba 298 SUPERFAMILY SSF53850 101 292 3.98E-18 T 13-10-2018 VAA_00332 f30a287129385242fedf0720e78a59ba 298 Gene3D G3DSA:1.10.10.10 8 93 5.1E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00332 f30a287129385242fedf0720e78a59ba 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 7.1E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00332 f30a287129385242fedf0720e78a59ba 298 Gene3D G3DSA:3.40.190.290 99 287 1.8E-9 T 13-10-2018 VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 SUPERFAMILY SSF53807 40 301 6.28E-51 T 13-10-2018 VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 Gene3D G3DSA:3.40.50.1980 131 303 2.1E-46 T 13-10-2018 VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 Pfam PF01497 Periplasmic binding protein 45 228 7.8E-19 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 62 80 3.7E-7 T 13-10-2018 VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 93 108 3.7E-7 T 13-10-2018 VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 282 295 3.7E-7 T 13-10-2018 VAA_02425 cbf3d8302b3f727120b3b1bd061785f8 308 Gene3D G3DSA:3.40.50.1980 28 128 5.6E-30 T 13-10-2018 VAA_01992 d2427d036f3c9966ae6b73dbe7012980 377 Pfam PF17186 Lipocalin-like domain 255 375 2.2E-23 T 13-10-2018 VAA_01992 d2427d036f3c9966ae6b73dbe7012980 377 SUPERFAMILY SSF159245 57 375 7.06E-77 T 13-10-2018 VAA_01992 d2427d036f3c9966ae6b73dbe7012980 377 Gene3D G3DSA:2.40.370.10 256 377 3.1E-12 T 13-10-2018 IPR023374 AttH-like domain superfamily VAA_01992 d2427d036f3c9966ae6b73dbe7012980 377 Pfam PF07143 CrtC N-terminal lipocalin domain 80 251 8.8E-42 T 13-10-2018 IPR010791 AttH domain VAA_01992 d2427d036f3c9966ae6b73dbe7012980 377 Gene3D G3DSA:2.40.370.10 68 254 1.2E-48 T 13-10-2018 IPR023374 AttH-like domain superfamily VAA_02866 d1558b5734aa555330aa63f2700affa1 628 Pfam PF00672 HAMP domain 300 347 7.0E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 Gene3D G3DSA:3.30.450.20 66 171 1.9E-27 T 13-10-2018 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 Pfam PF02743 Cache domain 42 259 8.6E-27 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 SUPERFAMILY SSF58104 318 627 6.54E-78 T 13-10-2018 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 Gene3D G3DSA:1.10.287.950 296 628 1.6E-74 T 13-10-2018 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 594 9.1E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 SMART SM00283 365 626 8.4E-79 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 2.5E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 2.5E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 2.5E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 Gene3D G3DSA:3.30.450.20 53 270 1.9E-27 T 13-10-2018 VAA_02866 d1558b5734aa555330aa63f2700affa1 628 SMART SM00304 296 350 2.6E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 29 47 9.2E-16 T 13-10-2018 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 206 228 9.2E-16 T 13-10-2018 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 195 9.2E-16 T 13-10-2018 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 76 94 9.2E-16 T 13-10-2018 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 273 374 5.4E-16 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 Pfam PF00581 Rhodanese-like domain 409 485 6.1E-9 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 SUPERFAMILY SSF51905 32 261 6.13E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 Gene3D G3DSA:3.50.50.60 2 284 2.7E-150 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 Gene3D G3DSA:3.40.250.10 394 486 7.5E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 251 8.5E-43 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 Gene3D G3DSA:3.50.50.60 38 384 2.7E-150 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 SUPERFAMILY SSF55424 267 390 1.2E-34 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 SUPERFAMILY SSF52821 381 485 1.17E-22 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01589 d9c5fd1883a0af6e979a3fe54c97b308 490 SMART SM00450 396 490 2.5E-12 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_02987 bbd8f8da96ca0741045c9f880418a12e 401 Pfam PF07690 Major Facilitator Superfamily 15 354 8.0E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_02987 bbd8f8da96ca0741045c9f880418a12e 401 Gene3D G3DSA:1.20.1720.10 10 386 1.4E-96 T 13-10-2018 VAA_02987 bbd8f8da96ca0741045c9f880418a12e 401 SUPERFAMILY SSF103473 8 387 6.02E-56 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01910 a27b2d4072656dc575ab3e07543fd036 99 SUPERFAMILY SSF52091 7 98 2.94E-17 T 13-10-2018 IPR036513 STAS domain superfamily VAA_01910 a27b2d4072656dc575ab3e07543fd036 99 Gene3D G3DSA:3.30.750.24 2 99 2.9E-15 T 13-10-2018 IPR036513 STAS domain superfamily VAA_01910 a27b2d4072656dc575ab3e07543fd036 99 Pfam PF13466 STAS domain 38 92 7.1E-8 T 13-10-2018 IPR002645 STAS domain VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 SUPERFAMILY SSF48173 192 468 3.79E-108 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 Gene3D G3DSA:1.25.40.80 133 284 1.2E-75 T 13-10-2018 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 Gene3D G3DSA:3.40.50.620 3 202 1.2E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 Gene3D G3DSA:1.10.579.10 291 470 1.0E-82 T 13-10-2018 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 PRINTS PR00147 DNA photolyase signature 142 158 4.6E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 PRINTS PR00147 DNA photolyase signature 382 396 4.6E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 PRINTS PR00147 DNA photolyase signature 343 361 4.6E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 PRINTS PR00147 DNA photolyase signature 323 339 4.6E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 2.8E-84 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 Pfam PF00875 DNA photolyase 3 165 1.1E-44 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 SUPERFAMILY SSF52425 3 176 6.67E-49 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VAA_02916 2214c7dd0c7f11141cf55f9c5b6428c6 470 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VAA_01615 31824e1cb92847decd18fe11e6192a88 208 SUPERFAMILY SSF52833 42 205 4.23E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_01615 31824e1cb92847decd18fe11e6192a88 208 Gene3D G3DSA:3.40.30.10 24 207 7.3E-36 T 13-10-2018 VAA_01615 31824e1cb92847decd18fe11e6192a88 208 Pfam PF13462 Thioredoxin 48 197 4.1E-5 T 13-10-2018 IPR012336 Thioredoxin-like fold VAA_01615 31824e1cb92847decd18fe11e6192a88 208 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAA_01195 219e7b0a6830e8d798e94cc2d42f015d 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 39 124 4.9E-16 T 13-10-2018 IPR031982 Type IV minor pilin ComP VAA_01195 219e7b0a6830e8d798e94cc2d42f015d 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 2.8E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01195 219e7b0a6830e8d798e94cc2d42f015d 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 1.6E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01195 219e7b0a6830e8d798e94cc2d42f015d 144 SUPERFAMILY SSF54523 18 124 3.71E-18 T 13-10-2018 VAA_01195 219e7b0a6830e8d798e94cc2d42f015d 144 Gene3D G3DSA:3.30.700.10 19 144 3.8E-20 T 13-10-2018 VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Gene3D G3DSA:3.40.50.11040 5 169 1.6E-17 T 13-10-2018 VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 SUPERFAMILY SSF52540 149 278 4.39E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 SUPERFAMILY SSF55729 375 526 8.62E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Gene3D G3DSA:3.40.50.12320 175 333 9.0E-47 T 13-10-2018 VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Gene3D G3DSA:3.40.630.30 343 541 6.2E-63 T 13-10-2018 VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Pfam PF13718 GNAT acetyltransferase 2 380 490 2.2E-16 T 13-10-2018 IPR000182 GNAT domain VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Pfam PF13718 GNAT acetyltransferase 2 496 542 6.9E-10 T 13-10-2018 IPR000182 GNAT domain VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 678 40.78 T 13-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VAA_01899 035437f04e9e9163d09f4559ebc6fad7 687 Pfam PF05127 Helicase 177 342 1.4E-56 T 13-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VAA_01053 03264acd93f9022e6ce058da34cda3b2 151 PIRSF PIRSF006105 1 151 1.9E-47 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VAA_01053 03264acd93f9022e6ce058da34cda3b2 151 Gene3D G3DSA:1.10.1130.10 65 132 2.2E-29 T 13-10-2018 VAA_01053 03264acd93f9022e6ce058da34cda3b2 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 1.2E-49 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VAA_01053 03264acd93f9022e6ce058da34cda3b2 151 SUPERFAMILY SSF48695 36 149 3.19E-40 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VAA_03339 e21dd33b1e82fcca0e41e1128eb409a5 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 333 32.923 T 13-10-2018 IPR003770 Endolytic murein transglycosylase VAA_03339 e21dd33b1e82fcca0e41e1128eb409a5 338 Pfam PF02618 YceG-like family 43 328 3.3E-81 T 13-10-2018 IPR003770 Endolytic murein transglycosylase VAA_03339 e21dd33b1e82fcca0e41e1128eb409a5 338 Gene3D G3DSA:3.30.160.60 302 338 3.8E-18 T 13-10-2018 VAA_03339 e21dd33b1e82fcca0e41e1128eb409a5 338 Gene3D G3DSA:1.10.8.1150 39 110 4.2E-8 T 13-10-2018 VAA_03339 e21dd33b1e82fcca0e41e1128eb409a5 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 335 3.6E-95 T 13-10-2018 IPR003770 Endolytic murein transglycosylase VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 13-10-2018 IPR010916 TonB box, conserved site VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 Gene3D G3DSA:2.40.170.20 153 609 3.5E-96 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 Pfam PF00593 TonB dependent receptor 210 607 3.6E-37 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 146 3.8E-30 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 SUPERFAMILY SSF56935 29 609 1.47E-105 T 13-10-2018 VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 Gene3D G3DSA:2.170.130.10 27 151 5.4E-38 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAA_00488 a1f41f53567c004673a5bb71ed2dbc7e 609 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 609 33.788 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VAA_00169 1f17061fb6230cda0fb4a3c5e3fe42b3 257 Pfam PF01636 Phosphotransferase enzyme family 92 163 2.0E-10 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VAA_00169 1f17061fb6230cda0fb4a3c5e3fe42b3 257 SUPERFAMILY SSF56112 2 213 7.82E-26 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_00169 1f17061fb6230cda0fb4a3c5e3fe42b3 257 Gene3D G3DSA:3.90.1200.10 112 245 4.6E-11 T 13-10-2018 VAA_02805 9cfa61c2572e5d76460a8cc1b916a9dc 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 6.0E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_02805 9cfa61c2572e5d76460a8cc1b916a9dc 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 6.0E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_02805 9cfa61c2572e5d76460a8cc1b916a9dc 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 6.0E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VAA_02805 9cfa61c2572e5d76460a8cc1b916a9dc 365 Pfam PF12698 ABC-2 family transporter protein 24 356 3.2E-45 T 13-10-2018 VAA_02533 25f3be3197ea951fca09b9e92039775b 229 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 5.9E-60 T 13-10-2018 IPR010858 Protein of unknown function DUF1481 VAA_02533 25f3be3197ea951fca09b9e92039775b 229 PIRSF PIRSF028160 1 229 4.0E-100 T 13-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VAA_01840 5de0319e6f70e2cff3e4f8f52e2d2815 315 SUPERFAMILY SSF52402 4 159 1.59E-26 T 13-10-2018 VAA_01840 5de0319e6f70e2cff3e4f8f52e2d2815 315 Gene3D G3DSA:3.40.50.12370 1 312 4.9E-111 T 13-10-2018 VAA_01840 5de0319e6f70e2cff3e4f8f52e2d2815 315 Pfam PF00582 Universal stress protein family 4 148 2.7E-13 T 13-10-2018 IPR006016 UspA VAA_01840 5de0319e6f70e2cff3e4f8f52e2d2815 315 Pfam PF00582 Universal stress protein family 226 301 2.4E-14 T 13-10-2018 IPR006016 UspA VAA_01840 5de0319e6f70e2cff3e4f8f52e2d2815 315 SUPERFAMILY SSF52402 173 309 6.03E-22 T 13-10-2018 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 SUPERFAMILY SSF48452 443 805 1.05E-155 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 Gene3D G3DSA:1.25.40.10 440 811 4.3E-81 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 SUPERFAMILY SSF52540 18 227 1.78E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 7.8E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 SMART SM00421 836 893 5.8E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 Gene3D G3DSA:3.40.50.300 10 165 4.3E-7 T 13-10-2018 VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.915 T 13-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT VAA_01938 1b6ce7fa9c5334460db4ee44b5e5568f 902 Gene3D G3DSA:1.10.10.10 829 900 4.7E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00892 44aa5ad015557d8bbd3b11e95048b0aa 309 SUPERFAMILY SSF52768 12 302 3.78E-95 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VAA_00892 44aa5ad015557d8bbd3b11e95048b0aa 309 PIRSF PIRSF036979 11 305 5.7E-96 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_00892 44aa5ad015557d8bbd3b11e95048b0aa 309 TIGRFAM TIGR01230 agmatinase: agmatinase 26 299 1.3E-91 T 13-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VAA_00892 44aa5ad015557d8bbd3b11e95048b0aa 309 Gene3D G3DSA:3.40.800.10 1 307 2.5E-105 T 13-10-2018 VAA_00892 44aa5ad015557d8bbd3b11e95048b0aa 309 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VAA_00892 44aa5ad015557d8bbd3b11e95048b0aa 309 Pfam PF00491 Arginase family 33 297 7.8E-89 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 SUPERFAMILY SSF100950 78 237 1.34E-31 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 Gene3D G3DSA:1.10.10.10 1 54 1.5E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 SMART SM00420 6 58 4.3E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 SUPERFAMILY SSF46785 3 57 2.59E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 Pfam PF00455 DeoR C terminal sensor domain 78 236 3.1E-48 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.7E-14 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_01032 648b44ee5419bbc238fe2556506e9d01 258 SMART SM01134 76 237 1.6E-64 T 13-10-2018 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 Gene3D G3DSA:2.40.50.100 73 151 2.0E-30 T 13-10-2018 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 SUPERFAMILY SSF51230 76 151 2.49E-25 T 13-10-2018 IPR011053 Single hybrid motif VAA_02545 130151b1ab6994f99d5249beafc52e37 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 1.4E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 1.4E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 1.4E-18 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 2.1E-60 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VAA_02545 130151b1ab6994f99d5249beafc52e37 151 Pfam PF00364 Biotin-requiring enzyme 76 150 1.2E-23 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_01083 2407c23308319eb9e3bf27affcd89552 99 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 15 95 7.2E-27 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01083 2407c23308319eb9e3bf27affcd89552 99 SUPERFAMILY SSF55594 15 96 1.57E-25 T 13-10-2018 IPR035895 HPr-like superfamily VAA_01083 2407c23308319eb9e3bf27affcd89552 99 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 53 68 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VAA_01083 2407c23308319eb9e3bf27affcd89552 99 Gene3D G3DSA:3.30.1340.10 15 99 3.0E-31 T 13-10-2018 IPR035895 HPr-like superfamily VAA_01083 2407c23308319eb9e3bf27affcd89552 99 Pfam PF00381 PTS HPr component phosphorylation site 17 96 3.3E-26 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01083 2407c23308319eb9e3bf27affcd89552 99 PRINTS PR00107 Phosphocarrier protein signature 67 84 1.7E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01083 2407c23308319eb9e3bf27affcd89552 99 PRINTS PR00107 Phosphocarrier protein signature 27 43 1.7E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01083 2407c23308319eb9e3bf27affcd89552 99 PRINTS PR00107 Phosphocarrier protein signature 52 67 1.7E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VAA_01083 2407c23308319eb9e3bf27affcd89552 99 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 27 34 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 Gene3D G3DSA:1.20.1480.50 174 266 6.4E-9 T 13-10-2018 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 Gene3D G3DSA:1.10.287.130 267 364 4.4E-19 T 13-10-2018 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 SMART SM00388 299 366 3.2E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 SUPERFAMILY SSF158472 214 264 7.59E-9 T 13-10-2018 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 Pfam PF00672 HAMP domain 214 262 2.7E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 Gene3D G3DSA:3.30.565.10 372 531 9.9E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 527 7.7E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 SUPERFAMILY SSF47384 284 364 1.47E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 8.8E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 8.8E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 8.8E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 8.8E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 364 9.3E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 SMART SM00304 214 266 3.4E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 SUPERFAMILY SSF55874 355 524 4.85E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03285 286fab81ac6a4d4a1b44e1949ff348d4 531 SMART SM00387 416 528 2.8E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02181 e45a0897fe47fc9d8b9bacf8abbaddf8 83 Gene3D G3DSA:1.10.1900.30 9 76 7.2E-33 T 13-10-2018 IPR038191 YciN superfamily VAA_02181 e45a0897fe47fc9d8b9bacf8abbaddf8 83 Pfam PF10692 Protein of unknown function (DUF2498) 3 80 6.9E-40 T 13-10-2018 IPR019633 Protein of unknown function DUF2498 VAA_00789 2de2b1efb944302693fec32cc7207578 430 SUPERFAMILY SSF51261 144 390 5.75E-72 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_00789 2de2b1efb944302693fec32cc7207578 430 Gene3D G3DSA:3.10.450.350 173 408 1.5E-79 T 13-10-2018 VAA_00789 2de2b1efb944302693fec32cc7207578 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 2.8E-5 T 13-10-2018 IPR013731 Opacity-associated protein A, N-terminal VAA_00789 2de2b1efb944302693fec32cc7207578 430 Gene3D G3DSA:2.70.70.10 266 395 1.5E-79 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_00789 2de2b1efb944302693fec32cc7207578 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 134 6.0E-5 T 13-10-2018 IPR007340 Opacity-associated protein A VAA_00789 2de2b1efb944302693fec32cc7207578 430 Gene3D G3DSA:3.10.450.350 67 160 5.5E-10 T 13-10-2018 VAA_00789 2de2b1efb944302693fec32cc7207578 430 Pfam PF01551 Peptidase family M23 295 389 2.2E-31 T 13-10-2018 IPR016047 Peptidase M23 VAA_01756 8ed5568871fdf3da4163b7edc063274b 182 Gene3D G3DSA:2.160.10.10 3 182 6.9E-55 T 13-10-2018 VAA_01756 8ed5568871fdf3da4163b7edc063274b 182 SUPERFAMILY SSF51161 4 174 1.8E-44 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_01756 8ed5568871fdf3da4163b7edc063274b 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_01756 8ed5568871fdf3da4163b7edc063274b 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 8.5E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_01735 164ac8706ab523a485f62b343cb7221a 214 Pfam PF04612 Type II secretion system (T2SS), protein M 11 70 2.3E-7 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VAA_03686 bcd452e043daa9f98a650685b1c52eec 184 TIGRFAM TIGR01935 NOT-MenG: RraA family 28 176 6.4E-68 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VAA_03686 bcd452e043daa9f98a650685b1c52eec 184 SUPERFAMILY SSF89562 28 181 8.11E-48 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VAA_03686 bcd452e043daa9f98a650685b1c52eec 184 Gene3D G3DSA:3.50.30.40 22 184 1.2E-65 T 13-10-2018 VAA_03686 bcd452e043daa9f98a650685b1c52eec 184 Pfam PF03737 Aldolase/RraA 28 175 2.1E-43 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VAA_01922 e155879a23dec3a6b5021be8ff92378a 274 Pfam PF12833 Helix-turn-helix domain 192 270 1.9E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_01922 e155879a23dec3a6b5021be8ff92378a 274 SUPERFAMILY SSF46689 223 271 2.15E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01922 e155879a23dec3a6b5021be8ff92378a 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_01922 e155879a23dec3a6b5021be8ff92378a 274 Gene3D G3DSA:1.10.10.60 171 273 2.6E-26 T 13-10-2018 VAA_01922 e155879a23dec3a6b5021be8ff92378a 274 SUPERFAMILY SSF46689 173 219 1.48E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01922 e155879a23dec3a6b5021be8ff92378a 274 SMART SM00342 186 269 1.2E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 SUPERFAMILY SSF53223 26 147 3.64E-39 T 13-10-2018 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 Gene3D G3DSA:3.40.50.10860 33 301 8.8E-106 T 13-10-2018 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 285 293 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 149 306 1.3E-67 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 280 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 229 258 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 100 127 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 59 81 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 281 299 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 180 200 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 135 156 2.1E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 101 126 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 Hamap MF_01576 Bifunctional protein FolD [folD]. 28 308 37.502 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 SUPERFAMILY SSF51735 148 307 1.11E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 31 146 2.9E-38 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VAA_02320 b02cdac796e2b27f6eb8fa6e0a16f6cf 311 Gene3D G3DSA:3.40.50.720 31 284 8.8E-106 T 13-10-2018 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 SUPERFAMILY SSF141734 14 124 6.15E-47 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 SUPERFAMILY SSF101386 123 210 9.81E-25 T 13-10-2018 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-22 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 3.9E-33 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 7.2E-18 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 38.097 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 Gene3D G3DSA:3.10.20.400 4 102 1.1E-37 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 2.5E-31 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 Gene3D G3DSA:1.10.287.1080 120 211 3.0E-29 T 13-10-2018 VAA_02192 13a293981dcb88234d9090c5a01f4894 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.619 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VAA_00630 2310628e5d3e4886840b2c56d4545b90 252 Gene3D G3DSA:3.40.50.150 5 173 3.2E-39 T 13-10-2018 VAA_00630 2310628e5d3e4886840b2c56d4545b90 252 SUPERFAMILY SSF53335 24 105 5.23E-9 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00630 2310628e5d3e4886840b2c56d4545b90 252 Pfam PF12847 Methyltransferase domain 11 167 4.1E-20 T 13-10-2018 VAA_00630 2310628e5d3e4886840b2c56d4545b90 252 PIRSF PIRSF028234 8 245 2.8E-106 T 13-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 VAA_00296 1c88b52d81ea5ae6265ac3125fb7a3c1 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.8E-31 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VAA_00296 1c88b52d81ea5ae6265ac3125fb7a3c1 172 SUPERFAMILY SSF141452 3 169 1.57E-37 T 13-10-2018 IPR036624 Hcp1-like superfamily VAA_00296 1c88b52d81ea5ae6265ac3125fb7a3c1 172 Gene3D G3DSA:2.30.110.20 2 172 2.2E-65 T 13-10-2018 IPR036624 Hcp1-like superfamily VAA_00296 1c88b52d81ea5ae6265ac3125fb7a3c1 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 6.1E-63 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 Gene3D G3DSA:3.20.20.10 15 242 2.1E-141 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 SUPERFAMILY SSF50621 212 357 5.23E-22 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 PIRSF PIRSF038941 1 372 2.4E-128 T 13-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 Gene3D G3DSA:2.40.37.10 7 372 2.1E-141 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 8.1E-163 T 13-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 SUPERFAMILY SSF51419 14 243 2.83E-41 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01988 2761191b7bf672fc0da0e6dd28c52c46 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 244 327 2.5E-4 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SMART SM01211 1061 1316 2.0E-156 T 13-10-2018 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 22 1315 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF109736 174 240 2.35E-20 T 13-10-2018 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Gene3D G3DSA:3.90.650.10 829 1002 2.9E-30 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF55326 638 836 9.94E-70 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Gene3D G3DSA:3.30.1330.10 634 828 8.5E-26 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 20 1317 21.228 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Pfam PF02769 AIR synthase related protein, C-terminal domain 854 989 6.3E-14 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Pfam PF02769 AIR synthase related protein, C-terminal domain 452 609 3.0E-27 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF82697 19 169 2.25E-50 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Gene3D G3DSA:3.30.1330.10 234 439 1.3E-40 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Gene3D G3DSA:3.40.50.880 1003 1317 9.0E-139 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Gene3D G3DSA:1.10.8.750 172 233 2.1E-26 T 13-10-2018 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF55326 241 448 2.41E-64 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF52317 1057 1315 1.91E-98 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF56042 452 635 7.03E-53 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1061 1314 3.0E-105 T 13-10-2018 VAA_01182 01419508eda4f73e517a6961e71228c0 1317 SUPERFAMILY SSF56042 845 1055 2.39E-52 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_01182 01419508eda4f73e517a6961e71228c0 1317 Gene3D G3DSA:3.90.650.10 440 626 3.9E-59 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 SUPERFAMILY SSF46689 150 194 6.0E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 Gene3D G3DSA:3.40.50.1390 13 137 1.3E-49 T 13-10-2018 VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 SUPERFAMILY SSF53041 13 147 4.71E-46 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 ProSitePatterns PS00398 Site-specific recombinases signature 2. 67 79 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 SMART SM00857 14 148 1.1E-61 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 Pfam PF00239 Resolvase, N terminal domain 15 147 3.8E-46 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAA_00474 bbcda939d118edbddf3dfac03bd38659 205 ProSitePatterns PS00397 Site-specific recombinases active site. 17 25 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VAA_00554 177588ae47da42adb68fd0156d01e23a 175 Pfam PF00210 Ferritin-like domain 8 143 7.9E-39 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VAA_00554 177588ae47da42adb68fd0156d01e23a 175 Gene3D G3DSA:1.20.1260.10 1 175 1.4E-52 T 13-10-2018 IPR012347 Ferritin-like VAA_00554 177588ae47da42adb68fd0156d01e23a 175 SUPERFAMILY SSF47240 1 159 1.72E-58 T 13-10-2018 IPR009078 Ferritin-like superfamily VAA_02004 46b7943d95c402e28cd229b43266e54b 104 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 13 104 26.314 T 13-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VAA_02004 46b7943d95c402e28cd229b43266e54b 104 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 13 104 1.0E-43 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VAA_02004 46b7943d95c402e28cd229b43266e54b 104 SUPERFAMILY SSF50715 13 104 9.07E-29 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02004 46b7943d95c402e28cd229b43266e54b 104 Pfam PF01386 Ribosomal L25p family 16 101 1.8E-23 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VAA_02004 46b7943d95c402e28cd229b43266e54b 104 Gene3D G3DSA:2.40.240.10 10 104 4.3E-35 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 SUPERFAMILY SSF56784 500 782 1.4E-48 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Gene3D G3DSA:3.40.50.1000 482 720 1.1E-65 T 13-10-2018 IPR023214 HAD superfamily VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 3.4E-154 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 2.2E-29 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Pfam PF00403 Heavy-metal-associated domain 93 154 1.1E-9 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Gene3D G3DSA:3.30.70.100 83 156 1.4E-14 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 8.1E-25 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 8.1E-25 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 8.1E-25 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 8.1E-25 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 8.1E-25 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 8.4E-73 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.2E-7 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 1.2E-7 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.2E-7 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.2E-7 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Pfam PF00122 E1-E2 ATPase 318 478 3.8E-44 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.4E-26 T 13-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Gene3D G3DSA:2.70.150.20 291 407 6.0E-31 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 SUPERFAMILY SSF81665 250 764 4.58E-11 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 SUPERFAMILY SSF81653 318 402 1.83E-22 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 SUPERFAMILY SSF55008 85 161 2.09E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 786 1.2E-121 T 13-10-2018 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 Gene3D G3DSA:3.40.1110.10 511 615 1.1E-65 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VAA_01845 157005ed6293b5e4e0bce394ca282d9a 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 5.1E-161 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 SUPERFAMILY SSF82866 289 491 2.75E-40 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 SUPERFAMILY SSF82693 41 133 2.62E-23 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:1.20.1640.10 501 1018 3.7E-258 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 SUPERFAMILY SSF82866 788 1023 1.83E-49 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:1.20.1640.10 12 500 3.7E-258 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:3.30.70.1440 654 851 3.7E-258 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:3.30.70.1430 41 801 3.7E-258 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:3.30.70.1320 135 325 3.7E-258 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.4E-30 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 SUPERFAMILY SSF82714 706 788 3.92E-5 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Pfam PF00873 AcrB/AcrD/AcrF family 5 1021 2.3E-175 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:3.30.70.1430 567 653 3.7E-258 T 13-10-2018 VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:3.30.2090.10 179 270 3.7E-258 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 SUPERFAMILY SSF82714 184 263 4.58E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 Gene3D G3DSA:3.30.2090.10 705 793 3.7E-258 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_00788 6faa4da5475e36f49c7ad5f5f99f245a 1032 SUPERFAMILY SSF82693 141 325 3.92E-12 T 13-10-2018 VAA_02969 df82da986614dbd04b3b41a3b24f6abd 137 SUPERFAMILY SSF82784 1 130 5.89E-37 T 13-10-2018 IPR036102 OsmC/Ohr superfamily VAA_02969 df82da986614dbd04b3b41a3b24f6abd 137 Gene3D G3DSA:2.20.25.10 1 34 4.9E-19 T 13-10-2018 VAA_02969 df82da986614dbd04b3b41a3b24f6abd 137 Pfam PF02566 OsmC-like protein 29 127 1.6E-14 T 13-10-2018 IPR003718 OsmC/Ohr family VAA_02969 df82da986614dbd04b3b41a3b24f6abd 137 Gene3D G3DSA:3.30.300.20 35 132 8.2E-23 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_02499 ee93238e49f3f1961820f12db8dfe835 151 Gene3D G3DSA:2.160.10.10 3 151 6.0E-51 T 13-10-2018 VAA_02499 ee93238e49f3f1961820f12db8dfe835 151 SUPERFAMILY SSF51161 14 151 1.96E-43 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_02499 ee93238e49f3f1961820f12db8dfe835 151 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAA_02499 ee93238e49f3f1961820f12db8dfe835 151 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.0E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02499 ee93238e49f3f1961820f12db8dfe835 151 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 133 8.6E-9 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02499 ee93238e49f3f1961820f12db8dfe835 151 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 48 82 1.0E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03611 b385c9a47768731754b89d32616c18ab 407 Gene3D G3DSA:2.40.30.10 126 264 1.1E-51 T 13-10-2018 VAA_03611 b385c9a47768731754b89d32616c18ab 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 6.5E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAA_03611 b385c9a47768731754b89d32616c18ab 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.516 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VAA_03611 b385c9a47768731754b89d32616c18ab 407 SUPERFAMILY SSF63380 105 272 6.47E-35 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_03611 b385c9a47768731754b89d32616c18ab 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 3.9E-228 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VAA_03611 b385c9a47768731754b89d32616c18ab 407 SUPERFAMILY SSF52343 258 402 1.96E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_03611 b385c9a47768731754b89d32616c18ab 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.2E-16 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAA_03611 b385c9a47768731754b89d32616c18ab 407 PIRSF PIRSF000044 1 407 4.9E-218 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VAA_03611 b385c9a47768731754b89d32616c18ab 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 6.7E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAA_03611 b385c9a47768731754b89d32616c18ab 407 Gene3D G3DSA:3.40.50.80 275 393 5.2E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_03611 b385c9a47768731754b89d32616c18ab 407 SUPERFAMILY SSF54292 36 124 2.0E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_03611 b385c9a47768731754b89d32616c18ab 407 Gene3D G3DSA:3.10.20.30 34 125 3.4E-32 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_02196 d19c96662d73fb8c98375e39384b8415 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.2E-27 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 5.3E-79 T 13-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Gene3D G3DSA:3.30.230.40 257 357 5.4E-37 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 1.2E-46 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 SUPERFAMILY SSF54211 254 344 3.92E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02196 d19c96662d73fb8c98375e39384b8415 357 SUPERFAMILY SSF54211 169 253 1.26E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.179 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Gene3D G3DSA:3.40.50.1000 1 164 1.5E-45 T 13-10-2018 IPR023214 HAD superfamily VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 1.4E-5 T 13-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.5E-66 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 SUPERFAMILY SSF56784 3 157 7.89E-40 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02196 d19c96662d73fb8c98375e39384b8415 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.217 T 13-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VAA_02196 d19c96662d73fb8c98375e39384b8415 357 Gene3D G3DSA:3.30.230.40 165 256 4.1E-37 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VAA_00509 d13a99c5dc658921ad177a0ba8fded9f 314 Pfam PF13413 Helix-turn-helix domain 29 86 6.6E-18 T 13-10-2018 VAA_00509 d13a99c5dc658921ad177a0ba8fded9f 314 Pfam PF13464 Domain of unknown function (DUF4115) 240 313 1.2E-24 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 VAA_00509 d13a99c5dc658921ad177a0ba8fded9f 314 SUPERFAMILY SSF47413 24 95 1.61E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00509 d13a99c5dc658921ad177a0ba8fded9f 314 Gene3D G3DSA:1.10.260.40 14 124 1.1E-23 T 13-10-2018 VAA_01092 eb1ef8d84123ae8c3441b0775fbb0cab 157 Pfam PF07295 Zinc-ribbon containing domain 16 154 1.2E-48 T 13-10-2018 IPR009912 Zinc-ribbon containing domain VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 Gene3D G3DSA:3.40.190.10 41 287 4.4E-122 T 13-10-2018 VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 102 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 Gene3D G3DSA:3.10.105.10 288 503 4.4E-122 T 13-10-2018 VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 PIRSF PIRSF002741 25 511 1.0E-94 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 434 2.5E-83 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 SUPERFAMILY SSF53850 34 523 6.15E-127 T 13-10-2018 VAA_00595 b4210263249ea20d0bf2f71cfa9fd24e 527 Gene3D G3DSA:3.90.76.10 66 174 4.4E-122 T 13-10-2018 VAA_02114 316afe5cb631200400b3acbddf4f1ef3 201 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 17 178 7.7E-31 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VAA_02114 316afe5cb631200400b3acbddf4f1ef3 201 SUPERFAMILY SSF56300 15 178 3.04E-39 T 13-10-2018 VAA_02114 316afe5cb631200400b3acbddf4f1ef3 201 Gene3D G3DSA:3.60.21.10 16 198 4.7E-62 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_02114 316afe5cb631200400b3acbddf4f1ef3 201 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 137 161 - T 13-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site VAA_02114 316afe5cb631200400b3acbddf4f1ef3 201 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 17 177 2.9E-26 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.2E-10 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 2.2E-10 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.2E-10 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.2E-10 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 621 5.0E-10 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_01525 e42166c74a75cebb021569c328a85033 862 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VAA_01525 e42166c74a75cebb021569c328a85033 862 Gene3D G3DSA:3.30.413.10 600 790 8.2E-31 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 Gene3D G3DSA:3.50.50.60 110 246 9.0E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01525 e42166c74a75cebb021569c328a85033 862 SUPERFAMILY SSF56014 633 809 2.36E-47 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_01525 e42166c74a75cebb021569c328a85033 862 Gene3D G3DSA:1.10.10.1100 423 477 4.4E-12 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PIRSF PIRSF037149 1 835 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VAA_01525 e42166c74a75cebb021569c328a85033 862 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 2.2E-51 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_01525 e42166c74a75cebb021569c328a85033 862 SUPERFAMILY SSF55124 502 627 1.64E-28 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_01525 e42166c74a75cebb021569c328a85033 862 SUPERFAMILY SSF51905 2 183 5.26E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01525 e42166c74a75cebb021569c328a85033 862 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 2.0E-13 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VAA_01525 e42166c74a75cebb021569c328a85033 862 SUPERFAMILY SSF51905 144 310 4.35E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01525 e42166c74a75cebb021569c328a85033 862 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 770 2.3E-14 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 5.0E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 5.0E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.5E-16 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.5E-16 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.5E-16 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 3.5E-16 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 3.5E-16 T 13-10-2018 VAA_01525 e42166c74a75cebb021569c328a85033 862 Gene3D G3DSA:3.50.50.60 7 283 9.0E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 Pfam PF07743 HSCB C-terminal oligomerisation domain 99 175 4.1E-17 T 13-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 Gene3D G3DSA:1.10.287.110 13 91 6.0E-23 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 13 182 25.383 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 Gene3D G3DSA:1.20.1280.20 92 183 3.3E-26 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 SUPERFAMILY SSF47144 90 182 8.11E-24 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 25 181 1.7E-42 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 SUPERFAMILY SSF46565 13 85 5.76E-16 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_00516 ecfa7b175094b2ac107516c077ff6dc2 183 SMART SM00271 13 78 2.3E-7 T 13-10-2018 IPR001623 DnaJ domain VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 PRINTS PR00160 Glutaredoxin signature 76 89 2.0E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 PRINTS PR00160 Glutaredoxin signature 62 75 2.0E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 PRINTS PR00160 Glutaredoxin signature 13 31 2.0E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 Pfam PF00462 Glutaredoxin 13 79 1.6E-16 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 SUPERFAMILY SSF52833 13 91 4.46E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 12 95 2.1E-48 T 13-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VAA_02221 73d9c47761f5a83837d8054f21f91f67 98 Gene3D G3DSA:3.40.30.10 11 94 2.3E-25 T 13-10-2018 VAA_00908 4f825ab750bab2b818c1aa8d4de4e5d0 291 SUPERFAMILY SSF52402 16 290 1.05E-77 T 13-10-2018 VAA_00908 4f825ab750bab2b818c1aa8d4de4e5d0 291 Gene3D G3DSA:3.40.50.620 14 291 3.4E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00908 4f825ab750bab2b818c1aa8d4de4e5d0 291 TIGRFAM TIGR00552 nadE: NAD+ synthetase 30 287 4.0E-63 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VAA_00908 4f825ab750bab2b818c1aa8d4de4e5d0 291 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 31 289 44.582 T 13-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VAA_00908 4f825ab750bab2b818c1aa8d4de4e5d0 291 Pfam PF02540 NAD synthase 36 285 4.7E-62 T 13-10-2018 IPR022310 NAD/GMP synthase VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.2E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-18 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 4.4E-43 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 SUPERFAMILY SSF110324 2 80 1.46E-34 T 13-10-2018 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.422 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01681 da0cf5d8fe006f932076377a3ebebca8 85 Gene3D G3DSA:2.40.50.100 21 85 2.8E-31 T 13-10-2018 VAA_00481 d5b8e964f800a6704dd24e6b3e080340 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 17 111 1.2E-18 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_00481 d5b8e964f800a6704dd24e6b3e080340 439 Pfam PF07804 HipA-like C-terminal domain 153 402 1.1E-48 T 13-10-2018 IPR012893 HipA-like, C-terminal VAA_00481 d5b8e964f800a6704dd24e6b3e080340 439 Pfam PF13657 HipA N-terminal domain 17 111 3.5E-14 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 Pfam PF07650 KH domain 231 308 4.4E-21 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 Pfam PF01926 50S ribosome-binding GTPase 33 147 1.2E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 SUPERFAMILY SSF52540 33 228 6.11E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 SUPERFAMILY SSF54814 204 320 4.25E-41 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 192 3.0E-38 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 Gene3D G3DSA:3.40.50.300 25 206 9.5E-51 T 13-10-2018 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 Gene3D G3DSA:3.30.300.20 208 322 2.5E-42 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 Hamap MF_00367 GTPase Era [era]. 28 320 35.763 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03774 ec9189c0994f0acece2f8d7da7c411df 324 TIGRFAM TIGR00436 era: GTP-binding protein Era 31 303 6.3E-110 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02757 5c20108cbd1274945bb78cf895b5a3d2 183 Gene3D G3DSA:3.90.1520.10 1 183 3.2E-61 T 13-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VAA_02757 5c20108cbd1274945bb78cf895b5a3d2 183 Pfam PF07700 Haem-NO-binding 3 161 1.4E-37 T 13-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VAA_02757 5c20108cbd1274945bb78cf895b5a3d2 183 SUPERFAMILY SSF111126 1 181 2.07E-50 T 13-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VAA_02757 5c20108cbd1274945bb78cf895b5a3d2 183 SMART SM00989 118 178 7.3E-6 T 13-10-2018 IPR004096 4-vinyl reductase, 4VR VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 SMART SM01003 4 143 1.0E-69 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 SUPERFAMILY SSF51735 143 320 7.81E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 SUPERFAMILY SSF52283 1 174 5.78E-53 T 13-10-2018 VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 5.3E-73 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 13-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 515 2.0E-269 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 432 515 1.6E-36 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 2.2E-46 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 Gene3D G3DSA:3.40.50.720 143 324 2.1E-156 T 13-10-2018 VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 Gene3D G3DSA:3.40.50.720 3 371 2.1E-156 T 13-10-2018 VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 SMART SM01002 152 317 1.5E-79 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VAA_04291 334fa594e9d921f4de53b0bc39ce7398 516 PIRSF PIRSF000203 1 515 1.1E-265 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 67 82 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Pfam PF03143 Elongation factor Tu C-terminal domain 314 408 5.0E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 29 164 1.9E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 17 409 2.8E-230 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 SUPERFAMILY SSF50465 314 409 3.45E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Gene3D G3DSA:2.40.30.10 354 409 1.1E-28 T 13-10-2018 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Pfam PF00009 Elongation factor Tu GTP binding domain 26 217 2.3E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Hamap MF_00118_B Elongation factor Tu [tuf]. 17 410 59.339 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Gene3D G3DSA:3.40.50.300 17 219 5.4E-70 T 13-10-2018 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Pfam PF03144 Elongation factor Tu domain 2 241 309 2.8E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 SUPERFAMILY SSF50447 221 317 1.26E-28 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 SUPERFAMILY SSF52540 22 235 6.23E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 PRINTS PR00315 GTP-binding elongation factor signature 74 82 4.2E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 PRINTS PR00315 GTP-binding elongation factor signature 94 104 4.2E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 PRINTS PR00315 GTP-binding elongation factor signature 110 121 4.2E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 PRINTS PR00315 GTP-binding elongation factor signature 147 156 4.2E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 PRINTS PR00315 GTP-binding elongation factor signature 30 43 4.2E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_04277 88f7d3af1d6c81da1d1f2f29fb9dcb30 410 Gene3D G3DSA:2.40.30.10 222 350 1.0E-50 T 13-10-2018 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 SMART SM00304 227 279 1.3E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 480 7.7E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 SMART SM00387 377 482 6.2E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 Gene3D G3DSA:3.30.565.10 341 483 9.0E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 SUPERFAMILY SSF47384 264 328 1.92E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 SUPERFAMILY SSF55874 347 481 1.2E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 Pfam PF00672 HAMP domain 227 276 1.6E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02306 2cd506e6c5199b795b168abfdf95ac56 484 Gene3D G3DSA:1.10.287.130 231 339 7.9E-17 T 13-10-2018 VAA_00705 ddc6a26d2c1b1efdfb627d0748e8cfad 167 Gene3D G3DSA:1.10.10.10 24 65 9.0E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00705 ddc6a26d2c1b1efdfb627d0748e8cfad 167 Gene3D G3DSA:1.10.10.10 117 164 1.5E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00705 ddc6a26d2c1b1efdfb627d0748e8cfad 167 Pfam PF02631 RecX family 47 164 1.5E-29 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VAA_00705 ddc6a26d2c1b1efdfb627d0748e8cfad 167 Gene3D G3DSA:1.10.10.10 71 114 1.1E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00705 ddc6a26d2c1b1efdfb627d0748e8cfad 167 Hamap MF_01114 Regulatory protein RecX [recX]. 3 167 13.583 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Gene3D G3DSA:1.20.120.1510 452 565 1.5E-31 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 SUPERFAMILY SSF81301 24 290 2.32E-87 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Gene3D G3DSA:1.20.120.330 289 444 4.5E-55 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Gene3D G3DSA:1.10.4050.10 3 113 3.8E-13 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Pfam PF08335 GlnD PII-uridylyltransferase 301 440 1.1E-45 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 31 849 16.638 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 SUPERFAMILY SSF81301 529 816 7.14E-89 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 1.0E-98 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 280 4.3E-92 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Gene3D G3DSA:3.30.460.100 566 815 1.2E-92 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 SUPERFAMILY SSF81593 291 440 1.49E-43 T 13-10-2018 VAA_03753 8e32d6f14d70f8fc906c05da5eb30164 849 Gene3D G3DSA:3.30.460.10 115 288 1.2E-64 T 13-10-2018 VAA_03180 ef1bb615882c850f8b229251d84664b7 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.3E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_03180 ef1bb615882c850f8b229251d84664b7 246 SUPERFAMILY SSF161098 11 233 3.01E-38 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03180 ef1bb615882c850f8b229251d84664b7 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 7.4E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_03180 ef1bb615882c850f8b229251d84664b7 246 Gene3D G3DSA:1.10.3720.10 3 243 6.0E-49 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03405 a687057f8442754cbebed0453c829c52 260 SMART SM00382 29 199 1.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03405 a687057f8442754cbebed0453c829c52 260 Gene3D G3DSA:3.40.50.300 1 241 7.3E-55 T 13-10-2018 VAA_03405 a687057f8442754cbebed0453c829c52 260 Pfam PF00005 ABC transporter 20 148 1.4E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03405 a687057f8442754cbebed0453c829c52 260 SUPERFAMILY SSF52540 3 222 1.96E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 Gene3D G3DSA:3.90.1150.10 5 375 1.8E-167 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 Pfam PF00266 Aminotransferase class-V 5 368 1.2E-90 T 13-10-2018 IPR000192 Aminotransferase class V domain VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.049 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 PIRSF PIRSF005572 2 384 3.5E-138 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 SUPERFAMILY SSF53383 5 391 2.55E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 Gene3D G3DSA:3.40.640.10 16 262 1.8E-167 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00519 883e62c501ec8055696bf2b97dee7fb8 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 3.0E-229 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VAA_03768 0013cf1131c22ad426812c2192ce432c 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 67.437 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VAA_03768 0013cf1131c22ad426812c2192ce432c 440 Gene3D G3DSA:3.40.50.150 89 433 3.9E-119 T 13-10-2018 VAA_03768 0013cf1131c22ad426812c2192ce432c 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VAA_03768 0013cf1131c22ad426812c2192ce432c 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 436 1.3E-32 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VAA_03768 0013cf1131c22ad426812c2192ce432c 440 Pfam PF01938 TRAM domain 16 68 2.7E-10 T 13-10-2018 IPR002792 TRAM domain VAA_03768 0013cf1131c22ad426812c2192ce432c 440 SUPERFAMILY SSF50249 17 74 4.91E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03768 0013cf1131c22ad426812c2192ce432c 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site VAA_03768 0013cf1131c22ad426812c2192ce432c 440 Gene3D G3DSA:2.40.50.140 1 88 6.3E-30 T 13-10-2018 VAA_03768 0013cf1131c22ad426812c2192ce432c 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.8E-127 T 13-10-2018 VAA_03768 0013cf1131c22ad426812c2192ce432c 440 SUPERFAMILY SSF53335 77 438 4.86E-85 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03768 0013cf1131c22ad426812c2192ce432c 440 Gene3D G3DSA:3.40.1350.30 135 271 3.9E-119 T 13-10-2018 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 SUPERFAMILY SSF50443 329 496 2.88E-67 T 13-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 SUPERFAMILY SSF53743 1 325 6.02E-120 T 13-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 361 474 1.1E-48 T 13-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 475 62.249 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 Pfam PF02610 L-arabinose isomerase 5 358 3.7E-168 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 PIRSF PIRSF001478 1 498 3.6E-240 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 Gene3D G3DSA:3.40.50.10940 1 175 7.6E-79 T 13-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 VAA_00565 e82e04a778fa6a63388bcdb518100c33 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 7.0E-142 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.5E-70 T 13-10-2018 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.5E-70 T 13-10-2018 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.5E-70 T 13-10-2018 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.5E-70 T 13-10-2018 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.5E-70 T 13-10-2018 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.5E-70 T 13-10-2018 VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 PIRSF PIRSF002764 1 222 5.9E-81 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 2.7E-91 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VAA_03379 1d193b4e8ca0f71c78cdead753b91cec 222 Pfam PF03379 CcmB protein 7 219 3.1E-89 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_02662 9f9ecbec53b0e3609d47de3fca7d850c 313 Pfam PF01112 Asparaginase 6 307 1.1E-110 T 13-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VAA_02662 9f9ecbec53b0e3609d47de3fca7d850c 313 SUPERFAMILY SSF56235 5 309 6.08E-98 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02662 9f9ecbec53b0e3609d47de3fca7d850c 313 Gene3D G3DSA:3.60.20.30 178 313 5.9E-49 T 13-10-2018 VAA_01009 e2eaf7c839ce5b4822c8d18c8570dd8c 389 Pfam PF00149 Calcineurin-like phosphoesterase 10 226 1.7E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_01009 e2eaf7c839ce5b4822c8d18c8570dd8c 389 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 10 253 2.5E-56 T 13-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VAA_01009 e2eaf7c839ce5b4822c8d18c8570dd8c 389 Gene3D G3DSA:3.60.21.10 6 274 2.9E-79 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_01009 e2eaf7c839ce5b4822c8d18c8570dd8c 389 SUPERFAMILY SSF56300 10 329 1.96E-54 T 13-10-2018 VAA_01009 e2eaf7c839ce5b4822c8d18c8570dd8c 389 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 277 360 5.8E-8 T 13-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 SUPERFAMILY SSF48179 348 487 3.06E-41 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 Gene3D G3DSA:1.10.1040.10 209 494 2.3E-119 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 SUPERFAMILY SSF48179 210 341 3.23E-39 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 Gene3D G3DSA:3.40.50.720 1 208 2.7E-87 T 13-10-2018 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 3.6E-60 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 SUPERFAMILY SSF51735 27 209 7.58E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 37.214 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 352 485 6.4E-16 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 8.9E-26 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAA_00586 fd986f0ac3e10465e1b3d53eb1b644c4 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 7.9E-125 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Pfam PF00270 DEAD/DEAH box helicase 97 243 6.1E-8 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 SMART SM00487 82 269 5.2E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Pfam PF11898 Domain of unknown function (DUF3418) 725 1309 8.9E-230 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 SUPERFAMILY SSF52540 84 614 1.28E-111 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 SMART SM00490 313 413 8.9E-14 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Gene3D G3DSA:3.40.50.300 38 262 3.9E-77 T 13-10-2018 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 24 1309 0.0 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Pfam PF04408 Helicase associated domain (HA2) 475 570 1.6E-18 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Gene3D G3DSA:3.40.50.300 263 430 2.9E-54 T 13-10-2018 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 SMART SM00382 102 393 1.3E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 SMART SM00847 473 572 1.7E-35 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Gene3D G3DSA:1.20.120.1080 457 563 1.7E-18 T 13-10-2018 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 635 711 1.6E-21 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 VAA_01465 e2c179723696eb414fd8c340f79d3b02 1311 Pfam PF00271 Helicase conserved C-terminal domain 298 412 1.3E-10 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 233 5.1E-57 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 Gene3D G3DSA:3.40.50.720 1 334 2.4E-101 T 13-10-2018 VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.9E-30 T 13-10-2018 VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 5.9E-30 T 13-10-2018 VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 5.9E-30 T 13-10-2018 VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 5.9E-30 T 13-10-2018 VAA_02521 5dbd1e927c1ff67418678fc110d58d32 334 SUPERFAMILY SSF51735 1 333 6.71E-92 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02491 bff950884b3c63244b1f6e37292d0979 565 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 328 3.1E-25 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAA_02491 bff950884b3c63244b1f6e37292d0979 565 SUPERFAMILY SSF52467 203 351 1.03E-28 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_02491 bff950884b3c63244b1f6e37292d0979 565 SUPERFAMILY SSF52518 367 563 7.27E-41 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_02491 bff950884b3c63244b1f6e37292d0979 565 SUPERFAMILY SSF52518 1 184 1.53E-42 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_02491 bff950884b3c63244b1f6e37292d0979 565 Gene3D G3DSA:3.40.50.970 359 538 8.9E-99 T 13-10-2018 VAA_02491 bff950884b3c63244b1f6e37292d0979 565 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 6.1E-33 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAA_02491 bff950884b3c63244b1f6e37292d0979 565 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 176 3.2E-45 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAA_02491 bff950884b3c63244b1f6e37292d0979 565 Gene3D G3DSA:3.40.50.970 1 179 7.8E-65 T 13-10-2018 VAA_02491 bff950884b3c63244b1f6e37292d0979 565 Gene3D G3DSA:3.40.50.1220 205 358 8.9E-99 T 13-10-2018 VAA_00843 70f6b17e907102331ffabd196d282cb4 249 SMART SM00382 26 223 2.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00843 70f6b17e907102331ffabd196d282cb4 249 PIRSF PIRSF039085 1 244 5.6E-105 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAA_00843 70f6b17e907102331ffabd196d282cb4 249 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00843 70f6b17e907102331ffabd196d282cb4 249 Pfam PF00005 ABC transporter 17 168 9.5E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00843 70f6b17e907102331ffabd196d282cb4 249 SUPERFAMILY SSF52540 1 238 4.26E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00843 70f6b17e907102331ffabd196d282cb4 249 Gene3D G3DSA:3.40.50.300 1 245 4.2E-76 T 13-10-2018 VAA_03122 15cf1b84dc71e5c4c837ff0187d20fde 66 Gene3D G3DSA:2.30.130.30 2 66 1.5E-23 T 13-10-2018 VAA_03122 15cf1b84dc71e5c4c837ff0187d20fde 66 SUPERFAMILY SSF88697 4 66 9.94E-16 T 13-10-2018 IPR015947 PUA-like superfamily VAA_03122 15cf1b84dc71e5c4c837ff0187d20fde 66 Pfam PF04266 ASCH domain 7 66 8.0E-6 T 13-10-2018 IPR007374 ASCH domain VAA_01893 8e13499241d37422e043fcdf3fb902cb 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 1.2E-47 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VAA_01893 8e13499241d37422e043fcdf3fb902cb 109 Gene3D G3DSA:3.30.1420.10 2 38 8.8E-12 T 13-10-2018 VAA_01893 8e13499241d37422e043fcdf3fb902cb 109 PIRSF PIRSF006223 2 109 1.9E-39 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VAA_01893 8e13499241d37422e043fcdf3fb902cb 109 SUPERFAMILY SSF69721 2 109 1.11E-39 T 13-10-2018 IPR025526 DsrC-like domain superfamily VAA_01893 8e13499241d37422e043fcdf3fb902cb 109 Gene3D G3DSA:1.10.10.370 39 109 3.1E-30 T 13-10-2018 VAA_01893 8e13499241d37422e043fcdf3fb902cb 109 Pfam PF04358 DsrC like protein 3 109 5.1E-43 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 SUPERFAMILY SSF51430 2 257 1.02E-79 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PRINTS PR00069 Aldo-keto reductase signature 147 176 3.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PRINTS PR00069 Aldo-keto reductase signature 184 208 3.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PRINTS PR00069 Aldo-keto reductase signature 112 129 3.2E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 Pfam PF00248 Aldo/keto reductase family 192 248 7.5E-8 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 Pfam PF00248 Aldo/keto reductase family 18 182 9.4E-40 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 112 129 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PIRSF PIRSF000097 1 109 2.6E-32 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 PIRSF PIRSF000097 100 264 4.4E-35 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_00990 5b6e2a619f2b6fee30429832bfc16e17 266 Gene3D G3DSA:3.20.20.100 1 266 4.7E-89 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAA_01768 1027ed6b26ecabeac03404a5180f5051 376 Pfam PF01476 LysM domain 39 85 7.9E-13 T 13-10-2018 IPR018392 LysM domain VAA_01768 1027ed6b26ecabeac03404a5180f5051 376 SMART SM00257 38 86 6.1E-5 T 13-10-2018 IPR018392 LysM domain VAA_01768 1027ed6b26ecabeac03404a5180f5051 376 Gene3D G3DSA:3.10.350.10 37 84 2.6E-14 T 13-10-2018 IPR036779 LysM domain superfamily VAA_01768 1027ed6b26ecabeac03404a5180f5051 376 SUPERFAMILY SSF54106 37 85 4.05E-7 T 13-10-2018 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 26 87 5.0E-26 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 Pfam PF01632 Ribosomal protein L35 26 85 4.1E-20 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 ProSitePatterns PS00936 Ribosomal protein L35 signature. 29 54 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 Gene3D G3DSA:2.40.50.530 25 88 2.6E-17 T 13-10-2018 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 25 87 17.798 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 PRINTS PR00064 Ribosomal protein L35 signature 59 77 1.6E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 PRINTS PR00064 Ribosomal protein L35 signature 27 44 1.6E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 PRINTS PR00064 Ribosomal protein L35 signature 44 58 1.6E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VAA_01070 dba4ebc7fc87b720bdfbf82b961e09e0 88 SUPERFAMILY SSF143034 26 87 1.44E-19 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 Gene3D G3DSA:3.40.50.2300 16 155 2.4E-30 T 13-10-2018 VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 Gene3D G3DSA:1.10.3210.10 198 393 1.1E-33 T 13-10-2018 VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 SUPERFAMILY SSF52172 13 156 1.41E-30 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 SUPERFAMILY SSF109604 213 380 4.57E-16 T 13-10-2018 VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 Pfam PF13487 HD domain 287 335 5.2E-12 T 13-10-2018 VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 Pfam PF00072 Response regulator receiver domain 18 125 3.4E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01587 2ec2c24953b0b6a8c4cc7512a3430119 451 SMART SM00448 15 126 7.5E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 9.2E-27 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 9.2E-27 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 9.2E-27 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 Gene3D G3DSA:2.10.109.10 77 271 2.0E-75 T 13-10-2018 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 1.4E-47 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 Pfam PF00717 Peptidase S24-like 85 161 8.9E-22 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 Pfam PF10502 Signal peptidase, peptidase S26 208 268 6.1E-8 T 13-10-2018 IPR019533 Peptidase S26 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 SUPERFAMILY SSF51306 77 296 5.58E-70 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 Gene3D G3DSA:2.170.230.10 154 230 2.0E-75 T 13-10-2018 VAA_03776 b882a9fb96b6d05e7c6ce79b211d3417 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 SUPERFAMILY SSF54506 4 132 5.89E-48 T 13-10-2018 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.375 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 Gene3D G3DSA:3.10.310.10 117 263 1.7E-105 T 13-10-2018 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 6.9E-101 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 SUPERFAMILY SSF54506 138 274 2.98E-50 T 13-10-2018 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 Pfam PF01678 Diaminopimelate epimerase 154 269 3.1E-30 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 Pfam PF01678 Diaminopimelate epimerase 5 124 2.4E-33 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VAA_01956 3243be7401dea2ff62fbf9f66abb48b2 276 Gene3D G3DSA:3.10.310.10 5 272 1.7E-105 T 13-10-2018 VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 Pfam PF06418 CTP synthase N-terminus 5 265 3.7E-125 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 8.5E-261 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 SUPERFAMILY SSF52540 3 269 1.51E-121 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 SUPERFAMILY SSF52317 289 539 1.49E-87 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.291 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 Gene3D G3DSA:3.40.50.880 286 544 5.2E-106 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 7.3E-63 T 13-10-2018 IPR017926 Glutamine amidotransferase VAA_03765 138ef1c2421683bf3812e57d9fe27a64 546 Gene3D G3DSA:3.40.50.300 1 285 3.0E-134 T 13-10-2018 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 4 546 0.0 T 13-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 441 9.3E-29 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Gene3D G3DSA:3.40.120.10 224 321 1.9E-45 T 13-10-2018 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 493 538 4.2E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Gene3D G3DSA:3.40.120.10 15 221 1.5E-73 T 13-10-2018 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 SUPERFAMILY SSF53738 212 320 4.47E-8 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 213 320 7.0E-18 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 183 5.8E-39 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Gene3D G3DSA:3.40.120.10 322 445 2.7E-35 T 13-10-2018 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 Gene3D G3DSA:3.30.310.50 446 549 1.2E-34 T 13-10-2018 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 SUPERFAMILY SSF53738 308 450 2.75E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 SUPERFAMILY SSF55957 435 546 2.09E-19 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_03420 34038560d9ad9ddacd907b674957ead2 551 SUPERFAMILY SSF53738 30 238 9.18E-52 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VAA_01820 8b66a30b3636512ca08444b879b7696a 351 SUPERFAMILY SSF50331 239 347 5.39E-15 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_01820 8b66a30b3636512ca08444b879b7696a 351 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01820 8b66a30b3636512ca08444b879b7696a 351 Gene3D G3DSA:2.40.50.940 225 282 2.9E-8 T 13-10-2018 VAA_01820 8b66a30b3636512ca08444b879b7696a 351 SMART SM00382 31 214 1.3E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01820 8b66a30b3636512ca08444b879b7696a 351 Pfam PF08402 TOBE domain 276 341 4.3E-5 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAA_01820 8b66a30b3636512ca08444b879b7696a 351 Gene3D G3DSA:3.40.50.300 7 224 5.8E-69 T 13-10-2018 VAA_01820 8b66a30b3636512ca08444b879b7696a 351 SUPERFAMILY SSF52540 7 244 3.51E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01820 8b66a30b3636512ca08444b879b7696a 351 Pfam PF00005 ABC transporter 24 164 9.8E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01820 8b66a30b3636512ca08444b879b7696a 351 Gene3D G3DSA:2.40.50.140 283 321 2.9E-8 T 13-10-2018 VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 12 269 42.123 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 PIRSF PIRSF000456 11 269 1.2E-94 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Gene3D G3DSA:2.160.10.10 8 203 1.0E-49 T 13-10-2018 VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 9 40 1.1E-6 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 43 76 2.6E-4 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 4.1E-6 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 SUPERFAMILY SSF51161 8 269 1.75E-73 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Gene3D G3DSA:1.20.1180.10 204 269 5.0E-20 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 15 267 1.5E-93 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VAA_03565 9b9ae3a8526108e3999ecc2883657d56 269 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 187 268 5.4E-25 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 Pfam PF01895 PhoU domain 129 211 7.3E-16 T 13-10-2018 IPR026022 PhoU domain VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 Pfam PF01895 PhoU domain 24 109 1.8E-22 T 13-10-2018 IPR026022 PhoU domain VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 220 1.4E-76 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 PIRSF PIRSF003107 5 225 3.7E-70 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 SUPERFAMILY SSF109755 11 226 5.34E-70 T 13-10-2018 VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 Gene3D G3DSA:1.20.58.220 2 117 1.2E-41 T 13-10-2018 IPR038078 PhoU-like domain superfamily VAA_00535 0b8f35adba4c762ca24d8ca1e3aacc37 233 Gene3D G3DSA:1.20.58.220 118 231 3.8E-34 T 13-10-2018 IPR038078 PhoU-like domain superfamily VAA_02218 f7f410fbef2af629645bdc22a9a1b73a 547 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.9E-294 T 13-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VAA_02218 f7f410fbef2af629645bdc22a9a1b73a 547 SUPERFAMILY SSF53383 29 527 4.75E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02218 f7f410fbef2af629645bdc22a9a1b73a 547 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 60 442 3.0E-53 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VAA_02218 f7f410fbef2af629645bdc22a9a1b73a 547 Gene3D G3DSA:3.90.1150.170 56 523 3.9E-110 T 13-10-2018 VAA_02218 f7f410fbef2af629645bdc22a9a1b73a 547 Gene3D G3DSA:3.40.640.10 122 387 3.9E-110 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 101 4.1E-11 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 9.5E-96 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.724 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 Gene3D G3DSA:2.60.300.12 3 101 2.2E-13 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 183 4.0E-25 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 Pfam PF01106 NifU-like domain 114 180 1.8E-19 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 SUPERFAMILY SSF117916 98 187 1.2E-22 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 Gene3D G3DSA:3.30.300.130 104 192 3.2E-19 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VAA_00640 c6405dbd00da6307dc1d0e49177a13e0 195 SUPERFAMILY SSF89360 5 100 3.92E-21 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAA_03209 e52872c14e92f3470233053088d46126 689 Gene3D G3DSA:2.100.10.30 313 440 5.6E-25 T 13-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAA_03209 e52872c14e92f3470233053088d46126 689 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site VAA_03209 e52872c14e92f3470233053088d46126 689 SUPERFAMILY SSF69318 61 294 4.05E-20 T 13-10-2018 VAA_03209 e52872c14e92f3470233053088d46126 689 SUPERFAMILY SSF69318 202 667 2.22E-11 T 13-10-2018 VAA_03209 e52872c14e92f3470233053088d46126 689 Pfam PF16458 Beta-prism lectin 317 451 1.9E-49 T 13-10-2018 IPR032496 Hemolysin, beta-prism lectin VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 369 38.831 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 SUPERFAMILY SSF52738 180 364 1.7E-62 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 Gene3D G3DSA:3.40.50.180 178 367 4.4E-64 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 SMART SM00448 3 122 3.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 Pfam PF00072 Response regulator receiver domain 5 109 6.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 Gene3D G3DSA:3.40.50.2300 2 130 2.6E-31 T 13-10-2018 VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 Pfam PF01339 CheB methylesterase 186 363 3.9E-58 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 SUPERFAMILY SSF52172 2 109 3.84E-26 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03385 d13677bbcd991ef40c70bed2232dc796 371 PIRSF PIRSF000876 1 369 4.7E-127 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 Pfam PF00696 Amino acid kinase family 5 278 2.7E-29 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 2.0E-120 T 13-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 SUPERFAMILY SSF53633 4 300 5.5E-78 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 Gene3D G3DSA:3.40.1160.10 1 303 3.4E-115 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PIRSF PIRSF000723 2 302 2.5E-115 T 13-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 3.7E-62 T 13-10-2018 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 3.7E-62 T 13-10-2018 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 3.7E-62 T 13-10-2018 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 3.7E-62 T 13-10-2018 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 3.7E-62 T 13-10-2018 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 3.7E-62 T 13-10-2018 VAA_02562 6f598bdf0c6d605503faf5356167ea98 303 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 3.7E-62 T 13-10-2018 VAA_02810 21de5b08164f5459137237587f6056cd 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 264 1.3E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_02810 21de5b08164f5459137237587f6056cd 267 SUPERFAMILY SSF161098 18 264 1.5E-43 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02810 21de5b08164f5459137237587f6056cd 267 Gene3D G3DSA:1.10.3720.10 10 260 2.8E-37 T 13-10-2018 IPR035906 MetI-like superfamily VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 SMART SM00487 19 216 3.4E-50 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 Gene3D G3DSA:3.40.50.300 207 392 9.2E-45 T 13-10-2018 VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 147 155 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 SUPERFAMILY SSF52540 69 353 7.54E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 Pfam PF00270 DEAD/DEAH box helicase 24 189 1.6E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 Gene3D G3DSA:3.40.50.300 1 205 1.9E-65 T 13-10-2018 VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 SMART SM00490 252 333 5.7E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_012815 b3ae2f309705c1418f9dea8ba41f8f93 408 Pfam PF00271 Helicase conserved C-terminal domain 225 333 5.1E-28 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 Pfam PF12833 Helix-turn-helix domain 245 322 5.2E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 SUPERFAMILY SSF52317 10 192 3.21E-25 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 SMART SM00342 238 321 1.7E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 SUPERFAMILY SSF46689 221 272 2.6E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 317 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 Gene3D G3DSA:1.10.10.2730 281 324 1.7E-15 T 13-10-2018 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 Pfam PF01965 DJ-1/PfpI family 15 142 6.3E-9 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 SUPERFAMILY SSF46689 274 325 3.19E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 Gene3D G3DSA:1.10.10.60 217 280 4.6E-10 T 13-10-2018 VAA_03013 b60362bfa0c2a112e1a4e0909a9d8d47 334 Gene3D G3DSA:3.40.50.880 4 211 1.3E-36 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03297 54328ad5fda278640bdfa33a560bbc48 499 Gene3D G3DSA:3.40.50.12780 3 370 8.1E-66 T 13-10-2018 VAA_03297 54328ad5fda278640bdfa33a560bbc48 499 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_03297 54328ad5fda278640bdfa33a560bbc48 499 Pfam PF00501 AMP-binding enzyme 9 377 1.4E-54 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_03297 54328ad5fda278640bdfa33a560bbc48 499 SUPERFAMILY SSF56801 3 472 1.83E-76 T 13-10-2018 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 Pfam PF00483 Nucleotidyl transferase 6 272 7.8E-68 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 Gene3D G3DSA:3.90.550.10 1 281 8.5E-92 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.1E-154 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.402 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 SUPERFAMILY SSF51161 312 396 6.77E-19 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 SUPERFAMILY SSF53448 4 341 1.01E-78 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01570 75ffee3a20d1f77e12b39d61fa30dc03 404 Gene3D G3DSA:2.160.10.10 282 403 6.6E-34 T 13-10-2018 VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.0E-66 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 Gene3D G3DSA:3.40.50.1100 43 145 6.5E-124 T 13-10-2018 VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 SUPERFAMILY SSF53686 4 309 1.96E-95 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 3.6E-141 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 Gene3D G3DSA:3.40.50.1100 12 306 6.5E-124 T 13-10-2018 VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VAA_01082 b70a20a5964bfb7353a087bbc62bc5e3 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 2.4E-134 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 5.0E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 1.5E-172 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 SMART SM00382 158 342 2.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 Gene3D G3DSA:3.40.50.12240 18 439 7.3E-156 T 13-10-2018 VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 SUPERFAMILY SSF52540 93 362 4.16E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_04454 65597d3cdd32e5b9cc51e412ae97fea5 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 1.3E-193 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_01291 bbed18d41455f5bb286e581b1ef4344e 435 Pfam PF01551 Peptidase family M23 293 386 4.4E-30 T 13-10-2018 IPR016047 Peptidase M23 VAA_01291 bbed18d41455f5bb286e581b1ef4344e 435 SUPERFAMILY SSF51261 144 388 2.98E-65 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_01291 bbed18d41455f5bb286e581b1ef4344e 435 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 153 4.1E-6 T 13-10-2018 IPR007340 Opacity-associated protein A VAA_01291 bbed18d41455f5bb286e581b1ef4344e 435 Gene3D G3DSA:3.10.450.350 159 263 4.6E-33 T 13-10-2018 VAA_01291 bbed18d41455f5bb286e581b1ef4344e 435 Gene3D G3DSA:2.70.70.10 264 393 2.7E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_01291 bbed18d41455f5bb286e581b1ef4344e 435 Gene3D G3DSA:3.10.450.350 65 158 2.6E-31 T 13-10-2018 VAA_00805 446e20e2dd32f136afb12089fc39727e 142 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 120 1.3E-35 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAA_00805 446e20e2dd32f136afb12089fc39727e 142 ProSitePatterns PS01319 Ribosome-binding factor A signature. 81 102 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VAA_00805 446e20e2dd32f136afb12089fc39727e 142 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 102 4.0E-45 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAA_00805 446e20e2dd32f136afb12089fc39727e 142 Pfam PF02033 Ribosome-binding factor A 11 114 1.7E-30 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAA_00805 446e20e2dd32f136afb12089fc39727e 142 Gene3D G3DSA:3.30.300.20 5 110 5.8E-35 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_00805 446e20e2dd32f136afb12089fc39727e 142 SUPERFAMILY SSF89919 6 109 1.22E-31 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VAA_00805 446e20e2dd32f136afb12089fc39727e 142 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 115 26.15 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 Gene3D G3DSA:3.40.190.10 167 267 1.1E-38 T 13-10-2018 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 Pfam PF03466 LysR substrate binding domain 90 293 8.9E-48 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 Gene3D G3DSA:3.40.190.10 94 290 1.1E-38 T 13-10-2018 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 Gene3D G3DSA:1.10.10.10 4 93 3.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 SUPERFAMILY SSF53850 92 294 1.41E-42 T 13-10-2018 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.6E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03639 e4d9cc8812de746d3b200e7b04a7f8db 297 SUPERFAMILY SSF46785 5 113 1.72E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03629 276c631abb42b28e25399bd0ebb5057b 143 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.6E-43 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VAA_03629 276c631abb42b28e25399bd0ebb5057b 143 SUPERFAMILY SSF82649 3 139 4.92E-47 T 13-10-2018 VAA_03629 276c631abb42b28e25399bd0ebb5057b 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 2.1E-44 T 13-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VAA_03629 276c631abb42b28e25399bd0ebb5057b 143 Gene3D G3DSA:3.90.1010.10 1 141 1.1E-48 T 13-10-2018 VAA_00708 6678d3b8c4a68162c38627a39be85c9b 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAA_00708 6678d3b8c4a68162c38627a39be85c9b 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VAA_00708 6678d3b8c4a68162c38627a39be85c9b 65 Gene3D G3DSA:3.30.70.1680 1 59 7.6E-30 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VAA_00708 6678d3b8c4a68162c38627a39be85c9b 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAA_00708 6678d3b8c4a68162c38627a39be85c9b 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.025 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAA_00708 6678d3b8c4a68162c38627a39be85c9b 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 3.9E-30 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VAA_02724 56707dd1f87ec8e6deec1fef07072b5a 123 SUPERFAMILY SSF110857 9 122 1.02E-31 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VAA_02724 56707dd1f87ec8e6deec1fef07072b5a 123 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 13 120 4.6E-24 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VAA_02724 56707dd1f87ec8e6deec1fef07072b5a 123 Gene3D G3DSA:3.10.490.10 12 123 3.2E-39 T 13-10-2018 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SMART SM01231 374 434 4.1E-16 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 375 434 3.4E-11 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 2.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 2.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 2.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SMART SM00073 6 103 5.6E-20 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Pfam PF01584 CheW-like domain 628 757 2.7E-21 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SUPERFAMILY SSF55874 437 620 1.7E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 621 9.3E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Pfam PF01627 Hpt domain 8 101 1.2E-17 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Gene3D G3DSA:1.20.120.160 3 144 1.9E-36 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Gene3D G3DSA:2.30.30.40 622 751 2.1E-34 T 13-10-2018 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SUPERFAMILY SSF47384 375 435 2.31E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SUPERFAMILY SSF47226 6 127 4.32E-31 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Gene3D G3DSA:2.40.50.180 645 710 2.1E-34 T 13-10-2018 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Gene3D G3DSA:3.30.565.10 435 621 1.2E-54 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SMART SM00387 479 622 3.6E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SMART SM00260 614 755 9.1E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 SUPERFAMILY SSF50341 621 755 2.22E-28 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_03386 3d491013f9358e02b71ed3abf3c093f8 764 Gene3D G3DSA:1.10.287.560 374 434 5.0E-18 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.9E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 Gene3D G3DSA:2.40.50.140 1 65 3.3E-26 T 13-10-2018 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 4.3E-42 T 13-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 PIRSF PIRSF002599 1 73 4.3E-23 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 SMART SM00357 3 67 2.6E-27 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 PRINTS PR00050 Cold shock protein signature 4 19 4.0E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 PRINTS PR00050 Cold shock protein signature 25 34 4.0E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 PRINTS PR00050 Cold shock protein signature 40 58 4.0E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_02189 49b9c40613d08e3ea1cd753e2a7f75db 73 SUPERFAMILY SSF50249 1 67 2.36E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00745 a52be7776754fc9a9fd97b311d8a37cd 222 Pfam PF00484 Carbonic anhydrase 38 188 8.1E-50 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAA_00745 a52be7776754fc9a9fd97b311d8a37cd 222 SMART SM00947 30 192 2.9E-65 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAA_00745 a52be7776754fc9a9fd97b311d8a37cd 222 Gene3D G3DSA:3.40.1050.10 1 222 2.8E-91 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VAA_00745 a52be7776754fc9a9fd97b311d8a37cd 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAA_00745 a52be7776754fc9a9fd97b311d8a37cd 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VAA_00745 a52be7776754fc9a9fd97b311d8a37cd 222 SUPERFAMILY SSF53056 2 214 2.35E-75 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 Pfam PF00672 HAMP domain 308 354 1.0E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 Gene3D G3DSA:3.30.450.20 64 175 3.8E-25 T 13-10-2018 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 SUPERFAMILY SSF58104 326 529 4.45E-54 T 13-10-2018 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 Gene3D G3DSA:3.30.450.20 54 277 3.8E-25 T 13-10-2018 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 SMART SM00283 359 534 6.9E-5 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 447 530 1.6E-30 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 1.1E-6 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 529 1.1E-6 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 SMART SM00304 304 358 6.9E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 Pfam PF02743 Cache domain 37 258 1.9E-19 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 Gene3D G3DSA:1.10.287.950 304 533 7.9E-58 T 13-10-2018 VAA_00890 af6ef7dacf60299c0d7e830b3754ff80 535 SUPERFAMILY SSF103190 118 184 1.18E-8 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_03100 90b4d6aa98932a100aea2b8894290217 924 SUPERFAMILY SSF55785 361 480 6.63E-12 T 13-10-2018 IPR035965 PAS domain superfamily VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Pfam PF00563 EAL domain 668 907 6.8E-70 T 13-10-2018 IPR001633 EAL domain VAA_03100 90b4d6aa98932a100aea2b8894290217 924 SMART SM00267 482 649 8.7E-4 T 13-10-2018 IPR000160 GGDEF domain VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Pfam PF00990 Diguanylate cyclase, GGDEF domain 494 632 8.6E-8 T 13-10-2018 IPR000160 GGDEF domain VAA_03100 90b4d6aa98932a100aea2b8894290217 924 SUPERFAMILY SSF141868 668 917 1.29E-77 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Gene3D G3DSA:3.20.20.450 663 917 9.1E-84 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03100 90b4d6aa98932a100aea2b8894290217 924 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 368 487 4.2E-10 T 13-10-2018 IPR000014 PAS domain VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Gene3D G3DSA:3.30.450.20 370 481 1.0E-13 T 13-10-2018 VAA_03100 90b4d6aa98932a100aea2b8894290217 924 SMART SM00052 662 912 2.2E-94 T 13-10-2018 IPR001633 EAL domain VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Pfam PF05228 CHASE4 domain 72 226 1.2E-30 T 13-10-2018 IPR007892 CHASE4 VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Gene3D G3DSA:3.30.70.270 482 651 3.6E-13 T 13-10-2018 VAA_03100 90b4d6aa98932a100aea2b8894290217 924 SUPERFAMILY SSF55073 499 650 4.71E-11 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03100 90b4d6aa98932a100aea2b8894290217 924 Pfam PF13426 PAS domain 383 481 3.1E-8 T 13-10-2018 IPR000014 PAS domain VAA_01621 5b1fb24adb1f9b4140abf081a79c0d2c 330 Pfam PF04198 Putative sugar-binding domain 66 320 9.9E-77 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VAA_01621 5b1fb24adb1f9b4140abf081a79c0d2c 330 Gene3D G3DSA:1.10.10.60 9 59 2.5E-18 T 13-10-2018 VAA_01621 5b1fb24adb1f9b4140abf081a79c0d2c 330 Gene3D G3DSA:3.40.50.1360 60 325 1.2E-79 T 13-10-2018 VAA_01621 5b1fb24adb1f9b4140abf081a79c0d2c 330 SUPERFAMILY SSF100950 70 320 6.98E-64 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 Gene3D G3DSA:3.40.50.1000 9 189 7.4E-43 T 13-10-2018 IPR023214 HAD superfamily VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 187 5.9E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 5.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 5.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 189 5.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 SUPERFAMILY SSF56784 7 193 3.75E-44 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 187 7.1E-28 T 13-10-2018 VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 Gene3D G3DSA:1.10.150.240 20 90 7.4E-43 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAA_01613 6dfa9a6796d0166c47a2fe7422e7b214 201 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 187 1.9E-56 T 13-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VAA_00776 5187320237e2a07b21bb88549b3982b4 330 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00776 5187320237e2a07b21bb88549b3982b4 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 7.5E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_00776 5187320237e2a07b21bb88549b3982b4 330 SUPERFAMILY SSF52540 10 262 7.19E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00776 5187320237e2a07b21bb88549b3982b4 330 Gene3D G3DSA:3.40.50.300 8 330 1.2E-80 T 13-10-2018 VAA_00776 5187320237e2a07b21bb88549b3982b4 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_00776 5187320237e2a07b21bb88549b3982b4 330 Pfam PF00005 ABC transporter 35 192 2.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00776 5187320237e2a07b21bb88549b3982b4 330 SMART SM00382 43 241 4.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01928 698d405ec86b9c43241881a0505e0956 160 SUPERFAMILY SSF54909 63 148 5.5E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_01928 698d405ec86b9c43241881a0505e0956 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAA_01928 698d405ec86b9c43241881a0505e0956 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_01928 698d405ec86b9c43241881a0505e0956 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_01928 698d405ec86b9c43241881a0505e0956 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_01928 698d405ec86b9c43241881a0505e0956 160 Gene3D G3DSA:1.10.10.10 1 56 1.6E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01928 698d405ec86b9c43241881a0505e0956 160 SUPERFAMILY SSF46785 2 62 7.25E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01928 698d405ec86b9c43241881a0505e0956 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.2E-17 T 13-10-2018 VAA_01928 698d405ec86b9c43241881a0505e0956 160 SMART SM00344 3 112 1.2E-41 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAA_01928 698d405ec86b9c43241881a0505e0956 160 Gene3D G3DSA:3.30.70.920 57 140 2.2E-25 T 13-10-2018 VAA_01928 698d405ec86b9c43241881a0505e0956 160 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 9.2E-22 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAA_00506 c95e8d195e8a8082d23c3b0a0ba856fc 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 4.9E-58 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VAA_00506 c95e8d195e8a8082d23c3b0a0ba856fc 204 PIRSF PIRSF006170 1 204 2.3E-52 T 13-10-2018 IPR026039 Uncharacterised protein family UPF0070 VAA_00506 c95e8d195e8a8082d23c3b0a0ba856fc 204 SUPERFAMILY SSF48452 90 189 3.37E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00506 c95e8d195e8a8082d23c3b0a0ba856fc 204 Gene3D G3DSA:1.25.40.10 48 165 1.4E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 SMART SM00283 283 544 6.6E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 Pfam PF17200 Single Cache domain 2 51 192 2.4E-25 T 13-10-2018 IPR033480 Single Cache domain 2 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 Pfam PF00672 HAMP domain 216 259 2.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 SUPERFAMILY SSF58104 236 545 4.19E-70 T 13-10-2018 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 510 3.5E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 Gene3D G3DSA:1.10.287.950 216 545 2.1E-71 T 13-10-2018 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 SMART SM00304 269 321 37.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 SMART SM00304 216 268 6.9E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 Gene3D G3DSA:3.30.450.20 47 192 1.0E-29 T 13-10-2018 VAA_01987 9bc08f061d6cfe5ca16d5c632d0a462f 545 SMART SM01049 45 135 3.9E-19 T 13-10-2018 IPR033480 Single Cache domain 2 VAA_00842 7cdf58f742837e8151a58b40817b8f2a 45 Pfam PF00468 Ribosomal protein L34 3 44 2.4E-23 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00842 7cdf58f742837e8151a58b40817b8f2a 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00842 7cdf58f742837e8151a58b40817b8f2a 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.235 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00842 7cdf58f742837e8151a58b40817b8f2a 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 2.1E-25 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00842 7cdf58f742837e8151a58b40817b8f2a 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 40 4.0E-14 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00675 0a8c1056624bcf288db4dd2375769213 468 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 25 105 4.4E-12 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_00675 0a8c1056624bcf288db4dd2375769213 468 Pfam PF07804 HipA-like C-terminal domain 145 417 5.7E-43 T 13-10-2018 IPR012893 HipA-like, C-terminal VAA_00675 0a8c1056624bcf288db4dd2375769213 468 Pfam PF13657 HipA N-terminal domain 7 106 2.0E-16 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 61 167 1.1E-33 T 13-10-2018 IPR033414 Periplasmic sensor domain VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 546 651 4.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 SUPERFAMILY SSF55874 500 651 1.31E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 Gene3D G3DSA:1.10.287.130 392 493 4.5E-18 T 13-10-2018 VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 SMART SM00387 541 653 1.2E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 Gene3D G3DSA:3.30.565.10 498 654 2.2E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 630 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 650 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 595 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02985 bfe7e204032acf1a575771dd4e388dad 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 609 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SUPERFAMILY SSF50249 71 154 6.52E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Gene3D G3DSA:2.40.50.140 653 763 2.2E-26 T 13-10-2018 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Pfam PF00773 RNB domain 267 594 1.4E-107 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.287 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SMART SM00955 267 595 8.4E-184 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SMART SM00357 90 152 2.7E-11 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 733 3.7E-272 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 1.1E-11 T 13-10-2018 IPR013668 Ribonuclease R winged-helix domain VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SUPERFAMILY SSF50249 145 244 1.16E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Pfam PF00575 S1 RNA binding domain 650 732 2.0E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 1.5E-256 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SMART SM00316 650 733 2.2E-14 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SUPERFAMILY SSF50249 651 740 1.57E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Gene3D G3DSA:2.40.50.140 77 155 3.8E-11 T 13-10-2018 VAA_02666 9609bbebf52c66dac9b975213603f88c 815 Pfam PF08206 Ribonuclease B OB domain 91 151 8.8E-21 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VAA_02666 9609bbebf52c66dac9b975213603f88c 815 SUPERFAMILY SSF50249 227 650 2.11E-143 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01539 4b7c62350591f52a81e37527d9937765 530 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 161 173 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAA_01539 4b7c62350591f52a81e37527d9937765 530 SUPERFAMILY SSF53067 29 281 2.18E-92 T 13-10-2018 VAA_01539 4b7c62350591f52a81e37527d9937765 530 Gene3D G3DSA:3.30.420.40 280 526 1.6E-93 T 13-10-2018 VAA_01539 4b7c62350591f52a81e37527d9937765 530 Hamap MF_00186 Glycerol kinase [glpK]. 28 523 58.326 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VAA_01539 4b7c62350591f52a81e37527d9937765 530 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 388 408 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAA_01539 4b7c62350591f52a81e37527d9937765 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 30 278 7.5E-85 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VAA_01539 4b7c62350591f52a81e37527d9937765 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 287 476 1.7E-60 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VAA_01539 4b7c62350591f52a81e37527d9937765 530 SUPERFAMILY SSF53067 280 522 3.74E-86 T 13-10-2018 VAA_01539 4b7c62350591f52a81e37527d9937765 530 Gene3D G3DSA:3.30.420.40 26 279 2.6E-110 T 13-10-2018 VAA_01539 4b7c62350591f52a81e37527d9937765 530 PIRSF PIRSF000538 28 528 2.6E-175 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VAA_01539 4b7c62350591f52a81e37527d9937765 530 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 29 522 1.2E-225 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VAA_02974 a825cb6a4182b5b3f4c1fcdf5f9a8cff 211 Pfam PF13489 Methyltransferase domain 53 162 6.0E-13 T 13-10-2018 VAA_02974 a825cb6a4182b5b3f4c1fcdf5f9a8cff 211 Gene3D G3DSA:3.40.50.150 17 195 1.0E-25 T 13-10-2018 VAA_02974 a825cb6a4182b5b3f4c1fcdf5f9a8cff 211 SUPERFAMILY SSF53335 23 197 6.94E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03227 68fdbe3ae5238cc7a3a115147c0319b1 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 1.3E-67 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VAA_03227 68fdbe3ae5238cc7a3a115147c0319b1 267 SUPERFAMILY SSF53335 19 198 1.37E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03227 68fdbe3ae5238cc7a3a115147c0319b1 267 Pfam PF08241 Methyltransferase domain 57 150 1.0E-26 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VAA_03227 68fdbe3ae5238cc7a3a115147c0319b1 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 31.787 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VAA_03227 68fdbe3ae5238cc7a3a115147c0319b1 267 Gene3D G3DSA:3.40.50.150 20 203 7.2E-40 T 13-10-2018 VAA_02473 7b369d039f229f2dec1c0e06b1090bdc 412 Pfam PF04932 O-Antigen ligase 182 341 6.1E-15 T 13-10-2018 IPR007016 O-antigen ligase-related VAA_1236 64fdcc243dafd72a3b1996be1951daaf 136 Gene3D G3DSA:3.30.2130.10 5 136 2.1E-46 T 13-10-2018 VAA_1236 64fdcc243dafd72a3b1996be1951daaf 136 Pfam PF10000 ACT domain 8 75 4.5E-26 T 13-10-2018 IPR018717 Domain of unknown function DUF2241 VAA_1236 64fdcc243dafd72a3b1996be1951daaf 136 SUPERFAMILY SSF55021 8 71 2.52E-18 T 13-10-2018 VAA_1236 64fdcc243dafd72a3b1996be1951daaf 136 SUPERFAMILY SSF55021 75 134 6.41E-20 T 13-10-2018 VAA_1236 64fdcc243dafd72a3b1996be1951daaf 136 Pfam PF13840 ACT domain 77 133 6.3E-13 T 13-10-2018 IPR027795 CASTOR, ACT domain VAA_02139 7feef8c93a452528344a2ec30b301faf 262 SMART SM00382 39 228 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02139 7feef8c93a452528344a2ec30b301faf 262 Gene3D G3DSA:3.40.50.300 3 261 3.6E-68 T 13-10-2018 VAA_02139 7feef8c93a452528344a2ec30b301faf 262 Pfam PF00005 ABC transporter 31 179 3.1E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02139 7feef8c93a452528344a2ec30b301faf 262 SUPERFAMILY SSF52540 5 252 2.85E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 1.3E-136 T 13-10-2018 IPR030827 Inositol 2-dehydrogenase VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 238 4.2E-8 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 SUPERFAMILY SSF51735 2 142 2.88E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 SUPERFAMILY SSF55347 124 287 7.46E-37 T 13-10-2018 VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 119 2.5E-21 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 Gene3D G3DSA:3.40.50.720 4 316 6.9E-96 T 13-10-2018 VAA_01471 e76c68ba49899a6ab4208f5cf98fa8b4 328 Gene3D G3DSA:3.30.360.10 138 268 6.9E-96 T 13-10-2018 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 3.4E-262 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 Pfam PF00920 Dehydratase family 34 604 9.0E-217 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 Gene3D G3DSA:3.50.30.80 421 572 2.1E-54 T 13-10-2018 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 SUPERFAMILY SSF143975 3 420 2.62E-134 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 SUPERFAMILY SSF52016 421 608 5.41E-60 T 13-10-2018 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.74 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_00866 a835bb51a9ac8264444b9202d8bae968 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 SUPERFAMILY SSF52935 329 480 1.44E-37 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 Gene3D G3DSA:2.40.33.10 74 172 4.2E-153 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 5.6E-29 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 SUPERFAMILY SSF51621 5 346 9.03E-86 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 Gene3D G3DSA:3.20.20.60 6 341 4.2E-153 T 13-10-2018 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 Gene3D G3DSA:3.40.1380.20 342 476 4.2E-153 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 4.1E-166 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 1.3E-128 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 SUPERFAMILY SSF50800 74 169 3.49E-24 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 275 299 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 223 249 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 300 318 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 250 274 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03328 4be13e9645fc9dd3042b8187f5a3f266 482 PRINTS PR01050 Pyruvate kinase family signature 319 335 5.5E-54 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 Gene3D G3DSA:3.30.450.20 55 270 3.3E-77 T 13-10-2018 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 SMART SM00283 366 627 1.2E-75 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 Gene3D G3DSA:1.10.287.950 297 628 7.4E-67 T 13-10-2018 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 Pfam PF02743 Cache domain 40 260 7.3E-30 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 Gene3D G3DSA:3.30.450.20 68 178 3.3E-77 T 13-10-2018 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 SMART SM00304 379 446 27.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 SMART SM00304 297 351 2.6E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 Pfam PF00672 HAMP domain 297 348 2.0E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 SUPERFAMILY SSF58104 319 626 4.97E-73 T 13-10-2018 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 594 2.5E-44 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00916 e57dd6994749c9cdc18cafb4bf276183 628 SUPERFAMILY SSF103190 93 188 1.49E-18 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_03280 f67acf166452c61162e7838a4d22f39b 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 7 599 7.4E-246 T 13-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 158 168 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 Gene3D G3DSA:3.50.30.80 421 565 5.2E-49 T 13-10-2018 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 SUPERFAMILY SSF143975 5 419 1.02E-126 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 SUPERFAMILY SSF52016 421 600 1.26E-52 T 13-10-2018 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 Pfam PF00920 Dehydratase family 70 597 7.4E-145 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VAA_03280 f67acf166452c61162e7838a4d22f39b 603 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 5 601 54.207 T 13-10-2018 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Pfam PF00136 DNA polymerase family B 381 747 3.5E-43 T 13-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 SUPERFAMILY SSF56672 390 786 1.17E-114 T 13-10-2018 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 ProSitePatterns PS00116 DNA polymerase family B signature. 551 559 - T 13-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 420 433 3.3E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 549 557 3.3E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 497 509 3.3E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Pfam PF03104 DNA polymerase family B, exonuclease domain 188 301 9.2E-14 T 13-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Gene3D G3DSA:2.40.50.590 11 158 9.2E-38 T 13-10-2018 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Gene3D G3DSA:3.30.70.2250 46 113 9.2E-38 T 13-10-2018 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Gene3D G3DSA:1.10.132.60 648 792 3.4E-59 T 13-10-2018 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Gene3D G3DSA:3.30.420.10 161 352 9.8E-69 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Gene3D G3DSA:3.90.1600.10 453 641 3.3E-58 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 Gene3D G3DSA:3.90.1600.10 353 447 1.6E-28 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 SMART SM00486 158 563 1.5E-67 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03117 1fbc3489b1efaa337cbc2e843d25a8a4 792 SUPERFAMILY SSF53098 9 394 2.85E-83 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 24 360 28.539 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 30 260 5.7E-55 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 96 109 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 Gene3D G3DSA:3.30.2350.20 36 355 5.7E-105 T 13-10-2018 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 Gene3D G3DSA:3.30.2340.10 188 320 5.7E-105 T 13-10-2018 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 SUPERFAMILY SSF55120 24 356 3.74E-97 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 27 189 1.2E-41 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00692 efb1f9b15d595f7756e9cc886d78ad02 365 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 202 355 6.5E-22 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02438 e0aef55f1c8c8919c9b2b9668a5198ba 866 SUPERFAMILY SSF52540 36 414 1.57E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02438 e0aef55f1c8c8919c9b2b9668a5198ba 866 Gene3D G3DSA:3.40.50.300 265 446 3.9E-11 T 13-10-2018 VAA_02438 e0aef55f1c8c8919c9b2b9668a5198ba 866 Pfam PF00271 Helicase conserved C-terminal domain 369 415 8.2E-5 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02438 e0aef55f1c8c8919c9b2b9668a5198ba 866 Pfam PF04851 Type III restriction enzyme, res subunit 2 195 1.2E-10 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 2.9E-81 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 Pfam PF02817 e3 binding domain 113 145 6.9E-13 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 SUPERFAMILY SSF47005 106 149 1.7E-11 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 Gene3D G3DSA:2.40.50.100 1 79 6.1E-22 T 13-10-2018 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 SUPERFAMILY SSF52777 172 401 7.56E-90 T 13-10-2018 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 Gene3D G3DSA:3.30.559.10 170 402 1.1E-97 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 SUPERFAMILY SSF51230 1 95 1.83E-24 T 13-10-2018 IPR011053 Single hybrid motif VAA_03409 a8c0965716880efdbddadd4e1119050e 402 Pfam PF00364 Biotin-requiring enzyme 4 76 1.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VAA_03409 a8c0965716880efdbddadd4e1119050e 402 Gene3D G3DSA:4.10.320.10 102 152 6.9E-21 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VAA_03409 a8c0965716880efdbddadd4e1119050e 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 3.2E-185 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.776 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 Gene3D G3DSA:3.30.930.10 2 323 1.0E-119 T 13-10-2018 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 Pfam PF03129 Anticodon binding domain 333 419 8.9E-11 T 13-10-2018 IPR004154 Anticodon-binding VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 SUPERFAMILY SSF52954 327 420 1.6E-26 T 13-10-2018 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 6.5E-159 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 4.3E-46 T 13-10-2018 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 Gene3D G3DSA:3.40.50.800 326 422 7.4E-26 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 PIRSF PIRSF001549 2 422 4.4E-124 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VAA_00507 6a00d02fe2d2c14a41647fe96d6b8c27 422 SUPERFAMILY SSF55681 5 319 3.19E-104 T 13-10-2018 VAA_03583 832ae106494d17d735a1c86512671a0c 337 SUPERFAMILY SSF56042 156 311 8.52E-33 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_03583 832ae106494d17d735a1c86512671a0c 337 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 333 27.088 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VAA_03583 832ae106494d17d735a1c86512671a0c 337 PIRSF PIRSF005303 10 333 1.5E-83 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VAA_03583 832ae106494d17d735a1c86512671a0c 337 Pfam PF02769 AIR synthase related protein, C-terminal domain 162 312 2.5E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VAA_03583 832ae106494d17d735a1c86512671a0c 337 Pfam PF00586 AIR synthase related protein, N-terminal domain 41 150 8.3E-21 T 13-10-2018 IPR016188 PurM-like, N-terminal domain VAA_03583 832ae106494d17d735a1c86512671a0c 337 Gene3D G3DSA:3.90.650.10 157 334 7.6E-49 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_03583 832ae106494d17d735a1c86512671a0c 337 Gene3D G3DSA:3.30.1330.10 14 156 2.7E-41 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_03583 832ae106494d17d735a1c86512671a0c 337 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 333 3.3E-103 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VAA_03583 832ae106494d17d735a1c86512671a0c 337 SUPERFAMILY SSF55326 16 150 1.57E-32 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_01510 1451b32d1a5078d500578c7859ddd858 481 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 316 343 1.6E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01510 1451b32d1a5078d500578c7859ddd858 481 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 345 374 1.6E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01510 1451b32d1a5078d500578c7859ddd858 481 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 239 268 1.6E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01510 1451b32d1a5078d500578c7859ddd858 481 SMART SM00283 218 479 1.5E-57 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01510 1451b32d1a5078d500578c7859ddd858 481 SUPERFAMILY SSF58104 170 479 2.22E-69 T 13-10-2018 VAA_01510 1451b32d1a5078d500578c7859ddd858 481 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 264 443 9.9E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01510 1451b32d1a5078d500578c7859ddd858 481 Gene3D G3DSA:1.10.287.950 155 481 1.2E-65 T 13-10-2018 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 6.1E-265 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Gene3D G3DSA:3.30.930.10 118 578 2.1E-196 T 13-10-2018 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Gene3D G3DSA:2.40.50.140 1 106 6.6E-35 T 13-10-2018 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 SUPERFAMILY SSF55261 288 418 1.34E-45 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.388 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Gene3D G3DSA:3.30.1360.30 271 420 2.1E-196 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 SUPERFAMILY SSF50249 1 105 1.35E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 4.3E-106 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Pfam PF02938 GAD domain 307 406 1.4E-29 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 5.1E-16 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02155 305bb564b9e91a706f0a34e603ad72ad 591 SUPERFAMILY SSF55681 108 582 1.38E-101 T 13-10-2018 VAA_02528 08dcb9be63a9da884fb79de71f1ffbc1 197 Gene3D G3DSA:1.20.1590.10 4 197 1.9E-67 T 13-10-2018 IPR023381 YP001051499.1-like domain superfamily VAA_02528 08dcb9be63a9da884fb79de71f1ffbc1 197 Pfam PF04222 Protein of unknown function (DUF416) 8 196 4.3E-79 T 13-10-2018 IPR007338 Protein of unknown function DUF416 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.658 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.0E-30 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 2.4E-8 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 Gene3D G3DSA:3.20.190.10 2 128 2.2E-40 T 13-10-2018 IPR035937 MutM-like, N-terminal VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 SUPERFAMILY SSF81624 2 138 1.2E-39 T 13-10-2018 IPR035937 MutM-like, N-terminal VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 Gene3D G3DSA:1.10.8.50 131 269 1.5E-45 T 13-10-2018 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 SMART SM01232 129 221 7.5E-42 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 SUPERFAMILY SSF46946 130 221 1.18E-28 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 SUPERFAMILY SSF57716 217 269 1.54E-16 T 13-10-2018 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.2E-95 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 SMART SM00898 2 115 1.5E-51 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VAA_02459 51e4b1762c432161eb2423fbf66d3706 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 9.4E-26 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Gene3D G3DSA:3.40.50.11540 145 292 4.9E-14 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 SUPERFAMILY SSF142019 95 302 4.71E-61 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Pfam PF12838 4Fe-4S dicluster domain 377 430 9.8E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Pfam PF10531 SLBB domain 296 345 3.9E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Gene3D G3DSA:1.10.1060.10 364 445 1.5E-12 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.1E-48 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 SUPERFAMILY SSF46548 336 445 1.24E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 4.6E-195 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 1.4E-35 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VAA_02083 8310e3582f2d8947c680573d7fc994e2 776 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 774 251.591 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VAA_01023 756fcad65893cb7c0c2e4848fccee3c5 286 Pfam PF13503 Domain of unknown function (DUF4123) 22 134 6.2E-18 T 13-10-2018 IPR025391 Domain of unknown function DUF4123 VAA_02867 08cbf331b891c6b7cbb2044b15c300f3 244 Gene3D G3DSA:3.30.450.40 80 240 2.6E-61 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_02867 08cbf331b891c6b7cbb2044b15c300f3 244 SUPERFAMILY SSF46785 7 64 4.49E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02867 08cbf331b891c6b7cbb2044b15c300f3 244 SUPERFAMILY SSF55781 83 240 1.18E-30 T 13-10-2018 VAA_02867 08cbf331b891c6b7cbb2044b15c300f3 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 1.2E-13 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal VAA_02867 08cbf331b891c6b7cbb2044b15c300f3 244 Pfam PF08279 HTH domain 16 57 2.9E-5 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 VAA_02867 08cbf331b891c6b7cbb2044b15c300f3 244 Gene3D G3DSA:1.10.10.10 8 79 2.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02877 b7b631fc5e314e2bd8a7efefc61e8a04 51 Gene3D G3DSA:3.30.70.270 1 51 2.6E-10 T 13-10-2018 VAA_02877 b7b631fc5e314e2bd8a7efefc61e8a04 51 Pfam PF00990 Diguanylate cyclase, GGDEF domain 3 42 1.6E-7 T 13-10-2018 IPR000160 GGDEF domain VAA_02877 b7b631fc5e314e2bd8a7efefc61e8a04 51 SUPERFAMILY SSF55073 4 47 4.55E-10 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 157 1.7E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 Pfam PF00593 TonB dependent receptor 247 697 1.2E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 SUPERFAMILY SSF56935 31 698 3.4E-112 T 13-10-2018 VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 697 2.7E-92 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 Gene3D G3DSA:2.170.130.10 44 166 4.7E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 13-10-2018 IPR010916 TonB box, conserved site VAA_02423 6f3f702bad50afde27a3ac6578c7bb38 698 Gene3D G3DSA:2.40.170.20 167 698 1.1E-114 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAA_01334 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_01334 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_04013 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_04013 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_03931 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_03931 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_03936 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_03936 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_03934 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_03934 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_04042 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_04042 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_03912 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF04986 Putative transposase 158 336 2.4E-51 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_03912 951a4d9f4f9d6416bbc762f042d24297 415 Pfam PF14319 Transposase zinc-binding domain 30 135 5.7E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 SUPERFAMILY SSF51905 5 385 1.11E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 Pfam PF01494 FAD binding domain 5 346 4.0E-29 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 Gene3D G3DSA:3.50.50.60 6 339 6.8E-123 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 4.1E-20 T 13-10-2018 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 4.1E-20 T 13-10-2018 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.1E-20 T 13-10-2018 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.1E-20 T 13-10-2018 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 Gene3D G3DSA:3.30.9.50 80 270 6.8E-123 T 13-10-2018 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VAA_03788 4077e81c1f6c21361af86377d9670f5e 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.1E-135 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VAA_02625 75894a22c936c69c38934895e3c85044 242 Gene3D G3DSA:3.40.30.10 171 242 7.1E-25 T 13-10-2018 VAA_02625 75894a22c936c69c38934895e3c85044 242 Pfam PF08534 Redoxin 5 160 7.1E-34 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VAA_02625 75894a22c936c69c38934895e3c85044 242 SUPERFAMILY SSF52833 4 241 4.7E-49 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_02625 75894a22c936c69c38934895e3c85044 242 Pfam PF00462 Glutaredoxin 173 231 8.7E-20 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAA_02625 75894a22c936c69c38934895e3c85044 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.4E-41 T 13-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VAA_02625 75894a22c936c69c38934895e3c85044 242 PRINTS PR00160 Glutaredoxin signature 228 241 1.5E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_02625 75894a22c936c69c38934895e3c85044 242 PRINTS PR00160 Glutaredoxin signature 173 191 1.5E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_02625 75894a22c936c69c38934895e3c85044 242 PRINTS PR00160 Glutaredoxin signature 214 227 1.5E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_02625 75894a22c936c69c38934895e3c85044 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VAA_02625 75894a22c936c69c38934895e3c85044 242 Gene3D G3DSA:3.40.30.10 4 166 1.5E-62 T 13-10-2018 VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 285 7.8E-63 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 296 2.2E-150 T 13-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 Gene3D G3DSA:3.40.50.1100 12 292 2.6E-110 T 13-10-2018 VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 Gene3D G3DSA:3.40.50.1100 39 144 2.6E-110 T 13-10-2018 VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 296 1.2E-123 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 SUPERFAMILY SSF53686 5 294 6.68E-88 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAA_00698 a2ba1a75b20d1f17523930227612cb6f 297 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VAA_03479 ee15591eee29a5fdd89ddbfeeb01da8f 227 SUPERFAMILY SSF55166 17 175 8.37E-21 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAA_03479 ee15591eee29a5fdd89ddbfeeb01da8f 227 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 176 3.1E-35 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VAA_03479 ee15591eee29a5fdd89ddbfeeb01da8f 227 Gene3D G3DSA:3.30.1380.10 3 185 3.5E-33 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAA_00336 b2a7cdd4824c7ae7c13536007b78346e 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 3.6E-59 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VAA_00336 b2a7cdd4824c7ae7c13536007b78346e 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 8.6E-84 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VAA_00336 b2a7cdd4824c7ae7c13536007b78346e 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 48.175 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VAA_03712 dad92e218196befc8cc364068113e4be 420 SUPERFAMILY SSF53067 198 384 1.68E-44 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 7.2E-151 T 13-10-2018 IPR020823 Cell division protein FtsA VAA_03712 dad92e218196befc8cc364068113e4be 420 Gene3D G3DSA:3.90.640.10 235 300 2.0E-111 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 Gene3D G3DSA:3.30.420.40 197 359 2.0E-111 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 Gene3D G3DSA:3.30.1490.110 87 169 2.0E-111 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 Gene3D G3DSA:3.30.420.40 13 379 2.0E-111 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 Pfam PF14450 Cell division protein FtsA 207 381 2.2E-24 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 PIRSF PIRSF003101 1 420 3.8E-146 T 13-10-2018 IPR020823 Cell division protein FtsA VAA_03712 dad92e218196befc8cc364068113e4be 420 SMART SM00842 10 196 4.7E-95 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VAA_03712 dad92e218196befc8cc364068113e4be 420 SUPERFAMILY SSF53067 8 221 1.09E-58 T 13-10-2018 VAA_03712 dad92e218196befc8cc364068113e4be 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 4.8E-28 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VAA_03712 dad92e218196befc8cc364068113e4be 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.236 T 13-10-2018 IPR020823 Cell division protein FtsA VAA_02888 83b705903345b41980f83b4afe30d53e 254 Pfam PF00455 DeoR C terminal sensor domain 80 233 8.1E-39 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VAA_02888 83b705903345b41980f83b4afe30d53e 254 SMART SM00420 9 61 6.0E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_02888 83b705903345b41980f83b4afe30d53e 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VAA_02888 83b705903345b41980f83b4afe30d53e 254 SMART SM01134 77 235 3.2E-40 T 13-10-2018 VAA_02888 83b705903345b41980f83b4afe30d53e 254 Pfam PF08220 DeoR-like helix-turn-helix domain 9 63 4.5E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_02888 83b705903345b41980f83b4afe30d53e 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 3.1E-5 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_02888 83b705903345b41980f83b4afe30d53e 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 3.1E-5 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_02888 83b705903345b41980f83b4afe30d53e 254 SUPERFAMILY SSF100950 78 237 1.05E-23 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_02888 83b705903345b41980f83b4afe30d53e 254 Gene3D G3DSA:1.10.10.10 2 58 5.5E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02888 83b705903345b41980f83b4afe30d53e 254 SUPERFAMILY SSF46785 8 65 6.12E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03351 74a05488a185aeb4122b641030a023c0 1026 Hamap MF_00970 Ribonuclease E [rne]. 1 1014 34.818 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VAA_03351 74a05488a185aeb4122b641030a023c0 1026 SMART SM00316 37 119 2.6E-11 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_03351 74a05488a185aeb4122b641030a023c0 1026 Gene3D G3DSA:3.40.1260.20 400 507 2.9E-39 T 13-10-2018 VAA_03351 74a05488a185aeb4122b641030a023c0 1026 SUPERFAMILY SSF50249 40 124 2.14E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03351 74a05488a185aeb4122b641030a023c0 1026 Pfam PF10150 Ribonuclease E/G family 121 390 1.3E-93 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VAA_03351 74a05488a185aeb4122b641030a023c0 1026 Gene3D G3DSA:2.40.50.140 32 125 3.3E-32 T 13-10-2018 VAA_03351 74a05488a185aeb4122b641030a023c0 1026 Pfam PF00575 S1 RNA binding domain 37 118 9.4E-14 T 13-10-2018 IPR003029 S1 domain GO:0003676 VAA_03351 74a05488a185aeb4122b641030a023c0 1026 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.1E-170 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 SMART SM00100 2 122 1.2E-26 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 SUPERFAMILY SSF51206 8 137 1.57E-34 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 Gene3D G3DSA:2.60.120.10 10 138 5.6E-43 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 SMART SM00419 160 208 4.2E-17 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02651 2884aa5d303d0fec4f66a8bb948f3b58 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 SUPERFAMILY SSF52540 1 341 2.45E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 356 6.8E-37 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 Gene3D G3DSA:3.40.50.300 8 332 3.0E-81 T 13-10-2018 VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 Gene3D G3DSA:1.20.1050.90 121 298 3.0E-81 T 13-10-2018 VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 97.047 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VAA_00848 6fbb7dfcb6337617e7069329dcebe1d0 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 2.8E-117 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 5.3E-191 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 Pfam PF00271 Helicase conserved C-terminal domain 513 588 5.7E-7 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 Gene3D G3DSA:1.10.8.630 4 113 6.6E-34 T 13-10-2018 VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.298 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 Pfam PF00270 DEAD/DEAH box helicase 204 364 2.9E-14 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 SMART SM00490 492 589 2.3E-10 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 Gene3D G3DSA:3.40.50.300 185 379 6.7E-78 T 13-10-2018 VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 SMART SM00487 196 391 5.4E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 SUPERFAMILY SSF52540 168 379 1.7E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02586 f49a1294bfaae3aea0a2592a96352fa6 733 SUPERFAMILY SSF52540 461 614 1.21E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02023 ca4f1fdb5f51f0b23f49e5e22eb939a4 229 Pfam PF00072 Response regulator receiver domain 6 119 1.5E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02023 ca4f1fdb5f51f0b23f49e5e22eb939a4 229 SMART SM00448 4 119 6.6E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02023 ca4f1fdb5f51f0b23f49e5e22eb939a4 229 Gene3D G3DSA:3.40.50.2300 1 132 3.1E-24 T 13-10-2018 VAA_02023 ca4f1fdb5f51f0b23f49e5e22eb939a4 229 SUPERFAMILY SSF52172 1 173 6.12E-31 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02023 ca4f1fdb5f51f0b23f49e5e22eb939a4 229 PIRSF PIRSF006171 2 229 3.3E-73 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VAA_02023 ca4f1fdb5f51f0b23f49e5e22eb939a4 229 Pfam PF12431 Transcriptional regulator 135 163 4.5E-9 T 13-10-2018 IPR028141 Transcriptional regulator VAA_02314 a870eee3de4eba50299e53c7f12f6b91 299 Gene3D G3DSA:3.20.20.330 1 298 2.8E-66 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VAA_02314 a870eee3de4eba50299e53c7f12f6b91 299 PIRSF PIRSF037505 3 296 4.3E-14 T 13-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 VAA_02314 a870eee3de4eba50299e53c7f12f6b91 299 SUPERFAMILY SSF82282 3 296 4.05E-72 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VAA_02314 a870eee3de4eba50299e53c7f12f6b91 299 Pfam PF02574 Homocysteine S-methyltransferase 6 291 2.5E-53 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 PIRSF PIRSF000130 2 489 2.3E-200 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 SMART SM01240 9 475 0.0 T 13-10-2018 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 1.5E-195 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 SUPERFAMILY SSF51412 3 479 1.83E-123 T 13-10-2018 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 475 1.2E-161 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 SUPERFAMILY SSF54631 97 205 4.42E-26 T 13-10-2018 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 SMART SM00116 98 146 7.7E-12 T 13-10-2018 IPR000644 CBS domain VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 SMART SM00116 160 208 5.1E-5 T 13-10-2018 IPR000644 CBS domain VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 488 83.868 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 Gene3D G3DSA:3.20.20.70 2 488 4.5E-210 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 Pfam PF00571 CBS domain 151 203 1.3E-4 T 13-10-2018 IPR000644 CBS domain VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 Pfam PF00571 CBS domain 98 142 9.9E-10 T 13-10-2018 IPR000644 CBS domain VAA_00501 9e9c734ea7e8c95aaeea3babceb59265 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VAA_01543 29606463fd45c57124d9496600f90a0a 217 SUPERFAMILY SSF46785 90 174 4.62E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01543 29606463fd45c57124d9496600f90a0a 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 35.045 T 13-10-2018 IPR007432 Protein of unknown function DUF480 VAA_01543 29606463fd45c57124d9496600f90a0a 217 SUPERFAMILY SSF46785 3 84 3.54E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01543 29606463fd45c57124d9496600f90a0a 217 Gene3D G3DSA:1.10.10.10 95 175 1.4E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01543 29606463fd45c57124d9496600f90a0a 217 Gene3D G3DSA:1.10.10.10 1 89 1.4E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01543 29606463fd45c57124d9496600f90a0a 217 Pfam PF04337 Protein of unknown function, DUF480 5 158 6.5E-64 T 13-10-2018 IPR007432 Protein of unknown function DUF480 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 102 3.5E-17 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 PIRSF PIRSF006769 1 362 3.1E-116 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 355 1.6E-120 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 357 5.1E-53 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 SUPERFAMILY SSF53927 6 147 2.61E-44 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 Gene3D G3DSA:3.40.140.10 3 138 3.9E-42 T 13-10-2018 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 Gene3D G3DSA:3.40.430.10 139 363 4.6E-62 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 SUPERFAMILY SSF53597 148 357 7.71E-52 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 Pfam PF01872 RibD C-terminal domain 150 354 1.2E-47 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VAA_03589 69378fbbc29d2817cac7d6e006edf287 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:3.30.70.1440 654 848 0.0 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82866 290 489 1.05E-45 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.0E-72 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82866 794 1008 1.11E-48 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.1E-280 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82714 183 266 3.01E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82693 139 324 2.2E-18 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82693 40 134 3.14E-25 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82714 704 788 9.55E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01133 43893254414a878647a08b24070c4e11 1036 SUPERFAMILY SSF82693 554 657 2.93E-15 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 13-10-2018 VAA_01133 43893254414a878647a08b24070c4e11 1036 Gene3D G3DSA:3.30.70.1430 556 653 0.0 T 13-10-2018 VAA_01513 4ea89d9c4536f7f437fbf257f483e967 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.7E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_01513 4ea89d9c4536f7f437fbf257f483e967 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.7E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_01513 4ea89d9c4536f7f437fbf257f483e967 236 SUPERFAMILY SSF46689 7 85 1.28E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01513 4ea89d9c4536f7f437fbf257f483e967 236 Gene3D G3DSA:1.10.357.10 1 203 5.6E-21 T 13-10-2018 VAA_01513 4ea89d9c4536f7f437fbf257f483e967 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 4.2E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Gene3D G3DSA:3.10.560.10 62 252 2.9E-119 T 13-10-2018 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Gene3D G3DSA:3.30.1950.10 86 167 2.9E-119 T 13-10-2018 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Gene3D G3DSA:1.20.5.70 353 386 2.3E-16 T 13-10-2018 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 163 1.7E-27 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Gene3D G3DSA:3.10.560.10 49 350 2.9E-119 T 13-10-2018 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Pfam PF10531 SLBB domain 172 218 4.5E-9 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_02512 bc6c16e4a463df6e6f0efc2159987f4a 386 Pfam PF10531 SLBB domain 254 303 6.6E-6 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Gene3D G3DSA:3.90.230.10 318 611 6.1E-93 T 13-10-2018 VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 SUPERFAMILY SSF55920 321 577 1.15E-55 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Pfam PF00557 Metallopeptidase family M24 328 542 1.3E-42 T 13-10-2018 IPR000994 Peptidase M24 VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Pfam PF01321 Creatinase/Prolidase N-terminal domain 26 155 2.6E-22 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Pfam PF16189 Creatinase/Prolidase N-terminal domain 166 324 7.4E-36 T 13-10-2018 VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 SUPERFAMILY SSF53092 23 148 3.49E-19 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Pfam PF16188 C-terminal region of peptidase_M24 552 610 2.7E-21 T 13-10-2018 IPR032416 Peptidase M24, C-terminal domain VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Gene3D G3DSA:3.40.350.10 165 309 1.8E-24 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VAA_00210 d067a6fbdd54f40f0048ccee64c0abfa 614 Gene3D G3DSA:3.40.350.10 12 164 4.2E-38 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VAA_00727 0f4c0dae182d0c6bc061f0d09ec521eb 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 6.1E-65 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VAA_00727 0f4c0dae182d0c6bc061f0d09ec521eb 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 193 27.353 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VAA_00727 0f4c0dae182d0c6bc061f0d09ec521eb 202 Pfam PF01121 Dephospho-CoA kinase 3 180 1.4E-72 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VAA_00727 0f4c0dae182d0c6bc061f0d09ec521eb 202 SUPERFAMILY SSF52540 1 193 1.29E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00727 0f4c0dae182d0c6bc061f0d09ec521eb 202 Gene3D G3DSA:3.40.50.300 2 200 8.8E-68 T 13-10-2018 VAA_01954 244a94c619449f04a7360c80dac3a270 72 Pfam PF13627 Prokaryotic lipoprotein-attachment site 40 61 1.9E-9 T 13-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site VAA_01884 6a9210eb74a2cd406221b8fc06b16bf7 160 SUPERFAMILY SSF89963 2 86 2.62E-31 T 13-10-2018 IPR036183 YajQ-like superfamily VAA_01884 6a9210eb74a2cd406221b8fc06b16bf7 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.208 T 13-10-2018 IPR007551 Protein of unknown function DUF520 VAA_01884 6a9210eb74a2cd406221b8fc06b16bf7 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.4E-62 T 13-10-2018 IPR007551 Protein of unknown function DUF520 VAA_01884 6a9210eb74a2cd406221b8fc06b16bf7 160 SUPERFAMILY SSF89963 88 160 3.53E-27 T 13-10-2018 IPR036183 YajQ-like superfamily VAA_01884 6a9210eb74a2cd406221b8fc06b16bf7 160 Gene3D G3DSA:3.30.70.990 9 94 1.5E-28 T 13-10-2018 IPR035570 UPF0234, N-terminal VAA_01884 6a9210eb74a2cd406221b8fc06b16bf7 160 Gene3D G3DSA:3.30.70.860 95 160 5.4E-28 T 13-10-2018 IPR035571 UPF0234-like, C-terminal VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 Pfam PF00672 HAMP domain 375 425 3.0E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 Pfam PF02743 Cache domain 49 324 1.0E-15 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 Gene3D G3DSA:1.10.287.950 373 705 1.3E-69 T 13-10-2018 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 Gene3D G3DSA:3.30.450.20 64 334 4.8E-25 T 13-10-2018 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 SUPERFAMILY SSF58104 396 705 1.12E-69 T 13-10-2018 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 SMART SM00304 374 428 6.2E-15 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 515 671 5.7E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 SMART SM00283 443 704 1.2E-62 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03177 a54f0fb6d49d8ee0d41ae9f954d569a6 705 Gene3D G3DSA:3.30.450.20 73 233 4.8E-25 T 13-10-2018 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Gene3D G3DSA:1.10.10.1600 433 510 1.3E-31 T 13-10-2018 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 SUPERFAMILY SSF50249 976 1064 5.36E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 6.9E-26 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 SMART SM00481 7 74 3.5E-24 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 8.1E-10 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Gene3D G3DSA:2.40.50.140 984 1072 7.4E-9 T 13-10-2018 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 735 3.4E-173 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Gene3D G3DSA:3.20.20.140 1 270 2.6E-88 T 13-10-2018 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 SUPERFAMILY SSF89550 5 263 2.75E-11 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VAA_03562 27ae53904f304df3072ee652ca7dd7ce 1159 Pfam PF02811 PHP domain 8 172 2.8E-40 T 13-10-2018 IPR004013 PHP domain GO:0003824 VAA_01497 b9c0a876356384b8df814689c05bd9c5 220 SUPERFAMILY SSF46565 164 218 8.24E-13 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_01497 b9c0a876356384b8df814689c05bd9c5 220 Pfam PF12339 DNA-J related protein 30 151 1.8E-42 T 13-10-2018 IPR021059 DnaJ-related protein, N-terminal VAA_01497 b9c0a876356384b8df814689c05bd9c5 220 Gene3D G3DSA:1.10.287.110 161 220 3.9E-11 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_01497 b9c0a876356384b8df814689c05bd9c5 220 SMART SM00271 166 220 1.3E-6 T 13-10-2018 IPR001623 DnaJ domain VAA_01497 b9c0a876356384b8df814689c05bd9c5 220 Pfam PF00226 DnaJ domain 173 218 2.4E-10 T 13-10-2018 IPR001623 DnaJ domain VAA_01102 4bd663523840febcd0b1467beb1c0496 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 25.583 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 VAA_01102 4bd663523840febcd0b1467beb1c0496 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 3.0E-28 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 VAA_01102 4bd663523840febcd0b1467beb1c0496 92 Gene3D G3DSA:3.30.70.260 6 92 3.9E-32 T 13-10-2018 VAA_01102 4bd663523840febcd0b1467beb1c0496 92 SUPERFAMILY SSF117991 7 92 6.15E-30 T 13-10-2018 IPR027471 YbeD-like domain superfamily VAA_00872 c5750c81624a511016f77e70948322bd 315 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 307 1.1E-133 T 13-10-2018 IPR004482 Mg chelatase-related protein VAA_00872 c5750c81624a511016f77e70948322bd 315 SUPERFAMILY SSF54211 2 169 6.45E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00872 c5750c81624a511016f77e70948322bd 315 Gene3D G3DSA:3.30.230.10 1 168 2.3E-8 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_00872 c5750c81624a511016f77e70948322bd 315 SUPERFAMILY SSF52540 189 307 1.25E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00872 c5750c81624a511016f77e70948322bd 315 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 308 2.5E-53 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain VAA_00872 c5750c81624a511016f77e70948322bd 315 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.0E-48 T 13-10-2018 VAA_00872 c5750c81624a511016f77e70948322bd 315 Gene3D G3DSA:3.40.50.300 184 310 3.4E-24 T 13-10-2018 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.153 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.4E-134 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 Gene3D G3DSA:3.30.420.40 3 315 2.2E-130 T 13-10-2018 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 SUPERFAMILY SSF53067 3 123 1.94E-30 T 13-10-2018 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 Gene3D G3DSA:3.30.420.40 129 293 2.2E-130 T 13-10-2018 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 SUPERFAMILY SSF53067 101 309 2.37E-44 T 13-10-2018 VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 1.4E-123 T 13-10-2018 IPR017861 Kae1/TsaD family VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 Pfam PF00814 Glycoprotease family 24 307 3.2E-103 T 13-10-2018 IPR000905 Gcp-like domain VAA_00682 831b0ef914f0bf44a5135666830f63d2 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VAA_01611 bafc137ce93314cc22635d0826869078 189 SMART SM00867 24 187 4.5E-64 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VAA_01611 bafc137ce93314cc22635d0826869078 189 SUPERFAMILY SSF101874 22 184 9.81E-50 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VAA_01611 bafc137ce93314cc22635d0826869078 189 Gene3D G3DSA:2.40.128.110 23 189 1.6E-49 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VAA_01611 bafc137ce93314cc22635d0826869078 189 Pfam PF04264 YceI-like domain 25 181 7.9E-37 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VAA_03646 34d73f5963734c75306fc886445d1121 313 SUPERFAMILY SSF144083 244 306 1.96E-13 T 13-10-2018 VAA_03646 34d73f5963734c75306fc886445d1121 313 Gene3D G3DSA:3.30.460.20 1 123 2.3E-39 T 13-10-2018 VAA_03646 34d73f5963734c75306fc886445d1121 313 SUPERFAMILY SSF143865 6 231 1.83E-29 T 13-10-2018 VAA_03646 34d73f5963734c75306fc886445d1121 313 Gene3D G3DSA:1.20.58.340 252 309 2.6E-8 T 13-10-2018 VAA_03646 34d73f5963734c75306fc886445d1121 313 Gene3D G3DSA:1.20.58.340 125 249 3.2E-28 T 13-10-2018 VAA_03646 34d73f5963734c75306fc886445d1121 313 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.0E-51 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VAA_01963 57a997e22b17f9cca9f80972ecc1e097 336 SUPERFAMILY SSF53474 35 318 9.4E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01963 57a997e22b17f9cca9f80972ecc1e097 336 Pfam PF12146 Serine aminopeptidase, S33 54 311 2.2E-57 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 VAA_01963 57a997e22b17f9cca9f80972ecc1e097 336 Gene3D G3DSA:3.40.50.1820 26 327 2.0E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 599 38.426 T 13-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 SUPERFAMILY SSF74863 40 154 6.93E-41 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 Pfam PF11412 Disulphide bond corrector protein DsbC 42 152 5.7E-31 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 SUPERFAMILY SSF52833 482 595 4.14E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 Gene3D G3DSA:2.60.40.1250 34 169 5.0E-42 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 ProSitePatterns PS00194 Thioredoxin family active site. 507 525 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 206 406 2.6E-18 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 Gene3D G3DSA:3.40.30.10 473 599 4.6E-33 T 13-10-2018 VAA_02556 4254a5418241483f0ed70e67b0c2d6ca 600 Pfam PF13899 Thioredoxin-like 489 552 1.5E-12 T 13-10-2018 VAA_02390 4c4652ea061dc593de12d1f8dfb996dd 147 SUPERFAMILY SSF51569 3 135 1.71E-37 T 13-10-2018 VAA_02390 4c4652ea061dc593de12d1f8dfb996dd 147 Pfam PF00793 DAHP synthetase I family 9 124 7.9E-27 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_02390 4c4652ea061dc593de12d1f8dfb996dd 147 Gene3D G3DSA:3.20.20.70 1 138 1.3E-46 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 SUPERFAMILY SSF88659 161 240 2.06E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 SUPERFAMILY SSF88946 6 91 1.7E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 PIRSF PIRSF000770 3 243 3.2E-35 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 Gene3D G3DSA:1.20.140.160 90 239 1.1E-44 T 13-10-2018 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 7.9E-84 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 SUPERFAMILY SSF88659 92 165 5.23E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 Pfam PF04539 Sigma-70 region 3 100 171 2.8E-12 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 5.3E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 5.3E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 5.3E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 5.3E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 Pfam PF04542 Sigma-70 region 2 20 91 3.7E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 3.1E-31 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 61.805 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 Pfam PF04545 Sigma-70, region 4 187 234 3.2E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAA_03389 12caac431f3c7d03b2c0fe728f198d78 244 Gene3D G3DSA:1.10.1740.10 4 88 2.5E-27 T 13-10-2018 VAA_02450 a11ea6ac8025042865fd45f291fda8b3 213 Gene3D G3DSA:3.40.50.2020 1 213 1.4E-79 T 13-10-2018 VAA_02450 a11ea6ac8025042865fd45f291fda8b3 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.376 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02450 a11ea6ac8025042865fd45f291fda8b3 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 2.4E-12 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAA_02450 a11ea6ac8025042865fd45f291fda8b3 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 3.5E-70 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02450 a11ea6ac8025042865fd45f291fda8b3 213 SUPERFAMILY SSF53271 2 212 3.69E-50 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_00567 97504db504e6fba61832e0f2bd516193 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 6.2E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_00567 97504db504e6fba61832e0f2bd516193 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 6.2E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_00567 97504db504e6fba61832e0f2bd516193 292 Gene3D G3DSA:1.10.10.2730 246 288 1.2E-15 T 13-10-2018 VAA_00567 97504db504e6fba61832e0f2bd516193 292 Pfam PF12833 Helix-turn-helix domain 211 288 8.0E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_00567 97504db504e6fba61832e0f2bd516193 292 SUPERFAMILY SSF46689 241 290 1.7E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00567 97504db504e6fba61832e0f2bd516193 292 SMART SM00342 204 287 3.7E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_00567 97504db504e6fba61832e0f2bd516193 292 SUPERFAMILY SSF51215 18 174 6.54E-27 T 13-10-2018 IPR037923 Transcription regulator HTH-like VAA_00567 97504db504e6fba61832e0f2bd516193 292 Gene3D G3DSA:1.10.10.60 187 245 1.2E-10 T 13-10-2018 VAA_00567 97504db504e6fba61832e0f2bd516193 292 Gene3D G3DSA:2.60.120.280 17 179 8.6E-58 T 13-10-2018 VAA_00567 97504db504e6fba61832e0f2bd516193 292 Pfam PF02311 AraC-like ligand binding domain 50 148 9.8E-18 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAA_00567 97504db504e6fba61832e0f2bd516193 292 SUPERFAMILY SSF46689 187 237 9.41E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.1E-128 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.8E-61 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Gene3D G3DSA:1.10.1160.10 261 339 6.6E-37 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 SUPERFAMILY SSF50715 340 548 8.37E-79 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Gene3D G3DSA:2.40.240.10 464 548 1.7E-32 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Gene3D G3DSA:2.40.240.10 348 463 3.2E-45 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.171 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Gene3D G3DSA:3.40.50.620 30 247 2.0E-106 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 SUPERFAMILY SSF52374 11 337 5.09E-103 T 13-10-2018 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 Gene3D G3DSA:3.90.800.10 101 209 2.0E-106 T 13-10-2018 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_02099 a1d8652b411006422d0a884c24c57a1d 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.3E-295 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VAA_02641 5f03fcebecac43907f4d1db4d42d5dcc 871 Pfam PF00932 Lamin Tail Domain 25 135 1.4E-13 T 13-10-2018 IPR001322 Lamin tail domain VAA_02641 5f03fcebecac43907f4d1db4d42d5dcc 871 SUPERFAMILY SSF56219 475 847 1.87E-28 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_02641 5f03fcebecac43907f4d1db4d42d5dcc 871 SUPERFAMILY SSF74853 30 133 9.42E-6 T 13-10-2018 IPR036415 Lamin tail domain superfamily VAA_02312 a0722db5118740144b538641e47d654b 593 Gene3D G3DSA:3.20.20.80 1 187 1.7E-22 T 13-10-2018 VAA_02312 a0722db5118740144b538641e47d654b 593 Gene3D G3DSA:3.20.20.80 227 480 1.1E-42 T 13-10-2018 VAA_02312 a0722db5118740144b538641e47d654b 593 Pfam PF00128 Alpha amylase, catalytic domain 43 157 8.0E-12 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02312 a0722db5118740144b538641e47d654b 593 Pfam PF00128 Alpha amylase, catalytic domain 269 427 1.8E-11 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02312 a0722db5118740144b538641e47d654b 593 SMART SM00642 10 457 1.3E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02312 a0722db5118740144b538641e47d654b 593 SUPERFAMILY SSF51445 3 487 9.11E-87 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_00599 f5a459fbd1dee876304c699eb00af2c8 308 Pfam PF05036 Sporulation related domain 68 133 1.4E-5 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAA_00599 f5a459fbd1dee876304c699eb00af2c8 308 SUPERFAMILY SSF110997 67 139 3.14E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 211 5.9E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 SUPERFAMILY SSF52172 2 171 1.71E-23 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 SMART SM00862 139 211 1.4E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 Gene3D G3DSA:3.40.50.2300 1 119 1.9E-26 T 13-10-2018 VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 Pfam PF00072 Response regulator receiver domain 5 111 2.7E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 SUPERFAMILY SSF46894 117 212 6.24E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 Gene3D G3DSA:1.10.10.10 120 216 7.9E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02826 88acb5a46fa48f83d1b71e3c579ed866 217 SMART SM00448 2 110 4.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00495 4acf25a1fdf2d3a1068c1c7cec654b14 293 Pfam PF01235 Sodium:alanine symporter family 1 250 1.0E-76 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_00495 4acf25a1fdf2d3a1068c1c7cec654b14 293 PRINTS PR00175 Sodium/alanine symporter signature 207 227 1.2E-25 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_00495 4acf25a1fdf2d3a1068c1c7cec654b14 293 PRINTS PR00175 Sodium/alanine symporter signature 83 101 1.2E-25 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_00495 4acf25a1fdf2d3a1068c1c7cec654b14 293 PRINTS PR00175 Sodium/alanine symporter signature 144 166 1.2E-25 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Pfam PF08245 Mur ligase middle domain 105 293 2.1E-45 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 SUPERFAMILY SSF53623 101 310 2.35E-51 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Pfam PF01225 Mur ligase family, catalytic domain 24 89 5.7E-10 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 32.969 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 447 1.6E-139 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 389 2.4E-13 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Gene3D G3DSA:3.90.190.20 312 452 8.8E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 SUPERFAMILY SSF53244 313 447 6.1E-33 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Gene3D G3DSA:3.40.1190.10 81 311 3.5E-72 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 SUPERFAMILY SSF63418 1 96 1.1E-26 T 13-10-2018 IPR035911 MurE/MurF, N-terminal VAA_03720 273eee6ad7ba830e8cf34efca056284a 452 Gene3D G3DSA:3.40.1390.10 1 80 2.4E-28 T 13-10-2018 VAA_03003 71b01f86b1d7afc6e45fae7d16fcc60e 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03003 71b01f86b1d7afc6e45fae7d16fcc60e 253 SUPERFAMILY SSF52540 2 226 6.25E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03003 71b01f86b1d7afc6e45fae7d16fcc60e 253 Gene3D G3DSA:3.40.50.300 1 252 4.5E-60 T 13-10-2018 VAA_03003 71b01f86b1d7afc6e45fae7d16fcc60e 253 SMART SM00382 26 213 6.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03003 71b01f86b1d7afc6e45fae7d16fcc60e 253 Pfam PF00005 ABC transporter 22 164 1.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.8E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.8E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.8E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 Pfam PF03466 LysR substrate binding domain 95 295 2.6E-38 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 Gene3D G3DSA:3.40.190.10 167 265 1.1E-59 T 13-10-2018 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 SUPERFAMILY SSF46785 7 89 7.68E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 Gene3D G3DSA:1.10.10.10 11 99 5.9E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 1.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 SUPERFAMILY SSF53850 96 299 1.99E-39 T 13-10-2018 VAA_01159 fa2646a439ccd648d4490ad41a81e0a0 307 Gene3D G3DSA:3.40.190.10 107 292 1.1E-59 T 13-10-2018 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 Gene3D G3DSA:1.10.260.40 7 73 1.0E-16 T 13-10-2018 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 SUPERFAMILY SSF47413 15 73 2.25E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 74 318 1.4E-30 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 13-10-2018 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 SUPERFAMILY SSF53822 73 328 5.78E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 Gene3D G3DSA:3.40.50.2300 171 302 1.5E-69 T 13-10-2018 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 SMART SM00354 15 85 2.5E-27 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 Gene3D G3DSA:3.40.50.2300 77 318 1.5E-69 T 13-10-2018 VAA_03281 c74cc64a650198086ec1ae10e8baaa8a 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 9.8E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 Gene3D G3DSA:3.30.70.1400 29 115 8.9E-40 T 13-10-2018 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 136 6.7E-7 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 Gene3D G3DSA:2.40.30.160 190 312 1.3E-32 T 13-10-2018 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 PIRSF PIRSF006487 21 144 6.0E-6 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 PIRSF PIRSF006487 160 267 0.91 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 SUPERFAMILY SSF101790 237 320 1.83E-17 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.3E-24 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 Gene3D G3DSA:3.30.70.1630 26 187 8.9E-40 T 13-10-2018 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 SUPERFAMILY SSF103025 18 235 3.61E-54 T 13-10-2018 VAA_03785 395a93b12baeedf71a32378ea0262d6e 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 41.616 T 13-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VAA_01989 4149b65ffe5d757269cc7ad6173a3398 414 SUPERFAMILY SSF51735 1 179 2.34E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01989 4149b65ffe5d757269cc7ad6173a3398 414 Gene3D G3DSA:3.30.360.10 159 355 2.3E-140 T 13-10-2018 VAA_01989 4149b65ffe5d757269cc7ad6173a3398 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 393 5.0E-28 T 13-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VAA_01989 4149b65ffe5d757269cc7ad6173a3398 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 145 2.1E-32 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VAA_01989 4149b65ffe5d757269cc7ad6173a3398 414 Gene3D G3DSA:3.40.50.720 4 398 2.3E-140 T 13-10-2018 VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 SUPERFAMILY SSF46785 22 87 1.14E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 SUPERFAMILY SSF64288 69 244 2.67E-37 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 Gene3D G3DSA:1.10.10.10 10 89 1.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 1.0E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 2.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 2.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 SMART SM00345 22 81 8.7E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 Pfam PF07702 UTRA domain 103 239 2.9E-29 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 Gene3D G3DSA:3.40.1410.10 91 246 6.0E-28 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_02814 f9992872f4f89c36c6081aa3e7e62022 250 SMART SM00866 102 241 7.9E-20 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAA_00968 97d962c17dde3ae005fd251a2d56c213 288 SUPERFAMILY SSF50182 96 169 5.56E-10 T 13-10-2018 IPR010920 LSM domain superfamily VAA_00968 97d962c17dde3ae005fd251a2d56c213 288 Pfam PF00924 Mechanosensitive ion channel 61 184 1.3E-15 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAA_01991 0dad34d653670d6b723917a5d873c2a7 389 Pfam PF06965 Na+/H+ antiporter 1 15 381 1.9E-143 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VAA_01991 0dad34d653670d6b723917a5d873c2a7 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 13 387 23.534 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VAA_01991 0dad34d653670d6b723917a5d873c2a7 389 Gene3D G3DSA:1.20.1530.10 11 389 3.3E-146 T 13-10-2018 IPR023171 Na/H antiporter domain superfamily VAA_01991 0dad34d653670d6b723917a5d873c2a7 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 16 381 4.1E-184 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VAA_02330 682686152bcced2e067c6b4fdab68b27 594 Gene3D G3DSA:3.40.50.12780 39 487 4.9E-117 T 13-10-2018 VAA_02330 682686152bcced2e067c6b4fdab68b27 594 SUPERFAMILY SSF56801 29 584 1.57E-148 T 13-10-2018 VAA_02330 682686152bcced2e067c6b4fdab68b27 594 Gene3D G3DSA:3.30.300.310 488 588 3.5E-29 T 13-10-2018 VAA_02330 682686152bcced2e067c6b4fdab68b27 594 Pfam PF13193 AMP-binding enzyme C-terminal domain 500 574 8.2E-17 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02330 682686152bcced2e067c6b4fdab68b27 594 ProSitePatterns PS00455 Putative AMP-binding domain signature. 241 252 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02330 682686152bcced2e067c6b4fdab68b27 594 Pfam PF00501 AMP-binding enzyme 59 491 9.1E-105 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_00404 e5bb0210a52fc149aae39da55aab4fd0 130 Pfam PF00303 Thymidylate synthase 3 130 1.5E-30 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00404 e5bb0210a52fc149aae39da55aab4fd0 130 Gene3D G3DSA:3.30.572.10 1 130 1.0E-35 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00404 e5bb0210a52fc149aae39da55aab4fd0 130 SUPERFAMILY SSF55831 3 130 1.96E-38 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_03739 c5a6ece0fad7f13ddda87f8d3794d1cb 368 SUPERFAMILY SSF52540 62 201 2.48E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03739 c5a6ece0fad7f13ddda87f8d3794d1cb 368 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 368 53.274 T 13-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VAA_03739 c5a6ece0fad7f13ddda87f8d3794d1cb 368 Pfam PF03969 AFG1-like ATPase 1 365 1.8E-158 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VAA_03739 c5a6ece0fad7f13ddda87f8d3794d1cb 368 Gene3D G3DSA:3.40.50.300 8 189 4.4E-20 T 13-10-2018 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 SUPERFAMILY SSF56655 1 259 4.45E-80 T 13-10-2018 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-55 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-55 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.6E-55 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.6E-55 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.6E-55 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.6E-55 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 Pfam PF00459 Inositol monophosphatase family 2 258 6.7E-65 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 Gene3D G3DSA:3.40.190.80 143 266 7.0E-33 T 13-10-2018 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 Gene3D G3DSA:3.30.540.10 1 140 6.6E-52 T 13-10-2018 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.1E-34 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.1E-34 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.1E-34 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAA_00522 deab8d6794f753d38355e56cc1cb4747 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.1E-34 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 SMART SM00448 28 150 0.0088 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 Pfam PF13487 HD domain 391 454 6.0E-18 T 13-10-2018 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 Pfam PF00072 Response regulator receiver domain 30 138 1.6E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 Gene3D G3DSA:3.40.50.2300 17 170 9.8E-16 T 13-10-2018 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 Gene3D G3DSA:1.10.3210.10 316 515 2.3E-67 T 13-10-2018 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 SUPERFAMILY SSF52172 26 160 5.41E-12 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 Pfam PF11849 Domain of unknown function (DUF3369) 150 316 3.2E-42 T 13-10-2018 IPR021800 Domain of unknown function DUF3369 VAA_02984 4d8bbfbc756d75873d9dee4cb41a0e3c 515 SUPERFAMILY SSF109604 324 504 4.4E-37 T 13-10-2018 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 Gene3D G3DSA:1.10.940.10 1 141 4.0E-42 T 13-10-2018 IPR035926 NusB-like superfamily VAA_01771 154ac3b7b306118a53808771aa7ef601 426 Gene3D G3DSA:3.30.70.1170 170 227 3.7E-25 T 13-10-2018 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 Gene3D G3DSA:1.10.287.730 143 169 1.8E-12 T 13-10-2018 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 2.0E-67 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 SUPERFAMILY SSF53335 139 424 1.48E-75 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01771 154ac3b7b306118a53808771aa7ef601 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 9.9E-148 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 Pfam PF01029 NusB family 1 123 1.9E-25 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 Gene3D G3DSA:3.40.50.150 228 425 3.3E-69 T 13-10-2018 VAA_01771 154ac3b7b306118a53808771aa7ef601 426 SUPERFAMILY SSF48013 1 146 2.22E-35 T 13-10-2018 IPR035926 NusB-like superfamily VAA_01771 154ac3b7b306118a53808771aa7ef601 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.7E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01771 154ac3b7b306118a53808771aa7ef601 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.7E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01771 154ac3b7b306118a53808771aa7ef601 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.7E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01771 154ac3b7b306118a53808771aa7ef601 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.7E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01771 154ac3b7b306118a53808771aa7ef601 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.7E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 TIGRFAM TIGR00496 frr: ribosome recycling factor 13 188 4.1E-76 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 Hamap MF_00040 Ribosome-recycling factor [frr]. 6 188 27.413 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 Gene3D G3DSA:3.30.1360.40 38 102 1.2E-27 T 13-10-2018 VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 Gene3D G3DSA:1.10.132.20 103 188 6.1E-28 T 13-10-2018 VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 Pfam PF01765 Ribosome recycling factor 23 186 5.9E-62 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 SUPERFAMILY SSF55194 5 187 4.19E-71 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VAA_03574 6849293355ad5d3a1c7cf582ec5287ad 188 Gene3D G3DSA:1.10.132.20 4 37 2.3E-10 T 13-10-2018 VAA_03143 8e26829e6b0d574cbfbac612e5d54de7 344 SUPERFAMILY SSF53850 47 267 1.12E-29 T 13-10-2018 VAA_03143 8e26829e6b0d574cbfbac612e5d54de7 344 Gene3D G3DSA:3.40.190.10 216 340 3.1E-9 T 13-10-2018 VAA_03143 8e26829e6b0d574cbfbac612e5d54de7 344 Gene3D G3DSA:3.40.190.10 36 135 8.3E-12 T 13-10-2018 VAA_03143 8e26829e6b0d574cbfbac612e5d54de7 344 Gene3D G3DSA:3.40.190.10 136 215 3.3E-12 T 13-10-2018 VAA_03143 8e26829e6b0d574cbfbac612e5d54de7 344 Pfam PF09084 NMT1/THI5 like 61 267 2.6E-19 T 13-10-2018 IPR015168 SsuA/THI5-like VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 Gene3D G3DSA:3.40.47.10 3 230 1.5E-29 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 81 215 2.2E-17 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 SUPERFAMILY SSF53901 191 377 3.58E-46 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 Gene3D G3DSA:3.40.47.10 232 375 4.3E-42 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 230 330 3.6E-28 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 SUPERFAMILY SSF53901 6 216 7.78E-35 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 SMART SM00825 Beta-ketoacyl synthase 42 324 2.0E-9 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VAA_03270 9c11ff48872b099c6b3f530084c3f288 386 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 136 152 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VAA_00070 b82c0996d4946059d516d7e53c1a7aee 241 SUPERFAMILY SSF109604 53 235 3.45E-6 T 13-10-2018 VAA_00070 b82c0996d4946059d516d7e53c1a7aee 241 Pfam PF13286 Phosphohydrolase-associated domain 192 231 9.1E-8 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain VAA_00547 8c9cb552ce29fe7d4152cb1bc0ac202f 240 PIRSF PIRSF005426 1 240 1.1E-82 T 13-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VAA_00547 8c9cb552ce29fe7d4152cb1bc0ac202f 240 Pfam PF00881 Nitroreductase family 8 159 1.1E-21 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VAA_00547 8c9cb552ce29fe7d4152cb1bc0ac202f 240 Gene3D G3DSA:3.40.109.10 1 240 5.9E-75 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAA_00547 8c9cb552ce29fe7d4152cb1bc0ac202f 240 SUPERFAMILY SSF55469 1 238 3.14E-71 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAA_03673 de3094abde1f6580222c4b2142791cee 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 9 259 6.4E-62 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VAA_03673 de3094abde1f6580222c4b2142791cee 262 SUPERFAMILY SSF51556 9 260 5.68E-76 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_03673 de3094abde1f6580222c4b2142791cee 262 Gene3D G3DSA:3.20.20.140 6 261 1.9E-85 T 13-10-2018 VAA_03673 de3094abde1f6580222c4b2142791cee 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 9 17 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAA_03673 de3094abde1f6580222c4b2142791cee 262 Pfam PF01026 TatD related DNase 10 259 4.5E-66 T 13-10-2018 IPR001130 TatD family GO:0016788 VAA_03673 de3094abde1f6580222c4b2142791cee 262 PIRSF PIRSF005902 2 261 2.6E-70 T 13-10-2018 IPR001130 TatD family GO:0016788 VAA_03673 de3094abde1f6580222c4b2142791cee 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 196 212 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 Gene3D G3DSA:3.30.70.20 29 82 7.4E-11 T 13-10-2018 VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 Pfam PF12838 4Fe-4S dicluster domain 35 79 1.6E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 Pfam PF12838 4Fe-4S dicluster domain 106 153 4.0E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.553 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 Gene3D G3DSA:3.30.70.20 95 164 4.6E-11 T 13-10-2018 VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 13 154 6.0E-42 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 SUPERFAMILY SSF54862 32 160 1.37E-21 T 13-10-2018 VAA_01056 5e821a6bd6422bbfb2fa941e5133f1cc 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_02170 6cdadf57a8a67fc9cb7049fa25c44710 215 Pfam PF02613 Nitrate reductase delta subunit 52 181 1.0E-37 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VAA_02170 6cdadf57a8a67fc9cb7049fa25c44710 215 SUPERFAMILY SSF89155 8 213 1.27E-49 T 13-10-2018 IPR036411 TorD-like superfamily VAA_02170 6cdadf57a8a67fc9cb7049fa25c44710 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 33.385 T 13-10-2018 IPR023069 Chaperone TorD VAA_02170 6cdadf57a8a67fc9cb7049fa25c44710 215 Gene3D G3DSA:1.20.1280.20 129 215 8.9E-24 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_02170 6cdadf57a8a67fc9cb7049fa25c44710 215 Gene3D G3DSA:1.20.120.1820 3 126 3.0E-38 T 13-10-2018 VAA_01437 da3fa7e5e46213b96b4feddc868bcc71 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 302 1.3E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_01437 da3fa7e5e46213b96b4feddc868bcc71 328 SMART SM00267 134 306 1.1E-42 T 13-10-2018 IPR000160 GGDEF domain VAA_01437 da3fa7e5e46213b96b4feddc868bcc71 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 305 5.3E-38 T 13-10-2018 IPR000160 GGDEF domain VAA_01437 da3fa7e5e46213b96b4feddc868bcc71 328 Gene3D G3DSA:3.30.70.270 144 315 2.3E-46 T 13-10-2018 VAA_01437 da3fa7e5e46213b96b4feddc868bcc71 328 SUPERFAMILY SSF55073 150 307 5.96E-40 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00604 ee51cd5b7280b88bb69f58d62712dae0 104 SUPERFAMILY SSF47413 6 74 5.35E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00604 ee51cd5b7280b88bb69f58d62712dae0 104 Gene3D G3DSA:1.10.260.40 7 103 1.6E-24 T 13-10-2018 VAA_00604 ee51cd5b7280b88bb69f58d62712dae0 104 Pfam PF12844 Helix-turn-helix domain 10 70 1.6E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00604 ee51cd5b7280b88bb69f58d62712dae0 104 SMART SM00530 10 69 1.2E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.2E-116 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 3.8E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 9.9E-40 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 244 5.6E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 SUPERFAMILY SSF117143 92 223 4.18E-34 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VAA_03517 db9df1570a0636d96f5400cf6f3aac88 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.786 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 Gene3D G3DSA:3.30.230.70 10 236 5.0E-65 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 SUPERFAMILY SSF55666 153 234 4.06E-26 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 SUPERFAMILY SSF54211 1 181 2.23E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.0E-111 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 1.6E-11 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_02449 0e4d0a2edf8931fa5a5466c49c2b8bfb 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.5E-26 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VAA_01665 a1a8201aff2dd618bd99c5d0a96074c6 244 SUPERFAMILY SSF53335 20 241 1.88E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01665 a1a8201aff2dd618bd99c5d0a96074c6 244 Gene3D G3DSA:3.40.50.150 34 244 2.3E-70 T 13-10-2018 VAA_01665 a1a8201aff2dd618bd99c5d0a96074c6 244 Pfam PF02390 Putative methyltransferase 67 237 4.6E-59 T 13-10-2018 VAA_01665 a1a8201aff2dd618bd99c5d0a96074c6 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 28 243 30.102 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VAA_01665 a1a8201aff2dd618bd99c5d0a96074c6 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 243 2.0E-67 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VAA_01457 dc4a8c2bfb3c055f49e8144583ed6511 400 Gene3D G3DSA:1.20.1090.10 204 400 1.0E-59 T 13-10-2018 VAA_01457 dc4a8c2bfb3c055f49e8144583ed6511 400 Gene3D G3DSA:3.40.50.1970 24 203 9.4E-54 T 13-10-2018 VAA_01457 dc4a8c2bfb3c055f49e8144583ed6511 400 SUPERFAMILY SSF56796 29 399 8.24E-112 T 13-10-2018 VAA_01457 dc4a8c2bfb3c055f49e8144583ed6511 400 Pfam PF00465 Iron-containing alcohol dehydrogenase 30 388 9.5E-112 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 PIRSF PIRSF000460 1 817 2.3E-216 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 Gene3D G3DSA:3.40.50.2000 475 797 1.6E-144 T 13-10-2018 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 SUPERFAMILY SSF53756 8 815 0.0 T 13-10-2018 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 Gene3D G3DSA:3.40.50.2000 5 474 2.6E-190 T 13-10-2018 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAA_01939 b70ed8a6058b4e57c2901c3d7127142c 817 Pfam PF00343 Carbohydrate phosphorylase 100 812 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 SUPERFAMILY SSF52402 7 170 1.08E-47 T 13-10-2018 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 Pfam PF00764 Arginosuccinate synthase 10 253 5.7E-90 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 SUPERFAMILY SSF69864 179 252 8.76E-22 T 13-10-2018 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 Gene3D G3DSA:3.40.50.620 7 174 3.4E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02620 234c3838541248cc3814b4541a3d3f62 270 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 245 4.5E-84 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 Gene3D G3DSA:3.90.1260.10 175 257 1.3E-20 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_02620 234c3838541248cc3814b4541a3d3f62 270 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 34 296 1.2E-72 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 34 127 9.5E-24 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 Gene3D G3DSA:1.10.3730.10 193 300 2.5E-34 T 13-10-2018 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 PIRSF PIRSF000193 31 298 5.1E-76 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 Gene3D G3DSA:3.40.50.720 30 192 2.5E-53 T 13-10-2018 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 SUPERFAMILY SSF51735 32 188 7.2E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 191 296 1.6E-29 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 32 296 26.133 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 SUPERFAMILY SSF48179 190 298 2.21E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_01658 9f735f1b5f79a331c1caed96287100ac 300 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 252 274 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 9.2E-130 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 Gene3D G3DSA:3.50.50.60 8 389 3.6E-130 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 Gene3D G3DSA:1.10.8.260 263 323 3.6E-130 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 Pfam PF03486 HI0933-like protein 5 393 3.8E-156 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 Gene3D G3DSA:2.40.30.10 189 340 3.6E-130 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.7E-8 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 5.7E-8 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 5.7E-8 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 SUPERFAMILY SSF51905 1 395 1.59E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 SUPERFAMILY SSF160996 191 339 2.09E-42 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.8E-5 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 4.8E-5 T 13-10-2018 VAA_00557 6125d3c7054eecb4d9a5eefedf14a36a 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.8E-5 T 13-10-2018 VAA_02905 6be099b0d1f7de51ddfd816bf2fefacd 95 Gene3D G3DSA:3.40.630.30 2 94 1.1E-22 T 13-10-2018 VAA_02905 6be099b0d1f7de51ddfd816bf2fefacd 95 SUPERFAMILY SSF55729 3 91 6.6E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02905 6be099b0d1f7de51ddfd816bf2fefacd 95 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 3.6E-22 T 13-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VAA_03908 50dc1244cd81bc2c383deb1cb5db7e35 239 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 185 2.7E-49 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VAA_03908 50dc1244cd81bc2c383deb1cb5db7e35 239 Gene3D G3DSA:3.40.190.170 27 186 5.6E-39 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SUPERFAMILY SSF52172 399 490 7.26E-6 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 526 540 1.8E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 556 568 1.8E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 540 556 1.8E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Gene3D G3DSA:3.40.50.2300 399 510 2.0E-5 T 13-10-2018 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Gene3D G3DSA:1.10.10.10 518 582 3.5E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SMART SM00448 1 118 9.1E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SMART SM00421 523 580 9.4E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SMART SM00052 134 375 7.3E-67 T 13-10-2018 IPR001633 EAL domain VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Pfam PF00563 EAL domain 141 370 1.7E-64 T 13-10-2018 IPR001633 EAL domain VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Pfam PF00196 Bacterial regulatory proteins, luxR family 525 579 6.4E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Gene3D G3DSA:3.40.50.2300 1 132 2.9E-25 T 13-10-2018 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 ProSitePatterns PS00622 LuxR-type HTH domain signature. 540 567 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Gene3D G3DSA:3.20.20.450 139 385 8.3E-72 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SUPERFAMILY SSF52172 1 122 1.71E-25 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SUPERFAMILY SSF46894 517 580 7.48E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 Pfam PF00072 Response regulator receiver domain 3 118 2.5E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03252 584f208bff6f920a841a4ac898b8fa97 592 SUPERFAMILY SSF141868 140 384 4.71E-71 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 19 207 1.8E-102 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 202 5.4E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 Pfam PF08281 Sigma-70, region 4 152 198 8.6E-18 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 Gene3D G3DSA:1.10.1740.10 15 138 1.5E-46 T 13-10-2018 VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 SUPERFAMILY SSF88946 18 124 3.61E-33 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 Gene3D G3DSA:1.10.10.10 139 207 1.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 Pfam PF04542 Sigma-70 region 2 42 109 1.1E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_03781 7808dde9a5cc307c6bf365ed953fde5e 207 SUPERFAMILY SSF88659 141 202 2.24E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 PIRSF PIRSF000398 1 273 4.7E-74 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 Gene3D G3DSA:1.10.1020.10 57 156 1.9E-83 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 SUPERFAMILY SSF53335 5 268 7.2E-76 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 6.5E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 6.5E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 6.5E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 6.5E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 8.0E-71 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 Gene3D G3DSA:3.40.50.150 7 239 1.9E-83 T 13-10-2018 VAA_02636 bfef502d514fb69a1739d7c0bf897754 276 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.6E-94 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.3E-8 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 Gene3D G3DSA:3.40.50.300 2 241 4.6E-71 T 13-10-2018 VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 2.8E-126 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 SUPERFAMILY SSF52540 3 237 1.09E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 Pfam PF00005 ABC transporter 20 166 2.1E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02740 5142a3fa770e7278c8fc370300b4e1c5 241 SMART SM00382 28 202 1.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02276 4f74b81bd7ccc6d4d24b4d80ca50ffa1 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.226 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VAA_02276 4f74b81bd7ccc6d4d24b4d80ca50ffa1 287 Gene3D G3DSA:3.30.2010.10 68 161 6.0E-38 T 13-10-2018 VAA_02276 4f74b81bd7ccc6d4d24b4d80ca50ffa1 287 Pfam PF01435 Peptidase family M48 78 286 4.5E-40 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VAA_01016 08e40d982697935e81746705bc25db22 239 SMART SM00382 38 225 6.7E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01016 08e40d982697935e81746705bc25db22 239 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01016 08e40d982697935e81746705bc25db22 239 Gene3D G3DSA:3.40.50.300 7 239 1.9E-72 T 13-10-2018 VAA_01016 08e40d982697935e81746705bc25db22 239 SUPERFAMILY SSF52540 9 238 2.59E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01016 08e40d982697935e81746705bc25db22 239 Pfam PF00005 ABC transporter 29 177 3.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 205 219 1.2E-21 T 13-10-2018 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 198 1.2E-21 T 13-10-2018 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 339 1.2E-21 T 13-10-2018 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 279 291 1.2E-21 T 13-10-2018 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 Pfam PF02384 N-6 DNA Methylase 159 489 6.8E-101 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 Gene3D G3DSA:1.20.1260.30 8 151 7.2E-38 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 Gene3D G3DSA:3.40.50.150 159 474 3.9E-108 T 13-10-2018 VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 SUPERFAMILY SSF53335 18 493 7.3E-128 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01699 178e201f99bcf4dd68516443cdde30d0 529 Pfam PF12161 HsdM N-terminal domain 20 149 4.4E-22 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 SUPERFAMILY SSF141868 247 495 2.75E-78 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 SUPERFAMILY SSF55073 79 225 2.04E-24 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 SMART SM00267 63 230 3.3E-19 T 13-10-2018 IPR000160 GGDEF domain VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 Pfam PF00990 Diguanylate cyclase, GGDEF domain 75 225 8.7E-25 T 13-10-2018 IPR000160 GGDEF domain VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 Gene3D G3DSA:3.20.20.450 244 494 1.2E-84 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 Gene3D G3DSA:3.30.70.270 69 243 7.1E-29 T 13-10-2018 VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 70 225 2.5E-17 T 13-10-2018 IPR000160 GGDEF domain VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 Pfam PF00563 EAL domain 247 481 5.9E-66 T 13-10-2018 IPR001633 EAL domain VAA_02241 f479363c8f2b3b1501a20baeaa51279a 501 SMART SM00052 240 486 1.8E-82 T 13-10-2018 IPR001633 EAL domain VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Gene3D G3DSA:3.30.499.10 402 529 4.5E-149 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 SUPERFAMILY SSF53732 379 859 1.7E-147 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Gene3D G3DSA:1.25.40.310 1 161 9.3E-71 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 3.7E-65 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Gene3D G3DSA:3.20.19.10 162 361 8.8E-81 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.7E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Gene3D G3DSA:3.30.499.10 683 865 1.4E-71 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 SUPERFAMILY SSF74778 2 160 5.36E-67 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 PIRSF PIRSF036687 1 859 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.0E-99 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 Gene3D G3DSA:3.40.1060.10 385 681 4.5E-149 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAA_00761 cfa73360cebe9fb8795c32e5e3caedb9 865 SUPERFAMILY SSF52016 163 372 2.35E-71 T 13-10-2018 VAA_01823 e2887487b6d5c10a0a133ccf4187a353 344 PIRSF PIRSF002825 7 340 1.1E-65 T 13-10-2018 IPR026045 Ferric binding protein VAA_01823 e2887487b6d5c10a0a133ccf4187a353 344 Gene3D G3DSA:3.40.190.10 134 321 5.5E-117 T 13-10-2018 VAA_01823 e2887487b6d5c10a0a133ccf4187a353 344 Gene3D G3DSA:3.40.190.10 32 307 5.5E-117 T 13-10-2018 VAA_01823 e2887487b6d5c10a0a133ccf4187a353 344 SUPERFAMILY SSF53850 26 326 2.67E-66 T 13-10-2018 VAA_01823 e2887487b6d5c10a0a133ccf4187a353 344 Pfam PF13343 Bacterial extracellular solute-binding protein 90 319 2.4E-31 T 13-10-2018 VAA_00723 982262c0d190a2d953841a45004b6cfc 248 SUPERFAMILY SSF75217 1 245 7.19E-102 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_00723 982262c0d190a2d953841a45004b6cfc 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 117.753 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAA_00723 982262c0d190a2d953841a45004b6cfc 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.1E-70 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAA_00723 982262c0d190a2d953841a45004b6cfc 248 Gene3D G3DSA:1.10.1270.20 161 248 3.3E-33 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAA_00723 982262c0d190a2d953841a45004b6cfc 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 4.9E-109 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAA_00723 982262c0d190a2d953841a45004b6cfc 248 Gene3D G3DSA:3.40.1280.10 1 160 1.1E-67 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_00723 982262c0d190a2d953841a45004b6cfc 248 PIRSF PIRSF000386 1 247 1.2E-101 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VAA_01375 24c7d34716ceccd71dcfc3709a82ee53 504 Gene3D G3DSA:3.20.20.450 251 504 1.3E-83 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01375 24c7d34716ceccd71dcfc3709a82ee53 504 Pfam PF12792 CSS motif domain associated with EAL 53 223 3.8E-21 T 13-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VAA_01375 24c7d34716ceccd71dcfc3709a82ee53 504 SMART SM00052 251 496 5.5E-99 T 13-10-2018 IPR001633 EAL domain VAA_01375 24c7d34716ceccd71dcfc3709a82ee53 504 SUPERFAMILY SSF141868 258 502 4.32E-77 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01375 24c7d34716ceccd71dcfc3709a82ee53 504 Pfam PF00563 EAL domain 258 491 4.6E-63 T 13-10-2018 IPR001633 EAL domain VAA_00015 89d44f38f30753aef879c227640a4901 278 Gene3D G3DSA:3.30.420.10 112 273 4.5E-12 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00015 89d44f38f30753aef879c227640a4901 278 Pfam PF13276 HTH-like domain 37 90 6.1E-8 T 13-10-2018 IPR025948 HTH-like domain VAA_00015 89d44f38f30753aef879c227640a4901 278 SUPERFAMILY SSF53098 107 270 2.15E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00015 89d44f38f30753aef879c227640a4901 278 Pfam PF00665 Integrase core domain 116 229 3.8E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_03556 1ad4d1c99adb8e5b7b815aa24b75be71 284 Gene3D G3DSA:3.60.10.10 64 284 1.9E-19 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_03556 1ad4d1c99adb8e5b7b815aa24b75be71 284 SUPERFAMILY SSF56219 65 284 4.06E-23 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_03556 1ad4d1c99adb8e5b7b815aa24b75be71 284 Hamap MF_01119 UPF0294 protein YafD [yafD]. 5 283 52.906 T 13-10-2018 IPR022958 Uncharacterised protein family UPF0294 VAA_03556 1ad4d1c99adb8e5b7b815aa24b75be71 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 71 275 6.9E-6 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 Gene3D G3DSA:3.40.50.1000 3 263 1.0E-81 T 13-10-2018 IPR023214 HAD superfamily VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 13-10-2018 VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 SUPERFAMILY SSF56784 1 267 1.94E-75 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 Gene3D G3DSA:3.30.1240.10 86 191 1.0E-81 T 13-10-2018 VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.4E-65 T 13-10-2018 VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.9E-26 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VAA_02065 635c8cfe3c6f54995e4adce5cb1a2d0b 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 4.0E-63 T 13-10-2018 IPR000150 Cof family GO:0016787 VAA_00545 360a113ad4b217dbf7305f860838e1b2 466 Pfam PF01136 Peptidase family U32 80 355 1.9E-96 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAA_00545 360a113ad4b217dbf7305f860838e1b2 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAA_00545 360a113ad4b217dbf7305f860838e1b2 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 444 1.6E-20 T 13-10-2018 IPR032525 Peptidase family U32, C-terminal VAA_00545 360a113ad4b217dbf7305f860838e1b2 466 Gene3D G3DSA:2.40.30.10 367 453 1.5E-8 T 13-10-2018 VAA_01412 d659a793f6f7be71b130dca342586021 127 Gene3D G3DSA:3.40.50.12740 6 127 2.3E-40 T 13-10-2018 VAA_01412 d659a793f6f7be71b130dca342586021 127 Pfam PF00072 Response regulator receiver domain 10 121 1.2E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01412 d659a793f6f7be71b130dca342586021 127 SUPERFAMILY SSF52172 8 126 1.71E-37 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01412 d659a793f6f7be71b130dca342586021 127 SMART SM00448 8 121 2.2E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01088 3d4c87512dabb82cf978aec052875e6f 366 Pfam PF02562 PhoH-like protein 120 323 2.1E-93 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 VAA_01088 3d4c87512dabb82cf978aec052875e6f 366 Gene3D G3DSA:3.40.50.300 117 323 2.3E-72 T 13-10-2018 VAA_01088 3d4c87512dabb82cf978aec052875e6f 366 SUPERFAMILY SSF54791 17 77 5.77E-5 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VAA_01088 3d4c87512dabb82cf978aec052875e6f 366 SUPERFAMILY SSF52540 119 320 7.94E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 Pfam PF00330 Aconitase family (aconitate hydratase) 78 541 4.3E-145 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 Gene3D G3DSA:3.30.499.20 11 365 6.2E-130 T 13-10-2018 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 Gene3D G3DSA:1.10.1440.20 570 626 1.6E-9 T 13-10-2018 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 Pfam PF00694 Aconitase C-terminal domain 665 794 2.6E-29 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 Gene3D G3DSA:3.30.499.10 366 569 1.5E-77 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 SUPERFAMILY SSF53732 30 601 8.76E-187 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 Gene3D G3DSA:3.20.19.10 627 869 2.2E-82 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 410 421 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 289 302 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 170 178 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 213 228 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 368 382 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 146 159 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 275 288 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 199 212 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 PRINTS PR00415 Aconitase family signature 472 485 4.3E-25 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 SUPERFAMILY SSF52016 606 868 1.59E-66 T 13-10-2018 VAA_02060 71ff7bdce8c7db4198e0cf7d3a73a9b6 871 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 10 870 0.0 T 13-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VAA_02637 a8072f23b0be377bae598bdd05792090 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAA_02637 a8072f23b0be377bae598bdd05792090 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.4E-90 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAA_02637 a8072f23b0be377bae598bdd05792090 224 SUPERFAMILY SSF51366 4 218 6.53E-76 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02637 a8072f23b0be377bae598bdd05792090 224 PIRSF PIRSF001461 1 224 1.1E-104 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAA_02637 a8072f23b0be377bae598bdd05792090 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAA_02637 a8072f23b0be377bae598bdd05792090 224 Gene3D G3DSA:3.20.20.70 5 222 5.6E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02637 a8072f23b0be377bae598bdd05792090 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 9.8E-99 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PIRSF PIRSF001369 6 375 2.9E-112 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 375 5.7E-160 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PRINTS PR00143 Citrate synthase signature 176 191 2.5E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PRINTS PR00143 Citrate synthase signature 328 342 2.5E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PRINTS PR00143 Citrate synthase signature 198 226 2.5E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PRINTS PR00143 Citrate synthase signature 125 138 2.5E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PRINTS PR00143 Citrate synthase signature 308 324 2.5E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 PRINTS PR00143 Citrate synthase signature 251 271 2.5E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 SUPERFAMILY SSF48256 9 375 6.54E-122 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 Pfam PF00285 Citrate synthase, C-terminal domain 10 357 2.8E-112 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 Gene3D G3DSA:1.10.580.10 31 355 1.3E-116 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VAA_02058 6d6bfd960d24eaca6b9198acd5f8d4bd 375 Gene3D G3DSA:1.10.230.10 224 322 1.3E-116 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VAA_03638 cae43cbd6faa21e1714ae98d5d272347 338 Pfam PF03595 Voltage-dependent anion channel 19 308 7.2E-30 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VAA_03638 cae43cbd6faa21e1714ae98d5d272347 338 Gene3D G3DSA:1.50.10.150 5 318 3.8E-42 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily VAA_03790 c49d9fab8877087fa4220c44b2c9edd1 191 Gene3D G3DSA:1.20.120.740 4 191 3.3E-47 T 13-10-2018 VAA_03790 c49d9fab8877087fa4220c44b2c9edd1 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 32.788 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAA_03790 c49d9fab8877087fa4220c44b2c9edd1 191 SUPERFAMILY SSF101327 7 178 1.57E-43 T 13-10-2018 IPR036255 YgfB-like superfamily VAA_03790 c49d9fab8877087fa4220c44b2c9edd1 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 12 176 3.2E-10 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAA_03790 c49d9fab8877087fa4220c44b2c9edd1 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 178 4.7E-36 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAA_00778 f57b17430c627149835b2405d6a58c24 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 306 6.4E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00778 f57b17430c627149835b2405d6a58c24 341 Gene3D G3DSA:1.10.3720.10 90 299 7.0E-15 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00778 f57b17430c627149835b2405d6a58c24 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 39 4.8E-6 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAA_00778 f57b17430c627149835b2405d6a58c24 341 SUPERFAMILY SSF161098 96 287 1.57E-18 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02080 2c2b0987e2a1f34985a9cacfee21c4ee 235 SUPERFAMILY SSF56214 110 225 7.98E-14 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAA_02080 2c2b0987e2a1f34985a9cacfee21c4ee 235 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 111 191 3.3E-12 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAA_02080 2c2b0987e2a1f34985a9cacfee21c4ee 235 Gene3D G3DSA:3.90.470.20 106 225 6.7E-8 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAA_02080 2c2b0987e2a1f34985a9cacfee21c4ee 235 PRINTS PR01399 Enterobactin synthetase component D signature 152 168 2.7E-10 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VAA_02080 2c2b0987e2a1f34985a9cacfee21c4ee 235 PRINTS PR01399 Enterobactin synthetase component D signature 44 64 2.7E-10 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VAA_01384 0fd73b3f65a2b8dcd6aa289d56119e9d 344 SUPERFAMILY SSF81345 7 338 3.4E-85 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_01384 0fd73b3f65a2b8dcd6aa289d56119e9d 344 Pfam PF01032 FecCD transport family 17 337 2.2E-91 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAA_01384 0fd73b3f65a2b8dcd6aa289d56119e9d 344 Gene3D G3DSA:1.10.3470.10 4 343 2.5E-108 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 SUPERFAMILY SSF53335 3 215 2.3E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 Gene3D G3DSA:3.40.50.150 1 217 6.9E-49 T 13-10-2018 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 178 192 2.8E-22 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 155 177 2.8E-22 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 20 32 2.8E-22 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 66 85 2.8E-22 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 Pfam PF01555 DNA methylase 153 211 2.9E-16 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 Pfam PF01555 DNA methylase 20 139 2.2E-16 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VAA_00196 274617aa1f000f01f78a00b3d06f6385 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_02742 6c971a880ec802036b069c9a369428bf 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 2.4E-43 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VAA_02742 6c971a880ec802036b069c9a369428bf 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.89 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VAA_02742 6c971a880ec802036b069c9a369428bf 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.1E-45 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VAA_02742 6c971a880ec802036b069c9a369428bf 187 PIRSF PIRSF028513 2 185 6.4E-28 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VAA_02742 6c971a880ec802036b069c9a369428bf 187 Gene3D G3DSA:2.60.450.10 59 186 4.3E-35 T 13-10-2018 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 2.1E-56 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 SUPERFAMILY SSF55120 9 248 7.77E-82 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 Gene3D G3DSA:2.30.130.10 249 312 3.6E-23 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 9.4E-20 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 8.7E-87 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.982 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 SUPERFAMILY SSF88697 250 310 6.46E-15 T 13-10-2018 IPR015947 PUA-like superfamily VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 248 2.3E-24 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VAA_00806 5f1f2ce9ed378c86cd5852d5edf491e5 316 Gene3D G3DSA:3.30.2350.10 1 248 1.3E-93 T 13-10-2018 VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 SMART SM00487 22 224 7.8E-57 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 Pfam PF00271 Helicase conserved C-terminal domain 234 341 3.1E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 SMART SM00490 257 341 3.7E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 411 49.923 T 13-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 Gene3D G3DSA:3.40.50.300 1 211 3.8E-71 T 13-10-2018 VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 Pfam PF00270 DEAD/DEAH box helicase 27 194 1.0E-45 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 Gene3D G3DSA:3.40.50.300 217 411 2.9E-49 T 13-10-2018 VAA_00381 f023cb806e57eebb6cfaffc7e71df0e4 411 SUPERFAMILY SSF52540 76 357 7.71E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02437 ca60d0637062b9f82484743805c29f1c 715 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 165 171 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_02437 ca60d0637062b9f82484743805c29f1c 715 Pfam PF01555 DNA methylase 162 519 1.2E-25 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VAA_02437 ca60d0637062b9f82484743805c29f1c 715 SUPERFAMILY SSF53335 138 535 3.89E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 Pfam PF00581 Rhodanese-like domain 180 292 1.2E-9 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 Pfam PF00581 Rhodanese-like domain 31 149 3.9E-15 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 SUPERFAMILY SSF52821 180 300 1.17E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 SMART SM00450 177 297 3.1E-12 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 SMART SM00450 30 153 2.2E-21 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 SUPERFAMILY SSF52821 27 160 3.93E-37 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 Gene3D G3DSA:3.40.250.10 180 301 1.3E-37 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01624 ea2c88ee469c48d4e4ebdd6d7035fd09 301 Gene3D G3DSA:3.40.250.10 25 168 6.3E-42 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 SMART SM00155 126 152 0.0012 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 SMART SM00155 347 374 0.0081 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 SUPERFAMILY SSF56024 248 422 9.16E-26 T 13-10-2018 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 SUPERFAMILY SSF56024 9 187 3.66E-27 T 13-10-2018 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 Gene3D G3DSA:3.30.870.10 12 442 4.1E-166 T 13-10-2018 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 Pfam PF13091 PLD-like domain 251 402 1.7E-25 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 PIRSF PIRSF000850 1 446 2.3E-222 T 13-10-2018 VAA_00051 716acb8ff4fc7f1c0ff932e141d2f987 446 Gene3D G3DSA:3.30.870.10 18 225 4.1E-166 T 13-10-2018 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Gene3D G3DSA:1.20.1640.10 451 606 1.7E-7 T 13-10-2018 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 SUPERFAMILY SSF82866 413 609 1.57E-44 T 13-10-2018 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Gene3D G3DSA:3.30.70.3400 222 440 1.1E-51 T 13-10-2018 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 1.8E-82 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Pfam PF02355 Protein export membrane protein 436 597 2.2E-18 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 1.4E-150 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Gene3D G3DSA:3.30.1360.200 281 434 1.1E-51 T 13-10-2018 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.3E-37 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.995 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 3.6E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_00524 f9858f6269f41dca5685fd3d79c6e57f 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 3.6E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02037 728221f4b73ebe7a0c3d769dd7b1611c 98 SUPERFAMILY SSF52794 2 97 2.96E-35 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAA_02037 728221f4b73ebe7a0c3d769dd7b1611c 98 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 5.1E-34 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VAA_02037 728221f4b73ebe7a0c3d769dd7b1611c 98 Gene3D G3DSA:3.40.50.2300 1 98 2.1E-39 T 13-10-2018 VAA_02037 728221f4b73ebe7a0c3d769dd7b1611c 98 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 9.9E-21 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 Pfam PF13307 Helicase C-terminal domain 538 696 3.5E-34 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 45 702 36.425 T 13-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 SMART SM00491 547 683 1.1E-25 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 Gene3D G3DSA:3.40.50.300 511 702 1.6E-32 T 13-10-2018 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 SUPERFAMILY SSF52540 29 678 2.22E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 Gene3D G3DSA:3.40.50.300 37 321 2.0E-41 T 13-10-2018 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 Pfam PF06733 DEAD_2 210 275 6.6E-6 T 13-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VAA_03173 65f881fda3f4edbd5dfc89db77f5a6cf 703 SUPERFAMILY SSF52540 255 677 6.38E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01767 7e13a611137d7d3b2ad03c203d1b417b 166 SUPERFAMILY SSF102405 86 160 1.01E-14 T 13-10-2018 VAA_01767 7e13a611137d7d3b2ad03c203d1b417b 166 Pfam PF02481 DNA recombination-mediator protein A 74 160 1.9E-27 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VAA_01767 7e13a611137d7d3b2ad03c203d1b417b 166 Gene3D G3DSA:3.40.50.450 1 165 1.0E-33 T 13-10-2018 VAA_02334 754f20c40d61f8026dd15f6af00f4a36 233 SUPERFAMILY SSF53067 111 219 4.27E-26 T 13-10-2018 VAA_02334 754f20c40d61f8026dd15f6af00f4a36 233 Pfam PF00814 Glycoprotease family 30 156 3.4E-31 T 13-10-2018 IPR000905 Gcp-like domain VAA_02334 754f20c40d61f8026dd15f6af00f4a36 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 2.7E-67 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VAA_02334 754f20c40d61f8026dd15f6af00f4a36 233 SUPERFAMILY SSF53067 4 105 1.29E-31 T 13-10-2018 VAA_02334 754f20c40d61f8026dd15f6af00f4a36 233 Gene3D G3DSA:3.30.420.40 5 201 4.1E-81 T 13-10-2018 VAA_02334 754f20c40d61f8026dd15f6af00f4a36 233 Gene3D G3DSA:3.30.420.40 96 190 4.1E-81 T 13-10-2018 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1364 1380 0.01 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1251 1267 0.064 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1328 1344 0.027 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1345 1361 22.0 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 Gene3D G3DSA:2.150.10.10 1308 1445 3.4E-19 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1399 1489 1.2E-5 T 13-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 188 284 3.3E-32 T 13-10-2018 IPR010221 VCBS repeat VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1116 1179 1.1E-4 T 13-10-2018 IPR010221 VCBS repeat VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 PRINTS PR00313 NodO calcium binding signature 1373 1381 2.0E-7 T 13-10-2018 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 PRINTS PR00313 NodO calcium binding signature 1364 1372 2.0E-7 T 13-10-2018 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 PRINTS PR00313 NodO calcium binding signature 1248 1259 2.0E-7 T 13-10-2018 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 PRINTS PR00313 NodO calcium binding signature 1382 1391 2.0E-7 T 13-10-2018 VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 SUPERFAMILY SSF51120 1316 1446 6.41E-21 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VAA_02071 d0a96d31a7acb785e5cf77c565a9b76b 1492 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1360 1378 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VAA_03265 96afc0e778488842b1294df3ea533d3b 514 Gene3D G3DSA:1.20.200.10 204 511 1.7E-101 T 13-10-2018 VAA_03265 96afc0e778488842b1294df3ea533d3b 514 SUPERFAMILY SSF48557 3 512 5.34E-171 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAA_03265 96afc0e778488842b1294df3ea533d3b 514 Gene3D G3DSA:1.10.275.10 10 203 1.8E-56 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VAA_03265 96afc0e778488842b1294df3ea533d3b 514 Pfam PF00221 Aromatic amino acid lyase 16 465 8.6E-163 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VAA_03265 96afc0e778488842b1294df3ea533d3b 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 13-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VAA_00876 172d9b8a9ce859bd46b90b18391e6f6e 454 Gene3D G3DSA:1.10.443.10 187 395 5.1E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00876 172d9b8a9ce859bd46b90b18391e6f6e 454 Pfam PF00589 Phage integrase family 193 336 3.6E-13 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_00876 172d9b8a9ce859bd46b90b18391e6f6e 454 Gene3D G3DSA:1.10.150.130 41 136 2.9E-5 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00876 172d9b8a9ce859bd46b90b18391e6f6e 454 SUPERFAMILY SSF56349 185 338 3.53E-19 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00232 8176585ab05eaef6d3293f80215e15be 307 Pfam PF00882 Zinc dependent phospholipase C 7 186 1.3E-24 T 13-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 VAA_01586 a264031f2b288ee797649375c3087ab5 552 SMART SM00267 117 273 1.2E-4 T 13-10-2018 IPR000160 GGDEF domain VAA_01586 a264031f2b288ee797649375c3087ab5 552 SMART SM00052 289 533 4.4E-57 T 13-10-2018 IPR001633 EAL domain VAA_01586 a264031f2b288ee797649375c3087ab5 552 Gene3D G3DSA:3.40.50.2300 3 126 7.0E-31 T 13-10-2018 VAA_01586 a264031f2b288ee797649375c3087ab5 552 Pfam PF00072 Response regulator receiver domain 7 117 2.5E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01586 a264031f2b288ee797649375c3087ab5 552 Gene3D G3DSA:3.20.20.450 295 549 2.4E-66 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01586 a264031f2b288ee797649375c3087ab5 552 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 236 8.1E-13 T 13-10-2018 IPR000160 GGDEF domain VAA_01586 a264031f2b288ee797649375c3087ab5 552 SUPERFAMILY SSF52172 6 122 7.68E-30 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01586 a264031f2b288ee797649375c3087ab5 552 Gene3D G3DSA:3.30.70.270 127 263 7.8E-14 T 13-10-2018 VAA_01586 a264031f2b288ee797649375c3087ab5 552 Pfam PF00563 EAL domain 298 527 1.1E-55 T 13-10-2018 IPR001633 EAL domain VAA_01586 a264031f2b288ee797649375c3087ab5 552 SMART SM00448 5 117 1.9E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01586 a264031f2b288ee797649375c3087ab5 552 SUPERFAMILY SSF55073 133 239 1.1E-11 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01586 a264031f2b288ee797649375c3087ab5 552 SUPERFAMILY SSF141868 299 540 2.88E-62 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02578 a34026feed1a03d5f6b480d76eb59330 335 Gene3D G3DSA:3.40.190.90 109 276 2.3E-123 T 13-10-2018 VAA_02578 a34026feed1a03d5f6b480d76eb59330 335 Gene3D G3DSA:3.30.540.10 7 319 2.3E-123 T 13-10-2018 VAA_02578 a34026feed1a03d5f6b480d76eb59330 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 5.8E-126 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VAA_02578 a34026feed1a03d5f6b480d76eb59330 335 SUPERFAMILY SSF56655 1 324 8.55E-105 T 13-10-2018 VAA_02578 a34026feed1a03d5f6b480d76eb59330 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 1.9E-166 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VAA_02578 a34026feed1a03d5f6b480d76eb59330 335 PIRSF PIRSF004532 1 331 9.7E-132 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VAA_01881 559fb6e1a6b3efc05dfb3cd8bf0d0153 165 Gene3D G3DSA:3.10.129.10 7 157 6.5E-24 T 13-10-2018 VAA_01881 559fb6e1a6b3efc05dfb3cd8bf0d0153 165 Pfam PF14539 Domain of unknown function (DUF4442) 24 116 4.9E-9 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 VAA_01881 559fb6e1a6b3efc05dfb3cd8bf0d0153 165 SUPERFAMILY SSF54637 18 162 1.31E-14 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03754 f99988742087039afefec90ae8ab0be2 418 SUPERFAMILY SSF58104 109 418 3.14E-75 T 13-10-2018 VAA_03754 f99988742087039afefec90ae8ab0be2 418 Gene3D G3DSA:1.10.287.950 89 418 3.2E-68 T 13-10-2018 VAA_03754 f99988742087039afefec90ae8ab0be2 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03754 f99988742087039afefec90ae8ab0be2 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03754 f99988742087039afefec90ae8ab0be2 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_03754 f99988742087039afefec90ae8ab0be2 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 1.9E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03754 f99988742087039afefec90ae8ab0be2 418 SMART SM00283 156 417 2.7E-70 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 Pfam PF03952 Enolase, N-terminal domain 4 134 5.1E-58 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 Gene3D G3DSA:3.20.20.120 128 433 1.4E-131 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PIRSF PIRSF001400 1 430 6.1E-191 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 8.1E-206 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 SMART SM01193 4 134 7.7E-93 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 Gene3D G3DSA:3.30.390.10 3 127 1.1E-54 T 13-10-2018 IPR029017 Enolase-like, N-terminal VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 SUPERFAMILY SSF51604 143 428 1.7E-125 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 Hamap MF_00318 Enolase [eno]. 2 417 44.261 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.0E-135 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 SUPERFAMILY SSF54826 3 138 1.27E-56 T 13-10-2018 VAA_03764 c242d19f7776ab3f5d2ae2bbf23fa684 433 SMART SM01192 143 431 1.0E-210 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_02106 2cb7b543f25a9b79839e8f21af384d94 166 Pfam PF02357 Transcription termination factor nusG 2 97 1.3E-19 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_02106 2cb7b543f25a9b79839e8f21af384d94 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 44.863 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VAA_02106 2cb7b543f25a9b79839e8f21af384d94 166 Gene3D G3DSA:3.30.70.940 1 164 3.3E-48 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_02106 2cb7b543f25a9b79839e8f21af384d94 166 SMART SM00738 1 101 4.9E-27 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_02106 2cb7b543f25a9b79839e8f21af384d94 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 162 1.2E-60 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VAA_02106 2cb7b543f25a9b79839e8f21af384d94 166 SUPERFAMILY SSF82679 1 99 2.22E-28 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VAA_00126 19d9070212ed8b5bb4de7ad88e5a100e 239 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 3.0E-60 T 13-10-2018 IPR013559 YheO-like VAA_00126 19d9070212ed8b5bb4de7ad88e5a100e 239 Pfam PF08348 YheO-like PAS domain 31 139 3.3E-35 T 13-10-2018 IPR013559 YheO-like VAA_00126 19d9070212ed8b5bb4de7ad88e5a100e 239 Pfam PF13309 HTH domain 174 231 1.7E-18 T 13-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VAA_02884 d49d89b9757936bf5847f17cf2c86a45 230 SUPERFAMILY SSF53639 2 220 8.44E-64 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VAA_02884 d49d89b9757936bf5847f17cf2c86a45 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 3.6E-41 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal VAA_02884 d49d89b9757936bf5847f17cf2c86a45 230 Gene3D G3DSA:3.40.225.10 1 229 3.2E-55 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VAA_02884 d49d89b9757936bf5847f17cf2c86a45 230 SMART SM01007 7 197 3.5E-64 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal VAA_00257 955ec5cdbd2772c8e560d78c9067f2d2 122 Gene3D G3DSA:3.30.70.60 1 92 2.1E-32 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VAA_00257 955ec5cdbd2772c8e560d78c9067f2d2 122 Pfam PF01250 Ribosomal protein S6 3 91 5.7E-28 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00257 955ec5cdbd2772c8e560d78c9067f2d2 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.867 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAA_00257 955ec5cdbd2772c8e560d78c9067f2d2 122 SUPERFAMILY SSF54995 1 103 2.62E-38 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00257 955ec5cdbd2772c8e560d78c9067f2d2 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 3.2E-38 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 Pfam PF13242 HAD-hyrolase-like 107 176 2.5E-13 T 13-10-2018 VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 1.1E-38 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 SUPERFAMILY SSF56784 4 181 3.03E-49 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 Gene3D G3DSA:3.40.50.1000 2 182 1.1E-60 T 13-10-2018 IPR023214 HAD superfamily VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 3.2E-80 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 6.7E-36 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAA_01145 729ce13d919f47bd19ab811c778a2a8f 183 PIRSF PIRSF004682 1 182 3.2E-64 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VAA_03696 e11aafaee1ae0b22c90bc82749772eac 158 Pfam PF07386 Protein of unknown function (DUF1499) 46 151 2.5E-22 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 VAA_03696 e11aafaee1ae0b22c90bc82749772eac 158 PIRSF PIRSF026426 8 158 3.6E-45 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 VAA_02357 d426db8f1ca3dcc99d5d3ef9273bf6c3 372 SMART SM00448 25 136 5.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02357 d426db8f1ca3dcc99d5d3ef9273bf6c3 372 SUPERFAMILY SSF52172 25 143 1.42E-31 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02357 d426db8f1ca3dcc99d5d3ef9273bf6c3 372 Gene3D G3DSA:3.40.50.2300 14 154 4.8E-32 T 13-10-2018 VAA_02357 d426db8f1ca3dcc99d5d3ef9273bf6c3 372 Pfam PF00072 Response regulator receiver domain 27 131 1.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02357 d426db8f1ca3dcc99d5d3ef9273bf6c3 372 Gene3D G3DSA:3.60.40.10 170 348 1.4E-5 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAA_01217 ad828af42765278d8ee28b14e376bc08 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VAA_01217 ad828af42765278d8ee28b14e376bc08 157 Pfam PF04002 RadC-like JAB domain 38 155 2.8E-43 T 13-10-2018 IPR025657 RadC-like JAB domain VAA_01217 ad828af42765278d8ee28b14e376bc08 157 Gene3D G3DSA:3.40.140.10 35 157 7.5E-42 T 13-10-2018 VAA_01217 ad828af42765278d8ee28b14e376bc08 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 157 5.5E-43 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 VAA_01217 ad828af42765278d8ee28b14e376bc08 157 SUPERFAMILY SSF102712 52 126 4.58E-6 T 13-10-2018 VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 Gene3D G3DSA:3.30.565.10 289 443 2.6E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 SUPERFAMILY SSF51206 20 131 3.93E-13 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 2.6E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 Gene3D G3DSA:1.10.287.130 133 236 6.0E-10 T 13-10-2018 VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 SUPERFAMILY SSF55874 293 440 1.7E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 Pfam PF00027 Cyclic nucleotide-binding domain 22 100 3.2E-8 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 SMART SM00387 329 440 1.6E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01442 d92a34db06c29fde56c385fd8e8e17fa 445 Gene3D G3DSA:2.60.120.10 1 132 6.2E-10 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02025 ae6c8249e5a0cc94542d663abdbbda66 99 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 73 7.0E-14 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAA_02025 ae6c8249e5a0cc94542d663abdbbda66 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 1.6E-31 T 13-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VAA_02025 ae6c8249e5a0cc94542d663abdbbda66 99 PIRSF PIRSF002736 1 97 4.3E-35 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAA_02025 ae6c8249e5a0cc94542d663abdbbda66 99 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 91 1.5E-32 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAA_02025 ae6c8249e5a0cc94542d663abdbbda66 99 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 99 24.837 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VAA_03630 4e9d6364499550d29b034989a41ee019 269 Gene3D G3DSA:3.40.50.720 5 269 1.5E-107 T 13-10-2018 VAA_03630 4e9d6364499550d29b034989a41ee019 269 SUPERFAMILY SSF69572 9 268 4.58E-62 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAA_03630 4e9d6364499550d29b034989a41ee019 269 Pfam PF00899 ThiF family 23 263 2.7E-36 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAA_00385 0e9e56997692e550e08095cca0b5b892 134 Gene3D G3DSA:3.40.50.10220 35 134 8.2E-28 T 13-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00385 0e9e56997692e550e08095cca0b5b892 134 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 129 8.0E-4 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00385 0e9e56997692e550e08095cca0b5b892 134 PIRSF PIRSF029225 2 134 4.8E-39 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00385 0e9e56997692e550e08095cca0b5b892 134 SUPERFAMILY SSF102220 33 133 2.62E-25 T 13-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00385 0e9e56997692e550e08095cca0b5b892 134 Pfam PF03603 DNA polymerase III psi subunit 3 131 4.5E-37 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 Gene3D G3DSA:1.20.58.180 215 297 2.5E-34 T 13-10-2018 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 4.6E-150 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.037 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 3.6E-174 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 Gene3D G3DSA:3.30.930.10 1 214 7.2E-111 T 13-10-2018 VAA_00855 38af743b0c99a49a0ff5b95a068525e0 305 SUPERFAMILY SSF55681 8 292 4.57E-135 T 13-10-2018 VAA_3320 59f3901bc5eee9be9b1544f7cfcca582 205 SMART SM00471 37 162 1.5E-7 T 13-10-2018 IPR003607 HD/PDEase domain VAA_3320 59f3901bc5eee9be9b1544f7cfcca582 205 Pfam PF13023 HD domain 22 167 9.3E-14 T 13-10-2018 IPR006674 HD domain VAA_3320 59f3901bc5eee9be9b1544f7cfcca582 205 Gene3D G3DSA:1.10.3210.10 10 205 2.9E-82 T 13-10-2018 VAA_3320 59f3901bc5eee9be9b1544f7cfcca582 205 SUPERFAMILY SSF109604 15 195 1.54E-42 T 13-10-2018 VAA_3320 59f3901bc5eee9be9b1544f7cfcca582 205 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 91 195 2.0E-35 T 13-10-2018 VAA_3320 59f3901bc5eee9be9b1544f7cfcca582 205 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 14 205 45.281 T 13-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VAA_00932 9e17e514852a9ee27082a7bfa27ce087 655 Gene3D G3DSA:3.30.1120.80 280 649 3.4E-144 T 13-10-2018 VAA_00932 9e17e514852a9ee27082a7bfa27ce087 655 Gene3D G3DSA:3.40.720.10 281 573 3.4E-144 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_00932 9e17e514852a9ee27082a7bfa27ce087 655 Pfam PF00884 Sulfatase 290 560 3.2E-41 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAA_00932 9e17e514852a9ee27082a7bfa27ce087 655 SUPERFAMILY SSF53649 288 607 3.66E-66 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_00932 9e17e514852a9ee27082a7bfa27ce087 655 PIRSF PIRSF005091 2 639 9.0E-93 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 4.5E-20 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.4E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 8.7E-10 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 6.7E-119 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Gene3D G3DSA:2.160.10.10 100 309 3.5E-63 T 13-10-2018 VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Gene3D G3DSA:3.40.1390.10 1 99 9.9E-30 T 13-10-2018 VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 SUPERFAMILY SSF51161 32 316 1.36E-83 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_03567 84a549d0cfb8d42751a635ba945dc846 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.955 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 ProSitePatterns PS01125 ROK family signature. 219 246 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 Gene3D G3DSA:3.30.420.40 92 386 5.0E-91 T 13-10-2018 VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 Pfam PF00480 ROK family 88 392 5.8E-73 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 Gene3D G3DSA:1.10.10.10 4 81 2.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 Gene3D G3DSA:3.30.420.40 209 378 5.0E-91 T 13-10-2018 VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 SUPERFAMILY SSF46785 13 77 1.36E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02103 7e8e30640d776851c4f1d053cbf04856 406 SUPERFAMILY SSF53067 87 394 4.38E-54 T 13-10-2018 VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 150 1.8E-21 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 Gene3D G3DSA:3.30.450.90 152 288 4.0E-43 T 13-10-2018 VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 Gene3D G3DSA:3.40.50.300 291 567 1.0E-100 T 13-10-2018 VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 SUPERFAMILY SSF160246 5 147 1.6E-38 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 Pfam PF00437 Type II/IV secretion system protein 193 455 4.4E-77 T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 SMART SM00382 316 437 0.0088 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01730 7b23f595c8bab5ffb3e4429d7f736d6f 576 SUPERFAMILY SSF52540 176 560 1.03E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 1.0E-181 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 219.116 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 4.9E-194 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 SMART SM00788 4 425 0.0 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 Gene3D G3DSA:3.90.170.10 267 432 2.2E-70 T 13-10-2018 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 SUPERFAMILY SSF52540 3 430 7.97E-182 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 Gene3D G3DSA:3.40.440.10 6 249 1.4E-106 T 13-10-2018 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 Gene3D G3DSA:1.10.300.10 102 201 1.4E-106 T 13-10-2018 VAA_02663 101eb0a76b1f9a042aca134b352b1b55 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VAA_02736 331f92a9d70191cd099ec82535ae031f 285 SUPERFAMILY SSF52540 1 152 3.59E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02736 331f92a9d70191cd099ec82535ae031f 285 Gene3D G3DSA:3.40.50.300 1 167 1.7E-6 T 13-10-2018 VAA_02736 331f92a9d70191cd099ec82535ae031f 285 Pfam PF03668 P-loop ATPase protein family 1 284 3.0E-112 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 VAA_02736 331f92a9d70191cd099ec82535ae031f 285 PIRSF PIRSF005052 1 285 1.1E-107 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 VAA_02736 331f92a9d70191cd099ec82535ae031f 285 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 41.212 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.7E-30 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 SUPERFAMILY SSF47831 24 143 4.05E-32 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 3.0E-20 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 1.1E-244 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 PIRSF PIRSF000732 1 574 3.7E-219 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 Gene3D G3DSA:3.50.30.10 4 233 5.2E-79 T 13-10-2018 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 Gene3D G3DSA:1.10.274.10 21 146 5.2E-79 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 SUPERFAMILY SSF52009 125 245 7.46E-35 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 Gene3D G3DSA:3.20.20.60 234 574 3.8E-125 T 13-10-2018 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.2E-30 T 13-10-2018 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.2E-30 T 13-10-2018 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.2E-30 T 13-10-2018 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.2E-30 T 13-10-2018 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 SUPERFAMILY SSF51621 249 549 9.42E-109 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_01084 4c817a45d11c49cf59478d01a3f40f65 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 3.1E-124 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 Gene3D G3DSA:3.40.50.150 20 327 2.4E-97 T 13-10-2018 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 24 492 62.902 T 13-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 59 327 2.1E-103 T 13-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 438 486 1.5E-9 T 13-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 272 5.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 139 149 5.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 206 218 5.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 108 122 5.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 310 327 5.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 26 122 2.2E-27 T 13-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 Gene3D G3DSA:2.30.130.90 328 492 3.3E-64 T 13-10-2018 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 SUPERFAMILY SSF53335 25 327 2.09E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 Pfam PF01189 16S rRNA methyltransferase RsmB/F 137 325 2.4E-49 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VAA_01878 89bf9518d0a377042290c1d7d61d978b 492 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 205 216 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VAA_01663 e8ab74c59c6c76a21b91ac159591aac9 385 SUPERFAMILY SSF102114 5 382 2.62E-106 T 13-10-2018 VAA_01663 e8ab74c59c6c76a21b91ac159591aac9 385 Pfam PF04055 Radical SAM superfamily 11 179 6.6E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_01663 e8ab74c59c6c76a21b91ac159591aac9 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 374 6.2E-139 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VAA_01663 e8ab74c59c6c76a21b91ac159591aac9 385 SMART SM00729 6 227 2.4E-50 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_01663 e8ab74c59c6c76a21b91ac159591aac9 385 Pfam PF06969 HemN C-terminal domain 310 370 1.2E-8 T 13-10-2018 IPR010723 HemN, C-terminal VAA_01663 e8ab74c59c6c76a21b91ac159591aac9 385 Gene3D G3DSA:3.80.30.20 2 299 1.2E-94 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:3.30.70.1430 50 832 1.3E-228 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Pfam PF00873 AcrB/AcrD/AcrF family 22 1048 1.4E-155 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:3.30.2090.10 192 283 1.3E-228 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82866 306 507 2.35E-37 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82693 571 685 3.84E-13 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:3.30.70.1320 146 341 1.3E-228 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82714 197 278 8.24E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82866 824 1050 4.45E-41 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 5.3E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 5.3E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.3E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 5.3E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 PRINTS PR00702 Acriflavin resistance protein family signature 373 394 5.3E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 5.3E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:3.30.2090.10 734 824 1.3E-228 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:3.30.70.1430 575 685 1.3E-228 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:3.30.70.1440 686 896 1.3E-228 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:1.20.1640.10 520 1046 1.3E-228 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 Gene3D G3DSA:1.20.1640.10 25 519 1.3E-228 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82714 735 819 1.31E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82693 50 139 6.1E-19 T 13-10-2018 VAA_01595 9190c54854af52ee5eb06b208abd0203 1051 SUPERFAMILY SSF82693 153 339 2.07E-10 T 13-10-2018 VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 SUPERFAMILY SSF53218 2 205 7.72E-32 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 SMART SM00852 5 172 4.9E-29 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 Gene3D G3DSA:3.40.980.10 1 173 4.6E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 PIRSF PIRSF006728 1 392 6.4E-106 T 13-10-2018 IPR008135 Competence-induced protein CinA VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 95.912 T 13-10-2018 IPR008135 Competence-induced protein CinA VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 Pfam PF00994 Probable molybdopterin binding domain 5 169 3.2E-28 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 398 6.4E-78 T 13-10-2018 IPR008135 Competence-induced protein CinA VAA_01982 ba88478cab91972ce8f13adef5d577f9 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 2.8E-25 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_03286 39beab6607df244406724c8f4f32ba37 233 SUPERFAMILY SSF46894 125 222 1.5E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03286 39beab6607df244406724c8f4f32ba37 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 2.5E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03286 39beab6607df244406724c8f4f32ba37 233 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03286 39beab6607df244406724c8f4f32ba37 233 Gene3D G3DSA:3.40.50.2300 1 122 5.6E-36 T 13-10-2018 VAA_03286 39beab6607df244406724c8f4f32ba37 233 Gene3D G3DSA:1.10.10.10 123 231 1.8E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03286 39beab6607df244406724c8f4f32ba37 233 SUPERFAMILY SSF52172 1 118 2.7E-37 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03286 39beab6607df244406724c8f4f32ba37 233 SMART SM00448 1 112 1.3E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03286 39beab6607df244406724c8f4f32ba37 233 SMART SM00862 146 221 1.1E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 Pfam PF00034 Cytochrome c 25 104 4.6E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 Pfam PF00034 Cytochrome c 117 201 2.1E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 SUPERFAMILY SSF46626 6 104 6.8E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 4.5E-5 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 4.5E-5 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 Gene3D G3DSA:1.10.760.10 109 205 2.7E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 PIRSF PIRSF000005 1 205 8.6E-62 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 Gene3D G3DSA:1.10.760.10 19 108 5.8E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_00580 8b47125e59aeda7e0c7c7b5bfa128deb 205 SUPERFAMILY SSF46626 115 203 7.35E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 SUPERFAMILY SSF64158 78 308 1.96E-81 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.521 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 PIRSF PIRSF001492 1 510 1.0E-202 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 Pfam PF01676 Metalloenzyme superfamily 5 497 2.9E-82 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 Gene3D G3DSA:3.40.720.10 6 507 1.1E-213 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 SUPERFAMILY SSF53649 5 509 7.85E-77 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 1.2E-227 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 Gene3D G3DSA:3.40.1450.10 78 310 1.1E-213 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_00342 23aa8ab37969985909c1226454bbd5ad 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 4.9E-81 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Pfam PF14532 Sigma-54 interaction domain 142 288 3.6E-16 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Gene3D G3DSA:3.40.50.2300 1 131 1.9E-32 T 13-10-2018 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 SMART SM00448 5 116 1.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Gene3D G3DSA:1.10.8.60 288 358 3.7E-16 T 13-10-2018 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 SUPERFAMILY SSF52172 3 185 3.84E-36 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 SUPERFAMILY SSF46689 363 414 4.66E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 SUPERFAMILY SSF52540 140 346 4.3E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Pfam PF00072 Response regulator receiver domain 7 116 3.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Gene3D G3DSA:1.10.10.60 359 416 4.0E-10 T 13-10-2018 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Gene3D G3DSA:3.40.50.300 139 287 2.5E-30 T 13-10-2018 VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 330 339 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_01566 064bbdb48bddd5bf2e48a966295a4388 422 Pfam PF02954 Bacterial regulatory protein, Fis family 372 411 6.6E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 4.1E-20 T 13-10-2018 IPR003004 GspF/PilC family VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 4.1E-20 T 13-10-2018 IPR003004 GspF/PilC family VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 4.1E-20 T 13-10-2018 IPR003004 GspF/PilC family VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 4.1E-20 T 13-10-2018 IPR003004 GspF/PilC family VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 Gene3D G3DSA:1.20.81.30 59 175 4.4E-29 T 13-10-2018 VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 Gene3D G3DSA:1.20.81.30 260 371 1.4E-26 T 13-10-2018 VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 5.1E-32 T 13-10-2018 IPR018076 Type II secretion system F domain VAA_00729 a5b966638ad3a4aa618b2fdb64f0b824 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 1.5E-27 T 13-10-2018 IPR018076 Type II secretion system F domain VAA_01904 a1ce79f88381f801d8fccc49104ebd1e 154 SMART SM00260 1 139 5.9E-26 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01904 a1ce79f88381f801d8fccc49104ebd1e 154 SUPERFAMILY SSF50341 3 140 5.23E-34 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01904 a1ce79f88381f801d8fccc49104ebd1e 154 Gene3D G3DSA:2.30.30.40 8 133 4.1E-35 T 13-10-2018 VAA_01904 a1ce79f88381f801d8fccc49104ebd1e 154 Pfam PF01584 CheW-like domain 5 139 8.8E-30 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01904 a1ce79f88381f801d8fccc49104ebd1e 154 Gene3D G3DSA:2.40.50.180 24 134 4.1E-35 T 13-10-2018 VAA_02986 2933ca3e62da3797d471160d1823e330 322 Gene3D G3DSA:3.40.50.2300 65 297 9.9E-15 T 13-10-2018 VAA_02986 2933ca3e62da3797d471160d1823e330 322 Gene3D G3DSA:3.40.50.2300 134 318 9.9E-15 T 13-10-2018 VAA_02125 6d92724ffe78096a8341ec591e8bafd5 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 5.9E-25 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02125 6d92724ffe78096a8341ec591e8bafd5 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 2.0E-106 T 13-10-2018 IPR006508 Pseudouridine synthase, RluA-like VAA_02125 6d92724ffe78096a8341ec591e8bafd5 231 Gene3D G3DSA:3.30.2350.10 1 192 5.0E-48 T 13-10-2018 VAA_02125 6d92724ffe78096a8341ec591e8bafd5 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02125 6d92724ffe78096a8341ec591e8bafd5 231 SUPERFAMILY SSF55120 2 196 2.3E-45 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_03609 8a86f440afafc71ddf2cfbe7a671db92 335 PIRSF PIRSF006268 1 334 6.2E-92 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VAA_03609 8a86f440afafc71ddf2cfbe7a671db92 335 SUPERFAMILY SSF143631 23 332 1.07E-99 T 13-10-2018 IPR003374 ApbE-like superfamily VAA_03609 8a86f440afafc71ddf2cfbe7a671db92 335 Gene3D G3DSA:3.10.520.20 15 335 2.0E-110 T 13-10-2018 VAA_03609 8a86f440afafc71ddf2cfbe7a671db92 335 Pfam PF02424 ApbE family 31 310 2.7E-82 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VAA_02365 2bbe9904a0e66439ec8ba4c22fbce0e1 431 SUPERFAMILY SSF56935 34 431 5.49E-88 T 13-10-2018 VAA_02365 2bbe9904a0e66439ec8ba4c22fbce0e1 431 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 25 431 2.9E-124 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA_02365 2bbe9904a0e66439ec8ba4c22fbce0e1 431 Gene3D G3DSA:2.40.160.60 34 431 1.8E-112 T 13-10-2018 VAA_00406 a3b91da78b4eb1219e0221da2fa6a65c 316 SUPERFAMILY SSF53850 110 308 4.34E-24 T 13-10-2018 VAA_00406 a3b91da78b4eb1219e0221da2fa6a65c 316 Pfam PF03466 LysR substrate binding domain 116 308 3.5E-12 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00406 a3b91da78b4eb1219e0221da2fa6a65c 316 SUPERFAMILY SSF46785 20 105 1.25E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00406 a3b91da78b4eb1219e0221da2fa6a65c 316 Gene3D G3DSA:1.10.10.10 24 112 2.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00406 a3b91da78b4eb1219e0221da2fa6a65c 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 85 1.3E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00406 a3b91da78b4eb1219e0221da2fa6a65c 316 Gene3D G3DSA:3.40.190.290 115 311 7.7E-9 T 13-10-2018 VAA_02231 9a04cf5605f8263bd47cb553ceb732f6 676 Gene3D G3DSA:1.25.40.10 68 395 3.8E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02231 9a04cf5605f8263bd47cb553ceb732f6 676 Pfam PF00990 Diguanylate cyclase, GGDEF domain 527 667 6.4E-40 T 13-10-2018 IPR000160 GGDEF domain VAA_02231 9a04cf5605f8263bd47cb553ceb732f6 676 SUPERFAMILY SSF48452 142 297 5.03E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02231 9a04cf5605f8263bd47cb553ceb732f6 676 SMART SM00267 452 672 4.0E-38 T 13-10-2018 IPR000160 GGDEF domain VAA_02231 9a04cf5605f8263bd47cb553ceb732f6 676 SUPERFAMILY SSF55073 532 669 2.04E-38 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02231 9a04cf5605f8263bd47cb553ceb732f6 676 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 530 670 1.4E-43 T 13-10-2018 IPR000160 GGDEF domain VAA_00460 cf742b910054624db0ab9836c152303a 272 Pfam PF04072 Leucine carboxyl methyltransferase 72 131 3.8E-6 T 13-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VAA_00460 cf742b910054624db0ab9836c152303a 272 SUPERFAMILY SSF53335 20 258 8.31E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00460 cf742b910054624db0ab9836c152303a 272 PIRSF PIRSF028177 6 272 2.2E-72 T 13-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VAA_00460 cf742b910054624db0ab9836c152303a 272 Gene3D G3DSA:3.40.50.150 13 257 1.3E-20 T 13-10-2018 VAA_02157 d37fde60608ad551643b8bbfcca105d4 544 Pfam PF05925 Enterobacterial virulence protein IpgD 125 542 7.9E-120 T 13-10-2018 IPR008108 Phosphatase IpgD/SopB GO:0009405|GO:0016791 VAA_02090 a98554651352057dd13051cb76e16210 240 Pfam PF00929 Exonuclease 41 216 8.0E-44 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_02090 a98554651352057dd13051cb76e16210 240 SMART SM00479 39 225 6.4E-30 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_02090 a98554651352057dd13051cb76e16210 240 SUPERFAMILY SSF53098 31 229 1.42E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_02090 a98554651352057dd13051cb76e16210 240 Hamap MF_00157 Ribonuclease T [rnt]. 1 240 118.736 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VAA_02090 a98554651352057dd13051cb76e16210 240 TIGRFAM TIGR01298 RNaseT: ribonuclease T 31 230 4.2E-99 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VAA_02090 a98554651352057dd13051cb76e16210 240 Gene3D G3DSA:3.30.420.10 30 237 3.3E-54 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_02553 e198ed5b849135a1ed5ece939a6986e0 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 4.4E-34 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted VAA_02553 e198ed5b849135a1ed5ece939a6986e0 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 8.7E-35 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted VAA_01064 ac150e464261502a930b2c63079e14bf 298 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 45 295 5.1E-62 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 VAA_01064 ac150e464261502a930b2c63079e14bf 298 Gene3D G3DSA:3.40.190.10 51 294 7.8E-77 T 13-10-2018 VAA_01064 ac150e464261502a930b2c63079e14bf 298 Pfam PF12727 PBP superfamily domain 65 256 3.8E-36 T 13-10-2018 IPR024370 PBP domain VAA_01064 ac150e464261502a930b2c63079e14bf 298 Gene3D G3DSA:3.40.190.10 122 256 7.8E-77 T 13-10-2018 VAA_01064 ac150e464261502a930b2c63079e14bf 298 SUPERFAMILY SSF53850 49 295 2.08E-63 T 13-10-2018 VAA_03498 ed8dde48c021aabdeaa0b7d796f7670c 288 Gene3D G3DSA:3.20.20.70 3 288 2.3E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03498 ed8dde48c021aabdeaa0b7d796f7670c 288 Pfam PF00793 DAHP synthetase I family 15 280 2.3E-68 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_03498 ed8dde48c021aabdeaa0b7d796f7670c 288 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 18 282 48.113 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_03498 ed8dde48c021aabdeaa0b7d796f7670c 288 SUPERFAMILY SSF51569 7 284 5.86E-104 T 13-10-2018 VAA_03498 ed8dde48c021aabdeaa0b7d796f7670c 288 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 23 280 7.9E-116 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PIRSF PIRSF000350 2 449 7.5E-83 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.1E-63 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 5.7E-29 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.7E-29 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.7E-29 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 5.7E-29 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 5.7E-29 T 13-10-2018 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 Gene3D G3DSA:3.30.390.30 343 454 5.5E-46 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 SUPERFAMILY SSF55424 341 454 2.75E-34 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 Gene3D G3DSA:3.50.50.60 9 319 9.0E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 Gene3D G3DSA:3.50.50.60 148 265 9.0E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 323 4.6E-69 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 SUPERFAMILY SSF51905 4 370 6.26E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 453 1.7E-32 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 8 454 6.0E-210 T 13-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VAA_02408 c3a9338ba47ba2a1ee466bcc8f36c5c6 454 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VAA_02775 c0935ef0c78546fde24ba52fd4d7c3d8 173 Pfam PF06271 RDD family 23 163 5.4E-17 T 13-10-2018 IPR010432 RDD VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 Gene3D G3DSA:3.90.226.10 25 285 4.2E-82 T 13-10-2018 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 SUPERFAMILY SSF52096 25 282 1.52E-83 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 6.1E-139 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.087 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.2E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.2E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.2E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.2E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.2E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_02096 48eaa30ca10a1b52f2fa06fbdc26b22b 308 Pfam PF01039 Carboxyl transferase domain 100 239 3.4E-14 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VAA_02728 8986045788aba7ec84907225346a56af 209 Pfam PF02441 Flavoprotein 7 182 2.2E-25 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VAA_02728 8986045788aba7ec84907225346a56af 209 SUPERFAMILY SSF52507 6 202 2.62E-56 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAA_02728 8986045788aba7ec84907225346a56af 209 Gene3D G3DSA:3.40.50.1950 1 204 4.7E-77 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAA_02728 8986045788aba7ec84907225346a56af 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 35.196 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VAA_02728 8986045788aba7ec84907225346a56af 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 1.8E-57 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 333 4.3E-191 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 Gene3D G3DSA:3.30.360.10 159 323 5.5E-128 T 13-10-2018 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 PIRSF PIRSF000149 1 342 9.1E-127 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 Gene3D G3DSA:3.40.50.720 4 333 5.5E-128 T 13-10-2018 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 110 5.1E-31 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 SMART SM00846 3 160 3.3E-71 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 117 130 2.1E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 237 254 2.1E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 154 172 2.1E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 181 197 2.1E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 277 292 2.1E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 SUPERFAMILY SSF51735 1 186 3.21E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 165 321 3.3E-55 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 SUPERFAMILY SSF55347 160 322 4.17E-58 T 13-10-2018 VAA_00186 aac36b07ff7fb6e06af9c2dc77cff953 342 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 342 65.518 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 Gene3D G3DSA:1.10.287.950 212 543 1.3E-73 T 13-10-2018 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 SMART SM00304 212 266 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 SUPERFAMILY SSF58104 241 543 3.79E-70 T 13-10-2018 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 508 2.2E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 1.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 1.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 1.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 SMART SM00283 281 542 1.7E-67 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01373 ed1679423e9d5a8d4831cc2372290748 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 172 2.6E-18 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAA_00544 d7bdf07f22397c8c7bc128663019abd8 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 4.8E-125 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VAA_00544 d7bdf07f22397c8c7bc128663019abd8 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.535 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VAA_00374 1bd54c3c1963e1296324f4777db4b986 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.3E-72 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain VAA_00374 1bd54c3c1963e1296324f4777db4b986 344 SUPERFAMILY SSF51430 1 344 2.1E-108 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAA_00374 1bd54c3c1963e1296324f4777db4b986 344 Gene3D G3DSA:3.20.20.100 1 344 1.6E-131 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAA_01299 0028bd9cf61df604707b5ce8d0703266 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 304 1.4E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01299 0028bd9cf61df604707b5ce8d0703266 310 Gene3D G3DSA:1.10.3720.10 87 310 4.3E-31 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01299 0028bd9cf61df604707b5ce8d0703266 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 2.6E-90 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VAA_01299 0028bd9cf61df604707b5ce8d0703266 310 SUPERFAMILY SSF161098 34 304 1.21E-34 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 39 728 2.5E-152 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 164 1.6E-26 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 40 728 1.1E-162 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 SUPERFAMILY SSF56935 42 728 3.66E-116 T 13-10-2018 VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 Pfam PF00593 TonB dependent receptor 250 726 1.0E-57 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 711 728 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 Gene3D G3DSA:2.170.130.10 39 169 4.6E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VAA_01392 fc171c48c47fd7afad8919ee3bc3b657 728 Gene3D G3DSA:2.40.170.20 182 728 8.7E-112 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VAA_03442 13cd13a9be47d09d8e8b7850841c9d9e 176 Gene3D G3DSA:3.30.1370.110 49 175 3.8E-28 T 13-10-2018 VAA_03442 13cd13a9be47d09d8e8b7850841c9d9e 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 38.182 T 13-10-2018 IPR022990 Uncharacterised protein family UPF0115 VAA_03442 13cd13a9be47d09d8e8b7850841c9d9e 176 SUPERFAMILY SSF160443 95 171 4.32E-12 T 13-10-2018 IPR036063 Smr domain superfamily VAA_03442 13cd13a9be47d09d8e8b7850841c9d9e 176 Pfam PF01713 Smr domain 97 171 1.0E-18 T 13-10-2018 IPR002625 Smr domain VAA_03442 13cd13a9be47d09d8e8b7850841c9d9e 176 SMART SM00463 94 172 2.8E-17 T 13-10-2018 IPR002625 Smr domain VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 Gene3D G3DSA:3.30.1330.60 176 292 3.9E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 Pfam PF00691 OmpA family 187 282 2.4E-18 T 13-10-2018 IPR006665 OmpA-like domain VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 Gene3D G3DSA:2.60.40.2540 22 175 4.7E-58 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 9.0E-148 T 13-10-2018 VAA_02089 32ee833181e352f7bc3e7eee506129f7 293 SUPERFAMILY SSF103088 158 287 2.49E-27 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 SMART SM00411 1 90 1.7E-44 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.1E-33 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 Gene3D G3DSA:4.10.520.10 1 90 4.0E-37 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 SUPERFAMILY SSF47729 1 90 2.06E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02532 0511c18c2641e19dd18c134d9f6bb5ab 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 Gene3D G3DSA:3.40.1190.10 102 306 3.8E-64 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 441 1.1E-130 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 Gene3D G3DSA:3.90.190.20 307 440 1.3E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 SUPERFAMILY SSF53623 103 304 6.67E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 SUPERFAMILY SSF51984 13 102 7.32E-18 T 13-10-2018 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 SUPERFAMILY SSF53244 306 442 1.33E-41 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 Gene3D G3DSA:3.40.50.720 11 101 2.4E-20 T 13-10-2018 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 Pfam PF08245 Mur ligase middle domain 118 286 3.4E-26 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 13 443 32.946 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_03718 503eca464bc893ab71d5e1bc21c3b28a 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 380 5.5E-7 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VAA_01688 4b81f4443d0a72dd07824bc6de1a0a2b 333 Gene3D G3DSA:3.40.190.10 128 266 2.1E-111 T 13-10-2018 VAA_01688 4b81f4443d0a72dd07824bc6de1a0a2b 333 Pfam PF16868 NMT1-like family 41 330 1.1E-96 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VAA_01688 4b81f4443d0a72dd07824bc6de1a0a2b 333 SUPERFAMILY SSF53850 36 332 6.96E-90 T 13-10-2018 VAA_01688 4b81f4443d0a72dd07824bc6de1a0a2b 333 Gene3D G3DSA:3.40.190.10 41 330 2.1E-111 T 13-10-2018 VAA_01688 4b81f4443d0a72dd07824bc6de1a0a2b 333 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 18 330 1.4E-114 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 Gene3D G3DSA:3.20.20.80 5 377 8.4E-76 T 13-10-2018 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 SMART SM00642 8 372 7.3E-23 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 SUPERFAMILY SSF51445 8 359 1.99E-58 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 PRINTS PR00110 Alpha-amylase signature 294 306 4.8E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 PRINTS PR00110 Alpha-amylase signature 199 210 4.8E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 PRINTS PR00110 Alpha-amylase signature 86 97 4.8E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 PRINTS PR00110 Alpha-amylase signature 228 246 4.8E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 PRINTS PR00110 Alpha-amylase signature 53 70 4.8E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VAA_00917 222dea8d7aa3d47c562beb6f3190fcf2 455 Pfam PF00128 Alpha amylase, catalytic domain 28 224 2.1E-18 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_00207 60382ad0f1b3695a3c6d1d35c9413c71 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 1.4E-15 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis VAA_00207 60382ad0f1b3695a3c6d1d35c9413c71 69 Pfam PF02597 ThiS family 7 69 4.3E-11 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VAA_00207 60382ad0f1b3695a3c6d1d35c9413c71 69 SUPERFAMILY SSF54285 4 69 3.63E-15 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VAA_00207 60382ad0f1b3695a3c6d1d35c9413c71 69 Gene3D G3DSA:3.10.20.30 4 69 1.5E-17 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 Pfam PF01235 Sodium:alanine symporter family 48 452 4.6E-162 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 PRINTS PR00175 Sodium/alanine symporter signature 87 109 8.7E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 PRINTS PR00175 Sodium/alanine symporter signature 410 430 8.7E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 PRINTS PR00175 Sodium/alanine symporter signature 178 196 8.7E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 PRINTS PR00175 Sodium/alanine symporter signature 206 225 8.7E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 PRINTS PR00175 Sodium/alanine symporter signature 349 371 8.7E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 PRINTS PR00175 Sodium/alanine symporter signature 303 321 8.7E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03676 faeeadd436c28d151d1ee8e7aacef82b 474 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.0E-163 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_02311 e808da9ff826f7c88c55c574b001171d 430 Pfam PF00271 Helicase conserved C-terminal domain 250 356 6.7E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02311 e808da9ff826f7c88c55c574b001171d 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 170 178 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_02311 e808da9ff826f7c88c55c574b001171d 430 Gene3D G3DSA:3.40.50.300 15 227 7.7E-79 T 13-10-2018 VAA_02311 e808da9ff826f7c88c55c574b001171d 430 Gene3D G3DSA:3.40.50.300 230 393 1.2E-45 T 13-10-2018 VAA_02311 e808da9ff826f7c88c55c574b001171d 430 Pfam PF00270 DEAD/DEAH box helicase 43 212 2.3E-52 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_02311 e808da9ff826f7c88c55c574b001171d 430 SMART SM00487 38 239 2.1E-64 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_02311 e808da9ff826f7c88c55c574b001171d 430 SUPERFAMILY SSF52540 91 377 4.08E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02311 e808da9ff826f7c88c55c574b001171d 430 SMART SM00490 275 356 1.9E-31 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 Pfam PF00072 Response regulator receiver domain 9 116 1.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 Gene3D G3DSA:3.40.50.2300 2 151 2.0E-30 T 13-10-2018 VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 SMART SM00850 165 262 1.1E-19 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 SUPERFAMILY SSF52172 7 156 8.54E-30 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 SMART SM00448 6 118 3.0E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 Pfam PF04397 LytTr DNA-binding domain 166 261 7.6E-23 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VAA_02947 6a41d60cda04869d1e2e6d156602af5d 262 Gene3D G3DSA:2.40.50.40 156 228 9.4E-10 T 13-10-2018 VAA_00278 d21c597fa00c2e8f12a1af4afa525a09 246 SUPERFAMILY SSF52540 72 241 5.2E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00278 d21c597fa00c2e8f12a1af4afa525a09 246 PIRSF PIRSF003073 1 246 1.3E-63 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein VAA_00278 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF01695 IstB-like ATP binding protein 54 229 4.0E-57 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 VAA_00278 d21c597fa00c2e8f12a1af4afa525a09 246 Pfam PF08483 IstB-like ATP binding N-terminal 23 50 1.3E-9 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal VAA_00278 d21c597fa00c2e8f12a1af4afa525a09 246 SMART SM00382 97 228 0.0012 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00278 d21c597fa00c2e8f12a1af4afa525a09 246 Gene3D G3DSA:3.40.50.300 60 243 8.5E-44 T 13-10-2018 VAA_01684 3fb8f2659e88102d1a1e8f0235c79571 468 Gene3D G3DSA:1.20.1740.10 1 448 1.7E-58 T 13-10-2018 VAA_01684 3fb8f2659e88102d1a1e8f0235c79571 468 Pfam PF13520 Amino acid permease 5 411 1.6E-68 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAA_01684 3fb8f2659e88102d1a1e8f0235c79571 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 2.1E-166 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VAA_01684 3fb8f2659e88102d1a1e8f0235c79571 468 PIRSF PIRSF006060 1 467 4.2E-45 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.498 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Gene3D G3DSA:1.10.10.160 108 181 1.2E-98 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 5.4E-76 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 2.2E-73 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Gene3D G3DSA:3.40.50.300 4 266 1.2E-98 T 13-10-2018 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 SUPERFAMILY SSF52540 1 639 1.09E-161 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Gene3D G3DSA:1.10.486.10 377 546 1.3E-123 T 13-10-2018 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 Gene3D G3DSA:3.40.50.300 274 634 1.3E-123 T 13-10-2018 VAA_00591 f298757a231ed30485dd6d35afdcc673 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VAA_01185 f064f40dbabe3e26bc629561a820c183 178 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 20 161 45.792 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VAA_01185 f064f40dbabe3e26bc629561a820c183 178 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 65 102 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAA_01185 f064f40dbabe3e26bc629561a820c183 178 Pfam PF14437 MafB19-like deaminase 15 161 1.7E-34 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VAA_01185 f064f40dbabe3e26bc629561a820c183 178 Gene3D G3DSA:3.40.140.10 8 175 1.5E-64 T 13-10-2018 VAA_01185 f064f40dbabe3e26bc629561a820c183 178 SUPERFAMILY SSF53927 8 162 6.69E-56 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_01920 0d1c83e6b240c08650a9ee79eb821658 606 Gene3D G3DSA:3.90.1580.10 384 605 7.1E-55 T 13-10-2018 VAA_01920 0d1c83e6b240c08650a9ee79eb821658 606 Pfam PF03781 Sulfatase-modifying factor enzyme 1 391 604 2.1E-49 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VAA_01920 0d1c83e6b240c08650a9ee79eb821658 606 SUPERFAMILY SSF56436 384 605 6.83E-55 T 13-10-2018 IPR016187 C-type lectin fold VAA_01920 0d1c83e6b240c08650a9ee79eb821658 606 Pfam PF08308 PEGA domain 297 362 1.4E-19 T 13-10-2018 IPR013229 PEGA VAA_01757 c6faebc979ad2bf9c5c9b073dfae1794 88 Gene3D G3DSA:3.30.160.140 1 88 6.5E-33 T 13-10-2018 IPR036692 Shew3726-like superfamily VAA_01757 c6faebc979ad2bf9c5c9b073dfae1794 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 5.5E-24 T 13-10-2018 IPR009962 Protein of unknown function DUF1488 VAA_01757 c6faebc979ad2bf9c5c9b073dfae1794 88 SUPERFAMILY SSF160272 1 86 5.36E-28 T 13-10-2018 IPR036692 Shew3726-like superfamily VAA_02244 5d1b7715231cbfc12f869c197478f46e 189 SUPERFAMILY SSF89550 63 175 4.12E-25 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VAA_02244 5d1b7715231cbfc12f869c197478f46e 189 Gene3D G3DSA:3.20.20.140 20 187 1.1E-22 T 13-10-2018 VAA_02514 98c7020178be29a06649d7f2522f46db 723 Pfam PF13807 G-rich domain on putative tyrosine kinase 371 451 8.9E-33 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain VAA_02514 98c7020178be29a06649d7f2522f46db 723 SUPERFAMILY SSF52540 529 706 3.75E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02514 98c7020178be29a06649d7f2522f46db 723 Pfam PF13614 AAA domain 539 653 1.8E-12 T 13-10-2018 IPR025669 AAA domain VAA_02514 98c7020178be29a06649d7f2522f46db 723 Gene3D G3DSA:3.40.50.300 446 723 5.9E-78 T 13-10-2018 VAA_02514 98c7020178be29a06649d7f2522f46db 723 Pfam PF02706 Chain length determinant protein 15 107 3.4E-20 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VAA_02514 98c7020178be29a06649d7f2522f46db 723 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 511 714 7.6E-52 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 Gene3D G3DSA:3.40.50.300 11 274 3.5E-98 T 13-10-2018 VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 SUPERFAMILY SSF52540 8 643 1.42E-178 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 13-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 616 5.4E-78 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 Gene3D G3DSA:3.40.50.300 282 637 9.4E-133 T 13-10-2018 VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 Gene3D G3DSA:1.10.10.160 115 188 3.5E-98 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 Gene3D G3DSA:1.10.486.10 383 539 9.4E-133 T 13-10-2018 VAA_02412 890ce234ca7432ab4efcaf0be766ed76 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 1.3E-75 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAA_03766 8a08592cab5b2b79504df0f594e14553 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 230 2.6E-7 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VAA_03766 8a08592cab5b2b79504df0f594e14553 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 2.2E-28 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VAA_03766 8a08592cab5b2b79504df0f594e14553 265 Gene3D G3DSA:1.10.287.1080 132 264 4.0E-45 T 13-10-2018 VAA_03766 8a08592cab5b2b79504df0f594e14553 265 Gene3D G3DSA:1.10.287.1080 2 125 5.9E-46 T 13-10-2018 VAA_03766 8a08592cab5b2b79504df0f594e14553 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 7.1E-105 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VAA_03766 8a08592cab5b2b79504df0f594e14553 265 SUPERFAMILY SSF101386 3 105 8.83E-26 T 13-10-2018 VAA_03766 8a08592cab5b2b79504df0f594e14553 265 SUPERFAMILY SSF101386 139 238 1.8E-24 T 13-10-2018 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 SUPERFAMILY SSF55035 146 261 4.45E-35 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 13-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 Gene3D G3DSA:3.90.770.10 92 405 2.2E-105 T 13-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 50 419 3.8E-110 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 Gene3D G3DSA:3.30.70.420 146 261 2.2E-105 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 SUPERFAMILY SSF56542 31 409 1.57E-75 T 13-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 4.6E-37 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 4.6E-37 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 4.6E-37 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 4.6E-37 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 4.6E-37 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01552 6edccd1414e0ad4f60e02ef9c3357bc0 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 4.6E-37 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VAA_01824 df09617b8e5391ee01403d5bf7294c76 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 412 8.8E-135 T 13-10-2018 VAA_01824 df09617b8e5391ee01403d5bf7294c76 443 Gene3D G3DSA:1.20.1250.20 237 438 5.6E-45 T 13-10-2018 VAA_01824 df09617b8e5391ee01403d5bf7294c76 443 Gene3D G3DSA:1.20.1250.20 18 222 5.2E-47 T 13-10-2018 VAA_01824 df09617b8e5391ee01403d5bf7294c76 443 PIRSF PIRSF002808 6 442 2.8E-135 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAA_01824 df09617b8e5391ee01403d5bf7294c76 443 Pfam PF07690 Major Facilitator Superfamily 36 395 4.4E-48 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01824 df09617b8e5391ee01403d5bf7294c76 443 SUPERFAMILY SSF103473 13 433 7.32E-80 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_02560 02b12c04296493122e9925dacf91cb8f 339 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 37 337 38.741 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 Gene3D G3DSA:3.40.50.1370 38 334 1.2E-119 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 69 91 4.4E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 316 330 4.4E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 164 181 4.4E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 294 299 4.4E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 256 265 4.4E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 109 118 4.4E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 38 335 1.8E-116 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 Gene3D G3DSA:3.40.50.1370 165 322 1.2E-119 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 79 86 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 185 333 8.2E-33 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 300 323 2.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 165 176 2.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 79 98 2.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 290 299 2.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 SUPERFAMILY SSF53671 34 336 2.49E-101 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02560 02b12c04296493122e9925dacf91cb8f 339 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 38 178 1.9E-44 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VAA_00942 1a9a2b842dd373209099b5c25af43808 472 Pfam PF07730 Histidine kinase 304 368 1.3E-11 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VAA_00942 1a9a2b842dd373209099b5c25af43808 472 SUPERFAMILY SSF55874 382 460 1.07E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00942 1a9a2b842dd373209099b5c25af43808 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 461 1.9E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00942 1a9a2b842dd373209099b5c25af43808 472 Pfam PF05231 MASE1 13 276 3.4E-13 T 13-10-2018 IPR007895 MASE1 VAA_00942 1a9a2b842dd373209099b5c25af43808 472 Gene3D G3DSA:3.30.565.10 372 469 1.1E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03262 73f4c7f66c80fcf7c381a126ff69b7f2 461 Pfam PF00501 AMP-binding enzyme 25 308 2.5E-16 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_03262 73f4c7f66c80fcf7c381a126ff69b7f2 461 SUPERFAMILY SSF56801 28 456 1.16E-51 T 13-10-2018 VAA_03262 73f4c7f66c80fcf7c381a126ff69b7f2 461 Gene3D G3DSA:3.40.50.12780 17 353 2.0E-22 T 13-10-2018 VAA_03262 73f4c7f66c80fcf7c381a126ff69b7f2 461 Gene3D G3DSA:3.30.300.30 354 456 6.4E-14 T 13-10-2018 VAA_01313 d488cb12cd0c3d88d013fe64536a1fb5 381 Gene3D G3DSA:3.20.20.190 49 378 4.9E-119 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAA_01313 d488cb12cd0c3d88d013fe64536a1fb5 381 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 56 372 8.7E-62 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VAA_01313 d488cb12cd0c3d88d013fe64536a1fb5 381 SUPERFAMILY SSF51695 51 377 5.76E-90 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAA_01718 b7ea8fcf1a758ffe7577181a52a39932 162 Pfam PF04093 rod shape-determining protein MreD 9 154 1.5E-39 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VAA_01718 b7ea8fcf1a758ffe7577181a52a39932 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 4.1E-36 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VAA_01718 b7ea8fcf1a758ffe7577181a52a39932 162 PIRSF PIRSF018472 1 162 8.9E-41 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VAA_01191 9d56b6c10756b9622d1442150869d48e 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01191 9d56b6c10756b9622d1442150869d48e 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01191 9d56b6c10756b9622d1442150869d48e 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.8E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_02431 dff903309f270e1cbb4708cddb342858 962 Pfam PF00704 Glycosyl hydrolases family 18 629 939 1.5E-14 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAA_02431 dff903309f270e1cbb4708cddb342858 962 Gene3D G3DSA:2.60.40.10 267 362 2.2E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02431 dff903309f270e1cbb4708cddb342858 962 Gene3D G3DSA:2.60.40.10 430 524 4.1E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02431 dff903309f270e1cbb4708cddb342858 962 Gene3D G3DSA:2.60.40.10 170 263 1.5E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02431 dff903309f270e1cbb4708cddb342858 962 SUPERFAMILY SSF51445 626 945 1.79E-31 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_02431 dff903309f270e1cbb4708cddb342858 962 Gene3D G3DSA:2.60.40.10 526 616 4.5E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02431 dff903309f270e1cbb4708cddb342858 962 SMART SM00636 626 941 0.0076 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VAA_01800 52e8f4038422dff7a59e682e1b1c02e9 446 Pfam PF01618 MotA/TolQ/ExbB proton channel family 304 423 2.9E-31 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAA_01800 52e8f4038422dff7a59e682e1b1c02e9 446 PIRSF PIRSF037714 1 446 4.9E-150 T 13-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.098 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 Gene3D G3DSA:1.10.520.20 2 106 4.3E-39 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 4.8E-64 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 SUPERFAMILY SSF47928 3 105 9.02E-29 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.8E-53 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.2E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.2E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.2E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.2E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00828 44bf653e4fd821e334f7737cf34b8c88 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.2E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_01296 a399e4c1ff29a60528b718af24a2a891 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 359 1.2E-32 T 13-10-2018 IPR000160 GGDEF domain VAA_01296 a399e4c1ff29a60528b718af24a2a891 366 Gene3D G3DSA:3.30.70.270 207 365 3.2E-40 T 13-10-2018 VAA_01296 a399e4c1ff29a60528b718af24a2a891 366 SUPERFAMILY SSF55073 216 360 2.35E-35 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01296 a399e4c1ff29a60528b718af24a2a891 366 SMART SM00267 201 365 1.1E-33 T 13-10-2018 IPR000160 GGDEF domain VAA_01296 a399e4c1ff29a60528b718af24a2a891 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 358 2.0E-33 T 13-10-2018 IPR000160 GGDEF domain VAA_02457 764d303ed2c72fdfd167716a073ea109 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.441 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02457 764d303ed2c72fdfd167716a073ea109 55 SUPERFAMILY SSF57829 1 53 1.04E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VAA_02457 764d303ed2c72fdfd167716a073ea109 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02457 764d303ed2c72fdfd167716a073ea109 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 5.3E-25 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02457 764d303ed2c72fdfd167716a073ea109 55 Gene3D G3DSA:2.20.28.120 1 55 6.5E-29 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02457 764d303ed2c72fdfd167716a073ea109 55 Pfam PF00471 Ribosomal protein L33 7 53 4.0E-16 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 227 238 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 SUPERFAMILY SSF50494 13 284 8.27E-53 T 13-10-2018 IPR009003 Peptidase S1, PA clan VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 309 329 3.5E-4 T 13-10-2018 IPR020008 GlyGly-CTERM domain VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 SMART SM00020 31 280 2.4E-33 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 Gene3D G3DSA:2.40.10.10 25 284 8.1E-49 T 13-10-2018 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 Pfam PF00089 Trypsin 32 280 1.4E-36 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 128 142 8.3E-14 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 67 82 8.3E-14 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 226 238 8.3E-14 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VAA_01002 04477eaf2ebfc2009a7b73eaf315591f 329 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 SUPERFAMILY SSF52540 175 500 1.93E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 SMART SM00382 214 359 6.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 SMART SM00382 603 750 1.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 351 9.2E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 773 847 8.1E-12 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 SUPERFAMILY SSF52540 552 843 1.99E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Gene3D G3DSA:3.40.50.300 167 358 2.8E-61 T 13-10-2018 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Gene3D G3DSA:3.40.50.300 556 771 2.9E-64 T 13-10-2018 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Gene3D G3DSA:3.40.50.300 360 550 1.5E-41 T 13-10-2018 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 310 322 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 SMART SM01086 773 865 2.6E-9 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 857 0.0 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Pfam PF07724 AAA domain (Cdc48 subfamily) 602 767 7.2E-39 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 SUPERFAMILY SSF81923 14 121 4.71E-10 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 8.4E-29 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 8.4E-29 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 8.4E-29 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 714 728 8.4E-29 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Gene3D G3DSA:1.10.1780.10 1 157 1.7E-26 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VAA_03031 bc3d56aab37dfef9b7343afff6f2594d 868 Gene3D G3DSA:1.10.8.60 773 868 2.0E-13 T 13-10-2018 VAA_02991 80dc3e37af235749d3792b29df055e87 416 Gene3D G3DSA:3.40.50.1110 131 408 2.1E-42 T 13-10-2018 IPR036514 SGNH hydrolase superfamily VAA_02991 80dc3e37af235749d3792b29df055e87 416 SUPERFAMILY SSF52266 145 406 5.86E-23 T 13-10-2018 VAA_02991 80dc3e37af235749d3792b29df055e87 416 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 405 2.0E-13 T 13-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VAA_00676 5264d1c5ff7bfb51a60342594bf9316a 111 SUPERFAMILY SSF47413 17 80 5.63E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00676 5264d1c5ff7bfb51a60342594bf9316a 111 SMART SM00530 27 82 5.9E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00676 5264d1c5ff7bfb51a60342594bf9316a 111 Gene3D G3DSA:1.10.260.40 14 85 1.2E-13 T 13-10-2018 VAA_00676 5264d1c5ff7bfb51a60342594bf9316a 111 Pfam PF01381 Helix-turn-helix 28 81 3.4E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01166 32ad300c5469f2353b86b39183307a09 627 SUPERFAMILY SSF52518 8 381 3.57E-76 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01166 32ad300c5469f2353b86b39183307a09 627 SMART SM00861 319 483 7.1E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_01166 32ad300c5469f2353b86b39183307a09 627 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01166 32ad300c5469f2353b86b39183307a09 627 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 8.3E-38 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_01166 32ad300c5469f2353b86b39183307a09 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 625 1.1E-300 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01166 32ad300c5469f2353b86b39183307a09 627 Gene3D G3DSA:3.40.50.970 317 490 5.5E-65 T 13-10-2018 VAA_01166 32ad300c5469f2353b86b39183307a09 627 Pfam PF02780 Transketolase, C-terminal domain 509 617 1.1E-25 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VAA_01166 32ad300c5469f2353b86b39183307a09 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.1E-118 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01166 32ad300c5469f2353b86b39183307a09 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 626 45.836 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01166 32ad300c5469f2353b86b39183307a09 627 SUPERFAMILY SSF52518 317 502 2.62E-56 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01166 32ad300c5469f2353b86b39183307a09 627 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01166 32ad300c5469f2353b86b39183307a09 627 Gene3D G3DSA:3.40.50.920 495 627 2.1E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_01166 32ad300c5469f2353b86b39183307a09 627 SUPERFAMILY SSF52922 492 625 7.98E-29 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 SUPERFAMILY SSF52540 136 371 3.15E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Gene3D G3DSA:1.10.8.60 303 380 1.2E-29 T 13-10-2018 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 SMART SM00448 5 116 6.5E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Pfam PF02954 Bacterial regulatory protein, Fis family 421 460 3.7E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 SUPERFAMILY SSF46689 343 461 5.38E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Gene3D G3DSA:1.10.10.60 401 467 4.5E-9 T 13-10-2018 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Pfam PF00072 Response regulator receiver domain 7 116 2.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 SMART SM00382 150 297 6.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 SUPERFAMILY SSF52172 4 174 2.99E-40 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Gene3D G3DSA:3.40.50.300 121 301 2.0E-65 T 13-10-2018 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Pfam PF00158 Sigma-54 interaction domain 135 296 1.6E-65 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_03460 dd901a0d74853e5d2477ca3e8edc7e62 470 Gene3D G3DSA:3.40.50.2300 2 120 1.1E-33 T 13-10-2018 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 Gene3D G3DSA:2.30.170.50 1 71 3.1E-33 T 13-10-2018 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 PRINTS PR01249 Ribosomal protein L31 signature 32 47 3.5E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 PRINTS PR01249 Ribosomal protein L31 signature 47 65 3.5E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 SUPERFAMILY SSF143800 1 68 1.45E-27 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 Pfam PF01197 Ribosomal protein L31 1 66 5.7E-32 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.787 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02585 87c27c3a95d7835943115a92a0a66f46 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.7E-35 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03726 e81c9e450153241df5a033fea600a118 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 3.7E-30 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VAA_03726 e81c9e450153241df5a033fea600a118 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.293 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VAA_03726 e81c9e450153241df5a033fea600a118 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VAA_03726 e81c9e450153241df5a033fea600a118 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.0E-101 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VAA_03726 e81c9e450153241df5a033fea600a118 288 PIRSF PIRSF005917 1 287 6.3E-107 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VAA_03726 e81c9e450153241df5a033fea600a118 288 Gene3D G3DSA:3.30.950.10 121 241 2.3E-44 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VAA_03726 e81c9e450153241df5a033fea600a118 288 Gene3D G3DSA:3.40.1010.10 2 120 1.4E-47 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VAA_03726 e81c9e450153241df5a033fea600a118 288 SUPERFAMILY SSF53790 12 232 3.01E-85 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VAA_03240 c4fd76137957dae2111b0ca7481ca772 321 SUPERFAMILY SSF53822 43 275 1.44E-18 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_03240 c4fd76137957dae2111b0ca7481ca772 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 6.7E-118 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein VAA_03240 c4fd76137957dae2111b0ca7481ca772 321 Gene3D G3DSA:3.40.50.2300 46 292 1.9E-103 T 13-10-2018 VAA_03240 c4fd76137957dae2111b0ca7481ca772 321 Gene3D G3DSA:3.40.50.2300 143 314 1.9E-103 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 SUPERFAMILY SSF52021 4 142 4.18E-58 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.381 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 Gene3D G3DSA:3.50.30.20 2 151 1.7E-61 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 Gene3D G3DSA:3.40.50.880 152 378 3.0E-74 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 7.5E-46 T 13-10-2018 IPR017926 Glutamine amidotransferase VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 SMART SM01097 3 133 2.7E-93 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.0E-52 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 8.8E-148 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.3E-39 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.3E-39 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.3E-39 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.3E-39 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.3E-39 T 13-10-2018 VAA_03704 cd6a02e079836a33c1c66f14e412d987 379 SUPERFAMILY SSF52317 153 377 9.63E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_00344 52c3b4dc04928d303bf7fa94a135d2c6 383 SUPERFAMILY SSF51261 167 381 3.45E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_00344 52c3b4dc04928d303bf7fa94a135d2c6 383 Gene3D G3DSA:2.70.70.10 244 383 9.3E-35 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_00344 52c3b4dc04928d303bf7fa94a135d2c6 383 Pfam PF01551 Peptidase family M23 284 377 1.4E-24 T 13-10-2018 IPR016047 Peptidase M23 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 Gene3D G3DSA:3.40.190.10 108 197 1.2E-70 T 13-10-2018 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 12 202 8.4E-55 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 Pfam PF08029 HisG, C-terminal domain 228 301 1.7E-23 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 SUPERFAMILY SSF53850 11 228 1.28E-66 T 13-10-2018 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 Pfam PF01634 ATP phosphoribosyltransferase 59 224 2.3E-46 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 206 303 2.0E-30 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 Gene3D G3DSA:3.30.70.120 231 304 1.7E-32 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 11 304 35.224 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 SUPERFAMILY SSF54913 231 303 1.22E-20 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 Gene3D G3DSA:3.40.190.10 12 226 1.2E-70 T 13-10-2018 VAA_02200 cb2b06da5d997d5960ebe5498b9ee735 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 161 182 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VAA_03512 be056a961c33a2c636e6696a319a78ec 397 Gene3D G3DSA:1.20.1330.10 42 232 8.1E-34 T 13-10-2018 VAA_03512 be056a961c33a2c636e6696a319a78ec 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.7E-11 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03512 be056a961c33a2c636e6696a319a78ec 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 320 397 1.6E-5 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03512 be056a961c33a2c636e6696a319a78ec 397 Gene3D G3DSA:1.20.1330.10 269 373 1.0E-9 T 13-10-2018 VAA_03512 be056a961c33a2c636e6696a319a78ec 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 9.7E-97 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VAA_03512 be056a961c33a2c636e6696a319a78ec 397 SUPERFAMILY SSF64518 1 397 1.05E-66 T 13-10-2018 VAA_02470 28673fe2482e792faf95df21c24556c8 260 Gene3D G3DSA:3.90.550.20 79 234 9.7E-16 T 13-10-2018 VAA_02470 28673fe2482e792faf95df21c24556c8 260 SUPERFAMILY SSF53448 14 257 1.33E-29 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02470 28673fe2482e792faf95df21c24556c8 260 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 73 148 5.5E-13 T 13-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif VAA_01301 bdb377088fdff74b0f588a208304a778 306 SUPERFAMILY SSF103481 44 144 3.79E-12 T 13-10-2018 VAA_01301 bdb377088fdff74b0f588a208304a778 306 SUPERFAMILY SSF103481 191 291 1.16E-12 T 13-10-2018 VAA_01301 bdb377088fdff74b0f588a208304a778 306 Pfam PF00892 EamA-like transporter family 14 141 7.1E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_01301 bdb377088fdff74b0f588a208304a778 306 Pfam PF00892 EamA-like transporter family 156 289 9.7E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_03485 aad3d689343b555b45d716471742d80e 155 Gene3D G3DSA:3.40.30.10 3 155 1.6E-44 T 13-10-2018 VAA_03485 aad3d689343b555b45d716471742d80e 155 SUPERFAMILY SSF52833 4 154 3.19E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03485 aad3d689343b555b45d716471742d80e 155 Pfam PF00578 AhpC/TSA family 7 134 6.7E-34 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAA_02891 7d921f9ec11a135895fbaa11c77dd76b 443 SUPERFAMILY SSF56935 51 443 4.35E-84 T 13-10-2018 VAA_02891 7d921f9ec11a135895fbaa11c77dd76b 443 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 129 437 2.0E-107 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VAA_02891 7d921f9ec11a135895fbaa11c77dd76b 443 Pfam PF02264 LamB porin 88 443 5.1E-41 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VAA_02891 7d921f9ec11a135895fbaa11c77dd76b 443 Gene3D G3DSA:2.40.170.10 52 443 1.7E-36 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VAA_02111 b752db7b752f0094ecbfa64819bce684 288 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 5.6E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02111 b752db7b752f0094ecbfa64819bce684 288 Gene3D G3DSA:1.10.10.10 4 107 3.0E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02111 b752db7b752f0094ecbfa64819bce684 288 SUPERFAMILY SSF46894 6 109 8.22E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02111 b752db7b752f0094ecbfa64819bce684 288 SMART SM00862 30 107 4.4E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 SUPERFAMILY SSF52540 8 224 1.25E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 Pfam PF00005 ABC transporter 23 172 9.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 Pfam PF00005 ABC transporter 275 427 2.5E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 SUPERFAMILY SSF52540 274 489 1.97E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 Gene3D G3DSA:3.40.50.300 1 242 7.4E-57 T 13-10-2018 VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 SMART SM00382 32 220 1.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 SMART SM00382 281 476 1.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00560 eaaeaf382a6062ac61298992aad8d2be 503 Gene3D G3DSA:3.40.50.300 269 497 1.0E-42 T 13-10-2018 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 SUPERFAMILY SSF51419 27 284 1.57E-79 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 242 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 SUPERFAMILY SSF50621 259 414 1.9E-52 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.8E-72 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.4E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.4E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.4E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.4E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.4E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.905 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 Gene3D G3DSA:2.40.37.10 18 404 5.4E-150 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 Gene3D G3DSA:3.20.20.10 35 277 5.4E-150 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 4.5E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 4.5E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 4.5E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 4.5E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 1.8E-167 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_01955 a174a5ac38d07fbe8199bc02d21e0d86 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 9.0E-26 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 SMART SM00448 5 119 3.1E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 Gene3D G3DSA:3.40.50.2300 3 132 2.2E-25 T 13-10-2018 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 Gene3D G3DSA:1.10.10.10 148 209 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 Pfam PF00072 Response regulator receiver domain 7 119 4.6E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 SMART SM00421 147 204 7.3E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 SUPERFAMILY SSF52172 4 178 8.02E-25 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02555 a15d013e9c01fc18df924a0c4805d101 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.9E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01667 4cb377c0328e37945ccb1df36d800e4d 92 PIRSF PIRSF029827 3 92 3.6E-44 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAA_01667 4cb377c0328e37945ccb1df36d800e4d 92 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 3 78 4.0E-39 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAA_01667 4cb377c0328e37945ccb1df36d800e4d 92 Pfam PF04362 Bacterial Fe(2+) trafficking 3 90 4.1E-43 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAA_01667 4cb377c0328e37945ccb1df36d800e4d 92 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 3 90 28.614 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VAA_01667 4cb377c0328e37945ccb1df36d800e4d 92 Gene3D G3DSA:1.10.3880.10 1 92 5.1E-40 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VAA_01667 4cb377c0328e37945ccb1df36d800e4d 92 SUPERFAMILY SSF111148 3 91 4.71E-41 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 PIRSF PIRSF005900 1 156 4.1E-46 T 13-10-2018 IPR002177 DNA-binding protein Dps VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 4.2E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 4.2E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 4.2E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 Gene3D G3DSA:1.20.1260.10 1 156 8.0E-56 T 13-10-2018 IPR012347 Ferritin-like VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 Pfam PF00210 Ferritin-like domain 18 156 2.1E-26 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 SUPERFAMILY SSF47240 2 156 3.14E-44 T 13-10-2018 IPR009078 Ferritin-like superfamily VAA_01966 05d620ba7d3362832b6ef061bfdca3fd 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VAA_01769 2037a8208e3006e17df6391feee160de 194 Hamap MF_00163 Peptide deformylase [def]. 27 187 31.02 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 SUPERFAMILY SSF56420 28 190 1.96E-62 T 13-10-2018 IPR036821 Peptide deformylase superfamily VAA_01769 2037a8208e3006e17df6391feee160de 194 Gene3D G3DSA:3.90.45.10 26 194 1.2E-66 T 13-10-2018 IPR036821 Peptide deformylase superfamily VAA_01769 2037a8208e3006e17df6391feee160de 194 PRINTS PR01576 Peptide deformylase signature 126 144 2.8E-37 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 PRINTS PR01576 Peptide deformylase signature 58 87 2.8E-37 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 PRINTS PR01576 Peptide deformylase signature 114 125 2.8E-37 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 PRINTS PR01576 Peptide deformylase signature 145 174 2.8E-37 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 PIRSF PIRSF004749 11 194 2.2E-56 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 Pfam PF01327 Polypeptide deformylase 29 177 2.6E-50 T 13-10-2018 IPR023635 Peptide deformylase VAA_01769 2037a8208e3006e17df6391feee160de 194 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 29 185 4.2E-61 T 13-10-2018 IPR023635 Peptide deformylase VAA_00606 5783dac96f9d374731f948b0abc65f89 460 Gene3D G3DSA:3.40.50.300 183 384 6.3E-23 T 13-10-2018 VAA_00606 5783dac96f9d374731f948b0abc65f89 460 SMART SM00487 1 182 9.6E-6 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00606 5783dac96f9d374731f948b0abc65f89 460 Pfam PF04851 Type III restriction enzyme, res subunit 5 157 8.4E-9 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_00606 5783dac96f9d374731f948b0abc65f89 460 Pfam PF00271 Helicase conserved C-terminal domain 258 356 1.5E-4 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00606 5783dac96f9d374731f948b0abc65f89 460 Gene3D G3DSA:3.40.50.300 2 175 1.6E-15 T 13-10-2018 VAA_00606 5783dac96f9d374731f948b0abc65f89 460 SUPERFAMILY SSF52540 24 359 1.9E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 Gene3D G3DSA:3.40.30.10 41 143 3.7E-33 T 13-10-2018 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 Gene3D G3DSA:2.20.28.140 1 37 6.4E-17 T 13-10-2018 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 PIRSF PIRSF000077 38 142 7.0E-32 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 1.9E-34 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 Pfam PF00085 Thioredoxin 43 140 8.3E-29 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 SUPERFAMILY SSF52833 28 141 1.32E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 PRINTS PR00421 Thioredoxin family signature 58 66 1.6E-7 T 13-10-2018 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 PRINTS PR00421 Thioredoxin family signature 106 117 1.6E-7 T 13-10-2018 VAA_01533 09d32c6303823d02e52c5f7ddcf01561 144 PRINTS PR00421 Thioredoxin family signature 66 75 1.6E-7 T 13-10-2018 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 Hamap MF_00020 Acetate kinase [ackA]. 1 411 160.075 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 Gene3D G3DSA:3.30.420.40 211 411 2.3E-72 T 13-10-2018 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 Pfam PF00871 Acetokinase family 20 405 1.2E-139 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 TIGRFAM TIGR00016 ackA: acetate kinase 16 410 1.5E-144 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 217 234 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 20 31 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PIRSF PIRSF000722 16 411 1.4E-133 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 SUPERFAMILY SSF53067 19 210 5.61E-60 T 13-10-2018 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PRINTS PR00471 Acetate kinase family signature 20 31 2.5E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PRINTS PR00471 Acetate kinase family signature 217 238 2.5E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PRINTS PR00471 Acetate kinase family signature 335 351 2.5E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PRINTS PR00471 Acetate kinase family signature 313 326 2.5E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PRINTS PR00471 Acetate kinase family signature 187 200 2.5E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 PRINTS PR00471 Acetate kinase family signature 392 404 2.5E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 Gene3D G3DSA:3.30.420.40 17 209 1.1E-62 T 13-10-2018 VAA_03004 51132fb4691102bff90b4e06c355c05f 411 SUPERFAMILY SSF53067 172 410 3.97E-79 T 13-10-2018 VAA_03552 215d0f1a095889ca9ebd20708dca9af5 254 SUPERFAMILY SSF53335 71 212 5.1E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03552 215d0f1a095889ca9ebd20708dca9af5 254 Gene3D G3DSA:3.40.50.150 50 197 3.8E-14 T 13-10-2018 VAA_03552 215d0f1a095889ca9ebd20708dca9af5 254 Pfam PF08241 Methyltransferase domain 63 125 9.9E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VAA_00958 31943641ac0774b11437256bdbf852f2 347 SUPERFAMILY SSF51412 6 336 2.62E-99 T 13-10-2018 VAA_00958 31943641ac0774b11437256bdbf852f2 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.564 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VAA_00958 31943641ac0774b11437256bdbf852f2 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.0E-183 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VAA_00958 31943641ac0774b11437256bdbf852f2 347 SMART SM01240 7 344 7.5E-138 T 13-10-2018 VAA_00958 31943641ac0774b11437256bdbf852f2 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 4.1E-79 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VAA_00958 31943641ac0774b11437256bdbf852f2 347 PIRSF PIRSF000235 1 347 8.0E-194 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VAA_00958 31943641ac0774b11437256bdbf852f2 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VAA_00958 31943641ac0774b11437256bdbf852f2 347 Gene3D G3DSA:3.20.20.70 1 345 6.2E-116 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 Pfam PF07196 Flagellin hook IN motif 219 271 3.4E-10 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 SUPERFAMILY SSF64518 24 399 1.57E-93 T 13-10-2018 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 Gene3D G3DSA:1.20.1330.10 67 350 6.8E-76 T 13-10-2018 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 Gene3D G3DSA:1.10.8.410 351 399 1.1E-19 T 13-10-2018 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 Pfam PF00669 Bacterial flagellin N-terminal helical region 28 164 6.4E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 Gene3D G3DSA:3.30.70.2120 197 298 6.8E-76 T 13-10-2018 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 PRINTS PR00207 Flagellin signature 60 77 5.9E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 PRINTS PR00207 Flagellin signature 134 157 5.9E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 PRINTS PR00207 Flagellin signature 99 118 5.9E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03510 05953805667d67c152a0390bd3c4d4eb 400 Pfam PF00700 Bacterial flagellin C-terminal helical region 315 399 2.4E-24 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_02453 33006e07faf55adf09c61abbeedf09ac 196 SUPERFAMILY SSF46689 6 78 2.74E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02453 33006e07faf55adf09c61abbeedf09ac 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.092 T 13-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VAA_02453 33006e07faf55adf09c61abbeedf09ac 196 Gene3D G3DSA:1.10.357.10 3 196 1.1E-78 T 13-10-2018 VAA_02453 33006e07faf55adf09c61abbeedf09ac 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 4.5E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02453 33006e07faf55adf09c61abbeedf09ac 196 SUPERFAMILY SSF48498 81 191 3.56E-10 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 24 379 3.2E-159 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 Pfam PF00266 Aminotransferase class-V 24 368 5.7E-66 T 13-10-2018 IPR000192 Aminotransferase class V domain VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 22 379 51.265 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 Gene3D G3DSA:3.40.640.10 37 277 4.9E-90 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 SUPERFAMILY SSF53383 24 377 3.75E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 PIRSF PIRSF000525 18 380 3.5E-152 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VAA_02209 781ac2f4c79a7155141ab63ad04beeda 380 Gene3D G3DSA:3.90.1150.10 278 380 6.3E-40 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 Hamap MF_01201 Alanine racemase. 40 406 25.577 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 TIGRFAM TIGR00492 alr: alanine racemase 43 406 2.7E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 Pfam PF01168 Alanine racemase, N-terminal domain 47 270 9.8E-50 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 102 120 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 164 176 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 332 349 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 200 211 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 311 326 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 66 82 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 PRINTS PR00992 Alanine racemase signature 243 270 6.1E-32 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 SUPERFAMILY SSF51419 47 281 1.83E-46 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 Gene3D G3DSA:2.40.37.10 43 402 1.2E-128 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 Pfam PF00842 Alanine racemase, C-terminal domain 279 405 4.0E-31 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 SMART SM01005 278 406 7.7E-45 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 Gene3D G3DSA:3.20.20.10 49 266 1.2E-128 T 13-10-2018 IPR029066 PLP-binding barrel VAA_01439 80b5cd939de593bbd83d7dc4642ea86e 407 SUPERFAMILY SSF50621 271 406 1.53E-38 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_01418 fa14366e1a50a21d6d0c3f8e1c122702 172 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 6 166 19.677 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VAA_01418 fa14366e1a50a21d6d0c3f8e1c122702 172 SUPERFAMILY SSF64438 13 164 1.28E-32 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VAA_01418 fa14366e1a50a21d6d0c3f8e1c122702 172 Gene3D G3DSA:3.30.1330.200 10 171 6.3E-40 T 13-10-2018 IPR038592 CheD-like superfamily VAA_01418 fa14366e1a50a21d6d0c3f8e1c122702 172 Pfam PF03975 CheD chemotactic sensory transduction 55 161 6.3E-20 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VAA_00755 5c244811ef1d92298fc69031799c821c 207 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 206 1.7E-37 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VAA_00755 5c244811ef1d92298fc69031799c821c 207 SUPERFAMILY SSF52374 3 206 2.52E-67 T 13-10-2018 VAA_00755 5c244811ef1d92298fc69031799c821c 207 Gene3D G3DSA:3.40.50.620 4 77 3.7E-84 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00755 5c244811ef1d92298fc69031799c821c 207 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.7E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_00755 5c244811ef1d92298fc69031799c821c 207 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 1.7E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_00755 5c244811ef1d92298fc69031799c821c 207 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.7E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_00755 5c244811ef1d92298fc69031799c821c 207 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.7E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_00755 5c244811ef1d92298fc69031799c821c 207 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 1.7E-14 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_00755 5c244811ef1d92298fc69031799c821c 207 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 206 1.2E-91 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VAA_00755 5c244811ef1d92298fc69031799c821c 207 Gene3D G3DSA:3.40.50.620 78 206 3.7E-84 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00263 eec692753d0b71f72b51c9b69c591171 360 SMART SM01005 236 360 2.1E-68 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 Gene3D G3DSA:3.20.20.10 13 220 3.9E-134 T 13-10-2018 IPR029066 PLP-binding barrel VAA_00263 eec692753d0b71f72b51c9b69c591171 360 Hamap MF_01201 Alanine racemase. 4 360 35.644 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 SUPERFAMILY SSF51419 11 237 1.57E-71 T 13-10-2018 IPR029066 PLP-binding barrel VAA_00263 eec692753d0b71f72b51c9b69c591171 360 SUPERFAMILY SSF50621 231 359 4.19E-47 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 TIGRFAM TIGR00492 alr: alanine racemase 6 359 1.4E-131 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 3.6E-73 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 Gene3D G3DSA:2.40.37.10 11 355 3.9E-134 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 4.6E-43 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 158 169 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 63 81 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 290 307 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 195 222 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 342 355 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 269 284 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 123 135 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 29 45 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 PRINTS PR00992 Alanine racemase signature 252 267 3.1E-69 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00263 eec692753d0b71f72b51c9b69c591171 360 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_00197 579cce6830d611cf2942c558c539075c 330 Pfam PF07751 Abi-like protein 35 255 2.2E-50 T 13-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like VAA_00197 579cce6830d611cf2942c558c539075c 330 PIRSF PIRSF034934 4 329 4.6E-61 T 13-10-2018 IPR017034 Abortive infection system protein AbiD/AbiF VAA_02185 c5a0b32d2e825708f74c72df09347070 72 SUPERFAMILY SSF50249 1 70 6.86E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02185 c5a0b32d2e825708f74c72df09347070 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.394 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VAA_02185 c5a0b32d2e825708f74c72df09347070 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.1E-28 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VAA_02185 c5a0b32d2e825708f74c72df09347070 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.8E-39 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VAA_02185 c5a0b32d2e825708f74c72df09347070 72 SMART SM00316 4 72 5.4E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 VAA_02185 c5a0b32d2e825708f74c72df09347070 72 Gene3D G3DSA:2.40.50.140 1 72 5.6E-37 T 13-10-2018 VAA_01656 f5a870ccff529727cedafa92daba75a6 345 Gene3D G3DSA:3.30.450.90 1 100 5.5E-37 T 13-10-2018 VAA_01656 f5a870ccff529727cedafa92daba75a6 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_01656 f5a870ccff529727cedafa92daba75a6 345 SUPERFAMILY SSF52540 6 336 3.06E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01656 f5a870ccff529727cedafa92daba75a6 345 Pfam PF00437 Type II/IV secretion system protein 12 271 3.1E-46 T 13-10-2018 IPR001482 Type II/IV secretion system protein VAA_01656 f5a870ccff529727cedafa92daba75a6 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 336 1.7E-151 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VAA_01656 f5a870ccff529727cedafa92daba75a6 345 Gene3D G3DSA:3.40.50.300 102 343 1.3E-102 T 13-10-2018 VAA_03451 764972c0c90d5f6a9b9be0e12484d121 681 Gene3D G3DSA:3.30.750.140 536 642 5.4E-33 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VAA_03451 764972c0c90d5f6a9b9be0e12484d121 681 Pfam PF02120 Flagellar hook-length control protein FliK 551 634 3.2E-25 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VAA_02982 68351104741225f6eabdf4c0a308277a 285 Pfam PF12833 Helix-turn-helix domain 203 281 1.4E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02982 68351104741225f6eabdf4c0a308277a 285 SUPERFAMILY SSF51215 35 147 1.57E-15 T 13-10-2018 IPR037923 Transcription regulator HTH-like VAA_02982 68351104741225f6eabdf4c0a308277a 285 SUPERFAMILY SSF46689 233 282 1.93E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02982 68351104741225f6eabdf4c0a308277a 285 SUPERFAMILY SSF46689 182 231 5.38E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02982 68351104741225f6eabdf4c0a308277a 285 Pfam PF02311 AraC-like ligand binding domain 38 146 1.0E-4 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAA_02982 68351104741225f6eabdf4c0a308277a 285 Gene3D G3DSA:1.10.10.60 181 285 2.1E-26 T 13-10-2018 VAA_02982 68351104741225f6eabdf4c0a308277a 285 SMART SM00342 197 280 1.0E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02982 68351104741225f6eabdf4c0a308277a 285 Gene3D G3DSA:2.60.120.280 35 169 7.6E-10 T 13-10-2018 VAA_02943 00d99c925d2f1bc12835979294fb7d34 409 Pfam PF12704 MacB-like periplasmic core domain 13 209 1.2E-13 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VAA_02943 00d99c925d2f1bc12835979294fb7d34 409 Pfam PF02687 FtsX-like permease family 302 399 4.7E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 270 3.0E-100 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 SUPERFAMILY SSF51735 5 273 5.48E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 155 172 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 SUPERFAMILY SSF55347 132 241 7.41E-38 T 13-10-2018 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 Gene3D G3DSA:3.40.50.720 8 269 3.1E-102 T 13-10-2018 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 PIRSF PIRSF000161 5 273 8.8E-88 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 7 270 35.5 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 7 130 1.1E-39 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 Gene3D G3DSA:3.30.360.10 132 239 3.1E-102 T 13-10-2018 VAA_03706 f51ff436fc34cd81eb336f9fe4f2b4ff 274 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 133 269 2.4E-44 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 3.5E-26 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 Pfam PF01545 Cation efflux family 15 206 1.2E-43 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 SUPERFAMILY SSF161111 8 207 7.32E-52 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 SUPERFAMILY SSF160240 210 288 7.98E-25 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 Gene3D G3DSA:1.20.1510.10 8 206 1.3E-61 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 Gene3D G3DSA:3.30.70.1350 207 290 2.7E-31 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VAA_02575 4c1cadd78c1c8cb85da44b0b5e838de8 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 6.5E-72 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAA_00346 9a7e0f49861c716a388b7366af7c6921 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 2.3E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00346 9a7e0f49861c716a388b7366af7c6921 212 Gene3D G3DSA:1.10.357.10 1 209 4.5E-63 T 13-10-2018 VAA_00346 9a7e0f49861c716a388b7366af7c6921 212 SUPERFAMILY SSF46689 3 73 4.51E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00346 9a7e0f49861c716a388b7366af7c6921 212 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.9E-42 T 13-10-2018 IPR025722 Bacterial transcriptional repressor TetR VAA_00346 9a7e0f49861c716a388b7366af7c6921 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00346 9a7e0f49861c716a388b7366af7c6921 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 SUPERFAMILY SSF88713 367 550 2.67E-38 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 Gene3D G3DSA:3.20.20.370 339 579 4.5E-60 T 13-10-2018 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 Pfam PF13439 Glycosyltransferase Family 4 14 159 9.5E-21 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 Pfam PF01522 Polysaccharide deacetylase 406 543 1.1E-31 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 SUPERFAMILY SSF53756 4 338 3.86E-30 T 13-10-2018 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 Gene3D G3DSA:3.40.50.2000 1 162 1.8E-18 T 13-10-2018 VAA_02474 e98ae7ddf0391e5c282f059d83195b50 590 Gene3D G3DSA:3.40.50.2000 163 284 3.6E-5 T 13-10-2018 VAA_03063 226e1d8d16264e4f341d3715d6060d77 382 Pfam PF12698 ABC-2 family transporter protein 19 354 1.4E-42 T 13-10-2018 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 230 1.4E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 230 246 1.4E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 246 258 1.4E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 Pfam PF00196 Bacterial regulatory proteins, luxR family 215 270 1.7E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 SMART SM00421 213 270 2.1E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 SUPERFAMILY SSF55785 72 183 5.76E-9 T 13-10-2018 IPR035965 PAS domain superfamily VAA_01919 0dd77ea28287672789366b9f470a4e15 298 Gene3D G3DSA:1.10.10.10 209 274 5.4E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01919 0dd77ea28287672789366b9f470a4e15 298 Pfam PF08448 PAS fold 73 184 1.7E-21 T 13-10-2018 IPR013656 PAS fold-4 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 SUPERFAMILY SSF46894 209 275 3.27E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01919 0dd77ea28287672789366b9f470a4e15 298 Gene3D G3DSA:3.30.450.20 67 188 3.0E-11 T 13-10-2018 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 SMART SM00958 228 359 3.3E-80 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.949 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Gene3D G3DSA:3.40.50.300 22 416 2.2E-175 T 13-10-2018 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.2E-37 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Pfam PF02810 SEC-C motif 888 906 2.0E-10 T 13-10-2018 IPR004027 SEC-C motif VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 SUPERFAMILY SSF81767 227 369 1.83E-42 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 SUPERFAMILY SSF81886 620 896 4.45E-84 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 101 115 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 117 127 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 170 190 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 340 362 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 377 394 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 63 87 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 PRINTS PR00906 SecA protein signature 414 427 3.1E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 SMART SM00957 6 403 0.0 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Pfam PF07517 SecA DEAD-like domain 7 403 1.4E-132 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Gene3D G3DSA:3.90.1440.10 229 369 2.2E-175 T 13-10-2018 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Gene3D G3DSA:1.10.3060.10 621 833 5.8E-77 T 13-10-2018 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Gene3D G3DSA:3.40.50.300 418 620 8.4E-87 T 13-10-2018 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.8E-67 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 SUPERFAMILY SSF52540 5 416 7.09E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03708 71cc3a9d4f11121159335ccb325ccc98 908 SUPERFAMILY SSF52540 418 610 1.31E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00638 63783a71328174c0c51de328ab6a2f90 215 Pfam PF00561 alpha/beta hydrolase fold 25 172 1.4E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_00638 63783a71328174c0c51de328ab6a2f90 215 SUPERFAMILY SSF53474 14 201 1.3E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00638 63783a71328174c0c51de328ab6a2f90 215 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 21 206 2.3E-81 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VAA_00638 63783a71328174c0c51de328ab6a2f90 215 Gene3D G3DSA:3.40.50.1820 9 208 6.6E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 Pfam PF13377 Periplasmic binding protein-like domain 170 331 2.5E-35 T 13-10-2018 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 Gene3D G3DSA:3.40.50.2300 55 306 2.0E-66 T 13-10-2018 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 SMART SM00354 1 71 1.9E-32 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 SUPERFAMILY SSF47413 1 57 6.83E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 Gene3D G3DSA:1.10.260.40 1 54 8.5E-23 T 13-10-2018 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.8E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 SUPERFAMILY SSF53822 61 333 2.95E-68 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01452 5242aa65eeceb2ce1baf0721d10614e5 334 Gene3D G3DSA:3.40.50.2300 161 290 2.0E-66 T 13-10-2018 VAA_00920 e5547012652a461b8973d75fc9a959da 638 SMART SM00304 307 361 1.4E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00920 e5547012652a461b8973d75fc9a959da 638 SMART SM00283 376 637 9.3E-87 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00920 e5547012652a461b8973d75fc9a959da 638 Gene3D G3DSA:3.30.450.20 168 284 3.7E-16 T 13-10-2018 VAA_00920 e5547012652a461b8973d75fc9a959da 638 SUPERFAMILY SSF58104 329 638 1.24E-79 T 13-10-2018 VAA_00920 e5547012652a461b8973d75fc9a959da 638 Pfam PF00672 HAMP domain 308 357 5.5E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00920 e5547012652a461b8973d75fc9a959da 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 3.6E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00920 e5547012652a461b8973d75fc9a959da 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 3.6E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_00920 e5547012652a461b8973d75fc9a959da 638 Gene3D G3DSA:1.10.287.950 306 638 3.0E-76 T 13-10-2018 VAA_00920 e5547012652a461b8973d75fc9a959da 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 604 1.0E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 PIRSF PIRSF015761 4 160 1.1E-11 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 PIRSF PIRSF015761 202 403 5.2E-19 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 SUPERFAMILY SSF53067 2 143 4.66E-40 T 13-10-2018 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 Gene3D G3DSA:3.30.420.370 142 215 5.4E-87 T 13-10-2018 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 SUPERFAMILY SSF53067 146 238 9.71E-21 T 13-10-2018 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 239 1.6E-68 T 13-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VAA_00645 489e681faa2b2560165fd562f948ae1b 403 Pfam PF12693 GspL periplasmic domain 245 402 3.3E-48 T 13-10-2018 IPR025691 GspL periplasmic domain VAA_00645 489e681faa2b2560165fd562f948ae1b 403 Gene3D G3DSA:3.30.1360.100 317 403 2.5E-27 T 13-10-2018 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 1.8E-99 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VAA_00645 489e681faa2b2560165fd562f948ae1b 403 Gene3D G3DSA:3.30.420.380 3 237 5.4E-87 T 13-10-2018 VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 Gene3D G3DSA:3.40.50.20 1 114 4.1E-39 T 13-10-2018 VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 SUPERFAMILY SSF56059 98 288 5.77E-49 T 13-10-2018 VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 6.6E-87 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 Gene3D G3DSA:3.30.1490.20 115 181 1.7E-26 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.446 T 13-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.0E-67 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VAA_03601 5d69406066a68e37ca689fbc4bd47f2e 301 Gene3D G3DSA:3.30.470.80 182 299 4.9E-42 T 13-10-2018 VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 Pfam PF14743 DNA ligase OB-like domain 221 285 2.6E-27 T 13-10-2018 IPR029319 DNA ligase, OB-like domain VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 Gene3D G3DSA:2.40.50.140 206 287 1.3E-8 T 13-10-2018 VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 SUPERFAMILY SSF50249 181 285 1.77E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 Gene3D G3DSA:3.30.1490.70 39 198 1.7E-52 T 13-10-2018 VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 SUPERFAMILY SSF56091 29 206 2.5E-34 T 13-10-2018 VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 183 206 - T 13-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VAA_1806 64c3694b5c6e1c4ad34ea424dda382f1 288 Gene3D G3DSA:3.30.470.30 59 159 1.7E-52 T 13-10-2018 VAA_02162 43df7c3fe1512461959b62ec4f0b5c65 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 2.3E-109 T 13-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VAA_02162 43df7c3fe1512461959b62ec4f0b5c65 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 3.8E-56 T 13-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VAA_3171 f569bbd354105695aee9e9dbc3e20f9e 162 SUPERFAMILY SSF54427 31 134 3.5E-32 T 13-10-2018 IPR032710 NTF2-like domain superfamily VAA_3171 f569bbd354105695aee9e9dbc3e20f9e 162 Pfam PF02810 SEC-C motif 145 162 4.8E-9 T 13-10-2018 IPR004027 SEC-C motif VAA_3171 f569bbd354105695aee9e9dbc3e20f9e 162 SUPERFAMILY SSF103642 142 162 1.8E-7 T 13-10-2018 VAA_3171 f569bbd354105695aee9e9dbc3e20f9e 162 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 7 133 25.44 T 13-10-2018 IPR023006 Uncharacterised protein family UPF0225 VAA_3171 f569bbd354105695aee9e9dbc3e20f9e 162 Gene3D G3DSA:3.10.450.50 3 162 8.1E-54 T 13-10-2018 VAA_01071 612e88013261015f3a478c216c30070d 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.8E-52 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.53 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 9.0E-23 T 13-10-2018 VAA_01071 612e88013261015f3a478c216c30070d 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 Pfam PF00453 Ribosomal protein L20 3 108 8.6E-49 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 Gene3D G3DSA:1.10.1900.20 56 117 9.2E-29 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 SUPERFAMILY SSF74731 2 116 5.49E-50 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01071 612e88013261015f3a478c216c30070d 117 Gene3D G3DSA:1.10.720.90 2 55 8.3E-25 T 13-10-2018 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 SUPERFAMILY SSF46785 3 112 2.65E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 SUPERFAMILY SSF53850 90 292 2.35E-21 T 13-10-2018 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.1E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 Gene3D G3DSA:3.40.190.290 92 298 2.3E-12 T 13-10-2018 VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 Gene3D G3DSA:1.10.10.10 7 73 3.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03300 99e37ce890c9924a1da54f4fdb090668 299 Pfam PF03466 LysR substrate binding domain 90 295 5.7E-20 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Pfam PF05193 Peptidase M16 inactive domain 686 857 1.9E-21 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Pfam PF05193 Peptidase M16 inactive domain 219 392 1.2E-26 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Gene3D G3DSA:3.30.830.10 47 270 5.9E-67 T 13-10-2018 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 SUPERFAMILY SSF63411 737 942 5.33E-39 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 SUPERFAMILY SSF63411 519 721 1.31E-44 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Gene3D G3DSA:3.30.830.10 273 473 5.4E-32 T 13-10-2018 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 SUPERFAMILY SSF63411 49 258 4.4E-56 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 SUPERFAMILY SSF63411 281 468 3.67E-29 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Gene3D G3DSA:3.30.830.10 742 936 1.9E-34 T 13-10-2018 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Gene3D G3DSA:3.30.830.10 525 728 5.7E-43 T 13-10-2018 VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Pfam PF00675 Insulinase (Peptidase family M16) 62 183 6.6E-19 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VAA_00714 34c1e5a9a016d94b912b38eff37460d3 951 Pfam PF00675 Insulinase (Peptidase family M16) 537 645 3.6E-10 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VAA_01426 ce835431078bf4bc13154b2fceb60c4e 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.2E-98 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VAA_01426 ce835431078bf4bc13154b2fceb60c4e 453 SUPERFAMILY SSF143548 16 157 3.14E-44 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VAA_01426 ce835431078bf4bc13154b2fceb60c4e 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.2E-229 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VAA_01426 ce835431078bf4bc13154b2fceb60c4e 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.1E-54 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VAA_01426 ce835431078bf4bc13154b2fceb60c4e 453 Gene3D G3DSA:3.30.1330.90 10 159 2.4E-49 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VAA_01807 2b27f07da4b216b2f86c74732d5c7815 465 PIRSF PIRSF006603 14 460 3.5E-58 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01807 2b27f07da4b216b2f86c74732d5c7815 465 Pfam PF01554 MatE 26 185 3.2E-33 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01807 2b27f07da4b216b2f86c74732d5c7815 465 Pfam PF01554 MatE 252 413 4.7E-34 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01807 2b27f07da4b216b2f86c74732d5c7815 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 430 3.3E-114 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 Gene3D G3DSA:3.40.50.300 1 240 1.8E-57 T 13-10-2018 VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 SMART SM00382 278 472 2.8E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 SMART SM00382 30 219 2.8E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 SUPERFAMILY SSF52540 5 229 2.72E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 Pfam PF00005 ABC transporter 270 423 3.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 SUPERFAMILY SSF52540 269 480 1.22E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 Gene3D G3DSA:3.40.50.300 266 496 1.1E-45 T 13-10-2018 VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 Pfam PF00005 ABC transporter 21 170 1.8E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_04316 bf3daaca4f3f8ce58a908e57f01dbdc4 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00327 a3d7dfb8ff74b8cbab8fc227ace261f6 319 SUPERFAMILY SSF47823 33 125 1.1E-17 T 13-10-2018 VAA_00327 a3d7dfb8ff74b8cbab8fc227ace261f6 319 SUPERFAMILY SSF56349 129 302 1.47E-28 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00327 a3d7dfb8ff74b8cbab8fc227ace261f6 319 Pfam PF00589 Phage integrase family 145 300 4.6E-13 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_00327 a3d7dfb8ff74b8cbab8fc227ace261f6 319 Gene3D G3DSA:1.10.150.130 26 127 1.0E-13 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00327 a3d7dfb8ff74b8cbab8fc227ace261f6 319 Gene3D G3DSA:1.10.443.10 129 304 1.2E-29 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_01582 e65826ceffd0438984f660cc30fe76d1 121 SMART SM00448 3 115 5.8E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01582 e65826ceffd0438984f660cc30fe76d1 121 SUPERFAMILY SSF52172 3 118 5.27E-26 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01582 e65826ceffd0438984f660cc30fe76d1 121 Pfam PF00072 Response regulator receiver domain 5 115 4.8E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01582 e65826ceffd0438984f660cc30fe76d1 121 Gene3D G3DSA:3.40.50.2300 2 120 1.1E-25 T 13-10-2018 VAA_00700 b1c996ad5b22a3a538e8c1618ab5103d 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 287 3.6E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00700 b1c996ad5b22a3a538e8c1618ab5103d 290 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 22 285 1.2E-120 T 13-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 VAA_00700 b1c996ad5b22a3a538e8c1618ab5103d 290 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 280 7.0E-101 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VAA_00700 b1c996ad5b22a3a538e8c1618ab5103d 290 SUPERFAMILY SSF161098 30 279 1.4E-53 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00700 b1c996ad5b22a3a538e8c1618ab5103d 290 Gene3D G3DSA:1.10.3720.10 28 284 5.9E-66 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Pfam PF05192 MutS domain III 281 568 4.9E-40 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Gene3D G3DSA:1.10.1420.10 398 514 4.2E-104 T 13-10-2018 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Pfam PF05190 MutS family domain IV 439 529 2.0E-29 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 PIRSF PIRSF037677 12 840 4.3E-158 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 SMART SM00534 618 805 6.1E-118 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 SUPERFAMILY SSF48334 279 576 5.75E-92 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Pfam PF01624 MutS domain I 20 131 2.1E-42 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Pfam PF05188 MutS domain II 140 265 9.9E-32 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Gene3D G3DSA:1.10.1420.10 278 569 4.2E-104 T 13-10-2018 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 SUPERFAMILY SSF53150 126 278 1.14E-40 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Pfam PF00488 MutS domain V 621 808 1.6E-86 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Gene3D G3DSA:3.40.1170.10 11 133 9.6E-53 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 858 25.212 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 SUPERFAMILY SSF52540 578 808 1.14E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00697 932a1175c52ca58b24447d0064c790fe 866 SUPERFAMILY SSF55271 15 125 2.88E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Gene3D G3DSA:3.30.420.110 139 273 1.3E-35 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 Gene3D G3DSA:3.40.50.300 579 863 4.7E-100 T 13-10-2018 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 864 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 699 715 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VAA_00697 932a1175c52ca58b24447d0064c790fe 866 SMART SM00533 295 602 1.1E-107 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 414 2.5E-211 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 SMART SM00382 113 266 2.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 SMART SM00994 13 52 1.0E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Gene3D G3DSA:3.40.50.300 59 317 1.3E-108 T 13-10-2018 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 13-10-2018 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.5E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Gene3D G3DSA:3.30.50.30 2 53 2.6E-26 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Gene3D G3DSA:1.10.8.60 318 426 1.6E-41 T 13-10-2018 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 SMART SM01086 319 414 1.2E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 SUPERFAMILY SSF52540 63 404 3.53E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.381 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VAA_02296 2400cdb83c0a3ea8c40d8a1fd09be796 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 6.9E-16 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_00573 52d51041dcb62045efc134de835c97ed 78 Pfam PF02416 mttA/Hcf106 family 4 50 7.7E-13 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VAA_00573 52d51041dcb62045efc134de835c97ed 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 73 25.558 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VAA_00573 52d51041dcb62045efc134de835c97ed 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 1.6E-21 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 529 696 3.6E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 SUPERFAMILY SSF55073 537 700 7.85E-37 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 SUPERFAMILY SSF55781 179 333 9.16E-10 T 13-10-2018 VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 694 2.6E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 Gene3D G3DSA:3.30.70.270 518 699 2.2E-43 T 13-10-2018 VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 Gene3D G3DSA:3.30.450.40 173 345 1.1E-7 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_00928 af758c5e66e46ce0ec1be816b7aa3365 715 SMART SM00267 521 698 8.7E-50 T 13-10-2018 IPR000160 GGDEF domain VAA_03593 e2d2cda459eff93111c0196350003f9f 387 ProSitePatterns PS00902 Glutamate 5-kinase signature. 224 241 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 SUPERFAMILY SSF88697 294 384 1.99E-24 T 13-10-2018 IPR015947 PUA-like superfamily VAA_03593 e2d2cda459eff93111c0196350003f9f 387 TIGRFAM TIGR01027 proB: glutamate 5-kinase 22 383 2.7E-148 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 Gene3D G3DSA:2.30.130.10 283 385 4.6E-32 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 Hamap MF_00456 Glutamate 5-kinase [proB]. 22 276 35.952 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 PIRSF PIRSF000729 17 386 7.7E-137 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 SMART SM00359 294 377 9.9E-17 T 13-10-2018 IPR002478 PUA domain GO:0003723 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 Pfam PF01472 PUA domain 294 365 6.5E-21 T 13-10-2018 IPR002478 PUA domain GO:0003723 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 Pfam PF00696 Amino acid kinase family 23 251 2.2E-43 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 Gene3D G3DSA:3.40.1160.10 13 282 1.1E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03593 e2d2cda459eff93111c0196350003f9f 387 SUPERFAMILY SSF53633 22 273 1.17E-65 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03593 e2d2cda459eff93111c0196350003f9f 387 PRINTS PR00474 Glutamate 5-kinase family signature 165 192 2.5E-54 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 2.5E-54 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 PRINTS PR00474 Glutamate 5-kinase family signature 93 121 2.5E-54 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 PRINTS PR00474 Glutamate 5-kinase family signature 226 246 2.5E-54 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAA_03593 e2d2cda459eff93111c0196350003f9f 387 PRINTS PR00474 Glutamate 5-kinase family signature 133 154 2.5E-54 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VAA_01741 09ef063a0937b7adab607bcc60eb0272 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 6.0E-125 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VAA_01741 09ef063a0937b7adab607bcc60eb0272 289 SUPERFAMILY SSF53448 2 271 5.42E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01741 09ef063a0937b7adab607bcc60eb0272 289 Gene3D G3DSA:3.90.550.10 1 279 3.3E-82 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01741 09ef063a0937b7adab607bcc60eb0272 289 Pfam PF00483 Nucleotidyl transferase 9 265 4.0E-32 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 Pfam PF00106 short chain dehydrogenase 6 196 9.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03295 4c02359a2372324c072f866cab964791 265 Gene3D G3DSA:3.40.50.720 1 264 7.5E-52 T 13-10-2018 VAA_03295 4c02359a2372324c072f866cab964791 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_03295 4c02359a2372324c072f866cab964791 265 SUPERFAMILY SSF51735 1 259 2.26E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03142 9219eeb2c565cde22d52e888a28411af 446 SMART SM00267 259 431 3.6E-49 T 13-10-2018 IPR000160 GGDEF domain VAA_03142 9219eeb2c565cde22d52e888a28411af 446 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 423 4.1E-46 T 13-10-2018 IPR000160 GGDEF domain VAA_03142 9219eeb2c565cde22d52e888a28411af 446 Gene3D G3DSA:3.30.70.270 256 430 1.6E-52 T 13-10-2018 VAA_03142 9219eeb2c565cde22d52e888a28411af 446 SUPERFAMILY SSF55073 275 429 1.88E-45 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03142 9219eeb2c565cde22d52e888a28411af 446 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 427 3.5E-45 T 13-10-2018 IPR000160 GGDEF domain VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 5.1E-252 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.2E-97 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.219 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 Gene3D G3DSA:1.10.560.10 8 521 8.2E-240 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 Gene3D G3DSA:3.30.260.10 136 410 8.2E-240 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 SUPERFAMILY SSF52029 185 376 1.41E-82 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 Gene3D G3DSA:3.50.7.10 192 372 8.2E-240 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 SUPERFAMILY SSF48592 7 521 2.29E-77 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VAA_02601 3c3625111f29f9ee087d6d455d4e22bb 544 SUPERFAMILY SSF54849 137 203 1.24E-24 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VAA_00889 5e3c367b7b83f35f3047138f74ac81f8 560 SUPERFAMILY SSF53383 77 558 6.73E-71 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00889 5e3c367b7b83f35f3047138f74ac81f8 560 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 90 463 3.7E-29 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VAA_00889 5e3c367b7b83f35f3047138f74ac81f8 560 Gene3D G3DSA:3.40.640.10 118 442 1.4E-57 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02729 667510a9b7d76a676aa1eba8aa28e145 381 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 67 380 3.1E-147 T 13-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VAA_02729 667510a9b7d76a676aa1eba8aa28e145 381 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 72 375 6.2E-145 T 13-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VAA_02729 667510a9b7d76a676aa1eba8aa28e145 381 Gene3D G3DSA:3.40.190.10 177 376 2.5E-114 T 13-10-2018 VAA_02729 667510a9b7d76a676aa1eba8aa28e145 381 Pfam PF13343 Bacterial extracellular solute-binding protein 127 345 1.5E-19 T 13-10-2018 VAA_02729 667510a9b7d76a676aa1eba8aa28e145 381 Gene3D G3DSA:3.40.190.10 77 351 2.5E-114 T 13-10-2018 VAA_02729 667510a9b7d76a676aa1eba8aa28e145 381 SUPERFAMILY SSF53850 76 376 7.37E-63 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 SUPERFAMILY SSF52009 293 411 1.31E-25 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VAA_00370 d14190a21ff607e3212ad9412d104706 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Gene3D G3DSA:1.10.274.10 190 314 3.7E-58 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Gene3D G3DSA:3.20.20.60 400 740 4.6E-103 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VAA_00370 d14190a21ff607e3212ad9412d104706 748 SMART SM00065 17 163 3.7E-22 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_00370 d14190a21ff607e3212ad9412d104706 748 SUPERFAMILY SSF55781 2 159 2.62E-33 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Gene3D G3DSA:3.50.30.10 173 399 3.7E-58 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 SUPERFAMILY SSF51621 421 714 8.64E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 4.3E-15 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VAA_00370 d14190a21ff607e3212ad9412d104706 748 SUPERFAMILY SSF47831 198 311 5.23E-27 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 428 706 1.3E-95 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VAA_00370 d14190a21ff607e3212ad9412d104706 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 172 727 1.2E-133 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Pfam PF01590 GAF domain 17 153 1.8E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_00370 d14190a21ff607e3212ad9412d104706 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 4.0E-22 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 4.0E-22 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 4.0E-22 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 4.0E-22 T 13-10-2018 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 3.9E-23 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VAA_00370 d14190a21ff607e3212ad9412d104706 748 Gene3D G3DSA:3.30.450.40 1 162 9.7E-44 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_00503 ba66ebe71964c1503473db991fbfed4a 84 SUPERFAMILY SSF161187 13 80 3.92E-24 T 13-10-2018 VAA_00503 ba66ebe71964c1503473db991fbfed4a 84 Pfam PF07191 zinc-ribbons 15 78 3.8E-25 T 13-10-2018 IPR010807 Protein of unknown function DUF1407 VAA_00503 ba66ebe71964c1503473db991fbfed4a 84 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 16 78 6.0E-22 T 13-10-2018 IPR010807 Protein of unknown function DUF1407 VAA_00503 ba66ebe71964c1503473db991fbfed4a 84 Gene3D G3DSA:2.10.290.10 12 81 1.0E-23 T 13-10-2018 IPR029037 YfgJ-like VAA_00929 d48f6583ab9d0b5220034814139dd9f0 160 SUPERFAMILY SSF141523 24 158 9.81E-24 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAA_00929 d48f6583ab9d0b5220034814139dd9f0 160 Pfam PF03734 L,D-transpeptidase catalytic domain 24 158 4.9E-19 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VAA_00929 d48f6583ab9d0b5220034814139dd9f0 160 Gene3D G3DSA:2.40.440.10 14 160 1.6E-17 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.8E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 SUPERFAMILY SSF100934 534 607 1.88E-5 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 Gene3D G3DSA:3.30.420.40 179 365 3.5E-165 T 13-10-2018 VAA_01197 ea668bfdd40c523d7940658525120514 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 630 35.851 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VAA_01197 ea668bfdd40c523d7940658525120514 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 Gene3D G3DSA:2.60.34.10 382 522 1.2E-62 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 Pfam PF00012 Hsp70 protein 4 601 5.7E-259 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 SUPERFAMILY SSF53067 1 182 9.83E-65 T 13-10-2018 VAA_01197 ea668bfdd40c523d7940658525120514 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 SUPERFAMILY SSF53067 186 381 1.94E-66 T 13-10-2018 VAA_01197 ea668bfdd40c523d7940658525120514 635 SUPERFAMILY SSF100920 383 539 2.75E-58 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 Gene3D G3DSA:3.90.640.10 228 315 3.5E-165 T 13-10-2018 VAA_01197 ea668bfdd40c523d7940658525120514 635 Gene3D G3DSA:1.20.1270.10 523 602 9.9E-27 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VAA_01197 ea668bfdd40c523d7940658525120514 635 Gene3D G3DSA:3.30.420.40 5 378 3.5E-165 T 13-10-2018 VAA_01197 ea668bfdd40c523d7940658525120514 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 5.3E-282 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VAA_02343 bdcc8504cb1da0e58710da09fdda4e08 134 SUPERFAMILY SSF51316 10 133 5.75E-55 T 13-10-2018 IPR011057 Mss4-like superfamily VAA_02343 bdcc8504cb1da0e58710da09fdda4e08 134 Gene3D G3DSA:2.170.150.20 2 134 7.2E-57 T 13-10-2018 VAA_02343 bdcc8504cb1da0e58710da09fdda4e08 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 131 9.9E-53 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAA_02343 bdcc8504cb1da0e58710da09fdda4e08 134 Pfam PF01641 SelR domain 15 132 8.7E-51 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAA_02343 bdcc8504cb1da0e58710da09fdda4e08 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 36.373 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 Pfam PF01261 Xylose isomerase-like TIM barrel 37 256 5.1E-41 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 SUPERFAMILY SSF51658 18 295 1.7E-100 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 20 293 1.4E-105 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 86 94 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 192 199 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 232 248 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 Hamap MF_00152 Probable endonuclease 4 [nfo]. 19 296 41.762 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 SMART SM00518 20 296 4.1E-119 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VAA_03680 39cf25dac28f15bfb679761742fbcf07 305 Gene3D G3DSA:3.20.20.150 18 301 1.1E-108 T 13-10-2018 VAA_02660 859b884e4ec51d0d5ec6b57dcdfd65aa 198 Gene3D G3DSA:3.10.50.40 3 154 4.6E-60 T 13-10-2018 VAA_02660 859b884e4ec51d0d5ec6b57dcdfd65aa 198 SUPERFAMILY SSF54534 2 140 1.41E-35 T 13-10-2018 VAA_02660 859b884e4ec51d0d5ec6b57dcdfd65aa 198 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.3E-12 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAA_02660 859b884e4ec51d0d5ec6b57dcdfd65aa 198 Gene3D G3DSA:2.40.10.330 71 121 4.6E-60 T 13-10-2018 VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 Gene3D G3DSA:3.40.190.10 114 212 1.2E-73 T 13-10-2018 VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 253 2.2E-85 T 13-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 SMART SM00062 28 256 1.4E-65 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 SMART SM00079 28 255 1.7E-4 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 254 6.7E-61 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 SUPERFAMILY SSF53850 3 257 1.09E-70 T 13-10-2018 VAA_03181 c5bd46498dfaad2c2df8c32cb7b1d031 260 Gene3D G3DSA:3.40.190.10 32 253 1.2E-73 T 13-10-2018 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 Pfam PF00175 Oxidoreductase NAD-binding domain 110 213 6.8E-20 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 Gene3D G3DSA:3.40.50.80 102 235 1.9E-26 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 SUPERFAMILY SSF52343 102 233 2.62E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 Pfam PF00970 Oxidoreductase FAD-binding domain 5 97 1.8E-5 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.3E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 143 1.3E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 PRINTS PR00410 Phenol hydroxylase reductase family signature 94 103 1.3E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 PRINTS PR00410 Phenol hydroxylase reductase family signature 109 128 1.3E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.3E-13 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 SUPERFAMILY SSF63380 2 100 6.45E-19 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_00609 6ffba1bc2b7c576e5a9f8b0192fc6105 235 Gene3D G3DSA:2.40.30.10 1 101 5.4E-24 T 13-10-2018 VAA_00797 f1ecb134e8e3a7891cf5bf0a0f792a26 239 Pfam PF01728 FtsJ-like methyltransferase 61 237 2.5E-55 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VAA_00797 f1ecb134e8e3a7891cf5bf0a0f792a26 239 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 45 238 28.697 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VAA_00797 f1ecb134e8e3a7891cf5bf0a0f792a26 239 SUPERFAMILY SSF53335 60 239 1.66E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00797 f1ecb134e8e3a7891cf5bf0a0f792a26 239 PIRSF PIRSF005461 27 239 2.0E-80 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VAA_00797 f1ecb134e8e3a7891cf5bf0a0f792a26 239 Gene3D G3DSA:3.40.50.150 60 239 7.6E-59 T 13-10-2018 VAA_00408 54ab5adeaa04043d954a75b7b5787f1f 109 TIGRFAM TIGR00029 S20: ribosomal protein bS20 24 108 4.0E-30 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00408 54ab5adeaa04043d954a75b7b5787f1f 109 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 24 108 17.323 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00408 54ab5adeaa04043d954a75b7b5787f1f 109 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 36 109 1.0E-21 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00408 54ab5adeaa04043d954a75b7b5787f1f 109 SUPERFAMILY SSF46992 26 109 9.94E-31 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00408 54ab5adeaa04043d954a75b7b5787f1f 109 Gene3D G3DSA:1.20.58.110 24 109 2.1E-28 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00408 54ab5adeaa04043d954a75b7b5787f1f 109 Pfam PF01649 Ribosomal protein S20 25 107 6.8E-26 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01172 97881363b4fbcb6cce13d208386be738 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 30.239 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 VAA_01172 97881363b4fbcb6cce13d208386be738 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 146 2.8E-47 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 SUPERFAMILY SSF46785 6 88 1.09E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 Gene3D G3DSA:3.40.190.10 101 292 1.5E-48 T 13-10-2018 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 Gene3D G3DSA:1.10.10.10 5 93 2.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 SUPERFAMILY SSF53850 93 295 2.17E-26 T 13-10-2018 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 Pfam PF03466 LysR substrate binding domain 93 294 3.6E-25 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 6.9E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_0493 c7ff379aba4ddff518816010ac3ee375 296 Gene3D G3DSA:3.40.190.10 161 269 1.5E-48 T 13-10-2018 VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 SUPERFAMILY SSF56784 9 236 6.46E-36 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 2.0E-10 T 13-10-2018 VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 Gene3D G3DSA:1.20.120.1600 24 110 3.8E-58 T 13-10-2018 VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 Gene3D G3DSA:3.40.50.1000 11 231 3.8E-58 T 13-10-2018 IPR023214 HAD superfamily VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 199 5.8E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 4.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 4.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01959 b4d437e2049a2c5a278119e0c7806861 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 4.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01347 7467fba17166ba3577ddd8abbfbfe3c1 245 SUPERFAMILY SSF56281 26 236 6.63E-31 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01347 7467fba17166ba3577ddd8abbfbfe3c1 245 SMART SM00849 29 218 1.2E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01347 7467fba17166ba3577ddd8abbfbfe3c1 245 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 7.8E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01347 7467fba17166ba3577ddd8abbfbfe3c1 245 Gene3D G3DSA:3.60.15.10 7 238 3.9E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_02616 6715f22c03ee2596f06c840d338ca891 888 Pfam PF00311 Phosphoenolpyruvate carboxylase 140 888 1.7E-287 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 SUPERFAMILY SSF51621 17 888 0.0 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 145 156 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 546 558 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 718 744 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 586 615 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 197 213 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 544 564 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 256 271 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 144 157 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 395 415 1.9E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 12 888 17.833 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VAA_02616 6715f22c03ee2596f06c840d338ca891 888 Gene3D G3DSA:1.20.1440.90 284 398 2.4E-27 T 13-10-2018 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 SUPERFAMILY SSF52374 6 316 3.5E-97 T 13-10-2018 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 Gene3D G3DSA:1.10.240.10 218 326 2.7E-34 T 13-10-2018 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 SUPERFAMILY SSF55174 320 394 9.42E-15 T 13-10-2018 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 Gene3D G3DSA:3.10.290.10 327 394 6.5E-16 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 Gene3D G3DSA:3.40.50.620 5 217 5.7E-74 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 2.2E-80 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.113 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 9.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 9.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 9.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 9.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00790 54d41ab5c9d45e59471ff8744312daad 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 1.4E-125 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 Pfam PF01565 FAD binding domain 62 201 5.0E-35 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 Pfam PF13183 4Fe-4S dicluster domain 580 691 3.9E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 Pfam PF02913 FAD linked oxidases, C-terminal domain 286 544 6.9E-62 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 Gene3D G3DSA:3.30.70.2740 424 505 5.5E-5 T 13-10-2018 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 677 688 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 SUPERFAMILY SSF55103 263 547 7.36E-54 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 Gene3D G3DSA:3.30.465.40 28 221 7.8E-46 T 13-10-2018 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 SUPERFAMILY SSF46548 581 695 1.46E-6 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03130 b6578da610b9bb0f4e6d6e9a51fbb428 1021 SUPERFAMILY SSF56176 24 287 3.11E-51 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAA_02610 42231381320d5ae5ab2abd19f02bf58d 328 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 5 328 53.003 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VAA_02610 42231381320d5ae5ab2abd19f02bf58d 328 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 19 323 5.5E-129 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VAA_02610 42231381320d5ae5ab2abd19f02bf58d 328 SUPERFAMILY SSF55681 14 325 1.63E-81 T 13-10-2018 VAA_02610 42231381320d5ae5ab2abd19f02bf58d 328 Gene3D G3DSA:3.30.930.10 4 327 4.5E-111 T 13-10-2018 VAA_02610 42231381320d5ae5ab2abd19f02bf58d 328 Pfam PF00152 tRNA synthetases class II (D, K and N) 17 324 9.9E-46 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_00353 e559f912d1c91f18e36daa3150caeb84 177 ProSitePatterns PS01109 Ribosomal protein L10 signature. 23 57 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00353 e559f912d1c91f18e36daa3150caeb84 177 SUPERFAMILY SSF160369 19 173 2.22E-43 T 13-10-2018 VAA_00353 e559f912d1c91f18e36daa3150caeb84 177 Pfam PF00466 Ribosomal protein L10 20 115 4.0E-26 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VAA_00353 e559f912d1c91f18e36daa3150caeb84 177 Gene3D G3DSA:3.30.70.1730 16 139 2.2E-33 T 13-10-2018 VAA_00353 e559f912d1c91f18e36daa3150caeb84 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 18 174 23.953 T 13-10-2018 IPR022973 Ribosomal protein L10 VAA_03263 880a011ae386bec5451a90418b812836 122 Gene3D G3DSA:3.10.129.10 5 121 1.0E-34 T 13-10-2018 VAA_03263 880a011ae386bec5451a90418b812836 122 SUPERFAMILY SSF54637 17 94 4.32E-12 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03263 880a011ae386bec5451a90418b812836 122 PIRSF PIRSF030962 1 121 5.9E-49 T 13-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 SMART SM01210 330 423 4.0E-54 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 SUPERFAMILY SSF52440 1 103 7.63E-36 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 5.3E-81 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Gene3D G3DSA:3.30.1490.20 121 190 1.4E-28 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Gene3D G3DSA:3.40.50.20 2 95 4.0E-37 T 13-10-2018 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Gene3D G3DSA:3.30.470.20 191 329 9.9E-62 T 13-10-2018 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.3E-183 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.42 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 SUPERFAMILY SSF51246 329 424 1.88E-32 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Gene3D G3DSA:3.90.600.10 330 431 2.3E-34 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 SUPERFAMILY SSF56059 104 323 9.37E-68 T 13-10-2018 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.2E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 SMART SM01209 103 296 9.2E-141 T 13-10-2018 VAA_02534 bd5966b3f17d9c066563f4c5771fe87f 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 8.1E-35 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_01300 307be3e4104708e908ff71fa8fec8a15 274 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 272 5.4E-75 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 VAA_01300 307be3e4104708e908ff71fa8fec8a15 274 Gene3D G3DSA:3.40.190.10 31 271 1.4E-82 T 13-10-2018 VAA_01300 307be3e4104708e908ff71fa8fec8a15 274 Pfam PF12849 PBP superfamily domain 25 259 2.2E-39 T 13-10-2018 IPR024370 PBP domain VAA_01300 307be3e4104708e908ff71fa8fec8a15 274 SUPERFAMILY SSF53850 26 273 5.78E-72 T 13-10-2018 VAA_01300 307be3e4104708e908ff71fa8fec8a15 274 Gene3D G3DSA:3.40.190.10 100 234 1.4E-82 T 13-10-2018 VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 SUPERFAMILY SSF56784 23 255 2.17E-43 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 107 226 1.3E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 Gene3D G3DSA:3.40.50.1000 46 228 5.2E-39 T 13-10-2018 IPR023214 HAD superfamily VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 152 4.8E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 43 54 4.8E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 171 187 4.8E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 Gene3D G3DSA:1.10.150.240 58 125 5.2E-39 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAA_01495 b4aab3811c39e2069e6cf84f4a1d2900 267 Pfam PF13419 Haloacid dehalogenase-like hydrolase 46 225 3.1E-24 T 13-10-2018 VAA_02066 94448e8ae132ba6988ac72d87d20c528 222 SUPERFAMILY SSF102114 27 124 1.83E-6 T 13-10-2018 VAA_02066 94448e8ae132ba6988ac72d87d20c528 222 Pfam PF13394 4Fe-4S single cluster domain 23 127 4.6E-11 T 13-10-2018 VAA_02066 94448e8ae132ba6988ac72d87d20c528 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 7.9E-109 T 13-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VAA_02066 94448e8ae132ba6988ac72d87d20c528 222 Gene3D G3DSA:3.20.20.70 1 222 2.1E-53 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02066 94448e8ae132ba6988ac72d87d20c528 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.28 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VAA_02066 94448e8ae132ba6988ac72d87d20c528 222 PIRSF PIRSF000370 1 222 9.9E-67 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VAA_00610 490b0d987b0548b291509dde4e80b633 89 Gene3D G3DSA:3.10.20.30 1 89 1.7E-23 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_00610 490b0d987b0548b291509dde4e80b633 89 SUPERFAMILY SSF54292 1 87 1.02E-26 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_00610 490b0d987b0548b291509dde4e80b633 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAA_00610 490b0d987b0548b291509dde4e80b633 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 80 4.1E-14 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 Gene3D G3DSA:1.10.287.950 320 652 5.7E-72 T 13-10-2018 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 Pfam PF02743 Cache domain 35 282 4.9E-29 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 SMART SM00304 320 374 2.9E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 Gene3D G3DSA:3.30.450.20 114 196 4.0E-29 T 13-10-2018 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 SMART SM00283 389 650 1.3E-75 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 617 1.5E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 Gene3D G3DSA:3.30.450.20 197 293 4.0E-29 T 13-10-2018 VAA_03092 e44b6711bb17ee7d1817b2e03e8317a3 652 SUPERFAMILY SSF58104 342 651 1.7E-75 T 13-10-2018 VAA_02967 45c2775131d27a82ba0b2dd81e440546 147 PIRSF PIRSF006019 1 146 5.8E-44 T 13-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VAA_02967 45c2775131d27a82ba0b2dd81e440546 147 Gene3D G3DSA:3.40.140.10 2 144 6.4E-40 T 13-10-2018 VAA_02967 45c2775131d27a82ba0b2dd81e440546 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VAA_02967 45c2775131d27a82ba0b2dd81e440546 147 SUPERFAMILY SSF53927 7 127 1.26E-30 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_02967 45c2775131d27a82ba0b2dd81e440546 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 1.1E-25 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VAA_01034 825f4565aa47eb97b4470f51de9f515a 323 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 4 323 8.8E-152 T 13-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 VAA_01034 825f4565aa47eb97b4470f51de9f515a 323 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 230 322 2.4E-45 T 13-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 VAA_01034 825f4565aa47eb97b4470f51de9f515a 323 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 175 2.4E-64 T 13-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 VAA_01933 74d6871064c56bfc4670701f5a2ad3c8 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 2.1E-76 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_01933 74d6871064c56bfc4670701f5a2ad3c8 218 Gene3D G3DSA:3.90.870.10 6 218 1.2E-86 T 13-10-2018 VAA_01933 74d6871064c56bfc4670701f5a2ad3c8 218 SUPERFAMILY SSF55821 10 213 3.2E-81 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAA_01933 74d6871064c56bfc4670701f5a2ad3c8 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.368 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_01933 74d6871064c56bfc4670701f5a2ad3c8 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 8.1E-78 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_00654 45badb0e5c48c8f05d6ed6a8e82cb6f5 306 Gene3D G3DSA:2.30.30.830 109 176 1.3E-27 T 13-10-2018 VAA_00654 45badb0e5c48c8f05d6ed6a8e82cb6f5 306 Gene3D G3DSA:2.30.42.10 202 306 4.1E-28 T 13-10-2018 VAA_00654 45badb0e5c48c8f05d6ed6a8e82cb6f5 306 SUPERFAMILY SSF50156 211 305 8.22E-18 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_00654 45badb0e5c48c8f05d6ed6a8e82cb6f5 306 Pfam PF11356 Type II secretion system protein C 36 175 5.3E-43 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal VAA_00654 45badb0e5c48c8f05d6ed6a8e82cb6f5 306 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 306 4.1E-85 T 13-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VAA_00654 45badb0e5c48c8f05d6ed6a8e82cb6f5 306 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 244 270 - T 13-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 Pfam PF16363 GDP-mannose 4,6 dehydratase 14 334 1.4E-59 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 Gene3D G3DSA:3.90.25.10 203 338 4.0E-141 T 13-10-2018 VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 PRINTS PR01713 Nucleotide sugar epimerase signature 265 280 7.7E-6 T 13-10-2018 VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 7.7E-6 T 13-10-2018 VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 PRINTS PR01713 Nucleotide sugar epimerase signature 304 321 7.7E-6 T 13-10-2018 VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 Gene3D G3DSA:3.40.50.720 13 283 4.0E-141 T 13-10-2018 VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 SUPERFAMILY SSF51735 11 345 2.11E-98 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01509 2c6451a476935d82c1cd3ee5b7ec94ca 348 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 12 344 6.9E-141 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VAA_03690 5ac92e4ec96cea9378e883babe82a170 311 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 5.1E-136 T 13-10-2018 IPR005911 Protein YhcC-like GO:0051536 VAA_03690 5ac92e4ec96cea9378e883babe82a170 311 Gene3D G3DSA:3.80.30.20 41 279 2.0E-18 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VAA_03690 5ac92e4ec96cea9378e883babe82a170 311 SUPERFAMILY SSF102114 13 268 5.69E-49 T 13-10-2018 VAA_03690 5ac92e4ec96cea9378e883babe82a170 311 Pfam PF04055 Radical SAM superfamily 43 201 1.1E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_03690 5ac92e4ec96cea9378e883babe82a170 311 SMART SM00729 23 247 1.5E-42 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VAA_03690 5ac92e4ec96cea9378e883babe82a170 311 Pfam PF16199 Radical_SAM C-terminal domain 209 279 2.7E-18 T 13-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VAA_02948 86d0d46befa9dc6119f6f730586a752b 527 SMART SM00052 266 513 3.1E-81 T 13-10-2018 IPR001633 EAL domain VAA_02948 86d0d46befa9dc6119f6f730586a752b 527 Gene3D G3DSA:3.20.20.450 265 523 3.0E-74 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02948 86d0d46befa9dc6119f6f730586a752b 527 Pfam PF12792 CSS motif domain associated with EAL 48 242 3.8E-29 T 13-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VAA_02948 86d0d46befa9dc6119f6f730586a752b 527 SUPERFAMILY SSF141868 273 520 6.8E-73 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02948 86d0d46befa9dc6119f6f730586a752b 527 Pfam PF00563 EAL domain 273 508 1.1E-60 T 13-10-2018 IPR001633 EAL domain VAA_02856 0bf687ffc05581ee6965b419b77f4552 216 Gene3D G3DSA:3.40.190.10 115 197 4.0E-18 T 13-10-2018 VAA_02856 0bf687ffc05581ee6965b419b77f4552 216 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 204 2.7E-13 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_02856 0bf687ffc05581ee6965b419b77f4552 216 Gene3D G3DSA:3.40.190.10 42 114 4.0E-18 T 13-10-2018 VAA_02856 0bf687ffc05581ee6965b419b77f4552 216 SUPERFAMILY SSF53850 35 198 6.62E-29 T 13-10-2018 VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 SMART SM00086 420 462 1.5E-5 T 13-10-2018 IPR001610 PAC motif VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 469 9.1E-20 T 13-10-2018 IPR000014 PAS domain VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 475 622 3.8E-38 T 13-10-2018 IPR000160 GGDEF domain VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 471 626 1.7E-40 T 13-10-2018 IPR000160 GGDEF domain VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 SUPERFAMILY SSF103190 40 209 4.24E-38 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 SMART SM00267 462 627 1.4E-47 T 13-10-2018 IPR000160 GGDEF domain VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 Pfam PF13426 PAS domain 360 460 6.7E-13 T 13-10-2018 IPR000014 PAS domain VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 Gene3D G3DSA:3.30.450.20 335 471 1.1E-27 T 13-10-2018 VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 SUPERFAMILY SSF55073 478 626 1.18E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 Gene3D G3DSA:3.30.70.270 472 631 1.1E-46 T 13-10-2018 VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 Gene3D G3DSA:3.30.450.20 75 209 1.7E-28 T 13-10-2018 VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 SUPERFAMILY SSF55785 360 471 7.73E-24 T 13-10-2018 IPR035965 PAS domain superfamily VAA_01571 65c00a5fa1b1efe98c7123fe228ec50c 636 SUPERFAMILY SSF103190 214 305 2.59E-7 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 313 2.7E-41 T 13-10-2018 IPR000160 GGDEF domain VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 Pfam PF08448 PAS fold 21 135 8.9E-8 T 13-10-2018 IPR013656 PAS fold-4 VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 316 1.1E-42 T 13-10-2018 IPR000160 GGDEF domain VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 SUPERFAMILY SSF55073 158 318 3.45E-41 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 Gene3D G3DSA:3.30.70.270 143 319 9.3E-46 T 13-10-2018 VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 SMART SM00267 142 318 3.8E-49 T 13-10-2018 IPR000160 GGDEF domain VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 SUPERFAMILY SSF55785 9 133 4.61E-8 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02377 9f8875dccfe9cc683550bf05b2f17be5 321 Gene3D G3DSA:3.30.450.20 8 142 1.8E-10 T 13-10-2018 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 SUPERFAMILY SSF56784 13 234 1.1E-58 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 203 8.5E-39 T 13-10-2018 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 16 27 3.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 118 131 3.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 165 3.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 199 3.9E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 204 1.7E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 16 235 33.745 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 Gene3D G3DSA:3.40.50.1000 19 225 1.1E-62 T 13-10-2018 IPR023214 HAD superfamily VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 100 202 9.0E-14 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 Gene3D G3DSA:1.10.150.240 31 104 1.1E-62 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAA_02638 6685119b02fb17fd3a8bc6ac1e681736 238 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 19 234 1.5E-56 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 Gene3D G3DSA:3.40.50.300 352 597 6.0E-82 T 13-10-2018 VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 Pfam PF00664 ABC transporter transmembrane region 63 313 1.8E-32 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 SUPERFAMILY SSF52540 355 592 2.87E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 SMART SM00382 385 572 5.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 Gene3D G3DSA:1.20.1560.10 11 340 1.1E-56 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 SUPERFAMILY SSF90123 12 345 1.7E-57 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01874 3e3cea971f2baf88838a87aa6b8f27d2 598 Pfam PF00005 ABC transporter 376 524 3.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 197 2.8E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 SUPERFAMILY SSF46894 125 198 6.12E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 9.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 9.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 9.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 SMART SM00421 141 198 8.4E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 Gene3D G3DSA:3.40.50.12740 3 201 1.5E-51 T 13-10-2018 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 SMART SM00448 3 113 9.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 Pfam PF00072 Response regulator receiver domain 5 114 8.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00941 ee2ff9ef094d4a1a37023f9ff1c4c057 202 SUPERFAMILY SSF52172 2 126 9.68E-26 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03264 89ffe2c90d2c89c0352ae2151ee6c2d4 576 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 350 564 2.1E-12 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAA_03264 89ffe2c90d2c89c0352ae2151ee6c2d4 576 Pfam PF00535 Glycosyl transferase family 2 11 130 3.0E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_03264 89ffe2c90d2c89c0352ae2151ee6c2d4 576 SUPERFAMILY SSF53448 10 242 3.0E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_03264 89ffe2c90d2c89c0352ae2151ee6c2d4 576 Gene3D G3DSA:3.90.550.10 6 267 2.8E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02882 96178bddc228a6b59479b879ebbbe0ab 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 201 6.7E-27 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02882 96178bddc228a6b59479b879ebbbe0ab 215 Gene3D G3DSA:3.20.20.70 1 215 3.0E-73 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02882 96178bddc228a6b59479b879ebbbe0ab 215 SMART SM00934 5 207 5.1E-24 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02882 96178bddc228a6b59479b879ebbbe0ab 215 SUPERFAMILY SSF51366 3 211 3.14E-34 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_03528 1538b575e8658d4188e3bf8addcf7b9a 141 Gene3D G3DSA:1.20.58.300 1 70 5.1E-6 T 13-10-2018 VAA_03528 1538b575e8658d4188e3bf8addcf7b9a 141 Pfam PF05130 FlgN protein 3 131 3.8E-25 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VAA_03528 1538b575e8658d4188e3bf8addcf7b9a 141 SUPERFAMILY SSF140566 2 113 4.32E-22 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VAA_02439 a1b4df795545614a36203df84ae69740 362 SMART SM00530 13 67 5.3E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_02439 a1b4df795545614a36203df84ae69740 362 Pfam PF06114 IrrE N-terminal-like domain 162 280 2.4E-16 T 13-10-2018 IPR010359 IrrE N-terminal-like domain VAA_02439 a1b4df795545614a36203df84ae69740 362 Gene3D G3DSA:1.10.260.40 10 109 1.6E-9 T 13-10-2018 VAA_02439 a1b4df795545614a36203df84ae69740 362 SUPERFAMILY SSF47413 8 70 2.37E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_02439 a1b4df795545614a36203df84ae69740 362 Pfam PF01381 Helix-turn-helix 14 66 2.5E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01620 56629c4349f282448ab2124eb604db0a 325 TIGRFAM TIGR00874 talAB: transaldolase 12 325 5.6E-154 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAA_01620 56629c4349f282448ab2124eb604db0a 325 Gene3D G3DSA:3.20.20.70 11 325 6.8E-138 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01620 56629c4349f282448ab2124eb604db0a 325 Hamap MF_00492 Transaldolase [tal]. 11 325 50.728 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAA_01620 56629c4349f282448ab2124eb604db0a 325 SUPERFAMILY SSF51569 10 324 3.04E-113 T 13-10-2018 VAA_01620 56629c4349f282448ab2124eb604db0a 325 ProSitePatterns PS01054 Transaldolase signature 1. 40 48 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAA_01620 56629c4349f282448ab2124eb604db0a 325 ProSitePatterns PS00958 Transaldolase active site. 138 155 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAA_01620 56629c4349f282448ab2124eb604db0a 325 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 23 319 2.4E-100 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VAA_03655 e12787949a99a945cc0165725588d8da 294 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 3 94 2.1E-7 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VAA_03655 e12787949a99a945cc0165725588d8da 294 Pfam PF01554 MatE 95 252 1.1E-19 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02260 8d5d7452d1324ca88453635ad2b421f3 129 Gene3D G3DSA:3.30.300.250 18 129 3.9E-43 T 13-10-2018 VAA_02260 8d5d7452d1324ca88453635ad2b421f3 129 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 13 127 2.6E-49 T 13-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VAA_02260 8d5d7452d1324ca88453635ad2b421f3 129 PIRSF PIRSF007010 1 129 4.0E-49 T 13-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VAA_01330 8987ba8c749cf00c9a48e1567821b0d9 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 180 434 4.4E-13 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VAA_01330 8987ba8c749cf00c9a48e1567821b0d9 442 Gene3D G3DSA:3.60.10.10 176 439 4.4E-65 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_01330 8987ba8c749cf00c9a48e1567821b0d9 442 SUPERFAMILY SSF56219 174 441 2.75E-64 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 9.0E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 Gene3D G3DSA:3.55.40.10 33 192 1.1E-47 T 13-10-2018 VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 SUPERFAMILY SSF54523 7 75 8.63E-7 T 13-10-2018 VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.5E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 Pfam PF12019 Type II transport protein GspH 42 179 6.4E-11 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 183 3.6E-17 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 1.0E-21 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 1.0E-21 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAA_00649 ab4e2ada3a309be5ec6b0ff2e66a17ce 192 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 1.0E-21 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VAA_02689 56d99e27b7bbe2304e55fdee4017afeb 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.967 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VAA_02689 56d99e27b7bbe2304e55fdee4017afeb 144 SUPERFAMILY SSF52080 4 143 3.92E-46 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VAA_02689 56d99e27b7bbe2304e55fdee4017afeb 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.8E-31 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P VAA_02689 56d99e27b7bbe2304e55fdee4017afeb 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02689 56d99e27b7bbe2304e55fdee4017afeb 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 4.7E-50 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02689 56d99e27b7bbe2304e55fdee4017afeb 144 Gene3D G3DSA:3.100.10.10 70 144 1.6E-13 T 13-10-2018 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 6.5E-230 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 SUPERFAMILY SSF50447 205 301 1.16E-28 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_00256 f281005c3475ab77521fde75ba4744ee 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.185 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Gene3D G3DSA:3.40.50.300 1 203 4.9E-70 T 13-10-2018 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.7E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VAA_00256 f281005c3475ab77521fde75ba4744ee 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.6E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Gene3D G3DSA:2.40.30.10 338 393 1.0E-28 T 13-10-2018 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.7E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_00256 f281005c3475ab77521fde75ba4744ee 394 SUPERFAMILY SSF52540 6 219 5.81E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00256 f281005c3475ab77521fde75ba4744ee 394 Gene3D G3DSA:2.40.30.10 206 334 9.3E-51 T 13-10-2018 VAA_02518 8ed008f0ab8f63630312914937bcd95b 328 Gene3D G3DSA:3.40.50.2000 143 308 6.4E-27 T 13-10-2018 VAA_02518 8ed008f0ab8f63630312914937bcd95b 328 Pfam PF13439 Glycosyltransferase Family 4 45 146 5.5E-7 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VAA_02518 8ed008f0ab8f63630312914937bcd95b 328 Pfam PF00534 Glycosyl transferases group 1 157 296 1.9E-9 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VAA_02518 8ed008f0ab8f63630312914937bcd95b 328 Gene3D G3DSA:3.40.50.2000 41 321 6.4E-27 T 13-10-2018 VAA_02518 8ed008f0ab8f63630312914937bcd95b 328 SUPERFAMILY SSF53756 39 321 8.9E-31 T 13-10-2018 VAA_00947 38967c682708318809ea3fded1b41b11 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 23.975 T 13-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VAA_00947 38967c682708318809ea3fded1b41b11 199 SUPERFAMILY SSF75217 1 198 2.49E-64 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_00947 38967c682708318809ea3fded1b41b11 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 196 4.0E-57 T 13-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VAA_00947 38967c682708318809ea3fded1b41b11 199 Gene3D G3DSA:3.40.1280.10 1 198 3.7E-57 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 Pfam PF00501 AMP-binding enzyme 93 531 1.6E-90 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 270 281 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 11 654 52.475 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 Gene3D G3DSA:3.40.50.12780 59 524 1.0E-103 T 13-10-2018 VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 Pfam PF13193 AMP-binding enzyme C-terminal domain 540 618 1.9E-24 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 SUPERFAMILY SSF56801 20 652 8.11E-182 T 13-10-2018 VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 29 652 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 Gene3D G3DSA:3.30.300.30 527 658 5.8E-30 T 13-10-2018 VAA_02547 6d56f80d06bfa73eb0429fc7da52ae13 658 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 33 90 3.5E-20 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VAA_01985 ac81ac25471c0217ab67c8e95e551f17 170 Gene3D G3DSA:3.30.70.260 83 170 3.9E-13 T 13-10-2018 VAA_01985 ac81ac25471c0217ab67c8e95e551f17 170 Pfam PF13740 ACT domain 4 66 3.0E-9 T 13-10-2018 VAA_01985 ac81ac25471c0217ab67c8e95e551f17 170 PIRSF PIRSF028103 1 170 1.1E-44 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VAA_01985 ac81ac25471c0217ab67c8e95e551f17 170 SUPERFAMILY SSF55021 88 167 2.54E-12 T 13-10-2018 VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.0E-112 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 Gene3D G3DSA:3.40.50.2300 1 126 8.1E-39 T 13-10-2018 VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 SMART SM00862 150 225 8.4E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 Gene3D G3DSA:1.10.10.10 127 228 5.9E-40 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 SUPERFAMILY SSF52172 3 184 4.38E-43 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 SMART SM00448 3 116 2.8E-45 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00543 4eccd9ecf78331c1860f340695ad292b 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.5E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_01168 4335dd9d812bc296e7ef8428b612b4e3 106 PIRSF PIRSF006257 1 106 5.0E-37 T 13-10-2018 IPR007384 Protein of unknown function UCP006257 VAA_01168 4335dd9d812bc296e7ef8428b612b4e3 106 SUPERFAMILY SSF158452 1 102 2.75E-34 T 13-10-2018 IPR036814 YqcC-like superfamily VAA_01168 4335dd9d812bc296e7ef8428b612b4e3 106 Pfam PF04287 tRNA pseudouridine synthase C 7 101 8.7E-33 T 13-10-2018 IPR023376 YqcC-like domain VAA_01168 4335dd9d812bc296e7ef8428b612b4e3 106 Gene3D G3DSA:1.20.1440.40 1 103 3.2E-32 T 13-10-2018 IPR036814 YqcC-like superfamily VAA_00518 a703e3428a8c40787a499661f8f47a2b 127 Gene3D G3DSA:3.90.1010.10 1 127 1.1E-58 T 13-10-2018 VAA_00518 a703e3428a8c40787a499661f8f47a2b 127 SUPERFAMILY SSF82649 1 125 7.06E-48 T 13-10-2018 VAA_00518 a703e3428a8c40787a499661f8f47a2b 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 6.9E-69 T 13-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VAA_00518 a703e3428a8c40787a499661f8f47a2b 127 Pfam PF01592 NifU-like N terminal domain 2 126 2.5E-56 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VAA_01894 d09e687313b4649d18f1b937153a1c8b 104 ProSitePatterns PS00151 Acylphosphatase signature 2. 46 62 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAA_01894 d09e687313b4649d18f1b937153a1c8b 104 ProSitePatterns PS00150 Acylphosphatase signature 1. 22 32 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAA_01894 d09e687313b4649d18f1b937153a1c8b 104 SUPERFAMILY SSF54975 14 103 1.77E-25 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAA_01894 d09e687313b4649d18f1b937153a1c8b 104 Pfam PF00708 Acylphosphatase 19 103 1.5E-24 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VAA_01894 d09e687313b4649d18f1b937153a1c8b 104 Gene3D G3DSA:3.30.70.100 13 104 1.9E-30 T 13-10-2018 VAA_00424 4f43720668c4b02b60cbe506e7f80f9f 369 Gene3D G3DSA:3.20.20.70 12 358 7.3E-158 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00424 4f43720668c4b02b60cbe506e7f80f9f 369 Pfam PF00793 DAHP synthetase I family 51 350 9.6E-105 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_00424 4f43720668c4b02b60cbe506e7f80f9f 369 SUPERFAMILY SSF51569 18 355 6.04E-139 T 13-10-2018 VAA_00424 4f43720668c4b02b60cbe506e7f80f9f 369 PIRSF PIRSF001361 6 364 3.9E-164 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAA_00424 4f43720668c4b02b60cbe506e7f80f9f 369 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 20 356 1.1E-162 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 SUPERFAMILY SSF100950 77 233 4.67E-32 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 SUPERFAMILY SSF46785 9 65 5.57E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 3.3E-15 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 SMART SM00420 9 61 2.3E-14 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 Pfam PF00455 DeoR C terminal sensor domain 77 233 1.9E-45 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VAA_00176 22716bef49ef4fa69654c886fa0af8e4 253 SMART SM01134 73 234 5.5E-57 T 13-10-2018 VAA_03521 3eea6ef1913cc7ca10ff178fa3519836 235 Pfam PF13860 FlgD Ig-like domain 117 184 5.3E-20 T 13-10-2018 IPR025965 FlgD Ig-like domain VAA_03521 3eea6ef1913cc7ca10ff178fa3519836 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 1.6E-21 T 13-10-2018 IPR005648 Flagellar hook capping protein VAA_03521 3eea6ef1913cc7ca10ff178fa3519836 235 Gene3D G3DSA:2.30.30.910 94 221 2.1E-36 T 13-10-2018 VAA_03521 3eea6ef1913cc7ca10ff178fa3519836 235 Gene3D G3DSA:2.60.40.4070 110 196 2.1E-36 T 13-10-2018 VAA_03521 3eea6ef1913cc7ca10ff178fa3519836 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.8E-15 T 13-10-2018 IPR025963 FlgD Tudor-like domain VAA_0096 11cdd00240ff82d101eb16b50748beab 407 SUPERFAMILY SSF52540 110 370 3.01E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_0096 11cdd00240ff82d101eb16b50748beab 407 Pfam PF13614 AAA domain 112 298 7.0E-23 T 13-10-2018 IPR025669 AAA domain VAA_0096 11cdd00240ff82d101eb16b50748beab 407 Gene3D G3DSA:1.10.1660.30 38 113 2.5E-5 T 13-10-2018 VAA_0096 11cdd00240ff82d101eb16b50748beab 407 Gene3D G3DSA:3.40.50.300 114 399 9.6E-57 T 13-10-2018 VAA_01393 d358bdc57c32b7ff9dc0a936b6bf882c 298 Gene3D G3DSA:3.30.420.40 118 286 6.3E-79 T 13-10-2018 VAA_01393 d358bdc57c32b7ff9dc0a936b6bf882c 298 SUPERFAMILY SSF53067 1 297 9.48E-60 T 13-10-2018 VAA_01393 d358bdc57c32b7ff9dc0a936b6bf882c 298 ProSitePatterns PS01125 ROK family signature. 129 156 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_01393 d358bdc57c32b7ff9dc0a936b6bf882c 298 Pfam PF00480 ROK family 3 295 9.8E-75 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_01393 d358bdc57c32b7ff9dc0a936b6bf882c 298 Gene3D G3DSA:3.30.420.40 4 293 6.3E-79 T 13-10-2018 VAA_00341 c0b735197fe123984b93443aae1b8ed6 295 SUPERFAMILY SSF103481 36 141 1.15E-8 T 13-10-2018 VAA_00341 c0b735197fe123984b93443aae1b8ed6 295 Pfam PF00892 EamA-like transporter family 4 134 1.1E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_00341 c0b735197fe123984b93443aae1b8ed6 295 Pfam PF00892 EamA-like transporter family 156 294 7.6E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_00341 c0b735197fe123984b93443aae1b8ed6 295 SUPERFAMILY SSF103481 214 294 1.96E-8 T 13-10-2018 VAA_02351 8e33ff03025dea7388a764d30e515344 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VAA_02351 8e33ff03025dea7388a764d30e515344 199 SUPERFAMILY SSF111304 2 199 3.53E-72 T 13-10-2018 IPR023627 Recombination protein RecR VAA_02351 8e33ff03025dea7388a764d30e515344 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 5.7E-78 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VAA_02351 8e33ff03025dea7388a764d30e515344 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.575 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VAA_02351 8e33ff03025dea7388a764d30e515344 199 SMART SM00493 81 166 1.9E-16 T 13-10-2018 IPR006171 TOPRIM domain VAA_02351 8e33ff03025dea7388a764d30e515344 199 Pfam PF13662 Toprim domain 82 172 4.1E-23 T 13-10-2018 IPR006171 TOPRIM domain VAA_02351 8e33ff03025dea7388a764d30e515344 199 Gene3D G3DSA:1.10.8.420 1 53 4.4E-19 T 13-10-2018 VAA_02351 8e33ff03025dea7388a764d30e515344 199 Pfam PF02132 RecR protein 41 77 5.7E-16 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VAA_02351 8e33ff03025dea7388a764d30e515344 199 Gene3D G3DSA:3.40.1360.10 78 199 2.2E-39 T 13-10-2018 VAA_03197 b44adaf688214fc80ff91d2b4ac47893 250 Gene3D G3DSA:3.90.550.10 1 250 4.8E-95 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_03197 b44adaf688214fc80ff91d2b4ac47893 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.801 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VAA_03197 b44adaf688214fc80ff91d2b4ac47893 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 8.2E-116 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VAA_03197 b44adaf688214fc80ff91d2b4ac47893 250 SUPERFAMILY SSF53448 3 246 4.51E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_03197 b44adaf688214fc80ff91d2b4ac47893 250 Pfam PF02348 Cytidylyltransferase 5 221 1.1E-67 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 SUPERFAMILY SSF56235 13 429 6.18E-147 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 SUPERFAMILY SSF51395 434 1191 1.34E-250 T 13-10-2018 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.5E-176 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 SUPERFAMILY SSF69336 1212 1464 1.06E-85 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.4E-104 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Pfam PF01493 GXGXG motif 1236 1420 2.2E-72 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Gene3D G3DSA:2.160.20.60 1200 1468 1.1E-98 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VAA_03693 92ef3f642041cd14b6020a354e9185a3 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.3E-151 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 SUPERFAMILY SSF52096 23 206 1.44E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 13-10-2018 IPR033135 ClpP, histidine active site VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 Pfam PF00574 Clp protease 25 205 5.4E-90 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.1E-107 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 Gene3D G3DSA:3.90.226.10 5 207 7.3E-85 T 13-10-2018 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 13-10-2018 IPR018215 ClpP, Ser active site VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.537 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_02297 9f583fbd9d0b74ca90b8a769ceaff994 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 130 247 3.7E-45 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 385 1.6E-69 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 275 283 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 SUPERFAMILY SSF55973 19 125 1.88E-46 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 18 397 58.553 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 132 142 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 21 395 2.5E-196 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Gene3D G3DSA:3.30.300.10 21 249 2.8E-178 T 13-10-2018 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 PIRSF PIRSF000497 15 397 4.0E-174 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 20 117 1.7E-42 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 SUPERFAMILY SSF55973 127 248 2.39E-51 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Gene3D G3DSA:3.30.300.10 118 389 2.8E-178 T 13-10-2018 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 Gene3D G3DSA:3.30.300.10 27 286 2.8E-178 T 13-10-2018 VAA_01648 4e0cdcdd4e571400f03e2f265fa2cd94 400 SUPERFAMILY SSF55973 249 398 7.46E-71 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VAA_00564 012ebcc3c89762ecc8cb9cfe1dab7d70 253 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 27 214 1.1E-43 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal VAA_00564 012ebcc3c89762ecc8cb9cfe1dab7d70 253 SMART SM01007 26 214 8.2E-60 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal VAA_00564 012ebcc3c89762ecc8cb9cfe1dab7d70 253 Gene3D G3DSA:3.40.225.10 21 247 3.7E-57 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VAA_00564 012ebcc3c89762ecc8cb9cfe1dab7d70 253 SUPERFAMILY SSF53639 22 239 6.67E-66 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VAA_03381 6af5f032bdc721ed03e8fdbf72e4b4ae 174 Pfam PF10975 Protein of unknown function (DUF2802) 77 144 1.6E-22 T 13-10-2018 IPR021244 Protein of unknown function DUF2802 VAA_01654 09055b3f5c7c89239d5e97a13c542f37 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 140 23.227 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VAA_01654 09055b3f5c7c89239d5e97a13c542f37 142 Gene3D G3DSA:3.30.420.140 2 139 3.3E-38 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VAA_01654 09055b3f5c7c89239d5e97a13c542f37 142 Pfam PF03652 Holliday junction resolvase 5 137 7.3E-35 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VAA_01654 09055b3f5c7c89239d5e97a13c542f37 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 137 8.9E-46 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VAA_01654 09055b3f5c7c89239d5e97a13c542f37 142 SUPERFAMILY SSF53098 4 137 8.04E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_01654 09055b3f5c7c89239d5e97a13c542f37 142 SMART SM00732 4 105 2.7E-34 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 SUPERFAMILY SSF56601 334 765 9.68E-108 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 Gene3D G3DSA:3.30.2060.10 83 172 7.0E-259 T 13-10-2018 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 185 719 1.9E-153 T 13-10-2018 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 Pfam PF14814 Bifunctional transglycosylase second domain 85 168 1.1E-24 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 SUPERFAMILY SSF53955 176 376 4.5E-69 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 40 762 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 Pfam PF00905 Penicillin binding protein transpeptidase domain 444 682 1.0E-21 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 Pfam PF00912 Transglycosylase 181 352 1.9E-59 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 Gene3D G3DSA:3.40.710.10 75 732 7.0E-259 T 13-10-2018 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 Gene3D G3DSA:1.10.3810.10 173 376 7.0E-259 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_00759 356548fb5e6d40cd5183c301c51690ee 782 PIRSF PIRSF002799 5 782 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 Gene3D G3DSA:3.40.190.10 165 267 5.9E-59 T 13-10-2018 VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 Gene3D G3DSA:3.40.190.10 93 292 5.9E-59 T 13-10-2018 VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 Pfam PF03466 LysR substrate binding domain 90 294 1.6E-44 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 SUPERFAMILY SSF53850 90 299 5.61E-47 T 13-10-2018 VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 SUPERFAMILY SSF46785 7 90 1.45E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 Gene3D G3DSA:1.10.10.10 5 92 4.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02323 9830115e42764a9e40f8d0e7b1f5907d 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 3.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 55 8.1E-19 T 13-10-2018 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 Pfam PF01037 Lrp/AsnC ligand binding domain 75 148 2.6E-22 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 4.9E-19 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 4.9E-19 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 4.9E-19 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 Gene3D G3DSA:3.30.70.920 61 154 3.5E-24 T 13-10-2018 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 Gene3D G3DSA:1.10.10.10 4 60 5.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 SMART SM00344 9 118 4.3E-47 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 SUPERFAMILY SSF46785 9 99 2.47E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02990 94423b6032b677f6ce40abd68f1e3e74 159 SUPERFAMILY SSF54909 70 157 1.63E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_00426 f1d60d4f64a6b25fbc4f594a84266ee2 125 Pfam PF07238 PilZ domain 3 100 4.2E-14 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VAA_00426 f1d60d4f64a6b25fbc4f594a84266ee2 125 PIRSF PIRSF028141 1 120 2.6E-40 T 13-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VAA_00426 f1d60d4f64a6b25fbc4f594a84266ee2 125 SUPERFAMILY SSF141371 1 120 3.92E-32 T 13-10-2018 VAA_00426 f1d60d4f64a6b25fbc4f594a84266ee2 125 Gene3D G3DSA:2.40.10.220 1 122 1.0E-31 T 13-10-2018 VAA_02758 bd00b5a72b4ba3ea7b3bea9b95b225c8 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 7.5E-52 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VAA_02758 bd00b5a72b4ba3ea7b3bea9b95b225c8 129 Gene3D G3DSA:3.30.1330.40 1 129 2.3E-46 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02758 bd00b5a72b4ba3ea7b3bea9b95b225c8 129 SUPERFAMILY SSF55298 2 128 4.24E-43 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02758 bd00b5a72b4ba3ea7b3bea9b95b225c8 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.8E-43 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAA_02758 bd00b5a72b4ba3ea7b3bea9b95b225c8 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 Pfam PF00005 ABC transporter 489 638 1.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 Gene3D G3DSA:3.90.70.10 18 133 7.6E-8 T 13-10-2018 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 SUPERFAMILY SSF90123 145 456 1.83E-66 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 Pfam PF03412 Peptidase C39 family 14 109 6.6E-7 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 SUPERFAMILY SSF52540 462 708 7.89E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 Pfam PF00664 ABC transporter transmembrane region 161 427 4.2E-47 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 Gene3D G3DSA:1.20.1560.10 144 458 6.5E-72 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 20 709 0.0 T 13-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 SMART SM00382 498 684 8.8E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03091 a41f16e1a85e74edf2c82eaf1d89f8f8 711 Gene3D G3DSA:3.40.50.300 464 710 1.1E-87 T 13-10-2018 VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 Gene3D G3DSA:3.30.420.40 181 292 1.3E-44 T 13-10-2018 VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 1.5E-48 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 Gene3D G3DSA:3.30.420.40 8 325 1.3E-44 T 13-10-2018 VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 SUPERFAMILY SSF53067 5 165 1.13E-5 T 13-10-2018 VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 327 9.3E-93 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 PIRSF PIRSF019169 1 328 3.8E-81 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 SUPERFAMILY SSF53067 185 324 2.71E-5 T 13-10-2018 VAA_02628 a0af040472ffc12c99e3e9256cf98cbf 336 Gene3D G3DSA:3.30.1490.300 82 142 1.3E-44 T 13-10-2018 VAA_02859 765cb1e8ddc7792eb6e6ba254281bdc7 285 SUPERFAMILY SSF53474 33 266 1.22E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02859 765cb1e8ddc7792eb6e6ba254281bdc7 285 Pfam PF12146 Serine aminopeptidase, S33 83 250 9.4E-11 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 VAA_02859 765cb1e8ddc7792eb6e6ba254281bdc7 285 Gene3D G3DSA:3.40.50.1820 66 272 8.6E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00552 961bb5ccafc583573f668ce4337c7556 294 Pfam PF00892 EamA-like transporter family 141 279 3.2E-6 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_00552 961bb5ccafc583573f668ce4337c7556 294 SUPERFAMILY SSF103481 186 278 9.68E-6 T 13-10-2018 VAA_00552 961bb5ccafc583573f668ce4337c7556 294 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 14 277 3.4E-70 T 13-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VAA_01781 cef7b3a7a3eda6d15209a98fc5ebeafa 203 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAA_01781 cef7b3a7a3eda6d15209a98fc5ebeafa 203 Pfam PF01323 DSBA-like thioredoxin domain 44 184 2.6E-29 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VAA_01781 cef7b3a7a3eda6d15209a98fc5ebeafa 203 SUPERFAMILY SSF52833 25 201 1.37E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_01781 cef7b3a7a3eda6d15209a98fc5ebeafa 203 PIRSF PIRSF001488 5 203 2.3E-70 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VAA_01781 cef7b3a7a3eda6d15209a98fc5ebeafa 203 Gene3D G3DSA:3.40.30.10 21 203 1.6E-53 T 13-10-2018 VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 174 329 4.1E-42 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 Gene3D G3DSA:1.10.8.60 335 440 8.3E-40 T 13-10-2018 VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.9E-219 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 8.7E-5 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 SMART SM00382 49 332 1.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 42.95 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 SMART SM01086 335 429 1.3E-19 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.2E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_02590 4f2a5fc08dd561ecfe5337bee28d11ba 443 SUPERFAMILY SSF52540 3 441 3.56E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 Gene3D G3DSA:3.20.20.70 8 64 8.8E-11 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 Gene3D G3DSA:3.20.20.70 73 283 2.0E-35 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 Pfam PF13353 4Fe-4S single cluster domain 21 174 4.7E-9 T 13-10-2018 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 PIRSF PIRSF000371 1 289 3.1E-83 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 Pfam PF04055 Radical SAM superfamily 29 225 2.9E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 2.1E-120 T 13-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 SUPERFAMILY SSF102114 101 255 1.92E-6 T 13-10-2018 VAA_02819 5ec4e62486b4ef67d9cffa29d4cff4bd 293 SUPERFAMILY SSF54862 50 139 6.28E-13 T 13-10-2018 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 Gene3D G3DSA:3.40.50.620 2 317 1.7E-133 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.9E-114 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 SUPERFAMILY SSF48163 302 464 9.02E-50 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 SUPERFAMILY SSF52374 3 301 5.09E-109 T 13-10-2018 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 3.8E-196 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.703 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAA_03535 21bb5d45723cbccfb150d154e77225d0 475 Gene3D G3DSA:1.10.10.350 369 473 1.5E-26 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 7.8E-134 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 2.1E-57 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 SUPERFAMILY SSF53671 4 336 1.13E-100 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 Gene3D G3DSA:3.40.50.1370 5 331 9.7E-143 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 3.7E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.7E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.7E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.7E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.0E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.0E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.0E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.0E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 4.0E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 84.078 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 Gene3D G3DSA:3.40.50.1370 152 321 9.7E-143 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02561 bb5353102f72ed9a938e49e3250fff03 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.4E-45 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VAA_01021 b9d30f9e29d156e4cf4607c2ec43327d 314 PIRSF PIRSF006230 2 280 1.3E-106 T 13-10-2018 IPR016478 GTPase, MTG1 VAA_01021 b9d30f9e29d156e4cf4607c2ec43327d 314 Gene3D G3DSA:1.10.1580.10 177 268 3.0E-30 T 13-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VAA_01021 b9d30f9e29d156e4cf4607c2ec43327d 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 3.0E-109 T 13-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VAA_01021 b9d30f9e29d156e4cf4607c2ec43327d 314 Gene3D G3DSA:3.40.50.300 6 174 1.9E-44 T 13-10-2018 VAA_01021 b9d30f9e29d156e4cf4607c2ec43327d 314 SUPERFAMILY SSF52540 12 189 8.35E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01021 b9d30f9e29d156e4cf4607c2ec43327d 314 Pfam PF01926 50S ribosome-binding GTPase 120 209 5.0E-15 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 Gene3D G3DSA:3.90.1150.10 25 405 1.6E-183 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 Gene3D G3DSA:3.40.640.10 51 302 1.6E-183 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 PIRSF PIRSF000412 6 435 3.5E-164 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 236 252 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 Pfam PF00464 Serine hydroxymethyltransferase 23 399 1.1E-171 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 SUPERFAMILY SSF53383 17 434 1.14E-177 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00999 5224e3e18cad5c041469abb6e6c9ce1d 435 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 21 435 52.218 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_01231 32c8d58d5bc50e029bd90d0560519005 225 Pfam PF11726 Inovirus Gp2 38 223 5.6E-66 T 13-10-2018 VAA_03384 e2e8829992656685fa8bbfd04091b2a5 268 PIRSF PIRSF009320 11 84 1.3E-13 T 13-10-2018 VAA_03384 e2e8829992656685fa8bbfd04091b2a5 268 PIRSF PIRSF009320 113 250 2.1E-7 T 13-10-2018 VAA_03384 e2e8829992656685fa8bbfd04091b2a5 268 SUPERFAMILY SSF52540 11 262 7.37E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03384 e2e8829992656685fa8bbfd04091b2a5 268 Pfam PF13614 AAA domain 13 190 2.7E-50 T 13-10-2018 IPR025669 AAA domain VAA_03384 e2e8829992656685fa8bbfd04091b2a5 268 Gene3D G3DSA:3.40.50.300 4 264 2.2E-68 T 13-10-2018 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 120 153 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 Gene3D G3DSA:3.40.1010.10 39 155 1.1E-42 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 40 273 1.2E-91 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 45 59 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 42 251 5.9E-45 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 SUPERFAMILY SSF53790 36 280 3.01E-77 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VAA_02710 f54fedcdbbedb5345b1f2e50f5aad2c2 292 Gene3D G3DSA:3.30.950.10 156 291 7.5E-46 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VAA_02476 9e9c74ca5b1317cd392d3551ebe686a8 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.9E-157 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VAA_02476 9e9c74ca5b1317cd392d3551ebe686a8 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 3.6E-97 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_02476 9e9c74ca5b1317cd392d3551ebe686a8 354 SUPERFAMILY SSF51735 1 337 3.08E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02476 9e9c74ca5b1317cd392d3551ebe686a8 354 Gene3D G3DSA:3.40.50.720 2 325 6.9E-138 T 13-10-2018 VAA_02476 9e9c74ca5b1317cd392d3551ebe686a8 354 Gene3D G3DSA:3.90.25.10 201 333 6.9E-138 T 13-10-2018 VAA_01013 73429724c6fd44a10990ab536064fa4e 324 Gene3D G3DSA:1.50.10.150 13 321 4.9E-34 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily VAA_01013 73429724c6fd44a10990ab536064fa4e 324 Pfam PF03595 Voltage-dependent anion channel 20 312 2.7E-26 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VAA_02820 432e8785519bf11c73b4f5054e52a575 517 SUPERFAMILY SSF51998 17 466 1.8E-95 T 13-10-2018 VAA_02820 432e8785519bf11c73b4f5054e52a575 517 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 501 2.1E-232 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VAA_02820 432e8785519bf11c73b4f5054e52a575 517 Pfam PF11230 Protein of unknown function (DUF3029) 20 501 1.0E-229 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VAA_02820 432e8785519bf11c73b4f5054e52a575 517 PIRSF PIRSF028991 4 513 1.0E-279 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VAA_02191 a056619445991eb9e7c13221ffd90132 254 SUPERFAMILY SSF55120 75 249 1.92E-42 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02191 a056619445991eb9e7c13221ffd90132 254 Gene3D G3DSA:3.30.70.1560 150 249 1.9E-40 T 13-10-2018 VAA_02191 a056619445991eb9e7c13221ffd90132 254 Gene3D G3DSA:3.30.70.580 74 149 2.5E-26 T 13-10-2018 VAA_02191 a056619445991eb9e7c13221ffd90132 254 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 90 252 7.5E-54 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_02191 a056619445991eb9e7c13221ffd90132 254 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 121 135 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_02191 a056619445991eb9e7c13221ffd90132 254 Pfam PF00849 RNA pseudouridylate synthase 86 230 1.4E-14 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 Gene3D G3DSA:1.10.455.10 2 155 1.9E-63 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 PIRSF PIRSF002122 3 156 9.8E-62 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.508 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 SUPERFAMILY SSF47973 6 149 8.11E-59 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-70 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.3E-64 T 13-10-2018 IPR023798 Ribosomal protein S7 domain VAA_00131 9f6bcf3ac72656f8e23757b8187751e6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 SUPERFAMILY SSF52540 459 692 1.78E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 5.0E-293 T 13-10-2018 IPR017750 ATPase, type I secretion system VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 Pfam PF00005 ABC transporter 487 635 2.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 Pfam PF00664 ABC transporter transmembrane region 158 420 1.6E-23 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 SUPERFAMILY SSF90123 142 452 3.01E-51 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 SMART SM00382 495 681 1.4E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 Gene3D G3DSA:3.90.70.10 1 126 5.0E-36 T 13-10-2018 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 Gene3D G3DSA:1.20.1560.10 142 454 8.6E-59 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_01914 0b52bbe287b2614f05696c019af43bd0 704 Gene3D G3DSA:3.40.50.300 461 703 6.6E-74 T 13-10-2018 VAA_02167 e1100ea0d352967a5412536afbcef748 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.873 T 13-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VAA_02167 e1100ea0d352967a5412536afbcef748 263 Pfam PF13847 Methyltransferase domain 48 154 9.1E-12 T 13-10-2018 IPR025714 Methyltransferase domain VAA_02167 e1100ea0d352967a5412536afbcef748 263 Gene3D G3DSA:3.40.50.150 9 262 3.2E-58 T 13-10-2018 VAA_02167 e1100ea0d352967a5412536afbcef748 263 SUPERFAMILY SSF53335 7 248 1.49E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01636 fb7233955655079bbe47b5918bca93dd 246 Pfam PF07702 UTRA domain 96 233 4.1E-32 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAA_01636 fb7233955655079bbe47b5918bca93dd 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01636 fb7233955655079bbe47b5918bca93dd 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01636 fb7233955655079bbe47b5918bca93dd 246 SMART SM00345 16 75 7.1E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01636 fb7233955655079bbe47b5918bca93dd 246 SMART SM00866 96 235 8.1E-28 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VAA_01636 fb7233955655079bbe47b5918bca93dd 246 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 12 239 6.8E-107 T 13-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VAA_01636 fb7233955655079bbe47b5918bca93dd 246 Gene3D G3DSA:1.10.10.10 11 79 9.2E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01636 fb7233955655079bbe47b5918bca93dd 246 SUPERFAMILY SSF46785 13 79 1.92E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01636 fb7233955655079bbe47b5918bca93dd 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 4.1E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01636 fb7233955655079bbe47b5918bca93dd 246 SUPERFAMILY SSF64288 63 238 1.73E-38 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_01636 fb7233955655079bbe47b5918bca93dd 246 Gene3D G3DSA:3.40.1410.10 83 240 3.6E-30 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 SUPERFAMILY SSF51569 21 351 4.69E-144 T 13-10-2018 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 Pfam PF00490 Delta-aminolevulinic acid dehydratase 28 348 9.7E-141 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PIRSF PIRSF001415 18 352 3.5E-151 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 268 280 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 SMART SM01004 25 349 4.9E-243 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 323 342 8.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 176 195 8.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 284 8.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 293 308 8.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 145 159 8.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 214 233 8.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VAA_00577 d8ce620bb8d416db7d112a2be1b25ad7 364 Gene3D G3DSA:3.20.20.70 17 353 3.5E-147 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03699 75a38ced06f177aa5b26711b72458873 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 271 48.601 T 13-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VAA_03699 75a38ced06f177aa5b26711b72458873 274 Gene3D G3DSA:3.40.50.1980 22 139 6.0E-36 T 13-10-2018 VAA_03699 75a38ced06f177aa5b26711b72458873 274 SUPERFAMILY SSF53807 22 267 1.06E-57 T 13-10-2018 VAA_03699 75a38ced06f177aa5b26711b72458873 274 Pfam PF01497 Periplasmic binding protein 25 246 2.1E-29 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VAA_03699 75a38ced06f177aa5b26711b72458873 274 Gene3D G3DSA:3.40.50.1980 144 268 3.7E-30 T 13-10-2018 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 8.5E-15 T 13-10-2018 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 8.5E-15 T 13-10-2018 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 8.5E-15 T 13-10-2018 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 8.5E-15 T 13-10-2018 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 SUPERFAMILY SSF53597 1 159 1.96E-58 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 Gene3D G3DSA:3.40.430.10 1 160 4.7E-61 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 PIRSF PIRSF000194 1 160 8.5E-64 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VAA_01677 62fbfbdde9a4fd67aa15f418bcbe8f8a 160 Pfam PF00186 Dihydrofolate reductase 3 158 8.9E-62 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VAA_02088 4db9dd3071b47d7535ec92c0a209db7b 138 Gene3D G3DSA:3.10.180.10 3 135 3.7E-51 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_02088 4db9dd3071b47d7535ec92c0a209db7b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.2E-23 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAA_02088 4db9dd3071b47d7535ec92c0a209db7b 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAA_02088 4db9dd3071b47d7535ec92c0a209db7b 138 SUPERFAMILY SSF54593 3 130 2.55E-36 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_02088 4db9dd3071b47d7535ec92c0a209db7b 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 5.2E-69 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAA_02088 4db9dd3071b47d7535ec92c0a209db7b 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAA_00254 339cb5b79a6c0f9cdba594f82208d857 201 Gene3D G3DSA:1.10.1670.10 162 201 3.8E-5 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VAA_00254 339cb5b79a6c0f9cdba594f82208d857 201 Gene3D G3DSA:3.30.310.20 3 58 2.8E-7 T 13-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VAA_00254 339cb5b79a6c0f9cdba594f82208d857 201 SUPERFAMILY SSF48150 48 200 2.09E-28 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAA_00254 339cb5b79a6c0f9cdba594f82208d857 201 Pfam PF06029 AlkA N-terminal domain 4 58 1.1E-12 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VAA_00254 339cb5b79a6c0f9cdba594f82208d857 201 Gene3D G3DSA:1.10.340.30 59 160 2.5E-19 T 13-10-2018 VAA_00254 339cb5b79a6c0f9cdba594f82208d857 201 SUPERFAMILY SSF55945 4 40 3.3E-5 T 13-10-2018 VAA_03213 5022ca14bab832b7e221e22d435cf294 289 Gene3D G3DSA:3.90.1200.10 116 288 3.0E-14 T 13-10-2018 VAA_03213 5022ca14bab832b7e221e22d435cf294 289 Pfam PF01636 Phosphotransferase enzyme family 38 237 3.2E-13 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VAA_03213 5022ca14bab832b7e221e22d435cf294 289 SUPERFAMILY SSF56112 37 276 9.04E-33 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 264 39.445 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 SUPERFAMILY SSF56655 9 274 8.77E-78 T 13-10-2018 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 Gene3D G3DSA:3.40.190.80 164 266 1.6E-26 T 13-10-2018 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 Gene3D G3DSA:3.30.540.10 10 163 7.3E-46 T 13-10-2018 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 12 262 5.1E-107 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 Pfam PF00459 Inositol monophosphatase family 17 255 5.3E-52 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 1.2E-5 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 1.2E-5 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_00642 4c2e3b8665e46aee0931a0814d68cee0 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 1.2E-5 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VAA_02937 9f134d391b5d1ea10561833f8488a22c 682 PIRSF PIRSF036917 1 682 0.0 T 13-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VAA_02937 9f134d391b5d1ea10561833f8488a22c 682 Gene3D G3DSA:3.20.20.80 185 425 6.1E-58 T 13-10-2018 VAA_02937 9f134d391b5d1ea10561833f8488a22c 682 Pfam PF00128 Alpha amylase, catalytic domain 235 603 9.6E-52 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02937 9f134d391b5d1ea10561833f8488a22c 682 Gene3D G3DSA:3.20.20.80 429 651 6.6E-38 T 13-10-2018 VAA_02937 9f134d391b5d1ea10561833f8488a22c 682 SMART SM00642 202 644 1.6E-92 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02937 9f134d391b5d1ea10561833f8488a22c 682 SUPERFAMILY SSF51445 187 653 6.09E-91 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 Pfam PF01909 Nucleotidyltransferase domain 67 107 1.8E-7 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 8.5E-35 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 SUPERFAMILY SSF109604 416 583 1.69E-13 T 13-10-2018 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 SUPERFAMILY SSF81593 200 310 1.1E-8 T 13-10-2018 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 868 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 SUPERFAMILY SSF55021 796 852 2.11E-9 T 13-10-2018 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 333.27 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 Gene3D G3DSA:1.10.3210.10 435 583 1.5E-8 T 13-10-2018 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 PIRSF PIRSF006288 7 874 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 Pfam PF01842 ACT domain 804 844 2.1E-6 T 13-10-2018 IPR002912 ACT domain VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 SMART SM00471 447 594 6.2E-7 T 13-10-2018 IPR003607 HD/PDEase domain VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 SUPERFAMILY SSF55021 689 747 2.89E-8 T 13-10-2018 VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 Pfam PF01966 HD domain 452 584 7.0E-11 T 13-10-2018 IPR006674 HD domain VAA_03579 ebcc629f7d2e5f890c0478bf0817e06a 874 SUPERFAMILY SSF81301 27 172 1.38E-19 T 13-10-2018 VAA_03747 9c2a94ee307a5e0d31beb8b14f1bd76f 127 Pfam PF06853 Protein of unknown function (DUF1249) 10 122 2.9E-40 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 VAA_01435 484095af814e16e61691bd963290765f 193 SUPERFAMILY SSF55729 15 186 3.54E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_01435 484095af814e16e61691bd963290765f 193 Pfam PF13302 Acetyltransferase (GNAT) domain 18 162 3.8E-20 T 13-10-2018 IPR000182 GNAT domain VAA_01435 484095af814e16e61691bd963290765f 193 Gene3D G3DSA:3.40.630.30 15 192 3.3E-45 T 13-10-2018 VAA_01696 42369e3f2909471a31647fb4989012ff 439 Pfam PF07804 HipA-like C-terminal domain 153 402 3.3E-48 T 13-10-2018 IPR012893 HipA-like, C-terminal VAA_01696 42369e3f2909471a31647fb4989012ff 439 Pfam PF13657 HipA N-terminal domain 17 111 4.5E-16 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_01696 42369e3f2909471a31647fb4989012ff 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 15 111 5.3E-21 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 VAA_01446 45aab7894fbabdf96b9567b064e8abd8 364 Gene3D G3DSA:1.10.3820.10 2 181 1.4E-34 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VAA_01446 45aab7894fbabdf96b9567b064e8abd8 364 PIRSF PIRSF000014 1 364 2.3E-145 T 13-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VAA_01446 45aab7894fbabdf96b9567b064e8abd8 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 174 1.1E-66 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VAA_01446 45aab7894fbabdf96b9567b064e8abd8 364 SUPERFAMILY SSF48695 12 179 5.92E-48 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VAA_02608 481221e850204d17de56edc42d04add0 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.6E-96 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02608 481221e850204d17de56edc42d04add0 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAA_02608 481221e850204d17de56edc42d04add0 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_02608 481221e850204d17de56edc42d04add0 252 SUPERFAMILY SSF54292 5 106 2.36E-30 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_02608 481221e850204d17de56edc42d04add0 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.1E-33 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02608 481221e850204d17de56edc42d04add0 252 SUPERFAMILY SSF46548 107 226 2.62E-30 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_02608 481221e850204d17de56edc42d04add0 252 Gene3D G3DSA:1.10.1060.10 107 244 1.2E-50 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_02608 481221e850204d17de56edc42d04add0 252 Gene3D G3DSA:3.10.20.30 1 106 9.0E-36 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_02608 481221e850204d17de56edc42d04add0 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 7.2E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_02013 9aacbab6738797ba14732c1edba007ef 330 SUPERFAMILY SSF53850 31 234 9.77E-7 T 13-10-2018 VAA_02013 9aacbab6738797ba14732c1edba007ef 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 325 2.7E-25 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VAA_02013 9aacbab6738797ba14732c1edba007ef 330 Gene3D G3DSA:3.40.190.10 128 256 3.1E-66 T 13-10-2018 VAA_02013 9aacbab6738797ba14732c1edba007ef 330 Gene3D G3DSA:3.40.190.150 31 321 3.1E-66 T 13-10-2018 VAA_02013 9aacbab6738797ba14732c1edba007ef 330 PIRSF PIRSF017082 1 330 1.0E-98 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.509 T 13-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 2.4E-47 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 Gene3D G3DSA:3.20.20.70 1 257 1.7E-100 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 SUPERFAMILY SSF51569 6 245 4.08E-80 T 13-10-2018 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 SMART SM01133 10 244 1.4E-74 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 5.6E-81 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAA_03671 a387de57ad82f9abbadfa6f5a87e578d 258 PIRSF PIRSF001357 5 253 9.2E-75 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VAA_00387 ad52c1c76004318261b10985400cbfc9 175 PIRSF PIRSF025550 1 174 8.0E-81 T 13-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VAA_00387 ad52c1c76004318261b10985400cbfc9 175 Pfam PF02036 SCP-2 sterol transfer family 44 134 7.2E-19 T 13-10-2018 IPR003033 SCP2 sterol-binding domain VAA_00387 ad52c1c76004318261b10985400cbfc9 175 Gene3D G3DSA:3.30.1050.10 7 136 6.2E-6 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VAA_00387 ad52c1c76004318261b10985400cbfc9 175 SUPERFAMILY SSF55718 45 139 1.81E-18 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VAA_01556 056556188feffa4823ce736b580b4dd2 701 Gene3D G3DSA:1.10.10.160 315 430 1.5E-49 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAA_01556 056556188feffa4823ce736b580b4dd2 701 Gene3D G3DSA:3.40.50.300 214 511 1.5E-49 T 13-10-2018 VAA_01556 056556188feffa4823ce736b580b4dd2 701 Pfam PF00580 UvrD/REP helicase N-terminal domain 215 510 1.7E-41 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VAA_01556 056556188feffa4823ce736b580b4dd2 701 SUPERFAMILY SSF52540 212 691 1.07E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01556 056556188feffa4823ce736b580b4dd2 701 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 15 180 1.6E-54 T 13-10-2018 IPR022161 DNA helicase IV, N-terminal domain VAA_01556 056556188feffa4823ce736b580b4dd2 701 Pfam PF13361 UvrD-like helicase C-terminal domain 607 680 4.7E-18 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAA_01556 056556188feffa4823ce736b580b4dd2 701 Gene3D G3DSA:3.40.50.300 519 692 6.7E-29 T 13-10-2018 VAA_01596 2afccda5ebef13992e4533faff5b6914 476 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 310 468 3.4E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_01596 2afccda5ebef13992e4533faff5b6914 476 SUPERFAMILY SSF53850 45 263 1.18E-33 T 13-10-2018 VAA_01596 2afccda5ebef13992e4533faff5b6914 476 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 465 4.9E-33 T 13-10-2018 IPR000160 GGDEF domain VAA_01596 2afccda5ebef13992e4533faff5b6914 476 SMART SM00267 303 469 8.1E-39 T 13-10-2018 IPR000160 GGDEF domain VAA_01596 2afccda5ebef13992e4533faff5b6914 476 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 256 9.5E-24 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01596 2afccda5ebef13992e4533faff5b6914 476 Gene3D G3DSA:3.40.190.10 47 262 1.4E-31 T 13-10-2018 VAA_01596 2afccda5ebef13992e4533faff5b6914 476 Gene3D G3DSA:3.40.190.10 129 225 1.4E-31 T 13-10-2018 VAA_01596 2afccda5ebef13992e4533faff5b6914 476 SUPERFAMILY SSF55073 319 468 5.49E-37 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01596 2afccda5ebef13992e4533faff5b6914 476 SMART SM00062 44 266 9.0E-12 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01596 2afccda5ebef13992e4533faff5b6914 476 Gene3D G3DSA:3.30.70.270 309 474 2.6E-41 T 13-10-2018 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 Gene3D G3DSA:3.30.110.10 34 129 9.7E-39 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 5.3E-14 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 9.4E-37 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 SUPERFAMILY SSF54364 1 36 1.7E-13 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 SUPERFAMILY SSF55200 41 129 6.93E-34 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 Gene3D G3DSA:3.10.20.80 1 33 1.8E-14 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAA_01069 9ba2ef777a87bc511afd55a146f0b9f4 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 2.1E-58 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VAA_03310 39a2dc73aadc1ae5e4b449d72cf0d045 623 Pfam PF07690 Major Facilitator Superfamily 18 310 2.7E-11 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_03310 39a2dc73aadc1ae5e4b449d72cf0d045 623 Pfam PF01553 Acyltransferase 441 566 6.8E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_03310 39a2dc73aadc1ae5e4b449d72cf0d045 623 Gene3D G3DSA:1.20.1250.20 10 420 2.8E-27 T 13-10-2018 VAA_03310 39a2dc73aadc1ae5e4b449d72cf0d045 623 SUPERFAMILY SSF103473 14 419 4.97E-26 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_03310 39a2dc73aadc1ae5e4b449d72cf0d045 623 SUPERFAMILY SSF69593 398 602 1.44E-27 T 13-10-2018 VAA_03310 39a2dc73aadc1ae5e4b449d72cf0d045 623 SMART SM00563 455 569 2.5E-32 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_02955 a10f67f4d571b5eea28645f1dffff1fc 425 Pfam PF13520 Amino acid permease 14 378 1.5E-25 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAA_02955 a10f67f4d571b5eea28645f1dffff1fc 425 Gene3D G3DSA:1.20.1740.10 7 424 8.7E-56 T 13-10-2018 VAA_02955 a10f67f4d571b5eea28645f1dffff1fc 425 PIRSF PIRSF006060 3 421 4.3E-52 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 SUPERFAMILY SSF52540 334 571 2.25E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 Pfam PF00664 ABC transporter transmembrane region 23 287 2.8E-7 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 Gene3D G3DSA:1.20.1560.10 1 321 1.7E-25 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 Pfam PF00005 ABC transporter 356 502 2.9E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 533 1.1E-136 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 Gene3D G3DSA:3.40.50.300 327 572 2.3E-78 T 13-10-2018 VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 SMART SM00382 365 549 1.3E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02234 2bf29eb68cbc6faad679ebd2f28ad5ce 573 SUPERFAMILY SSF90123 7 323 1.96E-36 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02655 3b5c94eadb64aa20c638900c46977ed6 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 7.4E-36 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VAA_02655 3b5c94eadb64aa20c638900c46977ed6 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.0E-28 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 Pfam PF05175 Methyltransferase small domain 43 160 9.0E-18 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 Gene3D G3DSA:3.40.50.150 8 236 1.8E-57 T 13-10-2018 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 142 166 1.6E-6 T 13-10-2018 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 47 61 1.6E-6 T 13-10-2018 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 112 124 1.6E-6 T 13-10-2018 VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 SUPERFAMILY SSF53335 11 171 2.99E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00380 cc0cd29d3843494abe12eeaa8c8e0da5 240 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 10 240 53.461 T 13-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 Pfam PF08402 TOBE domain 267 340 9.3E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 SUPERFAMILY SSF52540 14 250 1.29E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 Pfam PF00005 ABC transporter 30 171 3.9E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 Gene3D G3DSA:3.40.50.300 12 288 9.4E-81 T 13-10-2018 VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 SUPERFAMILY SSF50331 260 344 9.35E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 SMART SM00382 38 221 2.0E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02809 69bf47e927d3ba8b8fc5e1db6312c74e 349 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01762 6090530c48742cb10f4260a03975b960 379 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.328 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VAA_01762 6090530c48742cb10f4260a03975b960 379 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 2.6E-105 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VAA_01762 6090530c48742cb10f4260a03975b960 379 SUPERFAMILY SSF51246 298 371 2.28E-18 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VAA_01762 6090530c48742cb10f4260a03975b960 379 Gene3D G3DSA:3.30.1490.20 107 163 1.0E-16 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_01762 6090530c48742cb10f4260a03975b960 379 SUPERFAMILY SSF56059 92 295 3.54E-54 T 13-10-2018 VAA_01762 6090530c48742cb10f4260a03975b960 379 SUPERFAMILY SSF52440 1 88 4.6E-16 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_01762 6090530c48742cb10f4260a03975b960 379 Gene3D G3DSA:3.40.50.20 1 81 2.1E-19 T 13-10-2018 VAA_01762 6090530c48742cb10f4260a03975b960 379 Gene3D G3DSA:3.30.470.20 164 375 8.5E-72 T 13-10-2018 VAA_01762 6090530c48742cb10f4260a03975b960 379 Pfam PF02222 ATP-grasp domain 101 274 1.5E-48 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.497 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 Gene3D G3DSA:3.40.449.10 25 235 3.8E-234 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 1.8E-209 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 SUPERFAMILY SSF68923 11 228 1.33E-86 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 PIRSF PIRSF006294 4 541 2.8E-225 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 SUPERFAMILY SSF53795 230 541 1.23E-126 T 13-10-2018 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 13-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 Gene3D G3DSA:3.90.228.20 236 526 3.8E-234 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 Gene3D G3DSA:2.170.8.10 49 351 3.8E-234 T 13-10-2018 VAA_00658 e6720a72ee71341e4a76419799b0c72d 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.6E-275 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VAA_03376 16f1a29aa42f07abd0fd45fe93028bd2 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.183 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VAA_03376 16f1a29aa42f07abd0fd45fe93028bd2 161 SUPERFAMILY SSF82093 30 142 5.36E-39 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VAA_03376 16f1a29aa42f07abd0fd45fe93028bd2 161 Gene3D G3DSA:2.40.50.140 30 142 1.6E-40 T 13-10-2018 VAA_03376 16f1a29aa42f07abd0fd45fe93028bd2 161 Pfam PF03100 CcmE 4 136 3.9E-45 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 14 486 1.1E-178 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 SUPERFAMILY SSF53187 16 486 1.07E-59 T 13-10-2018 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 Gene3D G3DSA:3.40.630.10 378 490 1.2E-23 T 13-10-2018 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 Pfam PF07687 Peptidase dimerisation domain 213 295 8.8E-9 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 Gene3D G3DSA:3.40.630.10 5 248 1.2E-62 T 13-10-2018 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PIRSF PIRSF016599 5 489 1.3E-212 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 Pfam PF01546 Peptidase family M20/M25/M40 77 472 2.7E-21 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_03599 c6721ef479e3552e11b9e86017efa8bf 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.9E-88 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VAA_02552 dcc9f3e705b75eda7aa88f2f69c220f5 567 Gene3D G3DSA:1.20.1730.10 5 329 5.4E-37 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VAA_02552 dcc9f3e705b75eda7aa88f2f69c220f5 567 Gene3D G3DSA:1.20.1730.10 346 557 3.3E-29 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VAA_02552 dcc9f3e705b75eda7aa88f2f69c220f5 567 Pfam PF00474 Sodium:solute symporter family 33 298 2.2E-33 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAA_02552 dcc9f3e705b75eda7aa88f2f69c220f5 567 Pfam PF00474 Sodium:solute symporter family 368 489 2.0E-19 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAA_02552 dcc9f3e705b75eda7aa88f2f69c220f5 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 6.6E-262 T 13-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VAA_02552 dcc9f3e705b75eda7aa88f2f69c220f5 567 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 471 491 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site VAA_02427 1c9af3254e9c6b55fe117658998d7ed2 91 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 91 50.648 T 13-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria VAA_02427 1c9af3254e9c6b55fe117658998d7ed2 91 Pfam PF03350 Uncharacterized protein family, UPF0114 1 54 2.9E-15 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 VAA_02463 a3407ebd8c5bd78f9ece056412ca3100 356 Gene3D G3DSA:3.40.50.2000 4 156 5.4E-25 T 13-10-2018 VAA_02463 a3407ebd8c5bd78f9ece056412ca3100 356 Gene3D G3DSA:3.40.50.2000 161 347 3.3E-38 T 13-10-2018 VAA_02463 a3407ebd8c5bd78f9ece056412ca3100 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 306 5.9E-52 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VAA_02463 a3407ebd8c5bd78f9ece056412ca3100 356 SUPERFAMILY SSF53756 9 345 4.39E-81 T 13-10-2018 VAA_02091 242711746d6ebe57e2e4787b5325b6e2 441 Pfam PF13726 Na+-H+ antiporter family 2 88 4.1E-35 T 13-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VAA_02091 242711746d6ebe57e2e4787b5325b6e2 441 Pfam PF03553 Na+/H+ antiporter family 150 435 5.4E-74 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAA_02091 242711746d6ebe57e2e4787b5325b6e2 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 13-10-2018 VAA_02091 242711746d6ebe57e2e4787b5325b6e2 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 13-10-2018 VAA_03008 3d7aa1b3ff3c38aaf4975ae3fb8f4aa6 473 Gene3D G3DSA:3.30.70.1230 112 300 5.4E-21 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03008 3d7aa1b3ff3c38aaf4975ae3fb8f4aa6 473 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 114 268 1.2E-5 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 VAA_03008 3d7aa1b3ff3c38aaf4975ae3fb8f4aa6 473 SUPERFAMILY SSF55073 113 276 7.85E-23 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 128 388 1.1E-32 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Gene3D G3DSA:2.40.50.100 126 169 4.1E-6 T 13-10-2018 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Gene3D G3DSA:2.40.420.20 321 410 1.7E-22 T 13-10-2018 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Gene3D G3DSA:2.40.50.320 411 482 7.0E-13 T 13-10-2018 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 107 315 7.2E-74 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 SUPERFAMILY SSF111369 129 320 4.71E-15 T 13-10-2018 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Gene3D G3DSA:2.40.30.170 243 316 1.1E-24 T 13-10-2018 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Gene3D G3DSA:2.40.50.100 193 242 1.1E-24 T 13-10-2018 VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Pfam PF11604 Copper binding periplasmic protein CusF 414 479 2.3E-15 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF VAA_02964 05b5fb511d9ac5fdf78c89d85175f0b8 500 Gene3D G3DSA:1.10.287.470 183 192 1.1E-24 T 13-10-2018 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 Gene3D G3DSA:3.40.50.920 470 596 1.1E-45 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 SUPERFAMILY SSF52922 464 596 1.31E-44 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 1 265 9.0E-128 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 SMART SM00861 286 457 1.9E-67 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 Gene3D G3DSA:3.40.50.970 258 469 5.2E-85 T 13-10-2018 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 TIGRFAM TIGR00232 tktlase_bact: transketolase 1 595 1.7E-274 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 SUPERFAMILY SSF52518 1 261 1.74E-92 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 Pfam PF02780 Transketolase, C-terminal domain 476 587 2.3E-20 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 Pfam PF02779 Transketolase, pyrimidine binding domain 286 456 5.5E-48 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 Gene3D G3DSA:3.40.50.970 1 257 2.7E-99 T 13-10-2018 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 ProSitePatterns PS00802 Transketolase signature 2. 399 415 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_01618 bd1d9178b77c293bc64d9dbb45176628 596 SUPERFAMILY SSF52518 266 458 1.23E-68 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_03615 1b7db56ebd5b241a2a30dab6446bf0c8 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.518 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VAA_03615 1b7db56ebd5b241a2a30dab6446bf0c8 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 1.5E-107 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VAA_03615 1b7db56ebd5b241a2a30dab6446bf0c8 414 PIRSF PIRSF016055 1 414 3.8E-200 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VAA_03615 1b7db56ebd5b241a2a30dab6446bf0c8 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.5E-202 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VAA_01425 737c28221e438386b00a1eed215b9cb6 1250 Pfam PF10462 Peptidase M66 357 662 1.3E-92 T 13-10-2018 IPR019503 Peptidase M66 domain GO:0004222 VAA_01425 737c28221e438386b00a1eed215b9cb6 1250 Pfam PF12561 ToxR activated gene A lipoprotein 728 861 8.6E-63 T 13-10-2018 IPR022218 ToxR activated gene A lipoprotein VAA_01425 737c28221e438386b00a1eed215b9cb6 1250 Gene3D G3DSA:3.30.160.280 1189 1250 4.5E-12 T 13-10-2018 VAA_01425 737c28221e438386b00a1eed215b9cb6 1250 Gene3D G3DSA:3.30.160.280 1015 1082 1.1E-13 T 13-10-2018 VAA_03614 d714346381540e51c6ed0f0181acf187 255 SMART SM00900 142 240 1.2E-33 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAA_03614 d714346381540e51c6ed0f0181acf187 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 252 35.771 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VAA_03614 d714346381540e51c6ed0f0181acf187 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 248 1.8E-94 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VAA_03614 d714346381540e51c6ed0f0181acf187 255 Pfam PF04205 FMN-binding domain 142 237 1.3E-15 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAA_03614 d714346381540e51c6ed0f0181acf187 255 PIRSF PIRSF009437 1 255 3.7E-105 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VAA_01660 12c97fec2f1321a5c8cf293d1453aae6 101 SMART SM01152 13 89 1.0E-38 T 13-10-2018 IPR003746 Protein of unknown function DUF167 VAA_01660 12c97fec2f1321a5c8cf293d1453aae6 101 Gene3D G3DSA:3.30.1200.10 3 101 2.1E-34 T 13-10-2018 IPR036591 YggU-like superfamily VAA_01660 12c97fec2f1321a5c8cf293d1453aae6 101 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 17 87 7.2E-26 T 13-10-2018 IPR003746 Protein of unknown function DUF167 VAA_01660 12c97fec2f1321a5c8cf293d1453aae6 101 Hamap MF_00634 UPF0235 protein YggU [yggU]. 13 99 20.187 T 13-10-2018 IPR003746 Protein of unknown function DUF167 VAA_01660 12c97fec2f1321a5c8cf293d1453aae6 101 SUPERFAMILY SSF69786 6 100 6.54E-32 T 13-10-2018 IPR036591 YggU-like superfamily VAA_01660 12c97fec2f1321a5c8cf293d1453aae6 101 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 13 94 8.7E-27 T 13-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 SUPERFAMILY SSF54292 4 105 1.57E-32 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 13-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 Gene3D G3DSA:3.10.20.30 1 112 3.9E-36 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.6E-14 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.7E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.7E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.7E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VAA_00514 2a54925aa5f667ad11df6a41b54cb7ea 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.3E-59 T 13-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 SMART SM00479 8 201 0.0026 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 Gene3D G3DSA:1.20.1280.70 358 419 5.6E-27 T 13-10-2018 VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 PIRSF PIRSF000977 1 474 1.9E-195 T 13-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 Pfam PF00929 Exonuclease 11 191 2.0E-24 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 Gene3D G3DSA:2.30.30.450 212 351 4.4E-52 T 13-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 Gene3D G3DSA:3.30.420.10 2 199 2.5E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 Pfam PF08411 Exonuclease C-terminal 210 470 1.9E-100 T 13-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VAA_03096 29c3babb1b8fe97569ba0ab989a31385 474 SUPERFAMILY SSF53098 6 472 1.93E-136 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_02278 16ec8f962ac461c0373cd982e160387d 961 Pfam PF01580 FtsK/SpoIIIE family 576 789 2.1E-71 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VAA_02278 16ec8f962ac461c0373cd982e160387d 961 Pfam PF09397 Ftsk gamma domain 895 954 6.9E-26 T 13-10-2018 IPR018541 FtsK gamma domain VAA_02278 16ec8f962ac461c0373cd982e160387d 961 Gene3D G3DSA:1.10.10.10 887 954 1.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02278 16ec8f962ac461c0373cd982e160387d 961 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 1.5E-41 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region VAA_02278 16ec8f962ac461c0373cd982e160387d 961 SUPERFAMILY SSF46785 893 957 3.67E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02278 16ec8f962ac461c0373cd982e160387d 961 SMART SM00843 893 958 2.1E-38 T 13-10-2018 IPR018541 FtsK gamma domain VAA_02278 16ec8f962ac461c0373cd982e160387d 961 SUPERFAMILY SSF52540 550 862 9.29E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02278 16ec8f962ac461c0373cd982e160387d 961 Gene3D G3DSA:3.40.50.300 573 875 2.5E-120 T 13-10-2018 VAA_02278 16ec8f962ac461c0373cd982e160387d 961 Gene3D G3DSA:3.30.980.40 468 572 5.5E-33 T 13-10-2018 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 SUPERFAMILY SSF74653 118 196 3.66E-25 T 13-10-2018 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 2.0E-16 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.0E-16 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.0E-16 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.0E-16 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 1.3E-20 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 6.8E-20 T 13-10-2018 IPR006260 TonB/TolA, C-terminal VAA_01803 eb82a6d9c04a74b141ce372fa1b1bf0f 206 Gene3D G3DSA:3.30.1150.10 103 206 5.2E-31 T 13-10-2018 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 Pfam PF00005 ABC transporter 22 191 8.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 Pfam PF00005 ABC transporter 340 473 4.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 Pfam PF12848 ABC transporter 230 306 1.7E-13 T 13-10-2018 IPR032781 ABC-transporter extension domain VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 SUPERFAMILY SSF52540 302 530 2.48E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 Gene3D G3DSA:3.40.50.300 1 285 5.0E-85 T 13-10-2018 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.4E-290 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 SUPERFAMILY SSF52540 9 243 4.57E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 Gene3D G3DSA:3.40.50.300 286 555 2.2E-77 T 13-10-2018 VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 SMART SM00382 348 522 1.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00427 71c9f6c76b9f83184adb6397c058c3fd 555 SMART SM00382 31 236 2.6E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 SMART SM00418 22 100 4.0E-29 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 Pfam PF01022 Bacterial regulatory protein, arsR family 30 74 6.0E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 54 1.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 1.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 SUPERFAMILY SSF46785 9 103 2.64E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00407 fca7c01cdae80dfda27c1ab94a8ad4a2 104 Gene3D G3DSA:1.10.10.10 8 104 7.2E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02754 fb818261b623fd94b00ccaf8de76c5da 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 408 2.8E-122 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VAA_02754 fb818261b623fd94b00ccaf8de76c5da 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 1.3E-182 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_02754 fb818261b623fd94b00ccaf8de76c5da 422 SUPERFAMILY SSF55205 7 418 1.14E-141 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VAA_02754 fb818261b623fd94b00ccaf8de76c5da 422 Gene3D G3DSA:3.65.10.10 14 415 1.0E-169 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAA_02754 fb818261b623fd94b00ccaf8de76c5da 422 Gene3D G3DSA:3.65.10.10 23 231 1.0E-169 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VAA_02754 fb818261b623fd94b00ccaf8de76c5da 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 418 43.591 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00726 e41e1e766bf16fc56f431671e9260a51 246 Pfam PF07072 Cell division protein 18 224 2.5E-75 T 13-10-2018 IPR009777 Cell division protein ZapD VAA_00726 e41e1e766bf16fc56f431671e9260a51 246 Gene3D G3DSA:1.10.3900.10 12 178 1.0E-82 T 13-10-2018 VAA_00726 e41e1e766bf16fc56f431671e9260a51 246 SUPERFAMILY SSF160950 1 245 1.44E-91 T 13-10-2018 IPR036268 ZapD domain superfamily VAA_00726 e41e1e766bf16fc56f431671e9260a51 246 Gene3D G3DSA:2.60.440.10 6 245 1.0E-82 T 13-10-2018 IPR027462 Z ring-associated protein D, C-terminal VAA_00726 e41e1e766bf16fc56f431671e9260a51 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.7 T 13-10-2018 IPR009777 Cell division protein ZapD VAA_00795 e190e9fa0e10f244efd645456abb424f 157 SUPERFAMILY SSF54534 81 156 1.31E-22 T 13-10-2018 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 5.1E-24 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 SUPERFAMILY SSF46557 2 75 9.29E-25 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 7.9E-51 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.1E-25 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 PIRSF PIRSF006092 1 157 2.4E-44 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.068 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 Gene3D G3DSA:1.10.287.180 1 74 1.9E-24 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VAA_00795 e190e9fa0e10f244efd645456abb424f 157 Gene3D G3DSA:3.10.50.30 75 157 3.3E-29 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 8.0E-93 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 7.2E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 7.2E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 7.2E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 Gene3D G3DSA:3.40.710.10 27 282 2.8E-91 T 13-10-2018 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 1.3E-26 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 Gene3D G3DSA:2.60.410.10 283 373 4.4E-31 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 SUPERFAMILY SSF69189 283 375 1.04E-27 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 SMART SM00936 283 373 1.6E-37 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_01101 d7e08bd36310cb01ddd397d2add37651 392 SUPERFAMILY SSF56601 13 283 5.64E-85 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_02324 00cf7a80a293ba53ed7e6c2aea653c54 322 SUPERFAMILY SSF53955 8 321 2.01E-101 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_02324 00cf7a80a293ba53ed7e6c2aea653c54 322 Gene3D G3DSA:1.10.8.350 33 199 2.3E-92 T 13-10-2018 VAA_02324 00cf7a80a293ba53ed7e6c2aea653c54 322 Pfam PF13406 Transglycosylase SLT domain 23 318 1.1E-109 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 VAA_02324 00cf7a80a293ba53ed7e6c2aea653c54 322 Gene3D G3DSA:1.10.530.10 66 317 2.3E-92 T 13-10-2018 VAA_02324 00cf7a80a293ba53ed7e6c2aea653c54 322 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 321 1.1E-109 T 13-10-2018 IPR011970 Lytic murein transglycosylase VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 SUPERFAMILY SSF57825 101 151 6.93E-16 T 13-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 SUPERFAMILY SSF54893 2 100 1.24E-35 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 6.4E-19 T 13-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.35 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 Gene3D G3DSA:3.30.70.140 1 100 2.8E-36 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 3.7E-30 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 5.0E-43 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 Gene3D G3DSA:2.30.30.20 101 153 2.8E-24 T 13-10-2018 VAA_02759 2999b6ca3fe611f1de42c06bc5ba63b7 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.4E-60 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VAA_00984 311b3f3615775409ccee987caa576334 393 SUPERFAMILY SSF53335 130 356 1.07E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00984 311b3f3615775409ccee987caa576334 393 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.9E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_00984 311b3f3615775409ccee987caa576334 393 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.9E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_00984 311b3f3615775409ccee987caa576334 393 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.9E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_00984 311b3f3615775409ccee987caa576334 393 Gene3D G3DSA:1.10.1660.10 1 105 5.8E-22 T 13-10-2018 VAA_00984 311b3f3615775409ccee987caa576334 393 Pfam PF13649 Methyltransferase domain 188 282 5.2E-17 T 13-10-2018 VAA_00984 311b3f3615775409ccee987caa576334 393 Pfam PF13411 MerR HTH family regulatory protein 2 69 1.8E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_00984 311b3f3615775409ccee987caa576334 393 SMART SM00422 2 70 7.9E-21 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_00984 311b3f3615775409ccee987caa576334 393 SUPERFAMILY SSF46955 2 103 2.05E-21 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_00984 311b3f3615775409ccee987caa576334 393 Gene3D G3DSA:3.40.50.150 142 392 1.1E-53 T 13-10-2018 VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 Pfam PF03023 MviN-like protein 36 489 1.7E-145 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 11 517 1.8E-141 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 41 60 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 372 391 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 274 300 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 424 441 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 60 76 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 172 193 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PRINTS PR01806 Virulence factor MviN signature 148 172 1.9E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 PIRSF PIRSF002869 7 524 1.6E-151 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_00409 83af2d7c86b8312bc3acc76c1a9b1ce4 526 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 11 482 19.757 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VAA_03229 cf3b8c48b69f6ad3f405affa2fa8ad76 387 Gene3D G3DSA:3.40.640.10 63 287 1.9E-115 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_03229 cf3b8c48b69f6ad3f405affa2fa8ad76 387 Gene3D G3DSA:3.90.1150.10 46 376 1.9E-115 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_03229 cf3b8c48b69f6ad3f405affa2fa8ad76 387 Pfam PF00155 Aminotransferase class I and II 46 378 1.4E-44 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_03229 cf3b8c48b69f6ad3f405affa2fa8ad76 387 SUPERFAMILY SSF53383 9 386 3.7E-90 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_03229 cf3b8c48b69f6ad3f405affa2fa8ad76 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 236 245 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VAA_03229 cf3b8c48b69f6ad3f405affa2fa8ad76 387 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 26 381 4.2E-133 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 2.4E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 3.2E-26 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 3.2E-26 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 3.2E-26 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 5.3E-73 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00839 93fd5b5cc22773116a027239628cac95 540 Pfam PF14849 YidC periplasmic domain 65 339 3.7E-82 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VAA_00839 93fd5b5cc22773116a027239628cac95 540 Pfam PF02096 60Kd inner membrane protein 351 530 2.2E-63 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VAA_00839 93fd5b5cc22773116a027239628cac95 540 Gene3D G3DSA:2.70.98.90 61 330 6.1E-88 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily VAA_00839 93fd5b5cc22773116a027239628cac95 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 348 2.6E-110 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal VAA_00839 93fd5b5cc22773116a027239628cac95 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.817 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VAA_02477 fb5b3b46e5c41b2e7f5ebb1a403440ee 292 Pfam PF00483 Nucleotidyl transferase 2 238 1.1E-73 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAA_02477 fb5b3b46e5c41b2e7f5ebb1a403440ee 292 Gene3D G3DSA:3.90.550.10 1 292 1.1E-88 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02477 fb5b3b46e5c41b2e7f5ebb1a403440ee 292 SUPERFAMILY SSF53448 1 285 3.9E-94 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02477 fb5b3b46e5c41b2e7f5ebb1a403440ee 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 4.5E-160 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VAA_01808 3b3058feace43fe2ada2aa9b5ea8f890 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 4.1E-21 T 13-10-2018 IPR025990 Cysteine-rich CPXCG protein VAA_01808 3b3058feace43fe2ada2aa9b5ea8f890 67 PIRSF PIRSF037225 1 65 1.2E-24 T 13-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 Pfam PF03924 CHASE domain 114 226 9.8E-16 T 13-10-2018 IPR006189 CHASE domain VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 297 455 2.6E-43 T 13-10-2018 IPR000160 GGDEF domain VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 SMART SM00267 287 458 9.7E-44 T 13-10-2018 IPR000160 GGDEF domain VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 Pfam PF00990 Diguanylate cyclase, GGDEF domain 299 456 1.3E-41 T 13-10-2018 IPR000160 GGDEF domain VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 SUPERFAMILY SSF55073 304 455 1.73E-41 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 Gene3D G3DSA:3.30.70.270 297 458 8.3E-49 T 13-10-2018 VAA_01261 07e4c58cb9787b5705dd02a619f93eca 458 SMART SM01079 52 228 1.3E-43 T 13-10-2018 IPR006189 CHASE domain VAA_03514 28840459fc477c7798b41385d59a90f4 307 SMART SM00047 146 304 6.2E-48 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VAA_03514 28840459fc477c7798b41385d59a90f4 307 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 167 303 8.3E-20 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VAA_03514 28840459fc477c7798b41385d59a90f4 307 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 303 3.2E-105 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VAA_03514 28840459fc477c7798b41385d59a90f4 307 Pfam PF10135 Rod binding protein 53 102 2.3E-15 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VAA_03514 28840459fc477c7798b41385d59a90f4 307 Gene3D G3DSA:1.10.530.10 161 299 8.2E-43 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 Gene3D G3DSA:2.10.70.40 195 246 8.2E-43 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 221 242 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 156 179 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 286 304 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 180 198 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 PRINTS PR01002 Flagellar protein FlgJ signature 243 264 1.7E-30 T 13-10-2018 VAA_03514 28840459fc477c7798b41385d59a90f4 307 SUPERFAMILY SSF53955 127 198 7.31E-5 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 Gene3D G3DSA:3.20.20.70 1 244 4.6E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 10 312 53.297 T 13-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 PIRSF PIRSF006621 1 319 7.2E-75 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 Gene3D G3DSA:1.20.225.30 245 316 2.2E-27 T 13-10-2018 VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 Pfam PF01207 Dihydrouridine synthase (Dus) 7 298 3.9E-79 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_03237 c001cc948828936c7d541feb42d0c3a9 320 SUPERFAMILY SSF51395 3 315 6.04E-74 T 13-10-2018 VAA_00744 e503693aa0a93a5cb10a7f4d01ac383f 189 Pfam PF00156 Phosphoribosyl transferase domain 28 172 9.6E-27 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAA_00744 e503693aa0a93a5cb10a7f4d01ac383f 189 SUPERFAMILY SSF53271 14 188 9.83E-56 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_00744 e503693aa0a93a5cb10a7f4d01ac383f 189 Gene3D G3DSA:3.40.50.2020 5 189 1.2E-65 T 13-10-2018 VAA_00744 e503693aa0a93a5cb10a7f4d01ac383f 189 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 20 185 1.1E-72 T 13-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VAA_00770 2242c454b2ea15900e36c12c428a326d 342 Pfam PF08402 TOBE domain 276 342 3.0E-7 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAA_00770 2242c454b2ea15900e36c12c428a326d 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00770 2242c454b2ea15900e36c12c428a326d 342 Pfam PF00005 ABC transporter 20 164 2.3E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00770 2242c454b2ea15900e36c12c428a326d 342 Gene3D G3DSA:3.40.50.300 1 240 2.1E-75 T 13-10-2018 VAA_00770 2242c454b2ea15900e36c12c428a326d 342 SUPERFAMILY SSF52540 5 242 3.55E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00770 2242c454b2ea15900e36c12c428a326d 342 SUPERFAMILY SSF50331 263 342 1.53E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_00770 2242c454b2ea15900e36c12c428a326d 342 SMART SM00382 29 214 8.3E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01029 c03fe23487fac46983e0e23d4513bafe 331 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 331 6.6E-170 T 13-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 VAA_01029 c03fe23487fac46983e0e23d4513bafe 331 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 238 330 1.7E-44 T 13-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 VAA_01029 c03fe23487fac46983e0e23d4513bafe 331 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 183 6.4E-74 T 13-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 VAA_03428 03ee7567d4cf2d9b1324cf2d2581165e 184 SUPERFAMILY SSF54637 23 168 3.73E-23 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03428 03ee7567d4cf2d9b1324cf2d2581165e 184 Gene3D G3DSA:3.10.129.10 25 169 3.9E-26 T 13-10-2018 VAA_03428 03ee7567d4cf2d9b1324cf2d2581165e 184 Pfam PF14539 Domain of unknown function (DUF4442) 26 163 7.7E-26 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 SUPERFAMILY SSF53850 44 278 3.12E-35 T 13-10-2018 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 Pfam PF01464 Transglycosylase SLT domain 309 413 3.4E-21 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 SUPERFAMILY SSF53955 257 460 2.89E-37 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 480 48.536 T 13-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 SMART SM00062 43 279 6.5E-27 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 1.1E-30 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 Gene3D G3DSA:3.40.190.10 38 274 5.5E-70 T 13-10-2018 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 Gene3D G3DSA:3.40.190.10 128 235 5.5E-70 T 13-10-2018 VAA_01183 fb193e9520783be979c2ec577d98b7f0 512 Gene3D G3DSA:1.10.530.10 298 477 3.1E-34 T 13-10-2018 VAA_03465 d37fbb59568e3fc1d632fd1de82907a1 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 5.3E-20 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VAA_03465 d37fbb59568e3fc1d632fd1de82907a1 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 430 655 7.8E-53 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VAA_03465 d37fbb59568e3fc1d632fd1de82907a1 666 Pfam PF07196 Flagellin hook IN motif 125 177 2.3E-8 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 SUPERFAMILY SSF56176 8 201 1.24E-39 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 1.6E-91 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 Pfam PF01565 FAD binding domain 24 142 1.3E-19 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 2.9E-31 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 348 79.955 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 Gene3D G3DSA:3.30.465.10 73 222 2.1E-51 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 Gene3D G3DSA:3.90.78.10 223 347 1.8E-42 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 SUPERFAMILY SSF56194 207 341 6.28E-46 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VAA_00049 eeb8867eeee5ff6e143bc4c8f0e68c0c 348 Gene3D G3DSA:3.30.43.10 1 72 9.9E-21 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VAA_03575 b7fd97bf0aa20a59f5a71a0326543ac1 243 Gene3D G3DSA:3.40.1160.10 3 242 4.2E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03575 b7fd97bf0aa20a59f5a71a0326543ac1 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 5.3E-102 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VAA_03575 b7fd97bf0aa20a59f5a71a0326543ac1 243 SUPERFAMILY SSF53633 7 240 5.76E-71 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03575 b7fd97bf0aa20a59f5a71a0326543ac1 243 PIRSF PIRSF005650 4 243 8.0E-89 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VAA_03575 b7fd97bf0aa20a59f5a71a0326543ac1 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.709 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VAA_03575 b7fd97bf0aa20a59f5a71a0326543ac1 243 Pfam PF00696 Amino acid kinase family 11 219 4.6E-26 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 Pfam PF00005 ABC transporter 38 189 1.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 SUPERFAMILY SSF52540 8 261 4.36E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 SMART SM00382 46 239 3.6E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 9.0E-28 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 3.8E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03245 1ba3743b4657dcee18c27a3ff8fc290d 330 Gene3D G3DSA:3.40.50.300 6 330 1.2E-98 T 13-10-2018 VAA_03377 b490cb77e41f3aeb1b34f324d43629f7 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 2.5E-14 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VAA_03377 b490cb77e41f3aeb1b34f324d43629f7 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 2.1E-16 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VAA_00275 7a439abebc2f1947791296b8345ff7f2 455 SUPERFAMILY SSF56349 113 406 2.35E-44 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00275 7a439abebc2f1947791296b8345ff7f2 455 Gene3D G3DSA:1.10.150.130 111 197 1.4E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00275 7a439abebc2f1947791296b8345ff7f2 455 Pfam PF00589 Phage integrase family 241 373 4.8E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_00275 7a439abebc2f1947791296b8345ff7f2 455 Gene3D G3DSA:1.10.443.10 230 409 5.2E-17 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00275 7a439abebc2f1947791296b8345ff7f2 455 Gene3D G3DSA:3.30.160.390 1 110 1.7E-11 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAA_00275 7a439abebc2f1947791296b8345ff7f2 455 Pfam PF13356 Arm DNA-binding domain 2 93 9.8E-11 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 Gene3D G3DSA:3.10.350.10 47 93 6.8E-12 T 13-10-2018 IPR036779 LysM domain superfamily VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 SMART SM00257 49 93 1.8E-10 T 13-10-2018 IPR018392 LysM domain VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 Gene3D G3DSA:2.70.70.10 134 312 8.0E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 SUPERFAMILY SSF54106 49 93 8.5E-10 T 13-10-2018 VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 Pfam PF01551 Peptidase family M23 213 307 1.5E-31 T 13-10-2018 IPR016047 Peptidase M23 VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 Pfam PF01476 LysM domain 50 92 6.5E-11 T 13-10-2018 IPR018392 LysM domain VAA_00695 7204d32b024e03135e4bfd9245f35c25 312 SUPERFAMILY SSF51261 167 311 6.8E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_01726 0968c49ce789d7421c909a432ccced01 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.8E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01726 0968c49ce789d7421c909a432ccced01 157 SUPERFAMILY SSF54523 7 135 3.14E-14 T 13-10-2018 VAA_01726 0968c49ce789d7421c909a432ccced01 157 Gene3D G3DSA:3.30.700.10 7 157 1.4E-15 T 13-10-2018 VAA_01726 0968c49ce789d7421c909a432ccced01 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 6.1E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_03015 297c94a19152e20debfeabfa46d65e35 262 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 93 4.8E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03015 297c94a19152e20debfeabfa46d65e35 262 SMART SM00862 18 93 1.0E-11 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03015 297c94a19152e20debfeabfa46d65e35 262 SUPERFAMILY SSF46894 16 93 9.07E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03015 297c94a19152e20debfeabfa46d65e35 262 Gene3D G3DSA:1.10.10.10 1 94 9.7E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00449 22dd3c565ebbafd16f4cadddcce13332 224 SMART SM00382 27 215 5.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00449 22dd3c565ebbafd16f4cadddcce13332 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.7E-90 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VAA_00449 22dd3c565ebbafd16f4cadddcce13332 224 Gene3D G3DSA:3.40.50.300 1 223 1.1E-61 T 13-10-2018 VAA_00449 22dd3c565ebbafd16f4cadddcce13332 224 SUPERFAMILY SSF52540 1 220 6.28E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00449 22dd3c565ebbafd16f4cadddcce13332 224 Pfam PF00005 ABC transporter 18 165 3.0E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00449 22dd3c565ebbafd16f4cadddcce13332 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_04307 342c00fe6b2f94824dba65f4bccf17eb 155 Pfam PF03061 Thioesterase superfamily 57 133 3.3E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAA_04307 342c00fe6b2f94824dba65f4bccf17eb 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 141 5.3E-36 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VAA_04307 342c00fe6b2f94824dba65f4bccf17eb 155 Gene3D G3DSA:3.10.129.10 6 149 8.8E-54 T 13-10-2018 VAA_04307 342c00fe6b2f94824dba65f4bccf17eb 155 SUPERFAMILY SSF54637 11 140 2.71E-26 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_00840 f6fdd60d6800fe4d6d0c757c265930f1 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 1.0E-23 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VAA_00840 f6fdd60d6800fe4d6d0c757c265930f1 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 83 6.5E-32 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VAA_00840 f6fdd60d6800fe4d6d0c757c265930f1 86 Pfam PF01809 Haemolytic domain 11 75 1.2E-28 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VAA_00840 f6fdd60d6800fe4d6d0c757c265930f1 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.533 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VAA_00840 f6fdd60d6800fe4d6d0c757c265930f1 86 SMART SM01234 8 75 4.8E-42 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VAA_02933 795a450b043f09bc4fc2b12d356fe3cc 303 Pfam PF14502 Helix-turn-helix domain 30 76 5.5E-17 T 13-10-2018 VAA_02933 795a450b043f09bc4fc2b12d356fe3cc 303 SUPERFAMILY SSF53850 79 303 7.06E-72 T 13-10-2018 VAA_02933 795a450b043f09bc4fc2b12d356fe3cc 303 Gene3D G3DSA:3.40.190.10 96 303 3.7E-63 T 13-10-2018 VAA_02933 795a450b043f09bc4fc2b12d356fe3cc 303 Pfam PF14503 YhfZ C-terminal domain 80 303 3.8E-81 T 13-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain VAA_02933 795a450b043f09bc4fc2b12d356fe3cc 303 Gene3D G3DSA:1.10.10.10 21 83 4.4E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02933 795a450b043f09bc4fc2b12d356fe3cc 303 Gene3D G3DSA:3.40.190.10 170 260 3.7E-63 T 13-10-2018 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SUPERFAMILY SSF48452 119 260 1.21E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 Pfam PF13181 Tetratricopeptide repeat 371 396 0.049 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 Pfam PF13374 Tetratricopeptide repeat 287 318 0.0023 T 13-10-2018 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SUPERFAMILY SSF48452 271 406 3.16E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SMART SM00028 285 318 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SMART SM00028 203 236 180.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SMART SM00028 123 156 490.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SMART SM00028 325 358 410.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 SMART SM00028 163 196 0.019 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 Gene3D G3DSA:1.25.40.10 105 275 9.3E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01885 36c22d575e66223b6a253633cfab2872 444 Gene3D G3DSA:1.25.40.10 276 444 1.5E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02410 0d9049eacadb29d4b41bb103692d9a7d 279 SUPERFAMILY SSF53335 9 273 1.54E-95 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02410 0d9049eacadb29d4b41bb103692d9a7d 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.0E-113 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VAA_02410 0d9049eacadb29d4b41bb103692d9a7d 279 Gene3D G3DSA:3.40.50.150 1 279 8.6E-116 T 13-10-2018 VAA_02410 0d9049eacadb29d4b41bb103692d9a7d 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.928 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VAA_03503 88366e6a5d495c04324d69102329f342 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 SUPERFAMILY SSF51735 161 313 7.56E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03503 88366e6a5d495c04324d69102329f342 419 Gene3D G3DSA:3.40.50.720 159 311 3.2E-43 T 13-10-2018 VAA_03503 88366e6a5d495c04324d69102329f342 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 3.9E-146 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 412 1.1E-21 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 Gene3D G3DSA:3.30.460.30 1 156 7.7E-60 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.835 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.5E-49 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VAA_03503 88366e6a5d495c04324d69102329f342 419 SUPERFAMILY SSF69075 315 416 7.06E-27 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 9.8E-53 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 SUPERFAMILY SSF69742 1 156 1.44E-49 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_03503 88366e6a5d495c04324d69102329f342 419 PIRSF PIRSF000445 1 419 1.6E-156 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Gene3D G3DSA:1.10.730.10 592 833 1.0E-70 T 13-10-2018 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 SUPERFAMILY SSF46589 900 964 6.8E-17 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 SUPERFAMILY SSF50677 205 378 1.7E-57 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 SUPERFAMILY SSF52374 14 655 2.33E-135 T 13-10-2018 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Pfam PF08264 Anticodon-binding domain of tRNA 689 841 3.1E-40 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 960 5.1E-18 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 SUPERFAMILY SSF47323 656 914 1.21E-68 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Gene3D G3DSA:3.40.50.620 372 591 8.4E-58 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Gene3D G3DSA:3.40.50.620 13 210 1.3E-55 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 7.5E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 7.5E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 7.5E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 7.5E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 7.5E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 3.5E-224 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 TIGRFAM TIGR00422 valS: valine--tRNA ligase 15 947 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Gene3D G3DSA:3.90.740.10 211 371 6.6E-48 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Gene3D G3DSA:1.10.287.380 893 965 9.5E-19 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02770 0d54c6fc079ebbcb23693c06ee8821cf 967 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 965 15.965 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VAA_02939 de9aa7588264be0c406840924d534b1b 302 Gene3D G3DSA:3.20.20.100 1 302 4.1E-102 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAA_02939 de9aa7588264be0c406840924d534b1b 302 Pfam PF00248 Aldo/keto reductase family 16 291 3.0E-62 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain VAA_02939 de9aa7588264be0c406840924d534b1b 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 4.3E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_02939 de9aa7588264be0c406840924d534b1b 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 4.3E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VAA_02939 de9aa7588264be0c406840924d534b1b 302 SUPERFAMILY SSF51430 7 294 2.36E-71 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VAA_01638 b8b80f8a951d9498fafdf564bb7a40f2 512 Gene3D G3DSA:1.20.1250.20 25 493 8.0E-60 T 13-10-2018 VAA_01638 b8b80f8a951d9498fafdf564bb7a40f2 512 SUPERFAMILY SSF103473 25 494 7.85E-19 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01638 b8b80f8a951d9498fafdf564bb7a40f2 512 Pfam PF07690 Major Facilitator Superfamily 28 441 8.0E-9 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_00401 c8585fe04ac6a82bd8a20c7c717e68d7 290 Pfam PF13276 HTH-like domain 42 95 4.5E-8 T 13-10-2018 IPR025948 HTH-like domain VAA_00401 c8585fe04ac6a82bd8a20c7c717e68d7 290 Pfam PF00665 Integrase core domain 119 234 1.6E-32 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_00401 c8585fe04ac6a82bd8a20c7c717e68d7 290 Gene3D G3DSA:3.30.420.10 109 281 1.5E-16 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00401 c8585fe04ac6a82bd8a20c7c717e68d7 290 SUPERFAMILY SSF53098 113 274 1.2E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_01135 a3554a96415b82656b04dad1806ab773 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 256 1.5E-31 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_01135 a3554a96415b82656b04dad1806ab773 350 Gene3D G3DSA:2.40.420.20 267 335 1.1E-70 T 13-10-2018 VAA_01135 a3554a96415b82656b04dad1806ab773 350 Gene3D G3DSA:2.40.50.100 56 184 1.1E-70 T 13-10-2018 VAA_01135 a3554a96415b82656b04dad1806ab773 350 Gene3D G3DSA:1.10.287.470 91 150 1.1E-70 T 13-10-2018 VAA_01135 a3554a96415b82656b04dad1806ab773 350 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 337 1.2E-87 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_01135 a3554a96415b82656b04dad1806ab773 350 Gene3D G3DSA:2.40.30.170 43 266 1.1E-70 T 13-10-2018 VAA_01135 a3554a96415b82656b04dad1806ab773 350 SUPERFAMILY SSF111369 46 262 3.27E-39 T 13-10-2018 VAA_02853 8f095e2e7230be0058100149ab56e2c9 247 Pfam PF11153 Protein of unknown function (DUF2931) 6 231 7.1E-53 T 13-10-2018 IPR021326 Protein of unknown function DUF2931 VAA_03748 8f3e373b03ba8c487279369405271160 209 Gene3D G3DSA:3.90.79.10 1 208 2.6E-63 T 13-10-2018 VAA_03748 8f3e373b03ba8c487279369405271160 209 Pfam PF00293 NUDIX domain 58 178 3.6E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_03748 8f3e373b03ba8c487279369405271160 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 3.6E-61 T 13-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VAA_03748 8f3e373b03ba8c487279369405271160 209 SUPERFAMILY SSF55811 11 203 4.47E-47 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_03748 8f3e373b03ba8c487279369405271160 209 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 Gene3D G3DSA:1.20.1260.30 5 129 9.4E-40 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 288 294 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 327 351 5.1E-22 T 13-10-2018 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 153 169 5.1E-22 T 13-10-2018 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 191 5.1E-22 T 13-10-2018 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 285 297 5.1E-22 T 13-10-2018 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 SUPERFAMILY SSF53335 13 516 3.53E-119 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 Gene3D G3DSA:3.40.50.150 130 490 1.2E-80 T 13-10-2018 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 Pfam PF02384 N-6 DNA Methylase 130 449 4.1E-67 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAA_01209 717d6978d5962aa447dab47ad7a8db1f 519 Pfam PF12161 HsdM N-terminal domain 13 120 1.9E-11 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 Gene3D G3DSA:3.40.50.2300 3 121 3.8E-30 T 13-10-2018 VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.8E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 SUPERFAMILY SSF46894 129 232 4.25E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 SMART SM00448 9 119 4.7E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 Gene3D G3DSA:1.10.10.10 122 235 8.4E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 SUPERFAMILY SSF52172 5 131 8.11E-35 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 SMART SM00862 155 231 1.4E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_01139 4d1344d0bd3a02c92428a3e16da6fdae 240 Pfam PF00072 Response regulator receiver domain 11 119 6.5E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 SUPERFAMILY SSF50129 30 125 6.24E-31 T 13-10-2018 IPR011032 GroES-like superfamily VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 Hamap MF_00580 10 kDa chaperonin [groS]. 31 125 24.127 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 ProSitePatterns PS00681 Chaperonins cpn10 signature. 32 56 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 Pfam PF00166 Chaperonin 10 Kd subunit 31 124 2.5E-30 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 SMART SM00883 31 124 5.1E-50 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 Gene3D G3DSA:2.30.33.40 30 125 1.4E-35 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 PRINTS PR00297 10kDa chaperonin signature 54 75 1.1E-26 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 PRINTS PR00297 10kDa chaperonin signature 32 47 1.1E-26 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 PRINTS PR00297 10kDa chaperonin signature 89 101 1.1E-26 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_02600 4cd69f3c3941b80e24c6e87a33f18085 125 PRINTS PR00297 10kDa chaperonin signature 111 124 1.1E-26 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VAA_01085 e7722180ac7b593e9bd5adbc7d815058 169 Gene3D G3DSA:2.70.70.10 9 169 1.4E-61 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_01085 e7722180ac7b593e9bd5adbc7d815058 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VAA_01085 e7722180ac7b593e9bd5adbc7d815058 169 SUPERFAMILY SSF51261 18 166 3.66E-55 T 13-10-2018 IPR011055 Duplicated hybrid motif VAA_01085 e7722180ac7b593e9bd5adbc7d815058 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.9E-50 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VAA_01085 e7722180ac7b593e9bd5adbc7d815058 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.1E-49 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VAA_00970 27c87b777b8cb1b828f9202385d32b00 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 1.1E-136 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VAA_00970 27c87b777b8cb1b828f9202385d32b00 402 Pfam PF07670 Nucleoside recognition 90 185 2.9E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAA_00970 27c87b777b8cb1b828f9202385d32b00 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.2E-70 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VAA_00970 27c87b777b8cb1b828f9202385d32b00 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.6E-25 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 SUPERFAMILY SSF52540 6 204 2.82E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.3E-90 T 13-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.199 T 13-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 Gene3D G3DSA:3.40.50.300 3 213 3.7E-60 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 PRINTS PR00988 Uridine kinase signature 178 191 1.3E-36 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 PRINTS PR00988 Uridine kinase signature 156 167 1.3E-36 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 PRINTS PR00988 Uridine kinase signature 142 152 1.3E-36 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 PRINTS PR00988 Uridine kinase signature 41 52 1.3E-36 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 PRINTS PR00988 Uridine kinase signature 7 24 1.3E-36 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 PRINTS PR00988 Uridine kinase signature 86 101 1.3E-36 T 13-10-2018 VAA_02369 84545a1c16bb9b71805c5b06577070c6 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 3.6E-42 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 SUPERFAMILY SSF47616 86 214 1.99E-29 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 SUPERFAMILY SSF52833 2 88 9.24E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 83 1.3E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 Gene3D G3DSA:1.20.1050.10 88 216 9.9E-49 T 13-10-2018 VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 Gene3D G3DSA:3.40.30.10 6 83 1.5E-26 T 13-10-2018 VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 Pfam PF14497 Glutathione S-transferase, C-terminal domain 133 202 8.3E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAA_01794 474f135d9d1e0b45e33d7490007b3c60 216 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 214 9.9E-88 T 13-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VAA_00047 afbdb5b419feff425f136405c9dfcfb5 370 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 145 302 2.7E-13 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VAA_00047 afbdb5b419feff425f136405c9dfcfb5 370 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 66 370 1.1E-146 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VAA_00047 afbdb5b419feff425f136405c9dfcfb5 370 Hamap MF_00215 Pantothenate kinase [coaA]. 1 370 167.271 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VAA_00047 afbdb5b419feff425f136405c9dfcfb5 370 SUPERFAMILY SSF52540 66 370 2.43E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00047 afbdb5b419feff425f136405c9dfcfb5 370 Gene3D G3DSA:3.40.50.300 61 370 1.4E-91 T 13-10-2018 VAA_02454 c95287de4b57999e2004963b2274af0c 413 Gene3D G3DSA:3.40.50.1950 8 197 6.2E-54 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAA_02454 c95287de4b57999e2004963b2274af0c 413 Pfam PF02441 Flavoprotein 16 186 4.6E-43 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VAA_02454 c95287de4b57999e2004963b2274af0c 413 Gene3D G3DSA:3.40.50.10300 198 413 9.1E-83 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VAA_02454 c95287de4b57999e2004963b2274af0c 413 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 13 409 1.2E-148 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VAA_02454 c95287de4b57999e2004963b2274af0c 413 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 200 384 6.0E-75 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VAA_02454 c95287de4b57999e2004963b2274af0c 413 SUPERFAMILY SSF102645 199 412 1.22E-79 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VAA_02454 c95287de4b57999e2004963b2274af0c 413 SUPERFAMILY SSF52507 10 186 5.1E-59 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 SUPERFAMILY SSF161098 465 705 1.03E-42 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 Gene3D G3DSA:1.10.3720.10 457 719 8.6E-45 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 Gene3D G3DSA:1.10.3720.10 169 440 3.6E-51 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 ProSitePatterns PS00210 Arthropod hemocyanins / insect LSPs signature 2. 41 49 - T 13-10-2018 IPR013788 Hemocyanin/hexamerin VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 SUPERFAMILY SSF161098 175 436 1.05E-41 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 531 709 2.4E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01822 db2211eb9e30b56085c846cafdc30d9c 723 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 239 430 3.0E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_03971 31679700700e85cc8bca550f835f7775 185 SUPERFAMILY SSF52540 77 184 1.96E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03971 31679700700e85cc8bca550f835f7775 185 SUPERFAMILY SSF50615 1 75 7.85E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_03971 31679700700e85cc8bca550f835f7775 185 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.3E-19 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_03971 31679700700e85cc8bca550f835f7775 185 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 183 1.3E-8 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_03971 31679700700e85cc8bca550f835f7775 185 Gene3D G3DSA:2.40.10.170 2 75 1.6E-28 T 13-10-2018 VAA_03971 31679700700e85cc8bca550f835f7775 185 Gene3D G3DSA:3.40.50.300 76 185 1.4E-36 T 13-10-2018 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 2.2E-102 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 SUPERFAMILY SSF54713 142 279 3.92E-47 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 SUPERFAMILY SSF54713 56 138 1.22E-17 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 76.333 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 Pfam PF00889 Elongation factor TS 71 261 4.5E-61 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 Gene3D G3DSA:1.10.8.10 1 56 2.2E-25 T 13-10-2018 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 Gene3D G3DSA:3.30.479.20 57 140 4.2E-26 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VAA_03576 3d871fc6c499da0a6fa9d2ffadcadc5f 281 Gene3D G3DSA:1.10.286.20 185 224 6.0E-24 T 13-10-2018 VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 Pfam PF01228 Glycine radical 16 107 1.6E-23 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 PIRSF PIRSF000378 3 126 7.2E-54 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 3 126 1.6E-68 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 2 126 41.06 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 Gene3D G3DSA:3.20.70.20 7 126 2.3E-25 T 13-10-2018 VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 SUPERFAMILY SSF51998 64 125 1.24E-23 T 13-10-2018 VAA_03681 1703ecb35bc8bcc1dc877fa9b4478151 126 ProSitePatterns PS00850 Glycine radical domain signature. 96 104 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VAA_02804 f63b7babe4922e15405309dcecb6dae3 124 SUPERFAMILY SSF52821 31 106 6.02E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_02804 f63b7babe4922e15405309dcecb6dae3 124 Gene3D G3DSA:3.40.250.10 28 116 3.3E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_02804 f63b7babe4922e15405309dcecb6dae3 124 SMART SM00450 19 119 3.9E-19 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_02804 f63b7babe4922e15405309dcecb6dae3 124 Pfam PF00581 Rhodanese-like domain 32 106 8.3E-14 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_02515 151f588e72292ba6b780ffb235793eb3 148 PIRSF PIRSF000441 6 148 8.1E-29 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAA_02515 151f588e72292ba6b780ffb235793eb3 148 SUPERFAMILY SSF51161 14 146 3.19E-19 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_02515 151f588e72292ba6b780ffb235793eb3 148 Gene3D G3DSA:2.160.10.10 53 148 7.0E-17 T 13-10-2018 VAA_02515 151f588e72292ba6b780ffb235793eb3 148 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 134 0.0028 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 Gene3D G3DSA:3.40.50.2300 4 130 1.9E-40 T 13-10-2018 VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 241 3.2E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 SMART SM00862 165 241 2.8E-10 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 SUPERFAMILY SSF46894 142 242 2.24E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 SUPERFAMILY SSF52172 8 136 1.99E-43 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 SMART SM00448 12 123 3.3E-44 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 Gene3D G3DSA:1.10.10.10 131 244 2.2E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02307 395e7459429612e3fe0edd04e878a7ed 249 Pfam PF00072 Response regulator receiver domain 14 124 8.3E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 3.8E-177 T 13-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 Gene3D G3DSA:3.20.20.70 2 358 4.1E-147 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 SUPERFAMILY SSF51569 4 356 2.64E-129 T 13-10-2018 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 99 111 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 5.3E-111 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 PIRSF PIRSF001359 13 358 1.8E-95 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAA_00184 4623529978ea703b8b1eb2ce253356c0 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 6.8E-90 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VAA_02194 fd0a3ddc29f5abeebef1be44822a8bfa 245 Gene3D G3DSA:3.20.20.70 1 245 1.1E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02194 fd0a3ddc29f5abeebef1be44822a8bfa 245 SUPERFAMILY SSF51366 1 243 8.07E-64 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02194 fd0a3ddc29f5abeebef1be44822a8bfa 245 Pfam PF00977 Histidine biosynthesis protein 1 234 2.9E-75 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VAA_02194 fd0a3ddc29f5abeebef1be44822a8bfa 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.0E-76 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VAA_02194 fd0a3ddc29f5abeebef1be44822a8bfa 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.637 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VAA_03624 d765b951101cf6d07687dff961be1ad9 192 Gene3D G3DSA:1.10.4060.10 123 191 2.7E-6 T 13-10-2018 VAA_03624 d765b951101cf6d07687dff961be1ad9 192 Gene3D G3DSA:2.30.130.40 2 111 7.1E-27 T 13-10-2018 VAA_03624 d765b951101cf6d07687dff961be1ad9 192 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 4 134 4.8E-13 T 13-10-2018 IPR003111 Lon, substrate-binding domain VAA_03624 d765b951101cf6d07687dff961be1ad9 192 SUPERFAMILY SSF88697 4 189 6.46E-43 T 13-10-2018 IPR015947 PUA-like superfamily VAA_03624 d765b951101cf6d07687dff961be1ad9 192 SMART SM00464 4 190 4.9E-4 T 13-10-2018 IPR003111 Lon, substrate-binding domain VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 Pfam PF13396 Phospholipase_D-nuclease N-terminal 61 99 4.5E-7 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 PIRSF PIRSF000850 328 416 0.0051 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 PIRSF PIRSF000850 145 292 37.0 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 PIRSF PIRSF000850 428 515 0.32 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 Gene3D G3DSA:3.30.870.10 354 495 7.2E-23 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 Pfam PF13091 PLD-like domain 174 308 9.7E-16 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 Pfam PF13091 PLD-like domain 367 485 4.9E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 Gene3D G3DSA:3.30.870.10 155 349 2.0E-38 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 SUPERFAMILY SSF56024 109 353 7.4E-52 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 SUPERFAMILY SSF56024 314 511 2.24E-44 T 13-10-2018 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 52 524 1.1E-154 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 SMART SM00155 437 464 4.0E-6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 SMART SM00155 259 286 6.1E-6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VAA_02127 5bbba89b0b1128686379cb92dff3bc18 524 Hamap MF_00190 Cardiolipin synthase A [clsA]. 42 524 50.045 T 13-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VAA_03098 698a3004ddeb18718f127c705c78d968 227 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 219 5.4E-76 T 13-10-2018 IPR005261 Conserved hypothetical protein CHP00659 VAA_03098 698a3004ddeb18718f127c705c78d968 227 Pfam PF04172 LrgB-like family 7 219 4.3E-75 T 13-10-2018 IPR007300 CidB/LrgB family VAA_00363 92ec9946df4866d949bd1cd13a9bb08e 449 Pfam PF00589 Phage integrase family 194 338 2.9E-8 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_00363 92ec9946df4866d949bd1cd13a9bb08e 449 Gene3D G3DSA:1.10.150.130 40 139 1.6E-5 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_00363 92ec9946df4866d949bd1cd13a9bb08e 449 Gene3D G3DSA:1.10.443.10 180 393 1.0E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00363 92ec9946df4866d949bd1cd13a9bb08e 449 SUPERFAMILY SSF56349 181 392 1.53E-17 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 Gene3D G3DSA:1.20.970.10 10 183 1.0E-120 T 13-10-2018 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 2.4E-15 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 SUPERFAMILY SSF52418 70 329 4.19E-93 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 4.8E-102 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.478 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 SUPERFAMILY SSF47648 1 67 1.57E-18 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 Gene3D G3DSA:3.40.1030.10 67 321 1.0E-120 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02249 5065b0e3f4ca4f2c6deae5b84a5d5156 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 2.4E-126 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 SMART SM00487 30 236 3.3E-55 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 10 391 50.209 T 13-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 165 173 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 Pfam PF00271 Helicase conserved C-terminal domain 247 353 5.4E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 Gene3D G3DSA:3.40.50.300 231 395 3.2E-46 T 13-10-2018 VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 SUPERFAMILY SSF52540 87 367 2.0E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 Pfam PF00270 DEAD/DEAH box helicase 35 209 5.3E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 Gene3D G3DSA:3.40.50.300 2 224 2.5E-73 T 13-10-2018 VAA_00615 b82deef1ee95b9e5c3b2df19b27ecc6c 438 SMART SM00490 272 353 1.5E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01895 c5f868485c2dc38e878040bd6c236133 320 Gene3D G3DSA:2.30.130.10 1 72 6.8E-29 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 VAA_01895 c5f868485c2dc38e878040bd6c236133 320 Gene3D G3DSA:3.40.50.150 181 320 5.9E-41 T 13-10-2018 VAA_01895 c5f868485c2dc38e878040bd6c236133 320 SUPERFAMILY SSF88697 4 73 1.92E-17 T 13-10-2018 IPR015947 PUA-like superfamily VAA_01895 c5f868485c2dc38e878040bd6c236133 320 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 170 310 5.6E-25 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VAA_01895 c5f868485c2dc38e878040bd6c236133 320 Gene3D G3DSA:3.30.750.80 73 180 5.3E-35 T 13-10-2018 VAA_01895 c5f868485c2dc38e878040bd6c236133 320 SMART SM00359 3 87 1.8E-13 T 13-10-2018 IPR002478 PUA domain GO:0003723 VAA_01895 c5f868485c2dc38e878040bd6c236133 320 SUPERFAMILY SSF53335 78 306 3.22E-52 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03605 5c55886e6d9abd9c9ee201bd1dcf8eae 316 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 303 1.0E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_03605 5c55886e6d9abd9c9ee201bd1dcf8eae 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 298 3.7E-35 T 13-10-2018 IPR000160 GGDEF domain VAA_03605 5c55886e6d9abd9c9ee201bd1dcf8eae 316 SUPERFAMILY SSF55073 145 302 2.35E-32 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03605 5c55886e6d9abd9c9ee201bd1dcf8eae 316 Gene3D G3DSA:3.30.70.270 126 304 1.1E-39 T 13-10-2018 VAA_03605 5c55886e6d9abd9c9ee201bd1dcf8eae 316 SMART SM00267 129 303 2.0E-39 T 13-10-2018 IPR000160 GGDEF domain VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 Gene3D G3DSA:3.90.780.10 330 500 1.2E-29 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 SUPERFAMILY SSF56300 20 327 5.45E-74 T 13-10-2018 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 6.9E-21 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 3.2E-14 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 PRINTS PR01607 Apyrase family signature 257 277 1.8E-14 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 PRINTS PR01607 Apyrase family signature 203 220 1.8E-14 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 PRINTS PR01607 Apyrase family signature 26 44 1.8E-14 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 PRINTS PR01607 Apyrase family signature 230 253 1.8E-14 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 SUPERFAMILY SSF55816 338 493 1.24E-20 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_00150 8e9b11a204230e9e42e37ff67e103e88 521 Gene3D G3DSA:3.60.21.10 21 325 1.9E-75 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 1.1E-54 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 Gene3D G3DSA:3.40.190.10 130 248 3.5E-93 T 13-10-2018 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 SUPERFAMILY SSF53850 24 276 2.17E-72 T 13-10-2018 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 Gene3D G3DSA:3.40.190.10 27 277 3.5E-93 T 13-10-2018 VAA_01898 a27d0a49029699f327195e342e4b3aaf 290 Pfam PF13416 Bacterial extracellular solute-binding protein 40 276 7.2E-32 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 Gene3D G3DSA:1.25.40.10 107 179 3.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 Gene3D G3DSA:1.25.40.10 180 356 1.8E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 Gene3D G3DSA:1.25.40.10 18 106 3.2E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 Pfam PF13176 Tetratricopeptide repeat 72 95 0.017 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 SUPERFAMILY SSF81901 40 247 7.32E-17 T 13-10-2018 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 Pfam PF13181 Tetratricopeptide repeat 181 214 0.028 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 5 388 37.27 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 SMART SM00028 215 248 43.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 SMART SM00028 70 103 69.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02286 c1906f2f13394c838ed6895429e99dd0 390 SMART SM00028 181 214 0.06 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02698 5b224a35eb85b66e61ece2109bb4686a 202 Pfam PF08525 Opacity-associated protein A N-terminal motif 51 78 7.7E-7 T 13-10-2018 IPR013731 Opacity-associated protein A, N-terminal VAA_02698 5b224a35eb85b66e61ece2109bb4686a 202 Gene3D G3DSA:3.10.450.350 108 201 1.5E-14 T 13-10-2018 VAA_02698 5b224a35eb85b66e61ece2109bb4686a 202 Pfam PF04225 Opacity-associated protein A LysM-like domain 119 202 6.2E-38 T 13-10-2018 IPR007340 Opacity-associated protein A VAA_02931 b1bb65f13de4556cd40e6d8dd003e172 291 SUPERFAMILY SSF51556 3 291 1.18E-86 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_02931 b1bb65f13de4556cd40e6d8dd003e172 291 Pfam PF02126 Phosphotriesterase family 3 290 2.0E-90 T 13-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 VAA_02931 b1bb65f13de4556cd40e6d8dd003e172 291 Gene3D G3DSA:3.20.20.140 1 290 1.3E-96 T 13-10-2018 VAA_02931 b1bb65f13de4556cd40e6d8dd003e172 291 PIRSF PIRSF016839 1 291 1.4E-107 T 13-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 VAA_01581 86ba0709322845b98ea21a8788ff9801 391 PIRSF PIRSF036883 8 391 1.5E-119 T 13-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative VAA_01581 86ba0709322845b98ea21a8788ff9801 391 Gene3D G3DSA:1.10.3210.10 141 386 5.5E-38 T 13-10-2018 VAA_01581 86ba0709322845b98ea21a8788ff9801 391 Pfam PF08668 HDOD domain 153 289 4.4E-28 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAA_01581 86ba0709322845b98ea21a8788ff9801 391 Pfam PF00072 Response regulator receiver domain 15 124 1.2E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01581 86ba0709322845b98ea21a8788ff9801 391 Gene3D G3DSA:3.40.50.2300 2 140 9.3E-16 T 13-10-2018 VAA_01581 86ba0709322845b98ea21a8788ff9801 391 SUPERFAMILY SSF52172 13 137 3.42E-16 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01581 86ba0709322845b98ea21a8788ff9801 391 SMART SM00448 13 128 0.0046 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01581 86ba0709322845b98ea21a8788ff9801 391 SUPERFAMILY SSF109604 147 365 2.24E-35 T 13-10-2018 VAA_01892 841b3fc04a75d25258e4f47baa6a8e57 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.4E-44 T 13-10-2018 IPR006214 Bax inhibitor 1-related VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 4.7E-107 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 SUPERFAMILY SSF52374 5 334 3.06E-91 T 13-10-2018 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.448 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 6.1E-77 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 Gene3D G3DSA:1.10.240.10 191 304 4.4E-138 T 13-10-2018 VAA_02639 36e367e5cfc65e62095e6ca6d84b79a7 338 Gene3D G3DSA:3.40.50.620 5 333 4.4E-138 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00732 b96d61f2297502fb363c814a32b12077 184 Pfam PF00114 Pilin (bacterial filament) 83 183 5.8E-17 T 13-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VAA_00732 b96d61f2297502fb363c814a32b12077 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 53 73 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00732 b96d61f2297502fb363c814a32b12077 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 50 74 4.6E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00732 b96d61f2297502fb363c814a32b12077 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 52 75 1.4E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00732 b96d61f2297502fb363c814a32b12077 184 SUPERFAMILY SSF54523 55 183 1.22E-25 T 13-10-2018 VAA_00732 b96d61f2297502fb363c814a32b12077 184 Gene3D G3DSA:3.30.700.10 55 183 9.6E-32 T 13-10-2018 VAA_01573 c80a1efefb44a677057aec54c96e8522 144 Pfam PF04076 Bacterial OB fold (BOF) protein 47 142 2.1E-11 T 13-10-2018 IPR005220 Bacterial OB-fold VAA_01573 c80a1efefb44a677057aec54c96e8522 144 SUPERFAMILY SSF101756 47 144 3.27E-23 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily VAA_01573 c80a1efefb44a677057aec54c96e8522 144 Gene3D G3DSA:2.40.50.200 39 144 1.0E-18 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily VAA_02302 e9cf7e754c02411c534dab20f04d0d0e 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 4.1E-115 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAA_02302 e9cf7e754c02411c534dab20f04d0d0e 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 9.1E-85 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAA_02302 e9cf7e754c02411c534dab20f04d0d0e 453 PIRSF PIRSF006066 1 447 8.3E-137 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VAA_00798 1e57c2904985f48f270921f69de158bd 649 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 5.0E-241 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Pfam PF01434 Peptidase family M41 386 595 7.0E-81 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Gene3D G3DSA:2.40.50.920 27 103 2.4E-31 T 13-10-2018 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 3.0E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_00798 1e57c2904985f48f270921f69de158bd 649 SUPERFAMILY SSF140990 406 601 6.15E-75 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 624 37.17 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Gene3D G3DSA:1.10.8.60 327 400 1.4E-26 T 13-10-2018 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Gene3D G3DSA:3.40.50.300 140 326 5.0E-70 T 13-10-2018 VAA_00798 1e57c2904985f48f270921f69de158bd 649 SUPERFAMILY SSF52540 147 395 3.27E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00798 1e57c2904985f48f270921f69de158bd 649 SMART SM00382 188 327 3.1E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00798 1e57c2904985f48f270921f69de158bd 649 Pfam PF06480 FtsH Extracellular 8 96 1.1E-12 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VAA_00798 1e57c2904985f48f270921f69de158bd 649 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VAA_00798 1e57c2904985f48f270921f69de158bd 649 Gene3D G3DSA:1.20.58.760 401 605 1.1E-71 T 13-10-2018 VAA_02731 3aa726947b29099f935c167cf2c20fc4 234 Gene3D G3DSA:3.40.50.300 1 230 4.9E-58 T 13-10-2018 VAA_02731 3aa726947b29099f935c167cf2c20fc4 234 Pfam PF00005 ABC transporter 18 157 5.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02731 3aa726947b29099f935c167cf2c20fc4 234 SUPERFAMILY SSF52540 1 230 1.02E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02731 3aa726947b29099f935c167cf2c20fc4 234 SMART SM00382 24 215 8.4E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02731 3aa726947b29099f935c167cf2c20fc4 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02731 3aa726947b29099f935c167cf2c20fc4 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 4.6E-99 T 13-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VAA_01090 319501378531a8bfeee02a8daa2a8072 291 Pfam PF00571 CBS domain 67 124 5.0E-9 T 13-10-2018 IPR000644 CBS domain VAA_01090 319501378531a8bfeee02a8daa2a8072 291 Pfam PF00571 CBS domain 138 187 2.1E-6 T 13-10-2018 IPR000644 CBS domain VAA_01090 319501378531a8bfeee02a8daa2a8072 291 Pfam PF03471 Transporter associated domain 204 279 2.2E-23 T 13-10-2018 IPR005170 Transporter-associated domain VAA_01090 319501378531a8bfeee02a8daa2a8072 291 SMART SM01091 203 281 7.1E-31 T 13-10-2018 IPR005170 Transporter-associated domain VAA_01090 319501378531a8bfeee02a8daa2a8072 291 SUPERFAMILY SSF54631 63 200 9.91E-34 T 13-10-2018 VAA_01090 319501378531a8bfeee02a8daa2a8072 291 Gene3D G3DSA:3.10.580.10 49 195 9.1E-55 T 13-10-2018 VAA_01090 319501378531a8bfeee02a8daa2a8072 291 SUPERFAMILY SSF56176 198 280 5.73E-23 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAA_01090 319501378531a8bfeee02a8daa2a8072 291 Gene3D G3DSA:3.30.465.10 196 288 3.0E-31 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VAA_01090 319501378531a8bfeee02a8daa2a8072 291 SMART SM00116 76 125 0.0015 T 13-10-2018 IPR000644 CBS domain VAA_01090 319501378531a8bfeee02a8daa2a8072 291 SMART SM00116 139 187 0.028 T 13-10-2018 IPR000644 CBS domain VAA_00648 7301ff846fb831d3cc64948743e9cdb0 120 Pfam PF02501 Type II secretion system (T2SS), protein I 43 118 5.7E-22 T 13-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VAA_00648 7301ff846fb831d3cc64948743e9cdb0 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 10 106 8.4E-36 T 13-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VAA_00648 7301ff846fb831d3cc64948743e9cdb0 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.9E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00648 7301ff846fb831d3cc64948743e9cdb0 120 SUPERFAMILY SSF54523 40 118 1.57E-22 T 13-10-2018 VAA_00648 7301ff846fb831d3cc64948743e9cdb0 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 26 2.1E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00648 7301ff846fb831d3cc64948743e9cdb0 120 Gene3D G3DSA:3.30.1300.30 33 120 6.4E-34 T 13-10-2018 VAA_03444 2a5b3c1ae5e45dec26c3b431ac23b767 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 5.2E-58 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAA_03444 2a5b3c1ae5e45dec26c3b431ac23b767 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.6E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAA_03444 2a5b3c1ae5e45dec26c3b431ac23b767 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.6E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAA_03444 2a5b3c1ae5e45dec26c3b431ac23b767 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.6E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAA_03444 2a5b3c1ae5e45dec26c3b431ac23b767 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.6E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VAA_03444 2a5b3c1ae5e45dec26c3b431ac23b767 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 256 6.1E-76 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 Gene3D G3DSA:3.40.50.2300 113 223 3.1E-41 T 13-10-2018 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 Pfam PF02378 Phosphotransferase system, EIIC 247 510 4.1E-16 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 SUPERFAMILY SSF52794 2 101 2.62E-27 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 Gene3D G3DSA:3.40.50.2300 1 103 3.4E-23 T 13-10-2018 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 87 4.8E-13 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 125 210 1.5E-16 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 124 207 2.7E-37 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 228 566 3.7E-140 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VAA_01005 950f0cd2043b1959aef6cd4c288bf8b1 580 SUPERFAMILY SSF52794 122 223 1.92E-37 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAA_03214 7cb48b83fe04e5670d09c76d6b156ab7 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 1.3E-54 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB VAA_03214 7cb48b83fe04e5670d09c76d6b156ab7 196 Gene3D G3DSA:3.40.50.10610 39 188 8.5E-44 T 13-10-2018 VAA_03214 7cb48b83fe04e5670d09c76d6b156ab7 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 5 187 8.1E-74 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB VAA_02654 bad301a1e2e726e85c7a9c2fbfecc3d4 335 SUPERFAMILY SSF53474 32 301 1.8E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02654 bad301a1e2e726e85c7a9c2fbfecc3d4 335 PIRSF PIRSF005211 1 335 1.3E-104 T 13-10-2018 IPR012020 AB hydrolase 4 family VAA_02654 bad301a1e2e726e85c7a9c2fbfecc3d4 335 Pfam PF00561 alpha/beta hydrolase fold 63 302 7.0E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Gene3D G3DSA:1.10.287.130 200 314 3.0E-33 T 13-10-2018 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 SMART SM00304 196 249 6.1E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 465 6.5E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 174 2.4E-60 T 13-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Gene3D G3DSA:3.30.450.210 31 163 5.2E-52 T 13-10-2018 IPR038515 CpxA, periplasmic domain superfamily VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 SMART SM00387 356 466 2.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Gene3D G3DSA:3.30.565.10 315 465 1.1E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 SUPERFAMILY SSF47384 236 312 1.45E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 SMART SM00388 250 312 6.2E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 311 2.7E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 1.5E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 SUPERFAMILY SSF55874 302 464 2.62E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02572 ee754d4e4550cbaadf67ca8aa0e7462e 466 Pfam PF00672 HAMP domain 197 244 3.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01780 891fcd3b81b657c146c162cd7d65ebe9 353 SUPERFAMILY SSF56112 31 353 1.21E-88 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_01780 891fcd3b81b657c146c162cd7d65ebe9 353 Gene3D G3DSA:1.10.510.10 85 283 2.7E-120 T 13-10-2018 VAA_01780 891fcd3b81b657c146c162cd7d65ebe9 353 Pfam PF01636 Phosphotransferase enzyme family 61 289 5.2E-42 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VAA_01780 891fcd3b81b657c146c162cd7d65ebe9 353 Gene3D G3DSA:3.30.200.70 38 133 2.7E-120 T 13-10-2018 VAA_01780 891fcd3b81b657c146c162cd7d65ebe9 353 Hamap MF_01497 Stress response kinase A [srkA]. 29 343 46.149 T 13-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VAA_01780 891fcd3b81b657c146c162cd7d65ebe9 353 Gene3D G3DSA:1.20.1270.170 174 332 2.7E-120 T 13-10-2018 VAA_00120 b17274400d2233c17898ab9ae462a770 397 Pfam PF12221 Bacterial membrane protein N terminal 1 57 7.7E-15 T 13-10-2018 IPR020980 Menbrane protein HflK, N-terminal VAA_00120 b17274400d2233c17898ab9ae462a770 397 Pfam PF01145 SPFH domain / Band 7 family 90 261 5.4E-29 T 13-10-2018 IPR001107 Band 7 domain VAA_00120 b17274400d2233c17898ab9ae462a770 397 SMART SM00244 86 246 7.7E-50 T 13-10-2018 IPR001107 Band 7 domain VAA_00120 b17274400d2233c17898ab9ae462a770 397 TIGRFAM TIGR01933 hflK: HflK protein 88 348 1.7E-123 T 13-10-2018 IPR010201 HflK GO:0016021 VAA_00120 b17274400d2233c17898ab9ae462a770 397 PRINTS PR00721 Stomatin signature 93 115 5.7E-7 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_00120 b17274400d2233c17898ab9ae462a770 397 PRINTS PR00721 Stomatin signature 196 219 5.7E-7 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_00120 b17274400d2233c17898ab9ae462a770 397 PRINTS PR00721 Stomatin signature 140 161 5.7E-7 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_00120 b17274400d2233c17898ab9ae462a770 397 SUPERFAMILY SSF117892 120 251 8.37E-22 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VAA_00120 b17274400d2233c17898ab9ae462a770 397 Gene3D G3DSA:3.30.479.30 116 248 9.6E-22 T 13-10-2018 VAA_01692 b75092229cf72ab0fe35a898c5d4625e 267 Gene3D G3DSA:2.60.120.260 29 159 1.4E-9 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_01692 b75092229cf72ab0fe35a898c5d4625e 267 SUPERFAMILY SSF49785 2 156 1.87E-18 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 SUPERFAMILY SSF52540 1 208 7.65E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 Gene3D G3DSA:1.20.272.10 213 338 1.8E-38 T 13-10-2018 VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 331 1.0E-33 T 13-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 SUPERFAMILY SSF48019 211 332 6.63E-32 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 Gene3D G3DSA:3.40.50.300 1 139 4.2E-46 T 13-10-2018 VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 Gene3D G3DSA:1.10.8.60 143 212 1.7E-19 T 13-10-2018 VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 5.2E-103 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VAA_01095 2c34d8c2461bc1774a2a399fff7bba74 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.0E-46 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VAA_03250 06d36070cf296c7c679125bb89a7268f 554 PIRSF PIRSF002741 11 554 1.7E-118 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAA_03250 06d36070cf296c7c679125bb89a7268f 554 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 99 120 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site VAA_03250 06d36070cf296c7c679125bb89a7268f 554 Gene3D G3DSA:3.90.76.10 83 206 8.9E-191 T 13-10-2018 VAA_03250 06d36070cf296c7c679125bb89a7268f 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 473 1.3E-93 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_03250 06d36070cf296c7c679125bb89a7268f 554 SUPERFAMILY SSF53850 49 541 2.17E-148 T 13-10-2018 VAA_03250 06d36070cf296c7c679125bb89a7268f 554 Gene3D G3DSA:3.10.105.10 308 523 8.9E-191 T 13-10-2018 VAA_03250 06d36070cf296c7c679125bb89a7268f 554 Gene3D G3DSA:3.40.190.10 54 535 8.9E-191 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 Gene3D G3DSA:3.50.50.100 6 412 4.1E-116 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 SUPERFAMILY SSF51905 8 352 7.3E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03211 44fe3277a280032630f58ee7aa03e179 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 338 4.7E-63 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-13 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 134 2.1E-13 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 2.1E-13 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.1E-13 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 4.3E-7 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 4.3E-7 T 13-10-2018 VAA_03211 44fe3277a280032630f58ee7aa03e179 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.3E-7 T 13-10-2018 VAA_02238 74684ad67143b6c06dae894234c52a83 247 Pfam PF03640 Secreted repeat of unknown function 34 73 1.7E-10 T 13-10-2018 IPR005297 Lipoprotein repeat VAA_02238 74684ad67143b6c06dae894234c52a83 247 Pfam PF03640 Secreted repeat of unknown function 92 132 8.1E-16 T 13-10-2018 IPR005297 Lipoprotein repeat VAA_02238 74684ad67143b6c06dae894234c52a83 247 Pfam PF03640 Secreted repeat of unknown function 150 182 1.4E-7 T 13-10-2018 IPR005297 Lipoprotein repeat VAA_02238 74684ad67143b6c06dae894234c52a83 247 Pfam PF03640 Secreted repeat of unknown function 204 246 8.9E-17 T 13-10-2018 IPR005297 Lipoprotein repeat VAA_02190 9c6450342b4a4a4ac8999b28bc0bc517 777 Pfam PF03971 Monomeric isocitrate dehydrogenase 43 775 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VAA_02190 9c6450342b4a4a4ac8999b28bc0bc517 777 Gene3D G3DSA:3.40.718.10 448 686 2.4E-7 T 13-10-2018 VAA_02190 9c6450342b4a4a4ac8999b28bc0bc517 777 SUPERFAMILY SSF53659 41 776 0.0 T 13-10-2018 VAA_02190 9c6450342b4a4a4ac8999b28bc0bc517 777 PIRSF PIRSF009407 37 777 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VAA_02190 9c6450342b4a4a4ac8999b28bc0bc517 777 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 37 776 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 Gene3D G3DSA:1.10.260.40 1 61 2.0E-17 T 13-10-2018 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 2.0E-133 T 13-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 1.7E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 SMART SM00354 4 74 7.5E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 13-10-2018 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 Gene3D G3DSA:3.40.50.2300 163 279 6.4E-62 T 13-10-2018 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 Pfam PF13377 Periplasmic binding protein-like domain 168 309 1.4E-18 T 13-10-2018 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 Gene3D G3DSA:3.40.50.2300 68 302 6.4E-62 T 13-10-2018 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 SUPERFAMILY SSF47413 4 60 1.2E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01143 7b1753e5584c5c3f8ce46ffae8094c5a 315 SUPERFAMILY SSF53822 63 308 2.55E-57 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.4E-57 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 Gene3D G3DSA:3.40.50.1360 7 207 5.7E-78 T 13-10-2018 VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.397 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.9E-68 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 SUPERFAMILY SSF75445 127 198 1.57E-23 T 13-10-2018 VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 SUPERFAMILY SSF100950 1 146 1.16E-47 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_03793 aec172f3f9a5ddd20251bfccc76f9025 218 Gene3D G3DSA:3.30.70.260 125 196 5.7E-78 T 13-10-2018 VAA_01515 5175c69159dd352bb20d506d3cf5a930 171 Pfam PF00293 NUDIX domain 33 147 9.9E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_01515 5175c69159dd352bb20d506d3cf5a930 171 Gene3D G3DSA:3.90.79.10 1 167 3.9E-48 T 13-10-2018 VAA_01515 5175c69159dd352bb20d506d3cf5a930 171 SUPERFAMILY SSF55811 2 168 6.36E-45 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_01515 5175c69159dd352bb20d506d3cf5a930 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_01097 f70f33e371dfa86a41b86a7db2b43627 156 SUPERFAMILY SSF75217 1 154 1.83E-50 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_01097 f70f33e371dfa86a41b86a7db2b43627 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.4E-77 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAA_01097 f70f33e371dfa86a41b86a7db2b43627 156 Gene3D G3DSA:3.40.1280.10 1 156 1.8E-53 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_01097 f70f33e371dfa86a41b86a7db2b43627 156 PIRSF PIRSF004505 1 155 2.1E-44 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAA_01097 f70f33e371dfa86a41b86a7db2b43627 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.687 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAA_01097 f70f33e371dfa86a41b86a7db2b43627 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 2.6E-49 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VAA_00058 36ef3249b5f153612f47c589e45f6f83 162 SUPERFAMILY SSF82784 8 160 1.31E-47 T 13-10-2018 IPR036102 OsmC/Ohr superfamily VAA_00058 36ef3249b5f153612f47c589e45f6f83 162 Pfam PF02566 OsmC-like protein 62 160 1.3E-14 T 13-10-2018 IPR003718 OsmC/Ohr family VAA_00058 36ef3249b5f153612f47c589e45f6f83 162 Gene3D G3DSA:3.30.300.20 1 162 1.0E-52 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.8E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 Pfam PF00005 ABC transporter 26 181 1.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 SUPERFAMILY SSF52540 5 252 4.75E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 5.4E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 Gene3D G3DSA:3.40.50.300 3 324 2.0E-89 T 13-10-2018 VAA_00777 6e5af3d73569f733e4742b10fcb83980 327 SMART SM00382 34 231 8.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02907 992fdc080c4195fef79745c72f3a37d1 396 Gene3D G3DSA:1.20.1250.20 201 384 4.5E-15 T 13-10-2018 VAA_02907 992fdc080c4195fef79745c72f3a37d1 396 Pfam PF07690 Major Facilitator Superfamily 17 346 2.9E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_02907 992fdc080c4195fef79745c72f3a37d1 396 Gene3D G3DSA:1.20.1250.20 6 199 8.9E-8 T 13-10-2018 VAA_02907 992fdc080c4195fef79745c72f3a37d1 396 SUPERFAMILY SSF103473 15 381 1.57E-37 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 SUPERFAMILY SSF54980 366 428 6.47E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 SUPERFAMILY SSF52540 197 375 6.64E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 4.9E-31 T 13-10-2018 IPR025121 GTPase HflX, N-terminal VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 13-10-2018 IPR032305 GTP-binding protein, middle domain VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 2.8E-156 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.248 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 PIRSF PIRSF006809 3 423 7.1E-150 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.6E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 Gene3D G3DSA:3.40.50.11060 18 138 5.3E-37 T 13-10-2018 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 Gene3D G3DSA:3.40.50.300 197 369 8.7E-43 T 13-10-2018 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_00119 d9f79af58353e11ac2850d9059cc2841 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VAA_02855 0ba1e86d9347267f9d5d1be2624da4ff 207 Gene3D G3DSA:3.30.530.20 22 204 1.6E-55 T 13-10-2018 IPR023393 START-like domain superfamily VAA_02855 0ba1e86d9347267f9d5d1be2624da4ff 207 SUPERFAMILY SSF55961 15 195 5.07E-40 T 13-10-2018 VAA_02855 0ba1e86d9347267f9d5d1be2624da4ff 207 PIRSF PIRSF039033 1 207 1.8E-58 T 13-10-2018 IPR028347 START domain-containing protein VAA_02855 0ba1e86d9347267f9d5d1be2624da4ff 207 Pfam PF01852 START domain 17 199 3.8E-13 T 13-10-2018 IPR002913 START domain GO:0008289 VAA_00422 2dfd1005acd0ffaf3ed931b3181c3a55 132 Gene3D G3DSA:3.40.50.2300 1 128 1.2E-32 T 13-10-2018 VAA_00422 2dfd1005acd0ffaf3ed931b3181c3a55 132 SUPERFAMILY SSF52172 1 120 1.38E-32 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00422 2dfd1005acd0ffaf3ed931b3181c3a55 132 Pfam PF00072 Response regulator receiver domain 5 112 5.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00422 2dfd1005acd0ffaf3ed931b3181c3a55 132 SMART SM00448 2 112 3.0E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02968 ef627f1ecb805d75e39ee1e52f873fa9 328 SUPERFAMILY SSF55347 129 294 1.31E-23 T 13-10-2018 VAA_02968 ef627f1ecb805d75e39ee1e52f873fa9 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 3.8E-25 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAA_02968 ef627f1ecb805d75e39ee1e52f873fa9 328 SUPERFAMILY SSF51735 4 153 2.22E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02968 ef627f1ecb805d75e39ee1e52f873fa9 328 Gene3D G3DSA:3.40.50.720 1 136 2.1E-35 T 13-10-2018 VAA_02968 ef627f1ecb805d75e39ee1e52f873fa9 328 Gene3D G3DSA:3.30.360.10 137 327 1.4E-52 T 13-10-2018 VAA_00976 9ff44007744755a1efce337c346ed780 456 SUPERFAMILY SSF109604 270 442 3.7E-34 T 13-10-2018 VAA_00976 9ff44007744755a1efce337c346ed780 456 Pfam PF13487 HD domain 130 187 2.2E-11 T 13-10-2018 VAA_00976 9ff44007744755a1efce337c346ed780 456 Pfam PF13487 HD domain 334 396 1.9E-16 T 13-10-2018 VAA_00976 9ff44007744755a1efce337c346ed780 456 SUPERFAMILY SSF109604 16 230 2.59E-13 T 13-10-2018 VAA_00976 9ff44007744755a1efce337c346ed780 456 SMART SM00471 279 414 4.8E-12 T 13-10-2018 IPR003607 HD/PDEase domain VAA_00976 9ff44007744755a1efce337c346ed780 456 Gene3D G3DSA:1.10.3210.10 262 453 7.2E-58 T 13-10-2018 VAA_02177 eb3739df036a0d6160605d69d727381d 405 SUPERFAMILY SSF51161 293 402 3.01E-20 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_02177 eb3739df036a0d6160605d69d727381d 405 SUPERFAMILY SSF53448 4 357 5.63E-68 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02177 eb3739df036a0d6160605d69d727381d 405 Gene3D G3DSA:2.160.10.10 287 403 1.2E-35 T 13-10-2018 VAA_02177 eb3739df036a0d6160605d69d727381d 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 3.6E-150 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_02177 eb3739df036a0d6160605d69d727381d 405 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 335 361 5.8E-4 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02177 eb3739df036a0d6160605d69d727381d 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_02177 eb3739df036a0d6160605d69d727381d 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_02177 eb3739df036a0d6160605d69d727381d 405 Gene3D G3DSA:3.90.550.10 2 286 7.5E-81 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02177 eb3739df036a0d6160605d69d727381d 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.824 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_02177 eb3739df036a0d6160605d69d727381d 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.0E-61 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAA_02177 eb3739df036a0d6160605d69d727381d 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VAA_02243 60b974b4b5b9dae6949d824d6c2d0090 206 SUPERFAMILY SSF55821 1 203 4.27E-65 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAA_02243 60b974b4b5b9dae6949d824d6c2d0090 206 Gene3D G3DSA:3.90.870.10 1 205 4.6E-69 T 13-10-2018 VAA_02243 60b974b4b5b9dae6949d824d6c2d0090 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.6E-70 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VAA_02243 60b974b4b5b9dae6949d824d6c2d0090 206 Pfam PF01300 Telomere recombination 23 198 2.6E-46 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VAA_03296 24678dadb541bc625e66365206dd8f80 244 SMART SM01236 74 175 1.6E-7 T 13-10-2018 VAA_03296 24678dadb541bc625e66365206dd8f80 244 Pfam PF14518 Iron-containing redox enzyme 40 211 9.0E-26 T 13-10-2018 VAA_03296 24678dadb541bc625e66365206dd8f80 244 SUPERFAMILY SSF48613 3 219 4.45E-58 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VAA_03296 24678dadb541bc625e66365206dd8f80 244 Gene3D G3DSA:1.20.910.10 5 221 5.6E-58 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VAA_03791 093758aa01806649410678d12bc56fe6 102 Pfam PF05164 Cell division protein ZapA 6 89 3.3E-18 T 13-10-2018 IPR007838 Cell division protein ZapA-like VAA_03791 093758aa01806649410678d12bc56fe6 102 Gene3D G3DSA:1.10.20.30 1 47 8.7E-20 T 13-10-2018 VAA_03791 093758aa01806649410678d12bc56fe6 102 SUPERFAMILY SSF102829 6 95 2.88E-23 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily VAA_01501 9343ef79dbb10b027fc30e6f47dd4ed7 278 Gene3D G3DSA:3.40.50.720 1 277 6.7E-111 T 13-10-2018 VAA_01501 9343ef79dbb10b027fc30e6f47dd4ed7 278 Pfam PF07055 Enoyl reductase FAD binding domain 205 268 3.6E-25 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_01501 9343ef79dbb10b027fc30e6f47dd4ed7 278 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 1 197 1.0E-81 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_02237 cf2a88e92b14a7792c443b8e099c7043 265 SUPERFAMILY SSF53850 35 263 2.02E-29 T 13-10-2018 VAA_02237 cf2a88e92b14a7792c443b8e099c7043 265 Gene3D G3DSA:3.40.190.10 116 229 5.1E-77 T 13-10-2018 VAA_02237 cf2a88e92b14a7792c443b8e099c7043 265 Gene3D G3DSA:3.40.190.10 39 263 5.1E-77 T 13-10-2018 VAA_02237 cf2a88e92b14a7792c443b8e099c7043 265 Pfam PF13531 Bacterial extracellular solute-binding protein 38 263 5.0E-26 T 13-10-2018 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 Gene3D G3DSA:3.40.50.720 235 443 1.8E-77 T 13-10-2018 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 SUPERFAMILY SSF51735 1 195 6.17E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 Gene3D G3DSA:3.40.50.720 1 202 3.6E-78 T 13-10-2018 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 SMART SM00984 320 424 1.7E-46 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 5.1E-39 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 Gene3D G3DSA:1.20.5.100 203 234 3.3E-18 T 13-10-2018 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 5.6E-31 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 2.0E-63 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 PIRSF PIRSF000124 1 439 1.6E-147 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 PIRSF PIRSF500134 1 442 1.0E-189 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.0E-142 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 SUPERFAMILY SSF52413 308 435 3.14E-38 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VAA_01127 bc27a29fed05f014607bc799d9c0e6c0 443 SUPERFAMILY SSF48179 204 301 4.08E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_02845 a7006f675a7de79984184ee0aa74e257 219 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 31 219 3.9E-47 T 13-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 VAA_02845 a7006f675a7de79984184ee0aa74e257 219 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 33 219 3.7E-60 T 13-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 Gene3D G3DSA:1.10.3210.10 127 234 5.5E-19 T 13-10-2018 VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 Gene3D G3DSA:1.10.3210.10 1 126 1.4E-33 T 13-10-2018 VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 SUPERFAMILY SSF109604 25 257 1.2E-45 T 13-10-2018 VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 258 1.3E-73 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 Gene3D G3DSA:1.10.3410.10 235 261 3.5E-7 T 13-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 Pfam PF01966 HD domain 60 138 2.2E-10 T 13-10-2018 IPR006674 HD domain VAA_00069 f7aafb330c69345de355b61b2927cdfa 261 SMART SM00471 56 254 1.4E-9 T 13-10-2018 IPR003607 HD/PDEase domain VAA_02376 ce93844be36f214c1c99c7e929b8cb74 138 Pfam PF00571 CBS domain 73 126 2.0E-12 T 13-10-2018 IPR000644 CBS domain VAA_02376 ce93844be36f214c1c99c7e929b8cb74 138 Pfam PF00571 CBS domain 6 61 3.8E-8 T 13-10-2018 IPR000644 CBS domain VAA_02376 ce93844be36f214c1c99c7e929b8cb74 138 SUPERFAMILY SSF54631 2 126 1.52E-30 T 13-10-2018 VAA_02376 ce93844be36f214c1c99c7e929b8cb74 138 Gene3D G3DSA:3.10.580.10 1 129 6.2E-28 T 13-10-2018 VAA_02376 ce93844be36f214c1c99c7e929b8cb74 138 SMART SM00116 13 61 0.013 T 13-10-2018 IPR000644 CBS domain VAA_02376 ce93844be36f214c1c99c7e929b8cb74 138 SMART SM00116 80 127 5.4E-8 T 13-10-2018 IPR000644 CBS domain VAA_01380 fe341a39184524aa72ee3a8668611524 512 SUPERFAMILY SSF58104 203 512 2.22E-66 T 13-10-2018 VAA_01380 fe341a39184524aa72ee3a8668611524 512 SMART SM00283 250 511 1.0E-59 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01380 fe341a39184524aa72ee3a8668611524 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 309 477 2.0E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01380 fe341a39184524aa72ee3a8668611524 512 SMART SM00304 181 235 8.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01380 fe341a39184524aa72ee3a8668611524 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 274 303 1.6E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01380 fe341a39184524aa72ee3a8668611524 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 1.6E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01380 fe341a39184524aa72ee3a8668611524 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 348 375 1.6E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01380 fe341a39184524aa72ee3a8668611524 512 Gene3D G3DSA:1.10.287.950 180 512 1.5E-67 T 13-10-2018 VAA_02063 00b1f2702d5116a8487bcfeb048ef681 160 SUPERFAMILY SSF55729 4 147 2.29E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02063 00b1f2702d5116a8487bcfeb048ef681 160 Pfam PF00583 Acetyltransferase (GNAT) family 24 146 8.5E-18 T 13-10-2018 IPR000182 GNAT domain VAA_02063 00b1f2702d5116a8487bcfeb048ef681 160 Gene3D G3DSA:3.40.630.30 4 137 3.0E-33 T 13-10-2018 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 5.3E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 371 3.1E-125 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 Gene3D G3DSA:3.40.630.10 28 360 9.0E-78 T 13-10-2018 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 SUPERFAMILY SSF53187 3 377 2.74E-53 T 13-10-2018 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 63.382 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 SUPERFAMILY SSF55031 177 291 2.24E-23 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 Pfam PF07687 Peptidase dimerisation domain 174 285 1.4E-26 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAA_02617 ccd6bd4ca4929d11d352b14ae03eb054 378 Gene3D G3DSA:3.30.70.360 177 292 9.0E-78 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 SUPERFAMILY SSF56425 251 366 2.39E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 PIRSF PIRSF000171 13 261 2.2E-27 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 PIRSF PIRSF000171 349 545 8.3E-12 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.4E-9 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 24 43 7.4E-9 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 23 45 1.5E-5 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 383 390 1.5E-5 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 Gene3D G3DSA:3.50.50.60 23 417 6.1E-154 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 SUPERFAMILY SSF51905 18 460 3.83E-74 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 SUPERFAMILY SSF46977 438 538 2.09E-32 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 Gene3D G3DSA:1.20.58.100 438 548 8.7E-45 T 13-10-2018 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 Pfam PF00890 FAD binding domain 23 405 1.5E-102 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 22 533 1.3E-210 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 534 4.7E-14 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03782 10e56f20ef220b3fe4ae2e3c9501fe52 548 Gene3D G3DSA:3.90.700.10 261 371 6.1E-154 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02825 1370a266b8345a47ee6a6940143da79d 275 Pfam PF11060 Protein of unknown function (DUF2861) 22 271 6.5E-77 T 13-10-2018 IPR021290 Protein of unknown function DUF2861 VAA_01349 a7b08938f9a70826370f427b1f2c7c40 542 SMART SM00283 280 541 1.2E-62 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01349 a7b08938f9a70826370f427b1f2c7c40 542 SUPERFAMILY SSF58104 233 542 6.8E-70 T 13-10-2018 VAA_01349 a7b08938f9a70826370f427b1f2c7c40 542 Pfam PF00672 HAMP domain 215 261 3.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01349 a7b08938f9a70826370f427b1f2c7c40 542 SMART SM00304 213 265 5.9E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01349 a7b08938f9a70826370f427b1f2c7c40 542 Gene3D G3DSA:1.10.287.950 212 542 1.2E-71 T 13-10-2018 VAA_01349 a7b08938f9a70826370f427b1f2c7c40 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 508 7.2E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02697 3681606188949f81ef35469b8f96a39b 206 SUPERFAMILY SSF54534 7 205 4.71E-54 T 13-10-2018 VAA_02697 3681606188949f81ef35469b8f96a39b 206 Gene3D G3DSA:3.10.50.40 69 206 6.1E-49 T 13-10-2018 VAA_02697 3681606188949f81ef35469b8f96a39b 206 Gene3D G3DSA:1.10.287.460 4 68 6.3E-19 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VAA_02697 3681606188949f81ef35469b8f96a39b 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 1.1E-22 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VAA_02697 3681606188949f81ef35469b8f96a39b 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 1.1E-26 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAA_03293 a244fe754bb3b192660acda45572900d 218 Gene3D G3DSA:1.10.10.10 122 218 2.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03293 a244fe754bb3b192660acda45572900d 218 SUPERFAMILY SSF52172 1 118 5.12E-35 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03293 a244fe754bb3b192660acda45572900d 218 SMART SM00862 145 216 9.9E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03293 a244fe754bb3b192660acda45572900d 218 SUPERFAMILY SSF46894 118 216 1.36E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03293 a244fe754bb3b192660acda45572900d 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.1E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_03293 a244fe754bb3b192660acda45572900d 218 Gene3D G3DSA:3.40.50.2300 1 121 9.3E-36 T 13-10-2018 VAA_03293 a244fe754bb3b192660acda45572900d 218 SMART SM00448 1 112 1.9E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03293 a244fe754bb3b192660acda45572900d 218 Pfam PF00072 Response regulator receiver domain 4 112 8.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01670 551d39c9a7a68d0fc83efe87f3b2f599 699 Pfam PF03968 OstA-like protein 57 189 1.8E-17 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VAA_01670 551d39c9a7a68d0fc83efe87f3b2f599 699 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 691 17.312 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VAA_01670 551d39c9a7a68d0fc83efe87f3b2f599 699 Pfam PF04453 Organic solvent tolerance protein 297 688 1.1E-113 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VAA_01670 551d39c9a7a68d0fc83efe87f3b2f599 699 Gene3D G3DSA:2.60.450.10 48 98 9.2E-8 T 13-10-2018 VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 PRINTS PR01438 Universal stress protein signature 163 181 2.9E-7 T 13-10-2018 IPR006015 Universal stress protein A VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 PRINTS PR01438 Universal stress protein signature 242 254 2.9E-7 T 13-10-2018 IPR006015 Universal stress protein A VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 PRINTS PR01438 Universal stress protein signature 260 282 2.9E-7 T 13-10-2018 IPR006015 Universal stress protein A VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 Pfam PF00582 Universal stress protein family 2 155 1.7E-13 T 13-10-2018 IPR006016 UspA VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 Pfam PF00582 Universal stress protein family 212 282 4.1E-11 T 13-10-2018 IPR006016 UspA VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 SUPERFAMILY SSF52402 1 155 5.61E-14 T 13-10-2018 VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 Gene3D G3DSA:3.40.50.12370 3 282 1.6E-63 T 13-10-2018 VAA_00955 06cba4263bc2ff1ac13cf899584f369b 282 SUPERFAMILY SSF52402 165 282 7.79E-21 T 13-10-2018 VAA_03529 25a49f5a63df839006975f9f23214837 143 Pfam PF02169 LPP20 lipoprotein 22 118 1.4E-8 T 13-10-2018 IPR024952 Lipoprotein LPP20-like VAA_03529 25a49f5a63df839006975f9f23214837 143 PIRSF PIRSF028687 1 143 2.6E-59 T 13-10-2018 IPR007293 Flagellar protein FlgP VAA_02130 a1ff466878fe7755c6a31c80333d8e91 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 1.7E-47 T 13-10-2018 IPR014320 Phage shock protein, PspC VAA_02130 a1ff466878fe7755c6a31c80333d8e91 129 Pfam PF04024 PspC domain 4 62 5.8E-15 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VAA_01994 e8a6d2c74031a87eaa398663823217e7 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01994 e8a6d2c74031a87eaa398663823217e7 223 SUPERFAMILY SSF52540 1 216 1.49E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01994 e8a6d2c74031a87eaa398663823217e7 223 SMART SM00382 30 218 2.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01994 e8a6d2c74031a87eaa398663823217e7 223 Pfam PF00005 ABC transporter 21 167 1.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01994 e8a6d2c74031a87eaa398663823217e7 223 Gene3D G3DSA:3.40.50.300 1 223 4.8E-56 T 13-10-2018 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 Pfam PF02743 Cache domain 36 260 3.6E-24 T 13-10-2018 IPR033479 Double Cache domain 1 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 Gene3D G3DSA:3.30.450.20 52 270 9.8E-49 T 13-10-2018 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 Pfam PF00672 HAMP domain 300 347 3.3E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 Gene3D G3DSA:1.10.287.950 299 629 1.0E-70 T 13-10-2018 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 Gene3D G3DSA:3.30.450.20 64 170 9.8E-49 T 13-10-2018 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 SMART SM00283 367 628 1.5E-70 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 595 3.0E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 SMART SM00304 298 352 2.8E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 SUPERFAMILY SSF103190 89 177 2.17E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VAA_02525 9da020e03a12fe617106745a3ea3c3a6 629 SUPERFAMILY SSF58104 320 629 9.16E-78 T 13-10-2018 VAA_00204 7cda423043cb6b09427bf5c8147f19fd 684 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 178 629 1.5E-217 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAA_00204 7cda423043cb6b09427bf5c8147f19fd 684 Gene3D G3DSA:3.20.20.540 249 562 2.4E-154 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAA_00204 7cda423043cb6b09427bf5c8147f19fd 684 Pfam PF01964 Radical SAM ThiC family 179 627 4.1E-198 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAA_00204 7cda423043cb6b09427bf5c8147f19fd 684 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 178 631 99.282 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAA_00204 7cda423043cb6b09427bf5c8147f19fd 684 Pfam PF13667 ThiC-associated domain 57 139 2.5E-32 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VAA_01126 b04535699a23a3375fb0686be3420f35 306 SUPERFAMILY SSF53448 3 253 9.64E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01126 b04535699a23a3375fb0686be3420f35 306 Pfam PF00535 Glycosyl transferase family 2 10 163 1.3E-13 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_01126 b04535699a23a3375fb0686be3420f35 306 Gene3D G3DSA:3.90.550.10 1 221 3.4E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_03395 1b5a1156bd38ba8ddc49081642d6695b 198 SUPERFAMILY SSF54593 5 197 4.89E-63 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_03395 1b5a1156bd38ba8ddc49081642d6695b 198 Pfam PF06185 YecM protein 13 196 1.9E-67 T 13-10-2018 IPR010393 Protein of unknown function DUF991 VAA_03395 1b5a1156bd38ba8ddc49081642d6695b 198 Gene3D G3DSA:3.10.180.10 6 198 2.3E-61 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_01719 0790a9896e025890bc36a0fedc526e70 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 8.7E-87 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VAA_01719 0790a9896e025890bc36a0fedc526e70 295 Pfam PF04085 rod shape-determining protein MreC 123 269 4.0E-41 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VAA_01719 0790a9896e025890bc36a0fedc526e70 295 Gene3D G3DSA:2.40.10.350 180 257 6.2E-37 T 13-10-2018 VAA_01719 0790a9896e025890bc36a0fedc526e70 295 Gene3D G3DSA:2.40.10.340 122 266 6.2E-37 T 13-10-2018 VAA_01719 0790a9896e025890bc36a0fedc526e70 295 PIRSF PIRSF038471 2 283 1.2E-82 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VAA_01890 3b73987b1b9caf54bc770a5b36097a1d 372 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 180 365 1.0E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01890 3b73987b1b9caf54bc770a5b36097a1d 372 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 162 258 4.1E-22 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_01890 3b73987b1b9caf54bc770a5b36097a1d 372 SUPERFAMILY SSF161098 162 353 1.13E-40 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01890 3b73987b1b9caf54bc770a5b36097a1d 372 Gene3D G3DSA:1.10.3720.10 157 370 7.2E-49 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02026 dd7f41dcc357783d47d295d14e22fa15 296 Gene3D G3DSA:3.20.20.60 3 294 1.6E-88 T 13-10-2018 VAA_02026 dd7f41dcc357783d47d295d14e22fa15 296 PIRSF PIRSF015582 2 296 2.4E-74 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like VAA_02026 dd7f41dcc357783d47d295d14e22fa15 296 SUPERFAMILY SSF51621 7 240 9.07E-61 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_02026 dd7f41dcc357783d47d295d14e22fa15 296 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 5.4E-79 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 VAA_02026 dd7f41dcc357783d47d295d14e22fa15 296 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 291 3.1E-136 T 13-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 SUPERFAMILY SSF53822 60 332 2.9E-89 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 Gene3D G3DSA:1.10.260.40 1 59 5.7E-26 T 13-10-2018 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 Gene3D G3DSA:3.40.50.2300 61 306 3.0E-81 T 13-10-2018 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 7.3E-41 T 13-10-2018 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 SMART SM00354 1 71 1.5E-32 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 Gene3D G3DSA:3.40.50.2300 160 289 3.0E-81 T 13-10-2018 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VAA_02587 e6b92e4f92883ce8fd07305e4de6d97b 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01507 463b7067a5ec6a51992ae220eaeecb6d 239 SMART SM00796 5 205 2.6E-67 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VAA_01507 463b7067a5ec6a51992ae220eaeecb6d 239 Gene3D G3DSA:3.30.1360.40 6 80 1.9E-11 T 13-10-2018 VAA_01507 463b7067a5ec6a51992ae220eaeecb6d 239 Gene3D G3DSA:2.40.100.10 91 228 2.2E-45 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_01507 463b7067a5ec6a51992ae220eaeecb6d 239 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 204 1.1E-55 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VAA_01507 463b7067a5ec6a51992ae220eaeecb6d 239 SUPERFAMILY SSF160467 7 79 1.96E-10 T 13-10-2018 VAA_01507 463b7067a5ec6a51992ae220eaeecb6d 239 SUPERFAMILY SSF50891 92 221 1.44E-35 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_02671 fc988a83ec24646bf55f6026bb6eff44 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.5E-65 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VAA_02671 fc988a83ec24646bf55f6026bb6eff44 200 SUPERFAMILY SSF52166 8 199 1.83E-73 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02671 fc988a83ec24646bf55f6026bb6eff44 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.88 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02671 fc988a83ec24646bf55f6026bb6eff44 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 5.8E-76 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02671 fc988a83ec24646bf55f6026bb6eff44 200 Gene3D G3DSA:3.40.1370.10 5 200 1.7E-69 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VAA_03805 03bda75ea0540731e1ee250fcb409f35 261 Pfam PF04784 Protein of unknown function, DUF547 88 198 3.5E-23 T 13-10-2018 IPR006869 Domain of unknown function DUF547 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 Pfam PF01590 GAF domain 28 158 3.7E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 410 419 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_00967 e9f7f3d11257498176303cea48ff831b 531 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 221 234 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 Gene3D G3DSA:3.40.50.300 184 367 1.6E-63 T 13-10-2018 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 283 298 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 Pfam PF00158 Sigma-54 interaction domain 197 363 4.2E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 Gene3D G3DSA:1.10.10.60 468 526 1.4E-9 T 13-10-2018 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 SUPERFAMILY SSF52540 196 430 9.06E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00967 e9f7f3d11257498176303cea48ff831b 531 Gene3D G3DSA:1.10.8.60 368 432 2.9E-20 T 13-10-2018 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 SUPERFAMILY SSF55781 5 162 4.8E-16 T 13-10-2018 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 SMART SM00065 24 172 1.0E-4 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 SUPERFAMILY SSF46689 473 521 1.93E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00967 e9f7f3d11257498176303cea48ff831b 531 Gene3D G3DSA:3.30.450.40 4 178 1.1E-12 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_00967 e9f7f3d11257498176303cea48ff831b 531 SMART SM00382 217 360 1.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 4.3E-27 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 Gene3D G3DSA:3.40.50.170 1 209 2.7E-87 T 13-10-2018 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 SUPERFAMILY SSF53328 5 210 6.02E-66 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.711 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 Pfam PF00551 Formyl transferase 6 183 8.6E-50 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 Gene3D G3DSA:3.10.25.10 210 314 1.8E-35 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 2.6E-106 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 SUPERFAMILY SSF50486 208 310 2.94E-32 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VAA_01770 c2f9024701a93a32dd538450a8b7e822 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VAA_04075 2734318989ab095d76c829e2c0134b1d 152 Gene3D G3DSA:1.10.10.10 60 105 1.6E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_04075 2734318989ab095d76c829e2c0134b1d 152 Gene3D G3DSA:1.10.10.10 106 152 2.2E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_04075 2734318989ab095d76c829e2c0134b1d 152 Gene3D G3DSA:1.10.10.10 12 58 2.5E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_04075 2734318989ab095d76c829e2c0134b1d 152 Hamap MF_01114 Regulatory protein RecX [recX]. 11 152 11.892 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VAA_04075 2734318989ab095d76c829e2c0134b1d 152 Pfam PF02631 RecX family 41 152 3.8E-27 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VAA_00576 b574aa5136d3b7653db30b35e090b158 258 Pfam PF01026 TatD related DNase 2 252 3.9E-63 T 13-10-2018 IPR001130 TatD family GO:0016788 VAA_00576 b574aa5136d3b7653db30b35e090b158 258 Gene3D G3DSA:3.20.20.140 1 254 8.0E-78 T 13-10-2018 VAA_00576 b574aa5136d3b7653db30b35e090b158 258 PIRSF PIRSF005902 1 256 6.5E-69 T 13-10-2018 IPR001130 TatD family GO:0016788 VAA_00576 b574aa5136d3b7653db30b35e090b158 258 SUPERFAMILY SSF51556 1 253 2.84E-77 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_00576 b574aa5136d3b7653db30b35e090b158 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 4.9E-70 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VAA_02557 502636aac2ecf45219d922f252168417 161 SUPERFAMILY SSF55252 91 154 4.97E-16 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VAA_02557 502636aac2ecf45219d922f252168417 161 SUPERFAMILY SSF46785 12 81 5.99E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02557 502636aac2ecf45219d922f252168417 161 Gene3D G3DSA:1.10.10.10 9 81 8.0E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02557 502636aac2ecf45219d922f252168417 161 Pfam PF02863 Arginine repressor, C-terminal domain 93 150 1.1E-16 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VAA_02557 502636aac2ecf45219d922f252168417 161 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 96 136 1.0E-13 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VAA_02557 502636aac2ecf45219d922f252168417 161 Hamap MF_00173 Arginine repressor [argR]. 1 161 39.052 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_02557 502636aac2ecf45219d922f252168417 161 Gene3D G3DSA:3.30.1360.40 82 161 1.2E-20 T 13-10-2018 VAA_02557 502636aac2ecf45219d922f252168417 161 PRINTS PR01467 Bacterial arginine repressor signature 127 142 1.6E-17 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_02557 502636aac2ecf45219d922f252168417 161 PRINTS PR01467 Bacterial arginine repressor signature 32 45 1.6E-17 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_02557 502636aac2ecf45219d922f252168417 161 PRINTS PR01467 Bacterial arginine repressor signature 49 64 1.6E-17 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_02557 502636aac2ecf45219d922f252168417 161 PRINTS PR01467 Bacterial arginine repressor signature 97 110 1.6E-17 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_02557 502636aac2ecf45219d922f252168417 161 Pfam PF01316 Arginine repressor, DNA binding domain 19 80 3.1E-14 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 537 4.5E-8 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 SUPERFAMILY SSF51011 466 542 5.2E-17 T 13-10-2018 VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 SUPERFAMILY SSF51445 3 460 6.53E-154 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 Gene3D G3DSA:2.60.40.1180 467 544 2.3E-18 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 Pfam PF00128 Alpha amylase, catalytic domain 28 362 1.9E-120 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 SMART SM00642 13 405 5.3E-153 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 Gene3D G3DSA:3.20.20.80 5 458 2.8E-195 T 13-10-2018 VAA_02896 1d695027b481e47b00486a9c7d47e7b9 545 Gene3D G3DSA:3.90.400.10 105 175 2.8E-195 T 13-10-2018 VAA_03802 b04662899421cbe90ce8b5c992067652 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.248 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VAA_03802 b04662899421cbe90ce8b5c992067652 363 Gene3D G3DSA:3.40.718.10 1 363 3.8E-157 T 13-10-2018 VAA_03802 b04662899421cbe90ce8b5c992067652 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 1.2E-164 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VAA_03802 b04662899421cbe90ce8b5c992067652 363 SMART SM01329 7 356 3.5E-201 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VAA_03802 b04662899421cbe90ce8b5c992067652 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VAA_03802 b04662899421cbe90ce8b5c992067652 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 7.3E-136 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VAA_03802 b04662899421cbe90ce8b5c992067652 363 SUPERFAMILY SSF53659 4 360 1.24E-122 T 13-10-2018 VAA_01536 6aa1523954b690a1bd7d0bb1e82e5da7 437 PIRSF PIRSF000141 2 429 2.3E-172 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAA_01536 6aa1523954b690a1bd7d0bb1e82e5da7 437 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 4.2E-178 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAA_01536 6aa1523954b690a1bd7d0bb1e82e5da7 437 SUPERFAMILY SSF51905 1 422 5.68E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01536 6aa1523954b690a1bd7d0bb1e82e5da7 437 Pfam PF00890 FAD binding domain 5 410 4.9E-55 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_01536 6aa1523954b690a1bd7d0bb1e82e5da7 437 Gene3D G3DSA:3.50.50.60 3 82 6.4E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_01536 6aa1523954b690a1bd7d0bb1e82e5da7 437 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 426 47.156 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VAA_03799 1425339c8a3cceba43e2d7d6d7e9bfa4 355 Gene3D G3DSA:3.40.50.2000 207 316 1.2E-5 T 13-10-2018 VAA_03799 1425339c8a3cceba43e2d7d6d7e9bfa4 355 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 9 317 1.2E-109 T 13-10-2018 IPR005262 Conserved hypothetical protein CHP00661 VAA_03799 1425339c8a3cceba43e2d7d6d7e9bfa4 355 SUPERFAMILY SSF53756 18 307 3.49E-10 T 13-10-2018 VAA_03799 1425339c8a3cceba43e2d7d6d7e9bfa4 355 Pfam PF13528 Glycosyl transferase family 1 9 307 1.1E-36 T 13-10-2018 VAA_01055 0bb70ff44cea4a7311a0248c5e4f753d 101 Gene3D G3DSA:3.30.70.920 6 75 3.5E-22 T 13-10-2018 VAA_01055 0bb70ff44cea4a7311a0248c5e4f753d 101 Pfam PF03927 NapD protein 6 80 7.0E-29 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VAA_01055 0bb70ff44cea4a7311a0248c5e4f753d 101 Hamap MF_02200 Chaperone NapD [napD]. 6 82 18.876 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VAA_00769 38291ba03a4126ba58517e503592bf9f 541 Gene3D G3DSA:1.10.3720.10 285 540 1.5E-32 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00769 38291ba03a4126ba58517e503592bf9f 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 360 533 5.1E-6 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00769 38291ba03a4126ba58517e503592bf9f 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 1.9E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00769 38291ba03a4126ba58517e503592bf9f 541 SUPERFAMILY SSF161098 282 535 9.38E-37 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00769 38291ba03a4126ba58517e503592bf9f 541 Gene3D G3DSA:1.10.3720.10 10 267 6.3E-52 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00769 38291ba03a4126ba58517e503592bf9f 541 SUPERFAMILY SSF161098 7 258 3.27E-44 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01653 72c2e7d8a4f57f5287ca163dc5aa0385 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 3.5E-50 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 VAA_01653 72c2e7d8a4f57f5287ca163dc5aa0385 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.31 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 VAA_01653 72c2e7d8a4f57f5287ca163dc5aa0385 187 SUPERFAMILY SSF143456 1 187 9.16E-68 T 13-10-2018 VAA_01653 72c2e7d8a4f57f5287ca163dc5aa0385 187 Gene3D G3DSA:3.40.1740.10 1 187 2.9E-70 T 13-10-2018 VAA_02067 6aadf8f2dbae553c44e55f29361349df 237 SUPERFAMILY SSF52402 7 220 1.9E-66 T 13-10-2018 VAA_02067 6aadf8f2dbae553c44e55f29361349df 237 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 224 51.47 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAA_02067 6aadf8f2dbae553c44e55f29361349df 237 Gene3D G3DSA:3.40.50.620 6 236 1.6E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02067 6aadf8f2dbae553c44e55f29361349df 237 Pfam PF06508 Queuosine biosynthesis protein QueC 9 218 7.3E-85 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAA_02067 6aadf8f2dbae553c44e55f29361349df 237 PIRSF PIRSF006293 6 231 2.6E-83 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAA_02067 6aadf8f2dbae553c44e55f29361349df 237 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 211 7.5E-82 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VAA_00447 98ff584beba05781ee9f14d961507d3f 229 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 46 226 3.7E-62 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VAA_00447 98ff584beba05781ee9f14d961507d3f 229 Pfam PF03602 Conserved hypothetical protein 95 49 224 3.9E-61 T 13-10-2018 VAA_00447 98ff584beba05781ee9f14d961507d3f 229 PIRSF PIRSF004553 48 228 3.8E-56 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VAA_00447 98ff584beba05781ee9f14d961507d3f 229 SUPERFAMILY SSF53335 49 225 4.15E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00447 98ff584beba05781ee9f14d961507d3f 229 Gene3D G3DSA:3.40.50.150 36 229 2.0E-63 T 13-10-2018 VAA_01912 64365d8bebadeea9252fb2ce1be85e11 273 Gene3D G3DSA:3.40.50.12740 1 161 3.0E-34 T 13-10-2018 VAA_01912 64365d8bebadeea9252fb2ce1be85e11 273 SUPERFAMILY SSF52172 1 146 1.27E-30 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01912 64365d8bebadeea9252fb2ce1be85e11 273 Gene3D G3DSA:3.60.40.10 162 270 3.5E-13 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAA_01912 64365d8bebadeea9252fb2ce1be85e11 273 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 193 268 8.0E-10 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAA_01912 64365d8bebadeea9252fb2ce1be85e11 273 SMART SM00448 1 115 5.0E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01912 64365d8bebadeea9252fb2ce1be85e11 273 Pfam PF00072 Response regulator receiver domain 3 115 1.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01256 28bbb7c18c498626627fdac789191174 305 SMART SM00260 9 148 1.2E-15 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01256 28bbb7c18c498626627fdac789191174 305 Gene3D G3DSA:2.30.30.40 20 142 2.0E-23 T 13-10-2018 VAA_01256 28bbb7c18c498626627fdac789191174 305 SUPERFAMILY SSF50341 11 153 2.62E-29 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01256 28bbb7c18c498626627fdac789191174 305 Pfam PF01584 CheW-like domain 14 150 1.5E-29 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01256 28bbb7c18c498626627fdac789191174 305 SMART SM00448 174 291 2.4E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01256 28bbb7c18c498626627fdac789191174 305 SUPERFAMILY SSF52172 172 296 1.18E-22 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01256 28bbb7c18c498626627fdac789191174 305 Gene3D G3DSA:2.40.50.180 32 147 2.0E-23 T 13-10-2018 VAA_01256 28bbb7c18c498626627fdac789191174 305 Gene3D G3DSA:3.40.50.2300 164 302 1.2E-23 T 13-10-2018 VAA_01256 28bbb7c18c498626627fdac789191174 305 Pfam PF00072 Response regulator receiver domain 176 290 2.2E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01256 28bbb7c18c498626627fdac789191174 305 PIRSF PIRSF002867 1 299 1.8E-88 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VAA_02489 2279dbb52ef2c0de717b43eae6f6bb21 367 SUPERFAMILY SSF51735 9 354 1.03E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02489 2279dbb52ef2c0de717b43eae6f6bb21 367 Gene3D G3DSA:3.90.25.10 200 365 1.4E-68 T 13-10-2018 VAA_02489 2279dbb52ef2c0de717b43eae6f6bb21 367 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 12 360 1.9E-157 T 13-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 VAA_02489 2279dbb52ef2c0de717b43eae6f6bb21 367 Pfam PF16363 GDP-mannose 4,6 dehydratase 19 249 1.6E-25 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_02489 2279dbb52ef2c0de717b43eae6f6bb21 367 Gene3D G3DSA:3.40.50.720 8 199 3.8E-48 T 13-10-2018 VAA_03780 2b4b4aedf26dc198a60332f9aa78dfce 207 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 138 190 1.8E-19 T 13-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VAA_03780 2b4b4aedf26dc198a60332f9aa78dfce 207 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 96 2.0E-34 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VAA_03780 2b4b4aedf26dc198a60332f9aa78dfce 207 PIRSF PIRSF016938 1 202 5.1E-36 T 13-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VAA_03780 2b4b4aedf26dc198a60332f9aa78dfce 207 SUPERFAMILY SSF89069 4 67 4.71E-20 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VAA_03780 2b4b4aedf26dc198a60332f9aa78dfce 207 Gene3D G3DSA:1.10.10.880 2 67 1.5E-23 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VAA_03309 feb9b1fcbad35b6919d150a2ba1bc3fc 198 SUPERFAMILY SSF46689 2 75 1.7E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03309 feb9b1fcbad35b6919d150a2ba1bc3fc 198 Gene3D G3DSA:1.10.357.10 1 192 3.4E-40 T 13-10-2018 VAA_03309 feb9b1fcbad35b6919d150a2ba1bc3fc 198 Pfam PF13305 WHG domain 93 172 2.0E-10 T 13-10-2018 IPR025996 WHG domain VAA_03309 feb9b1fcbad35b6919d150a2ba1bc3fc 198 SUPERFAMILY SSF48498 83 195 7.19E-19 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_02105 8b8ac39624f4515fbf48a49138352012 554 Pfam PF00733 Asparagine synthase 211 366 1.8E-56 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VAA_02105 8b8ac39624f4515fbf48a49138352012 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 3.4E-39 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VAA_02105 8b8ac39624f4515fbf48a49138352012 554 PIRSF PIRSF001589 1 382 9.7E-105 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VAA_02105 8b8ac39624f4515fbf48a49138352012 554 PIRSF PIRSF001589 363 506 2.3E-27 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VAA_02105 8b8ac39624f4515fbf48a49138352012 554 Gene3D G3DSA:3.40.50.620 194 514 2.2E-112 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02105 8b8ac39624f4515fbf48a49138352012 554 SUPERFAMILY SSF52402 209 480 3.93E-74 T 13-10-2018 VAA_02105 8b8ac39624f4515fbf48a49138352012 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 1.8E-116 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VAA_02105 8b8ac39624f4515fbf48a49138352012 554 Gene3D G3DSA:3.60.20.10 2 193 4.5E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02105 8b8ac39624f4515fbf48a49138352012 554 SUPERFAMILY SSF56235 1 196 7.63E-56 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02107 c45445ab428444d3d894b3c96c828723 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 29 237 9.8E-58 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VAA_02107 c45445ab428444d3d894b3c96c828723 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 247 463 3.8E-46 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VAA_02107 c45445ab428444d3d894b3c96c828723 485 Pfam PF00854 POT family 108 222 3.4E-29 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VAA_02107 c45445ab428444d3d894b3c96c828723 485 Pfam PF00854 POT family 255 428 1.8E-30 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VAA_02107 c45445ab428444d3d894b3c96c828723 485 SUPERFAMILY SSF103473 31 457 7.98E-42 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_02107 c45445ab428444d3d894b3c96c828723 485 Gene3D G3DSA:1.20.1250.20 248 478 3.5E-59 T 13-10-2018 VAA_02107 c45445ab428444d3d894b3c96c828723 485 Gene3D G3DSA:1.20.1250.20 21 247 2.7E-73 T 13-10-2018 VAA_02107 c45445ab428444d3d894b3c96c828723 485 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 176 188 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VAA_03216 e6769f282cb8c94ed78bbec21d83057f 129 Gene3D G3DSA:2.60.40.3230 18 128 2.8E-28 T 13-10-2018 IPR038483 YcfL-like superfamily VAA_03216 e6769f282cb8c94ed78bbec21d83057f 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.5E-28 T 13-10-2018 IPR010824 Protein of unknown function DUF1425 VAA_02445 28bc72e75dc8284e4d5548be8d1b1ca6 109 Gene3D G3DSA:1.10.260.40 7 102 1.2E-22 T 13-10-2018 VAA_02445 28bc72e75dc8284e4d5548be8d1b1ca6 109 SUPERFAMILY SSF47413 7 74 6.48E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_02445 28bc72e75dc8284e4d5548be8d1b1ca6 109 SMART SM00530 10 69 2.3E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_02445 28bc72e75dc8284e4d5548be8d1b1ca6 109 Pfam PF12844 Helix-turn-helix domain 10 67 9.8E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00035 65efdee98e17b6afa5a15334eab7f9f4 114 Gene3D G3DSA:1.10.10.60 22 104 1.1E-9 T 13-10-2018 VAA_00035 65efdee98e17b6afa5a15334eab7f9f4 114 Pfam PF01527 Transposase 16 90 6.4E-15 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VAA_00035 65efdee98e17b6afa5a15334eab7f9f4 114 SUPERFAMILY SSF46689 17 108 6.63E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_04030 65efdee98e17b6afa5a15334eab7f9f4 114 Gene3D G3DSA:1.10.10.60 22 104 1.1E-9 T 13-10-2018 VAA_04030 65efdee98e17b6afa5a15334eab7f9f4 114 Pfam PF01527 Transposase 16 90 6.4E-15 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VAA_04030 65efdee98e17b6afa5a15334eab7f9f4 114 SUPERFAMILY SSF46689 17 108 6.63E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01675 f8cbead23ac1f7534ae0fbe675aba208 126 Gene3D G3DSA:2.60.40.1470 1 126 1.2E-46 T 13-10-2018 IPR036767 ApaG domain superfamily VAA_01675 f8cbead23ac1f7534ae0fbe675aba208 126 Pfam PF04379 ApaG domain 18 102 5.5E-33 T 13-10-2018 IPR007474 ApaG domain VAA_01675 f8cbead23ac1f7534ae0fbe675aba208 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.502 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG VAA_01675 f8cbead23ac1f7534ae0fbe675aba208 126 SUPERFAMILY SSF110069 6 126 1.19E-47 T 13-10-2018 IPR036767 ApaG domain superfamily VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 6.6E-44 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 SUPERFAMILY SSF46604 89 138 7.06E-14 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.5E-10 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 8.0E-37 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 SUPERFAMILY SSF51344 5 87 2.35E-24 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 Gene3D G3DSA:2.60.15.10 4 91 1.6E-30 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.2E-28 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 Gene3D G3DSA:1.20.5.440 92 135 1.3E-18 T 13-10-2018 VAA_00824 5751ddc1b74dea5269bf3024085bf841 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.834 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_01275 0e5847f03942a4613076a4110138b70e 310 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 138 1.1E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_01275 0e5847f03942a4613076a4110138b70e 310 SUPERFAMILY SSF161098 71 292 9.29E-39 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01275 0e5847f03942a4613076a4110138b70e 310 Gene3D G3DSA:1.10.3720.10 64 301 4.4E-47 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01275 0e5847f03942a4613076a4110138b70e 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 299 1.3E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_03719 45533c8945cbf7be8b3cafa8e4c00420 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03719 45533c8945cbf7be8b3cafa8e4c00420 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.3E-156 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03719 45533c8945cbf7be8b3cafa8e4c00420 360 Pfam PF00953 Glycosyl transferase family 4 99 283 5.7E-37 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VAA_03719 45533c8945cbf7be8b3cafa8e4c00420 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03719 45533c8945cbf7be8b3cafa8e4c00420 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03719 45533c8945cbf7be8b3cafa8e4c00420 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.597 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03175 4149afefff28333cff5fb27a146c2af8 187 Gene3D G3DSA:1.20.1270.340 4 104 4.8E-15 T 13-10-2018 IPR038338 PriB/PriC superfamily VAA_03175 4149afefff28333cff5fb27a146c2af8 187 Pfam PF07445 Primosomal replication protein priC 10 184 1.8E-51 T 13-10-2018 IPR010890 Primosomal replication PriB/PriC VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 5.4E-47 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 Gene3D G3DSA:3.40.1190.20 6 310 4.9E-112 T 13-10-2018 IPR029056 Ribokinase-like VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 Gene3D G3DSA:3.40.50.620 323 475 6.9E-38 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 8.9E-62 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.881 T 13-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 Pfam PF01467 Cytidylyltransferase-like 345 469 5.9E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.4E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 SUPERFAMILY SSF53613 12 305 1.87E-58 T 13-10-2018 IPR029056 Ribokinase-like VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 SUPERFAMILY SSF52374 340 471 1.3E-23 T 13-10-2018 VAA_03751 d2dc415980e33503b8aac15dd4c15e40 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 8.0E-127 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VAA_01957 7cf974f535089c2976e07161ccdf55d2 234 Gene3D G3DSA:3.30.450.40 43 219 4.4E-36 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_01957 7cf974f535089c2976e07161ccdf55d2 234 Pfam PF04340 Protein of unknown function, DUF484 6 222 2.2E-72 T 13-10-2018 IPR007435 Protein of unknown function DUF484 VAA_01972 a9e45dfd6141731dfea58cdd1bbd632b 207 Pfam PF07947 YhhN family 26 205 7.1E-35 T 13-10-2018 IPR012506 YhhN-like GO:0016021 VAA_03735 d6d942d1b335119c19f6a7d315b4c0c1 421 PIRSF PIRSF038885 1 421 1.0E-152 T 13-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VAA_03735 d6d942d1b335119c19f6a7d315b4c0c1 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 6.7E-66 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VAA_03735 d6d942d1b335119c19f6a7d315b4c0c1 421 SUPERFAMILY SSF81648 297 412 3.71E-33 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VAA_03735 d6d942d1b335119c19f6a7d315b4c0c1 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 9.8E-40 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VAA_03735 d6d942d1b335119c19f6a7d315b4c0c1 421 Gene3D G3DSA:1.20.810.10 1 421 3.0E-150 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VAA_03735 d6d942d1b335119c19f6a7d315b4c0c1 421 SUPERFAMILY SSF81342 6 296 2.04E-92 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 SUPERFAMILY SSF55545 126 257 3.66E-26 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 SUPERFAMILY SSF51445 258 618 6.59E-127 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 138 255 3.4E-18 T 13-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 4.0E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PIRSF PIRSF001093 111 189 93.0 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 PIRSF PIRSF001093 189 636 6.8E-89 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 2.3E-119 T 13-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 Gene3D G3DSA:3.20.20.80 256 634 4.2E-137 T 13-10-2018 VAA_00773 8b88bb429b6aaf19a6cfc6730ba33422 637 Gene3D G3DSA:3.30.379.10 131 254 3.2E-24 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 Pfam PF04851 Type III restriction enzyme, res subunit 36 160 1.6E-7 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 Pfam PF13307 Helicase C-terminal domain 387 467 5.4E-7 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 SMART SM00487 32 216 0.0036 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 Gene3D G3DSA:3.40.50.300 30 202 6.0E-14 T 13-10-2018 VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 SUPERFAMILY SSF52540 21 165 5.32E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 Gene3D G3DSA:3.40.50.300 324 499 4.5E-9 T 13-10-2018 VAA_01783 910a6db2c80d0bf10ac220ef18bc91cd 621 SMART SM00491 349 471 1.6E-4 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VAA_02469 d0a76300c282f3b97dcf5a376e7a141a 422 Gene3D G3DSA:3.40.50.2000 216 406 1.9E-56 T 13-10-2018 VAA_02469 d0a76300c282f3b97dcf5a376e7a141a 422 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 4.7E-63 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VAA_02469 d0a76300c282f3b97dcf5a376e7a141a 422 Gene3D G3DSA:3.40.50.11720 34 210 3.5E-49 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VAA_02469 d0a76300c282f3b97dcf5a376e7a141a 422 SUPERFAMILY SSF53756 55 406 2.2E-15 T 13-10-2018 VAA_03083 d822fe8eeddd1a3810d9ddf241c00ef4 266 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 266 45.786 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VAA_03083 d822fe8eeddd1a3810d9ddf241c00ef4 266 Pfam PF02654 Cobalamin-5-phosphate synthase 15 249 1.5E-50 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VAA_03083 d822fe8eeddd1a3810d9ddf241c00ef4 266 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 10 249 6.6E-34 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VAA_02214 559e5189d7d53c2c6d618d4c19738c90 197 SUPERFAMILY SSF159894 3 103 6.02E-24 T 13-10-2018 VAA_02214 559e5189d7d53c2c6d618d4c19738c90 197 Gene3D G3DSA:1.10.150.20 113 196 1.8E-17 T 13-10-2018 VAA_02214 559e5189d7d53c2c6d618d4c19738c90 197 Pfam PF04993 TfoX N-terminal domain 13 100 3.2E-22 T 13-10-2018 IPR007076 TfoX, N-terminal VAA_02214 559e5189d7d53c2c6d618d4c19738c90 197 PIRSF PIRSF028788 10 197 2.4E-37 T 13-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VAA_02214 559e5189d7d53c2c6d618d4c19738c90 197 Pfam PF04994 TfoX C-terminal domain 114 192 3.4E-27 T 13-10-2018 IPR007077 TfoX, C-terminal VAA_02214 559e5189d7d53c2c6d618d4c19738c90 197 Gene3D G3DSA:3.30.1460.30 3 102 2.0E-16 T 13-10-2018 VAA_01713 08117ad35c2a651f54b81e9345558b72 277 SUPERFAMILY SSF56317 3 263 1.07E-78 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAA_01713 08117ad35c2a651f54b81e9345558b72 277 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VAA_01713 08117ad35c2a651f54b81e9345558b72 277 Gene3D G3DSA:3.60.110.10 1 269 4.6E-89 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VAA_01713 08117ad35c2a651f54b81e9345558b72 277 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 2.7E-54 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 Gene3D G3DSA:3.30.70.2120 174 275 3.5E-76 T 13-10-2018 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.9E-25 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.3E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 SUPERFAMILY SSF64518 1 376 1.27E-94 T 13-10-2018 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 Gene3D G3DSA:1.20.1330.10 44 327 3.5E-76 T 13-10-2018 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 Gene3D G3DSA:1.10.8.410 328 376 5.5E-21 T 13-10-2018 VAA_03469 eddffe1cdd89c10c94c77b30f179c482 377 Pfam PF07196 Flagellin hook IN motif 195 248 7.1E-12 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 7.6E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 Gene3D G3DSA:3.40.50.2300 1 122 9.8E-37 T 13-10-2018 VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 SUPERFAMILY SSF46894 119 217 3.97E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 Gene3D G3DSA:1.10.10.10 123 219 3.8E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 Pfam PF00072 Response regulator receiver domain 3 113 9.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 SUPERFAMILY SSF52172 1 133 9.53E-37 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 SMART SM00862 145 216 3.7E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_02002 cb8bdbd28f95754ca70fed1d5b2f1926 219 SMART SM00448 1 112 1.8E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03179 6d490a41fac11728c06756687416aa65 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 3.9E-24 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_03179 6d490a41fac11728c06756687416aa65 225 Gene3D G3DSA:1.10.3720.10 1 218 5.3E-51 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03179 6d490a41fac11728c06756687416aa65 225 SUPERFAMILY SSF161098 12 203 5.76E-43 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03179 6d490a41fac11728c06756687416aa65 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 1.6E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 549 565 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 Gene3D G3DSA:3.40.50.2300 370 475 5.0E-34 T 13-10-2018 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 644 1.8E-32 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 SUPERFAMILY SSF52794 382 471 2.22E-23 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 SUPERFAMILY SSF55804 505 645 4.45E-39 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 Gene3D G3DSA:3.40.930.10 501 646 7.8E-48 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 385 465 4.3E-9 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 Pfam PF02378 Phosphotransferase system, EIIC 18 278 9.6E-18 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_02789 931a609bb98bf3e4a598dedae5f0a9f3 649 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 6.6E-167 T 13-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 Pfam PF00155 Aminotransferase class I and II 29 394 8.6E-81 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 PRINTS PR00799 Aspartate aminotransferase signature 209 221 1.8E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 PRINTS PR00799 Aspartate aminotransferase signature 178 197 1.8E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 PRINTS PR00799 Aspartate aminotransferase signature 344 362 1.8E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.8E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 Gene3D G3DSA:3.40.640.10 48 318 1.5E-157 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 Gene3D G3DSA:3.90.1150.10 14 392 1.5E-157 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01409 9cd8fd53de16eb8160fb1a0c6899a1a3 399 SUPERFAMILY SSF53383 1 398 1.28E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_03729 fe96479a8e0ea6e3497c3b4daf6510d3 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 2.8E-33 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 VAA_03729 fe96479a8e0ea6e3497c3b4daf6510d3 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 1.5E-25 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 VAA_03729 fe96479a8e0ea6e3497c3b4daf6510d3 122 SUPERFAMILY SSF52980 8 108 1.39E-21 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_03729 fe96479a8e0ea6e3497c3b4daf6510d3 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 22.015 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 VAA_03729 fe96479a8e0ea6e3497c3b4daf6510d3 122 Gene3D G3DSA:3.40.1350.10 13 122 3.6E-29 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VAA_03236 41106db7c69b99b59b3e683ada541076 218 Pfam PF02810 SEC-C motif 200 218 1.3E-9 T 13-10-2018 IPR004027 SEC-C motif VAA_03236 41106db7c69b99b59b3e683ada541076 218 Pfam PF03695 Uncharacterised protein family (UPF0149) 29 173 1.2E-5 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAA_03236 41106db7c69b99b59b3e683ada541076 218 Gene3D G3DSA:3.10.450.50 137 218 1.0E-9 T 13-10-2018 VAA_03236 41106db7c69b99b59b3e683ada541076 218 SUPERFAMILY SSF103642 198 217 1.8E-7 T 13-10-2018 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 PIRSF PIRSF001237 1 342 1.8E-141 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.92 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 Pfam PF01979 Amidohydrolase family 11 305 4.1E-17 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 Gene3D G3DSA:3.20.20.140 2 342 3.2E-110 T 13-10-2018 VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 SUPERFAMILY SSF51556 1 341 1.36E-146 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_00972 e985804c3ffd5cd1d2579352220a7e5e 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.1E-139 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 SUPERFAMILY SSF54862 107 335 1.67E-30 T 13-10-2018 VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 Pfam PF13746 4Fe-4S dicluster domain 222 326 9.3E-42 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 470 5.3E-172 T 13-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 Gene3D G3DSA:2.60.40.10 357 472 2.1E-44 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 Pfam PF12801 4Fe-4S binding domain 97 136 1.1E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_01779 039171b95930b6cedd6aa640d09eacd5 472 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 469 1.7E-29 T 13-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VAA_00922 b38a28a819f882fbcb215a78b1c4f226 308 Pfam PF01882 Protein of unknown function DUF58 52 136 2.8E-22 T 13-10-2018 IPR002881 Domain of unknown function DUF58 VAA_02603 a0dc5da1f7b2c259448670db8182ad31 157 PRINTS PR01837 MgtC/SapB protein signature 21 40 7.9E-32 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VAA_02603 a0dc5da1f7b2c259448670db8182ad31 157 PRINTS PR01837 MgtC/SapB protein signature 67 89 7.9E-32 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VAA_02603 a0dc5da1f7b2c259448670db8182ad31 157 PRINTS PR01837 MgtC/SapB protein signature 94 118 7.9E-32 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VAA_02603 a0dc5da1f7b2c259448670db8182ad31 157 PRINTS PR01837 MgtC/SapB protein signature 40 58 7.9E-32 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VAA_02603 a0dc5da1f7b2c259448670db8182ad31 157 Pfam PF02308 MgtC family 18 140 8.5E-30 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VAA_02963 603feabd775579eb9a67bd5672e6ddde 476 SUPERFAMILY SSF56954 27 450 1.31E-48 T 13-10-2018 VAA_02963 603feabd775579eb9a67bd5672e6ddde 476 Gene3D G3DSA:1.20.1600.10 44 449 6.8E-39 T 13-10-2018 VAA_02963 603feabd775579eb9a67bd5672e6ddde 476 Pfam PF02321 Outer membrane efflux protein 273 448 3.0E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_02963 603feabd775579eb9a67bd5672e6ddde 476 Pfam PF02321 Outer membrane efflux protein 50 232 1.0E-7 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 Gene3D G3DSA:2.40.50.230 363 462 8.5E-40 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 SUPERFAMILY SSF69279 6 192 1.25E-48 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 SUPERFAMILY SSF69279 194 371 6.12E-44 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 Gene3D G3DSA:2.30.110.50 13 337 9.1E-83 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 SUPERFAMILY SSF69255 370 457 1.07E-32 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 Gene3D G3DSA:3.30.1920.30 229 292 9.1E-83 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 43 509 8.2E-131 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 Gene3D G3DSA:3.55.50.10 105 196 9.1E-83 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 527 1.6E-186 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 Pfam PF05954 Phage late control gene D protein (GPD) 42 335 1.6E-74 T 13-10-2018 VAA_00297 852563a59551290dfe5d2a02668c1dd3 698 SUPERFAMILY SSF69349 448 629 7.85E-47 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 SUPERFAMILY SSF53850 35 239 6.73E-22 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 SMART SM00267 514 675 2.4E-20 T 13-10-2018 IPR000160 GGDEF domain VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Gene3D G3DSA:3.40.190.10 274 474 8.1E-24 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Gene3D G3DSA:3.30.70.270 520 682 1.0E-33 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Gene3D G3DSA:3.40.190.10 349 447 8.1E-24 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 SMART SM00062 262 483 0.0036 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 SMART SM00062 42 243 2.4E-7 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 526 670 9.0E-28 T 13-10-2018 IPR000160 GGDEF domain VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 275 458 5.2E-21 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Gene3D G3DSA:3.40.190.10 57 229 1.4E-19 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 SUPERFAMILY SSF53850 275 480 4.8E-24 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Gene3D G3DSA:3.40.190.10 115 200 1.4E-19 T 13-10-2018 VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 239 5.1E-19 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 SUPERFAMILY SSF55073 530 671 5.18E-30 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_03301 59450c3591b87ef9679ff4fd180d312c 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 521 671 7.1E-29 T 13-10-2018 IPR000160 GGDEF domain VAA_03305 054e433c3ef797d05dea5bde594ee16b 286 SUPERFAMILY SSF54637 6 114 1.97E-40 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03305 054e433c3ef797d05dea5bde594ee16b 286 Pfam PF13622 Thioesterase-like superfamily 33 282 6.0E-61 T 13-10-2018 VAA_03305 054e433c3ef797d05dea5bde594ee16b 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 5.2E-95 T 13-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VAA_03305 054e433c3ef797d05dea5bde594ee16b 286 SUPERFAMILY SSF54637 116 283 5.9E-57 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03305 054e433c3ef797d05dea5bde594ee16b 286 Gene3D G3DSA:3.10.129.90 2 286 2.7E-107 T 13-10-2018 VAA_00978 8f975195bc9aabfec4351c5915bb06bd 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 97 196 1.8E-7 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAA_00978 8f975195bc9aabfec4351c5915bb06bd 322 SUPERFAMILY SSF53187 55 310 2.78E-37 T 13-10-2018 VAA_00978 8f975195bc9aabfec4351c5915bb06bd 322 Gene3D G3DSA:3.40.630.10 23 322 6.8E-116 T 13-10-2018 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 19 79 15.287 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 Pfam PF02609 Exonuclease VII small subunit 20 70 3.1E-18 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 Gene3D G3DSA:1.10.287.1040 13 86 2.6E-22 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 19 73 1.1E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 59 6.0E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 SUPERFAMILY SSF116842 11 81 3.53E-20 T 13-10-2018 VAA_01164 da9cfc8477ff47227324d9b2b0104c0a 89 PIRSF PIRSF006488 7 87 1.7E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Pfam PF03129 Anticodon binding domain 475 568 3.3E-23 T 13-10-2018 IPR004154 Anticodon-binding VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 SUPERFAMILY SSF52954 463 570 5.56E-33 T 13-10-2018 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.204 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 SUPERFAMILY SSF55681 10 478 1.17E-97 T 13-10-2018 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Gene3D G3DSA:3.40.50.800 4 554 1.1E-236 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 PIRSF PIRSF001535 1 571 1.6E-267 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Gene3D G3DSA:3.90.960.10 240 389 1.1E-236 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 8.5E-42 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Gene3D G3DSA:3.30.930.10 11 465 1.1E-236 T 13-10-2018 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 SUPERFAMILY SSF55826 218 390 2.62E-31 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 8.0E-247 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 4.8E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAA_01176 77a5c7068f5c4f8ba75dd8831f90f633 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 SMART SM00283 255 430 5.6E-21 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 Pfam PF08447 PAS fold 31 114 2.8E-18 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 Gene3D G3DSA:3.30.450.20 2 116 1.5E-21 T 13-10-2018 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 420 2.4E-35 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 Gene3D G3DSA:1.10.287.950 189 428 4.5E-55 T 13-10-2018 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 269 298 2.3E-6 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 2.3E-6 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 2.8E-11 T 13-10-2018 IPR000014 PAS domain VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 SUPERFAMILY SSF55785 22 114 2.79E-24 T 13-10-2018 IPR035965 PAS domain superfamily VAA_01333 664a7792c2b2b755f1b6cda0dc456301 430 SUPERFAMILY SSF58104 222 423 1.66E-55 T 13-10-2018 VAA_02928 d2e8770528c74cb2afb363bb3236c15c 385 Gene3D G3DSA:2.40.37.30 8 382 2.8E-143 T 13-10-2018 VAA_02928 d2e8770528c74cb2afb363bb3236c15c 385 Pfam PF01168 Alanine racemase, N-terminal domain 33 266 4.0E-21 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VAA_02928 d2e8770528c74cb2afb363bb3236c15c 385 SUPERFAMILY SSF51419 34 270 1.6E-24 T 13-10-2018 IPR029066 PLP-binding barrel VAA_02928 d2e8770528c74cb2afb363bb3236c15c 385 Gene3D G3DSA:3.20.20.10 100 253 2.8E-143 T 13-10-2018 IPR029066 PLP-binding barrel VAA_03542 11237aa317cd75bf49b7478a98030893 214 Gene3D G3DSA:3.40.50.2020 7 214 1.3E-72 T 13-10-2018 VAA_03542 11237aa317cd75bf49b7478a98030893 214 Pfam PF14681 Uracil phosphoribosyltransferase 13 213 3.5E-64 T 13-10-2018 VAA_03542 11237aa317cd75bf49b7478a98030893 214 SUPERFAMILY SSF53271 9 212 1.66E-66 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_03542 11237aa317cd75bf49b7478a98030893 214 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 8 214 4.2E-91 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VAA_03542 11237aa317cd75bf49b7478a98030893 214 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 8 214 44.451 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 Gene3D G3DSA:3.30.450.330 239 563 3.4E-102 T 13-10-2018 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 224 1.9E-17 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 264 559 1.9E-75 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 SUPERFAMILY SSF56601 190 569 1.21E-89 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 Gene3D G3DSA:3.40.710.10 299 481 3.4E-102 T 13-10-2018 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 22 574 44.536 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 SUPERFAMILY SSF56519 66 237 2.88E-43 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VAA_03722 50c01c9310bf624826a8bee0abd002c2 576 Gene3D G3DSA:3.90.1310.30 62 237 1.3E-43 T 13-10-2018 VAA_03612 ef668ba3e8ed7693cd74de44bb8caa7a 198 PIRSF PIRSF006102 1 198 1.0E-66 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_03612 ef668ba3e8ed7693cd74de44bb8caa7a 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.4E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_03612 ef668ba3e8ed7693cd74de44bb8caa7a 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 3.0E-106 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VAA_03612 ef668ba3e8ed7693cd74de44bb8caa7a 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.882 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VAA_00711 9b37d184b169a8d8c4f39cbf1f6d7123 376 PIRSF PIRSF015658 1 376 3.0E-180 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAA_00711 9b37d184b169a8d8c4f39cbf1f6d7123 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.7E-161 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAA_00711 9b37d184b169a8d8c4f39cbf1f6d7123 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.3E-173 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 Pfam PF03925 SeqA protein C-terminal domain 72 179 1.1E-45 T 13-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.3E-24 T 13-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 SUPERFAMILY SSF82808 67 180 9.68E-48 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 181 42.282 T 13-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 SUPERFAMILY SSF47598 1 34 6.23E-14 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 PIRSF PIRSF019401 1 181 1.2E-55 T 13-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 Gene3D G3DSA:1.10.1220.10 1 40 1.9E-24 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAA_03421 415a656e1217f3be6fa3bd0be2399e39 181 Gene3D G3DSA:1.20.1380.10 66 181 1.5E-47 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VAA_01165 66fbaf7c3cd92630d596050dec9cf55b 294 Gene3D G3DSA:1.10.600.10 1 294 7.1E-110 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAA_01165 66fbaf7c3cd92630d596050dec9cf55b 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAA_01165 66fbaf7c3cd92630d596050dec9cf55b 294 Pfam PF00348 Polyprenyl synthetase 30 270 3.0E-57 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VAA_01165 66fbaf7c3cd92630d596050dec9cf55b 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VAA_01165 66fbaf7c3cd92630d596050dec9cf55b 294 SUPERFAMILY SSF48576 4 288 1.06E-84 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 31.611 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 282 8.6E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 6.4E-13 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 6.4E-13 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 6.4E-13 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 6.4E-13 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 Pfam PF00303 Thymidylate synthase 2 283 7.8E-73 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 Gene3D G3DSA:3.30.572.10 1 283 5.3E-78 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00403 cf18c5963cfbf7b11853a13a0a3231b9 283 SUPERFAMILY SSF55831 2 283 7.46E-88 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 Gene3D G3DSA:2.40.280.10 7 136 9.3E-45 T 13-10-2018 IPR023620 Small protein B VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 SUPERFAMILY SSF74982 9 139 6.28E-49 T 13-10-2018 IPR023620 Small protein B VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-57 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 5.6E-54 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 Pfam PF01668 SmpB protein 15 157 9.2E-57 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAA_01207 52837ccbbcf256934a5ca7fea76e9aba 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 70.096 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VAA_02206 8191daf021c5c09f46ed50a80827e919 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 369 9.1E-152 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VAA_02206 8191daf021c5c09f46ed50a80827e919 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 370 40.192 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VAA_02206 8191daf021c5c09f46ed50a80827e919 373 SUPERFAMILY SSF52402 9 251 1.52E-58 T 13-10-2018 VAA_02206 8191daf021c5c09f46ed50a80827e919 373 Gene3D G3DSA:2.30.30.280 220 289 1.1E-25 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VAA_02206 8191daf021c5c09f46ed50a80827e919 373 Gene3D G3DSA:2.40.30.10 291 373 2.3E-33 T 13-10-2018 VAA_02206 8191daf021c5c09f46ed50a80827e919 373 Gene3D G3DSA:3.40.50.620 1 219 2.5E-96 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02206 8191daf021c5c09f46ed50a80827e919 373 Pfam PF03054 tRNA methyl transferase 11 369 1.0E-142 T 13-10-2018 VAA_00456 756655cee95c1fab713e7736dcd9c1cb 184 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.752 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VAA_00456 756655cee95c1fab713e7736dcd9c1cb 184 Pfam PF04345 Chorismate lyase 16 183 1.7E-55 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VAA_00456 756655cee95c1fab713e7736dcd9c1cb 184 Gene3D G3DSA:3.40.1410.10 13 178 1.5E-40 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_00456 756655cee95c1fab713e7736dcd9c1cb 184 SUPERFAMILY SSF64288 13 178 1.2E-45 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 Pfam PF03466 LysR substrate binding domain 134 318 1.3E-20 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 SUPERFAMILY SSF46785 32 109 4.28E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 Gene3D G3DSA:1.10.10.10 24 114 7.7E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 71 82 1.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 71 1.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 Gene3D G3DSA:3.40.190.10 118 317 2.8E-38 T 13-10-2018 VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 SUPERFAMILY SSF53850 116 319 7.96E-38 T 13-10-2018 VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 Gene3D G3DSA:3.40.190.10 197 293 2.8E-38 T 13-10-2018 VAA_03798 1fc11b896dea812bf3830c3f1b9b470c 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 35 94 1.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00334 ac616b94470135c110a39c842be6129f 181 SUPERFAMILY SSF53098 3 179 3.92E-49 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00334 ac616b94470135c110a39c842be6129f 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.122 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 VAA_00334 ac616b94470135c110a39c842be6129f 181 SMART SM00479 7 180 4.4E-22 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_00334 ac616b94470135c110a39c842be6129f 181 Gene3D G3DSA:3.30.420.10 1 181 1.0E-73 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_00334 ac616b94470135c110a39c842be6129f 181 Pfam PF00929 Exonuclease 9 170 8.7E-36 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01759 375fe634a89c291c342558e855f0607e 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.512 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 Pfam PF01218 Coproporphyrinogen III oxidase 9 304 2.1E-129 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PIRSF PIRSF000166 2 304 2.9E-127 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PRINTS PR00073 Coprogen oxidase signature 166 195 1.7E-67 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PRINTS PR00073 Coprogen oxidase signature 31 47 1.7E-67 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PRINTS PR00073 Coprogen oxidase signature 266 292 1.7E-67 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PRINTS PR00073 Coprogen oxidase signature 238 265 1.7E-67 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PRINTS PR00073 Coprogen oxidase signature 129 151 1.7E-67 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 PRINTS PR00073 Coprogen oxidase signature 94 118 1.7E-67 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 SUPERFAMILY SSF102886 5 304 2.09E-133 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 Gene3D G3DSA:3.40.1500.10 1 304 1.2E-133 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_01759 375fe634a89c291c342558e855f0607e 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VAA_03040 b9260d92716a45747907290422c675cf 477 Pfam PF06812 ImpA, N-terminal, type VI secretion system 27 172 4.6E-20 T 13-10-2018 IPR010657 ImpA, N-terminal VAA_01839 ff56d92e89ebe2b09f3b40c9c90ab406 310 Pfam PF01171 PP-loop family 43 204 2.3E-15 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VAA_01839 ff56d92e89ebe2b09f3b40c9c90ab406 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.663 T 13-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VAA_01839 ff56d92e89ebe2b09f3b40c9c90ab406 310 SUPERFAMILY SSF52402 18 237 9.48E-57 T 13-10-2018 VAA_01839 ff56d92e89ebe2b09f3b40c9c90ab406 310 Gene3D G3DSA:3.40.50.620 2 265 4.1E-51 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_01839 ff56d92e89ebe2b09f3b40c9c90ab406 310 PIRSF PIRSF004976 1 272 3.2E-76 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VAA_01651 aa033b87d5488212d0cb0f6917925621 243 SUPERFAMILY SSF88697 2 70 1.17E-18 T 13-10-2018 IPR015947 PUA-like superfamily VAA_01651 aa033b87d5488212d0cb0f6917925621 243 SUPERFAMILY SSF75217 75 242 1.88E-52 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_01651 aa033b87d5488212d0cb0f6917925621 243 Gene3D G3DSA:2.40.240.20 1 70 1.6E-23 T 13-10-2018 VAA_01651 aa033b87d5488212d0cb0f6917925621 243 Gene3D G3DSA:3.40.1280.10 74 243 1.0E-65 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_01651 aa033b87d5488212d0cb0f6917925621 243 PIRSF PIRSF015601 2 242 7.4E-57 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VAA_01651 aa033b87d5488212d0cb0f6917925621 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 3.0E-87 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VAA_01651 aa033b87d5488212d0cb0f6917925621 243 Pfam PF04452 RNA methyltransferase 19 236 5.4E-75 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 SUPERFAMILY SSF53218 6 168 1.83E-46 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 2.4E-34 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 Gene3D G3DSA:3.40.980.10 2 170 3.4E-51 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 PIRSF PIRSF006443 1 166 2.9E-65 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 2.3E-36 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 SMART SM00852 14 158 2.6E-28 T 13-10-2018 IPR001453 MoaB/Mog domain VAA_02381 e3fa3a6fa52cb6acf301b60cea1aa020 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 168 4.4E-84 T 13-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VAA_02396 6e7c85280a27c50b721a89ffd0c15639 437 Pfam PF05977 Transmembrane secretion effector 16 394 2.1E-29 T 13-10-2018 IPR010290 Transmembrane secretion effector VAA_02396 6e7c85280a27c50b721a89ffd0c15639 437 Gene3D G3DSA:1.20.1250.20 14 403 1.2E-37 T 13-10-2018 VAA_02396 6e7c85280a27c50b721a89ffd0c15639 437 SUPERFAMILY SSF103473 15 405 1.57E-42 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 36 58 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 4.9E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 PIRSF PIRSF000724 4 392 4.8E-133 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 Gene3D G3DSA:3.40.50.1260 170 378 5.9E-150 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 Pfam PF00162 Phosphoglycerate kinase 11 378 1.0E-137 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 13 388 38.155 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 SUPERFAMILY SSF53748 8 387 3.77E-143 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_00185 c79906c88691ee881febca4690a350d5 392 Gene3D G3DSA:3.40.50.1260 15 384 5.9E-150 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_01362 9699d359c29adc63987c03f516c1b06d 33 Pfam PF08173 Membrane bound YbgT-like protein 1 26 6.8E-16 T 13-10-2018 IPR012994 Membrane bound YbgT-like VAA_01362 9699d359c29adc63987c03f516c1b06d 33 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 28 3.5E-18 T 13-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VAA_02478 35a98f53498420243f7b0081de3bea03 295 Gene3D G3DSA:3.90.25.10 161 287 1.5E-108 T 13-10-2018 VAA_02478 35a98f53498420243f7b0081de3bea03 295 Gene3D G3DSA:3.40.50.720 4 280 1.5E-108 T 13-10-2018 VAA_02478 35a98f53498420243f7b0081de3bea03 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 291 1.5E-104 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VAA_02478 35a98f53498420243f7b0081de3bea03 295 SUPERFAMILY SSF51735 2 292 7.1E-104 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02478 35a98f53498420243f7b0081de3bea03 295 Pfam PF04321 RmlD substrate binding domain 2 291 4.6E-110 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 SUPERFAMILY SSF50156 385 452 3.81E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 SUPERFAMILY SSF50494 38 264 1.24E-63 T 13-10-2018 IPR009003 Peptidase S1, PA clan VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 Gene3D G3DSA:2.30.42.10 266 362 5.1E-28 T 13-10-2018 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 8.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 8.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 8.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 8.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 8.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 8.5E-58 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 Pfam PF13365 Trypsin-like peptidase domain 93 229 4.6E-30 T 13-10-2018 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 Gene3D G3DSA:2.30.42.10 363 455 8.2E-26 T 13-10-2018 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 Gene3D G3DSA:2.40.10.120 38 262 8.2E-84 T 13-10-2018 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 453 7.6E-163 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 SMART SM00228 268 350 5.9E-17 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 SMART SM00228 371 447 7.3E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 374 444 9.8E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 SUPERFAMILY SSF50156 226 351 2.76E-26 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_03741 8f352ae68ec0dce8cadd74011662cfbc 455 Pfam PF13180 PDZ domain 269 359 1.5E-17 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_04300 d23161e8de65c88cf9a3a1026344231b 222 Gene3D G3DSA:1.20.1050.10 84 192 2.1E-87 T 13-10-2018 VAA_04300 d23161e8de65c88cf9a3a1026344231b 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 193 2.8E-12 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAA_04300 d23161e8de65c88cf9a3a1026344231b 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 2.6E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAA_04300 d23161e8de65c88cf9a3a1026344231b 222 SUPERFAMILY SSF47616 74 203 5.71E-39 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAA_04300 d23161e8de65c88cf9a3a1026344231b 222 SUPERFAMILY SSF52833 1 81 1.57E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_04300 d23161e8de65c88cf9a3a1026344231b 222 Gene3D G3DSA:3.40.30.10 2 202 2.1E-87 T 13-10-2018 VAA_02183 e772b618421901b6a1b6011b659d7cf1 238 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 216 1.5E-76 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VAA_02183 e772b618421901b6a1b6011b659d7cf1 238 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.3E-67 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VAA_02183 e772b618421901b6a1b6011b659d7cf1 238 SUPERFAMILY SSF55729 4 232 6.36E-86 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02183 e772b618421901b6a1b6011b659d7cf1 238 Gene3D G3DSA:2.30.210.20 4 63 4.6E-25 T 13-10-2018 VAA_02183 e772b618421901b6a1b6011b659d7cf1 238 Gene3D G3DSA:3.40.630.70 64 238 3.2E-61 T 13-10-2018 VAA_02183 e772b618421901b6a1b6011b659d7cf1 238 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 238 87.944 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.81 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 316 3.3E-120 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 6.8E-150 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 PIRSF PIRSF000382 2 763 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 SUPERFAMILY SSF51726 396 758 2.35E-112 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAA_02261 d03c78f25ce4643ddb658e5c648aef49 764 SUPERFAMILY SSF51726 5 393 1.2E-107 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VAA_01637 6fa4a1e97a0eef478453907366804a5a 263 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 123 4.7E-28 T 13-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VAA_01637 6fa4a1e97a0eef478453907366804a5a 263 Pfam PF04954 Siderophore-interacting protein 132 245 5.6E-30 T 13-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VAA_01637 6fa4a1e97a0eef478453907366804a5a 263 Gene3D G3DSA:2.40.30.10 2 124 1.0E-27 T 13-10-2018 VAA_01637 6fa4a1e97a0eef478453907366804a5a 263 SUPERFAMILY SSF63380 9 122 6.63E-12 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_01637 6fa4a1e97a0eef478453907366804a5a 263 Gene3D G3DSA:3.40.50.80 127 263 9.7E-42 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_00103 47f70716f55a7d9c75aab040a16391b9 143 Gene3D G3DSA:1.20.5.780 54 140 5.1E-16 T 13-10-2018 VAA_00103 47f70716f55a7d9c75aab040a16391b9 143 SUPERFAMILY SSF47598 56 134 1.22E-15 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAA_00103 47f70716f55a7d9c75aab040a16391b9 143 Pfam PF08681 Protein of unknown function (DUF1778) 59 135 5.3E-21 T 13-10-2018 IPR014795 Vibrio phage ICP1, Orf50 VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 SUPERFAMILY SSF52788 3 146 1.44E-41 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 Gene3D G3DSA:3.40.50.2300 1 146 1.3E-51 T 13-10-2018 VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 SMART SM00226 3 145 6.0E-53 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 4.2E-38 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 2.9E-26 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.9E-26 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.9E-26 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 2.9E-26 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_02513 602740c85eaa1b6a7e12d4f0dc191663 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 2.9E-26 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_03267 6e4704646bad5101f9d8f748deed3b46 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 36 189 8.1E-9 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VAA_03267 6e4704646bad5101f9d8f748deed3b46 203 SUPERFAMILY SSF89392 24 189 8.24E-18 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VAA_03267 6e4704646bad5101f9d8f748deed3b46 203 Gene3D G3DSA:2.50.20.10 23 203 4.8E-23 T 13-10-2018 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 PRINTS PR00607 Class IE cytochrome C signature 117 129 1.2E-15 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 PRINTS PR00607 Class IE cytochrome C signature 89 99 1.2E-15 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 PRINTS PR00607 Class IE cytochrome C signature 132 143 1.2E-15 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 PRINTS PR00607 Class IE cytochrome C signature 78 89 1.2E-15 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 SUPERFAMILY SSF46626 69 142 6.56E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 68 142 1.5E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_00592 0486c1d1b393add7f4b84ff5ebcd0d11 146 Gene3D G3DSA:1.10.760.10 68 145 1.5E-32 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.5E-41 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 Pfam PF00281 Ribosomal protein L5 24 80 7.6E-29 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 Gene3D G3DSA:3.30.1440.10 1 179 8.6E-81 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 PIRSF PIRSF002161 1 179 3.4E-66 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 SUPERFAMILY SSF55282 4 179 1.39E-78 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.969 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02682 c9b33d9f4ece64d65136a5cbb97a0a28 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_03697 14e2e93b95b75a4c0953531eff1152d2 231 Pfam PF01048 Phosphorylase superfamily 2 227 5.0E-48 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAA_03697 14e2e93b95b75a4c0953531eff1152d2 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 2.1E-99 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_03697 14e2e93b95b75a4c0953531eff1152d2 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.587 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_03697 14e2e93b95b75a4c0953531eff1152d2 231 SUPERFAMILY SSF53167 1 230 6.68E-72 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAA_03697 14e2e93b95b75a4c0953531eff1152d2 231 Gene3D G3DSA:3.40.50.1580 1 231 1.4E-70 T 13-10-2018 VAA_03665 7945d6d6973e3b4d24bd7a59ceece425 781 Gene3D G3DSA:2.40.10.220 465 587 4.6E-6 T 13-10-2018 VAA_03665 7945d6d6973e3b4d24bd7a59ceece425 781 Pfam PF07238 PilZ domain 144 232 2.3E-6 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VAA_03665 7945d6d6973e3b4d24bd7a59ceece425 781 Pfam PF07238 PilZ domain 469 553 1.2E-9 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VAA_03665 7945d6d6973e3b4d24bd7a59ceece425 781 SUPERFAMILY SSF141371 465 525 1.39E-6 T 13-10-2018 VAA_03025 c269882a85b3062147335ce75d55a7ac 155 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 135 8.3E-31 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VAA_03025 c269882a85b3062147335ce75d55a7ac 155 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 7 142 7.6E-31 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VAA_03025 c269882a85b3062147335ce75d55a7ac 155 Gene3D G3DSA:2.60.40.4150 26 152 6.3E-27 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VAA_00621 ae0705efc4528286678dbb16d720890a 696 Gene3D G3DSA:3.40.50.300 460 633 7.5E-53 T 13-10-2018 VAA_00621 ae0705efc4528286678dbb16d720890a 696 Pfam PF17191 RecG wedge domain 17 175 2.1E-20 T 13-10-2018 IPR033454 RecG, wedge domain VAA_00621 ae0705efc4528286678dbb16d720890a 696 SMART SM00487 268 462 9.9E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00621 ae0705efc4528286678dbb16d720890a 696 Pfam PF00270 DEAD/DEAH box helicase 294 436 9.8E-18 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_00621 ae0705efc4528286678dbb16d720890a 696 SUPERFAMILY SSF50249 12 177 7.2E-41 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00621 ae0705efc4528286678dbb16d720890a 696 Gene3D G3DSA:2.40.50.140 50 143 2.2E-13 T 13-10-2018 VAA_00621 ae0705efc4528286678dbb16d720890a 696 SMART SM00490 509 592 1.3E-21 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00621 ae0705efc4528286678dbb16d720890a 696 SUPERFAMILY SSF52540 295 656 1.34E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00621 ae0705efc4528286678dbb16d720890a 696 Gene3D G3DSA:3.40.50.300 212 453 5.0E-81 T 13-10-2018 VAA_00621 ae0705efc4528286678dbb16d720890a 696 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 32 667 1.2E-234 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VAA_00621 ae0705efc4528286678dbb16d720890a 696 Pfam PF00271 Helicase conserved C-terminal domain 484 591 2.9E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00621 ae0705efc4528286678dbb16d720890a 696 SUPERFAMILY SSF52540 217 456 2.6E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 Gene3D G3DSA:3.40.630.30 308 456 1.6E-36 T 13-10-2018 VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 PIRSF PIRSF000423 9 456 5.2E-205 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 SUPERFAMILY SSF55729 311 435 9.92E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 Pfam PF00583 Acetyltransferase (GNAT) family 345 428 2.7E-7 T 13-10-2018 IPR000182 GNAT domain VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 Pfam PF00696 Amino acid kinase family 36 281 2.9E-30 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 Gene3D G3DSA:3.40.1160.10 18 307 2.5E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 19 456 3.9E-214 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 456 220.245 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VAA_03633 3972560ac9ec5f0e58a9761067f059ec 456 SUPERFAMILY SSF53633 14 305 4.47E-68 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_00687 a61b209a62e39fe9f9f3084ecf31f4be 163 SUPERFAMILY SSF55083 1 146 2.49E-36 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00687 a61b209a62e39fe9f9f3084ecf31f4be 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 4.8E-25 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00687 a61b209a62e39fe9f9f3084ecf31f4be 163 Gene3D G3DSA:3.30.70.560 2 153 1.7E-32 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00687 a61b209a62e39fe9f9f3084ecf31f4be 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 7.6E-29 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VAA_00921 58ea8b248465dde543937c85d11b2da6 318 PIRSF PIRSF002849 2 318 3.4E-128 T 13-10-2018 VAA_00921 58ea8b248465dde543937c85d11b2da6 318 SUPERFAMILY SSF52540 6 290 9.87E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00921 58ea8b248465dde543937c85d11b2da6 318 Gene3D G3DSA:1.10.8.300 199 315 2.1E-36 T 13-10-2018 VAA_00921 58ea8b248465dde543937c85d11b2da6 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 4.6E-63 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VAA_00921 58ea8b248465dde543937c85d11b2da6 318 Gene3D G3DSA:3.40.50.300 17 183 1.0E-46 T 13-10-2018 VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 Pfam PF14600 Cellulose-binding domain 354 406 1.7E-13 T 13-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 Gene3D G3DSA:2.60.40.10 245 344 1.5E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 Gene3D G3DSA:2.60.40.10 148 244 1.5E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 SUPERFAMILY SSF51055 356 406 7.85E-13 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 Gene3D G3DSA:2.10.10.20 353 406 1.9E-12 T 13-10-2018 VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 SMART SM00495 90 135 4.6 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 SMART SM00495 361 402 5.1E-5 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_00625 1b62bb95c8bbf4b3ad1e46df3276e402 1106 SMART SM00495 28 73 2.2 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_01441 322b5a7b61061e09788ae7ce8a15b72d 473 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 463 2.2E-79 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAA_01441 322b5a7b61061e09788ae7ce8a15b72d 473 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 463 2.4E-48 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAA_01441 322b5a7b61061e09788ae7ce8a15b72d 473 PIRSF PIRSF002457 2 473 2.2E-114 T 13-10-2018 IPR030676 Citrate carrier CitT-related VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 SUPERFAMILY SSF48008 98 235 3.14E-19 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 Gene3D G3DSA:1.20.120.530 97 236 6.7E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 Gene3D G3DSA:1.10.10.10 1 74 4.5E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 Pfam PF07729 FCD domain 99 226 9.0E-17 T 13-10-2018 IPR011711 GntR, C-terminal VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 SUPERFAMILY SSF46785 5 76 7.98E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 SMART SM00895 99 227 8.2E-18 T 13-10-2018 IPR011711 GntR, C-terminal VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.4E-25 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_00739 0ff0f05699b6a53019b53077279f7d4b 255 SMART SM00345 15 74 2.8E-27 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_01303 576216930e97ad66fa3a26bc5c8e05d0 173 SUPERFAMILY SSF55729 3 164 1.08E-40 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_01303 576216930e97ad66fa3a26bc5c8e05d0 173 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 2.9E-19 T 13-10-2018 IPR000182 GNAT domain VAA_01303 576216930e97ad66fa3a26bc5c8e05d0 173 Gene3D G3DSA:3.40.630.30 4 172 1.9E-51 T 13-10-2018 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 3.0E-154 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.6E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 Gene3D G3DSA:2.40.33.10 71 167 6.4E-164 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 Gene3D G3DSA:3.40.1380.20 339 371 6.4E-164 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 SUPERFAMILY SSF51621 1 339 1.64E-103 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 Gene3D G3DSA:3.20.20.60 3 338 6.4E-164 T 13-10-2018 VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 SUPERFAMILY SSF50800 70 167 3.14E-28 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VAA_00177 f945ac34c3833c0c8685f749c8b9f123 378 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 369 6.1E-164 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PIRSF PIRSF005419 10 697 6.2E-254 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 Gene3D G3DSA:1.10.490.80 598 695 6.2E-15 T 13-10-2018 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 Gene3D G3DSA:3.40.30.60 363 506 3.5E-53 T 13-10-2018 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 13-10-2018 IPR025505 FHIPEP conserved site VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.4E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.4E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.4E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.4E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.4E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.4E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 Gene3D G3DSA:1.10.8.540 507 594 2.2E-23 T 13-10-2018 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 7.6E-267 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VAA_03392 1096b9fd3a403c996ebca3f1a90bf82c 697 Pfam PF00771 FHIPEP family 32 687 1.5E-269 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 SUPERFAMILY SSF52943 2 288 5.79E-97 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.991 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 Gene3D G3DSA:3.40.1380.10 61 207 3.4E-111 T 13-10-2018 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 Gene3D G3DSA:1.10.287.80 6 284 3.4E-111 T 13-10-2018 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.5E-111 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 5.9E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 5.9E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 5.9E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 5.9E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00826 66d9405b7d2ce2364a1e069a12eb0474 288 Pfam PF00231 ATP synthase 5 287 2.7E-98 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_03659 03b73214262cdb92aedab474344e6a68 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_03659 03b73214262cdb92aedab474344e6a68 562 Gene3D G3DSA:3.40.50.12780 16 437 4.7E-85 T 13-10-2018 VAA_03659 03b73214262cdb92aedab474344e6a68 562 SUPERFAMILY SSF56801 18 548 1.01E-111 T 13-10-2018 VAA_03659 03b73214262cdb92aedab474344e6a68 562 Pfam PF00501 AMP-binding enzyme 24 441 3.7E-88 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_03520 10096248f0d5b8f4cb87dd3a87cc1314 353 Pfam PF07559 Flagellar basal body protein FlaE 181 314 7.0E-22 T 13-10-2018 IPR011491 Flagellar hook protein FlgE VAA_03520 10096248f0d5b8f4cb87dd3a87cc1314 353 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 330 5.9E-56 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAA_03520 10096248f0d5b8f4cb87dd3a87cc1314 353 Pfam PF00460 Flagella basal body rod protein 3 32 8.3E-10 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAA_03520 10096248f0d5b8f4cb87dd3a87cc1314 353 SUPERFAMILY SSF117143 78 331 5.62E-48 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VAA_03520 10096248f0d5b8f4cb87dd3a87cc1314 353 Gene3D G3DSA:2.60.98.20 154 316 1.4E-23 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VAA_03520 10096248f0d5b8f4cb87dd3a87cc1314 353 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VAA_01714 a65a966d7f50ffeb3987de4e83383bfd 1294 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1281 0.0 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VAA_01714 a65a966d7f50ffeb3987de4e83383bfd 1294 Pfam PF13502 AsmA-like C-terminal region 1026 1270 9.5E-56 T 13-10-2018 IPR032712 AsmA-like, C-terminal VAA_01714 a65a966d7f50ffeb3987de4e83383bfd 1294 Pfam PF13116 Protein of unknown function 503 789 1.4E-94 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 VAA_01030 fe8fdc837cea284e56bb4a24f386ef44 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 5 116 1.8E-37 T 13-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 VAA_01030 fe8fdc837cea284e56bb4a24f386ef44 120 SUPERFAMILY SSF141530 4 119 5.1E-35 T 13-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 VAA_01030 fe8fdc837cea284e56bb4a24f386ef44 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 3.0E-28 T 13-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 VAA_01030 fe8fdc837cea284e56bb4a24f386ef44 120 Gene3D G3DSA:2.40.33.40 2 120 3.7E-27 T 13-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 VAA_02161 bd22575eeded7052dbcb56ebcf57e1ae 287 Gene3D G3DSA:2.40.70.10 146 276 1.1E-41 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VAA_02161 bd22575eeded7052dbcb56ebcf57e1ae 287 SUPERFAMILY SSF50630 149 283 2.44E-41 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VAA_02161 bd22575eeded7052dbcb56ebcf57e1ae 287 Pfam PF05618 Putative ATP-dependant zinc protease 149 285 5.7E-47 T 13-10-2018 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 Gene3D G3DSA:1.10.1040.50 243 443 8.4E-71 T 13-10-2018 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 Gene3D G3DSA:3.90.226.10 1 53 3.0E-8 T 13-10-2018 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 SUPERFAMILY SSF48179 240 339 1.19E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 Gene3D G3DSA:3.40.50.720 56 242 2.3E-57 T 13-10-2018 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 59 238 9.8E-54 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 237 262 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 SUPERFAMILY SSF51735 55 238 3.82E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 SUPERFAMILY SSF48179 356 449 1.02E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_02360 cab3cdcfcb51405a002ddcff4247af75 450 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 240 333 1.7E-26 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 Gene3D G3DSA:3.30.1360.120 16 240 4.4E-83 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 SUPERFAMILY SSF103025 14 288 1.49E-88 T 13-10-2018 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 371 8.3E-21 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 SUPERFAMILY SSF101790 290 380 3.11E-25 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 Gene3D G3DSA:2.40.30.110 293 370 1.9E-26 T 13-10-2018 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 Gene3D G3DSA:3.30.70.1400 65 148 4.4E-83 T 13-10-2018 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 PIRSF PIRSF006487 1 381 1.7E-81 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 15 375 1.1E-108 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 Gene3D G3DSA:4.10.1250.10 242 290 1.1E-20 T 13-10-2018 VAA_01001 5bf0fc0c51eb064b37644fca6a98232d 381 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 264 1.5E-85 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VAA_03341 e49e7047538060553eaaddd54451954f 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 6 414 2.6E-190 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VAA_03341 e49e7047538060553eaaddd54451954f 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 372 1.1E-36 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VAA_03341 e49e7047538060553eaaddd54451954f 416 PIRSF PIRSF000447 3 416 3.3E-202 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VAA_03341 e49e7047538060553eaaddd54451954f 416 SUPERFAMILY SSF53901 217 415 8.49E-67 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03341 e49e7047538060553eaaddd54451954f 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 157 173 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VAA_03341 e49e7047538060553eaaddd54451954f 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 249 4.2E-64 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAA_03341 e49e7047538060553eaaddd54451954f 416 SUPERFAMILY SSF53901 5 254 9.88E-80 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03341 e49e7047538060553eaaddd54451954f 416 Gene3D G3DSA:3.40.47.10 1 257 6.8E-93 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03341 e49e7047538060553eaaddd54451954f 416 SMART SM00825 Beta-ketoacyl synthase 8 416 2.3E-15 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VAA_03341 e49e7047538060553eaaddd54451954f 416 Gene3D G3DSA:3.40.47.10 263 416 1.2E-52 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_01423 04422d86fe0fe3a5d30439f7f62ce00e 123 PIRSF PIRSF006113 4 123 1.8E-53 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VAA_01423 04422d86fe0fe3a5d30439f7f62ce00e 123 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 8 100 1.4E-33 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VAA_01423 04422d86fe0fe3a5d30439f7f62ce00e 123 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 9 122 1.3E-35 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VAA_01423 04422d86fe0fe3a5d30439f7f62ce00e 123 SUPERFAMILY SSF55620 3 122 1.56E-42 T 13-10-2018 VAA_01423 04422d86fe0fe3a5d30439f7f62ce00e 123 Gene3D G3DSA:3.30.479.10 4 123 1.1E-49 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VAA_03797 00db85191a89f132298f95ab1207ddec 635 SUPERFAMILY SSF56801 52 630 2.88E-104 T 13-10-2018 VAA_03797 00db85191a89f132298f95ab1207ddec 635 Gene3D G3DSA:3.40.50.12780 367 492 3.0E-23 T 13-10-2018 VAA_03797 00db85191a89f132298f95ab1207ddec 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 230 241 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_03797 00db85191a89f132298f95ab1207ddec 635 Gene3D G3DSA:3.40.50.12780 47 360 2.0E-53 T 13-10-2018 VAA_03797 00db85191a89f132298f95ab1207ddec 635 Pfam PF00501 AMP-binding enzyme 68 499 1.3E-85 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_00880 a038b1c07c45ed4a1176105d268bb169 596 Gene3D G3DSA:3.40.50.720 334 566 5.4E-21 T 13-10-2018 VAA_00880 a038b1c07c45ed4a1176105d268bb169 596 SUPERFAMILY SSF69572 348 509 1.09E-17 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAA_00880 a038b1c07c45ed4a1176105d268bb169 596 Pfam PF00899 ThiF family 336 462 7.0E-17 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 Hamap MF_00300 Chorismate synthase [aroC]. 25 367 37.453 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 Pfam PF01264 Chorismate synthase 25 360 2.3E-143 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 ProSitePatterns PS00787 Chorismate synthase signature 1. 31 46 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 SUPERFAMILY SSF103263 19 371 1.83E-149 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 ProSitePatterns PS00789 Chorismate synthase signature 3. 334 350 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 Gene3D G3DSA:3.60.150.10 16 375 4.3E-159 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 PIRSF PIRSF001456 18 375 1.6E-141 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 ProSitePatterns PS00788 Chorismate synthase signature 2. 139 155 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_03439 78984a5d9a01c8c9af1b3a373549fc71 376 TIGRFAM TIGR00033 aroC: chorismate synthase 25 365 4.1E-143 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VAA_02327 18ca01d63ab3a9a513520936aa4d07cd 270 Pfam PF13614 AAA domain 3 161 7.0E-20 T 13-10-2018 IPR025669 AAA domain VAA_02327 18ca01d63ab3a9a513520936aa4d07cd 270 Gene3D G3DSA:3.40.50.300 1 260 7.2E-74 T 13-10-2018 VAA_02327 18ca01d63ab3a9a513520936aa4d07cd 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 4.8E-111 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VAA_02327 18ca01d63ab3a9a513520936aa4d07cd 270 SUPERFAMILY SSF52540 1 268 3.74E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02327 18ca01d63ab3a9a513520936aa4d07cd 270 PIRSF PIRSF003092 1 270 1.3E-95 T 13-10-2018 IPR025501 ATP binding protein MinD VAA_01089 620c51903177ecc156edb08ec3b21a52 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 144 2.5E-38 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VAA_01089 620c51903177ecc156edb08ec3b21a52 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VAA_01089 620c51903177ecc156edb08ec3b21a52 154 Pfam PF02130 Uncharacterized protein family UPF0054 23 142 5.4E-39 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VAA_01089 620c51903177ecc156edb08ec3b21a52 154 SUPERFAMILY SSF55486 4 150 1.51E-49 T 13-10-2018 VAA_01089 620c51903177ecc156edb08ec3b21a52 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.693 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VAA_01089 620c51903177ecc156edb08ec3b21a52 154 Gene3D G3DSA:3.40.390.30 1 154 5.8E-61 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 220 233 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 SUPERFAMILY SSF53067 215 477 3.99E-26 T 13-10-2018 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 12 19 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 Gene3D G3DSA:3.30.420.40 10 210 2.6E-35 T 13-10-2018 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 Pfam PF00012 Hsp70 protein 10 340 4.8E-17 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 Gene3D G3DSA:3.90.640.10 256 336 2.6E-35 T 13-10-2018 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 SUPERFAMILY SSF53067 8 201 2.91E-27 T 13-10-2018 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 PRINTS PR00301 70kDa heat shock protein signature 159 179 8.3E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 PRINTS PR00301 70kDa heat shock protein signature 226 236 8.3E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 PRINTS PR00301 70kDa heat shock protein signature 8 21 8.3E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01459 1564845bf1f54666ed9adf1b0a393cd6 632 Gene3D G3DSA:3.30.420.40 213 255 2.6E-35 T 13-10-2018 VAA_02328 778e124212bbe26ab2c9999c4926abaf 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 85 1.1E-32 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VAA_02328 778e124212bbe26ab2c9999c4926abaf 88 Gene3D G3DSA:3.30.1070.10 21 82 3.9E-26 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VAA_02328 778e124212bbe26ab2c9999c4926abaf 88 Pfam PF03776 Septum formation topological specificity factor MinE 15 84 1.8E-23 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VAA_02328 778e124212bbe26ab2c9999c4926abaf 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.141 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VAA_02328 778e124212bbe26ab2c9999c4926abaf 88 SUPERFAMILY SSF55229 34 87 7.06E-17 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 Gene3D G3DSA:1.20.1530.20 8 391 3.2E-19 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 SUPERFAMILY SSF56176 498 569 2.18E-5 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 Pfam PF02080 TrkA-C domain 420 484 1.2E-12 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 384 3.7E-54 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 SMART SM01091 493 572 6.5E-7 T 13-10-2018 IPR005170 Transporter-associated domain VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 SUPERFAMILY SSF116726 413 484 1.29E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 Pfam PF03471 Transporter associated domain 495 569 1.2E-5 T 13-10-2018 IPR005170 Transporter-associated domain VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 Gene3D G3DSA:3.30.70.1450 411 485 2.4E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02554 8501a80e5ea7059ffa9e0965aee97390 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 50.133 T 13-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VAA_02293 c34027a9952963f8a790ef41aab1eb63 621 SUPERFAMILY SSF109998 39 241 4.24E-36 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily VAA_02293 c34027a9952963f8a790ef41aab1eb63 621 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VAA_02293 c34027a9952963f8a790ef41aab1eb63 621 Gene3D G3DSA:3.10.50.40 261 387 1.4E-31 T 13-10-2018 VAA_02293 c34027a9952963f8a790ef41aab1eb63 621 Pfam PF13616 PPIC-type PPIASE domain 262 362 1.0E-24 T 13-10-2018 VAA_02293 c34027a9952963f8a790ef41aab1eb63 621 Pfam PF13624 SurA N-terminal domain 1 166 8.3E-50 T 13-10-2018 VAA_02293 c34027a9952963f8a790ef41aab1eb63 621 SUPERFAMILY SSF54534 225 361 7.2E-28 T 13-10-2018 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 3.8E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 3.8E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 3.8E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 42 64 3.8E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 Gene3D G3DSA:3.10.290.10 326 416 1.0E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 48 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 Gene3D G3DSA:1.10.240.10 223 325 1.2E-34 T 13-10-2018 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 415 43.92 T 13-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 414 8.5E-121 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 SUPERFAMILY SSF55174 321 414 8.11E-14 T 13-10-2018 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 SUPERFAMILY SSF52374 2 323 6.1E-103 T 13-10-2018 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 Gene3D G3DSA:3.40.50.620 1 222 1.7E-89 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 Pfam PF00579 tRNA synthetases class I (W and Y) 27 323 2.2E-82 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03005 1476bd26198d4776735ee09180b8c6dd 416 Pfam PF01479 S4 domain 356 387 3.4E-7 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00596 2f7545082134a180df241c810277dbef 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 2.3E-36 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00596 2f7545082134a180df241c810277dbef 325 Gene3D G3DSA:1.10.3720.10 84 314 5.1E-17 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00596 2f7545082134a180df241c810277dbef 325 SUPERFAMILY SSF161098 89 302 2.49E-15 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00626 db08926b80b250edf4920483ab2ca2b9 328 SUPERFAMILY SSF56935 75 320 1.95E-5 T 13-10-2018 VAA_00626 db08926b80b250edf4920483ab2ca2b9 328 Pfam PF11383 Protein of unknown function (DUF3187) 10 320 2.6E-100 T 13-10-2018 IPR021523 Protein of unknown function DUF3187 VAA_00490 c13926a9ffeee45d232b35541738599d 270 Gene3D G3DSA:3.40.50.1860 102 211 8.0E-82 T 13-10-2018 VAA_00490 c13926a9ffeee45d232b35541738599d 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 14 218 4.2E-25 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_00490 c13926a9ffeee45d232b35541738599d 270 Hamap MF_00258 Glutamate racemase [murI]. 10 258 32.43 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_00490 c13926a9ffeee45d232b35541738599d 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 12 228 1.8E-69 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_00490 c13926a9ffeee45d232b35541738599d 270 SUPERFAMILY SSF53681 114 263 2.4E-34 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_00490 c13926a9ffeee45d232b35541738599d 270 Gene3D G3DSA:3.40.50.1860 14 234 8.0E-82 T 13-10-2018 VAA_00490 c13926a9ffeee45d232b35541738599d 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 77 85 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_00490 c13926a9ffeee45d232b35541738599d 270 SUPERFAMILY SSF53681 11 111 1.7E-29 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 PRINTS PR00481 Cytosol aminopeptidase signature 218 235 1.8E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 PRINTS PR00481 Cytosol aminopeptidase signature 277 298 1.8E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 PRINTS PR00481 Cytosol aminopeptidase signature 299 319 1.8E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 PRINTS PR00481 Cytosol aminopeptidase signature 240 261 1.8E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 PRINTS PR00481 Cytosol aminopeptidase signature 327 342 1.8E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 PIRSF PIRSF036388 28 458 4.5E-223 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 137 449 3.8E-102 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 Gene3D G3DSA:3.40.630.10 120 458 5.6E-106 T 13-10-2018 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 SUPERFAMILY SSF53187 132 455 3.77E-100 T 13-10-2018 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 Pfam PF12404 Peptidase 32 109 3.9E-32 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VAA_00512 c55581f044fdb98d70f1d77882fedc9f 458 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 303 310 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAA_02160 7c1a62af11be3dc0212a7526e03a530f 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.434 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VAA_02160 7c1a62af11be3dc0212a7526e03a530f 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 3.4E-172 T 13-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VAA_02160 7c1a62af11be3dc0212a7526e03a530f 323 SUPERFAMILY SSF53335 91 321 1.51E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02160 7c1a62af11be3dc0212a7526e03a530f 323 Gene3D G3DSA:3.40.50.150 92 293 2.1E-22 T 13-10-2018 VAA_02160 7c1a62af11be3dc0212a7526e03a530f 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.0E-147 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VAA_03738 01a6a737500663b73339ef6075e71510 142 Gene3D G3DSA:3.90.1180.10 1 142 3.2E-63 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_03738 01a6a737500663b73339ef6075e71510 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 4.7E-64 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03738 01a6a737500663b73339ef6075e71510 142 PIRSF PIRSF002181 1 142 6.7E-52 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VAA_03738 01a6a737500663b73339ef6075e71510 142 Pfam PF00572 Ribosomal protein L13 15 138 3.3E-56 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VAA_03738 01a6a737500663b73339ef6075e71510 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VAA_03738 01a6a737500663b73339ef6075e71510 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.522 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VAA_03738 01a6a737500663b73339ef6075e71510 142 SUPERFAMILY SSF52161 1 140 6.02E-60 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_03243 598934a2965537fd1baec8b64055bec2 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.7E-132 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAA_03243 598934a2965537fd1baec8b64055bec2 714 Pfam PF13500 AAA domain 3 229 9.8E-51 T 13-10-2018 VAA_03243 598934a2965537fd1baec8b64055bec2 714 SUPERFAMILY SSF52540 1 240 1.95E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03243 598934a2965537fd1baec8b64055bec2 714 Gene3D G3DSA:3.40.1390.20 225 365 2.3E-14 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VAA_03243 598934a2965537fd1baec8b64055bec2 714 SUPERFAMILY SSF53659 392 709 2.34E-95 T 13-10-2018 VAA_03243 598934a2965537fd1baec8b64055bec2 714 PIRSF PIRSF006107 1 714 0.0 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAA_03243 598934a2965537fd1baec8b64055bec2 714 Pfam PF07085 DRTGG domain 233 344 6.3E-28 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAA_03243 598934a2965537fd1baec8b64055bec2 714 Gene3D G3DSA:3.40.50.10950 398 709 9.9E-134 T 13-10-2018 VAA_03243 598934a2965537fd1baec8b64055bec2 714 Gene3D G3DSA:3.40.50.10750 529 682 9.9E-134 T 13-10-2018 VAA_03243 598934a2965537fd1baec8b64055bec2 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.1E-124 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VAA_03243 598934a2965537fd1baec8b64055bec2 714 SUPERFAMILY SSF75138 229 353 2.35E-24 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VAA_03243 598934a2965537fd1baec8b64055bec2 714 Gene3D G3DSA:3.40.50.300 5 210 5.1E-11 T 13-10-2018 VAA_01479 4279cb06b815f129c283d4c57da101c0 649 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 337 646 1.3E-140 T 13-10-2018 IPR018659 Protein of unknown function DUF2090 VAA_01479 4279cb06b815f129c283d4c57da101c0 649 SUPERFAMILY SSF53613 17 341 1.06E-73 T 13-10-2018 IPR029056 Ribokinase-like VAA_01479 4279cb06b815f129c283d4c57da101c0 649 Gene3D G3DSA:3.40.1190.20 21 324 3.2E-92 T 13-10-2018 IPR029056 Ribokinase-like VAA_01479 4279cb06b815f129c283d4c57da101c0 649 Gene3D G3DSA:2.20.150.10 26 121 3.2E-92 T 13-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 VAA_01479 4279cb06b815f129c283d4c57da101c0 649 Gene3D G3DSA:3.20.20.70 354 649 2.7E-49 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01479 4279cb06b815f129c283d4c57da101c0 649 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 286 299 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAA_01479 4279cb06b815f129c283d4c57da101c0 649 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 18 342 9.8E-126 T 13-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 VAA_01479 4279cb06b815f129c283d4c57da101c0 649 Pfam PF00294 pfkB family carbohydrate kinase 19 334 6.4E-48 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 Pfam PF00318 Ribosomal protein S2 9 224 3.5E-94 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 Gene3D G3DSA:3.40.50.10490 8 219 8.0E-92 T 13-10-2018 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 SUPERFAMILY SSF52313 6 229 2.09E-95 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.2E-107 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.332 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03577 3ce487bce43b49f3ebb23ada2bf24a78 243 Gene3D G3DSA:1.10.287.610 103 150 8.0E-92 T 13-10-2018 VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 SMART SM00487 41 242 2.0E-64 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 SMART SM00490 278 359 1.5E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 Pfam PF00270 DEAD/DEAH box helicase 47 215 1.6E-49 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 Gene3D G3DSA:3.40.50.300 234 470 4.5E-46 T 13-10-2018 VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 Pfam PF00271 Helicase conserved C-terminal domain 251 359 3.8E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 22 479 50.066 T 13-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 SUPERFAMILY SSF52540 94 380 9.07E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 Gene3D G3DSA:3.40.50.300 15 230 4.6E-77 T 13-10-2018 VAA_01450 190c9776d09f58e1035d6aacb0babc44 485 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 173 181 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 Gene3D G3DSA:1.10.260.40 2 59 5.6E-20 T 13-10-2018 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 Gene3D G3DSA:3.40.50.2300 65 309 1.8E-62 T 13-10-2018 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 Pfam PF13377 Periplasmic binding protein-like domain 170 327 1.3E-26 T 13-10-2018 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 SUPERFAMILY SSF53822 58 318 5.5E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 SUPERFAMILY SSF47413 2 60 8.04E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 SMART SM00354 1 71 6.6E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.6E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 Gene3D G3DSA:3.40.50.2300 164 286 1.8E-62 T 13-10-2018 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.3E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01378 c0375d71cdc91348718c7a7fb0e3f5d2 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.3E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_02864 004eb9bce599a076dec7aae04d18993b 287 Gene3D G3DSA:3.40.50.300 4 248 1.0E-45 T 13-10-2018 VAA_02864 004eb9bce599a076dec7aae04d18993b 287 SMART SM00382 32 210 2.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02864 004eb9bce599a076dec7aae04d18993b 287 SUPERFAMILY SSF52540 3 224 6.49E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02864 004eb9bce599a076dec7aae04d18993b 287 Pfam PF00005 ABC transporter 23 160 7.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 2.8E-70 T 13-10-2018 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 SUPERFAMILY SSF54211 221 393 1.04E-57 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Gene3D G3DSA:3.30.230.10 221 393 1.5E-72 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_00849 219d66e97da22453b4dab65f596dcda4 805 SUPERFAMILY SSF55874 4 212 1.31E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00849 219d66e97da22453b4dab65f596dcda4 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Gene3D G3DSA:3.30.565.10 1 220 2.5E-92 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Pfam PF01751 Toprim domain 420 532 1.1E-18 T 13-10-2018 IPR006171 TOPRIM domain VAA_00849 219d66e97da22453b4dab65f596dcda4 805 SMART SM00433 35 798 8.5E-263 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Gene3D G3DSA:3.40.50.670 706 804 2.5E-26 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 5.6E-30 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 106.92 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Pfam PF00204 DNA gyrase B 221 391 3.0E-59 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 3.8E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Gene3D G3DSA:3.40.50.670 399 574 4.6E-75 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 4.9E-87 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 SMART SM00387 31 175 3.8E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00849 219d66e97da22453b4dab65f596dcda4 805 SUPERFAMILY SSF56719 395 796 1.54E-87 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAA_00849 219d66e97da22453b4dab65f596dcda4 805 Gene3D G3DSA:3.10.20.690 593 684 2.2E-32 T 13-10-2018 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 SMART SM00388 289 354 1.4E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 Gene3D G3DSA:1.20.1480.50 164 254 1.3E-7 T 13-10-2018 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 Gene3D G3DSA:1.10.287.130 255 352 5.7E-30 T 13-10-2018 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 4.4E-54 T 13-10-2018 IPR019247 Histidine kinase BarA, N-terminal VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 SUPERFAMILY SSF55874 343 433 1.58E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 Gene3D G3DSA:3.30.565.10 353 439 3.2E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 SUPERFAMILY SSF158472 199 246 6.93E-7 T 13-10-2018 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 SMART SM00304 197 249 5.1E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 3.9E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_03770 245cb299c04d6024e85ab9d54f3701ae 440 SUPERFAMILY SSF47384 274 355 3.53E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_02918 94460d84bd65e1cddaa9c197ae49ba39 100 SUPERFAMILY SSF58042 40 99 8.24E-14 T 13-10-2018 VAA_02918 94460d84bd65e1cddaa9c197ae49ba39 100 Gene3D G3DSA:1.20.5.190 38 99 1.4E-9 T 13-10-2018 VAA_02918 94460d84bd65e1cddaa9c197ae49ba39 100 PIRSF PIRSF002855 12 100 6.7E-31 T 13-10-2018 IPR016367 Murein-lipoprotein VAA_02918 94460d84bd65e1cddaa9c197ae49ba39 100 Pfam PF04728 Lipoprotein leucine-zipper 41 100 6.5E-21 T 13-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VAA_03543 bf4ff994de1178738692c58f35a56b48 352 SUPERFAMILY SSF56042 178 342 4.04E-61 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_03543 bf4ff994de1178738692c58f35a56b48 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 171 7.0E-16 T 13-10-2018 IPR016188 PurM-like, N-terminal domain VAA_03543 bf4ff994de1178738692c58f35a56b48 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 14 351 47.608 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_03543 bf4ff994de1178738692c58f35a56b48 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 14 341 1.4E-150 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VAA_03543 bf4ff994de1178738692c58f35a56b48 352 SUPERFAMILY SSF55326 14 177 1.21E-54 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_03543 bf4ff994de1178738692c58f35a56b48 352 Gene3D G3DSA:3.90.650.10 178 352 5.3E-72 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VAA_03543 bf4ff994de1178738692c58f35a56b48 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 184 343 1.7E-38 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VAA_03543 bf4ff994de1178738692c58f35a56b48 352 Gene3D G3DSA:3.30.1330.10 13 177 1.3E-70 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 Gene3D G3DSA:3.30.420.40 379 433 1.6E-13 T 13-10-2018 VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 SUPERFAMILY SSF53067 208 447 6.79E-34 T 13-10-2018 VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 Gene3D G3DSA:3.90.640.10 336 378 1.6E-13 T 13-10-2018 VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 SUPERFAMILY SSF53067 1 202 8.74E-26 T 13-10-2018 VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 Pfam PF00012 Hsp70 protein 130 259 1.2E-11 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 Pfam PF00012 Hsp70 protein 337 443 1.3E-5 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_02988 dfb6c15c50f4a11fad738b6ce4605c28 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VAA_00762 fdcc1a8e359924519ce01b7f1de7102b 394 Pfam PF02595 Glycerate kinase family 18 387 6.0E-153 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VAA_00762 fdcc1a8e359924519ce01b7f1de7102b 394 SUPERFAMILY SSF110738 16 390 3.92E-147 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VAA_00762 fdcc1a8e359924519ce01b7f1de7102b 394 PIRSF PIRSF006078 16 391 2.3E-143 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VAA_00762 fdcc1a8e359924519ce01b7f1de7102b 394 Gene3D G3DSA:3.40.50.10350 17 376 9.0E-145 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VAA_00762 fdcc1a8e359924519ce01b7f1de7102b 394 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 17 390 3.9E-168 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VAA_00762 fdcc1a8e359924519ce01b7f1de7102b 394 Gene3D G3DSA:3.90.1510.10 57 291 9.0E-145 T 13-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VAA_02854 8d2be885a649fafa6df124f167891ed0 131 Pfam PF01124 MAPEG family 5 121 3.3E-23 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VAA_02854 8d2be885a649fafa6df124f167891ed0 131 Gene3D G3DSA:1.20.120.550 1 128 6.8E-27 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VAA_02854 8d2be885a649fafa6df124f167891ed0 131 SUPERFAMILY SSF161084 3 126 3.66E-30 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VAA_02011 e4372223155d9888678adb8c2ed2e010 180 Gene3D G3DSA:1.10.287.950 2 180 2.6E-52 T 13-10-2018 VAA_02011 e4372223155d9888678adb8c2ed2e010 180 SUPERFAMILY SSF58104 9 180 6.8E-57 T 13-10-2018 VAA_02011 e4372223155d9888678adb8c2ed2e010 180 SMART SM00283 4 179 4.5E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02011 e4372223155d9888678adb8c2ed2e010 180 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 8 147 2.6E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01502 88774e86c777776836cef47ce1467133 166 SUPERFAMILY SSF52266 3 165 1.47E-41 T 13-10-2018 VAA_01502 88774e86c777776836cef47ce1467133 166 Gene3D G3DSA:3.40.50.1110 1 166 2.3E-53 T 13-10-2018 IPR036514 SGNH hydrolase superfamily VAA_01502 88774e86c777776836cef47ce1467133 166 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 148 5.5E-17 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 139 2.7E-11 T 13-10-2018 IPR000014 PAS domain VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 Pfam PF00563 EAL domain 322 555 1.3E-62 T 13-10-2018 IPR001633 EAL domain VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 Gene3D G3DSA:3.20.20.450 314 567 3.9E-77 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 Gene3D G3DSA:3.30.450.20 35 137 6.0E-15 T 13-10-2018 VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 293 2.7E-13 T 13-10-2018 IPR000160 GGDEF domain VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 Pfam PF08447 PAS fold 47 122 5.0E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 SUPERFAMILY SSF55073 152 305 5.34E-18 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 Gene3D G3DSA:3.30.70.270 145 309 1.6E-18 T 13-10-2018 VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 SUPERFAMILY SSF141868 320 565 2.48E-72 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 SUPERFAMILY SSF55785 27 137 1.92E-15 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 SMART SM00052 314 560 1.9E-70 T 13-10-2018 IPR001633 EAL domain VAA_00887 e19cd2134702ce404a4fe4cfa7a4b8c2 571 SMART SM00267 135 304 8.9E-11 T 13-10-2018 IPR000160 GGDEF domain VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 Gene3D G3DSA:3.50.50.60 7 339 6.0E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 2.9E-123 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 Gene3D G3DSA:3.30.9.50 84 273 6.0E-96 T 13-10-2018 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 7 391 1.3E-151 T 13-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.8E-11 T 13-10-2018 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 4.8E-11 T 13-10-2018 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 4.8E-11 T 13-10-2018 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 4.8E-11 T 13-10-2018 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 SUPERFAMILY SSF51905 5 385 1.02E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 Pfam PF01494 FAD binding domain 6 341 4.3E-24 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VAA_03789 1c77e4cc3abf8bbc186a8a288baa9935 395 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 Pfam PF01491 Frataxin-like domain 1 100 2.5E-29 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.3E-41 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 SUPERFAMILY SSF55387 1 103 2.27E-38 T 13-10-2018 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.576 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 SMART SM01219 1 104 1.2E-52 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 Gene3D G3DSA:3.30.920.10 1 104 1.3E-37 T 13-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_01953 81166bb0943d0b5d0c76c1f9a2725b5c 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 13-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VAA_00154 8f51a74d6c42556599550fd4208fcad4 379 Gene3D G3DSA:3.40.190.10 154 329 2.9E-10 T 13-10-2018 VAA_00154 8f51a74d6c42556599550fd4208fcad4 379 Pfam PF13416 Bacterial extracellular solute-binding protein 55 328 3.7E-28 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_00154 8f51a74d6c42556599550fd4208fcad4 379 PIRSF PIRSF029172 1 379 3.5E-172 T 13-10-2018 IPR027020 Protein ynjB VAA_00154 8f51a74d6c42556599550fd4208fcad4 379 SUPERFAMILY SSF53850 31 377 8.26E-45 T 13-10-2018 VAA_00154 8f51a74d6c42556599550fd4208fcad4 379 Gene3D G3DSA:3.40.190.10 28 144 6.3E-8 T 13-10-2018 VAA_01976 0dfd59dda2d7c15f21c841ea057b8364 259 Gene3D G3DSA:3.40.50.150 35 258 1.1E-75 T 13-10-2018 VAA_01976 0dfd59dda2d7c15f21c841ea057b8364 259 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 35 253 1.9E-87 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VAA_01976 0dfd59dda2d7c15f21c841ea057b8364 259 SUPERFAMILY SSF53335 39 239 1.77E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01976 0dfd59dda2d7c15f21c841ea057b8364 259 Pfam PF13489 Methyltransferase domain 76 225 1.2E-24 T 13-10-2018 VAA_01976 0dfd59dda2d7c15f21c841ea057b8364 259 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 35 259 37.192 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 Gene3D G3DSA:3.40.50.720 1 162 1.5E-51 T 13-10-2018 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 SUPERFAMILY SSF48179 164 286 1.25E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 1.2E-49 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 SUPERFAMILY SSF51735 1 163 2.72E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 PIRSF PIRSF000103 1 287 2.4E-71 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 Gene3D G3DSA:1.10.1040.10 163 287 1.8E-34 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VAA_00239 b6a380a67e28c7ea8d68b23bd39a3ff4 287 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.2E-29 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VAA_01272 57c4725e90c44518759b176d60a5e2b8 260 SMART SM00382 49 231 7.7E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01272 57c4725e90c44518759b176d60a5e2b8 260 SUPERFAMILY SSF52540 25 253 9.94E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01272 57c4725e90c44518759b176d60a5e2b8 260 PIRSF PIRSF039085 21 259 3.3E-100 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAA_01272 57c4725e90c44518759b176d60a5e2b8 260 Gene3D G3DSA:3.40.50.300 22 260 1.2E-77 T 13-10-2018 VAA_01272 57c4725e90c44518759b176d60a5e2b8 260 Pfam PF00005 ABC transporter 40 183 3.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01272 57c4725e90c44518759b176d60a5e2b8 260 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 254 266 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 119 8.8E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 206 226 8.8E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 227 248 8.8E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 138 8.8E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 80 99 8.8E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 251 276 8.8E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 Pfam PF00813 FliP family 82 273 7.6E-80 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 206 221 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 199 211 1.3E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 78 87 1.3E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 164 1.3E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 1.3E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 267 277 1.3E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 1.3E-16 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_03446 87a6fd3832050c49c085a074992fcdf3 279 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 82 277 2.3E-82 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 13-10-2018 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 3.2E-124 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 Gene3D G3DSA:3.40.220.10 1 159 1.5E-59 T 13-10-2018 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 SUPERFAMILY SSF53187 179 496 1.72E-125 T 13-10-2018 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.0E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.0E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.0E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.0E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.0E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 Gene3D G3DSA:3.40.630.10 181 497 8.3E-142 T 13-10-2018 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 6.6E-34 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VAA_02772 2608925d376dff213ccccb9e71ddd6a1 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 41.052 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 SMART SM00382 312 503 5.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 SMART SM00382 35 235 8.9E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 Pfam PF00005 ABC transporter 304 454 4.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 527 1.3E-4 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 263 0.0058 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 SUPERFAMILY SSF52540 6 257 3.13E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 Pfam PF00005 ABC transporter 27 185 3.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 Gene3D G3DSA:3.40.50.300 274 529 7.0E-77 T 13-10-2018 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 Gene3D G3DSA:3.40.50.300 4 270 2.5E-81 T 13-10-2018 VAA_01606 26cb86c91dfe1945a64f1bc6cb493f3a 530 SUPERFAMILY SSF52540 277 525 1.2E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 SUPERFAMILY SSF111369 41 275 1.57E-25 T 13-10-2018 VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 Gene3D G3DSA:2.40.420.20 257 340 6.1E-13 T 13-10-2018 VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 Gene3D G3DSA:2.40.30.170 44 252 4.1E-43 T 13-10-2018 VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 Gene3D G3DSA:2.40.50.100 50 192 4.1E-43 T 13-10-2018 VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 331 1.2E-57 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 256 2.3E-18 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_01594 84d63538f6bbf3a4eea1689f04e426de 341 Gene3D G3DSA:1.10.287.470 85 158 4.1E-43 T 13-10-2018 VAA_03597 d8329c614d391f42a73971509ab4f9fd 431 PIRSF PIRSF005353 1 431 1.3E-183 T 13-10-2018 IPR026033 Purine permease PbuG-like VAA_03597 d8329c614d391f42a73971509ab4f9fd 431 Pfam PF00860 Permease family 18 391 2.6E-53 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VAA_03291 cbf4270c5c5b072863f6c9c39c54a168 545 Pfam PF08019 Domain of unknown function (DUF1705) 58 209 6.0E-46 T 13-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VAA_03291 cbf4270c5c5b072863f6c9c39c54a168 545 Pfam PF00884 Sulfatase 241 529 5.4E-50 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAA_03291 cbf4270c5c5b072863f6c9c39c54a168 545 Gene3D G3DSA:3.40.720.10 220 545 3.2E-85 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_03291 cbf4270c5c5b072863f6c9c39c54a168 545 SUPERFAMILY SSF53649 241 533 2.13E-20 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_03490 25de60eb095da498154140d827a941bb 499 Gene3D G3DSA:1.25.40.10 274 486 1.3E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03490 25de60eb095da498154140d827a941bb 499 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 16 498 40.369 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VAA_03490 25de60eb095da498154140d827a941bb 499 Gene3D G3DSA:3.30.2010.10 91 163 5.7E-6 T 13-10-2018 VAA_03490 25de60eb095da498154140d827a941bb 499 Pfam PF14559 Tetratricopeptide repeat 367 430 3.7E-10 T 13-10-2018 VAA_03490 25de60eb095da498154140d827a941bb 499 SUPERFAMILY SSF48452 305 481 1.21E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03490 25de60eb095da498154140d827a941bb 499 Pfam PF01435 Peptidase family M48 85 270 2.7E-27 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PIRSF PIRSF000109 1 477 2.0E-241 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.6E-84 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.6E-84 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.6E-84 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-84 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.6E-84 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-84 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 1.8E-126 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 Gene3D G3DSA:1.10.1040.10 181 434 4.5E-103 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 Gene3D G3DSA:3.40.50.720 1 180 4.3E-56 T 13-10-2018 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 Gene3D G3DSA:1.20.5.320 435 482 3.8E-25 T 13-10-2018 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 SUPERFAMILY SSF48179 177 472 4.28E-126 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 SMART SM01350 179 469 8.7E-213 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 SUPERFAMILY SSF51735 4 174 1.13E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 6.6E-51 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 2.1E-233 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_01354 32fdac5f9e4006de5c579bdf3e3cb1c6 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 13-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 184 6.0E-16 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 Gene3D G3DSA:3.40.50.1000 4 195 5.9E-49 T 13-10-2018 IPR023214 HAD superfamily VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 SUPERFAMILY SSF56784 1 215 5.1E-49 T 13-10-2018 IPR036412 HAD-like superfamily VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 Gene3D G3DSA:1.10.150.240 16 86 5.9E-49 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 4.7E-30 T 13-10-2018 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.4E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.4E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.4E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_012817 3f3bd980458b4bd980d03a59f730cfa0 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.4E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_03319 4fe59d74616d62a275e31777682cd64b 404 SUPERFAMILY SSF53383 5 400 1.34E-94 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_03319 4fe59d74616d62a275e31777682cd64b 404 Gene3D G3DSA:3.40.640.10 53 294 7.2E-145 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_03319 4fe59d74616d62a275e31777682cd64b 404 Gene3D G3DSA:3.90.1150.10 21 398 7.2E-145 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_03319 4fe59d74616d62a275e31777682cd64b 404 Pfam PF00155 Aminotransferase class I and II 61 390 3.7E-47 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_01849 ee6ed0f5a060de2a37ecdd6fe64269ff 204 Gene3D G3DSA:1.10.760.10 44 204 2.3E-71 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_01849 ee6ed0f5a060de2a37ecdd6fe64269ff 204 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 185 2.5E-81 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VAA_01849 ee6ed0f5a060de2a37ecdd6fe64269ff 204 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 7 185 8.5E-82 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VAA_01849 ee6ed0f5a060de2a37ecdd6fe64269ff 204 SUPERFAMILY SSF46626 19 200 1.55E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 623 1.7E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 SUPERFAMILY SSF64518 168 623 2.35E-24 T 13-10-2018 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 335 3.1E-60 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 3.7E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.7E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 3.7E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 PRINTS PR01005 Flagellar hook-associated protein signature 406 423 3.7E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAA_03513 ca7ce0b98028f33dfd78bb978d7099b0 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 3.7E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 Gene3D G3DSA:3.40.50.12740 4 206 4.0E-64 T 13-10-2018 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 Pfam PF00072 Response regulator receiver domain 6 117 2.5E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 SMART SM00448 4 117 2.3E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 SUPERFAMILY SSF46894 128 204 1.12E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.3E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.3E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.3E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 SMART SM00421 145 202 6.4E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 2.5E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01059 04e55c11d7c3ae7b31de5ed67adfdb91 210 SUPERFAMILY SSF52172 4 135 1.04E-34 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 SUPERFAMILY SSF56784 106 313 2.31E-48 T 13-10-2018 IPR036412 HAD-like superfamily VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 Gene3D G3DSA:3.40.50.1000 5 313 3.5E-175 T 13-10-2018 IPR023214 HAD superfamily VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 Gene3D G3DSA:1.10.150.210 118 180 3.5E-175 T 13-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 110 280 1.9E-25 T 13-10-2018 VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 Gene3D G3DSA:3.30.70.2020 11 325 3.5E-175 T 13-10-2018 VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 105 313 1.1E-83 T 13-10-2018 VAA_03666 e4ef0a0f838880133e9cc54d75f9cb5b 329 Pfam PF00702 haloacid dehalogenase-like hydrolase 110 282 1.5E-15 T 13-10-2018 VAA_03275 9e28bd396007eda1638ff4ec44085249 591 SUPERFAMILY SSF52540 15 367 2.06E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03275 9e28bd396007eda1638ff4ec44085249 591 Pfam PF13175 AAA ATPase domain 15 364 7.3E-20 T 13-10-2018 VAA_03275 9e28bd396007eda1638ff4ec44085249 591 Gene3D G3DSA:3.40.50.300 15 389 3.5E-18 T 13-10-2018 VAA_02851 75de89c8363d2ec31430cf71dea94d46 713 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 248 499 2.7E-14 T 13-10-2018 IPR018712 Domain of unknown function DUF2235 VAA_01324 c059d1b601a9c211bd15c3a330933b66 281 Gene3D G3DSA:1.10.10.60 157 259 1.7E-22 T 13-10-2018 VAA_01324 c059d1b601a9c211bd15c3a330933b66 281 SUPERFAMILY SSF46689 208 257 8.24E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01324 c059d1b601a9c211bd15c3a330933b66 281 SMART SM00342 173 255 1.6E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_01324 c059d1b601a9c211bd15c3a330933b66 281 Pfam PF12833 Helix-turn-helix domain 180 256 7.8E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_01324 c059d1b601a9c211bd15c3a330933b66 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 251 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_00572 9f82312905379c72f1c73d6df2d90915 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.504 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VAA_00572 9f82312905379c72f1c73d6df2d90915 544 Pfam PF03109 ABC1 family 112 230 6.5E-36 T 13-10-2018 IPR004147 UbiB domain VAA_00572 9f82312905379c72f1c73d6df2d90915 544 SUPERFAMILY SSF56112 94 436 5.11E-42 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_00572 9f82312905379c72f1c73d6df2d90915 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 3.9E-176 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VAA_02732 54615418da40dba720ec7785c25737fc 178 Pfam PF04751 Protein of unknown function (DUF615) 21 171 2.2E-56 T 13-10-2018 IPR006839 Ribosome-associated, YjgA VAA_02732 54615418da40dba720ec7785c25737fc 178 SUPERFAMILY SSF158710 31 173 4.05E-52 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily VAA_02732 54615418da40dba720ec7785c25737fc 178 Gene3D G3DSA:1.10.60.30 106 177 2.2E-25 T 13-10-2018 VAA_02732 54615418da40dba720ec7785c25737fc 178 Gene3D G3DSA:1.10.60.30 31 105 1.0E-26 T 13-10-2018 VAA_02732 54615418da40dba720ec7785c25737fc 178 PIRSF PIRSF016183 3 177 2.2E-71 T 13-10-2018 IPR006839 Ribosome-associated, YjgA VAA_02732 54615418da40dba720ec7785c25737fc 178 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 11 175 23.189 T 13-10-2018 IPR006839 Ribosome-associated, YjgA VAA_00927 d488cc9939d154631287c0d33bf38cb1 249 Pfam PF04402 Protein of unknown function (DUF541) 51 222 5.3E-17 T 13-10-2018 IPR007497 Protein of unknown function DUF541 VAA_00927 d488cc9939d154631287c0d33bf38cb1 249 PIRSF PIRSF029033 9 249 1.0E-113 T 13-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VAA_00927 d488cc9939d154631287c0d33bf38cb1 249 Gene3D G3DSA:3.30.70.2970 63 179 9.3E-11 T 13-10-2018 VAA_00927 d488cc9939d154631287c0d33bf38cb1 249 Gene3D G3DSA:3.30.110.170 53 221 9.3E-11 T 13-10-2018 VAA_00829 2812316fb67259df6c640b93b357e43e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.392 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VAA_00829 2812316fb67259df6c640b93b357e43e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.9E-36 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VAA_00829 2812316fb67259df6c640b93b357e43e 156 Gene3D G3DSA:1.20.5.620 62 122 1.1E-22 T 13-10-2018 VAA_00829 2812316fb67259df6c640b93b357e43e 156 SUPERFAMILY SSF81573 63 121 4.71E-14 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VAA_00829 2812316fb67259df6c640b93b357e43e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.7E-59 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VAA_02971 24792a74cb39ce0f6acf0c95ca231f2a 304 Pfam PF00892 EamA-like transporter family 159 285 7.9E-8 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_02971 24792a74cb39ce0f6acf0c95ca231f2a 304 SUPERFAMILY SSF103481 196 291 8.5E-6 T 13-10-2018 VAA_02971 24792a74cb39ce0f6acf0c95ca231f2a 304 SUPERFAMILY SSF103481 43 140 3.79E-5 T 13-10-2018 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 SUPERFAMILY SSF55604 14 85 6.02E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 10 465 2.5E-206 T 13-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 Gene3D G3DSA:3.30.1360.60 4 82 2.7E-24 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 Pfam PF00367 phosphotransferase system, EIIB 16 47 1.6E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 Pfam PF02378 Phosphotransferase system, EIIC 116 408 5.2E-33 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_01142 545e931b6e8a90c335838062143f8fc5 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 4.7E-16 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAA_03158 a4f6a63cee270e06b68966ca44fe7dd5 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 1.4E-30 T 13-10-2018 IPR011846 Cyd operon protein YbgE VAA_03158 a4f6a63cee270e06b68966ca44fe7dd5 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 9 99 4.6E-38 T 13-10-2018 IPR011846 Cyd operon protein YbgE VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 SUPERFAMILY SSF46689 193 240 1.79E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 Gene3D G3DSA:1.10.10.60 189 240 1.4E-12 T 13-10-2018 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 4.4E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 4.4E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 SUPERFAMILY SSF46689 243 291 7.17E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 Pfam PF12833 Helix-turn-helix domain 213 291 7.1E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 SMART SM00342 207 290 1.9E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02035 15a0e13eccbe96989a63cb5eb5386849 294 Gene3D G3DSA:1.10.10.60 241 293 1.0E-17 T 13-10-2018 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 Gene3D G3DSA:1.10.1740.190 310 456 1.7E-34 T 13-10-2018 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 Pfam PF01752 Collagenase 281 565 5.2E-112 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 Gene3D G3DSA:1.10.390.20 457 583 4.4E-8 T 13-10-2018 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 399 415 1.0E-31 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 465 480 1.0E-31 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 381 395 1.0E-31 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 104 122 1.0E-31 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 441 459 1.0E-31 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 Gene3D G3DSA:2.60.120.380 591 694 4.2E-12 T 13-10-2018 VAA_02998 c67adf6c2733bba5748854812e81fd8b 796 Pfam PF08453 Peptidase family M9 N-terminal 38 220 8.2E-50 T 13-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VAA_01708 a4020843bba6f23ade5b4475dda4bd1b 542 Gene3D G3DSA:3.10.540.20 41 86 1.5E-6 T 13-10-2018 VAA_01708 a4020843bba6f23ade5b4475dda4bd1b 542 Pfam PF00589 Phage integrase family 279 501 2.8E-7 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_01708 a4020843bba6f23ade5b4475dda4bd1b 542 Gene3D G3DSA:1.10.443.10 267 506 2.5E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_01708 a4020843bba6f23ade5b4475dda4bd1b 542 SUPERFAMILY SSF56349 296 503 6.77E-14 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_02749 d93afc8bf37050b799a1a71851bda765 263 Pfam PF02405 Permease MlaE 48 259 5.9E-75 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VAA_02749 d93afc8bf37050b799a1a71851bda765 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 8.0E-99 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VAA_04295 de89e42575df9710a043e461649fc1fa 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site VAA_04295 de89e42575df9710a043e461649fc1fa 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 3.3E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_04295 de89e42575df9710a043e461649fc1fa 70 PRINTS PR00050 Cold shock protein signature 7 22 5.6E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_04295 de89e42575df9710a043e461649fc1fa 70 PRINTS PR00050 Cold shock protein signature 28 37 5.6E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_04295 de89e42575df9710a043e461649fc1fa 70 PRINTS PR00050 Cold shock protein signature 43 61 5.6E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VAA_04295 de89e42575df9710a043e461649fc1fa 70 PIRSF PIRSF002599 1 70 7.2E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VAA_04295 de89e42575df9710a043e461649fc1fa 70 Gene3D G3DSA:2.40.50.140 2 68 7.5E-29 T 13-10-2018 VAA_04295 de89e42575df9710a043e461649fc1fa 70 SUPERFAMILY SSF50249 3 69 3.24E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_04295 de89e42575df9710a043e461649fc1fa 70 SMART SM00357 6 70 2.2E-29 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 PRINTS PR01438 Universal stress protein signature 120 142 5.3E-12 T 13-10-2018 IPR006015 Universal stress protein A VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 PRINTS PR01438 Universal stress protein signature 2 20 5.3E-12 T 13-10-2018 IPR006015 Universal stress protein A VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 PRINTS PR01438 Universal stress protein signature 102 114 5.3E-12 T 13-10-2018 IPR006015 Universal stress protein A VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 PIRSF PIRSF006276 1 145 4.0E-21 T 13-10-2018 IPR006015 Universal stress protein A VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 SUPERFAMILY SSF52402 2 143 6.45E-36 T 13-10-2018 VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 Gene3D G3DSA:3.40.50.620 1 142 4.4E-37 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_01690 0f51b600f4183ae50c9a405165a78e37 145 Pfam PF00582 Universal stress protein family 1 142 2.2E-33 T 13-10-2018 IPR006016 UspA VAA_02797 09572c861d81922303ebd8460288538c 411 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 193 8.5E-26 T 13-10-2018 VAA_02797 09572c861d81922303ebd8460288538c 411 Gene3D G3DSA:3.40.390.10 18 255 5.4E-8 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VAA_02797 09572c861d81922303ebd8460288538c 411 SUPERFAMILY SSF55486 23 245 2.0E-17 T 13-10-2018 VAA_02797 09572c861d81922303ebd8460288538c 411 Gene3D G3DSA:2.60.120.260 318 410 8.6E-7 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_02797 09572c861d81922303ebd8460288538c 411 SUPERFAMILY SSF49785 304 410 2.98E-15 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_02797 09572c861d81922303ebd8460288538c 411 Pfam PF01483 Proprotein convertase P-domain 328 409 4.3E-13 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 6.6E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 Gene3D G3DSA:3.40.190.10 184 282 3.3E-41 T 13-10-2018 VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 SUPERFAMILY SSF46785 13 95 5.78E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 Gene3D G3DSA:1.10.10.10 9 97 1.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 SUPERFAMILY SSF53850 99 309 8.38E-34 T 13-10-2018 VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 Pfam PF03466 LysR substrate binding domain 102 308 1.1E-17 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02975 c408a85dd64ea6c20431979850c07d8e 311 Gene3D G3DSA:3.40.190.10 99 306 3.3E-41 T 13-10-2018 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.1E-44 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 SUPERFAMILY SSF56214 3 125 2.75E-32 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 1.0E-31 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 Gene3D G3DSA:3.90.470.20 1 126 1.1E-41 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 27.431 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 1.6E-25 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VAA_03771 4506e7b5532b26c5d48c3ee3fb6a5dfc 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 3.2E-34 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 Gene3D G3DSA:2.60.40.10 629 738 1.4E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 SMART SM00342 1034 1116 5.8E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 Gene3D G3DSA:2.130.10.10 49 318 2.8E-22 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 SUPERFAMILY SSF101898 369 620 3.66E-7 T 13-10-2018 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 SUPERFAMILY SSF46689 1070 1117 1.21E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 Gene3D G3DSA:1.10.10.60 1014 1066 1.6E-9 T 13-10-2018 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 Gene3D G3DSA:2.130.10.10 379 621 4.7E-25 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1085 1100 2.2E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1100 1116 2.2E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 Gene3D G3DSA:1.10.10.60 1067 1119 1.8E-17 T 13-10-2018 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1071 1112 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 Pfam PF12833 Helix-turn-helix domain 1041 1116 2.0E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_03402 c0a91578adafcfbcfed96098a8f680b3 1120 SUPERFAMILY SSF101898 203 453 4.97E-12 T 13-10-2018 VAA_03363 a91d9c5924d3d7d7be966828a9d41887 296 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 15 292 27.21 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VAA_03363 a91d9c5924d3d7d7be966828a9d41887 296 Pfam PF02634 FdhD/NarQ family 41 291 1.9E-63 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VAA_03363 a91d9c5924d3d7d7be966828a9d41887 296 PIRSF PIRSF015626 5 295 2.9E-64 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VAA_03363 a91d9c5924d3d7d7be966828a9d41887 296 SUPERFAMILY SSF53927 32 291 1.8E-62 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VAA_03363 a91d9c5924d3d7d7be966828a9d41887 296 Gene3D G3DSA:3.40.140.10 152 296 5.9E-49 T 13-10-2018 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 SUPERFAMILY SSF47060 3 89 4.41E-34 T 13-10-2018 IPR009068 S15/NS1, RNA-binding VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 4.0E-26 T 13-10-2018 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 Gene3D G3DSA:1.10.287.10 2 89 3.0E-34 T 13-10-2018 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 Pfam PF00312 Ribosomal protein S15 8 88 2.6E-35 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.998 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 SMART SM01387 8 88 9.3E-51 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00807 54b4e06258e5ab8037ee357a16a3ecf9 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.1E-37 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03260 1a49f294ea96513ba96a9631440257c4 85 Gene3D G3DSA:1.10.1200.10 2 85 1.0E-18 T 13-10-2018 IPR036736 ACP-like superfamily VAA_03260 1a49f294ea96513ba96a9631440257c4 85 SUPERFAMILY SSF47336 4 82 2.09E-19 T 13-10-2018 IPR036736 ACP-like superfamily VAA_03260 1a49f294ea96513ba96a9631440257c4 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.289 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VAA_03260 1a49f294ea96513ba96a9631440257c4 85 Pfam PF00550 Phosphopantetheine attachment site 11 76 2.2E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAA_02290 c8a0ec540ff8ce83b70f05638fd8f9b2 226 Pfam PF02224 Cytidylate kinase 8 221 6.6E-80 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VAA_02290 c8a0ec540ff8ce83b70f05638fd8f9b2 226 SUPERFAMILY SSF52540 6 223 1.78E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02290 c8a0ec540ff8ce83b70f05638fd8f9b2 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 35.218 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VAA_02290 c8a0ec540ff8ce83b70f05638fd8f9b2 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.2E-87 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VAA_02290 c8a0ec540ff8ce83b70f05638fd8f9b2 226 Gene3D G3DSA:3.40.50.300 1 226 1.1E-84 T 13-10-2018 VAA_03380 05d55ceb2557a9d48eb9fe813f030b71 209 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 4 204 1.8E-77 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VAA_03380 05d55ceb2557a9d48eb9fe813f030b71 209 SUPERFAMILY SSF52540 3 196 4.31E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03380 05d55ceb2557a9d48eb9fe813f030b71 209 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03380 05d55ceb2557a9d48eb9fe813f030b71 209 Gene3D G3DSA:3.40.50.300 1 199 2.1E-42 T 13-10-2018 VAA_03380 05d55ceb2557a9d48eb9fe813f030b71 209 Pfam PF00005 ABC transporter 21 160 1.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03380 05d55ceb2557a9d48eb9fe813f030b71 209 SMART SM00382 28 209 1.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 SUPERFAMILY SSF47323 316 459 1.03E-38 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 Gene3D G3DSA:3.40.50.620 1 305 9.1E-138 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.7E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.7E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.7E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.7E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 Gene3D G3DSA:1.20.120.640 306 460 6.5E-50 T 13-10-2018 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.8E-191 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.6E-142 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 SMART SM00840 341 402 3.3E-25 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 38.942 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 SUPERFAMILY SSF52374 1 313 3.22E-103 T 13-10-2018 VAA_03166 7c3e7a50aabef00be60da4ab8d54994d 460 Pfam PF09190 DALR domain 341 402 1.4E-23 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VAA_01664 e5a202531b6d392d5aaab6e4d1707d12 334 SUPERFAMILY SSF56601 32 334 2.49E-112 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_01664 e5a202531b6d392d5aaab6e4d1707d12 334 Hamap MF_00313 Glutaminase [glsA]. 32 334 46.408 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VAA_01664 e5a202531b6d392d5aaab6e4d1707d12 334 Pfam PF04960 Glutaminase 50 334 1.3E-111 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VAA_01664 e5a202531b6d392d5aaab6e4d1707d12 334 TIGRFAM TIGR03814 Gln_ase: glutaminase A 36 334 5.6E-129 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VAA_01664 e5a202531b6d392d5aaab6e4d1707d12 334 Gene3D G3DSA:3.40.710.10 31 334 1.7E-108 T 13-10-2018 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 Gene3D G3DSA:3.30.300.30 152 247 6.9E-10 T 13-10-2018 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 PIRSF PIRSF004862 28 580 2.6E-158 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 3.0E-56 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 9.9E-39 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 494 3.1E-73 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 9.4E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 9.4E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 9.4E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 9.4E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_03458 61f328dea09c2c09fb4375cc11197d0e 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 9.4E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VAA_01270 ac8941efa4d73840e707ac5765ca5973 166 Pfam PF11012 Protein of unknown function (DUF2850) 57 136 2.7E-32 T 13-10-2018 IPR021271 Protein of unknown function DUF2850 VAA_03746 303f460500b3d6795a799ffc1f073386 273 Pfam PF00149 Calcineurin-like phosphoesterase 14 204 1.5E-14 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_03746 303f460500b3d6795a799ffc1f073386 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 259 40.832 T 13-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VAA_03746 303f460500b3d6795a799ffc1f073386 273 SUPERFAMILY SSF56300 13 269 2.63E-56 T 13-10-2018 VAA_03746 303f460500b3d6795a799ffc1f073386 273 Gene3D G3DSA:3.60.21.10 3 269 1.3E-69 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_03746 303f460500b3d6795a799ffc1f073386 273 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 204 259 1.0E-20 T 13-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 Gene3D G3DSA:3.40.50.1370 135 292 1.3E-119 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.3E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.3E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.3E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.3E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 Gene3D G3DSA:3.40.50.1370 8 304 1.3E-119 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.3E-32 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.7E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.7E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.7E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.7E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.7E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.7E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.3E-45 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.6E-115 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.102 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02760 0a72eaee998147f8487e353d1a0b7a72 309 SUPERFAMILY SSF53671 3 307 8.25E-101 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:3.30.2090.10 182 274 2.8E-272 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 1.6E-244 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 SUPERFAMILY SSF82693 46 127 3.92E-20 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 SUPERFAMILY SSF82866 798 1037 7.59E-51 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 SUPERFAMILY SSF82693 138 328 7.06E-23 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 SUPERFAMILY SSF82866 294 499 1.06E-42 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 SUPERFAMILY SSF82714 185 269 2.09E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_02965 d86a1a50d200345319d00f39583f8833 1042 SUPERFAMILY SSF82714 716 800 1.29E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 8.3E-33 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:1.20.1640.10 509 1030 2.8E-272 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:3.30.70.1430 42 812 2.8E-272 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:3.30.70.1320 135 328 2.8E-272 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:3.30.70.1440 665 862 2.8E-272 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:3.30.70.1430 562 664 2.8E-272 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:1.20.1640.10 15 508 2.8E-272 T 13-10-2018 VAA_02965 d86a1a50d200345319d00f39583f8833 1042 Gene3D G3DSA:3.30.2090.10 716 804 2.8E-272 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VAA_02316 6de240b366284276e7eb65ed6c2ff451 137 Gene3D G3DSA:1.10.720.30 20 79 1.4E-26 T 13-10-2018 IPR036361 SAP domain superfamily VAA_02316 6de240b366284276e7eb65ed6c2ff451 137 Pfam PF09905 DNA-binding protein VF530 13 74 3.1E-31 T 13-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VAA_02989 c66b47ce475b2d84b104a15c89f808c0 321 SUPERFAMILY SSF103481 43 143 5.36E-11 T 13-10-2018 VAA_02989 c66b47ce475b2d84b104a15c89f808c0 321 Pfam PF00892 EamA-like transporter family 153 292 7.9E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_02989 c66b47ce475b2d84b104a15c89f808c0 321 Pfam PF00892 EamA-like transporter family 8 139 1.2E-8 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_02989 c66b47ce475b2d84b104a15c89f808c0 321 SUPERFAMILY SSF103481 211 292 1.83E-10 T 13-10-2018 VAA_01738 312813876b19c89216b4692aa78bac74 669 SUPERFAMILY SSF55073 240 393 1.96E-14 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01738 312813876b19c89216b4692aa78bac74 669 Gene3D G3DSA:3.30.70.270 219 393 9.1E-19 T 13-10-2018 VAA_01738 312813876b19c89216b4692aa78bac74 669 SMART SM00052 404 650 1.3E-20 T 13-10-2018 IPR001633 EAL domain VAA_01738 312813876b19c89216b4692aa78bac74 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 388 1.1E-16 T 13-10-2018 IPR000160 GGDEF domain VAA_01738 312813876b19c89216b4692aa78bac74 669 Gene3D G3DSA:3.20.20.450 405 653 5.5E-38 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01738 312813876b19c89216b4692aa78bac74 669 Pfam PF00563 EAL domain 440 644 6.0E-43 T 13-10-2018 IPR001633 EAL domain VAA_01738 312813876b19c89216b4692aa78bac74 669 SUPERFAMILY SSF141868 414 645 1.83E-39 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01738 312813876b19c89216b4692aa78bac74 669 SMART SM00267 223 393 1.9E-7 T 13-10-2018 IPR000160 GGDEF domain VAA_01738 312813876b19c89216b4692aa78bac74 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 46 141 3.9E-25 T 13-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VAA_03617 f218974c12005a5f6d8d57d93515570a 115 PIRSF PIRSF003113 2 112 7.8E-39 T 13-10-2018 IPR002634 BolA protein VAA_03617 f218974c12005a5f6d8d57d93515570a 115 Gene3D G3DSA:3.30.300.90 14 101 1.9E-35 T 13-10-2018 VAA_03617 f218974c12005a5f6d8d57d93515570a 115 SUPERFAMILY SSF82657 10 99 8.63E-33 T 13-10-2018 IPR036065 BolA-like superfamily VAA_03617 f218974c12005a5f6d8d57d93515570a 115 Pfam PF01722 BolA-like protein 23 96 1.5E-31 T 13-10-2018 IPR002634 BolA protein VAA_00396 3d43515962b703ce1fcfa28040fa5ffe 375 SUPERFAMILY SSF47413 4 69 5.63E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00396 3d43515962b703ce1fcfa28040fa5ffe 375 SMART SM00530 6 63 7.9E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00396 3d43515962b703ce1fcfa28040fa5ffe 375 Gene3D G3DSA:1.10.260.40 4 83 4.5E-10 T 13-10-2018 VAA_00396 3d43515962b703ce1fcfa28040fa5ffe 375 Pfam PF06114 IrrE N-terminal-like domain 154 266 4.2E-18 T 13-10-2018 IPR010359 IrrE N-terminal-like domain VAA_00396 3d43515962b703ce1fcfa28040fa5ffe 375 Pfam PF01381 Helix-turn-helix 7 62 9.9E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00878 5c5d8553b860f6764d42000415b32726 421 SUPERFAMILY SSF110849 117 184 8.63E-7 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VAA_01787 6390a02ae54fed8b977d77140120e787 459 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 Pfam PF01235 Sodium:alanine symporter family 54 448 1.7E-138 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 2.7E-154 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 PRINTS PR00175 Sodium/alanine symporter signature 212 231 1.6E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 PRINTS PR00175 Sodium/alanine symporter signature 184 202 1.6E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 PRINTS PR00175 Sodium/alanine symporter signature 412 432 1.6E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.6E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 PRINTS PR00175 Sodium/alanine symporter signature 92 114 1.6E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_01787 6390a02ae54fed8b977d77140120e787 459 PRINTS PR00175 Sodium/alanine symporter signature 307 325 1.6E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 SUPERFAMILY SSF55307 204 320 9.39E-43 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 SMART SM00865 207 325 8.0E-56 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.9E-36 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 7.3E-135 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 Gene3D G3DSA:3.40.50.1440 5 220 3.9E-79 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 SUPERFAMILY SSF52490 13 208 8.37E-69 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.0E-39 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.0E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.0E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.0E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.0E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 SMART SM00864 13 205 7.0E-113 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 Gene3D G3DSA:3.30.1330.20 221 327 1.5E-34 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VAA_03711 69be2e638781e2f34d039e030d93e3bf 405 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 362 38.119 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VAA_01607 8bf8a92e64ac2f7ae9e70c240c5c1fdf 263 Gene3D G3DSA:3.20.20.450 20 262 9.0E-42 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01607 8bf8a92e64ac2f7ae9e70c240c5c1fdf 263 SUPERFAMILY SSF141868 30 254 1.44E-40 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01607 8bf8a92e64ac2f7ae9e70c240c5c1fdf 263 Pfam PF00563 EAL domain 30 252 3.3E-42 T 13-10-2018 IPR001633 EAL domain VAA_01607 8bf8a92e64ac2f7ae9e70c240c5c1fdf 263 SMART SM00052 11 255 4.1E-12 T 13-10-2018 IPR001633 EAL domain VAA_02701 1212afa9734045c7f5b1f2e36d1365ea 591 Pfam PF13444 Acetyltransferase (GNAT) domain 332 432 8.7E-19 T 13-10-2018 VAA_02701 1212afa9734045c7f5b1f2e36d1365ea 591 SUPERFAMILY SSF69593 45 254 2.09E-12 T 13-10-2018 VAA_02701 1212afa9734045c7f5b1f2e36d1365ea 591 SMART SM00563 76 199 1.2E-9 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_02701 1212afa9734045c7f5b1f2e36d1365ea 591 SUPERFAMILY SSF55729 314 461 4.61E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02701 1212afa9734045c7f5b1f2e36d1365ea 591 Pfam PF01553 Acyltransferase 67 196 2.3E-5 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_02701 1212afa9734045c7f5b1f2e36d1365ea 591 Gene3D G3DSA:3.40.630.30 314 473 6.1E-8 T 13-10-2018 VAA_00813 4531231eca630a58d7f0fb9c6a6a9e4d 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAA_00813 4531231eca630a58d7f0fb9c6a6a9e4d 337 Pfam PF01136 Peptidase family U32 75 336 2.0E-67 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAA_03415 5ca006d824564fd77faeebee544521db 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 3.8E-40 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03415 5ca006d824564fd77faeebee544521db 130 PIRSF PIRSF000178 2 130 2.4E-32 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03415 5ca006d824564fd77faeebee544521db 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03415 5ca006d824564fd77faeebee544521db 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03415 5ca006d824564fd77faeebee544521db 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.3E-28 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03415 5ca006d824564fd77faeebee544521db 130 Gene3D G3DSA:1.20.1300.10 5 130 7.6E-43 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03415 5ca006d824564fd77faeebee544521db 130 SUPERFAMILY SSF81343 8 130 2.29E-33 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_04286 d5db99ac4c493e723e0cd7f3c0ab9dc9 396 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 312 3.4E-79 T 13-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 Gene3D G3DSA:3.90.1150.10 30 442 1.5E-178 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 Gene3D G3DSA:3.40.640.10 92 340 1.5E-178 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 26 449 104.891 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 Pfam PF00202 Aminotransferase class-III 56 418 7.6E-75 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 SUPERFAMILY SSF53383 23 446 1.67E-133 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 26 447 4.8E-194 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VAA_00785 cd1cac34c159f45d6b9b67ffa09b8042 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 293 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_02737 d165e61bc0f636e79469a7747ca0e9ec 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 2.0E-37 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02737 d165e61bc0f636e79469a7747ca0e9ec 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 147 3.9E-53 T 13-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VAA_02737 d165e61bc0f636e79469a7747ca0e9ec 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02737 d165e61bc0f636e79469a7747ca0e9ec 148 Gene3D G3DSA:3.40.930.10 1 148 6.0E-53 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02737 d165e61bc0f636e79469a7747ca0e9ec 148 SUPERFAMILY SSF55804 1 147 1.57E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_00661 18e854188d7858e25cad1a4735cfe649 304 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 12 287 23.717 T 13-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VAA_00661 18e854188d7858e25cad1a4735cfe649 304 PIRSF PIRSF035875 2 289 3.1E-52 T 13-10-2018 IPR017039 Virulence factor BrkB VAA_00661 18e854188d7858e25cad1a4735cfe649 304 Pfam PF03631 Virulence factor BrkB 24 270 1.3E-59 T 13-10-2018 IPR017039 Virulence factor BrkB VAA_00661 18e854188d7858e25cad1a4735cfe649 304 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 13 270 7.7E-81 T 13-10-2018 IPR017039 Virulence factor BrkB VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 1.3E-25 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 SUPERFAMILY SSF50129 4 193 3.1E-72 T 13-10-2018 IPR011032 GroES-like superfamily VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 Gene3D G3DSA:3.90.180.10 12 370 4.4E-152 T 13-10-2018 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 Gene3D G3DSA:3.40.50.720 180 318 4.4E-152 T 13-10-2018 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 SMART SM00829 16 373 0.0011 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 Pfam PF00107 Zinc-binding dehydrogenase 203 324 3.1E-24 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 4.9E-224 T 13-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 SUPERFAMILY SSF51735 166 339 9.49E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VAA_01187 fcedd05359c5a3c2cadb5965415dcfde 377 SUPERFAMILY SSF50129 324 375 1.6E-11 T 13-10-2018 IPR011032 GroES-like superfamily VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 SUPERFAMILY SSF117457 337 506 5.49E-63 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 30 301 2.1E-62 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 Pfam PF05681 Fumarate hydratase (Fumerase) 29 302 1.1E-98 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 PIRSF PIRSF001394 11 524 5.8E-216 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 342 505 3.6E-50 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 Pfam PF05683 Fumarase C-terminus 306 507 2.9E-82 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VAA_01430 bfd90bdf5f96ff87ec5f547629050f0c 524 Gene3D G3DSA:3.20.130.10 325 507 1.0E-61 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VAA_00224 504dad36e16c1aa46625a6c65bcf16ce 76 Gene3D G3DSA:1.20.1280.100 1 73 1.4E-38 T 13-10-2018 VAA_00224 504dad36e16c1aa46625a6c65bcf16ce 76 Pfam PF09016 Pas factor saposin fold 1 76 3.0E-44 T 13-10-2018 IPR015106 Pas factor saposin domain VAA_01345 3a1e164f8e81ea80f6d31895dfd8fb64 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 408 4.3E-48 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01345 3a1e164f8e81ea80f6d31895dfd8fb64 448 PIRSF PIRSF006603 2 448 5.0E-88 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01345 3a1e164f8e81ea80f6d31895dfd8fb64 448 Pfam PF01554 MatE 26 186 1.4E-20 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01345 3a1e164f8e81ea80f6d31895dfd8fb64 448 Pfam PF01554 MatE 245 402 1.3E-15 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02342 4c628e91d01c6fafe383dfa8172437e3 274 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 1.0E-74 T 13-10-2018 IPR021372 Protein of unknown function DUF2989 VAA_01717 fcd54d22265a8ee68d7401fda5b97b10 196 PIRSF PIRSF006305 7 196 1.5E-57 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_01717 fcd54d22265a8ee68d7401fda5b97b10 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 12 192 3.8E-56 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_01717 fcd54d22265a8ee68d7401fda5b97b10 196 SUPERFAMILY SSF52972 12 194 1.05E-61 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_01717 fcd54d22265a8ee68d7401fda5b97b10 196 Pfam PF02545 Maf-like protein 13 194 4.5E-61 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_01717 fcd54d22265a8ee68d7401fda5b97b10 196 Hamap MF_00528 Septum formation protein Maf [maf]. 13 196 29.143 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_01717 fcd54d22265a8ee68d7401fda5b97b10 196 Gene3D G3DSA:3.90.950.10 12 196 6.6E-70 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_00716 bfe72445d484ff74c959d011166f2f09 179 PIRSF PIRSF006160 8 169 1.3E-64 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 84 102 8.3E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 128 147 8.3E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 56 74 8.3E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 35 53 8.3E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 12 30 8.3E-50 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 11 161 1.5E-59 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 16 161 1.0E-74 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 Gene3D G3DSA:3.30.1360.80 8 179 2.4E-70 T 13-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 8 166 34.2 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VAA_00716 bfe72445d484ff74c959d011166f2f09 179 SUPERFAMILY SSF63411 11 169 1.47E-63 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_03294 85614dd026b89bec23fb67dac3f352dc 217 Gene3D G3DSA:1.25.40.10 36 216 2.5E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03294 85614dd026b89bec23fb67dac3f352dc 217 SUPERFAMILY SSF48452 43 186 2.66E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02584 c7628db15620ff83e3e2c65252615281 500 Gene3D G3DSA:3.40.50.720 246 500 9.0E-82 T 13-10-2018 VAA_02584 c7628db15620ff83e3e2c65252615281 500 SMART SM01274 103 236 4.0E-73 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAA_02584 c7628db15620ff83e3e2c65252615281 500 SMART SM00919 248 484 3.6E-139 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAA_02584 c7628db15620ff83e3e2c65252615281 500 Pfam PF00390 Malic enzyme, N-terminal domain 105 235 2.9E-27 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VAA_02584 c7628db15620ff83e3e2c65252615281 500 Pfam PF03949 Malic enzyme, NAD binding domain 250 444 2.0E-25 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VAA_02584 c7628db15620ff83e3e2c65252615281 500 Gene3D G3DSA:3.40.50.10380 81 245 1.8E-65 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VAA_02584 c7628db15620ff83e3e2c65252615281 500 SUPERFAMILY SSF53223 95 246 1.37E-51 T 13-10-2018 VAA_02584 c7628db15620ff83e3e2c65252615281 500 PIRSF PIRSF000106 124 500 7.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VAA_02584 c7628db15620ff83e3e2c65252615281 500 SUPERFAMILY SSF51735 248 493 2.8E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02584 c7628db15620ff83e3e2c65252615281 500 ProSitePatterns PS00331 Malic enzymes signature. 244 260 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VAA_03760 2c6aa1294d6f984fbbee2f466c1abc9e 242 Pfam PF08239 Bacterial SH3 domain 71 121 9.3E-10 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type VAA_03760 2c6aa1294d6f984fbbee2f466c1abc9e 242 SMART SM00287 59 125 7.1E-11 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type VAA_03760 2c6aa1294d6f984fbbee2f466c1abc9e 242 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 63 241 4.6E-54 T 13-10-2018 IPR016476 SH3 domain protein VAA_03760 2c6aa1294d6f984fbbee2f466c1abc9e 242 PIRSF PIRSF006158 35 242 8.1E-71 T 13-10-2018 IPR016476 SH3 domain protein VAA_03760 2c6aa1294d6f984fbbee2f466c1abc9e 242 Gene3D G3DSA:2.30.30.40 69 125 1.6E-8 T 13-10-2018 VAA_02224 9e45045a1e854612a855c12568d33f75 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.0E-216 T 13-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VAA_02224 9e45045a1e854612a855c12568d33f75 367 Pfam PF01259 SAICAR synthetase 22 293 3.3E-45 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAA_02224 9e45045a1e854612a855c12568d33f75 367 Gene3D G3DSA:3.30.200.20 9 128 4.5E-19 T 13-10-2018 VAA_02224 9e45045a1e854612a855c12568d33f75 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAA_02224 9e45045a1e854612a855c12568d33f75 367 Gene3D G3DSA:3.30.470.20 129 284 7.6E-37 T 13-10-2018 VAA_02224 9e45045a1e854612a855c12568d33f75 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.436 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VAA_02224 9e45045a1e854612a855c12568d33f75 367 SUPERFAMILY SSF56104 14 344 3.92E-64 T 13-10-2018 VAA_02359 0ec5282038a579e655d5a4b7e9c61dbe 182 PIRSF PIRSF000232 1 182 1.3E-59 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VAA_02359 0ec5282038a579e655d5a4b7e9c61dbe 182 Pfam PF00881 Nitroreductase family 8 161 3.8E-23 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VAA_02359 0ec5282038a579e655d5a4b7e9c61dbe 182 Gene3D G3DSA:3.40.109.10 1 182 2.7E-39 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAA_02359 0ec5282038a579e655d5a4b7e9c61dbe 182 SUPERFAMILY SSF55469 1 181 4.58E-40 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 SUPERFAMILY SSF53955 43 256 1.8E-78 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 Gene3D G3DSA:1.10.3810.10 48 245 4.7E-79 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 Pfam PF00905 Penicillin binding protein transpeptidase domain 440 712 8.0E-30 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 Pfam PF17092 Penicillin-binding protein OB-like domain 317 437 1.9E-27 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 764 5.7E-173 T 13-10-2018 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 Gene3D G3DSA:3.40.710.10 250 320 2.6E-6 T 13-10-2018 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 Gene3D G3DSA:2.40.50.140 321 420 2.8E-29 T 13-10-2018 VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 SUPERFAMILY SSF56601 211 815 3.38E-116 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_02627 5e2b21f22bbce88a335bfad9c37d68fc 832 Pfam PF00912 Transglycosylase 55 229 2.6E-64 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_01325 21a9b750501a8f1d60859474c97af31d 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 49 181 4.7E-36 T 13-10-2018 IPR005247 YbhB/YbcL VAA_01325 21a9b750501a8f1d60859474c97af31d 183 Gene3D G3DSA:3.90.280.10 16 183 5.9E-50 T 13-10-2018 IPR036610 PEBP-like superfamily VAA_01325 21a9b750501a8f1d60859474c97af31d 183 SUPERFAMILY SSF49777 28 183 1.83E-47 T 13-10-2018 IPR036610 PEBP-like superfamily VAA_01325 21a9b750501a8f1d60859474c97af31d 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 53 181 4.7E-34 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VAA_03110 0068d50445cf340370ec3ba197a580c3 160 Gene3D G3DSA:3.40.630.30 1 160 5.0E-28 T 13-10-2018 VAA_03110 0068d50445cf340370ec3ba197a580c3 160 Pfam PF00583 Acetyltransferase (GNAT) family 39 137 2.9E-13 T 13-10-2018 IPR000182 GNAT domain VAA_03110 0068d50445cf340370ec3ba197a580c3 160 SUPERFAMILY SSF55729 1 159 1.49E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00696 397169d076f06f3930f5bbca398fe205 327 Pfam PF04542 Sigma-70 region 2 94 157 2.5E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 SUPERFAMILY SSF88659 161 234 2.09E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_00696 397169d076f06f3930f5bbca398fe205 327 Pfam PF00140 Sigma-70 factor, region 1.2 56 89 1.4E-11 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00696 397169d076f06f3930f5bbca398fe205 327 Pfam PF04539 Sigma-70 region 3 168 241 7.1E-22 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 Pfam PF04545 Sigma-70, region 4 256 309 1.3E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 9 322 37.781 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00696 397169d076f06f3930f5bbca398fe205 327 Gene3D G3DSA:1.10.10.10 238 318 9.7E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00696 397169d076f06f3930f5bbca398fe205 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 322 4.5E-132 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VAA_00696 397169d076f06f3930f5bbca398fe205 327 Gene3D G3DSA:1.10.10.10 161 236 8.6E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00696 397169d076f06f3930f5bbca398fe205 327 PRINTS PR00046 Major sigma-70 factor signature 112 125 1.4E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 PRINTS PR00046 Major sigma-70 factor signature 260 272 1.4E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 PRINTS PR00046 Major sigma-70 factor signature 296 307 1.4E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 PRINTS PR00046 Major sigma-70 factor signature 136 144 1.4E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 PRINTS PR00046 Major sigma-70 factor signature 281 296 1.4E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 SUPERFAMILY SSF88659 218 317 1.6E-25 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_00696 397169d076f06f3930f5bbca398fe205 327 SUPERFAMILY SSF88946 55 158 1.4E-38 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 311 2.4E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_00696 397169d076f06f3930f5bbca398fe205 327 Gene3D G3DSA:1.10.601.10 2 157 1.0E-39 T 13-10-2018 VAA_00696 397169d076f06f3930f5bbca398fe205 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 281 307 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VAA_01668 737c0dbd52f72c4ed9bfa2d46612638b 376 Pfam PF01464 Transglycosylase SLT domain 212 335 1.3E-29 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VAA_01668 737c0dbd52f72c4ed9bfa2d46612638b 376 Gene3D G3DSA:1.10.530.10 190 370 2.2E-50 T 13-10-2018 VAA_01668 737c0dbd52f72c4ed9bfa2d46612638b 376 Pfam PF11873 Domain of unknown function (DUF3393) 4 206 3.2E-78 T 13-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VAA_01668 737c0dbd52f72c4ed9bfa2d46612638b 376 SUPERFAMILY SSF53955 188 370 6.76E-37 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VAA_01668 737c0dbd52f72c4ed9bfa2d46612638b 376 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VAA_02738 011289a010acece6b98e4730bf98dcae 95 Gene3D G3DSA:3.30.160.100 1 95 1.9E-37 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAA_02738 011289a010acece6b98e4730bf98dcae 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.5E-26 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAA_02738 011289a010acece6b98e4730bf98dcae 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.8E-31 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAA_02738 011289a010acece6b98e4730bf98dcae 95 SUPERFAMILY SSF69754 1 95 4.19E-33 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAA_03108 131cc6e6e3390c56bb4819c366674026 215 Pfam PF01409 tRNA synthetases class II core domain (F) 2 214 8.1E-98 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VAA_03108 131cc6e6e3390c56bb4819c366674026 215 SUPERFAMILY SSF55681 2 215 1.17E-76 T 13-10-2018 VAA_03108 131cc6e6e3390c56bb4819c366674026 215 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 2 215 1.5E-93 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VAA_03108 131cc6e6e3390c56bb4819c366674026 215 Gene3D G3DSA:3.30.930.10 1 215 3.9E-99 T 13-10-2018 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 Gene3D G3DSA:3.40.50.300 17 235 1.2E-69 T 13-10-2018 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 Gene3D G3DSA:2.40.50.140 299 320 2.2E-11 T 13-10-2018 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 SMART SM00382 42 225 1.4E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 SUPERFAMILY SSF50331 250 373 3.17E-9 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 Gene3D G3DSA:2.40.50.940 236 298 2.2E-11 T 13-10-2018 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 SUPERFAMILY SSF52540 18 257 4.23E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 Pfam PF00005 ABC transporter 35 174 1.0E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 3.4E-156 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VAA_01835 938dc54bd678c5928a3d3e51dbad75dd 378 Pfam PF08402 TOBE domain 292 372 1.6E-10 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VAA_02911 bb1e44082963158e8b7c376fe02f7d23 495 SMART SM00028 207 240 0.16 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02911 bb1e44082963158e8b7c376fe02f7d23 495 SMART SM00028 127 160 130.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_02911 bb1e44082963158e8b7c376fe02f7d23 495 Gene3D G3DSA:1.25.40.10 173 317 1.6E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02911 bb1e44082963158e8b7c376fe02f7d23 495 Gene3D G3DSA:1.25.40.10 2 172 6.4E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02911 bb1e44082963158e8b7c376fe02f7d23 495 SUPERFAMILY SSF48452 123 315 2.66E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 Gene3D G3DSA:3.30.70.1560 132 205 1.4E-53 T 13-10-2018 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 SUPERFAMILY SSF55174 6 98 3.36E-15 T 13-10-2018 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 8.7E-48 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 Pfam PF01479 S4 domain 8 52 2.7E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 SMART SM00363 7 64 1.1E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 Gene3D G3DSA:3.30.70.580 68 227 1.4E-53 T 13-10-2018 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 Pfam PF00849 RNA pseudouridylate synthase 67 193 2.2E-13 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 Gene3D G3DSA:3.10.290.10 1 61 3.0E-22 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_03541 b9fce84aa655cd540f05ac4a083e0890 325 SUPERFAMILY SSF55120 66 227 2.76E-38 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02069 636e03cb66d3cc5ab3580963276a4993 211 Pfam PF00691 OmpA family 91 186 5.9E-15 T 13-10-2018 IPR006665 OmpA-like domain VAA_02069 636e03cb66d3cc5ab3580963276a4993 211 SUPERFAMILY SSF103088 62 191 8.37E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_02069 636e03cb66d3cc5ab3580963276a4993 211 PRINTS PR01021 OMPA domain signature 122 137 5.7E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_02069 636e03cb66d3cc5ab3580963276a4993 211 PRINTS PR01021 OMPA domain signature 137 153 5.7E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_02069 636e03cb66d3cc5ab3580963276a4993 211 PRINTS PR01021 OMPA domain signature 92 114 5.7E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_02069 636e03cb66d3cc5ab3580963276a4993 211 Gene3D G3DSA:3.30.1330.60 63 198 1.7E-25 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 Pfam PF00072 Response regulator receiver domain 7 117 2.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 SUPERFAMILY SSF52172 3 127 1.1E-40 T 13-10-2018 IPR011006 CheY-like superfamily VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 Gene3D G3DSA:3.40.50.2300 1 125 6.8E-39 T 13-10-2018 VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 SUPERFAMILY SSF46894 132 234 5.67E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 6.4E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 SMART SM00862 156 232 3.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 Gene3D G3DSA:1.10.10.10 130 239 4.9E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00624 24cd53cc22dbcf2b03ff0d9bb1b18d16 239 SMART SM00448 5 116 5.9E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01206 f25b5ea5db6dc92e5772d8936a8cd24f 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 3.6E-29 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VAA_01206 f25b5ea5db6dc92e5772d8936a8cd24f 143 Gene3D G3DSA:3.30.530.20 1 143 4.6E-36 T 13-10-2018 IPR023393 START-like domain superfamily VAA_01206 f25b5ea5db6dc92e5772d8936a8cd24f 143 SUPERFAMILY SSF55961 1 142 2.96E-32 T 13-10-2018 VAA_00993 1d615e1c23ac3bf08358873585accc3b 330 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 4.3E-30 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 VAA_03039 c6e485e7422223e897d31065be651741 176 Gene3D G3DSA:2.30.110.20 1 174 4.3E-23 T 13-10-2018 IPR036624 Hcp1-like superfamily VAA_03039 c6e485e7422223e897d31065be651741 176 SUPERFAMILY SSF141452 1 171 2.35E-30 T 13-10-2018 IPR036624 Hcp1-like superfamily VAA_03039 c6e485e7422223e897d31065be651741 176 Pfam PF05638 Type VI secretion system effector, Hcp 5 148 8.5E-27 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 Pfam PF03466 LysR substrate binding domain 86 297 9.8E-9 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 Gene3D G3DSA:1.10.10.10 2 84 3.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 Gene3D G3DSA:3.40.190.10 166 258 1.2E-9 T 13-10-2018 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 SUPERFAMILY SSF53850 86 295 4.5E-16 T 13-10-2018 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 3.9E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 Gene3D G3DSA:3.40.190.10 96 165 1.2E-9 T 13-10-2018 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 6.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 6.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 6.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02895 34dbc6dff11e1bd32d41953c096b344a 305 SUPERFAMILY SSF46785 4 86 3.75E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00499 992c9a9af6d37d68be39cf8929815bf7 285 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 2.9E-92 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VAA_00499 992c9a9af6d37d68be39cf8929815bf7 285 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 20 277 1.4E-99 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VAA_00499 992c9a9af6d37d68be39cf8929815bf7 285 Gene3D G3DSA:3.40.1190.20 2 284 8.6E-99 T 13-10-2018 IPR029056 Ribokinase-like VAA_00499 992c9a9af6d37d68be39cf8929815bf7 285 SUPERFAMILY SSF53613 16 278 5.3E-79 T 13-10-2018 IPR029056 Ribokinase-like VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 Gene3D G3DSA:1.20.81.30 256 369 1.2E-28 T 13-10-2018 VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 7.0E-30 T 13-10-2018 IPR018076 Type II secretion system F domain VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.4E-26 T 13-10-2018 IPR018076 Type II secretion system F domain VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 1.1E-8 T 13-10-2018 IPR003004 GspF/PilC family VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 1.1E-8 T 13-10-2018 IPR003004 GspF/PilC family VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 1.1E-8 T 13-10-2018 IPR003004 GspF/PilC family VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 1.1E-8 T 13-10-2018 IPR003004 GspF/PilC family VAA_01729 a05ea3db4563bb9c6e7af8e99d961a9a 405 Gene3D G3DSA:1.20.81.30 58 175 1.0E-31 T 13-10-2018 VAA_01383 236f38a0f79440fc9612c1b500052265 260 SMART SM00382 31 220 1.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01383 236f38a0f79440fc9612c1b500052265 260 SUPERFAMILY SSF52540 5 240 2.2E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01383 236f38a0f79440fc9612c1b500052265 260 Gene3D G3DSA:3.40.50.300 1 258 2.2E-62 T 13-10-2018 VAA_01383 236f38a0f79440fc9612c1b500052265 260 Pfam PF00005 ABC transporter 22 171 2.7E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 SUPERFAMILY SSF52172 4 117 1.57E-28 T 13-10-2018 IPR011006 CheY-like superfamily VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 SMART SM00862 146 217 1.7E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 SUPERFAMILY SSF46894 122 217 1.84E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 Pfam PF00072 Response regulator receiver domain 6 112 3.3E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 SMART SM00448 3 111 3.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 Gene3D G3DSA:3.40.50.2300 1 120 1.8E-29 T 13-10-2018 VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 Gene3D G3DSA:1.10.10.10 126 219 1.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_04288 ee67649dc9715914b0a4d5588f803c4e 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 1.2E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 Gene3D G3DSA:3.40.50.300 47 203 1.5E-11 T 13-10-2018 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 502 2.6E-10 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 Gene3D G3DSA:3.30.230.10 290 533 2.0E-92 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.0E-11 T 13-10-2018 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.0E-11 T 13-10-2018 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.0E-11 T 13-10-2018 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.0E-11 T 13-10-2018 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 Pfam PF13654 AAA domain 88 288 1.2E-22 T 13-10-2018 VAA_1856 65227f79a894b0b089d7b342ca1c5723 547 SUPERFAMILY SSF54211 314 506 5.69E-35 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_03324 f054ab4453569efa107b65e2843cd10c 370 Gene3D G3DSA:3.40.1750.20 223 287 6.7E-45 T 13-10-2018 VAA_03324 f054ab4453569efa107b65e2843cd10c 370 Pfam PF08496 Peptidase family S49 N-terminal 19 179 3.8E-56 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VAA_03324 f054ab4453569efa107b65e2843cd10c 370 Gene3D G3DSA:3.90.226.10 126 323 6.7E-45 T 13-10-2018 VAA_03324 f054ab4453569efa107b65e2843cd10c 370 Pfam PF01343 Peptidase family S49 183 331 6.2E-48 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VAA_03324 f054ab4453569efa107b65e2843cd10c 370 SUPERFAMILY SSF52096 120 320 2.93E-30 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_03082 6fb0ef086e19fba1b25c43449df9a449 189 PIRSF PIRSF006135 1 182 1.6E-51 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VAA_03082 6fb0ef086e19fba1b25c43449df9a449 189 SUPERFAMILY SSF52540 2 181 4.43E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03082 6fb0ef086e19fba1b25c43449df9a449 189 Gene3D G3DSA:3.40.50.300 2 181 1.4E-56 T 13-10-2018 VAA_03082 6fb0ef086e19fba1b25c43449df9a449 189 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 179 1.6E-56 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VAA_02282 67e10d17a5d1c405c5a9f026a090c795 405 Pfam PF13679 Methyltransferase domain 115 238 2.6E-15 T 13-10-2018 IPR025714 Methyltransferase domain VAA_02282 67e10d17a5d1c405c5a9f026a090c795 405 SUPERFAMILY SSF53335 103 190 4.96E-7 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02282 67e10d17a5d1c405c5a9f026a090c795 405 Gene3D G3DSA:3.40.50.150 110 210 3.5E-5 T 13-10-2018 VAA_01413 b5efa0a0dbe3c7ca91a1c99ac7213262 103 Gene3D G3DSA:3.30.750.24 2 95 1.5E-10 T 13-10-2018 IPR036513 STAS domain superfamily VAA_01413 b5efa0a0dbe3c7ca91a1c99ac7213262 103 Pfam PF13466 STAS domain 13 89 1.6E-12 T 13-10-2018 IPR002645 STAS domain VAA_01413 b5efa0a0dbe3c7ca91a1c99ac7213262 103 SUPERFAMILY SSF52091 5 94 8.44E-13 T 13-10-2018 IPR036513 STAS domain superfamily VAA_02959 9d37fdb67f2ec06a858b515bff0c4db2 55 SUPERFAMILY SSF56821 7 52 2.93E-14 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 VAA_02959 9d37fdb67f2ec06a858b515bff0c4db2 55 Pfam PF03063 Prismane/CO dehydrogenase family 6 52 1.4E-12 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VAA_02959 9d37fdb67f2ec06a858b515bff0c4db2 55 Gene3D G3DSA:3.40.50.2030 2 55 8.7E-12 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VAA_00763 337d40edcf23ae81e0947349a32fe968 421 Pfam PF02447 GntP family permease 9 414 1.4E-22 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 Gene3D G3DSA:3.30.70.360 212 322 1.5E-172 T 13-10-2018 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 TIGRFAM TIGR01882 peptidase-T: peptidase T 5 407 3.2E-160 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 Pfam PF07687 Peptidase dimerisation domain 209 309 5.9E-10 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 SUPERFAMILY SSF53187 4 406 4.45E-79 T 13-10-2018 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 Hamap MF_00550 Peptidase T [pepT]. 4 407 56.164 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 PIRSF PIRSF037215 2 411 1.0E-181 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 Pfam PF01546 Peptidase family M20/M25/M40 142 405 4.1E-12 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 Gene3D G3DSA:3.40.630.10 7 403 1.5E-172 T 13-10-2018 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 SUPERFAMILY SSF55031 212 322 1.26E-39 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 141 180 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAA_00969 ad9719a1eccf7e0665bd0c16ef0e9616 413 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 Gene3D G3DSA:3.40.50.300 13 225 5.7E-42 T 13-10-2018 VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 Gene3D G3DSA:3.40.50.300 227 525 8.5E-30 T 13-10-2018 VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 Pfam PF13361 UvrD-like helicase C-terminal domain 418 518 1.1E-13 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 Gene3D G3DSA:1.10.486.10 332 461 8.5E-30 T 13-10-2018 VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 SUPERFAMILY SSF52540 21 524 3.46E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 Pfam PF13361 UvrD-like helicase C-terminal domain 225 370 1.2E-8 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VAA_00671 781eda20595d1aef72bd4a80f48e5aa2 548 Pfam PF13245 AAA domain 25 201 2.3E-20 T 13-10-2018 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 Pfam PF01416 tRNA pseudouridine synthase 168 268 1.9E-27 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 Pfam PF01416 tRNA pseudouridine synthase 32 126 9.9E-8 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 Gene3D G3DSA:3.30.70.660 129 266 7.2E-50 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 26 262 4.6E-76 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 SUPERFAMILY SSF55120 23 279 8.34E-95 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 Gene3D G3DSA:3.30.70.580 22 128 1.0E-39 T 13-10-2018 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 25 267 34.58 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02097 d321df9ecf0aae1de8940bdb0fc849c0 288 PIRSF PIRSF001430 24 281 6.9E-76 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 Gene3D G3DSA:3.40.50.1980 30 229 4.9E-125 T 13-10-2018 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 Gene3D G3DSA:3.40.50.1980 231 346 4.9E-125 T 13-10-2018 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.6E-100 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 PIRSF PIRSF000099 1 427 7.4E-169 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 Pfam PF00815 Histidinol dehydrogenase 26 424 1.3E-169 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.925 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 SUPERFAMILY SSF53720 4 424 3.14E-92 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VAA_02199 5ebae3e3c6ba17f5ae6377ed815ff913 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.1E-164 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.725 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 Gene3D G3DSA:1.10.3930.10 68 148 1.4E-145 T 13-10-2018 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.1E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.1E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.1E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.1E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.1E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.1E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 9.2E-171 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 Gene3D G3DSA:3.75.10.10 6 403 1.4E-145 T 13-10-2018 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 SUPERFAMILY SSF55909 3 406 1.96E-126 T 13-10-2018 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 PIRSF PIRSF006356 1 406 6.4E-154 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_01711 af149ead25f05ab44a8574618e962ca4 406 Pfam PF02274 Amidinotransferase 18 403 1.1E-110 T 13-10-2018 VAA_02970 e673439b7773079ed75fe1268dd5990c 206 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 143 171 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAA_02970 e673439b7773079ed75fe1268dd5990c 206 SMART SM01266 11 63 5.9E-5 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VAA_02970 e673439b7773079ed75fe1268dd5990c 206 SUPERFAMILY SSF51161 7 189 1.05E-44 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_02970 e673439b7773079ed75fe1268dd5990c 206 Pfam PF12464 Maltose acetyltransferase 13 57 5.4E-7 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VAA_02970 e673439b7773079ed75fe1268dd5990c 206 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 134 168 6.1E-8 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02970 e673439b7773079ed75fe1268dd5990c 206 Gene3D G3DSA:2.160.10.10 4 194 1.6E-64 T 13-10-2018 VAA_01676 9a497d0a31ef5b9440fa5b6de47fad8f 271 SUPERFAMILY SSF56300 4 255 3.38E-54 T 13-10-2018 VAA_01676 9a497d0a31ef5b9440fa5b6de47fad8f 271 PIRSF PIRSF000903 1 271 1.8E-119 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VAA_01676 9a497d0a31ef5b9440fa5b6de47fad8f 271 Pfam PF00149 Calcineurin-like phosphoesterase 5 151 3.6E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_01676 9a497d0a31ef5b9440fa5b6de47fad8f 271 Gene3D G3DSA:3.60.21.10 2 270 1.2E-75 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_01676 9a497d0a31ef5b9440fa5b6de47fad8f 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 48.169 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VAA_01676 9a497d0a31ef5b9440fa5b6de47fad8f 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 270 1.9E-120 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VAA_02972 a0f866126ed59acd7ada33be9ecdcd4b 298 SUPERFAMILY SSF161111 7 214 1.18E-35 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAA_02972 a0f866126ed59acd7ada33be9ecdcd4b 298 Gene3D G3DSA:1.20.1510.10 9 214 7.9E-24 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VAA_02972 a0f866126ed59acd7ada33be9ecdcd4b 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 270 7.0E-29 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAA_02972 a0f866126ed59acd7ada33be9ecdcd4b 298 Pfam PF01545 Cation efflux family 13 214 2.2E-36 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 2.0E-28 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 PIRSF PIRSF006250 16 295 9.6E-101 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 SUPERFAMILY SSF54675 13 128 4.71E-34 T 13-10-2018 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 Gene3D G3DSA:3.90.1170.20 21 293 7.9E-125 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.7E-56 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 SUPERFAMILY SSF51690 130 294 1.1E-58 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 Gene3D G3DSA:3.20.20.70 138 284 7.9E-125 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00733 66d8b5e568038f8518cf14effeed7d8f 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 3.8E-94 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VAA_01151 7174d519f1578ef9c2523e8de8cf554f 185 Gene3D G3DSA:3.40.1580.20 5 185 8.8E-67 T 13-10-2018 IPR038228 Syd superfamily VAA_01151 7174d519f1578ef9c2523e8de8cf554f 185 Hamap MF_01104 Protein Syd [syd]. 7 185 36.481 T 13-10-2018 IPR009948 Syd GO:0009898 VAA_01151 7174d519f1578ef9c2523e8de8cf554f 185 Pfam PF07348 Syd protein (SUKH-2) 11 183 1.9E-69 T 13-10-2018 IPR009948 Syd GO:0009898 VAA_02607 cfca4eda5a45d09e89707508b3990700 127 PIRSF PIRSF000180 1 127 1.8E-57 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAA_02607 cfca4eda5a45d09e89707508b3990700 127 Gene3D G3DSA:1.20.1300.10 1 127 7.8E-48 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02607 cfca4eda5a45d09e89707508b3990700 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.302 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAA_02607 cfca4eda5a45d09e89707508b3990700 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-47 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAA_02607 cfca4eda5a45d09e89707508b3990700 127 SUPERFAMILY SSF81343 1 127 1.59E-53 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02607 cfca4eda5a45d09e89707508b3990700 127 Pfam PF02300 Fumarate reductase subunit C 2 127 5.8E-50 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VAA_01351 4397f7e42bbbdf0b7bb5d8956e2760f1 172 SUPERFAMILY SSF48452 3 114 9.77E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01410 d3f5a66e00e79d4693b1027388a895a5 484 Gene3D G3DSA:1.10.3210.10 269 484 8.6E-76 T 13-10-2018 VAA_01410 d3f5a66e00e79d4693b1027388a895a5 484 Pfam PF13487 HD domain 353 422 7.3E-18 T 13-10-2018 VAA_01410 d3f5a66e00e79d4693b1027388a895a5 484 SMART SM00471 290 440 1.2E-8 T 13-10-2018 IPR003607 HD/PDEase domain VAA_01410 d3f5a66e00e79d4693b1027388a895a5 484 SUPERFAMILY SSF109604 270 469 5.65E-32 T 13-10-2018 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 Pfam PF01212 Beta-eliminating lyase 14 402 9.4E-88 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 Gene3D G3DSA:3.40.640.10 26 299 1.2E-185 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 225 243 - T 13-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 Gene3D G3DSA:3.90.1150.10 2 433 1.2E-185 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 PIRSF PIRSF001386 1 437 7.7E-192 T 13-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 1 436 2.2E-272 T 13-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VAA_01202 e9d8f2b46adaf6eee7283c0e2c91b690 437 SUPERFAMILY SSF53383 2 436 3.59E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 SUPERFAMILY SSF55174 17 69 2.86E-11 T 13-10-2018 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 1.2E-106 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 Gene3D G3DSA:3.30.2350.10 84 315 2.6E-72 T 13-10-2018 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 Gene3D G3DSA:3.10.290.10 2 76 1.2E-24 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 Pfam PF00849 RNA pseudouridylate synthase 93 241 1.8E-31 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 Pfam PF01479 S4 domain 18 65 2.7E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 SUPERFAMILY SSF55120 77 317 1.97E-79 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 SMART SM00363 18 83 1.8E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00438 dc1bd881eaa8fdc055d99f52dce7e210 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.767 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 6.4E-224 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 SUPERFAMILY SSF53720 3 449 4.06E-122 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 Gene3D G3DSA:3.40.309.10 247 436 9.0E-139 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 2.7E-120 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_02649 f1583df60a1d697a682b4a675b40792c 485 Gene3D G3DSA:3.40.605.10 7 448 9.0E-139 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_00330 84d098cb7fd31c6e611e1d0460bbb683 193 Gene3D G3DSA:3.30.70.1070 89 184 1.1E-21 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_00330 84d098cb7fd31c6e611e1d0460bbb683 193 SUPERFAMILY SSF110997 100 164 1.12E-7 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_00330 84d098cb7fd31c6e611e1d0460bbb683 193 Pfam PF05036 Sporulation related domain 102 167 2.0E-11 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Gene3D G3DSA:1.10.486.10 458 670 8.1E-193 T 13-10-2018 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 PIRSF PIRSF000980 1 1145 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Gene3D G3DSA:3.40.50.10930 4 322 1.5E-125 T 13-10-2018 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 SUPERFAMILY SSF52540 372 815 8.5E-102 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1107 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Gene3D G3DSA:1.10.10.160 79 187 1.5E-125 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Gene3D G3DSA:1.10.10.990 874 947 1.2E-21 T 13-10-2018 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 SUPERFAMILY SSF52540 2 352 4.51E-121 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Gene3D G3DSA:3.40.50.300 340 813 8.1E-193 T 13-10-2018 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 811 1.4E-298 T 13-10-2018 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 SUPERFAMILY SSF52980 838 1133 3.06E-75 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_03637 2b3ba8170b9eb06569d975cb7c17574e 1147 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1107 20.749 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VAA_02913 c1fc8e6744669ed01310b76082945eda 236 Gene3D G3DSA:3.40.50.1580 1 236 1.9E-75 T 13-10-2018 VAA_02913 c1fc8e6744669ed01310b76082945eda 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.782 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAA_02913 c1fc8e6744669ed01310b76082945eda 236 Pfam PF01048 Phosphorylase superfamily 17 212 2.0E-35 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAA_02913 c1fc8e6744669ed01310b76082945eda 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02913 c1fc8e6744669ed01310b76082945eda 236 SUPERFAMILY SSF53167 3 234 2.49E-92 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAA_02913 c1fc8e6744669ed01310b76082945eda 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.8E-112 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VAA_01487 757b058f7cff1c6786c9cc93562f19f7 391 SUPERFAMILY SSF55347 148 311 3.27E-34 T 13-10-2018 VAA_01487 757b058f7cff1c6786c9cc93562f19f7 391 Gene3D G3DSA:3.40.50.720 17 363 1.8E-124 T 13-10-2018 VAA_01487 757b058f7cff1c6786c9cc93562f19f7 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 276 5.8E-11 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VAA_01487 757b058f7cff1c6786c9cc93562f19f7 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 1.3E-26 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VAA_01487 757b058f7cff1c6786c9cc93562f19f7 391 Gene3D G3DSA:3.30.360.10 147 388 1.8E-124 T 13-10-2018 VAA_01487 757b058f7cff1c6786c9cc93562f19f7 391 SUPERFAMILY SSF51735 11 173 2.14E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03546 ff595b880594a2a7ea00816aa45c71e9 277 SUPERFAMILY SSF56235 2 253 1.46E-50 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_03546 ff595b880594a2a7ea00816aa45c71e9 277 Pfam PF13230 Glutamine amidotransferases class-II 1 256 5.0E-114 T 13-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VAA_03546 ff595b880594a2a7ea00816aa45c71e9 277 Gene3D G3DSA:3.60.20.10 1 258 3.8E-99 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_00943 69048545bfd6c9244bc988435f166574 444 Gene3D G3DSA:1.20.1250.20 19 223 6.2E-53 T 13-10-2018 VAA_00943 69048545bfd6c9244bc988435f166574 444 SUPERFAMILY SSF103473 20 430 1.02E-78 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00943 69048545bfd6c9244bc988435f166574 444 Pfam PF07690 Major Facilitator Superfamily 36 396 3.6E-50 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_00943 69048545bfd6c9244bc988435f166574 444 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VAA_00943 69048545bfd6c9244bc988435f166574 444 Gene3D G3DSA:1.20.1250.20 237 435 6.6E-43 T 13-10-2018 VAA_00943 69048545bfd6c9244bc988435f166574 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 4.3E-138 T 13-10-2018 VAA_00943 69048545bfd6c9244bc988435f166574 444 PIRSF PIRSF002808 7 444 6.3E-142 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAA_01846 458de68d2e1d676276fb32665729327b 197 Pfam PF05751 FixH 45 185 8.6E-40 T 13-10-2018 IPR008620 Nitrogen fixation protein FixH VAA_04308 1857708d953c242f125f25f0d5c98449 366 Pfam PF11667 Putative zincin peptidase 159 246 2.7E-6 T 13-10-2018 IPR021683 Putative zincin peptidase VAA_02153 3f261652332e46591d9391e014388be0 210 Pfam PF02698 DUF218 domain 26 142 6.7E-21 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VAA_02153 3f261652332e46591d9391e014388be0 210 Gene3D G3DSA:3.40.50.620 16 151 8.5E-27 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00852 4712152ec73cc2afc5e3fb706e3d0f5d 146 Gene3D G3DSA:2.60.40.790 35 138 2.4E-25 T 13-10-2018 IPR008978 HSP20-like chaperone VAA_00852 4712152ec73cc2afc5e3fb706e3d0f5d 146 SUPERFAMILY SSF49764 6 139 4.88E-25 T 13-10-2018 IPR008978 HSP20-like chaperone VAA_00852 4712152ec73cc2afc5e3fb706e3d0f5d 146 Pfam PF00011 Hsp20/alpha crystallin family 44 138 1.9E-21 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VAA_02488 bca948197ef629cc006934558c8951d8 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 8.9E-145 T 13-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 VAA_02488 bca948197ef629cc006934558c8951d8 257 SUPERFAMILY SSF53448 1 256 3.34E-68 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02488 bca948197ef629cc006934558c8951d8 257 Pfam PF00483 Nucleotidyl transferase 2 200 3.8E-18 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VAA_02488 bca948197ef629cc006934558c8951d8 257 Gene3D G3DSA:3.90.550.10 1 257 6.1E-76 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 Gene3D G3DSA:3.40.50.1100 59 155 1.2E-132 T 13-10-2018 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 SUPERFAMILY SSF55021 418 511 2.75E-26 T 13-10-2018 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 Gene3D G3DSA:3.40.1020.10 336 512 6.4E-72 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 SUPERFAMILY SSF55021 335 421 3.51E-27 T 13-10-2018 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 SUPERFAMILY SSF53686 12 363 4.58E-104 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 Gene3D G3DSA:3.40.50.1100 23 325 1.2E-132 T 13-10-2018 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 314 4.2E-81 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 3.1E-25 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 511 2.8E-26 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VAA_00865 a62dab97ce81e553a01ac281d9b4e524 512 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 13 511 3.1E-249 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 SUPERFAMILY SSF90123 28 346 1.7E-53 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 SMART SM00382 386 577 3.1E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 Gene3D G3DSA:1.20.1560.10 4 334 1.8E-28 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 Gene3D G3DSA:3.40.50.300 351 604 1.4E-91 T 13-10-2018 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 Pfam PF00005 ABC transporter 378 531 1.6E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 Pfam PF00664 ABC transporter transmembrane region 40 309 2.3E-18 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VAA_02874 27b1e48cacc5998562f22679e0992ff5 614 SUPERFAMILY SSF52540 350 601 1.11E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 SUPERFAMILY SSF52540 83 366 2.08E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 Gene3D G3DSA:3.40.50.300 1 225 2.9E-79 T 13-10-2018 VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 Pfam PF00270 DEAD/DEAH box helicase 30 202 2.7E-49 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 SMART SM00490 265 346 8.3E-33 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 SMART SM00487 25 229 1.8E-59 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 Gene3D G3DSA:3.40.50.300 226 417 3.2E-48 T 13-10-2018 VAA_01512 c4ef848618c937f2ec7df1a377611d33 421 Pfam PF00271 Helicase conserved C-terminal domain 241 346 2.1E-28 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 SUPERFAMILY SSF46785 2 88 4.45E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 Gene3D G3DSA:1.10.10.10 4 55 1.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 SUPERFAMILY SSF54909 63 152 2.86E-20 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 Gene3D G3DSA:3.30.70.920 56 140 5.7E-23 T 13-10-2018 VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 SMART SM00344 3 112 1.0E-44 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.2E-17 T 13-10-2018 VAA_03306 2676464ca933fd659ccd856d7bc3cc75 153 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.7E-20 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAA_02743 dfa3982ded39b7c36c1684a4569cca86 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 2.5E-12 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VAA_02743 dfa3982ded39b7c36c1684a4569cca86 185 SUPERFAMILY SSF56784 21 178 4.86E-41 T 13-10-2018 IPR036412 HAD-like superfamily VAA_02743 dfa3982ded39b7c36c1684a4569cca86 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 174 6.4E-61 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_02743 dfa3982ded39b7c36c1684a4569cca86 185 PIRSF PIRSF006118 11 185 1.0E-72 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_02743 dfa3982ded39b7c36c1684a4569cca86 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 157 3.7E-9 T 13-10-2018 VAA_02743 dfa3982ded39b7c36c1684a4569cca86 185 Gene3D G3DSA:3.40.50.1000 1 185 4.2E-58 T 13-10-2018 IPR023214 HAD superfamily VAA_02164 f28417fef51503af8767f2724957e504 1485 SUPERFAMILY SSF52540 26 224 1.86E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02164 f28417fef51503af8767f2724957e504 1485 Pfam PF04310 MukB N-terminal 2 227 3.5E-120 T 13-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VAA_02164 f28417fef51503af8767f2724957e504 1485 Gene3D G3DSA:1.20.58.850 621 831 9.6E-134 T 13-10-2018 VAA_02164 f28417fef51503af8767f2724957e504 1485 PIRSF PIRSF005246 1 1485 0.0 T 13-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VAA_02164 f28417fef51503af8767f2724957e504 1485 Gene3D G3DSA:3.40.1140.10 1384 1469 9.3E-39 T 13-10-2018 VAA_02164 f28417fef51503af8767f2724957e504 1485 Gene3D G3DSA:3.40.1140.10 1 227 8.6E-95 T 13-10-2018 VAA_02164 f28417fef51503af8767f2724957e504 1485 Gene3D G3DSA:1.20.1060.30 668 779 9.6E-134 T 13-10-2018 VAA_02164 f28417fef51503af8767f2724957e504 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 9.4E-15 T 13-10-2018 VAA_02164 f28417fef51503af8767f2724957e504 1485 Gene3D G3DSA:1.20.58.850 583 853 9.6E-134 T 13-10-2018 VAA_02164 f28417fef51503af8767f2724957e504 1485 Pfam PF16330 MukB hinge domain 647 811 4.6E-72 T 13-10-2018 IPR032520 MukB, hinge domain VAA_03196 110f3f955203d6ad778dfcd16abec114 172 Pfam PF01292 Prokaryotic cytochrome b561 3 170 2.2E-25 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAA_03196 110f3f955203d6ad778dfcd16abec114 172 SUPERFAMILY SSF81342 3 170 1.49E-21 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAA_04301 027db59f4bcec72067ed4eb00f2cfc10 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 200 1.8E-9 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAA_04301 027db59f4bcec72067ed4eb00f2cfc10 206 SUPERFAMILY SSF52833 1 83 6.94E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_04301 027db59f4bcec72067ed4eb00f2cfc10 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 77 5.1E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAA_04301 027db59f4bcec72067ed4eb00f2cfc10 206 SUPERFAMILY SSF47616 83 203 3.2E-22 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAA_04301 027db59f4bcec72067ed4eb00f2cfc10 206 Gene3D G3DSA:3.40.30.10 1 77 2.2E-20 T 13-10-2018 VAA_04301 027db59f4bcec72067ed4eb00f2cfc10 206 Gene3D G3DSA:1.20.1050.10 83 199 3.2E-30 T 13-10-2018 VAA_02768 838de791d205bacb4f5856e37a1f81cd 245 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 206 3.8E-59 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02768 838de791d205bacb4f5856e37a1f81cd 245 Gene3D G3DSA:3.30.2350.10 4 212 2.7E-69 T 13-10-2018 VAA_02768 838de791d205bacb4f5856e37a1f81cd 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02768 838de791d205bacb4f5856e37a1f81cd 245 Pfam PF00849 RNA pseudouridylate synthase 23 169 9.2E-29 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_02768 838de791d205bacb4f5856e37a1f81cd 245 SUPERFAMILY SSF55120 7 214 2.88E-63 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_00746 79c55400b503746e22bc4c45a4a7d976 562 Gene3D G3DSA:3.30.750.24 438 561 7.4E-13 T 13-10-2018 IPR036513 STAS domain superfamily VAA_00746 79c55400b503746e22bc4c45a4a7d976 562 Pfam PF01740 STAS domain 452 544 1.3E-10 T 13-10-2018 IPR002645 STAS domain VAA_00746 79c55400b503746e22bc4c45a4a7d976 562 SUPERFAMILY SSF52091 451 552 5.49E-10 T 13-10-2018 IPR036513 STAS domain superfamily VAA_00746 79c55400b503746e22bc4c45a4a7d976 562 Pfam PF00916 Sulfate permease family 23 388 1.1E-80 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAA_01205 a51687fb31918101199e83085b71a357 100 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.045 T 13-10-2018 IPR005346 RnfH protein VAA_01205 a51687fb31918101199e83085b71a357 100 SUPERFAMILY SSF54285 6 82 1.01E-25 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VAA_01205 a51687fb31918101199e83085b71a357 100 Pfam PF03658 RnfH family Ubiquitin 8 90 3.9E-34 T 13-10-2018 IPR005346 RnfH protein VAA_01205 a51687fb31918101199e83085b71a357 100 Gene3D G3DSA:3.10.20.280 2 92 3.4E-34 T 13-10-2018 IPR037021 RnfH superfamily VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 Gene3D G3DSA:1.10.286.10 1 84 7.1E-37 T 13-10-2018 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 SUPERFAMILY SSF55620 9 216 1.56E-74 T 13-10-2018 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 214 7.9E-79 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 Pfam PF01227 GTP cyclohydrolase I 38 215 2.0E-64 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-51 T 13-10-2018 VAA_01627 6f89c36dcc10b7e70c4d335e509bb8c6 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.841 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VAA_00379 b872c31d09380ace13077aeeae1efedc 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 4.7E-151 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VAA_00379 b872c31d09380ace13077aeeae1efedc 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 5.5E-135 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VAA_03355 37c0089edbdfa3866d4e8a8209a4b553 236 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 26 228 3.5E-66 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VAA_03355 37c0089edbdfa3866d4e8a8209a4b553 236 Pfam PF01914 MarC family integral membrane protein 32 232 3.6E-64 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 Gene3D G3DSA:3.40.50.300 1 320 2.0E-96 T 13-10-2018 VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 SMART SM00382 32 238 8.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.5E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 SUPERFAMILY SSF52540 32 301 1.66E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 2.4E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VAA_03246 5310c9b9adcecbe4cc4ac9fdfcad3040 323 Pfam PF00005 ABC transporter 24 180 6.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 Pfam PF04055 Radical SAM superfamily 24 178 7.8E-32 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 4.0E-20 T 13-10-2018 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 SUPERFAMILY SSF102114 23 220 3.34E-29 T 13-10-2018 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 PIRSF PIRSF000371 1 47 7.1E-11 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 PIRSF PIRSF000371 44 242 1.8E-44 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 3.8E-108 T 13-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VAA_03189 09f05b87090c4cc0af1f35fbcc00fa8f 246 Gene3D G3DSA:3.20.20.70 2 246 2.1E-103 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03133 b2080214a9004fb6495decac6abe6eee 331 Gene3D G3DSA:1.25.40.10 18 167 1.4E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03133 b2080214a9004fb6495decac6abe6eee 331 SMART SM00671 32 67 1.1E-7 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03133 b2080214a9004fb6495decac6abe6eee 331 SMART SM00671 68 103 2.3E-5 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03133 b2080214a9004fb6495decac6abe6eee 331 SMART SM00671 104 139 61.0 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03133 b2080214a9004fb6495decac6abe6eee 331 SUPERFAMILY SSF46565 277 328 2.36E-11 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_03133 b2080214a9004fb6495decac6abe6eee 331 Pfam PF08238 Sel1 repeat 124 137 110.0 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03133 b2080214a9004fb6495decac6abe6eee 331 Pfam PF08238 Sel1 repeat 33 67 1.3E-7 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03133 b2080214a9004fb6495decac6abe6eee 331 Pfam PF08238 Sel1 repeat 70 96 0.0041 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03133 b2080214a9004fb6495decac6abe6eee 331 Gene3D G3DSA:1.10.287.110 264 331 1.3E-11 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VAA_03133 b2080214a9004fb6495decac6abe6eee 331 SUPERFAMILY SSF81901 27 147 1.66E-22 T 13-10-2018 VAA_00556 2c571def14ce0d19d537541a3ba4fa92 288 Gene3D G3DSA:1.10.3210.10 16 288 4.6E-64 T 13-10-2018 VAA_00556 2c571def14ce0d19d537541a3ba4fa92 288 SUPERFAMILY SSF109604 20 264 2.89E-54 T 13-10-2018 VAA_00556 2c571def14ce0d19d537541a3ba4fa92 288 Pfam PF08668 HDOD domain 28 219 4.6E-51 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PIRSF PIRSF500210 1 336 2.7E-127 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PIRSF PIRSF000904 1 336 2.9E-124 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 196 3.6E-77 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 Gene3D G3DSA:3.40.190.80 202 335 4.6E-59 T 13-10-2018 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 6.9E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 6.9E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 6.9E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 6.9E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 6.9E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 6.9E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 Gene3D G3DSA:3.30.540.10 4 197 1.6E-77 T 13-10-2018 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.454 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 SUPERFAMILY SSF56655 3 331 2.11E-113 T 13-10-2018 VAA_02726 8432ae56bb9f40d977e5c87eb4b7de78 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VAA_01175 8df90c69ceb2cde141a765c76d900cad 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 9.9E-37 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain VAA_01175 8df90c69ceb2cde141a765c76d900cad 231 Gene3D G3DSA:2.40.30.70 1 139 1.0E-41 T 13-10-2018 IPR036414 YaeB, N-terminal domain superfamily VAA_01175 8df90c69ceb2cde141a765c76d900cad 231 SUPERFAMILY SSF118196 2 226 3.01E-76 T 13-10-2018 IPR036413 YaeB-like superfamily VAA_01175 8df90c69ceb2cde141a765c76d900cad 231 Gene3D G3DSA:3.30.2310.10 140 227 1.0E-18 T 13-10-2018 VAA_01175 8df90c69ceb2cde141a765c76d900cad 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 146 2.8E-46 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain VAA_01175 8df90c69ceb2cde141a765c76d900cad 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 13-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VAA_02699 90b94509ebeec6d615062f26e33b7327 150 SUPERFAMILY SSF55729 1 149 3.37E-36 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02699 90b94509ebeec6d615062f26e33b7327 150 Gene3D G3DSA:3.40.630.30 1 148 8.6E-44 T 13-10-2018 VAA_02699 90b94509ebeec6d615062f26e33b7327 150 Pfam PF13673 Acetyltransferase (GNAT) domain 42 149 2.1E-19 T 13-10-2018 IPR000182 GNAT domain VAA_03079 25e038da969893049cf7b7d7c339b833 357 Pfam PF01032 FecCD transport family 50 352 1.8E-83 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAA_03079 25e038da969893049cf7b7d7c339b833 357 Gene3D G3DSA:1.10.3470.10 30 354 3.4E-96 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_03079 25e038da969893049cf7b7d7c339b833 357 SUPERFAMILY SSF81345 32 352 4.18E-82 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_03079 25e038da969893049cf7b7d7c339b833 357 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 29 355 29.889 T 13-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VAA_03234 0a858ba5e11f4339a253e6736dc43ecb 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 36 191 7.9E-53 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VAA_03234 0a858ba5e11f4339a253e6736dc43ecb 203 SUPERFAMILY SSF89392 25 202 4.32E-52 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VAA_03234 0a858ba5e11f4339a253e6736dc43ecb 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 201 31.795 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VAA_03234 0a858ba5e11f4339a253e6736dc43ecb 203 Gene3D G3DSA:2.50.20.10 21 202 8.1E-47 T 13-10-2018 VAA_03234 0a858ba5e11f4339a253e6736dc43ecb 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 9 202 6.6E-64 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VAA_02507 52c39559c403e8f35120359ae08e79b4 242 SUPERFAMILY SSF50494 52 215 7.54E-19 T 13-10-2018 IPR009003 Peptidase S1, PA clan VAA_02507 52c39559c403e8f35120359ae08e79b4 242 Pfam PF13365 Trypsin-like peptidase domain 79 178 3.9E-6 T 13-10-2018 VAA_02507 52c39559c403e8f35120359ae08e79b4 242 Gene3D G3DSA:2.40.10.120 45 220 5.2E-12 T 13-10-2018 VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 SUPERFAMILY SSF51735 5 244 1.35E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 1.5E-4 T 13-10-2018 VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 5.3E-67 T 13-10-2018 VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 Gene3D G3DSA:3.40.50.720 1 245 6.4E-89 T 13-10-2018 VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.2E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.2E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.2E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 3.7E-100 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03343 4e788eb63da900e7fbecad60e6e9065e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03904 3d78ca86e325fa6b3dbb340e4e5c8444 292 Pfam PF14319 Transposase zinc-binding domain 30 135 2.8E-28 T 13-10-2018 IPR026889 Transposase zinc-binding domain VAA_03904 3d78ca86e325fa6b3dbb340e4e5c8444 292 Pfam PF04986 Putative transposase 158 290 9.5E-34 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_03677 f78a930a43b2ee14cbb32e3f7596a5f8 61 Pfam PF12065 Protein of unknown function (DUF3545) 3 59 3.7E-24 T 13-10-2018 IPR021932 Protein of unknown function DUF3545 VAA_01198 749d0cd20a75a28840349234faacb31e 205 Gene3D G3DSA:2.30.22.10 149 205 2.3E-26 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 SUPERFAMILY SSF51064 150 205 3.4E-20 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 SUPERFAMILY SSF58014 51 149 8.63E-29 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 Gene3D G3DSA:3.90.20.20 42 148 1.6E-32 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 PRINTS PR00773 GrpE protein signature 74 90 2.6E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 PRINTS PR00773 GrpE protein signature 157 172 2.6E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 PRINTS PR00773 GrpE protein signature 102 117 2.6E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 PRINTS PR00773 GrpE protein signature 184 203 2.6E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 Hamap MF_01151 Protein GrpE [grpE]. 8 205 22.604 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 ProSitePatterns PS01071 grpE protein signature. 160 203 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_01198 749d0cd20a75a28840349234faacb31e 205 Pfam PF01025 GrpE 44 205 4.8E-54 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VAA_02294 9450901206250cb4febb392cd850163a 97 SMART SM00411 8 97 3.3E-44 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 7.2E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 7.2E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 7.2E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 Gene3D G3DSA:4.10.520.10 8 97 2.7E-36 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 Pfam PF00216 Bacterial DNA-binding protein 8 97 1.3E-33 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02294 9450901206250cb4febb392cd850163a 97 SUPERFAMILY SSF47729 8 97 5.45E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Gene3D G3DSA:3.30.110.130 46 130 7.8E-31 T 13-10-2018 VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Gene3D G3DSA:2.100.10.30 606 740 2.9E-30 T 13-10-2018 IPR036404 Jacalin-like lectin domain superfamily VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 SUPERFAMILY SSF56959 283 476 9.48E-5 T 13-10-2018 IPR036435 Leukocidin/porin MspA superfamily VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Pfam PF12563 Hemolytic toxin N terminal 2 188 1.6E-97 T 13-10-2018 IPR022220 Hemolytic toxin, N-terminal VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Pfam PF07968 Leukocidin/Hemolysin toxin family 214 476 1.1E-75 T 13-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Pfam PF16458 Beta-prism lectin 610 737 4.1E-52 T 13-10-2018 IPR032496 Hemolysin, beta-prism lectin VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 SMART SM00458 483 598 1.0E-10 T 13-10-2018 IPR000772 Ricin B, lectin domain VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Gene3D G3DSA:2.70.240.20 166 584 2.0E-191 T 13-10-2018 VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 Gene3D G3DSA:3.30.70.2270 301 348 2.0E-191 T 13-10-2018 VAA_02992 239c0eb5febaedc7bf2e5bdcb7b9342c 740 SUPERFAMILY SSF50370 486 589 1.84E-13 T 13-10-2018 IPR035992 Ricin B-like lectins VAA_01140 de1a6a30182360df7f3af093aeb88d96 287 Gene3D G3DSA:2.60.40.1180 205 284 1.4E-15 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VAA_01140 de1a6a30182360df7f3af093aeb88d96 287 SUPERFAMILY SSF51011 204 283 3.44E-15 T 13-10-2018 VAA_01140 de1a6a30182360df7f3af093aeb88d96 287 Pfam PF00128 Alpha amylase, catalytic domain 1 100 1.9E-27 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VAA_01140 de1a6a30182360df7f3af093aeb88d96 287 Gene3D G3DSA:3.20.20.80 1 204 3.2E-75 T 13-10-2018 VAA_01140 de1a6a30182360df7f3af093aeb88d96 287 SUPERFAMILY SSF51445 1 199 2.53E-51 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01635 412386b2b358b968c5ef6f6bfc2e1482 155 Pfam PF14760 Rnk N-terminus 27 64 2.8E-12 T 13-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VAA_01635 412386b2b358b968c5ef6f6bfc2e1482 155 Gene3D G3DSA:1.10.286.20 23 64 1.1E-5 T 13-10-2018 VAA_01635 412386b2b358b968c5ef6f6bfc2e1482 155 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 70 144 2.8E-17 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAA_01635 412386b2b358b968c5ef6f6bfc2e1482 155 SUPERFAMILY SSF54534 69 145 9.94E-17 T 13-10-2018 VAA_01635 412386b2b358b968c5ef6f6bfc2e1482 155 Gene3D G3DSA:3.10.50.30 65 155 1.3E-26 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 Gene3D G3DSA:3.90.930.12 1 82 8.7E-30 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 Pfam PF00347 Ribosomal protein L6 91 164 9.8E-19 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 Pfam PF00347 Ribosomal protein L6 11 82 5.4E-20 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 Gene3D G3DSA:3.90.930.12 83 177 4.7E-39 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.1E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.1E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.1E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.215 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.2E-73 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 SUPERFAMILY SSF56053 1 82 2.75E-24 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 PIRSF PIRSF002162 1 177 1.0E-42 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02685 de99eb59cb03140bf9a59f6d17c050ba 177 SUPERFAMILY SSF56053 83 177 2.5E-35 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00623 e15207f7005705770e60701996c43899 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 280 2.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00623 e15207f7005705770e60701996c43899 434 SUPERFAMILY SSF55874 288 433 2.62E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00623 e15207f7005705770e60701996c43899 434 Gene3D G3DSA:3.30.565.10 288 434 5.6E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00623 e15207f7005705770e60701996c43899 434 SMART SM00388 226 286 5.3E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VAA_00623 e15207f7005705770e60701996c43899 434 Gene3D G3DSA:1.10.287.130 171 281 3.0E-22 T 13-10-2018 VAA_00623 e15207f7005705770e60701996c43899 434 SMART SM00304 173 225 2.7E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00623 e15207f7005705770e60701996c43899 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 432 3.2E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_00623 e15207f7005705770e60701996c43899 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00623 e15207f7005705770e60701996c43899 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00623 e15207f7005705770e60701996c43899 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00623 e15207f7005705770e60701996c43899 434 SUPERFAMILY SSF47384 220 281 3.92E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VAA_00623 e15207f7005705770e60701996c43899 434 Pfam PF00672 HAMP domain 173 221 4.1E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_00623 e15207f7005705770e60701996c43899 434 SMART SM00387 325 434 5.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 SUPERFAMILY SSF46689 3 70 5.34E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 Gene3D G3DSA:1.10.10.60 1 47 2.8E-19 T 13-10-2018 VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 Gene3D G3DSA:1.10.357.10 49 193 1.8E-19 T 13-10-2018 VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 SUPERFAMILY SSF48498 81 191 4.82E-18 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VAA_02858 4e3a77cdd525cf2f3daf9759427194fa 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 6.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_01935 81ddb540bc0d4fbfce8c3ec1ccb1a2db 190 Pfam PF07308 Protein of unknown function (DUF1456) 112 178 1.5E-22 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 VAA_01935 81ddb540bc0d4fbfce8c3ec1ccb1a2db 190 Pfam PF07308 Protein of unknown function (DUF1456) 33 97 4.4E-21 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 VAA_00081 56ad2a6ffb95462c0c24f6bbf69de2aa 193 Pfam PF03695 Uncharacterised protein family (UPF0149) 7 182 2.6E-38 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAA_00081 56ad2a6ffb95462c0c24f6bbf69de2aa 193 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 178 1.7E-44 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VAA_00081 56ad2a6ffb95462c0c24f6bbf69de2aa 193 SUPERFAMILY SSF101327 6 180 1.31E-30 T 13-10-2018 IPR036255 YgfB-like superfamily VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Pfam PF00158 Sigma-54 interaction domain 144 310 1.6E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Gene3D G3DSA:3.40.50.2300 2 128 2.5E-34 T 13-10-2018 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 SUPERFAMILY SSF52540 144 374 2.58E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Gene3D G3DSA:1.10.10.60 394 442 5.8E-13 T 13-10-2018 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 SUPERFAMILY SSF52172 2 188 7.97E-36 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 SMART SM00382 164 308 7.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 SMART SM00448 2 114 1.6E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Pfam PF00072 Response regulator receiver domain 4 114 2.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 4.7E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Gene3D G3DSA:1.10.8.60 315 393 1.1E-20 T 13-10-2018 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 SUPERFAMILY SSF46689 355 440 5.82E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 Gene3D G3DSA:3.40.50.300 129 314 6.7E-61 T 13-10-2018 VAA_02301 9b46ebaf0a87478c848f2970747c218b 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 Pfam PF00999 Sodium/hydrogen exchanger family 12 371 2.2E-66 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 Gene3D G3DSA:1.20.1530.20 4 384 4.1E-84 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VAA_02658 88827112dd3750c0c8807c6887bb1482 599 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 48.548 T 13-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 SUPERFAMILY SSF51735 401 530 5.92E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02658 88827112dd3750c0c8807c6887bb1482 599 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 282 3.8E-80 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 7.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 7.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 7.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 7.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 Gene3D G3DSA:3.40.50.720 398 560 5.6E-36 T 13-10-2018 VAA_02658 88827112dd3750c0c8807c6887bb1482 599 Pfam PF02254 TrkA-N domain 402 513 8.1E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAA_02686 55a0280aac08196be10a11f665b84754 117 Gene3D G3DSA:3.30.420.100 1 117 1.4E-43 T 13-10-2018 VAA_02686 55a0280aac08196be10a11f665b84754 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.0E-43 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02686 55a0280aac08196be10a11f665b84754 117 SUPERFAMILY SSF53137 3 115 1.29E-50 T 13-10-2018 VAA_02686 55a0280aac08196be10a11f665b84754 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.726 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02686 55a0280aac08196be10a11f665b84754 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.0E-43 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01896 8b21685f23f42d0cc1a1d06dfae89dbc 111 Pfam PF04986 Putative transposase 1 32 7.7E-8 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 SUPERFAMILY SSF53901 216 406 6.59E-59 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 Gene3D G3DSA:3.40.47.10 261 408 8.2E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 4.2E-26 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 2.5E-40 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 Gene3D G3DSA:3.40.47.10 1 255 1.3E-56 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.9E-10 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VAA_03273 466d1b102fd85cb8105858d16a2acf74 409 SUPERFAMILY SSF53901 3 252 8.64E-54 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_00434 2d5f68a07fc562e24bcf6ca86ba5dee6 115 Gene3D G3DSA:3.30.160.100 8 113 3.6E-33 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAA_00434 2d5f68a07fc562e24bcf6ca86ba5dee6 115 SUPERFAMILY SSF69754 8 110 1.01E-29 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VAA_00434 2d5f68a07fc562e24bcf6ca86ba5dee6 115 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 10 99 1.8E-22 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAA_00434 2d5f68a07fc562e24bcf6ca86ba5dee6 115 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 8 107 1.8E-30 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VAA_02595 440f07b909f9f8f9b645768486e901c6 265 Gene3D G3DSA:3.20.20.70 9 264 1.7E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02595 440f07b909f9f8f9b645768486e901c6 265 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 13 249 2.7E-78 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02595 440f07b909f9f8f9b645768486e901c6 265 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 10 258 58.749 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02595 440f07b909f9f8f9b645768486e901c6 265 SUPERFAMILY SSF51351 10 259 3.8E-88 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02595 440f07b909f9f8f9b645768486e901c6 265 Pfam PF00121 Triosephosphate isomerase 13 255 2.9E-85 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02595 440f07b909f9f8f9b645768486e901c6 265 ProSitePatterns PS00171 Triosephosphate isomerase active site. 175 185 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02313 6145ceab30f4b2f4d316a3fa2076dce1 511 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 488 5.0E-122 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAA_01605 504b078c3e2d03041bea0a4871853de4 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 162 342 3.3E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01605 504b078c3e2d03041bea0a4871853de4 347 Gene3D G3DSA:1.10.3720.10 134 339 1.7E-17 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01605 504b078c3e2d03041bea0a4871853de4 347 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 56 2.1E-6 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAA_01605 504b078c3e2d03041bea0a4871853de4 347 SUPERFAMILY SSF161098 139 326 2.88E-19 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00627 28cee4da8f62a5b73ee56c9aeaf7a34c 217 SUPERFAMILY SSF55469 1 216 2.09E-62 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAA_00627 28cee4da8f62a5b73ee56c9aeaf7a34c 217 Gene3D G3DSA:3.40.109.10 1 217 1.4E-57 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VAA_00627 28cee4da8f62a5b73ee56c9aeaf7a34c 217 Pfam PF00881 Nitroreductase family 9 193 1.3E-27 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VAA_02433 38a3fa03f52a3530dfeca88e3fd93385 94 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 39 85 4.6E-12 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 VAA_02433 38a3fa03f52a3530dfeca88e3fd93385 94 Pfam PF12728 Helix-turn-helix domain 39 89 2.9E-14 T 13-10-2018 VAA_02433 38a3fa03f52a3530dfeca88e3fd93385 94 SUPERFAMILY SSF46955 39 91 5.49E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 Gene3D G3DSA:2.40.430.10 128 214 1.2E-54 T 13-10-2018 VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 SUPERFAMILY SSF161098 273 513 6.02E-56 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 Gene3D G3DSA:3.10.650.10 108 278 1.2E-54 T 13-10-2018 VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 3.2E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 Gene3D G3DSA:1.20.58.370 16 105 4.6E-33 T 13-10-2018 IPR035277 MalF, N-terminal VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 4.9E-59 T 13-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 Gene3D G3DSA:1.10.3720.10 280 522 1.5E-67 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01250 0fd7ce91104cd2970ed4407311f84e86 524 SUPERFAMILY SSF160964 24 270 1.24E-82 T 13-10-2018 VAA_04087 0e5970ce6e2acfbeba8b9951f8b16b32 278 Gene3D G3DSA:1.10.10.60 36 77 1.2E-6 T 13-10-2018 VAA_04087 0e5970ce6e2acfbeba8b9951f8b16b32 278 Pfam PF13936 Helix-turn-helix domain 34 77 2.0E-16 T 13-10-2018 IPR025246 Transposase IS30-like HTH domain VAA_04087 0e5970ce6e2acfbeba8b9951f8b16b32 278 SUPERFAMILY SSF53098 207 275 2.66E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00730 dc6fa86ac5c16dca3b642dfff69e0b25 45 Gene3D G3DSA:3.40.50.300 1 44 9.3E-7 T 13-10-2018 VAA_03201 9b891af7d762244e596c92b0e828247e 692 Pfam PF03772 Competence protein 153 407 2.5E-54 T 13-10-2018 IPR004477 ComEC/Rec2-related protein VAA_03201 9b891af7d762244e596c92b0e828247e 692 Gene3D G3DSA:3.60.15.10 434 677 1.8E-45 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_03201 9b891af7d762244e596c92b0e828247e 692 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 175 347 2.4E-28 T 13-10-2018 IPR004477 ComEC/Rec2-related protein VAA_03201 9b891af7d762244e596c92b0e828247e 692 Pfam PF00753 Metallo-beta-lactamase superfamily 444 625 7.9E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_03201 9b891af7d762244e596c92b0e828247e 692 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 81 658 8.8E-121 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VAA_03201 9b891af7d762244e596c92b0e828247e 692 SUPERFAMILY SSF56281 434 675 2.57E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_03201 9b891af7d762244e596c92b0e828247e 692 SMART SM00849 446 629 2.3E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_00954 959bc8d4fa9d292d013ef61330196cd6 496 SUPERFAMILY SSF52091 392 484 8.04E-12 T 13-10-2018 IPR036513 STAS domain superfamily VAA_00954 959bc8d4fa9d292d013ef61330196cd6 496 Gene3D G3DSA:3.30.750.24 387 484 4.9E-28 T 13-10-2018 IPR036513 STAS domain superfamily VAA_00954 959bc8d4fa9d292d013ef61330196cd6 496 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 13-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 VAA_00954 959bc8d4fa9d292d013ef61330196cd6 496 Pfam PF00916 Sulfate permease family 14 346 1.5E-48 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAA_00954 959bc8d4fa9d292d013ef61330196cd6 496 Pfam PF01740 STAS domain 403 486 1.1E-9 T 13-10-2018 IPR002645 STAS domain VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 Gene3D G3DSA:3.30.565.10 166 315 7.8E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 SMART SM00387 204 315 1.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 SUPERFAMILY SSF55874 154 314 1.57E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 206 313 2.0E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 Gene3D G3DSA:1.10.287.130 37 157 1.0E-22 T 13-10-2018 VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 273 2.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 2.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 2.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_02756 5862142db6c8037118d3ad810de7f0c9 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 259 2.2E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 27 160 1.7E-58 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 26 49 4.6E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 Gene3D G3DSA:3.30.700.10 51 159 1.1E-43 T 13-10-2018 VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 64 82 4.5E-22 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 28 53 4.5E-22 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 SUPERFAMILY SSF54523 54 160 1.73E-38 T 13-10-2018 VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 24 48 1.2E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00650 1b7038dc1c87e2abae2ff5d1b80825c2 165 Pfam PF08334 Type II secretion system (T2SS), protein G 51 159 1.7E-42 T 13-10-2018 IPR013545 Type II secretion system protein G VAA_00180 455011650917a677cac22a0ee7cc8e81 236 Pfam PF04402 Protein of unknown function (DUF541) 35 232 1.6E-38 T 13-10-2018 IPR007497 Protein of unknown function DUF541 VAA_00180 455011650917a677cac22a0ee7cc8e81 236 Gene3D G3DSA:3.30.70.2970 46 153 4.7E-49 T 13-10-2018 VAA_00180 455011650917a677cac22a0ee7cc8e81 236 Gene3D G3DSA:3.30.110.170 36 233 4.7E-49 T 13-10-2018 VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 SUPERFAMILY SSF53850 90 278 4.52E-17 T 13-10-2018 VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 SUPERFAMILY SSF46785 1 82 1.24E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 Gene3D G3DSA:3.40.190.290 91 279 3.6E-7 T 13-10-2018 VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 Pfam PF03466 LysR substrate binding domain 91 265 7.5E-11 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 Gene3D G3DSA:1.10.10.10 1 83 1.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02784 9f77b6110c19aa84dbec87b0833b16cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00349 33703771300c5c0312f5f8a9ec388af8 164 PIRSF PIRSF016548 3 164 2.0E-68 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VAA_00349 33703771300c5c0312f5f8a9ec388af8 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 3.1E-54 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VAA_00349 33703771300c5c0312f5f8a9ec388af8 164 Gene3D G3DSA:1.20.120.1370 1 157 4.4E-51 T 13-10-2018 IPR038309 Rsd/AlgQ superfamily VAA_00290 e2a6a1525b22b5f30bf704636a97eab1 331 Gene3D G3DSA:3.40.1350.10 24 134 4.7E-8 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VAA_01015 575e4874d7b870fe73e7eee4224ba2e1 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 5.0E-44 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VAA_01015 575e4874d7b870fe73e7eee4224ba2e1 328 SUPERFAMILY SSF52540 3 169 6.93E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01015 575e4874d7b870fe73e7eee4224ba2e1 328 Gene3D G3DSA:3.40.50.300 2 198 8.1E-47 T 13-10-2018 VAA_02898 23c94737d017305e45774a6bfe36534e 417 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 15 416 36.52 T 13-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VAA_02898 23c94737d017305e45774a6bfe36534e 417 SUPERFAMILY SSF118215 27 410 2.22E-97 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_02898 23c94737d017305e45774a6bfe36534e 417 Gene3D G3DSA:1.10.3860.10 15 417 9.6E-72 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_02898 23c94737d017305e45774a6bfe36534e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 25 45 4.7E-14 T 13-10-2018 VAA_02898 23c94737d017305e45774a6bfe36534e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 4.7E-14 T 13-10-2018 VAA_02898 23c94737d017305e45774a6bfe36534e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 4.7E-14 T 13-10-2018 VAA_02898 23c94737d017305e45774a6bfe36534e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 4.7E-14 T 13-10-2018 VAA_02898 23c94737d017305e45774a6bfe36534e 417 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 4.7E-14 T 13-10-2018 VAA_02898 23c94737d017305e45774a6bfe36534e 417 Pfam PF00375 Sodium:dicarboxylate symporter family 27 409 5.1E-67 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.379 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Gene3D G3DSA:3.40.50.10490 448 595 1.6E-146 T 13-10-2018 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Pfam PF01380 SIS domain 290 419 6.1E-32 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Pfam PF01380 SIS domain 463 592 8.2E-26 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 SUPERFAMILY SSF53697 245 610 2.32E-113 T 13-10-2018 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Gene3D G3DSA:3.40.50.10490 249 609 1.6E-146 T 13-10-2018 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 SUPERFAMILY SSF56235 2 233 7.21E-75 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Pfam PF13522 Glutamine amidotransferase domain 62 174 7.7E-21 T 13-10-2018 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.8E-261 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VAA_00175 7de831a6ccd13a1cf0e8e118f21f44e5 610 Gene3D G3DSA:3.60.20.10 2 241 1.9E-80 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_01514 aaf36625fdebe25fad1fa744fd801dbe 334 PIRSF PIRSF017617 1 334 4.3E-132 T 13-10-2018 IPR023603 Threonine aldolase VAA_01514 aaf36625fdebe25fad1fa744fd801dbe 334 Pfam PF01212 Beta-eliminating lyase 2 283 2.6E-99 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VAA_01514 aaf36625fdebe25fad1fa744fd801dbe 334 SUPERFAMILY SSF53383 1 330 5.78E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01514 aaf36625fdebe25fad1fa744fd801dbe 334 Gene3D G3DSA:3.40.640.10 1 243 1.7E-96 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01514 aaf36625fdebe25fad1fa744fd801dbe 334 Gene3D G3DSA:3.90.1150.10 244 333 8.2E-23 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02187 8bab25a23adeb783d15857a71889ef70 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.5E-33 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VAA_02187 8bab25a23adeb783d15857a71889ef70 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.751 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VAA_02187 8bab25a23adeb783d15857a71889ef70 106 SUPERFAMILY SSF54736 22 105 9.94E-32 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAA_02187 8bab25a23adeb783d15857a71889ef70 106 Gene3D G3DSA:3.30.1390.10 1 106 2.4E-45 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAA_00122 a5e311f9a3551bc45cf23d384acb2b50 83 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 26 80 1.1E-21 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 VAA_02269 ca942b9be799d3f4d233ed3fb40a0ac4 192 Pfam PF16036 Chalcone isomerase-like 54 189 2.8E-8 T 13-10-2018 IPR016087 Chalcone isomerase GO:0016872 VAA_02148 6f3367bfc9a08c5f17004610f947550f 301 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 42 296 1.3E-77 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAA_02148 6f3367bfc9a08c5f17004610f947550f 301 Pfam PF01226 Formate/nitrite transporter 30 292 1.2E-74 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAA_02148 6f3367bfc9a08c5f17004610f947550f 301 Gene3D G3DSA:1.20.1080.10 44 297 9.2E-95 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAA_02148 6f3367bfc9a08c5f17004610f947550f 301 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 99 108 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAA_02148 6f3367bfc9a08c5f17004610f947550f 301 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 184 194 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VAA_02148 6f3367bfc9a08c5f17004610f947550f 301 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 30 295 1.1E-114 T 13-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VAA_02946 eb651d278f49a48eb677348fdd471f0c 350 Gene3D G3DSA:3.30.565.10 203 341 5.9E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02946 eb651d278f49a48eb677348fdd471f0c 350 Pfam PF06580 Histidine kinase 150 228 4.0E-25 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VAA_02946 eb651d278f49a48eb677348fdd471f0c 350 SUPERFAMILY SSF55874 206 337 5.5E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_02946 eb651d278f49a48eb677348fdd471f0c 350 SUPERFAMILY SSF103473 13 123 9.94E-5 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01974 4d120aee476bb773a93751189b996ece 390 SUPERFAMILY SSF58104 240 381 7.59E-14 T 13-10-2018 VAA_01974 4d120aee476bb773a93751189b996ece 390 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 191 2.0E-20 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VAA_01974 4d120aee476bb773a93751189b996ece 390 Gene3D G3DSA:1.10.287.950 220 381 1.4E-15 T 13-10-2018 VAA_01844 810142acd6c82383a2560ca5c5af9251 56 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 4.8E-21 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VAA_01844 810142acd6c82383a2560ca5c5af9251 56 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 1.7E-17 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 Pfam PF00487 Fatty acid desaturase 43 262 3.3E-21 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PIRSF PIRSF000345 7 333 6.5E-97 T 13-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 99 128 2.7E-33 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 61 81 2.7E-33 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 2.7E-33 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 158 176 2.7E-33 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 2.7E-33 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VAA_01061 12efeda9a3bd91efa026dab800ffdeb2 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 38 60 2.7E-33 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VAA_01826 5e365a74d80436d177d13a54df277df9 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 3.7E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01826 5e365a74d80436d177d13a54df277df9 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01826 5e365a74d80436d177d13a54df277df9 211 Pfam PF00072 Response regulator receiver domain 4 116 3.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01826 5e365a74d80436d177d13a54df277df9 211 SUPERFAMILY SSF46894 138 205 1.56E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01826 5e365a74d80436d177d13a54df277df9 211 SMART SM00448 2 115 1.8E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01826 5e365a74d80436d177d13a54df277df9 211 SUPERFAMILY SSF52172 1 125 1.34E-28 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01826 5e365a74d80436d177d13a54df277df9 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01826 5e365a74d80436d177d13a54df277df9 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01826 5e365a74d80436d177d13a54df277df9 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01826 5e365a74d80436d177d13a54df277df9 211 Gene3D G3DSA:3.40.50.12740 2 206 5.0E-54 T 13-10-2018 VAA_01826 5e365a74d80436d177d13a54df277df9 211 SMART SM00421 143 200 2.6E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01578 3396d8b497bedd80eb207dffae5a6e91 145 SUPERFAMILY SSF158675 1 145 2.09E-50 T 13-10-2018 IPR023132 Sama2622-like superfamily VAA_01578 3396d8b497bedd80eb207dffae5a6e91 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 5.4E-50 T 13-10-2018 IPR021422 Protein of unknown function DUF3069 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 38 102 1.3E-13 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Gene3D G3DSA:3.40.50.300 104 392 1.4E-130 T 13-10-2018 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Gene3D G3DSA:2.40.30.20 11 102 4.4E-29 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 SUPERFAMILY SSF52540 106 391 3.44E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00827 61d5d7071f21c6789ce517088077b40f 523 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 12 522 1.4E-251 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 376 385 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 SUPERFAMILY SSF50615 20 104 1.43E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 392 517 4.1E-44 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 11 522 49.812 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Gene3D G3DSA:1.20.150.20 393 523 3.9E-48 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 SUPERFAMILY SSF47917 393 521 7.85E-46 T 13-10-2018 VAA_00827 61d5d7071f21c6789ce517088077b40f 523 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 385 8.1E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VAA_02332 3eefece519086db74e3112cc8e808b85 187 PIRSF PIRSF004982 5 187 2.9E-59 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VAA_02332 3eefece519086db74e3112cc8e808b85 187 Pfam PF03843 Outer membrane lipoprotein Slp family 20 168 3.3E-45 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VAA_02332 3eefece519086db74e3112cc8e808b85 187 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 8 160 3.8E-35 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VAA_02589 09a9b793c286314d37c732ede38d3d39 188 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.89 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VAA_02589 09a9b793c286314d37c732ede38d3d39 188 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.2E-86 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VAA_02589 09a9b793c286314d37c732ede38d3d39 188 Pfam PF00227 Proteasome subunit 2 167 1.2E-23 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VAA_02589 09a9b793c286314d37c732ede38d3d39 188 Gene3D G3DSA:3.60.20.10 1 173 4.5E-67 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02589 09a9b793c286314d37c732ede38d3d39 188 SUPERFAMILY SSF56235 2 172 1.49E-57 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02589 09a9b793c286314d37c732ede38d3d39 188 PIRSF PIRSF039093 1 175 3.4E-87 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VAA_01901 fe15ca4c618c807c0659125821d79acb 127 SMART SM00448 10 123 6.0E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01901 fe15ca4c618c807c0659125821d79acb 127 Pfam PF00072 Response regulator receiver domain 12 123 1.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01901 fe15ca4c618c807c0659125821d79acb 127 Gene3D G3DSA:3.40.50.12740 10 127 2.4E-38 T 13-10-2018 VAA_01901 fe15ca4c618c807c0659125821d79acb 127 SUPERFAMILY SSF52172 9 127 9.68E-39 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01019 66740ac009a47e5f57c924288bfc414e 428 Gene3D G3DSA:1.20.1600.10 31 428 7.3E-75 T 13-10-2018 VAA_01019 66740ac009a47e5f57c924288bfc414e 428 Pfam PF02321 Outer membrane efflux protein 235 412 2.9E-28 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_01019 66740ac009a47e5f57c924288bfc414e 428 Pfam PF02321 Outer membrane efflux protein 33 209 2.3E-23 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_01019 66740ac009a47e5f57c924288bfc414e 428 SUPERFAMILY SSF56954 8 417 1.57E-74 T 13-10-2018 VAA_01203 84acbd80182b1484a0c90b61322cdd75 563 PIRSF PIRSF003128 10 563 1.4E-161 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VAA_01203 84acbd80182b1484a0c90b61322cdd75 563 SUPERFAMILY SSF52540 10 518 3.58E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01203 84acbd80182b1484a0c90b61322cdd75 563 TIGRFAM TIGR00634 recN: DNA repair protein RecN 10 560 2.2E-174 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VAA_01203 84acbd80182b1484a0c90b61322cdd75 563 Gene3D G3DSA:3.40.50.300 9 215 3.1E-44 T 13-10-2018 VAA_01203 84acbd80182b1484a0c90b61322cdd75 563 Gene3D G3DSA:3.40.50.300 248 562 2.8E-51 T 13-10-2018 VAA_01203 84acbd80182b1484a0c90b61322cdd75 563 Pfam PF02463 RecF/RecN/SMC N terminal domain 11 516 2.8E-18 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 Pfam PF00005 ABC transporter 21 169 4.6E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 SMART SM00382 30 235 1.7E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 SMART SM00930 265 340 6.5E-27 T 13-10-2018 IPR018449 NIL domain VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 Pfam PF09383 NIL domain 268 339 1.1E-20 T 13-10-2018 IPR018449 NIL domain VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 Gene3D G3DSA:3.40.50.300 1 232 6.2E-75 T 13-10-2018 VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 SUPERFAMILY SSF55021 248 343 2.52E-25 T 13-10-2018 VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 Gene3D G3DSA:3.30.70.260 244 344 1.4E-39 T 13-10-2018 VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 SUPERFAMILY SSF52540 1 239 1.09E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01146 ab8143ccf418c86a5989d4281331cb02 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 5.8E-198 T 13-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 SUPERFAMILY SSF55874 432 545 1.36E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 Gene3D G3DSA:3.30.450.40 239 364 4.2E-7 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 Pfam PF07694 5TMR of 5TMR-LYT 37 206 4.7E-59 T 13-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 Pfam PF06580 Histidine kinase 378 456 1.4E-26 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 Gene3D G3DSA:3.30.565.10 431 568 1.5E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 SUPERFAMILY SSF55781 243 363 5.15E-8 T 13-10-2018 VAA_00423 759b7964b7dd6db7ba071871d6ca26a0 571 Pfam PF13492 GAF domain 255 363 2.0E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 VAA_03066 015872c80420bfcabe581a5373abd558 313 SUPERFAMILY SSF52317 18 297 3.4E-102 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03066 015872c80420bfcabe581a5373abd558 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.189 T 13-10-2018 IPR033752 MetA family VAA_03066 015872c80420bfcabe581a5373abd558 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-127 T 13-10-2018 VAA_03066 015872c80420bfcabe581a5373abd558 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.6E-163 T 13-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VAA_03066 015872c80420bfcabe581a5373abd558 313 PIRSF PIRSF000450 1 309 7.0E-148 T 13-10-2018 IPR033752 MetA family VAA_03066 015872c80420bfcabe581a5373abd558 313 Gene3D G3DSA:3.40.50.880 1 301 5.5E-124 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_03066 015872c80420bfcabe581a5373abd558 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.6E-135 T 13-10-2018 IPR033752 MetA family VAA_02258 9dc1da1375a4e882bbcb305c11852cda 133 Pfam PF03061 Thioesterase superfamily 26 98 1.7E-20 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAA_02258 9dc1da1375a4e882bbcb305c11852cda 133 Gene3D G3DSA:3.10.129.10 1 133 7.2E-41 T 13-10-2018 VAA_02258 9dc1da1375a4e882bbcb305c11852cda 133 SUPERFAMILY SSF54637 9 131 3.6E-38 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03048 bfb013636f0d948164f5a50b8bebf3ff 403 Pfam PF00589 Phage integrase family 213 378 8.4E-19 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_03048 bfb013636f0d948164f5a50b8bebf3ff 403 SUPERFAMILY SSF56349 101 385 1.41E-51 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_03048 bfb013636f0d948164f5a50b8bebf3ff 403 Gene3D G3DSA:1.10.150.130 98 209 1.8E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_03048 bfb013636f0d948164f5a50b8bebf3ff 403 Pfam PF12167 Arm DNA-binding domain 1 64 8.2E-21 T 13-10-2018 IPR022000 Min27-like integrase, DNA-binding domain VAA_03048 bfb013636f0d948164f5a50b8bebf3ff 403 Gene3D G3DSA:1.10.443.10 210 394 2.2E-37 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_03048 bfb013636f0d948164f5a50b8bebf3ff 403 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 102 158 8.2E-5 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAA_00521 34b17fa61fb59cd4e48017539740b029 247 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 6 243 1.2E-80 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VAA_00521 34b17fa61fb59cd4e48017539740b029 247 PIRSF PIRSF004808 4 247 2.4E-72 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VAA_00521 34b17fa61fb59cd4e48017539740b029 247 Pfam PF00588 SpoU rRNA Methylase family 10 158 3.6E-33 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAA_00521 34b17fa61fb59cd4e48017539740b029 247 Gene3D G3DSA:1.10.8.590 171 247 8.3E-28 T 13-10-2018 VAA_00521 34b17fa61fb59cd4e48017539740b029 247 SUPERFAMILY SSF75217 9 171 9.16E-36 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_00521 34b17fa61fb59cd4e48017539740b029 247 Gene3D G3DSA:3.40.1280.10 5 169 1.3E-61 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_00952 da1984d58386154bfbfadb5a7c5400a5 352 Gene3D G3DSA:1.20.1530.20 9 345 2.6E-25 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VAA_00952 da1984d58386154bfbfadb5a7c5400a5 352 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 345 2.7E-141 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VAA_00952 da1984d58386154bfbfadb5a7c5400a5 352 Pfam PF01758 Sodium Bile acid symporter family 61 257 7.3E-62 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VAA_00952 da1984d58386154bfbfadb5a7c5400a5 352 PIRSF PIRSF005508 5 352 4.1E-138 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 Gene3D G3DSA:3.90.110.10 147 243 5.5E-27 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 238 1.3E-29 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 SUPERFAMILY SSF51735 1 145 2.37E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 234 2.2E-104 T 13-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 Gene3D G3DSA:3.40.50.720 1 146 2.4E-65 T 13-10-2018 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 13-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 SUPERFAMILY SSF56327 146 235 1.85E-22 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VAA_01685 3b5fd53e5d4016493c65b0aa50a1d604 244 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 4.3E-47 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_00021 6333ccf7b403fa5b35ac6f93eb812cd7 221 PIRSF PIRSF011491 2 221 7.4E-79 T 13-10-2018 IPR016584 Methyltransferase VrtF-like VAA_00021 6333ccf7b403fa5b35ac6f93eb812cd7 221 Pfam PF13489 Methyltransferase domain 54 193 2.4E-8 T 13-10-2018 VAA_00021 6333ccf7b403fa5b35ac6f93eb812cd7 221 SUPERFAMILY SSF53335 23 187 1.01E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00021 6333ccf7b403fa5b35ac6f93eb812cd7 221 Gene3D G3DSA:3.40.50.150 32 200 1.3E-13 T 13-10-2018 VAA_02384 7d4f5d4a8ec46e9f22022179e82e3c3a 112 Gene3D G3DSA:1.20.120.160 1 109 3.8E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_02384 7d4f5d4a8ec46e9f22022179e82e3c3a 112 SUPERFAMILY SSF47226 2 109 3.01E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_02384 7d4f5d4a8ec46e9f22022179e82e3c3a 112 Pfam PF01627 Hpt domain 24 102 2.4E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_02849 7ffc2494480944125b52a829ad79a811 694 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 54 520 5.4E-132 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VAA_02849 7ffc2494480944125b52a829ad79a811 694 Gene3D G3DSA:3.30.1920.30 240 303 2.6E-85 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 Gene3D G3DSA:2.40.50.230 374 473 5.5E-40 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VAA_02849 7ffc2494480944125b52a829ad79a811 694 SUPERFAMILY SSF69279 205 382 6.29E-43 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 SUPERFAMILY SSF69279 18 203 3.85E-50 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 Pfam PF05954 Phage late control gene D protein (GPD) 53 346 2.2E-78 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 Gene3D G3DSA:3.55.50.10 116 207 2.6E-85 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 SUPERFAMILY SSF69255 381 468 2.2E-32 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 19 538 1.7E-186 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VAA_02849 7ffc2494480944125b52a829ad79a811 694 SUPERFAMILY SSF69349 459 640 2.28E-44 T 13-10-2018 VAA_02849 7ffc2494480944125b52a829ad79a811 694 Gene3D G3DSA:2.30.110.50 25 348 2.6E-85 T 13-10-2018 VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 Gene3D G3DSA:3.20.20.450 401 636 1.1E-40 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 SUPERFAMILY SSF55073 243 384 5.73E-15 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 SMART SM00267 226 390 2.6E-9 T 13-10-2018 IPR000160 GGDEF domain VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.3E-38 T 13-10-2018 IPR032244 LapD/MoxY, periplasmic domain VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 382 2.2E-12 T 13-10-2018 IPR000160 GGDEF domain VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 SMART SM00052 403 635 4.5E-11 T 13-10-2018 IPR001633 EAL domain VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 381 2.2E-10 T 13-10-2018 IPR000160 GGDEF domain VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 SUPERFAMILY SSF141868 411 635 3.79E-41 T 13-10-2018 IPR035919 EAL domain superfamily VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 Gene3D G3DSA:3.30.70.270 221 387 2.1E-19 T 13-10-2018 VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 Gene3D G3DSA:3.30.1040.50 102 151 4.1E-18 T 13-10-2018 VAA_01915 28dda7e2b98f22fc1ee9b3a208788f2e 636 Pfam PF00563 EAL domain 411 634 1.6E-40 T 13-10-2018 IPR001633 EAL domain VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 6 303 3.9E-130 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 Gene3D G3DSA:3.40.50.450 6 289 5.3E-117 T 13-10-2018 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 242 264 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 123 140 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 141 159 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 96 112 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 196 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 34 47 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 161 177 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 215 227 6.4E-82 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 ProSitePatterns PS00433 Phosphofructokinase signature. 246 264 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 4 322 46.947 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 PIRSF PIRSF000532 3 322 3.8E-128 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 Pfam PF00365 Phosphofructokinase 6 278 1.2E-109 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 Gene3D G3DSA:3.40.50.460 145 254 5.3E-117 T 13-10-2018 VAA_02577 272f9e46ba28ce11400d19d7f8b208cd 322 SUPERFAMILY SSF53784 4 317 1.96E-113 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 SUPERFAMILY SSF53383 6 415 2.31E-182 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 Gene3D G3DSA:3.40.640.10 37 288 4.4E-184 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 Pfam PF00464 Serine hydroxymethyltransferase 9 385 2.5E-180 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 Gene3D G3DSA:3.90.1150.10 10 393 4.4E-184 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 PIRSF PIRSF000412 1 415 3.5E-166 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_01106 a07c7d0b486dac77e76bcd17d013eba0 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 51.819 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 SUPERFAMILY SSF55729 9 188 2.88E-38 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 Gene3D G3DSA:3.40.630.30 5 193 1.6E-51 T 13-10-2018 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 Pfam PF00765 Autoinducer synthase 14 187 5.4E-32 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 20 39 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 121 142 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 PRINTS PR01549 Autoinducer synthesis protein signature 143 164 1.8E-34 T 13-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_01246 c648f5af4094fdf4980c193d127e9a97 193 ProSitePatterns PS00949 Autoinducer synthase family signature. 24 49 - T 13-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_02696 3b1e92cac1bfcb91a1b48103e283c324 128 Gene3D G3DSA:3.90.1030.10 1 117 3.5E-48 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02696 3b1e92cac1bfcb91a1b48103e283c324 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02696 3b1e92cac1bfcb91a1b48103e283c324 128 SUPERFAMILY SSF64263 1 119 3.01E-51 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02696 3b1e92cac1bfcb91a1b48103e283c324 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.772 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02696 3b1e92cac1bfcb91a1b48103e283c324 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.5E-49 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02696 3b1e92cac1bfcb91a1b48103e283c324 128 Pfam PF01196 Ribosomal protein L17 20 116 6.4E-35 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03028 068bb2fb4e3a0875e3c1e59d21230afa 377 Gene3D G3DSA:3.40.50.2300 103 331 1.7E-25 T 13-10-2018 VAA_03028 068bb2fb4e3a0875e3c1e59d21230afa 377 Gene3D G3DSA:3.40.50.2300 167 351 1.7E-25 T 13-10-2018 VAA_03028 068bb2fb4e3a0875e3c1e59d21230afa 377 Pfam PF04392 ABC transporter substrate binding protein 97 357 2.3E-13 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein VAA_04299 a6c494720855c439c06802d14cb9f828 165 Pfam PF13275 S4 domain 36 99 4.9E-23 T 13-10-2018 VAA_04299 a6c494720855c439c06802d14cb9f828 165 SUPERFAMILY SSF55174 26 99 1.96E-18 T 13-10-2018 VAA_04299 a6c494720855c439c06802d14cb9f828 165 Gene3D G3DSA:3.10.290.10 28 100 6.1E-22 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_03737 f9f22a5dac237531f2d9859d0e6ced9c 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VAA_03737 f9f22a5dac237531f2d9859d0e6ced9c 130 SUPERFAMILY SSF54211 5 130 5.31E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_03737 f9f22a5dac237531f2d9859d0e6ced9c 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.602 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VAA_03737 f9f22a5dac237531f2d9859d0e6ced9c 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 9.4E-46 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VAA_03737 f9f22a5dac237531f2d9859d0e6ced9c 130 Gene3D G3DSA:3.30.230.10 1 130 3.0E-53 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03547 cfbd4313a215da996f7c778b3509a378 191 Pfam PF13580 SIS domain 24 146 6.6E-31 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_03547 cfbd4313a215da996f7c778b3509a378 191 Gene3D G3DSA:3.40.50.10490 1 191 1.9E-71 T 13-10-2018 VAA_03547 cfbd4313a215da996f7c778b3509a378 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.089 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VAA_03547 cfbd4313a215da996f7c778b3509a378 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 1.8E-82 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VAA_03547 cfbd4313a215da996f7c778b3509a378 191 SUPERFAMILY SSF53697 1 188 1.66E-52 T 13-10-2018 VAA_03526 9b1b57e89d64dd38779c7b2ba4f2cf1c 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 1.1E-49 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VAA_03526 9b1b57e89d64dd38779c7b2ba4f2cf1c 248 SMART SM00858 126 188 3.1E-6 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VAA_03526 9b1b57e89d64dd38779c7b2ba4f2cf1c 248 Gene3D G3DSA:2.30.30.760 188 248 7.7E-11 T 13-10-2018 VAA_03526 9b1b57e89d64dd38779c7b2ba4f2cf1c 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 247 3.3E-36 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VAA_01764 254bd813b64baeb21195cb81781c794b 193 SUPERFAMILY SSF57783 69 103 1.87E-12 T 13-10-2018 VAA_01764 254bd813b64baeb21195cb81781c794b 193 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 70 102 2.2E-15 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_01764 254bd813b64baeb21195cb81781c794b 193 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 116 153 6.3E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_01764 254bd813b64baeb21195cb81781c794b 193 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 157 173 0.37 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_01764 254bd813b64baeb21195cb81781c794b 193 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 24 60 2.3E-16 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_01764 254bd813b64baeb21195cb81781c794b 193 SUPERFAMILY SSF57783 20 67 4.25E-14 T 13-10-2018 VAA_01764 254bd813b64baeb21195cb81781c794b 193 Gene3D G3DSA:3.30.65.10 15 62 6.7E-8 T 13-10-2018 VAA_01764 254bd813b64baeb21195cb81781c794b 193 Gene3D G3DSA:3.30.65.10 63 108 1.4E-8 T 13-10-2018 VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 SUPERFAMILY SSF51735 3 240 3.21E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.8E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.8E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.8E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.8E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.8E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.4E-56 T 13-10-2018 VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0024 T 13-10-2018 VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 Gene3D G3DSA:3.40.50.720 3 241 1.5E-71 T 13-10-2018 VAA_03272 91655ca53e39480ea4aed80fb2e495ff 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 2.0E-125 T 13-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 6 383 74.323 T 13-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 Gene3D G3DSA:3.40.1350.30 61 219 1.9E-74 T 13-10-2018 VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 315 346 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 SUPERFAMILY SSF53335 7 382 1.57E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 216 382 1.2E-17 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 7 375 4.8E-58 T 13-10-2018 VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 7 382 1.6E-176 T 13-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 VAA_00973 e569d1ef61d96ecdbbd626d1f960b31b 387 Gene3D G3DSA:3.40.50.150 19 376 1.9E-74 T 13-10-2018 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 SUPERFAMILY SSF50475 13 211 1.16E-63 T 13-10-2018 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 PIRSF PIRSF000190 1 211 2.3E-79 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 Gene3D G3DSA:2.30.110.10 13 211 7.0E-76 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 36.234 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 1.3E-86 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 5.9E-18 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01918 ed9b60de37a5041ea8dba3b728c0b60c 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 2.4E-23 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 Pfam PF03459 TOBE domain 294 360 1.6E-11 T 13-10-2018 IPR005116 Transport-associated OB, type 1 VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 5 360 4.8E-140 T 13-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 Gene3D G3DSA:3.40.50.300 3 229 7.0E-53 T 13-10-2018 VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 Gene3D G3DSA:2.40.50.100 293 361 7.2E-12 T 13-10-2018 VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 SUPERFAMILY SSF50331 238 360 4.13E-16 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 SUPERFAMILY SSF52540 11 238 2.41E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 SMART SM00382 26 208 8.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01577 89cb22835140d42a3cc0da5d29121cfb 369 Pfam PF00005 ABC transporter 22 159 2.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 Gene3D G3DSA:3.40.50.1220 197 368 2.0E-33 T 13-10-2018 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 SUPERFAMILY SSF52518 15 184 2.31E-45 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01316 b81b58465a414410ef62399d8b7c4927 578 SUPERFAMILY SSF52467 199 361 4.36E-32 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_01316 b81b58465a414410ef62399d8b7c4927 578 SUPERFAMILY SSF52518 378 567 9.43E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01316 b81b58465a414410ef62399d8b7c4927 578 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 438 457 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 401 546 1.9E-39 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 Gene3D G3DSA:3.40.50.970 374 571 4.5E-54 T 13-10-2018 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 21 558 1.4E-262 T 13-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 205 337 1.2E-23 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 Gene3D G3DSA:3.40.50.970 11 192 8.7E-63 T 13-10-2018 VAA_01316 b81b58465a414410ef62399d8b7c4927 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 20 184 1.3E-48 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAA_01555 99733cec7efb94a0484a8cb7715b8238 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 13-10-2018 IPR010019 Integral membrane protein, YccS VAA_01555 99733cec7efb94a0484a8cb7715b8238 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 8.2E-242 T 13-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VAA_01555 99733cec7efb94a0484a8cb7715b8238 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 1.1E-113 T 13-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VAA_01555 99733cec7efb94a0484a8cb7715b8238 717 Pfam PF13515 Fusaric acid resistance protein-like 405 524 3.8E-23 T 13-10-2018 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Gene3D G3DSA:1.20.120.960 40 148 1.9E-13 T 13-10-2018 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 564 3.3E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 SMART SM00387 474 567 3.5E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 PIRSF PIRSF003167 1 573 2.4E-177 T 13-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Gene3D G3DSA:1.10.287.130 174 278 7.8E-7 T 13-10-2018 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Pfam PF07730 Histidine kinase 365 433 7.6E-17 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Gene3D G3DSA:3.30.565.10 434 571 2.3E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 SMART SM00304 176 228 3.3E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 SUPERFAMILY SSF55874 447 561 6.29E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 130 3.6E-24 T 13-10-2018 IPR029095 NarX-like, N-terminal VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 Pfam PF00672 HAMP domain 178 223 2.9E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01058 6c400c0cd680155dd116f3c8cfa328b9 574 SUPERFAMILY SSF158472 178 225 1.01E-7 T 13-10-2018 VAA_00068 52bc9d29e86f4f8379154f62f518df7e 139 Gene3D G3DSA:3.40.630.30 5 135 4.0E-21 T 13-10-2018 VAA_00068 52bc9d29e86f4f8379154f62f518df7e 139 SUPERFAMILY SSF55729 18 124 2.13E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00068 52bc9d29e86f4f8379154f62f518df7e 139 Pfam PF13673 Acetyltransferase (GNAT) domain 32 125 2.8E-11 T 13-10-2018 IPR000182 GNAT domain VAA_01212 9c04d9ecd8418fdfbc231340d2d0f70f 591 Pfam PF01420 Type I restriction modification DNA specificity domain 281 452 6.2E-15 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAA_01212 9c04d9ecd8418fdfbc231340d2d0f70f 591 Pfam PF01420 Type I restriction modification DNA specificity domain 26 184 1.0E-19 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAA_01212 9c04d9ecd8418fdfbc231340d2d0f70f 591 SUPERFAMILY SSF116734 269 486 8.83E-36 T 13-10-2018 VAA_01212 9c04d9ecd8418fdfbc231340d2d0f70f 591 SUPERFAMILY SSF116734 25 219 2.78E-35 T 13-10-2018 VAA_01212 9c04d9ecd8418fdfbc231340d2d0f70f 591 Gene3D G3DSA:3.90.220.20 10 212 3.0E-32 T 13-10-2018 VAA_01212 9c04d9ecd8418fdfbc231340d2d0f70f 591 Gene3D G3DSA:3.90.220.20 261 477 5.3E-27 T 13-10-2018 VAA_02479 2a98ad550795ca8f876a1b455d00e7b8 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 3.0E-86 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VAA_02479 2a98ad550795ca8f876a1b455d00e7b8 181 Gene3D G3DSA:2.60.120.10 1 180 9.1E-78 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02479 2a98ad550795ca8f876a1b455d00e7b8 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 1.0E-100 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VAA_02479 2a98ad550795ca8f876a1b455d00e7b8 181 SUPERFAMILY SSF51182 1 179 2.14E-81 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_02479 2a98ad550795ca8f876a1b455d00e7b8 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 3.8E-77 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VAA_00996 54defc1734a1a71440a0adca12f38408 237 Pfam PF07885 Ion channel 145 228 2.1E-16 T 13-10-2018 IPR013099 Potassium channel domain VAA_00996 54defc1734a1a71440a0adca12f38408 237 Gene3D G3DSA:1.10.287.70 135 235 3.2E-19 T 13-10-2018 VAA_00996 54defc1734a1a71440a0adca12f38408 237 SUPERFAMILY SSF81324 137 229 1.57E-17 T 13-10-2018 VAA_00888 0034962a4b82cf52f789b0eb440da335 239 Gene3D G3DSA:3.10.200.10 22 237 2.0E-76 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VAA_00888 0034962a4b82cf52f789b0eb440da335 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 236 5.6E-48 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain VAA_00888 0034962a4b82cf52f789b0eb440da335 239 SUPERFAMILY SSF51069 22 236 7.38E-72 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VAA_00888 0034962a4b82cf52f789b0eb440da335 239 SMART SM01057 23 236 1.1E-90 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain VAA_03349 dc44c3f8da39b9118eed4e979c578bb1 194 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.384 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_03349 dc44c3f8da39b9118eed4e979c578bb1 194 PIRSF PIRSF006305 1 193 7.4E-47 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_03349 dc44c3f8da39b9118eed4e979c578bb1 194 Pfam PF02545 Maf-like protein 5 187 3.2E-46 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_03349 dc44c3f8da39b9118eed4e979c578bb1 194 SUPERFAMILY SSF52972 1 186 5.04E-58 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_03349 dc44c3f8da39b9118eed4e979c578bb1 194 Gene3D G3DSA:3.90.950.10 5 193 6.4E-59 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_03349 dc44c3f8da39b9118eed4e979c578bb1 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 4.9E-52 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VAA_01610 ebbeead89b398b6c042d8bccb013c928 179 SUPERFAMILY SSF81342 5 175 2.2E-35 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAA_01610 ebbeead89b398b6c042d8bccb013c928 179 Gene3D G3DSA:1.20.950.20 1 76 1.8E-5 T 13-10-2018 VAA_01610 ebbeead89b398b6c042d8bccb013c928 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 5.0E-29 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAA_00453 a686ebd9a9bc768d4b2d866f3af21a66 106 Pfam PF00581 Rhodanese-like domain 10 98 1.0E-12 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_00453 a686ebd9a9bc768d4b2d866f3af21a66 106 SUPERFAMILY SSF52821 1 105 1.83E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_00453 a686ebd9a9bc768d4b2d866f3af21a66 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.233 T 13-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VAA_00453 a686ebd9a9bc768d4b2d866f3af21a66 106 SMART SM00450 7 102 1.2E-17 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_00453 a686ebd9a9bc768d4b2d866f3af21a66 106 Gene3D G3DSA:3.40.250.10 1 100 5.6E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_03312 dff2d5c8176c62e7249f2f6eb2bbace9 132 Pfam PF04134 Protein of unknown function, DUF393 8 116 1.4E-22 T 13-10-2018 IPR007263 Protein of unknown function DUF393 VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 SUPERFAMILY SSF55129 1 58 2.35E-23 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 Gene3D G3DSA:3.30.1390.20 1 58 5.5E-28 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 13-10-2018 IPR018038 Ribosomal protein L30, conserved site VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.3E-26 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 5.0E-21 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.117 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02688 84ce8c61d575a65c708ff6e7bc770eb4 58 PIRSF PIRSF002211 1 58 1.6E-28 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03360 50c8a1d92ee473787770c909e79534e4 74 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.2E-20 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAA_03360 50c8a1d92ee473787770c909e79534e4 74 Gene3D G3DSA:1.10.3390.10 1 74 1.0E-30 T 13-10-2018 IPR023202 YejL-like superfamily VAA_03360 50c8a1d92ee473787770c909e79534e4 74 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAA_03360 50c8a1d92ee473787770c909e79534e4 74 PIRSF PIRSF006188 1 72 9.1E-35 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAA_03360 50c8a1d92ee473787770c909e79534e4 74 SUPERFAMILY SSF158651 1 72 4.84E-28 T 13-10-2018 IPR023202 YejL-like superfamily VAA_03360 50c8a1d92ee473787770c909e79534e4 74 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.843 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VAA_00139 fb673a71aff6b90251f05187608c4da4 69 Pfam PF01381 Helix-turn-helix 15 67 3.3E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00139 fb673a71aff6b90251f05187608c4da4 69 SMART SM00530 12 67 1.5E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00139 fb673a71aff6b90251f05187608c4da4 69 SUPERFAMILY SSF47413 5 68 9.57E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00139 fb673a71aff6b90251f05187608c4da4 69 Gene3D G3DSA:1.10.260.40 1 69 1.6E-21 T 13-10-2018 VAA_02104 f77acd12c7a6e9f85ad99451138a1d49 528 Gene3D G3DSA:3.40.50.720 379 527 1.0E-32 T 13-10-2018 VAA_02104 f77acd12c7a6e9f85ad99451138a1d49 528 Gene3D G3DSA:1.20.1530.20 2 363 5.9E-43 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VAA_02104 f77acd12c7a6e9f85ad99451138a1d49 528 Pfam PF00999 Sodium/hydrogen exchanger family 3 348 3.3E-33 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAA_02104 f77acd12c7a6e9f85ad99451138a1d49 528 Pfam PF02254 TrkA-N domain 388 504 7.7E-18 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VAA_02104 f77acd12c7a6e9f85ad99451138a1d49 528 SUPERFAMILY SSF51735 387 517 7.88E-14 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03414 a38fdcde6dfbcf168e08e077beaa4164 115 Gene3D G3DSA:1.20.1300.10 1 115 6.5E-30 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03414 a38fdcde6dfbcf168e08e077beaa4164 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.9E-34 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VAA_03414 a38fdcde6dfbcf168e08e077beaa4164 115 SUPERFAMILY SSF81343 4 114 1.54E-26 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03414 a38fdcde6dfbcf168e08e077beaa4164 115 PIRSF PIRSF000169 1 115 3.7E-38 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VAA_03414 a38fdcde6dfbcf168e08e077beaa4164 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 102 2.0E-6 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_00461 0125ea8c58204d1b415f7f49396cfadf 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 1.1E-68 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_00461 0125ea8c58204d1b415f7f49396cfadf 447 Pfam PF01554 MatE 24 184 5.3E-23 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_00461 0125ea8c58204d1b415f7f49396cfadf 447 Pfam PF01554 MatE 251 399 1.1E-13 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_00534 1642e6514308162d6b6859b28e8c2a15 278 Pfam PF03932 CutC family 37 236 1.2E-78 T 13-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAA_00534 1642e6514308162d6b6859b28e8c2a15 278 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 36 238 29.448 T 13-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAA_00534 1642e6514308162d6b6859b28e8c2a15 278 Gene3D G3DSA:3.20.20.380 35 278 7.1E-84 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAA_00534 1642e6514308162d6b6859b28e8c2a15 278 SUPERFAMILY SSF110395 36 277 3.4E-71 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VAA_02869 54a57a1ff63f67d35bdad8fc34276f3c 522 Pfam PF00672 HAMP domain 192 240 2.1E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_02869 54a57a1ff63f67d35bdad8fc34276f3c 522 Gene3D G3DSA:1.10.287.950 190 521 2.3E-55 T 13-10-2018 VAA_02869 54a57a1ff63f67d35bdad8fc34276f3c 522 SMART SM00283 259 520 1.2E-35 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02869 54a57a1ff63f67d35bdad8fc34276f3c 522 SUPERFAMILY SSF58104 212 520 4.58E-58 T 13-10-2018 VAA_02869 54a57a1ff63f67d35bdad8fc34276f3c 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 317 485 3.8E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02869 54a57a1ff63f67d35bdad8fc34276f3c 522 SMART SM00304 190 244 9.9E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01996 9c4b396e663c98f6a46f0f0c2fc82704 497 Pfam PF11066 Protein of unknown function (DUF2867) 352 485 9.3E-14 T 13-10-2018 IPR021295 Protein of unknown function DUF2867 VAA_01996 9c4b396e663c98f6a46f0f0c2fc82704 497 SUPERFAMILY SSF51735 21 311 2.25E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01996 9c4b396e663c98f6a46f0f0c2fc82704 497 Gene3D G3DSA:3.40.50.720 22 267 5.9E-32 T 13-10-2018 VAA_01996 9c4b396e663c98f6a46f0f0c2fc82704 497 Pfam PF13460 NAD(P)H-binding 28 167 1.3E-13 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_01818 02145167387dfe5ea9629dfdd01e7380 210 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 20 205 29.968 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VAA_01818 02145167387dfe5ea9629dfdd01e7380 210 Gene3D G3DSA:3.90.550.10 19 207 7.4E-57 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01818 02145167387dfe5ea9629dfdd01e7380 210 SUPERFAMILY SSF53448 25 202 2.82E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01818 02145167387dfe5ea9629dfdd01e7380 210 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 23 203 3.8E-74 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VAA_01818 02145167387dfe5ea9629dfdd01e7380 210 Pfam PF12804 MobA-like NTP transferase domain 25 176 3.3E-35 T 13-10-2018 IPR025877 MobA-like NTP transferase VAA_03084 bfb224fc73fc6e75ce8096dc116aa1b6 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 35.542 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAA_03084 bfb224fc73fc6e75ce8096dc116aa1b6 342 Gene3D G3DSA:1.10.1610.10 13 340 1.2E-121 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAA_03084 bfb224fc73fc6e75ce8096dc116aa1b6 342 SUPERFAMILY SSF52733 3 341 2.35E-109 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAA_03084 bfb224fc73fc6e75ce8096dc116aa1b6 342 Pfam PF02277 Phosphoribosyltransferase 3 340 3.9E-126 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAA_03084 bfb224fc73fc6e75ce8096dc116aa1b6 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4 340 7.1E-129 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VAA_03084 bfb224fc73fc6e75ce8096dc116aa1b6 342 Gene3D G3DSA:3.40.50.10210 51 323 1.2E-121 T 13-10-2018 VAA_02791 f3e95e2bd5fe75a681622c8efbf4ea47 176 Pfam PF05068 Mannitol repressor 7 171 3.3E-61 T 13-10-2018 IPR007761 Mannitol repressor MtlR-like VAA_02791 f3e95e2bd5fe75a681622c8efbf4ea47 176 Gene3D G3DSA:1.20.120.330 1 172 1.7E-68 T 13-10-2018 VAA_02791 f3e95e2bd5fe75a681622c8efbf4ea47 176 SUPERFAMILY SSF158668 4 171 1.31E-56 T 13-10-2018 IPR038026 MtlR-like superfamily VAA_01967 2ab28c0dec2d7e4c92eb600ed6ce3b5c 337 Pfam PF01757 Acyltransferase family 7 327 1.3E-34 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VAA_01238 9685325711391203c86cae3305e92124 363 SUPERFAMILY SSF52540 131 319 4.95E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01238 9685325711391203c86cae3305e92124 363 SMART SM00487 128 306 7.7E-16 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_01238 9685325711391203c86cae3305e92124 363 Gene3D G3DSA:3.30.870.10 2 107 5.2E-8 T 13-10-2018 VAA_01238 9685325711391203c86cae3305e92124 363 Gene3D G3DSA:3.40.50.300 115 295 6.6E-45 T 13-10-2018 VAA_01238 9685325711391203c86cae3305e92124 363 Pfam PF04851 Type III restriction enzyme, res subunit 132 279 6.3E-31 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VAA_03767 81f92aa5b73ba0409f79621433341102 740 Gene3D G3DSA:1.10.3210.10 32 205 5.5E-36 T 13-10-2018 VAA_03767 81f92aa5b73ba0409f79621433341102 740 Gene3D G3DSA:3.30.70.260 661 740 1.2E-14 T 13-10-2018 VAA_03767 81f92aa5b73ba0409f79621433341102 740 Pfam PF02824 TGS domain 403 462 3.3E-21 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VAA_03767 81f92aa5b73ba0409f79621433341102 740 SUPERFAMILY SSF55021 663 738 5.5E-9 T 13-10-2018 VAA_03767 81f92aa5b73ba0409f79621433341102 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 738 6.2E-182 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 VAA_03767 81f92aa5b73ba0409f79621433341102 740 SUPERFAMILY SSF81271 396 462 1.55E-20 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VAA_03767 81f92aa5b73ba0409f79621433341102 740 Pfam PF13291 ACT domain 662 738 1.2E-15 T 13-10-2018 IPR002912 ACT domain VAA_03767 81f92aa5b73ba0409f79621433341102 740 Gene3D G3DSA:3.30.460.10 207 340 5.5E-49 T 13-10-2018 VAA_03767 81f92aa5b73ba0409f79621433341102 740 SUPERFAMILY SSF109604 36 205 2.98E-43 T 13-10-2018 VAA_03767 81f92aa5b73ba0409f79621433341102 740 Gene3D G3DSA:3.10.20.30 397 470 1.4E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_03767 81f92aa5b73ba0409f79621433341102 740 Pfam PF13328 HD domain 57 190 2.9E-36 T 13-10-2018 IPR003607 HD/PDEase domain VAA_03767 81f92aa5b73ba0409f79621433341102 740 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.7E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VAA_03767 81f92aa5b73ba0409f79621433341102 740 SMART SM00954 250 360 4.3E-64 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VAA_03767 81f92aa5b73ba0409f79621433341102 740 SUPERFAMILY SSF81301 195 407 1.57E-59 T 13-10-2018 VAA_04002 8660482ad5a5719a331fa07a4c9c6641 204 Pfam PF13737 Transposase DDE domain 19 129 8.7E-46 T 13-10-2018 IPR025668 Transposase DDE domain VAA_02863 ce903fc3411288eda7ecc4a162f2f674 155 Gene3D G3DSA:1.10.10.10 39 155 2.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02863 ce903fc3411288eda7ecc4a162f2f674 155 SMART SM00345 46 105 3.2E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02863 ce903fc3411288eda7ecc4a162f2f674 155 Pfam PF00392 Bacterial regulatory proteins, gntR family 45 105 1.0E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VAA_02863 ce903fc3411288eda7ecc4a162f2f674 155 SUPERFAMILY SSF46785 34 116 1.59E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03369 f73acce619b33b73827684ee3bc5fea5 188 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 22 184 7.5E-64 T 13-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VAA_01590 45821512c1c51b9b791372844bfe9825 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 2.9E-13 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 VAA_03418 d4191e7f79f4b450b36132781b9ec4f8 251 Gene3D G3DSA:3.40.1390.30 14 236 3.7E-83 T 13-10-2018 VAA_03418 d4191e7f79f4b450b36132781b9ec4f8 251 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 238 5.0E-61 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VAA_03418 d4191e7f79f4b450b36132781b9ec4f8 251 SUPERFAMILY SSF102705 1 250 3.27E-83 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VAA_03418 d4191e7f79f4b450b36132781b9ec4f8 251 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 250 5.7E-69 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VAA_03418 d4191e7f79f4b450b36132781b9ec4f8 251 Gene3D G3DSA:3.40.1390.30 97 222 3.7E-83 T 13-10-2018 VAA_00157 92857d11bac5e85afc9c17c20167c83e 212 Gene3D G3DSA:1.20.120.1760 3 199 2.2E-20 T 13-10-2018 VAA_00157 92857d11bac5e85afc9c17c20167c83e 212 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 4.7E-8 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAA_00157 92857d11bac5e85afc9c17c20167c83e 212 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VAA_02417 199a94eaf3523b044f22065fa38d4442 100 Pfam PF12305 Protein of unknown function (DUF3630) 5 96 8.6E-39 T 13-10-2018 IPR022080 Protein of unknown function DUF3630 VAA_02383 24f0dda3ed3be077ccdd310b6734eaeb 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.399 T 13-10-2018 IPR010119 Gluconeogenesis factor VAA_02383 24f0dda3ed3be077ccdd310b6734eaeb 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 271 6.9E-104 T 13-10-2018 IPR010119 Gluconeogenesis factor VAA_02383 24f0dda3ed3be077ccdd310b6734eaeb 296 Gene3D G3DSA:3.40.50.12300 4 296 2.0E-79 T 13-10-2018 IPR038136 Gluconeogenesis factor superfamily VAA_02383 24f0dda3ed3be077ccdd310b6734eaeb 296 SUPERFAMILY SSF142338 7 291 1.96E-84 T 13-10-2018 VAA_02383 24f0dda3ed3be077ccdd310b6734eaeb 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 285 1.7E-75 T 13-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 Gene3D G3DSA:3.40.50.300 282 534 3.6E-53 T 13-10-2018 VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 SMART SM00382 344 512 5.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 SMART SM00382 26 238 9.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 SUPERFAMILY SSF52540 311 524 4.39E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 Pfam PF00005 ABC transporter 339 467 3.2E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 Pfam PF12848 ABC transporter 224 305 1.5E-20 T 13-10-2018 IPR032781 ABC-transporter extension domain VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 Pfam PF00005 ABC transporter 18 184 2.1E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 Gene3D G3DSA:3.40.50.300 3 281 4.2E-54 T 13-10-2018 VAA_04304 c22de5b18bfbd9efd41832ecbbad571d 534 SUPERFAMILY SSF52540 6 238 1.41E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03640 f4a68cb9948ee8e6196e07e3eb071ff5 99 Gene3D G3DSA:1.10.10.710 21 95 7.5E-7 T 13-10-2018 IPR038627 YebG-like superfamily VAA_03640 f4a68cb9948ee8e6196e07e3eb071ff5 99 Pfam PF07130 YebG protein 1 72 4.6E-31 T 13-10-2018 IPR009813 Uncharacterised protein family YebG VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.8E-75 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 Pfam PF00355 Rieske [2Fe-2S] domain 56 174 4.8E-12 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 Gene3D G3DSA:2.102.10.10 43 190 3.6E-47 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 Gene3D G3DSA:1.20.5.510 1 40 1.5E-5 T 13-10-2018 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 9.4E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 9.4E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 9.4E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VAA_03736 5349014dc701e34e5e851ab43b6e76e8 198 SUPERFAMILY SSF50022 30 193 2.91E-45 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VAA_01518 f5204f3649931a777f6a6fc40708ed16 395 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01518 f5204f3649931a777f6a6fc40708ed16 395 Gene3D G3DSA:3.40.50.300 34 336 1.3E-69 T 13-10-2018 VAA_01518 f5204f3649931a777f6a6fc40708ed16 395 SUPERFAMILY SSF52540 42 273 2.85E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01518 f5204f3649931a777f6a6fc40708ed16 395 Pfam PF00005 ABC transporter 43 195 3.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01518 f5204f3649931a777f6a6fc40708ed16 395 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 387 2.3E-182 T 13-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 VAA_01518 f5204f3649931a777f6a6fc40708ed16 395 SMART SM00382 52 253 6.7E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.3E-136 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 Gene3D G3DSA:2.30.42.10 126 221 9.8E-30 T 13-10-2018 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 Pfam PF02163 Peptidase family M50 11 440 8.7E-86 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 Gene3D G3DSA:2.30.42.10 225 313 6.2E-20 T 13-10-2018 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 Pfam PF13180 PDZ domain 225 289 8.8E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 SUPERFAMILY SSF50156 195 291 2.76E-17 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 SMART SM00228 115 186 0.0012 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 SMART SM00228 212 281 8.5E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VAA_03570 c8a1b9c6126e2d837cc59a03669c9dfd 452 SUPERFAMILY SSF50156 91 186 1.45E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 ProSitePatterns PS00455 Putative AMP-binding domain signature. 305 316 - T 13-10-2018 IPR020845 AMP-binding, conserved site VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 Pfam PF13193 AMP-binding enzyme C-terminal domain 574 648 3.3E-5 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 SUPERFAMILY SSF56801 59 679 7.98E-122 T 13-10-2018 VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 Gene3D G3DSA:3.40.50.12780 100 556 8.0E-58 T 13-10-2018 VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 31 676 2.0E-242 T 13-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 Gene3D G3DSA:3.30.300.30 560 682 2.7E-14 T 13-10-2018 VAA_02976 9865cd0f34a13758634ffc055702c3f8 683 Pfam PF00501 AMP-binding enzyme 132 560 9.6E-47 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VAA_01576 081b19d81fd9c3db4c4577ca91fe8700 229 Gene3D G3DSA:1.10.3720.10 2 225 8.1E-61 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01576 081b19d81fd9c3db4c4577ca91fe8700 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 221 1.8E-74 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VAA_01576 081b19d81fd9c3db4c4577ca91fe8700 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 223 8.6E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01576 081b19d81fd9c3db4c4577ca91fe8700 229 SUPERFAMILY SSF161098 5 217 5.1E-51 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00944 b8aca9f70f5feba18d61af3fff01bcda 128 Gene3D G3DSA:1.20.120.10 22 118 6.0E-9 T 13-10-2018 VAA_00944 b8aca9f70f5feba18d61af3fff01bcda 128 Pfam PF07361 Cytochrome b562 23 118 3.6E-27 T 13-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VAA_00944 b8aca9f70f5feba18d61af3fff01bcda 128 SUPERFAMILY SSF47175 23 118 7.53E-26 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VAA_01603 6a6a769ec5c346b5f31108e708b03558 627 Gene3D G3DSA:3.10.105.10 335 593 7.9E-221 T 13-10-2018 VAA_01603 6a6a769ec5c346b5f31108e708b03558 627 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 121 530 3.8E-79 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_01603 6a6a769ec5c346b5f31108e708b03558 627 SUPERFAMILY SSF53850 74 614 8.27E-114 T 13-10-2018 VAA_01603 6a6a769ec5c346b5f31108e708b03558 627 Gene3D G3DSA:3.40.190.10 52 613 7.9E-221 T 13-10-2018 VAA_01603 6a6a769ec5c346b5f31108e708b03558 627 PIRSF PIRSF002741 22 618 8.8E-128 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 Gene3D G3DSA:2.30.30.40 39 157 4.1E-29 T 13-10-2018 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 Pfam PF00072 Response regulator receiver domain 198 318 1.1E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 Gene3D G3DSA:3.40.50.2300 191 326 1.7E-28 T 13-10-2018 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 SUPERFAMILY SSF50341 10 168 3.79E-33 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 SMART SM00260 17 163 4.6E-28 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 PIRSF PIRSF002867 2 327 1.4E-100 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 SUPERFAMILY SSF52172 196 312 7.83E-28 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 Gene3D G3DSA:2.40.50.180 47 163 4.1E-29 T 13-10-2018 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 Pfam PF01584 CheW-like domain 40 165 1.8E-30 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03054 ce3da6bf6566648cf1b2e86f026d7fc9 327 SMART SM00448 196 321 4.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 Pfam PF00990 Diguanylate cyclase, GGDEF domain 143 298 3.7E-38 T 13-10-2018 IPR000160 GGDEF domain VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 SMART SM00091 16 82 2.6E-5 T 13-10-2018 IPR000014 PAS domain VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 300 1.5E-44 T 13-10-2018 IPR000160 GGDEF domain VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 Pfam PF08448 PAS fold 22 131 3.4E-14 T 13-10-2018 IPR013656 PAS fold-4 VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 Gene3D G3DSA:3.30.450.20 16 139 3.4E-16 T 13-10-2018 VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 Gene3D G3DSA:3.30.70.270 140 304 1.8E-48 T 13-10-2018 VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 SUPERFAMILY SSF55073 148 303 2.04E-42 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 SMART SM00267 132 302 1.2E-47 T 13-10-2018 IPR000160 GGDEF domain VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 139 1.1E-7 T 13-10-2018 IPR000014 PAS domain VAA_01243 5ddc0a6ed106bd2ee95fa6fad2194a96 305 SUPERFAMILY SSF55785 22 133 1.45E-15 T 13-10-2018 IPR035965 PAS domain superfamily VAA_02906 24507f41e93a0e5833faeaf47b5315b3 375 Gene3D G3DSA:3.60.10.10 54 373 3.7E-29 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_02906 24507f41e93a0e5833faeaf47b5315b3 375 SUPERFAMILY SSF56219 53 369 7.56E-31 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VAA_02906 24507f41e93a0e5833faeaf47b5315b3 375 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 83 329 3.7E-11 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VAA_00439 d0a855c92bd148a6221c438bd9e48e67 249 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 221 5.5E-57 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VAA_00439 d0a855c92bd148a6221c438bd9e48e67 249 Gene3D G3DSA:3.60.140.10 1 228 1.1E-79 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VAA_00439 d0a855c92bd148a6221c438bd9e48e67 249 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 221 4.3E-65 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VAA_00439 d0a855c92bd148a6221c438bd9e48e67 249 SUPERFAMILY SSF64438 3 221 7.69E-72 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VAA_03406 53b304d0f38de6dbfcb683ee8a9aa78b 259 Gene3D G3DSA:1.10.3470.10 5 257 1.9E-7 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_03406 53b304d0f38de6dbfcb683ee8a9aa78b 259 Pfam PF00950 ABC 3 transport family 1 256 1.6E-75 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VAA_03406 53b304d0f38de6dbfcb683ee8a9aa78b 259 SUPERFAMILY SSF81345 2 252 3.79E-39 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_01940 39b47d34128359a9e3b3b24d396cd64e 736 Gene3D G3DSA:3.20.20.80 184 726 9.2E-117 T 13-10-2018 VAA_01940 39b47d34128359a9e3b3b24d396cd64e 736 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 138 725 2.4E-189 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VAA_01940 39b47d34128359a9e3b3b24d396cd64e 736 SUPERFAMILY SSF51445 172 728 5.95E-146 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01940 39b47d34128359a9e3b3b24d396cd64e 736 Pfam PF02446 4-alpha-glucanotransferase 188 709 1.1E-124 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 SUPERFAMILY SSF51206 23 162 2.23E-31 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.5E-17 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 SMART SM00100 30 151 1.9E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 Gene3D G3DSA:1.10.10.10 165 250 3.6E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 SUPERFAMILY SSF46785 165 244 4.63E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 Gene3D G3DSA:2.60.120.10 43 164 4.5E-49 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 5.7E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_01841 2eea590c28d1ec7888ac41671eaea57e 250 SMART SM00419 187 235 4.3E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VAA_03656 dab117f4d12f8414b5584a044006e278 382 PIRSF PIRSF004810 1 382 3.0E-115 T 13-10-2018 IPR014047 Chromate transporter, long chain VAA_03656 dab117f4d12f8414b5584a044006e278 382 Pfam PF02417 Chromate transporter 213 376 6.6E-34 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VAA_03656 dab117f4d12f8414b5584a044006e278 382 Pfam PF02417 Chromate transporter 5 170 1.8E-32 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VAA_03656 dab117f4d12f8414b5584a044006e278 382 TIGRFAM TIGR00937 2A51: chromate efflux transporter 10 376 2.4E-94 T 13-10-2018 IPR014047 Chromate transporter, long chain VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 SMART SM00487 132 318 3.1E-13 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 Gene3D G3DSA:3.40.50.300 331 525 1.4E-32 T 13-10-2018 VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 Gene3D G3DSA:3.40.50.300 105 316 3.5E-26 T 13-10-2018 VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 Pfam PF00270 DEAD/DEAH box helicase 137 286 4.7E-15 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 Pfam PF00271 Helicase conserved C-terminal domain 406 506 1.1E-6 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 SUPERFAMILY SSF52540 148 519 3.49E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00134 e8408f969a211e10c8cf8b1e954b7991 841 SMART SM00490 426 508 1.8E-10 T 13-10-2018 IPR001650 Helicase, C-terminal VAA_01458 db932b07315cb7b4a260442157bf8397 934 SUPERFAMILY SSF53067 6 208 7.77E-30 T 13-10-2018 VAA_01458 db932b07315cb7b4a260442157bf8397 934 PRINTS PR00301 70kDa heat shock protein signature 232 242 2.0E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01458 db932b07315cb7b4a260442157bf8397 934 PRINTS PR00301 70kDa heat shock protein signature 165 185 2.0E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01458 db932b07315cb7b4a260442157bf8397 934 PRINTS PR00301 70kDa heat shock protein signature 6 19 2.0E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01458 db932b07315cb7b4a260442157bf8397 934 SUPERFAMILY SSF53067 223 456 1.15E-18 T 13-10-2018 VAA_01458 db932b07315cb7b4a260442157bf8397 934 Pfam PF00012 Hsp70 protein 133 316 3.7E-14 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VAA_01458 db932b07315cb7b4a260442157bf8397 934 Pfam PF12531 DNA-K related protein 684 931 8.0E-101 T 13-10-2018 IPR021030 Protein of unknown function DUF3731 VAA_03804 e2ed14f22e27374ab2181adf1a4bd9a0 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 4.2E-99 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VAA_03804 e2ed14f22e27374ab2181adf1a4bd9a0 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.059 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VAA_03804 e2ed14f22e27374ab2181adf1a4bd9a0 200 SUPERFAMILY SSF52016 1 196 1.45E-60 T 13-10-2018 VAA_03804 e2ed14f22e27374ab2181adf1a4bd9a0 200 Gene3D G3DSA:3.20.19.10 1 180 3.9E-77 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VAA_03804 e2ed14f22e27374ab2181adf1a4bd9a0 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.4E-38 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 SUPERFAMILY SSF52833 116 191 1.77E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 Pfam PF00462 Glutaredoxin 116 181 5.9E-14 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 ProSitePatterns PS00195 Glutaredoxin active site. 117 133 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 PRINTS PR00160 Glutaredoxin signature 178 191 3.0E-7 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 PRINTS PR00160 Glutaredoxin signature 164 177 3.0E-7 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 PRINTS PR00160 Glutaredoxin signature 115 133 3.0E-7 T 13-10-2018 IPR014025 Glutaredoxin subgroup VAA_01284 31fb737abcb566f1840e6d45bea18beb 196 Gene3D G3DSA:3.40.30.10 116 192 4.9E-19 T 13-10-2018 VAA_01267 12728ee08aa6daf4ded8a357374713ee 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 3.7E-28 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VAA_01267 12728ee08aa6daf4ded8a357374713ee 282 SUPERFAMILY SSF51182 7 280 1.27E-73 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_01267 12728ee08aa6daf4ded8a357374713ee 282 PIRSF PIRSF006232 3 282 2.3E-85 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VAA_01267 12728ee08aa6daf4ded8a357374713ee 282 Pfam PF02678 Pirin 26 121 4.9E-34 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VAA_01267 12728ee08aa6daf4ded8a357374713ee 282 Gene3D G3DSA:2.60.120.10 18 275 6.5E-84 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01267 12728ee08aa6daf4ded8a357374713ee 282 Gene3D G3DSA:2.60.120.10 143 249 6.5E-84 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_00388 0a38dd5825e087f6bc4116d3b6c0c96e 356 Gene3D G3DSA:3.30.160.690 92 181 1.0E-32 T 13-10-2018 VAA_00388 0a38dd5825e087f6bc4116d3b6c0c96e 356 Pfam PF15935 RNase LS, bacterial toxin 97 324 8.3E-87 T 13-10-2018 IPR031845 Bacterial toxin, RNase RnlA/LsoA VAA_00388 0a38dd5825e087f6bc4116d3b6c0c96e 356 Gene3D G3DSA:3.30.310.240 1 91 9.4E-32 T 13-10-2018 VAA_00388 0a38dd5825e087f6bc4116d3b6c0c96e 356 Gene3D G3DSA:1.10.8.1130 182 248 6.7E-31 T 13-10-2018 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Gene3D G3DSA:3.30.830.10 8 250 6.7E-56 T 13-10-2018 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 SUPERFAMILY SSF63411 20 250 5.41E-39 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Pfam PF05193 Peptidase M16 inactive domain 672 849 2.4E-10 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Pfam PF05193 Peptidase M16 inactive domain 201 377 5.7E-12 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Gene3D G3DSA:3.30.830.10 741 917 9.1E-14 T 13-10-2018 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Pfam PF00675 Insulinase (Peptidase family M16) 49 183 1.1E-21 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 SUPERFAMILY SSF63411 502 716 5.41E-24 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Gene3D G3DSA:3.30.830.10 509 717 1.3E-17 T 13-10-2018 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 Gene3D G3DSA:3.30.830.10 267 469 2.4E-9 T 13-10-2018 VAA_01003 b9b0eaf9b56945f129e52f83fe5fdc6a 920 SUPERFAMILY SSF63411 757 911 2.27E-12 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 3.4E-26 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 Pfam PF00825 Ribonuclease P 1 101 4.0E-30 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 SUPERFAMILY SSF54211 1 103 2.78E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.611 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 4.0E-42 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VAA_00841 a6e0c5f998a535c5083c1af6bef17f8b 107 Gene3D G3DSA:3.30.230.10 1 107 4.7E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VAA_03318 7807c32b70f3da76f7fb4cb9bd1611fc 435 Gene3D G3DSA:3.60.120.10 2 427 6.9E-131 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_03318 7807c32b70f3da76f7fb4cb9bd1611fc 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.842 T 13-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VAA_03318 7807c32b70f3da76f7fb4cb9bd1611fc 435 Pfam PF00425 chorismate binding enzyme 166 417 1.8E-73 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAA_03318 7807c32b70f3da76f7fb4cb9bd1611fc 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 1.2E-107 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VAA_03318 7807c32b70f3da76f7fb4cb9bd1611fc 435 SUPERFAMILY SSF56322 26 425 3.27E-101 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_02426 934b6d75ab23bc054c2f653d24b09cab 655 Gene3D G3DSA:1.10.3470.10 2 328 1.0E-58 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_02426 934b6d75ab23bc054c2f653d24b09cab 655 Gene3D G3DSA:1.10.3470.10 336 655 2.6E-70 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_02426 934b6d75ab23bc054c2f653d24b09cab 655 SUPERFAMILY SSF81345 7 323 2.62E-54 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_02426 934b6d75ab23bc054c2f653d24b09cab 655 Pfam PF01032 FecCD transport family 370 650 6.6E-67 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAA_02426 934b6d75ab23bc054c2f653d24b09cab 655 Pfam PF01032 FecCD transport family 13 323 2.3E-59 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAA_02426 934b6d75ab23bc054c2f653d24b09cab 655 SUPERFAMILY SSF81345 344 650 8.37E-62 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Gene3D G3DSA:1.20.1330.10 190 315 9.1E-10 T 13-10-2018 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 SUPERFAMILY SSF64518 1 377 2.88E-95 T 13-10-2018 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Pfam PF07196 Flagellin hook IN motif 194 246 6.7E-11 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Gene3D G3DSA:1.20.1330.10 45 176 2.5E-75 T 13-10-2018 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Gene3D G3DSA:1.20.58.1830 5 33 2.5E-75 T 13-10-2018 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 4.8E-23 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 PRINTS PR00207 Flagellin signature 37 54 2.0E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 PRINTS PR00207 Flagellin signature 111 134 2.0E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 PRINTS PR00207 Flagellin signature 76 95 2.0E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Gene3D G3DSA:1.10.8.410 325 377 3.8E-19 T 13-10-2018 VAA_03470 26aad75840c2a0fa8c12efeb410eb2b9 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.3E-43 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VAA_01385 eeb3727c73a91b7249af4a6639626429 123 Gene3D G3DSA:3.40.50.1980 23 122 2.9E-31 T 13-10-2018 VAA_01385 eeb3727c73a91b7249af4a6639626429 123 SUPERFAMILY SSF53807 26 117 2.67E-17 T 13-10-2018 VAA_01385 eeb3727c73a91b7249af4a6639626429 123 Pfam PF01497 Periplasmic binding protein 28 116 1.9E-12 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 11 472 7.5E-206 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 SUPERFAMILY SSF55681 102 470 8.62E-95 T 13-10-2018 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 226 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 403 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 427 441 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 230 243 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 12 472 45.919 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 SUPERFAMILY SSF50249 21 107 1.26E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 Pfam PF01336 OB-fold nucleic acid binding domain 26 105 7.0E-11 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 Gene3D G3DSA:3.30.930.10 115 471 1.0E-108 T 13-10-2018 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 466 8.9E-80 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VAA_01421 8cd5a0aeea420ab7b8c7c6189f51aed8 472 Gene3D G3DSA:2.40.50.140 2 112 1.2E-19 T 13-10-2018 VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 Gene3D G3DSA:1.10.10.10 53 192 1.9E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 SMART SM00347 79 179 2.1E-21 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 SUPERFAMILY SSF46785 59 195 7.81E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 Pfam PF01047 MarR family 86 144 8.9E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 135 2.2E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 PRINTS PR00598 Bacterial regulatory protein MarR family signature 139 155 2.2E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_01404 26a7334d1c8448ebe350c35fc1dd502b 213 PRINTS PR00598 Bacterial regulatory protein MarR family signature 169 189 2.2E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 SUPERFAMILY SSF56719 30 520 6.93E-187 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Gene3D G3DSA:3.90.199.10 33 520 2.3E-235 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.571 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.6E-157 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 812 6.5E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 8.6E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.31 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 5.8E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 8.1E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.5E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 5.7E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Gene3D G3DSA:3.30.1360.40 236 332 2.3E-235 T 13-10-2018 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Gene3D G3DSA:1.10.268.10 369 492 2.3E-235 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 SMART SM00434 11 498 7.8E-300 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VAA_01975 b554de6beaff61d48030680d74c0db5e 907 SUPERFAMILY SSF101904 532 873 7.98E-106 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAA_01975 b554de6beaff61d48030680d74c0db5e 907 Gene3D G3DSA:2.120.10.90 534 865 3.5E-123 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VAA_01975 b554de6beaff61d48030680d74c0db5e 907 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 709 0.0 T 13-10-2018 VAA_02524 7b0919336e9e591c8773a563c93b180e 438 SUPERFAMILY SSF56281 1 431 5.17E-120 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_02524 7b0919336e9e591c8773a563c93b180e 438 Pfam PF00753 Metallo-beta-lactamase superfamily 14 116 5.3E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_02524 7b0919336e9e591c8773a563c93b180e 438 Pfam PF10996 Beta-Casp domain 233 363 1.0E-24 T 13-10-2018 IPR022712 Beta-Casp domain VAA_02524 7b0919336e9e591c8773a563c93b180e 438 SMART SM01027 233 363 8.0E-53 T 13-10-2018 IPR022712 Beta-Casp domain VAA_02524 7b0919336e9e591c8773a563c93b180e 438 Gene3D G3DSA:3.40.50.10890 201 389 1.7E-128 T 13-10-2018 VAA_02524 7b0919336e9e591c8773a563c93b180e 438 SMART SM00849 13 208 1.5E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_02524 7b0919336e9e591c8773a563c93b180e 438 Gene3D G3DSA:3.60.15.10 6 424 1.7E-128 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_02524 7b0919336e9e591c8773a563c93b180e 438 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 436 3.0E-13 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VAA_03732 04f96d6cec48a07232ee6e844b9600da 160 SUPERFAMILY SSF101738 5 117 1.27E-48 T 13-10-2018 IPR036760 SspB-like superfamily VAA_03732 04f96d6cec48a07232ee6e844b9600da 160 PIRSF PIRSF005276 4 160 7.0E-61 T 13-10-2018 IPR007481 Stringent starvation protein B VAA_03732 04f96d6cec48a07232ee6e844b9600da 160 Gene3D G3DSA:2.30.30.220 4 137 4.2E-50 T 13-10-2018 IPR036760 SspB-like superfamily VAA_03732 04f96d6cec48a07232ee6e844b9600da 160 Pfam PF04386 Stringent starvation protein B 10 160 4.7E-40 T 13-10-2018 IPR007481 Stringent starvation protein B VAA_01529 0f745e4a35dc81c8e67c4210c987ff9d 162 Pfam PF01936 NYN domain 8 156 8.5E-40 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type VAA_01529 0f745e4a35dc81c8e67c4210c987ff9d 162 Gene3D G3DSA:3.40.50.1010 2 162 4.1E-58 T 13-10-2018 VAA_00659 c34e8914aaaf1f388f0b3c76ba7af65d 644 Pfam PF05170 AsmA family 1 543 3.4E-103 T 13-10-2018 IPR007844 AsmA VAA_03658 95be36d82c0b8c07ec28053f0dc7e3dc 382 SUPERFAMILY SSF55781 34 149 3.36E-12 T 13-10-2018 VAA_03658 95be36d82c0b8c07ec28053f0dc7e3dc 382 Gene3D G3DSA:1.10.3210.10 165 372 2.2E-45 T 13-10-2018 VAA_03658 95be36d82c0b8c07ec28053f0dc7e3dc 382 SUPERFAMILY SSF109604 188 358 5.97E-23 T 13-10-2018 VAA_03658 95be36d82c0b8c07ec28053f0dc7e3dc 382 Gene3D G3DSA:3.30.450.40 18 160 1.2E-10 T 13-10-2018 IPR029016 GAF-like domain superfamily VAA_03658 95be36d82c0b8c07ec28053f0dc7e3dc 382 Pfam PF13487 HD domain 243 313 2.2E-12 T 13-10-2018 VAA_03018 6a6fe94f110ad48f7c4f0dd0ddb2e23e 290 SUPERFAMILY SSF53098 112 274 1.64E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_03018 6a6fe94f110ad48f7c4f0dd0ddb2e23e 290 Gene3D G3DSA:3.30.420.10 109 283 1.6E-16 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03018 6a6fe94f110ad48f7c4f0dd0ddb2e23e 290 Pfam PF00665 Integrase core domain 119 234 5.3E-32 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_03018 6a6fe94f110ad48f7c4f0dd0ddb2e23e 290 Pfam PF13276 HTH-like domain 42 95 5.3E-8 T 13-10-2018 IPR025948 HTH-like domain VAA_00753 09df453649d399eb8b9bd19feee322bc 463 Pfam PF01743 Poly A polymerase head domain 62 191 3.8E-39 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 15 457 37.32 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 31 458 2.4E-158 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 218 279 3.8E-21 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 Gene3D G3DSA:1.10.3090.10 189 439 1.9E-91 T 13-10-2018 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 Gene3D G3DSA:3.30.460.10 28 187 5.8E-62 T 13-10-2018 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 Pfam PF12626 Polymerase A arginine-rich C-terminus 337 455 8.5E-38 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VAA_00753 09df453649d399eb8b9bd19feee322bc 463 SUPERFAMILY SSF81891 189 401 1.7E-48 T 13-10-2018 VAA_00753 09df453649d399eb8b9bd19feee322bc 463 SUPERFAMILY SSF81301 34 188 8.94E-41 T 13-10-2018 VAA_01358 f5ce49d0ec0d6d47fd45aaecad73b3f1 287 Gene3D G3DSA:3.60.15.10 19 256 5.8E-25 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01358 f5ce49d0ec0d6d47fd45aaecad73b3f1 287 SUPERFAMILY SSF56281 4 262 3.92E-42 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01358 f5ce49d0ec0d6d47fd45aaecad73b3f1 287 SMART SM00849 37 222 1.3E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01358 f5ce49d0ec0d6d47fd45aaecad73b3f1 287 Pfam PF00753 Metallo-beta-lactamase superfamily 37 222 1.2E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_03203 242673e91e37eb6dacf559d75aac6855 414 Pfam PF12704 MacB-like periplasmic core domain 29 241 1.7E-14 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VAA_03203 242673e91e37eb6dacf559d75aac6855 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 7.5E-204 T 13-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VAA_03203 242673e91e37eb6dacf559d75aac6855 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 8.7E-153 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VAA_03203 242673e91e37eb6dacf559d75aac6855 414 Pfam PF02687 FtsX-like permease family 301 407 3.1E-13 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_01943 c3fb5efe5969df202b73b82236af562e 172 SUPERFAMILY SSF141452 3 169 2.09E-38 T 13-10-2018 IPR036624 Hcp1-like superfamily VAA_01943 c3fb5efe5969df202b73b82236af562e 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.4E-63 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VAA_01943 c3fb5efe5969df202b73b82236af562e 172 Gene3D G3DSA:2.30.110.20 2 172 8.2E-66 T 13-10-2018 IPR036624 Hcp1-like superfamily VAA_01943 c3fb5efe5969df202b73b82236af562e 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 4.4E-32 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VAA_01120 72f0f353e2a9cb261933c14d03841251 150 SUPERFAMILY SSF51161 4 139 1.22E-31 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_01120 72f0f353e2a9cb261933c14d03841251 150 PIRSF PIRSF000441 1 147 1.7E-38 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VAA_01120 72f0f353e2a9cb261933c14d03841251 150 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 86 118 7.3E-8 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_01120 72f0f353e2a9cb261933c14d03841251 150 Gene3D G3DSA:2.160.10.10 37 146 1.1E-26 T 13-10-2018 VAA_03772 0980a3335be2f653c8f08282a6e9695d 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.1E-105 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAA_03772 0980a3335be2f653c8f08282a6e9695d 243 SUPERFAMILY SSF63892 4 242 3.27E-102 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAA_03772 0980a3335be2f653c8f08282a6e9695d 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.089 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAA_03772 0980a3335be2f653c8f08282a6e9695d 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.3E-100 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VAA_03772 0980a3335be2f653c8f08282a6e9695d 243 Gene3D G3DSA:3.20.20.70 1 243 1.0E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03481 3cf958b846aeed6d5ec659cae50a17de 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 34.091 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC VAA_03481 3cf958b846aeed6d5ec659cae50a17de 339 Pfam PF06804 NlpB/DapX lipoprotein 36 335 4.7E-104 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein VAA_03481 3cf958b846aeed6d5ec659cae50a17de 339 PIRSF PIRSF026343 4 339 2.1E-126 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC VAA_03481 3cf958b846aeed6d5ec659cae50a17de 339 Gene3D G3DSA:3.30.530.50 96 205 6.8E-15 T 13-10-2018 VAA_03481 3cf958b846aeed6d5ec659cae50a17de 339 Gene3D G3DSA:3.30.310.170 220 339 6.4E-40 T 13-10-2018 VAA_03022 ebba5331f509008286a4135d9d6272cd 1150 Pfam PF14331 ImcF-related N-terminal domain 167 419 2.0E-58 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain VAA_03022 ebba5331f509008286a4135d9d6272cd 1150 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1148 2.8E-175 T 13-10-2018 IPR017731 Type VI secretion system, IcmF VAA_03022 ebba5331f509008286a4135d9d6272cd 1150 Pfam PF06761 Intracellular multiplication and human macrophage-killing 474 768 1.2E-48 T 13-10-2018 IPR009612 ImcF-related VAA_03022 ebba5331f509008286a4135d9d6272cd 1150 Pfam PF06744 Type VI secretion protein IcmF C-terminal 899 1098 1.3E-44 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR01032 Gene IV protein signature 425 448 7.1E-9 T 13-10-2018 VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR01032 Gene IV protein signature 541 569 7.1E-9 T 13-10-2018 VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR01032 Gene IV protein signature 594 616 7.1E-9 T 13-10-2018 VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Gene3D G3DSA:3.30.1370.120 189 259 3.9E-20 T 13-10-2018 IPR038591 NolW-like superfamily VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 559 592 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Pfam PF03958 Bacterial type II/III secretion system short domain 267 345 3.4E-18 T 13-10-2018 IPR005644 NolW-like VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 2.2E-14 T 13-10-2018 IPR005644 NolW-like VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 9.4E-9 T 13-10-2018 IPR005644 NolW-like VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Gene3D G3DSA:3.30.1370.120 264 343 1.4E-17 T 13-10-2018 IPR038591 NolW-like superfamily VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Pfam PF00263 Bacterial type II and III secretion system protein 452 614 2.3E-51 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 493 7.1E-37 T 13-10-2018 IPR001775 GspD/PilQ family VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 355 7.1E-37 T 13-10-2018 IPR001775 GspD/PilQ family VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 448 472 7.1E-37 T 13-10-2018 IPR001775 GspD/PilQ family VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 578 596 7.1E-37 T 13-10-2018 IPR001775 GspD/PilQ family VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 601 615 7.1E-37 T 13-10-2018 IPR001775 GspD/PilQ family VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 623 6.7E-161 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VAA_00653 329d1e55f5bb7308aca581d9cca105b8 677 Gene3D G3DSA:3.30.1370.120 20 186 5.0E-54 T 13-10-2018 IPR038591 NolW-like superfamily VAA_02341 7b331d39ca8ca677a05e0c7e2de21992 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 1.4E-27 T 13-10-2018 IPR009749 Protein of unknown function DUF1315 VAA_03121 b847b9fa7b9fcb9c4165e05be300dae9 38 Gene3D G3DSA:2.30.130.30 1 28 2.5E-7 T 13-10-2018 VAA_02393 8d1cc02506f7b4d9aea5e0c166256870 395 Gene3D G3DSA:3.60.120.10 5 393 1.1E-113 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_02393 8d1cc02506f7b4d9aea5e0c166256870 395 SUPERFAMILY SSF56322 25 387 1.19E-85 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_02393 8d1cc02506f7b4d9aea5e0c166256870 395 Pfam PF00425 chorismate binding enzyme 123 377 3.0E-71 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAA_02393 8d1cc02506f7b4d9aea5e0c166256870 395 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 111 384 1.6E-80 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VAA_01707 d90884301ec3fddea637cd9c1822d939 614 SUPERFAMILY SSF56349 261 425 1.5E-8 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_01707 d90884301ec3fddea637cd9c1822d939 614 Gene3D G3DSA:1.10.443.10 247 474 8.2E-6 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 1.5E-41 T 13-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.2E-58 T 13-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.7E-39 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 Gene3D G3DSA:2.60.300.12 2 107 2.5E-39 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 SUPERFAMILY SSF89360 1 96 1.14E-34 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VAA_00517 58f5fc6c33db8cfa77130a78792fc607 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.8E-27 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VAA_03118 d923ed3a72f4a29f5b7c41f9f8681187 255 Gene3D G3DSA:3.30.460.10 5 115 5.8E-7 T 13-10-2018 VAA_03118 d923ed3a72f4a29f5b7c41f9f8681187 255 SUPERFAMILY SSF81301 13 80 4.73E-8 T 13-10-2018 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 134 306 1.1E-80 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 Gene3D G3DSA:3.30.1490.20 147 206 1.4E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 Hamap MF_00162 Glutathione synthetase [gshB]. 1 326 173.37 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 12 130 6.1E-47 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 Gene3D G3DSA:3.40.50.20 11 139 1.0E-51 T 13-10-2018 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 Gene3D G3DSA:3.30.470.20 207 310 2.1E-40 T 13-10-2018 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 TIGRFAM TIGR01380 glut_syn: glutathione synthase 12 321 4.1E-139 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 SUPERFAMILY SSF52440 12 132 2.88E-46 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VAA_01652 6f7760cb1871d01bd78d313b7026be61 327 SUPERFAMILY SSF56059 133 323 3.12E-59 T 13-10-2018 VAA_02997 d558a19339de9c12eea8e62a820cc6a5 253 SUPERFAMILY SSF56235 2 242 4.8E-33 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_02997 d558a19339de9c12eea8e62a820cc6a5 253 Pfam PF13230 Glutamine amidotransferases class-II 25 196 8.4E-22 T 13-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VAA_02997 d558a19339de9c12eea8e62a820cc6a5 253 Gene3D G3DSA:3.60.20.10 1 252 6.9E-86 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_04287 7b467ded53e3028460a26ccd010b4447 294 Pfam PF11060 Protein of unknown function (DUF2861) 26 289 1.4E-97 T 13-10-2018 IPR021290 Protein of unknown function DUF2861 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 664 686 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 SUPERFAMILY SSF55021 387 480 1.34E-21 T 13-10-2018 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Gene3D G3DSA:1.20.120.1320 45 146 6.9E-85 T 13-10-2018 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Pfam PF13840 ACT domain 398 460 1.9E-7 T 13-10-2018 IPR027795 CASTOR, ACT domain VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Gene3D G3DSA:3.40.50.720 471 815 1.9E-118 T 13-10-2018 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 SUPERFAMILY SSF53633 5 302 6.28E-76 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 SUPERFAMILY SSF51735 467 640 5.91E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 PIRSF PIRSF000727 5 821 0.0 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Pfam PF01842 ACT domain 328 384 3.1E-9 T 13-10-2018 IPR002912 ACT domain VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Gene3D G3DSA:3.40.1160.10 7 299 6.9E-85 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 SUPERFAMILY SSF55021 307 385 3.97E-22 T 13-10-2018 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Gene3D G3DSA:3.30.360.10 629 799 1.9E-118 T 13-10-2018 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 476 610 2.0E-26 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 7 464 1.3E-132 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Gene3D G3DSA:3.30.2130.10 306 468 2.2E-45 T 13-10-2018 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Pfam PF00742 Homoserine dehydrogenase 618 814 1.0E-46 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 Pfam PF00696 Amino acid kinase family 6 288 3.3E-50 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_03684 d5a5f5b90caa52de4f45c8eda04c2352 823 SUPERFAMILY SSF55347 618 801 3.92E-48 T 13-10-2018 VAA_02462 ce18667ad1acb022e7dd49c754b56057 261 SUPERFAMILY SSF53448 4 144 1.19E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02462 ce18667ad1acb022e7dd49c754b56057 261 Pfam PF00535 Glycosyl transferase family 2 10 127 1.0E-14 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_02462 ce18667ad1acb022e7dd49c754b56057 261 Gene3D G3DSA:3.90.550.10 2 176 6.7E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_00907 340a7d5f2c104dc5b3d63172616ec032 175 SUPERFAMILY SSF52374 6 175 5.63E-26 T 13-10-2018 VAA_00907 340a7d5f2c104dc5b3d63172616ec032 175 Pfam PF01467 Cytidylyltransferase-like 12 150 1.0E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VAA_00907 340a7d5f2c104dc5b3d63172616ec032 175 Gene3D G3DSA:3.40.50.620 6 175 2.6E-45 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02868 ffbc1116d0d73df26ba904055001c051 278 SUPERFAMILY SSF52768 45 251 4.08E-25 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VAA_02868 ffbc1116d0d73df26ba904055001c051 278 Pfam PF00491 Arginase family 61 263 1.3E-11 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_02868 ffbc1116d0d73df26ba904055001c051 278 Gene3D G3DSA:3.40.800.10 38 271 1.3E-15 T 13-10-2018 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.126 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 Pfam PF01479 S4 domain 97 143 4.3E-18 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.5E-84 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 Gene3D G3DSA:3.10.290.10 103 191 5.3E-36 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 SMART SM01390 3 95 1.0E-49 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 SMART SM00363 96 160 2.3E-19 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 Gene3D G3DSA:1.10.1050.10 1 102 1.3E-44 T 13-10-2018 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 SUPERFAMILY SSF55174 3 206 6.41E-72 T 13-10-2018 VAA_02694 c8acb1178e9cf68321a7d92fbcd2fd00 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VAA_00774 5080d084153a083686eb3b97b3eba1e2 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.8E-41 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VAA_00774 5080d084153a083686eb3b97b3eba1e2 291 SUPERFAMILY SSF53067 114 283 5.38E-44 T 13-10-2018 VAA_00774 5080d084153a083686eb3b97b3eba1e2 291 Gene3D G3DSA:3.30.420.40 4 114 1.1E-67 T 13-10-2018 VAA_00774 5080d084153a083686eb3b97b3eba1e2 291 SUPERFAMILY SSF53067 1 111 2.25E-25 T 13-10-2018 VAA_00774 5080d084153a083686eb3b97b3eba1e2 291 Gene3D G3DSA:3.30.420.40 115 261 1.1E-67 T 13-10-2018 VAA_02876 745fdbc34175f28f4d3a7e3325b6cb15 323 SUPERFAMILY SSF55909 20 314 2.75E-33 T 13-10-2018 VAA_02876 745fdbc34175f28f4d3a7e3325b6cb15 323 Pfam PF02274 Amidinotransferase 24 84 5.0E-6 T 13-10-2018 VAA_02876 745fdbc34175f28f4d3a7e3325b6cb15 323 Pfam PF02274 Amidinotransferase 86 319 2.6E-53 T 13-10-2018 VAA_02876 745fdbc34175f28f4d3a7e3325b6cb15 323 PIRSF PIRSF028188 3 322 2.8E-145 T 13-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VAA_02876 745fdbc34175f28f4d3a7e3325b6cb15 323 Gene3D G3DSA:3.75.10.10 18 314 8.1E-41 T 13-10-2018 VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 PIRSF PIRSF002155 1 227 1.0E-79 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.3E-107 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.514 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 SUPERFAMILY SSF56808 6 226 3.01E-82 T 13-10-2018 IPR023674 Ribosomal protein L1-like VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.9E-51 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 Gene3D G3DSA:3.30.190.20 21 225 2.6E-80 T 13-10-2018 VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 Gene3D G3DSA:3.40.50.790 68 159 2.6E-80 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VAA_00354 8c3b25a6f6193468208b94f0c4715471 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PIRSF PIRSF006356 1 407 9.8E-150 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 4.4E-160 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 Pfam PF02274 Amidinotransferase 18 404 2.1E-108 T 13-10-2018 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 43.368 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 Gene3D G3DSA:1.10.3930.10 68 148 7.5E-146 T 13-10-2018 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 8.0E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 8.0E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 8.0E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 8.0E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 8.0E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 8.0E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 Gene3D G3DSA:3.75.10.10 6 404 7.5E-146 T 13-10-2018 VAA_02563 ea6816cb9b0f6f8d28b68012413135d3 407 SUPERFAMILY SSF55909 3 407 3.53E-126 T 13-10-2018 VAA_02057 18256e8d0fd7937e3a3c900db73ac0d4 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.895 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VAA_02057 18256e8d0fd7937e3a3c900db73ac0d4 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 259 8.6E-44 T 13-10-2018 VAA_02057 18256e8d0fd7937e3a3c900db73ac0d4 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VAA_02057 18256e8d0fd7937e3a3c900db73ac0d4 298 SUPERFAMILY SSF51621 6 294 2.06E-96 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_02057 18256e8d0fd7937e3a3c900db73ac0d4 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 5.2E-127 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VAA_02057 18256e8d0fd7937e3a3c900db73ac0d4 298 Gene3D G3DSA:3.20.20.60 2 298 3.4E-99 T 13-10-2018 VAA_01111 1cd1e3a52cbb7f7c78f76d885e8b04a7 78 Gene3D G3DSA:3.10.560.10 16 25 3.3E-10 T 13-10-2018 VAA_01111 1cd1e3a52cbb7f7c78f76d885e8b04a7 78 Pfam PF02563 Polysaccharide biosynthesis/export protein 19 76 4.1E-17 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VAA_01111 1cd1e3a52cbb7f7c78f76d885e8b04a7 78 Gene3D G3DSA:3.30.1950.10 26 77 3.3E-10 T 13-10-2018 VAA_00660 b8ee49b5cb9dc010034d205f767faff7 144 SUPERFAMILY SSF69500 2 143 5.49E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VAA_00660 b8ee49b5cb9dc010034d205f767faff7 144 Gene3D G3DSA:3.50.80.10 1 144 5.5E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VAA_00660 b8ee49b5cb9dc010034d205f767faff7 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.2E-50 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VAA_00660 b8ee49b5cb9dc010034d205f767faff7 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.437 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VAA_00660 b8ee49b5cb9dc010034d205f767faff7 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 4.4E-62 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VAA_00228 acfb837c6ed057a82fdf4f45ee31f069 119 SUPERFAMILY SSF50044 74 117 2.31E-6 T 13-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 VAA_00228 acfb837c6ed057a82fdf4f45ee31f069 119 PIRSF PIRSF034961 7 119 6.7E-29 T 13-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 VAA_00228 acfb837c6ed057a82fdf4f45ee31f069 119 Pfam PF07653 Variant SH3 domain 9 63 3.6E-6 T 13-10-2018 IPR001452 SH3 domain GO:0005515 VAA_00228 acfb837c6ed057a82fdf4f45ee31f069 119 Gene3D G3DSA:2.30.30.40 71 119 3.3E-5 T 13-10-2018 VAA_00228 acfb837c6ed057a82fdf4f45ee31f069 119 SUPERFAMILY SSF50044 8 66 2.45E-7 T 13-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 SUPERFAMILY SSF102114 116 325 2.09E-12 T 13-10-2018 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 18 366 71.719 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 17 371 8.6E-159 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 PIRSF PIRSF006004 14 379 1.4E-143 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 Pfam PF04055 Radical SAM superfamily 122 293 1.3E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 Gene3D G3DSA:1.10.150.530 11 80 9.0E-25 T 13-10-2018 VAA_00510 66e692d6692140b606f953ac9d0085e9 386 Gene3D G3DSA:3.20.20.70 81 351 4.7E-112 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00260 6b848ce492164be5567eee969474e13a 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.2E-53 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00260 6b848ce492164be5567eee969474e13a 149 Gene3D G3DSA:3.40.5.10 1 50 1.0E-23 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00260 6b848ce492164be5567eee969474e13a 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VAA_00260 6b848ce492164be5567eee969474e13a 149 SUPERFAMILY SSF55653 60 149 9.81E-24 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VAA_00260 6b848ce492164be5567eee969474e13a 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 148 2.8E-23 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal VAA_00260 6b848ce492164be5567eee969474e13a 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00260 6b848ce492164be5567eee969474e13a 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.584 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00260 6b848ce492164be5567eee969474e13a 149 Gene3D G3DSA:3.10.430.100 61 149 8.2E-29 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VAA_00260 6b848ce492164be5567eee969474e13a 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.5E-21 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01616 d342a3470e8b1c97abaf355abf94c06e 205 SUPERFAMILY SSF103088 87 200 2.88E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_01616 d342a3470e8b1c97abaf355abf94c06e 205 Gene3D G3DSA:3.30.1330.60 66 204 1.3E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_01616 d342a3470e8b1c97abaf355abf94c06e 205 Pfam PF00691 OmpA family 100 194 4.8E-16 T 13-10-2018 IPR006665 OmpA-like domain VAA_01616 d342a3470e8b1c97abaf355abf94c06e 205 PRINTS PR01021 OMPA domain signature 130 145 2.7E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_01616 d342a3470e8b1c97abaf355abf94c06e 205 PRINTS PR01021 OMPA domain signature 145 161 2.7E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03647 1cb0610c8147c48ec5cdc2b0121019f2 184 SUPERFAMILY SSF110857 1 124 2.75E-17 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VAA_03647 1cb0610c8147c48ec5cdc2b0121019f2 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 109 9.5E-9 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VAA_03647 1cb0610c8147c48ec5cdc2b0121019f2 184 Gene3D G3DSA:3.10.490.10 1 130 4.0E-8 T 13-10-2018 VAA_03660 1289f6e1e24728cc42492d9c36cc3918 70 Pfam PF09905 DNA-binding protein VF530 5 66 3.3E-35 T 13-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VAA_03660 1289f6e1e24728cc42492d9c36cc3918 70 Gene3D G3DSA:1.10.720.30 12 70 4.3E-31 T 13-10-2018 IPR036361 SAP domain superfamily VAA_01268 d337fa2acdd8e2a4af0e0390b3c2d0b6 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 244 1.1E-22 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01268 d337fa2acdd8e2a4af0e0390b3c2d0b6 248 Gene3D G3DSA:3.40.190.10 35 242 1.7E-30 T 13-10-2018 VAA_01268 d337fa2acdd8e2a4af0e0390b3c2d0b6 248 Gene3D G3DSA:3.40.190.10 112 204 1.7E-30 T 13-10-2018 VAA_01268 d337fa2acdd8e2a4af0e0390b3c2d0b6 248 SMART SM00062 38 247 1.0E-8 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01268 d337fa2acdd8e2a4af0e0390b3c2d0b6 248 SUPERFAMILY SSF53850 33 244 5.82E-36 T 13-10-2018 VAA_00492 273af75054e103c333ef0f34ebfe5dbd 640 ProSitePatterns PS01303 BCCT family of transporters signature. 333 342 - T 13-10-2018 IPR018093 BCCT transporter, conserved site VAA_00492 273af75054e103c333ef0f34ebfe5dbd 640 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 25 514 2.5E-158 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAA_00492 273af75054e103c333ef0f34ebfe5dbd 640 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 62 514 4.9E-148 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAA_01432 7a22517befd8861eca20ef014b193bd4 459 Pfam PF04317 YcjX-like family, DUF463 20 458 2.4E-186 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VAA_01432 7a22517befd8861eca20ef014b193bd4 459 SUPERFAMILY SSF52540 21 354 5.87E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01432 7a22517befd8861eca20ef014b193bd4 459 PIRSF PIRSF019381 1 459 6.1E-198 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VAA_01936 84906cf90b0cec05404e0a5258001df0 553 SMART SM00283 291 552 1.6E-75 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 SUPERFAMILY SSF58104 244 553 1.26E-74 T 13-10-2018 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 Gene3D G3DSA:3.30.450.20 28 199 6.1E-32 T 13-10-2018 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 SMART SM00304 222 276 4.2E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 SMART SM01049 44 130 1.1E-14 T 13-10-2018 IPR033480 Single Cache domain 2 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 Gene3D G3DSA:1.10.287.950 221 553 5.1E-71 T 13-10-2018 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 Pfam PF17200 Single Cache domain 2 63 187 3.5E-29 T 13-10-2018 IPR033480 Single Cache domain 2 VAA_01936 84906cf90b0cec05404e0a5258001df0 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 516 3.6E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_00629 5379173bffe52208ccffdf8c55ada35f 310 SUPERFAMILY SSF46785 4 112 3.7E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00629 5379173bffe52208ccffdf8c55ada35f 310 Gene3D G3DSA:1.10.10.10 1 90 4.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00629 5379173bffe52208ccffdf8c55ada35f 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.5E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00629 5379173bffe52208ccffdf8c55ada35f 310 Gene3D G3DSA:3.40.190.290 91 293 1.5E-57 T 13-10-2018 VAA_00629 5379173bffe52208ccffdf8c55ada35f 310 SUPERFAMILY SSF53850 89 293 1.57E-41 T 13-10-2018 VAA_00629 5379173bffe52208ccffdf8c55ada35f 310 Pfam PF03466 LysR substrate binding domain 88 291 1.6E-40 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 2.4E-38 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 1.2E-29 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Pfam PF02080 TrkA-C domain 309 374 5.0E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Pfam PF02080 TrkA-C domain 230 281 7.9E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.836 T 13-10-2018 IPR023017 Transport protein YbjL, putative VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 SUPERFAMILY SSF116726 294 377 1.7E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 SUPERFAMILY SSF116726 230 285 2.49E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Gene3D G3DSA:3.30.70.1450 226 288 3.1E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Gene3D G3DSA:3.30.70.1450 294 372 1.1E-5 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 2.7E-43 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_02222 b5cc8d23ad7c3c4702544923a538a166 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.5E-36 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 SMART SM00495 323 372 1.9E-6 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 SMART SM00495 74 120 3.0E-8 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 SMART SM00636 568 870 1.4E-4 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 ProSitePatterns PS01095 Chitinases family 18 active site. 682 690 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 SUPERFAMILY SSF51445 566 878 1.76E-48 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Gene3D G3DSA:3.20.20.80 566 887 8.3E-78 T 13-10-2018 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Pfam PF00704 Glycosyl hydrolases family 18 570 870 4.3E-26 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Gene3D G3DSA:2.60.40.10 130 219 2.3E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Gene3D G3DSA:2.60.40.10 224 314 2.3E-26 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Gene3D G3DSA:2.60.40.10 381 473 1.3E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 SUPERFAMILY SSF51055 65 123 1.65E-11 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Gene3D G3DSA:2.60.40.10 475 565 7.5E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02321 5bf4fe14de45eac7b7ede34bc2dc890f 892 Gene3D G3DSA:2.10.10.20 71 123 2.9E-10 T 13-10-2018 VAA_00747 2bedd41668e110d19049f2b5988d3420 350 Gene3D G3DSA:3.40.50.300 38 282 9.9E-67 T 13-10-2018 VAA_00747 2bedd41668e110d19049f2b5988d3420 350 ProSitePatterns PS00211 ABC transporters family signature. 180 194 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00747 2bedd41668e110d19049f2b5988d3420 350 SMART SM00382 73 256 7.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00747 2bedd41668e110d19049f2b5988d3420 350 SUPERFAMILY SSF52540 43 276 7.64E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00747 2bedd41668e110d19049f2b5988d3420 350 Pfam PF00005 ABC transporter 64 208 1.0E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 Gene3D G3DSA:3.30.70.1150 80 157 3.9E-28 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.4E-62 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 Pfam PF13710 ACT domain 12 73 3.5E-16 T 13-10-2018 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 3.0E-35 T 13-10-2018 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.3E-25 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 SUPERFAMILY SSF55021 1 75 4.97E-22 T 13-10-2018 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 SUPERFAMILY SSF55021 79 162 6.99E-27 T 13-10-2018 VAA_03795 fe8d7a629b7b9be5211f639615faba87 164 Gene3D G3DSA:3.30.70.260 1 79 2.4E-32 T 13-10-2018 VAA_02818 637366fa6949f51b97d5a7addff0df1d 587 Pfam PF00916 Sulfate permease family 24 382 2.1E-79 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAA_02818 637366fa6949f51b97d5a7addff0df1d 587 SUPERFAMILY SSF52091 445 537 3.53E-10 T 13-10-2018 IPR036513 STAS domain superfamily VAA_02818 637366fa6949f51b97d5a7addff0df1d 587 Gene3D G3DSA:3.30.750.24 435 554 6.7E-19 T 13-10-2018 IPR036513 STAS domain superfamily VAA_02818 637366fa6949f51b97d5a7addff0df1d 587 Pfam PF01740 STAS domain 444 537 3.7E-13 T 13-10-2018 IPR002645 STAS domain VAA_01810 d43800165ebecfcae83015db4b55d88b 126 Pfam PF12290 Protein of unknown function (DUF3802) 15 122 3.0E-41 T 13-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 Gene3D G3DSA:3.40.30.10 96 257 6.1E-44 T 13-10-2018 VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 SUPERFAMILY SSF54423 41 94 4.71E-11 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 SUPERFAMILY SSF52833 113 255 4.5E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 Pfam PF13098 Thioredoxin-like domain 125 253 7.1E-27 T 13-10-2018 IPR012336 Thioredoxin-like fold VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 ProSitePatterns PS00194 Thioredoxin family active site. 132 150 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 Gene3D G3DSA:3.10.450.70 32 95 3.6E-13 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VAA_00737 e1e8cc89754b77567f3b61b6468ec5a7 257 Pfam PF10411 Disulfide bond isomerase protein N-terminus 44 93 4.4E-12 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VAA_00923 ee72faf7358834dca83b57f6ef29e4ce 156 Pfam PF14316 Domain of unknown function (DUF4381) 11 147 3.0E-35 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 VAA_03504 7b9e3f0cb665a228578f3628745711d7 210 Gene3D G3DSA:2.50.20.10 24 209 3.8E-52 T 13-10-2018 VAA_03504 7b9e3f0cb665a228578f3628745711d7 210 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 3 208 26.679 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VAA_03504 7b9e3f0cb665a228578f3628745711d7 210 SUPERFAMILY SSF89392 19 208 3.92E-47 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VAA_03504 7b9e3f0cb665a228578f3628745711d7 210 Pfam PF03550 Outer membrane lipoprotein LolB 46 206 4.2E-44 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VAA_03504 7b9e3f0cb665a228578f3628745711d7 210 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 207 2.3E-38 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VAA_02019 691063f87d6fd4a7ef00f091c7c384a1 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 13 83 2.6E-14 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAA_02019 691063f87d6fd4a7ef00f091c7c384a1 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 15 80 2.0E-10 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAA_00751 c7e10831fad976167c191e9c1cb81c1c 264 PIRSF PIRSF000388 1 264 5.6E-102 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAA_00751 c7e10831fad976167c191e9c1cb81c1c 264 Gene3D G3DSA:3.20.20.60 1 263 8.5E-106 T 13-10-2018 VAA_00751 c7e10831fad976167c191e9c1cb81c1c 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.312 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAA_00751 c7e10831fad976167c191e9c1cb81c1c 264 SUPERFAMILY SSF51621 3 262 2.56E-105 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VAA_00751 c7e10831fad976167c191e9c1cb81c1c 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 6.7E-115 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAA_00751 c7e10831fad976167c191e9c1cb81c1c 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 5.2E-108 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VAA_00792 7fe7f0acd6dd4b25736677827ce69ae0 288 SUPERFAMILY SSF161093 106 283 6.41E-45 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VAA_00792 7fe7f0acd6dd4b25736677827ce69ae0 288 Pfam PF01769 Divalent cation transporter 149 278 8.7E-28 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VAA_00792 7fe7f0acd6dd4b25736677827ce69ae0 288 Gene3D G3DSA:1.10.357.20 100 285 1.6E-52 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 SUPERFAMILY SSF49785 21 158 7.65E-30 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 Gene3D G3DSA:2.60.120.260 19 159 5.9E-32 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 Pfam PF02018 Carbohydrate binding domain 22 144 8.2E-15 T 13-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 Gene3D G3DSA:1.50.10.10 258 478 6.2E-68 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 SUPERFAMILY SSF81296 170 256 5.46E-13 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 Pfam PF00759 Glycosyl hydrolase family 9 260 474 1.2E-30 T 13-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 SUPERFAMILY SSF48208 257 476 1.02E-37 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 Pfam PF02927 Cellulase N-terminal ig-like domain 170 237 3.2E-12 T 13-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VAA_02387 5994f227bcc87a7ea3b5fb2a710f9f3f 485 Gene3D G3DSA:2.60.40.10 167 257 1.2E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03424 dd3982345cc235546a012921c5680f6f 177 PIRSF PIRSF038996 1 174 1.4E-66 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAA_03424 dd3982345cc235546a012921c5680f6f 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 1.2E-71 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VAA_03424 dd3982345cc235546a012921c5680f6f 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VAA_03424 dd3982345cc235546a012921c5680f6f 177 Gene3D G3DSA:3.40.50.360 3 176 3.0E-55 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_03424 dd3982345cc235546a012921c5680f6f 177 SUPERFAMILY SSF52218 4 172 4.66E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_03424 dd3982345cc235546a012921c5680f6f 177 Pfam PF00258 Flavodoxin 6 162 4.8E-32 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAA_02748 36c8567b8bf1f8c53598c7ceaa4fd533 283 SUPERFAMILY SSF52540 24 254 1.47E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02748 36c8567b8bf1f8c53598c7ceaa4fd533 283 Pfam PF00005 ABC transporter 41 188 6.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02748 36c8567b8bf1f8c53598c7ceaa4fd533 283 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02748 36c8567b8bf1f8c53598c7ceaa4fd533 283 SMART SM00382 49 246 1.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02748 36c8567b8bf1f8c53598c7ceaa4fd533 283 Gene3D G3DSA:3.40.50.300 22 271 2.2E-64 T 13-10-2018 VAA_03550 0f4c8da8e9fccbf8f73d58f1a34163c0 247 SMART SM00479 11 189 1.7E-50 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_03550 0f4c8da8e9fccbf8f73d58f1a34163c0 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 247 1.2E-101 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03550 0f4c8da8e9fccbf8f73d58f1a34163c0 247 Gene3D G3DSA:3.30.420.10 4 194 5.8E-59 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03550 0f4c8da8e9fccbf8f73d58f1a34163c0 247 Pfam PF00929 Exonuclease 13 180 1.1E-37 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_03550 0f4c8da8e9fccbf8f73d58f1a34163c0 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 230 2.8E-82 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VAA_03550 0f4c8da8e9fccbf8f73d58f1a34163c0 247 SUPERFAMILY SSF53098 8 190 5.81E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_03354 d18a8579b882e8f78ef74da427f08504 890 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 Gene3D G3DSA:3.40.309.10 218 405 4.8E-178 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 Gene3D G3DSA:3.40.605.10 12 446 4.8E-178 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 PIRSF PIRSF000111 1 865 0.0 T 13-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 1.3E-112 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 Pfam PF00171 Aldehyde dehydrogenase family 5 402 2.4E-24 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 SUPERFAMILY SSF53720 6 454 5.63E-83 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 SUPERFAMILY SSF56796 452 863 2.62E-115 T 13-10-2018 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 Gene3D G3DSA:3.40.50.1970 451 642 7.5E-58 T 13-10-2018 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 Gene3D G3DSA:1.20.1090.10 643 864 1.2E-60 T 13-10-2018 VAA_03354 d18a8579b882e8f78ef74da427f08504 890 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VAA_03367 9d580afbd062713fda7de734b0f0f523 110 PIRSF PIRSF005894 1 107 9.9E-51 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VAA_03367 9d580afbd062713fda7de734b0f0f523 110 Pfam PF00462 Glutaredoxin 16 80 2.7E-16 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAA_03367 9d580afbd062713fda7de734b0f0f523 110 SUPERFAMILY SSF52833 1 103 5.77E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03367 9d580afbd062713fda7de734b0f0f523 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 4.5E-45 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related VAA_03367 9d580afbd062713fda7de734b0f0f523 110 Gene3D G3DSA:3.40.30.10 2 106 2.6E-29 T 13-10-2018 VAA_00558 4c10d6d85fe19e57b1b11c0ef24fd8dc 320 Pfam PF06414 Zeta toxin 79 272 1.2E-33 T 13-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 VAA_00558 4c10d6d85fe19e57b1b11c0ef24fd8dc 320 Gene3D G3DSA:3.40.50.300 58 310 5.1E-45 T 13-10-2018 VAA_00558 4c10d6d85fe19e57b1b11c0ef24fd8dc 320 SUPERFAMILY SSF52540 85 228 1.54E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 2.4E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 1.4E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 323 8.2E-57 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 Gene3D G3DSA:1.10.760.10 211 297 1.9E-73 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 Gene3D G3DSA:1.20.58.1490 1 94 3.7E-34 T 13-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 2.4E-23 T 13-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 PIRSF PIRSF000006 1 324 6.2E-107 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 PRINTS PR00605 Class IC cytochrome C signature 295 317 5.8E-6 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 PRINTS PR00605 Class IC cytochrome C signature 166 177 5.8E-6 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 SUPERFAMILY SSF46626 243 322 1.4E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 SUPERFAMILY SSF46626 55 237 4.22E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_01847 4e1ae797941e10d985ef5c641d8d124f 325 Gene3D G3DSA:1.10.760.10 145 320 1.9E-73 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 SUPERFAMILY SSF53732 4 467 1.96E-166 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.6E-265 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 197 210 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 211 224 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 345 356 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 121 134 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 135 150 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 110 118 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 401 414 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 84 97 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 PRINTS PR00415 Aconitase family signature 288 302 1.2E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 Gene3D G3DSA:3.30.499.20 6 288 1.3E-99 T 13-10-2018 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 Gene3D G3DSA:3.30.499.10 325 473 8.8E-51 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 468 60.808 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VAA_03803 d21e4a4ba979eae45a912149add8b2c1 473 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 4.2E-161 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VAA_00799 87abc1e95736eb122d2e9c93eb50b209 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.1E-102 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VAA_00799 87abc1e95736eb122d2e9c93eb50b209 276 Pfam PF00809 Pterin binding enzyme 18 257 6.1E-90 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_00799 87abc1e95736eb122d2e9c93eb50b209 276 Gene3D G3DSA:3.20.20.20 2 276 8.2E-112 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_00799 87abc1e95736eb122d2e9c93eb50b209 276 SUPERFAMILY SSF51717 3 274 3.66E-106 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_00799 87abc1e95736eb122d2e9c93eb50b209 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_00799 87abc1e95736eb122d2e9c93eb50b209 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VAA_00156 a9963fbf816b053638c880dd828f4e64 215 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00156 a9963fbf816b053638c880dd828f4e64 215 SUPERFAMILY SSF52540 9 199 1.19E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00156 a9963fbf816b053638c880dd828f4e64 215 Pfam PF00005 ABC transporter 19 163 7.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00156 a9963fbf816b053638c880dd828f4e64 215 SMART SM00382 28 212 4.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00156 a9963fbf816b053638c880dd828f4e64 215 Gene3D G3DSA:3.40.50.300 1 208 3.3E-53 T 13-10-2018 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 7.6E-131 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 Gene3D G3DSA:1.10.8.1080 221 299 1.3E-30 T 13-10-2018 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 Gene3D G3DSA:3.40.50.10490 2 220 3.2E-80 T 13-10-2018 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 Pfam PF13580 SIS domain 39 167 6.8E-9 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 SUPERFAMILY SSF53697 7 251 6.67E-68 T 13-10-2018 VAA_02420 645adbe1271cc527867adf7b15459bb0 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.814 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAA_00934 32e5cf10c1be37a74a758159a552f780 119 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_00934 32e5cf10c1be37a74a758159a552f780 119 Gene3D G3DSA:1.10.3830.10 3 119 9.4E-40 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_00934 32e5cf10c1be37a74a758159a552f780 119 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 3.2E-35 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_01161 15517dc649373cf8574f760259d698f7 314 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 57 5.3E-18 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain VAA_01161 15517dc649373cf8574f760259d698f7 314 SUPERFAMILY SSF103088 182 299 4.84E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_01161 15517dc649373cf8574f760259d698f7 314 Gene3D G3DSA:3.30.1330.60 153 301 6.5E-50 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_01161 15517dc649373cf8574f760259d698f7 314 Pfam PF00691 OmpA family 195 293 2.9E-18 T 13-10-2018 IPR006665 OmpA-like domain VAA_03388 41da891709f872d2e122f1c3038b3f0c 130 SMART SM00448 9 123 1.8E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03388 41da891709f872d2e122f1c3038b3f0c 130 Pfam PF00072 Response regulator receiver domain 11 123 2.0E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03388 41da891709f872d2e122f1c3038b3f0c 130 SUPERFAMILY SSF52172 7 128 9.82E-37 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03388 41da891709f872d2e122f1c3038b3f0c 130 Gene3D G3DSA:3.40.50.2300 1 130 6.2E-40 T 13-10-2018 VAA_02648 e9bf86b3e657c92338cefb6647276765 352 SUPERFAMILY SSF55729 14 350 1.78E-129 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02648 e9bf86b3e657c92338cefb6647276765 352 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 16 351 5.8E-133 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VAA_02648 e9bf86b3e657c92338cefb6647276765 352 Pfam PF04958 Arginine N-succinyltransferase beta subunit 14 350 1.1E-139 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VAA_02648 e9bf86b3e657c92338cefb6647276765 352 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 16 351 6.2E-134 T 13-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VAA_02648 e9bf86b3e657c92338cefb6647276765 352 Gene3D G3DSA:3.40.630.30 13 287 9.6E-114 T 13-10-2018 VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 SUPERFAMILY SSF103473 14 452 1.29E-57 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 Gene3D G3DSA:1.20.1250.20 29 230 3.0E-34 T 13-10-2018 VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 Gene3D G3DSA:1.20.1250.20 246 459 8.6E-38 T 13-10-2018 VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 4.6E-135 T 13-10-2018 VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 Pfam PF07690 Major Facilitator Superfamily 35 396 1.7E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VAA_00940 08ace1cd3520125f6811d06689ced2a1 464 PIRSF PIRSF002808 10 460 1.9E-107 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAA_01273 70c3eaf2de92a122556a8b59524b4d9e 266 SUPERFAMILY SSF161098 60 246 7.46E-45 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01273 70c3eaf2de92a122556a8b59524b4d9e 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 259 7.3E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01273 70c3eaf2de92a122556a8b59524b4d9e 266 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 60 154 3.4E-25 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_01273 70c3eaf2de92a122556a8b59524b4d9e 266 Gene3D G3DSA:1.10.3720.10 50 261 2.5E-52 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01855 9b5ba89a6908597ee87c74c755273dda 164 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 16 149 7.0E-61 T 13-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VAA_01855 9b5ba89a6908597ee87c74c755273dda 164 Gene3D G3DSA:1.20.1270.380 16 104 2.0E-45 T 13-10-2018 IPR038339 MatP, N-terminal domain superfamily VAA_01855 9b5ba89a6908597ee87c74c755273dda 164 Gene3D G3DSA:1.10.1220.10 113 164 1.1E-22 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAA_01855 9b5ba89a6908597ee87c74c755273dda 164 Pfam PF06303 MatP N-terminal domain 17 100 7.5E-40 T 13-10-2018 IPR035087 MatP, N-terminal VAA_01855 9b5ba89a6908597ee87c74c755273dda 164 Hamap MF_01073 Macrodomain Ter protein [matP]. 16 163 28.632 T 13-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VAA_01855 9b5ba89a6908597ee87c74c755273dda 164 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 103 162 7.2E-27 T 13-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VAA_02611 d539b3582565b78756d4abd41a4ef3e2 144 Pfam PF00581 Rhodanese-like domain 47 135 5.8E-18 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_02611 d539b3582565b78756d4abd41a4ef3e2 144 SUPERFAMILY SSF52821 16 142 5.5E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_02611 d539b3582565b78756d4abd41a4ef3e2 144 Gene3D G3DSA:3.40.250.10 22 143 6.8E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_02611 d539b3582565b78756d4abd41a4ef3e2 144 SMART SM00450 40 138 1.6E-20 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01812 ebacc7b7151f24ea2428a65e8d29cb49 691 Gene3D G3DSA:1.10.287.950 365 690 1.1E-57 T 13-10-2018 VAA_01812 ebacc7b7151f24ea2428a65e8d29cb49 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 655 1.8E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01812 ebacc7b7151f24ea2428a65e8d29cb49 691 SMART SM00283 414 689 6.3E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01812 ebacc7b7151f24ea2428a65e8d29cb49 691 SUPERFAMILY SSF58104 381 689 1.07E-59 T 13-10-2018 VAA_02472 30c0dfe060c3d1f23b029b06c9e72e57 354 Gene3D G3DSA:3.40.50.2000 174 353 3.4E-58 T 13-10-2018 VAA_02472 30c0dfe060c3d1f23b029b06c9e72e57 354 Gene3D G3DSA:3.40.50.2000 13 161 9.9E-53 T 13-10-2018 VAA_02472 30c0dfe060c3d1f23b029b06c9e72e57 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 333 8.5E-72 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VAA_02472 30c0dfe060c3d1f23b029b06c9e72e57 354 SUPERFAMILY SSF53756 13 353 3.45E-99 T 13-10-2018 VAA_02472 30c0dfe060c3d1f23b029b06c9e72e57 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 14 352 2.1E-145 T 13-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 223 1.1E-47 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 Gene3D G3DSA:3.10.290.10 1 61 5.4E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 Pfam PF00849 RNA pseudouridylate synthase 61 191 8.3E-17 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 SUPERFAMILY SSF55174 1 80 7.51E-14 T 13-10-2018 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 Gene3D G3DSA:3.30.70.1560 127 208 1.7E-57 T 13-10-2018 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 SUPERFAMILY SSF55120 60 226 5.12E-46 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 Gene3D G3DSA:3.30.70.580 62 226 1.7E-57 T 13-10-2018 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 SMART SM00363 1 59 1.0E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VAA_01999 77f88d93f1c161846cc3c919f23875b5 231 Pfam PF01479 S4 domain 1 42 9.8E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02171 9a90f02619b6ec7236153583650057d6 380 Gene3D G3DSA:3.40.50.2300 206 368 9.3E-91 T 13-10-2018 VAA_02171 9a90f02619b6ec7236153583650057d6 380 SMART SM00354 46 116 1.9E-37 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_02171 9a90f02619b6ec7236153583650057d6 380 Gene3D G3DSA:3.40.50.2300 114 367 9.3E-91 T 13-10-2018 VAA_02171 9a90f02619b6ec7236153583650057d6 380 SUPERFAMILY SSF47413 46 104 1.35E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_02171 9a90f02619b6ec7236153583650057d6 380 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 48 58 2.5E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_02171 9a90f02619b6ec7236153583650057d6 380 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 58 68 2.5E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_02171 9a90f02619b6ec7236153583650057d6 380 SUPERFAMILY SSF53822 105 377 2.55E-94 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_02171 9a90f02619b6ec7236153583650057d6 380 Pfam PF13377 Periplasmic binding protein-like domain 215 375 2.4E-43 T 13-10-2018 VAA_02171 9a90f02619b6ec7236153583650057d6 380 ProSitePatterns PS00356 LacI-type HTH domain signature. 49 67 - T 13-10-2018 VAA_02171 9a90f02619b6ec7236153583650057d6 380 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 46 379 63.809 T 13-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VAA_02171 9a90f02619b6ec7236153583650057d6 380 Gene3D G3DSA:1.10.260.40 48 104 1.7E-24 T 13-10-2018 VAA_02171 9a90f02619b6ec7236153583650057d6 380 Pfam PF00356 Bacterial regulatory proteins, lacI family 48 93 1.0E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VAA_01397 8a208e6c333c25127e92f2a3cd55f798 345 Pfam PF09375 Imelysin 44 323 6.4E-36 T 13-10-2018 IPR018976 Imelysin-like domain VAA_01397 8a208e6c333c25127e92f2a3cd55f798 345 Gene3D G3DSA:1.20.1420.20 26 345 2.1E-64 T 13-10-2018 IPR038352 Imelysin-like domain superfamily VAA_02981 c360b8f7e757c7fcc0411d07eda48b7f 464 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 422 5.0E-57 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02981 c360b8f7e757c7fcc0411d07eda48b7f 464 PIRSF PIRSF006603 3 461 2.0E-68 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02981 c360b8f7e757c7fcc0411d07eda48b7f 464 Pfam PF01554 MatE 260 412 1.6E-17 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02981 c360b8f7e757c7fcc0411d07eda48b7f 464 Pfam PF01554 MatE 23 182 1.4E-31 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 Gene3D G3DSA:3.40.50.300 4 454 5.1E-186 T 13-10-2018 VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 SUPERFAMILY SSF52540 4 580 1.66E-211 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 Pfam PF01268 Formate--tetrahydrofolate ligase 4 581 1.7E-237 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 41.776 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 Gene3D G3DSA:3.30.1510.10 129 264 5.1E-186 T 13-10-2018 VAA_01629 cf660cd8f13c01a9c5e064df2a04d828 582 Gene3D G3DSA:3.10.410.10 469 558 4.5E-33 T 13-10-2018 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 SUPERFAMILY SSF55068 23 203 3.53E-70 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 236 369 4.0E-59 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 Gene3D G3DSA:2.170.150.20 231 377 5.7E-57 T 13-10-2018 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 38 197 35.13 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 Pfam PF01641 SelR domain 242 360 1.2E-45 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 SUPERFAMILY SSF51316 236 376 8.89E-58 T 13-10-2018 IPR011057 Mss4-like superfamily VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 235 361 34.897 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 40 190 1.3E-50 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 Gene3D G3DSA:3.30.1060.10 23 208 1.0E-62 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_01628 4e6c71aec205a539e135415c9ec3c350 377 Pfam PF01625 Peptide methionine sulfoxide reductase 41 191 1.3E-56 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VAA_02288 9497b1096084d860d3ee507537cca68f 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 Pfam PF00216 Bacterial DNA-binding protein 5 95 5.4E-29 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 5 96 5.5E-48 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VAA_02288 9497b1096084d860d3ee507537cca68f 98 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 5 98 30.317 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VAA_02288 9497b1096084d860d3ee507537cca68f 98 SUPERFAMILY SSF47729 5 95 5.15E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 SMART SM00411 5 95 5.0E-40 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 Gene3D G3DSA:4.10.520.10 44 95 4.9E-27 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_02288 9497b1096084d860d3ee507537cca68f 98 Gene3D G3DSA:4.10.520.10 5 43 5.7E-11 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 Gene3D G3DSA:1.10.287.480 178 224 1.0E-21 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 Pfam PF01430 Hsp33 protein 6 271 2.2E-79 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 PIRSF PIRSF005261 1 284 2.8E-70 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 SUPERFAMILY SSF64397 4 231 1.7E-75 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 Gene3D G3DSA:3.90.1280.10 225 284 4.2E-20 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.241 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 SUPERFAMILY SSF118352 223 281 3.92E-18 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VAA_00656 c8f9ba32ac3d24b16ed109c8e9d65cde 291 Gene3D G3DSA:3.55.30.10 1 175 1.3E-61 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 SUPERFAMILY SSF55816 368 545 9.55E-52 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 Gene3D G3DSA:3.90.780.10 368 554 4.1E-58 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 Pfam PF02872 5'-nucleotidase, C-terminal domain 368 514 2.0E-33 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 ProSitePatterns PS00785 5'-nucleotidase signature 1. 40 52 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 Gene3D G3DSA:3.60.21.10 32 367 2.0E-125 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 PRINTS PR01607 Apyrase family signature 38 56 1.4E-51 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 PRINTS PR01607 Apyrase family signature 213 230 1.4E-51 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 PRINTS PR01607 Apyrase family signature 489 508 1.4E-51 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 PRINTS PR01607 Apyrase family signature 244 267 1.4E-51 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 PRINTS PR01607 Apyrase family signature 422 445 1.4E-51 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 PRINTS PR01607 Apyrase family signature 289 309 1.4E-51 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 Pfam PF00149 Calcineurin-like phosphoesterase 40 261 1.8E-21 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_03497 f0a021332c443c598ac08001f6d2b2e4 555 SUPERFAMILY SSF56300 34 366 2.4E-96 T 13-10-2018 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 SUPERFAMILY SSF69336 1242 1505 6.15E-94 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Pfam PF04898 Glutamate synthase central domain 479 763 2.7E-114 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Gene3D G3DSA:3.60.20.10 28 567 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 SUPERFAMILY SSF51395 461 1228 6.51E-266 T 13-10-2018 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 SUPERFAMILY SSF56235 28 454 2.74E-151 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Pfam PF00310 Glutamine amidotransferases class-II 28 450 1.4E-184 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Gene3D G3DSA:2.160.20.60 1246 1517 1.3E-107 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Pfam PF01645 Conserved region in glutamate synthase 824 1194 1.0E-150 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Gene3D G3DSA:3.20.20.70 455 822 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Pfam PF01493 GXGXG motif 1274 1458 3.3E-82 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VAA_03691 e5927d97498c8ce15bb2a611dbfeef00 1522 Gene3D G3DSA:3.20.20.70 505 1211 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 SUPERFAMILY SSF51556 62 355 5.24E-101 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 SUPERFAMILY SSF51338 9 61 6.31E-18 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 Gene3D G3DSA:2.30.40.10 14 381 4.3E-142 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 Gene3D G3DSA:3.20.20.140 63 349 4.3E-142 T 13-10-2018 VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 PIRSF PIRSF038994 7 386 2.8E-119 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 Pfam PF01979 Amidohydrolase family 59 382 3.8E-36 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VAA_02102 bd75d3542243d2b9cc909995492d90c6 386 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 9 382 7.7E-154 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 SMART SM00028 178 211 26.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 SMART SM00028 214 247 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 SUPERFAMILY SSF48452 140 254 2.4E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 Pfam PF13432 Tetratricopeptide repeat 152 205 7.9E-7 T 13-10-2018 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 Gene3D G3DSA:1.25.40.10 140 258 9.6E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 Pfam PF16331 TolA binding protein trimerisation 47 120 4.3E-23 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 141 257 6.6E-37 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 Pfam PF13174 Tetratricopeptide repeat 215 247 3.4E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 Gene3D G3DSA:1.20.5.110 44 123 1.3E-20 T 13-10-2018 VAA_03151 1d18015e7ac090b67423414f138ebcfc 258 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 258 17.151 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VAA_00765 cab69199d4d0a7fe48ef865edf2d4b4c 128 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 8.9E-40 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAA_00765 cab69199d4d0a7fe48ef865edf2d4b4c 128 PIRSF PIRSF006287 1 123 4.9E-42 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAA_00765 cab69199d4d0a7fe48ef865edf2d4b4c 128 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 3.0E-35 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VAA_00446 5cab40586e8d88045b0fd4b050f3db80 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 1.1E-17 T 13-10-2018 IPR009525 Protein of unknown function DUF1145 VAA_02447 2e28360613c6e1658b1c9a15ef72eb29 401 SUPERFAMILY SSF56349 95 390 1.15E-54 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_02447 2e28360613c6e1658b1c9a15ef72eb29 401 Gene3D G3DSA:3.30.160.390 3 88 3.0E-19 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VAA_02447 2e28360613c6e1658b1c9a15ef72eb29 401 Gene3D G3DSA:1.10.150.130 91 198 1.6E-32 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_02447 2e28360613c6e1658b1c9a15ef72eb29 401 Pfam PF00589 Phage integrase family 202 380 8.4E-18 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_02447 2e28360613c6e1658b1c9a15ef72eb29 401 Gene3D G3DSA:1.10.443.10 199 398 1.7E-21 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_02447 2e28360613c6e1658b1c9a15ef72eb29 401 Pfam PF13356 Arm DNA-binding domain 4 87 2.9E-16 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VAA_00097 cb3edfbf34834f901d82b65a60f0c3bc 323 SUPERFAMILY SSF110849 74 150 9.42E-10 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VAA_00097 cb3edfbf34834f901d82b65a60f0c3bc 323 Pfam PF02195 ParB-like nuclease domain 73 146 9.7E-9 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VAA_00097 cb3edfbf34834f901d82b65a60f0c3bc 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 228 7.9E-23 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VAA_00097 cb3edfbf34834f901d82b65a60f0c3bc 323 Gene3D G3DSA:1.10.10.2830 153 272 7.6E-16 T 13-10-2018 VAA_00097 cb3edfbf34834f901d82b65a60f0c3bc 323 SMART SM00470 53 149 1.4E-9 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VAA_00896 4ff34a99bba20e0d3a2e9222378bae64 368 Gene3D G3DSA:1.10.3720.10 142 330 1.7E-36 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00896 4ff34a99bba20e0d3a2e9222378bae64 368 SUPERFAMILY SSF161098 144 327 5.63E-42 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00896 4ff34a99bba20e0d3a2e9222378bae64 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 165 329 9.4E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_03586 e7bcc3c5ab8838a69025fe86e6091dde 189 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 46 184 9.4E-56 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03586 e7bcc3c5ab8838a69025fe86e6091dde 189 Gene3D G3DSA:3.40.50.960 34 189 2.0E-62 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03586 e7bcc3c5ab8838a69025fe86e6091dde 189 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 41 187 30.82 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03586 e7bcc3c5ab8838a69025fe86e6091dde 189 SUPERFAMILY SSF52121 37 187 3.79E-59 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_03586 e7bcc3c5ab8838a69025fe86e6091dde 189 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 47 183 5.5E-54 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VAA_01732 b8e78bb28bc634356d5bbe4b2349a73b 290 SUPERFAMILY SSF52540 15 269 4.79E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01732 b8e78bb28bc634356d5bbe4b2349a73b 290 Pfam PF13401 AAA domain 51 177 1.1E-23 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01732 b8e78bb28bc634356d5bbe4b2349a73b 290 Gene3D G3DSA:3.40.50.300 38 192 1.4E-13 T 13-10-2018 VAA_01860 f95c7f2023425c65607608435225f72e 638 SUPERFAMILY SSF52540 5 239 5.7E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01860 f95c7f2023425c65607608435225f72e 638 SUPERFAMILY SSF52540 311 524 1.43E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01860 f95c7f2023425c65607608435225f72e 638 Gene3D G3DSA:3.40.50.300 281 551 8.4E-67 T 13-10-2018 VAA_01860 f95c7f2023425c65607608435225f72e 638 Gene3D G3DSA:3.40.50.300 7 279 1.5E-65 T 13-10-2018 VAA_01860 f95c7f2023425c65607608435225f72e 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01860 f95c7f2023425c65607608435225f72e 638 Gene3D G3DSA:1.10.287.380 554 637 3.0E-25 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VAA_01860 f95c7f2023425c65607608435225f72e 638 Pfam PF16326 ABC transporter C-terminal domain 564 632 5.2E-17 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VAA_01860 f95c7f2023425c65607608435225f72e 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01860 f95c7f2023425c65607608435225f72e 638 Pfam PF00005 ABC transporter 336 469 2.5E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_01860 f95c7f2023425c65607608435225f72e 638 Pfam PF12848 ABC transporter 224 296 2.8E-11 T 13-10-2018 IPR032781 ABC-transporter extension domain VAA_01860 f95c7f2023425c65607608435225f72e 638 SMART SM00382 344 514 2.7E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01860 f95c7f2023425c65607608435225f72e 638 SMART SM00382 28 230 3.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01860 f95c7f2023425c65607608435225f72e 638 Pfam PF00005 ABC transporter 19 185 4.9E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03733 e28b7f78c623514a16fe6ff627c72a22 226 SUPERFAMILY SSF47616 97 223 1.05E-22 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VAA_03733 e28b7f78c623514a16fe6ff627c72a22 226 Pfam PF13417 Glutathione S-transferase, N-terminal domain 28 102 4.9E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VAA_03733 e28b7f78c623514a16fe6ff627c72a22 226 Gene3D G3DSA:1.20.1050.10 104 208 2.8E-77 T 13-10-2018 VAA_03733 e28b7f78c623514a16fe6ff627c72a22 226 SUPERFAMILY SSF52833 26 125 3.65E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03733 e28b7f78c623514a16fe6ff627c72a22 226 Gene3D G3DSA:3.40.30.10 26 217 2.8E-77 T 13-10-2018 VAA_03733 e28b7f78c623514a16fe6ff627c72a22 226 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 209 1.1E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VAA_01634 494e0221f575d21285be7a711fafb524 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 6.3E-88 T 13-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 Gene3D G3DSA:3.40.50.1000 5 218 2.5E-63 T 13-10-2018 IPR023214 HAD superfamily VAA_01634 494e0221f575d21285be7a711fafb524 224 Gene3D G3DSA:1.10.150.240 16 95 2.5E-63 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VAA_01634 494e0221f575d21285be7a711fafb524 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 3.4E-16 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 195 2.7E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 SUPERFAMILY SSF56784 2 222 1.57E-49 T 13-10-2018 IPR036412 HAD-like superfamily VAA_01634 494e0221f575d21285be7a711fafb524 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.6E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.6E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.6E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.6E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VAA_01634 494e0221f575d21285be7a711fafb524 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 5.2E-24 T 13-10-2018 VAA_01508 e346cc685f2395a93149e7380da038e3 251 Pfam PF03746 LamB/YcsF family 10 248 3.6E-95 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VAA_01508 e346cc685f2395a93149e7380da038e3 251 SUPERFAMILY SSF88713 9 249 4.08E-93 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VAA_01508 e346cc685f2395a93149e7380da038e3 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 8 251 41.969 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VAA_01508 e346cc685f2395a93149e7380da038e3 251 Gene3D G3DSA:3.20.20.370 8 251 3.1E-98 T 13-10-2018 VAA_00948 d37693ab1ef312a4b2e033356a5c4a56 410 SUPERFAMILY SSF103473 12 401 5.23E-31 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_00948 d37693ab1ef312a4b2e033356a5c4a56 410 Gene3D G3DSA:1.20.1250.20 209 405 3.4E-12 T 13-10-2018 VAA_00948 d37693ab1ef312a4b2e033356a5c4a56 410 Pfam PF07690 Major Facilitator Superfamily 21 342 1.4E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_00948 d37693ab1ef312a4b2e033356a5c4a56 410 Gene3D G3DSA:1.20.1250.20 8 204 3.1E-12 T 13-10-2018 VAA_03182 b27f9ff8af3be08929462463b55c02d5 256 SMART SM00382 31 229 2.2E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03182 b27f9ff8af3be08929462463b55c02d5 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_03182 b27f9ff8af3be08929462463b55c02d5 256 Gene3D G3DSA:3.40.50.300 4 255 2.3E-73 T 13-10-2018 VAA_03182 b27f9ff8af3be08929462463b55c02d5 256 Pfam PF00005 ABC transporter 22 181 6.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03182 b27f9ff8af3be08929462463b55c02d5 256 SUPERFAMILY SSF52540 7 251 5.32E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03182 b27f9ff8af3be08929462463b55c02d5 256 PIRSF PIRSF039085 3 256 8.6E-118 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VAA_01199 96d052f9e88c4143c3658549a1d78077 294 SUPERFAMILY SSF111331 8 290 7.85E-92 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VAA_01199 96d052f9e88c4143c3658549a1d78077 294 Pfam PF01513 ATP-NAD kinase 8 273 8.4E-70 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VAA_01199 96d052f9e88c4143c3658549a1d78077 294 Gene3D G3DSA:3.40.50.10330 23 289 1.5E-90 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VAA_01199 96d052f9e88c4143c3658549a1d78077 294 Gene3D G3DSA:2.60.200.30 129 266 1.5E-90 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VAA_01199 96d052f9e88c4143c3658549a1d78077 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.67 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VAA_00242 0ef318c8667ea3a73f5dc6f56154e13b 369 Pfam PF05791 Bacillus haemolytic enterotoxin (HBL) 47 187 1.0E-9 T 13-10-2018 IPR008414 Hemolysin BL-binding component GO:0009405|GO:0016020 VAA_00242 0ef318c8667ea3a73f5dc6f56154e13b 369 SUPERFAMILY SSF58100 43 350 4.71E-30 T 13-10-2018 VAA_00242 0ef318c8667ea3a73f5dc6f56154e13b 369 Gene3D G3DSA:1.20.1170.10 13 358 7.2E-19 T 13-10-2018 VAA_00779 83e11f10ee4687b0e97971709589ecb0 328 Gene3D G3DSA:1.10.3720.10 88 327 4.3E-19 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00779 83e11f10ee4687b0e97971709589ecb0 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 1.1E-40 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00779 83e11f10ee4687b0e97971709589ecb0 328 SUPERFAMILY SSF161098 93 324 3.53E-16 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 SMART SM00528 101 148 8.8E-23 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 PIRSF PIRSF002096 12 148 1.9E-52 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 Pfam PF00816 H-NS histone family 49 142 2.5E-18 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 SUPERFAMILY SSF81273 106 148 7.45E-12 T 13-10-2018 VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 SUPERFAMILY SSF81273 13 69 2.16E-16 T 13-10-2018 VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 Gene3D G3DSA:1.10.287.1050 9 94 6.4E-30 T 13-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VAA_02203 53e3e545babb5f29bcbed778a2fdcaa1 148 Gene3D G3DSA:4.10.430.10 105 148 5.6E-24 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VAA_03224 98259d4e7ab0f68ca57835413b9a691d 529 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 1.1E-302 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VAA_03224 98259d4e7ab0f68ca57835413b9a691d 529 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 529 376.905 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VAA_03224 98259d4e7ab0f68ca57835413b9a691d 529 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 5.1E-296 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VAA_03784 af73b9546c089c6fc3f3570e72a7d1e7 86 Gene3D G3DSA:1.10.150.250 1 86 2.4E-36 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VAA_03784 af73b9546c089c6fc3f3570e72a7d1e7 86 SUPERFAMILY SSF109910 2 79 2.75E-25 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VAA_03784 af73b9546c089c6fc3f3570e72a7d1e7 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.2E-23 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Gene3D G3DSA:3.10.50.40 281 383 9.7E-74 T 13-10-2018 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Gene3D G3DSA:3.10.50.40 177 384 9.7E-74 T 13-10-2018 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 SUPERFAMILY SSF54534 281 383 7.2E-29 T 13-10-2018 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Pfam PF13616 PPIC-type PPIASE domain 166 272 6.4E-22 T 13-10-2018 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 SUPERFAMILY SSF54534 175 273 8.5E-25 T 13-10-2018 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Gene3D G3DSA:1.10.4030.10 24 150 3.6E-33 T 13-10-2018 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Hamap MF_01183 Chaperone SurA [surA]. 11 426 31.66 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Pfam PF09312 SurA N-terminal domain 27 144 5.1E-41 T 13-10-2018 IPR015391 SurA N-terminal VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 SUPERFAMILY SSF109998 27 199 1.31E-34 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily VAA_01672 3d50839d3624adfafd133c0fb37aafb4 431 Pfam PF00639 PPIC-type PPIASE domain 287 378 1.8E-21 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 VAA_01535 7872c7e28fb96122bb2daa493c045746 408 SUPERFAMILY SSF46548 13 91 1.64E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_01535 7872c7e28fb96122bb2daa493c045746 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_01535 7872c7e28fb96122bb2daa493c045746 408 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 407 2.3E-221 T 13-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 VAA_01535 7872c7e28fb96122bb2daa493c045746 408 Pfam PF02754 Cysteine-rich domain 175 261 2.8E-13 T 13-10-2018 IPR004017 Cysteine-rich domain VAA_01535 7872c7e28fb96122bb2daa493c045746 408 Pfam PF02754 Cysteine-rich domain 305 388 9.4E-12 T 13-10-2018 IPR004017 Cysteine-rich domain VAA_01535 7872c7e28fb96122bb2daa493c045746 408 Pfam PF13183 4Fe-4S dicluster domain 15 79 3.8E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_01535 7872c7e28fb96122bb2daa493c045746 408 Gene3D G3DSA:1.10.1060.10 3 97 8.9E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 Gene3D G3DSA:3.10.580.10 197 321 1.1E-43 T 13-10-2018 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 Pfam PF00571 CBS domain 211 259 8.0E-6 T 13-10-2018 IPR000644 CBS domain VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 Pfam PF00571 CBS domain 269 321 1.8E-5 T 13-10-2018 IPR000644 CBS domain VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 PIRSF PIRSF004692 1 324 9.4E-129 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 Pfam PF01380 SIS domain 44 173 1.1E-31 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 SUPERFAMILY SSF53697 8 319 1.76E-68 T 13-10-2018 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 Gene3D G3DSA:3.40.50.10490 4 196 2.2E-64 T 13-10-2018 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 2.1E-111 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 SMART SM00116 276 323 5.7 T 13-10-2018 IPR000644 CBS domain VAA_02744 39c9031b341b8b0f10198f6daa48e854 324 SMART SM00116 211 259 0.0011 T 13-10-2018 IPR000644 CBS domain VAA_01399 e7c56e373a190c686d63b9c6592f2b80 517 SUPERFAMILY SSF141523 288 450 6.67E-18 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAA_01399 e7c56e373a190c686d63b9c6592f2b80 517 Pfam PF03734 L,D-transpeptidase catalytic domain 291 458 1.1E-28 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VAA_01399 e7c56e373a190c686d63b9c6592f2b80 517 Gene3D G3DSA:2.40.440.10 234 452 8.6E-29 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAA_01399 e7c56e373a190c686d63b9c6592f2b80 517 SUPERFAMILY SSF47090 197 270 8.63E-11 T 13-10-2018 IPR036365 PGBD-like superfamily VAA_01399 e7c56e373a190c686d63b9c6592f2b80 517 Pfam PF01471 Putative peptidoglycan binding domain 230 263 1.0E-7 T 13-10-2018 IPR002477 Peptidoglycan binding-like VAA_02252 d49eac9cd6672f88e144d847698d016a 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 5.7E-99 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02252 d49eac9cd6672f88e144d847698d016a 268 SUPERFAMILY SSF51366 1 266 2.83E-93 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02252 d49eac9cd6672f88e144d847698d016a 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 4.8E-104 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02252 d49eac9cd6672f88e144d847698d016a 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.797 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_02252 d49eac9cd6672f88e144d847698d016a 268 Gene3D G3DSA:3.20.20.70 1 268 5.7E-99 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02252 d49eac9cd6672f88e144d847698d016a 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VAA_01597 2927e0f1b0d36688c4e5486e35f9dbc5 707 Pfam PF03477 ATP cone domain 5 90 1.1E-20 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VAA_01597 2927e0f1b0d36688c4e5486e35f9dbc5 707 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 116 706 1.3E-196 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VAA_01597 2927e0f1b0d36688c4e5486e35f9dbc5 707 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 117 706 1.6E-179 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VAA_01597 2927e0f1b0d36688c4e5486e35f9dbc5 707 ProSitePatterns PS00850 Glycine radical domain signature. 677 685 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VAA_01597 2927e0f1b0d36688c4e5486e35f9dbc5 707 SUPERFAMILY SSF51998 122 688 6.87E-193 T 13-10-2018 VAA_01597 2927e0f1b0d36688c4e5486e35f9dbc5 707 Gene3D G3DSA:3.20.70.20 122 688 3.6E-230 T 13-10-2018 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 Gene3D G3DSA:3.30.930.10 1 203 1.8E-64 T 13-10-2018 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 202 3.1E-71 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 SUPERFAMILY SSF55681 3 203 1.74E-68 T 13-10-2018 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.086 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 1.2E-8 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-21 T 13-10-2018 VAA_01103 ac98355efaea23f1624f6118f0b867a3 217 PIRSF PIRSF016262 1 216 7.1E-61 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 Gene3D G3DSA:1.10.275.10 2 197 3.5E-70 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 505 3.4E-213 T 13-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.012 T 13-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 Gene3D G3DSA:1.20.200.10 198 509 1.3E-121 T 13-10-2018 VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 SUPERFAMILY SSF48557 4 507 7.69E-192 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 13-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VAA_03127 d20140fb2cbd43245b8a0d4fd5809f72 510 Pfam PF00221 Aromatic amino acid lyase 11 470 9.2E-186 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VAA_03001 185edbcdd40bfe0e6e080ad1e62a6a59 286 Pfam PF01032 FecCD transport family 6 281 4.3E-61 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VAA_03001 185edbcdd40bfe0e6e080ad1e62a6a59 286 SUPERFAMILY SSF81345 7 281 8.76E-61 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_03001 185edbcdd40bfe0e6e080ad1e62a6a59 286 Gene3D G3DSA:1.10.3470.10 2 286 1.7E-58 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 14 461 42.385 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Pfam PF12804 MobA-like NTP transferase domain 17 141 3.4E-23 T 13-10-2018 IPR025877 MobA-like NTP transferase VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 309 342 3.2E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 404 436 4.6E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 277 308 2.4E-6 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Gene3D G3DSA:3.90.550.10 11 236 1.7E-68 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 SUPERFAMILY SSF51161 265 446 1.85E-48 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 16 463 2.0E-205 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 Gene3D G3DSA:2.160.10.10 237 465 1.3E-68 T 13-10-2018 VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 SUPERFAMILY SSF53448 13 261 3.34E-64 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_00823 83c8b07acfe83b3a9df636b9e0300ae2 465 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 412 440 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VAA_02093 c3ff89eeab1cb24ade8ebde6395dbfc4 163 Pfam PF02674 Colicin V production protein 4 142 1.2E-36 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VAA_01968 371ccf2d7cb8bb6e195828f3af3f323d 109 Pfam PF10694 Protein of unknown function (DUF2500) 3 105 1.6E-26 T 13-10-2018 IPR019635 Protein of unknown function DUF2500 VAA_01968 371ccf2d7cb8bb6e195828f3af3f323d 109 Gene3D G3DSA:2.40.50.660 32 108 2.7E-6 T 13-10-2018 VAA_01043 1537592d51786dde109946ef3a36f92a 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 260 3.7E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01043 1537592d51786dde109946ef3a36f92a 277 SUPERFAMILY SSF161098 7 276 1.96E-66 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01043 1537592d51786dde109946ef3a36f92a 277 Gene3D G3DSA:1.10.3720.10 2 264 3.9E-60 T 13-10-2018 IPR035906 MetI-like superfamily VAA_04084 868126a8a5f7a9a83917aa766ae5ae4c 68 Pfam PF06945 Protein of unknown function (DUF1289) 14 60 8.6E-16 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 VAA_04033 fbed2673092933b151426056a0e77b9f 211 Gene3D G3DSA:1.20.1280.100 17 87 4.5E-5 T 13-10-2018 VAA_04033 fbed2673092933b151426056a0e77b9f 211 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 163 4.5E-17 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_04033 fbed2673092933b151426056a0e77b9f 211 Pfam PF13007 Transposase C of IS166 homeodomain 42 111 5.8E-14 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_01478 9143816911f880628a6946d012060e32 678 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 254 385 2.2E-30 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VAA_01478 9143816911f880628a6946d012060e32 678 Gene3D G3DSA:3.40.50.1220 247 443 1.0E-33 T 13-10-2018 VAA_01478 9143816911f880628a6946d012060e32 678 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 40 675 2.1E-283 T 13-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 VAA_01478 9143816911f880628a6946d012060e32 678 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 41 228 1.2E-30 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VAA_01478 9143816911f880628a6946d012060e32 678 SUPERFAMILY SSF52518 35 244 1.77E-33 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01478 9143816911f880628a6946d012060e32 678 SUPERFAMILY SSF52518 451 661 2.14E-53 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_01478 9143816911f880628a6946d012060e32 678 Gene3D G3DSA:3.40.50.970 447 645 1.1E-47 T 13-10-2018 VAA_01478 9143816911f880628a6946d012060e32 678 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 510 529 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VAA_01478 9143816911f880628a6946d012060e32 678 SUPERFAMILY SSF52467 220 406 1.21E-39 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_01478 9143816911f880628a6946d012060e32 678 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 474 633 1.6E-39 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VAA_01478 9143816911f880628a6946d012060e32 678 Gene3D G3DSA:3.40.50.970 33 242 1.0E-31 T 13-10-2018 VAA_01804 08a580c193a60a6f4de3f0036c1c0826 394 Gene3D G3DSA:1.25.40.10 28 242 9.5E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01804 08a580c193a60a6f4de3f0036c1c0826 394 SUPERFAMILY SSF48452 138 334 5.91E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01804 08a580c193a60a6f4de3f0036c1c0826 394 SUPERFAMILY SSF48452 60 170 1.9E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01804 08a580c193a60a6f4de3f0036c1c0826 394 Pfam PF13181 Tetratricopeptide repeat 306 336 0.016 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01804 08a580c193a60a6f4de3f0036c1c0826 394 Gene3D G3DSA:1.25.40.10 243 374 2.1E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02325 6b75c92e951d91c9c73f0929728c0bb9 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.032 T 13-10-2018 IPR027354 YcgL domain VAA_02325 6b75c92e951d91c9c73f0929728c0bb9 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 2.0E-29 T 13-10-2018 IPR027354 YcgL domain VAA_02325 6b75c92e951d91c9c73f0929728c0bb9 93 Pfam PF05166 YcgL domain 3 74 4.8E-31 T 13-10-2018 IPR027354 YcgL domain VAA_02325 6b75c92e951d91c9c73f0929728c0bb9 93 Gene3D G3DSA:3.10.510.20 1 73 2.9E-29 T 13-10-2018 IPR038068 YcgL-like superfamily VAA_02325 6b75c92e951d91c9c73f0929728c0bb9 93 SUPERFAMILY SSF160191 1 92 1.07E-36 T 13-10-2018 IPR038068 YcgL-like superfamily VAA_02631 cc5838b3a5925b2fbbdc9c3b632c9e56 173 Gene3D G3DSA:2.30.30.830 93 173 4.7E-25 T 13-10-2018 VAA_02631 cc5838b3a5925b2fbbdc9c3b632c9e56 173 PIRSF PIRSF016481 1 173 3.6E-58 T 13-10-2018 IPR007446 Pilus assembly protein PilP VAA_02631 cc5838b3a5925b2fbbdc9c3b632c9e56 173 Pfam PF04351 Pilus assembly protein, PilP 27 172 3.6E-43 T 13-10-2018 IPR007446 Pilus assembly protein PilP VAA_03159 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 13-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VAA_03159 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 13-10-2018 IPR012994 Membrane bound YbgT-like VAA_03652 55aee0dcfd052d5c12bb7aa69694df80 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 7.7E-56 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_03652 55aee0dcfd052d5c12bb7aa69694df80 337 Gene3D G3DSA:3.90.25.10 195 330 1.9E-140 T 13-10-2018 VAA_03652 55aee0dcfd052d5c12bb7aa69694df80 337 Gene3D G3DSA:3.40.50.720 4 275 1.9E-140 T 13-10-2018 VAA_03652 55aee0dcfd052d5c12bb7aa69694df80 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 2.2E-139 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VAA_03652 55aee0dcfd052d5c12bb7aa69694df80 337 SUPERFAMILY SSF51735 2 336 4.21E-96 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01474 6a185702cda70a2f9eafae34718eaaa7 237 Gene3D G3DSA:3.30.420.10 47 224 6.0E-27 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_01474 6a185702cda70a2f9eafae34718eaaa7 237 SUPERFAMILY SSF53098 42 222 1.24E-31 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_01474 6a185702cda70a2f9eafae34718eaaa7 237 Pfam PF00929 Exonuclease 53 214 3.3E-10 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01474 6a185702cda70a2f9eafae34718eaaa7 237 SMART SM00479 51 223 2.8E-12 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VAA_01857 5fe09546935cb05c0aa84cf041a70a44 172 Pfam PF07977 FabA-like domain 29 158 3.4E-54 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_01857 5fe09546935cb05c0aa84cf041a70a44 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.3E-92 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_01857 5fe09546935cb05c0aa84cf041a70a44 172 Gene3D G3DSA:3.10.129.10 2 172 1.3E-65 T 13-10-2018 VAA_01857 5fe09546935cb05c0aa84cf041a70a44 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.612 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_01857 5fe09546935cb05c0aa84cf041a70a44 172 SUPERFAMILY SSF54637 4 169 4.97E-57 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03261 0a73b6f05bc6f2e18f21b16045282fde 185 Pfam PF04279 Intracellular septation protein A 15 158 2.1E-6 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAA_02266 0c275d8114260a5a8e383ec687bae7f8 334 Gene3D G3DSA:2.60.40.10 66 170 1.9E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 4.0E-51 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 4.0E-51 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 4.0E-51 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 4.0E-51 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 6.9E-67 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 240 15.859 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.7E-76 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VAA_00575 0178b4c1c7b4fb65b6804be11dcb9158 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 Pfam PF00005 ABC transporter 276 430 3.6E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 Pfam PF00005 ABC transporter 25 174 6.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 Gene3D G3DSA:3.40.50.300 258 498 4.1E-38 T 13-10-2018 VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 SMART SM00382 284 479 2.0 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 SMART SM00382 34 221 6.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 SUPERFAMILY SSF52540 8 229 5.84E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 SUPERFAMILY SSF52540 246 488 3.58E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02043 6e643c5b27168244d7bc69d0dfaff3c4 502 Gene3D G3DSA:3.40.50.300 1 242 4.5E-55 T 13-10-2018 VAA_02543 94450c15c4061f14b45db0c88adfe823 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 32.747 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VAA_02543 94450c15c4061f14b45db0c88adfe823 295 SUPERFAMILY SSF53335 45 291 1.79E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02543 94450c15c4061f14b45db0c88adfe823 295 PIRSF PIRSF000401 1 295 9.5E-96 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VAA_02543 94450c15c4061f14b45db0c88adfe823 295 Gene3D G3DSA:3.40.50.150 102 294 5.4E-55 T 13-10-2018 VAA_02543 94450c15c4061f14b45db0c88adfe823 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.7E-102 T 13-10-2018 VAA_02543 94450c15c4061f14b45db0c88adfe823 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 8.8E-106 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VAA_02229 8373d1d08955d0b3a3fd5a9bcceb64d9 412 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 6 407 1.9E-163 T 13-10-2018 IPR011340 Cysteine desulfurase-related VAA_02229 8373d1d08955d0b3a3fd5a9bcceb64d9 412 SUPERFAMILY SSF53383 8 409 3.23E-94 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02229 8373d1d08955d0b3a3fd5a9bcceb64d9 412 Gene3D G3DSA:3.90.1150.10 28 408 2.8E-135 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02229 8373d1d08955d0b3a3fd5a9bcceb64d9 412 Gene3D G3DSA:3.40.640.10 36 292 2.8E-135 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02229 8373d1d08955d0b3a3fd5a9bcceb64d9 412 Pfam PF00266 Aminotransferase class-V 29 404 1.9E-71 T 13-10-2018 IPR000192 Aminotransferase class V domain VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 Gene3D G3DSA:1.10.10.10 134 200 2.9E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 SUPERFAMILY SSF88946 13 124 3.85E-26 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 193 8.3E-26 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 SUPERFAMILY SSF88659 133 195 1.59E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 Pfam PF04542 Sigma-70 region 2 39 105 5.2E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 Gene3D G3DSA:1.10.1740.10 19 102 8.8E-25 T 13-10-2018 VAA_03623 c66f0e3cecb0471fe26168c0cd0699ce 200 Pfam PF04545 Sigma-70, region 4 148 193 3.5E-13 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VAA_00702 a1207bd0e9953134d7f029bbea133381 375 SUPERFAMILY SSF50331 240 344 4.14E-6 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VAA_00702 a1207bd0e9953134d7f029bbea133381 375 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_00702 a1207bd0e9953134d7f029bbea133381 375 Gene3D G3DSA:3.40.50.300 2 293 4.8E-79 T 13-10-2018 VAA_00702 a1207bd0e9953134d7f029bbea133381 375 Pfam PF00005 ABC transporter 18 164 5.0E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_00702 a1207bd0e9953134d7f029bbea133381 375 SUPERFAMILY SSF52540 3 246 7.38E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00702 a1207bd0e9953134d7f029bbea133381 375 SMART SM00382 27 214 1.5E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_00702 a1207bd0e9953134d7f029bbea133381 375 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 9.5E-115 T 13-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 VAA_00702 a1207bd0e9953134d7f029bbea133381 375 Pfam PF12857 TOBE-like domain 288 345 1.5E-11 T 13-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 VAA_02413 6db7596058fc066b2f1f7c4c66ecf893 219 PIRSF PIRSF006324 1 214 1.4E-48 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_02413 6db7596058fc066b2f1f7c4c66ecf893 219 Pfam PF01810 LysE type translocator 17 211 1.0E-32 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_01689 a2a4c3bdb73502b6c9b96edc33777a8c 857 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 668 1.8E-77 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VAA_01689 a2a4c3bdb73502b6c9b96edc33777a8c 857 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 722 4.8E-212 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VAA_01689 a2a4c3bdb73502b6c9b96edc33777a8c 857 Pfam PF11874 Domain of unknown function (DUF3394) 672 851 2.2E-70 T 13-10-2018 IPR021814 Protein of unknown function DUF3394 VAA_01977 828d12510e5771347d2a1ea75bbe96bf 228 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 5.8E-12 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAA_01977 828d12510e5771347d2a1ea75bbe96bf 228 SUPERFAMILY SSF48168 10 221 5.1E-74 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAA_01977 828d12510e5771347d2a1ea75bbe96bf 228 Gene3D G3DSA:3.20.70.20 77 228 5.1E-20 T 13-10-2018 VAA_01977 828d12510e5771347d2a1ea75bbe96bf 228 Pfam PF03477 ATP cone domain 6 92 2.2E-19 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VAA_01387 bafa490d61f0f33140a2742ea000b426 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 133 5.4E-20 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VAA_01173 9417f627fcfc62f79245eaa67dd525ac 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.252 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01173 9417f627fcfc62f79245eaa67dd525ac 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.9E-8 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01173 9417f627fcfc62f79245eaa67dd525ac 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01173 9417f627fcfc62f79245eaa67dd525ac 41 Pfam PF00444 Ribosomal protein L36 1 40 4.0E-17 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01173 9417f627fcfc62f79245eaa67dd525ac 41 SUPERFAMILY SSF57840 1 40 7.72E-14 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 Pfam PF02421 Ferrous iron transport protein B 4 161 1.2E-56 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 1.1E-18 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 Pfam PF07670 Nucleoside recognition 349 440 1.6E-13 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 Pfam PF07670 Nucleoside recognition 509 689 5.1E-38 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 686 4.6E-178 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 Gene3D G3DSA:3.40.50.300 4 175 1.8E-43 T 13-10-2018 VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 SUPERFAMILY SSF52540 4 176 1.0E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03399 8b720c44fea8c3ef110ced305d306b52 757 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 154 2.3E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_01287 bcb1e15b09244e424b08716a22d5839b 398 Pfam PF07690 Major Facilitator Superfamily 25 357 6.2E-44 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01287 bcb1e15b09244e424b08716a22d5839b 398 SUPERFAMILY SSF103473 6 393 8.24E-57 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01287 bcb1e15b09244e424b08716a22d5839b 398 Gene3D G3DSA:1.20.1720.10 14 389 1.1E-84 T 13-10-2018 VAA_03168 99c30f9e8dfcd928afb8e43767f37027 120 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 117 9.0E-58 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VAA_03168 99c30f9e8dfcd928afb8e43767f37027 120 Gene3D G3DSA:3.60.21.10 1 119 4.4E-12 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_03168 99c30f9e8dfcd928afb8e43767f37027 120 SUPERFAMILY SSF56300 1 119 5.13E-21 T 13-10-2018 VAA_03168 99c30f9e8dfcd928afb8e43767f37027 120 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 116 1.1E-6 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VAA_03168 99c30f9e8dfcd928afb8e43767f37027 120 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 120 66.004 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VAA_03387 da4451a169e9af722aae9ca630495641 202 SUPERFAMILY SSF75708 1 201 2.62E-65 T 13-10-2018 VAA_03387 da4451a169e9af722aae9ca630495641 202 PIRSF PIRSF002884 1 202 6.0E-89 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VAA_03387 da4451a169e9af722aae9ca630495641 202 Gene3D G3DSA:1.10.287.500 19 153 3.3E-47 T 13-10-2018 VAA_03387 da4451a169e9af722aae9ca630495641 202 Pfam PF04344 Chemotaxis phosphatase, CheZ 1 202 4.7E-78 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 Gene3D G3DSA:2.40.50.100 68 196 1.5E-72 T 13-10-2018 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 Gene3D G3DSA:2.40.420.20 280 351 1.5E-72 T 13-10-2018 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 Gene3D G3DSA:2.40.30.170 58 279 1.5E-72 T 13-10-2018 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 Gene3D G3DSA:1.10.287.470 103 162 1.5E-72 T 13-10-2018 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 Pfam PF00529 HlyD membrane-fusion protein of T1SS 270 339 2.2E-7 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 269 2.3E-27 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 SUPERFAMILY SSF111369 58 273 8.11E-40 T 13-10-2018 VAA_00589 85877f7bd8d6350b4607dee208b5988b 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 5.0E-73 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VAA_00644 66bd7920e2e5c31e5408426a27b3eba0 165 SUPERFAMILY SSF103054 85 163 8.37E-23 T 13-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VAA_00644 66bd7920e2e5c31e5408426a27b3eba0 165 PIRSF PIRSF006291 2 163 3.6E-36 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VAA_00644 66bd7920e2e5c31e5408426a27b3eba0 165 Gene3D G3DSA:3.30.1360.100 85 165 1.3E-31 T 13-10-2018 VAA_00644 66bd7920e2e5c31e5408426a27b3eba0 165 Pfam PF04612 Type II secretion system (T2SS), protein M 7 162 6.2E-48 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VAA_00938 dd89958fb62dd82772d3c8b314927372 127 SUPERFAMILY SSF54593 1 126 9.26E-31 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_00938 dd89958fb62dd82772d3c8b314927372 127 Gene3D G3DSA:3.10.180.10 7 125 2.1E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_00938 dd89958fb62dd82772d3c8b314927372 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 4.4E-19 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAA_01382 25461d2e6720a5fd0c97a629de2990d7 352 Gene3D G3DSA:3.40.250.10 122 278 1.2E-51 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01382 25461d2e6720a5fd0c97a629de2990d7 352 Gene3D G3DSA:3.30.70.100 19 121 8.6E-33 T 13-10-2018 VAA_01382 25461d2e6720a5fd0c97a629de2990d7 352 SMART SM00450 138 239 1.1E-22 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01382 25461d2e6720a5fd0c97a629de2990d7 352 Pfam PF00581 Rhodanese-like domain 145 235 8.9E-8 T 13-10-2018 IPR001763 Rhodanese-like domain VAA_01382 25461d2e6720a5fd0c97a629de2990d7 352 Hamap MF_00469 UPF0176 protein YceA [yceA]. 27 279 44.641 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 VAA_01382 25461d2e6720a5fd0c97a629de2990d7 352 SUPERFAMILY SSF52821 119 267 5.21E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 Gene3D G3DSA:1.20.1080.10 3 260 7.3E-98 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 SUPERFAMILY SSF81338 9 256 3.01E-74 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 Pfam PF00230 Major intrinsic protein 5 252 1.5E-62 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 4.9E-68 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 4.7E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 4.7E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 4.7E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 4.7E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 4.7E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01538 cef9c32db58c950bd0bd88a4da62e658 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 4.7E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VAA_01044 7bb3fa845a8e95b45ef164630e7113d6 138 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 118 7.6E-26 T 13-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VAA_01044 7bb3fa845a8e95b45ef164630e7113d6 138 Gene3D G3DSA:2.60.40.10 2 138 3.3E-32 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_01044 7bb3fa845a8e95b45ef164630e7113d6 138 SUPERFAMILY SSF81296 3 124 2.27E-32 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_02134 638fd6ece879e7863bd5e9e71baaeb52 549 PIRSF PIRSF002741 5 549 5.1E-91 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VAA_02134 638fd6ece879e7863bd5e9e71baaeb52 549 Gene3D G3DSA:3.10.105.10 306 524 5.7E-141 T 13-10-2018 VAA_02134 638fd6ece879e7863bd5e9e71baaeb52 549 Gene3D G3DSA:3.90.76.10 54 226 5.7E-141 T 13-10-2018 VAA_02134 638fd6ece879e7863bd5e9e71baaeb52 549 SUPERFAMILY SSF53850 44 545 1.68E-129 T 13-10-2018 VAA_02134 638fd6ece879e7863bd5e9e71baaeb52 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 465 4.6E-83 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_02134 638fd6ece879e7863bd5e9e71baaeb52 549 Gene3D G3DSA:3.40.190.10 227 536 5.7E-141 T 13-10-2018 VAA_01564 4020691c07a0368c41500ef591694c6a 424 Gene3D G3DSA:3.40.190.10 125 278 1.7E-20 T 13-10-2018 VAA_01564 4020691c07a0368c41500ef591694c6a 424 Gene3D G3DSA:3.40.190.10 2 124 4.1E-10 T 13-10-2018 VAA_01564 4020691c07a0368c41500ef591694c6a 424 SUPERFAMILY SSF53850 20 278 1.17E-31 T 13-10-2018 VAA_01564 4020691c07a0368c41500ef591694c6a 424 Pfam PF13343 Bacterial extracellular solute-binding protein 69 279 7.8E-17 T 13-10-2018 VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 303 55.011 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 305 1.8E-108 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 Gene3D G3DSA:1.10.443.10 120 297 9.0E-57 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 Pfam PF00589 Phage integrase family 121 289 1.5E-49 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 Gene3D G3DSA:1.10.150.130 13 107 5.9E-18 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 99 1.4E-20 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VAA_01958 b0d26dfb378162e5ed687eabffbefbfb 310 SUPERFAMILY SSF56349 16 297 5.89E-53 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_03120 3f2b15d1f452e2df064a76bef56eef00 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.477 T 13-10-2018 IPR007376 dsDNA mimic, putative VAA_03120 3f2b15d1f452e2df064a76bef56eef00 106 Gene3D G3DSA:3.10.450.140 5 105 1.2E-40 T 13-10-2018 IPR036763 Putative dsDNA mimic superfamily VAA_03120 3f2b15d1f452e2df064a76bef56eef00 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 7.0E-33 T 13-10-2018 IPR007376 dsDNA mimic, putative VAA_03120 3f2b15d1f452e2df064a76bef56eef00 106 SUPERFAMILY SSF102816 3 105 1.31E-47 T 13-10-2018 IPR036763 Putative dsDNA mimic superfamily VAA_03120 3f2b15d1f452e2df064a76bef56eef00 106 PIRSF PIRSF004916 1 105 5.9E-51 T 13-10-2018 IPR007376 dsDNA mimic, putative VAA_03120 3f2b15d1f452e2df064a76bef56eef00 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 5.1E-45 T 13-10-2018 IPR007376 dsDNA mimic, putative VAA_00718 d11ed74d17226c35d354305e106d3056 109 Pfam PF01595 Domain of unknown function DUF21 14 91 2.5E-25 T 13-10-2018 IPR002550 CNNM, transmembrane domain VAA_03903 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_03991 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_02010 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_04059 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_04058 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_04240 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_04081 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_01201 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_00443 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_03956 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_02832 f303e505d890b5aa3aaf1818cac59a93 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_00284 c6200747fa5506c3306f18e1de3dcaa0 132 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 35 123 2.1E-17 T 13-10-2018 IPR009241 Toxin HigB-like VAA_00502 256ac16857b70d55d766b2ee52142b69 461 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 29 377 6.3E-135 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VAA_00502 256ac16857b70d55d766b2ee52142b69 461 Pfam PF13742 OB-fold nucleic acid binding domain 28 121 4.0E-29 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VAA_00502 256ac16857b70d55d766b2ee52142b69 461 Pfam PF02601 Exonuclease VII, large subunit 144 456 7.4E-102 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VAA_00502 256ac16857b70d55d766b2ee52142b69 461 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 25 461 30.742 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VAA_02345 f8af7f5d075b77f1ff2c15c04cba503a 294 PIRSF PIRSF016020 3 294 4.8E-64 T 13-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VAA_02345 f8af7f5d075b77f1ff2c15c04cba503a 294 Gene3D G3DSA:2.70.98.10 1 292 1.7E-88 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VAA_02345 f8af7f5d075b77f1ff2c15c04cba503a 294 SUPERFAMILY SSF74650 6 289 8.79E-74 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VAA_02345 f8af7f5d075b77f1ff2c15c04cba503a 294 Pfam PF01263 Aldose 1-epimerase 27 289 1.5E-49 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VAA_00152 befa1406a6a410cb2a2f8c81c811eb8a 83 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.6E-19 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 VAA_01010 6687a47dba4763c348f196c249ea6d9f 1013 Gene3D G3DSA:3.40.50.300 1 275 2.9E-40 T 13-10-2018 VAA_01010 6687a47dba4763c348f196c249ea6d9f 1013 Pfam PF13476 AAA domain 5 340 1.2E-18 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain VAA_01010 6687a47dba4763c348f196c249ea6d9f 1013 Pfam PF13558 Putative exonuclease SbcCD, C subunit 905 971 2.1E-11 T 13-10-2018 VAA_01010 6687a47dba4763c348f196c249ea6d9f 1013 SUPERFAMILY SSF52540 1 999 8.12E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03348 46a135bc388216eb47ec79cd30067cd0 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 9.1E-17 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VAA_01428 184f2e6d206b6e8411c6c52f90c94bc0 209 SUPERFAMILY SSF55811 40 199 1.49E-32 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_01428 184f2e6d206b6e8411c6c52f90c94bc0 209 Gene3D G3DSA:3.90.79.10 20 205 1.4E-46 T 13-10-2018 VAA_01428 184f2e6d206b6e8411c6c52f90c94bc0 209 Pfam PF00293 NUDIX domain 50 160 2.5E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_00036 c9d6fac7f29c2912be9b686fde039fe4 191 SUPERFAMILY SSF52540 19 100 7.51E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00036 c9d6fac7f29c2912be9b686fde039fe4 191 Gene3D G3DSA:3.40.50.300 7 178 2.1E-11 T 13-10-2018 VAA_00036 c9d6fac7f29c2912be9b686fde039fe4 191 Pfam PF13476 AAA domain 20 151 4.0E-8 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain VAA_01765 845836d794448bb42eccc64d929151c0 158 Hamap MF_00598 Protein Smg [smg]. 2 158 32.713 T 13-10-2018 IPR007456 Smg VAA_01765 845836d794448bb42eccc64d929151c0 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 2.8E-59 T 13-10-2018 IPR007456 Smg VAA_02706 1e70b378f8131a5b2996380c6da7ee33 273 SUPERFAMILY SSF56059 117 211 1.06E-7 T 13-10-2018 VAA_00725 05cabfe7f5e8f17852fbcece2f45bd6f 69 Pfam PF03884 DNA gyrase inhibitor YacG 12 62 1.7E-24 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VAA_00725 05cabfe7f5e8f17852fbcece2f45bd6f 69 Gene3D G3DSA:3.30.50.10 5 69 2.3E-24 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VAA_00725 05cabfe7f5e8f17852fbcece2f45bd6f 69 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 8 64 18.254 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VAA_00725 05cabfe7f5e8f17852fbcece2f45bd6f 69 SUPERFAMILY SSF57716 9 67 5.42E-21 T 13-10-2018 VAA_02256 797f87e094743156d8971f6faafa6c93 188 Pfam PF04279 Intracellular septation protein A 1 174 3.0E-67 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAA_02256 797f87e094743156d8971f6faafa6c93 188 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 3.9E-64 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAA_02256 797f87e094743156d8971f6faafa6c93 188 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.554 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VAA_03373 910ec6651b80c24e3812356f9ab8cd47 165 Gene3D G3DSA:1.10.8.640 20 105 5.3E-37 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VAA_03373 910ec6651b80c24e3812356f9ab8cd47 165 Pfam PF03918 Cytochrome C biogenesis protein 10 151 1.7E-53 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VAA_01155 4a954c56f170fa03f1a45950eea55efb 455 Gene3D G3DSA:3.30.1850.10 1 120 1.7E-57 T 13-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VAA_01155 4a954c56f170fa03f1a45950eea55efb 455 Pfam PF03641 Possible lysine decarboxylase 187 326 1.0E-35 T 13-10-2018 IPR031100 LOG family VAA_01155 4a954c56f170fa03f1a45950eea55efb 455 SUPERFAMILY SSF102405 121 326 1.13E-41 T 13-10-2018 VAA_01155 4a954c56f170fa03f1a45950eea55efb 455 Gene3D G3DSA:3.40.50.450 121 450 3.3E-125 T 13-10-2018 VAA_01155 4a954c56f170fa03f1a45950eea55efb 455 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 8.2E-51 T 13-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VAA_01155 4a954c56f170fa03f1a45950eea55efb 455 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 4.9E-57 T 13-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VAA_03358 d060210753f2b3526190445e1e939cde 418 SUPERFAMILY SSF47226 306 415 1.09E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03358 d060210753f2b3526190445e1e939cde 418 Gene3D G3DSA:1.20.120.160 306 417 4.7E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_03358 d060210753f2b3526190445e1e939cde 418 Pfam PF01627 Hpt domain 328 407 4.5E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Pfam PF13932 GidA associated domain 403 616 2.9E-75 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 SMART SM01228 546 617 1.3E-41 T 13-10-2018 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 SUPERFAMILY SSF51905 5 261 8.15E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.368 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Gene3D G3DSA:3.50.50.60 296 458 1.1E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Gene3D G3DSA:3.50.50.60 1 235 1.3E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.6E-292 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Gene3D G3DSA:1.10.150.570 569 622 2.0E-22 T 13-10-2018 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Gene3D G3DSA:1.10.10.1800 459 550 4.8E-31 T 13-10-2018 VAA_00836 b74775c60889e4bb9ca3b7a3ee34da45 632 Pfam PF01134 Glucose inhibited division protein A 8 399 1.2E-168 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 PIRSF PIRSF000813 1 403 4.8E-201 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Pfam PF01966 HD domain 231 328 1.9E-8 T 13-10-2018 IPR006674 HD domain VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.295 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 SUPERFAMILY SSF81301 2 119 4.14E-31 T 13-10-2018 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Gene3D G3DSA:1.10.3090.10 122 403 3.5E-46 T 13-10-2018 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 SUPERFAMILY SSF81891 120 400 1.09E-55 T 13-10-2018 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 52.71 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Gene3D G3DSA:3.30.460.10 1 121 4.0E-28 T 13-10-2018 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Pfam PF01743 Poly A polymerase head domain 3 122 7.9E-18 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAA_03763 f0aa410f1cb4ab60917e51c7db2e015d 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 6.5E-15 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VAA_01039 7df9f3b4ff8e6162418c0d4ea9ae1cb1 336 Gene3D G3DSA:2.160.10.10 98 297 1.4E-53 T 13-10-2018 VAA_01039 7df9f3b4ff8e6162418c0d4ea9ae1cb1 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 246 280 0.0019 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_01039 7df9f3b4ff8e6162418c0d4ea9ae1cb1 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 148 3.3E-10 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_01039 7df9f3b4ff8e6162418c0d4ea9ae1cb1 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 210 235 1.3E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_01039 7df9f3b4ff8e6162418c0d4ea9ae1cb1 336 SUPERFAMILY SSF51161 101 303 3.82E-56 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_02271 a6727c454ca03dc802e1e5b0c44b5c9e 415 Pfam PF02353 Mycolic acid cyclopropane synthetase 139 407 1.7E-79 T 13-10-2018 VAA_02271 a6727c454ca03dc802e1e5b0c44b5c9e 415 SUPERFAMILY SSF53335 20 367 6.09E-91 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02271 a6727c454ca03dc802e1e5b0c44b5c9e 415 Gene3D G3DSA:3.40.50.150 145 415 1.2E-98 T 13-10-2018 VAA_02271 a6727c454ca03dc802e1e5b0c44b5c9e 415 PIRSF PIRSF003085 22 415 3.1E-121 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 Pfam PF01245 Ribosomal protein L19 3 113 5.4E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 SUPERFAMILY SSF50104 2 115 1.6E-47 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.325 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 7.6E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 PIRSF PIRSF002191 1 117 2.5E-51 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.3E-40 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.3E-40 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00724 e84f24862a06fe42eb4161c4300ae339 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.3E-40 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03568 dfd0caa712a0abd0a61ae62fd1b5037e 169 PIRSF PIRSF002094 1 169 3.9E-40 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VAA_03568 dfd0caa712a0abd0a61ae62fd1b5037e 169 SUPERFAMILY SSF111384 26 169 6.93E-31 T 13-10-2018 VAA_03568 dfd0caa712a0abd0a61ae62fd1b5037e 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 1.1E-24 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VAA_03568 dfd0caa712a0abd0a61ae62fd1b5037e 169 Gene3D G3DSA:3.30.910.20 25 169 3.2E-35 T 13-10-2018 IPR024930 Skp domain superfamily VAA_03568 dfd0caa712a0abd0a61ae62fd1b5037e 169 SMART SM00935 15 169 2.6E-41 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VAA_03070 fc663144cc8185d0f047c83368bec1ea 344 Pfam PF05971 Protein of unknown function (DUF890) 22 332 1.1E-133 T 13-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VAA_03070 fc663144cc8185d0f047c83368bec1ea 344 PIRSF PIRSF029038 13 344 1.5E-151 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VAA_03070 fc663144cc8185d0f047c83368bec1ea 344 Gene3D G3DSA:3.40.50.150 57 332 2.2E-77 T 13-10-2018 VAA_03070 fc663144cc8185d0f047c83368bec1ea 344 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 24 334 54.3 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VAA_03070 fc663144cc8185d0f047c83368bec1ea 344 SUPERFAMILY SSF53335 62 332 1.69E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02597 fac501a7ec0a28c65a1022651c1fe7c1 155 Pfam PF05656 Protein of unknown function (DUF805) 22 154 7.7E-22 T 13-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 3.4E-19 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 Gene3D G3DSA:3.90.780.10 420 593 1.1E-50 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 Gene3D G3DSA:3.60.21.10 22 360 1.0E-135 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 SUPERFAMILY SSF55816 361 603 3.66E-37 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 PRINTS PR01607 Apyrase family signature 434 457 7.2E-30 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 PRINTS PR01607 Apyrase family signature 536 555 7.2E-30 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 PRINTS PR01607 Apyrase family signature 289 309 7.2E-30 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 PRINTS PR01607 Apyrase family signature 221 238 7.2E-30 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 PRINTS PR01607 Apyrase family signature 28 46 7.2E-30 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 PRINTS PR01607 Apyrase family signature 249 272 7.2E-30 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 652 0.0 T 13-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 SUPERFAMILY SSF56300 23 360 1.21E-85 T 13-10-2018 VAA_02709 27b067ea485cff95a784dbea5c92b6fd 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 6.7E-11 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VAA_01315 32bb95e09b5f0c4b1b8d5d92cebd4cae 265 Gene3D G3DSA:3.30.1330.80 110 232 6.5E-77 T 13-10-2018 VAA_01315 32bb95e09b5f0c4b1b8d5d92cebd4cae 265 Pfam PF03306 Alpha-acetolactate decarboxylase 35 252 2.2E-80 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VAA_01315 32bb95e09b5f0c4b1b8d5d92cebd4cae 265 SUPERFAMILY SSF117856 34 264 1.1E-80 T 13-10-2018 VAA_01315 32bb95e09b5f0c4b1b8d5d92cebd4cae 265 PIRSF PIRSF001332 19 265 4.6E-91 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VAA_01315 32bb95e09b5f0c4b1b8d5d92cebd4cae 265 Gene3D G3DSA:3.30.1330.80 35 251 6.5E-77 T 13-10-2018 VAA_01315 32bb95e09b5f0c4b1b8d5d92cebd4cae 265 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 34 264 1.6E-94 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VAA_00553 e6250ad0ba78d44785fd281430df65e4 141 SUPERFAMILY SSF52402 3 139 4.69E-32 T 13-10-2018 VAA_00553 e6250ad0ba78d44785fd281430df65e4 141 PIRSF PIRSF006276 1 141 5.8E-52 T 13-10-2018 IPR006015 Universal stress protein A VAA_00553 e6250ad0ba78d44785fd281430df65e4 141 Pfam PF00582 Universal stress protein family 3 138 6.2E-21 T 13-10-2018 IPR006016 UspA VAA_00553 e6250ad0ba78d44785fd281430df65e4 141 Gene3D G3DSA:3.40.50.620 2 141 1.5E-46 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02714 e02d5e221ba9aac19cee1311228caf68 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 9.4E-106 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 VAA_02714 e02d5e221ba9aac19cee1311228caf68 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 1.2E-85 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 VAA_01815 cbe161813aa9ac077072678226cfd6f0 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_01815 cbe161813aa9ac077072678226cfd6f0 303 Gene3D G3DSA:3.30.420.40 4 297 7.6E-99 T 13-10-2018 VAA_01815 cbe161813aa9ac077072678226cfd6f0 303 Gene3D G3DSA:3.30.420.40 119 290 7.6E-99 T 13-10-2018 VAA_01815 cbe161813aa9ac077072678226cfd6f0 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 63.466 T 13-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VAA_01815 cbe161813aa9ac077072678226cfd6f0 303 SUPERFAMILY SSF53067 1 300 6.49E-57 T 13-10-2018 VAA_01815 cbe161813aa9ac077072678226cfd6f0 303 Pfam PF00480 ROK family 2 300 5.0E-72 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.9E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.9E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.9E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 Pfam PF00376 MerR family regulatory protein 4 40 9.3E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 SUPERFAMILY SSF46955 2 121 1.76E-32 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 SMART SM00422 2 71 1.4E-28 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 Pfam PF09278 MerR, DNA binding 46 109 4.5E-17 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.7E-64 T 13-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VAA_02537 5a7d454e22a0839d290d5f87533b0214 132 Gene3D G3DSA:1.10.1660.10 1 129 6.9E-35 T 13-10-2018 VAA_02085 4835c293221863259c224b086bb1dc6d 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.0E-65 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VAA_02085 4835c293221863259c224b086bb1dc6d 212 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.015 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VAA_02085 4835c293221863259c224b086bb1dc6d 212 Pfam PF04205 FMN-binding domain 100 188 6.8E-21 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAA_02085 4835c293221863259c224b086bb1dc6d 212 SMART SM00900 100 192 1.4E-33 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VAA_02085 4835c293221863259c224b086bb1dc6d 212 PIRSF PIRSF006091 1 204 9.9E-80 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VAA_02642 82fa67f675fad356600dbe0e48cc5c3b 296 SUPERFAMILY SSF46785 4 112 6.53E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02642 82fa67f675fad356600dbe0e48cc5c3b 296 Gene3D G3DSA:1.10.10.10 3 92 2.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02642 82fa67f675fad356600dbe0e48cc5c3b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.4E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02642 82fa67f675fad356600dbe0e48cc5c3b 296 Pfam PF03466 LysR substrate binding domain 90 293 5.6E-33 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02642 82fa67f675fad356600dbe0e48cc5c3b 296 SUPERFAMILY SSF53850 90 295 1.99E-35 T 13-10-2018 VAA_02642 82fa67f675fad356600dbe0e48cc5c3b 296 Gene3D G3DSA:3.40.190.290 93 294 8.4E-47 T 13-10-2018 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 35 53 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 150 169 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 170 189 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 232 251 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 69 87 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 298 319 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 356 375 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 PRINTS PR00181 Maltose binding protein signature 129 148 1.6E-79 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 Gene3D G3DSA:3.40.190.10 137 387 2.1E-134 T 13-10-2018 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 Pfam PF13416 Bacterial extracellular solute-binding protein 49 320 1.7E-44 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_01251 99a721d8069be4dd996e23ce6de43359 395 Gene3D G3DSA:3.40.190.10 47 356 2.1E-134 T 13-10-2018 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 132 149 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VAA_01251 99a721d8069be4dd996e23ce6de43359 395 SUPERFAMILY SSF53850 27 394 2.95E-89 T 13-10-2018 VAA_00850 bf672469e74dc687ebea68d7f34ce4a3 133 SUPERFAMILY SSF54534 51 124 2.62E-7 T 13-10-2018 VAA_00850 bf672469e74dc687ebea68d7f34ce4a3 133 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 51 123 4.6E-7 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VAA_00850 bf672469e74dc687ebea68d7f34ce4a3 133 Gene3D G3DSA:3.10.50.30 48 130 1.8E-8 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VAA_03759 a7e67cb34026293f514c4c3d942dd010 449 Pfam PF01384 Phosphate transporter family 56 437 4.2E-112 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VAA_00250 359b9e612fc33f2fba27c4d47e41c179 144 PIRSF PIRSF028777 2 139 1.7E-53 T 13-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VAA_00250 359b9e612fc33f2fba27c4d47e41c179 144 Pfam PF03733 Inner membrane component domain 77 127 2.3E-18 T 13-10-2018 IPR005185 Inner membrane component domain VAA_00250 359b9e612fc33f2fba27c4d47e41c179 144 Pfam PF03733 Inner membrane component domain 5 55 4.7E-14 T 13-10-2018 IPR005185 Inner membrane component domain VAA_00905 d9c9cfebd34ec62fd72ecbc7eb23b813 188 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 6.3E-56 T 13-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 VAA_00905 d9c9cfebd34ec62fd72ecbc7eb23b813 188 SUPERFAMILY SSF55729 21 146 2.36E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00905 d9c9cfebd34ec62fd72ecbc7eb23b813 188 Gene3D G3DSA:3.40.630.30 24 183 5.1E-44 T 13-10-2018 VAA_00905 d9c9cfebd34ec62fd72ecbc7eb23b813 188 Pfam PF00583 Acetyltransferase (GNAT) family 58 146 8.7E-14 T 13-10-2018 IPR000182 GNAT domain VAA_00072 57737ece70207a0a7008d5ae4723f17f 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.6E-15 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 Gene3D G3DSA:2.30.330.10 45 136 1.1E-33 T 13-10-2018 IPR036429 SpoA-like superfamily VAA_03448 9fd4d9b49e60178356ad0332724654a4 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 13-10-2018 IPR036429 SpoA-like superfamily VAA_00437 77a3bc691e17a7dbb7583c90191883fd 241 Pfam PF13525 Outer membrane lipoprotein 26 234 1.7E-79 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VAA_00437 77a3bc691e17a7dbb7583c90191883fd 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 239 2.6E-78 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD VAA_00437 77a3bc691e17a7dbb7583c90191883fd 241 Gene3D G3DSA:1.25.40.10 28 241 5.9E-54 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00437 77a3bc691e17a7dbb7583c90191883fd 241 SUPERFAMILY SSF48452 30 119 1.52E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00437 77a3bc691e17a7dbb7583c90191883fd 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 36.985 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD VAA_02846 ee1330738bb777c95c45908aa22c35b1 465 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 125 5.5E-27 T 13-10-2018 IPR010657 ImpA, N-terminal VAA_02846 ee1330738bb777c95c45908aa22c35b1 465 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 214 461 3.4E-82 T 13-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VAA_02846 ee1330738bb777c95c45908aa22c35b1 465 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 8 462 7.4E-130 T 13-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VAA_01837 e58c8712b832a75dae6b4a7c1c8891d9 268 Gene3D G3DSA:1.10.530.10 122 263 3.6E-14 T 13-10-2018 VAA_01837 e58c8712b832a75dae6b4a7c1c8891d9 268 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 126 263 1.4E-17 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VAA_02040 21bb65fbf058b40744b2bda473b17480 67 Pfam PF04400 (Na+)-NQR maturation NqrM 21 63 1.9E-19 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VAA_03248 9e6b84ecc834b4001d5c9c1f6a493761 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 4.4E-40 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_03248 9e6b84ecc834b4001d5c9c1f6a493761 306 Gene3D G3DSA:1.10.3720.10 84 300 7.5E-20 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03248 9e6b84ecc834b4001d5c9c1f6a493761 306 SUPERFAMILY SSF161098 88 291 8.5E-19 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02787 965c8bcda2b6de06113a3976a869a988 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VAA_02787 965c8bcda2b6de06113a3976a869a988 266 Gene3D G3DSA:3.40.50.1360 1 266 2.8E-117 T 13-10-2018 VAA_02787 965c8bcda2b6de06113a3976a869a988 266 SUPERFAMILY SSF100950 1 263 2.51E-102 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_02787 965c8bcda2b6de06113a3976a869a988 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.7E-139 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VAA_02787 965c8bcda2b6de06113a3976a869a988 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.591 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VAA_02787 965c8bcda2b6de06113a3976a869a988 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 229 1.4E-19 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 SMART SM00938 6 107 4.8E-69 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 SUPERFAMILY SSF54913 3 114 6.99E-47 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 2.4E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 Gene3D G3DSA:3.30.70.120 1 114 8.1E-49 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 PIRSF PIRSF039144 3 114 2.9E-58 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 PRINTS PR00340 P-II protein signature 25 43 2.7E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 PRINTS PR00340 P-II protein signature 54 77 2.7E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 PRINTS PR00340 P-II protein signature 85 105 2.7E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_03557 795d1fbf88d90f7c770627bc28723d64 114 PRINTS PR00340 P-II protein signature 4 19 2.7E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VAA_00546 8a73c289e2f96f80a0c6b84f43853db0 84 Pfam PF00037 4Fe-4S binding domain 5 25 1.1E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_00546 8a73c289e2f96f80a0c6b84f43853db0 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_00546 8a73c289e2f96f80a0c6b84f43853db0 84 SUPERFAMILY SSF54862 5 71 9.07E-17 T 13-10-2018 VAA_00546 8a73c289e2f96f80a0c6b84f43853db0 84 Gene3D G3DSA:3.30.70.20 2 83 8.6E-34 T 13-10-2018 VAA_03496 917d7751e9c8222a74022691ebead303 176 Gene3D G3DSA:3.90.960.10 15 176 1.8E-57 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAA_03496 917d7751e9c8222a74022691ebead303 176 SUPERFAMILY SSF55826 20 174 8.89E-43 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VAA_03496 917d7751e9c8222a74022691ebead303 176 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 20 174 3.5E-58 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VAA_03496 917d7751e9c8222a74022691ebead303 176 Pfam PF04073 Aminoacyl-tRNA editing domain 50 162 2.1E-24 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VAA_03496 917d7751e9c8222a74022691ebead303 176 PIRSF PIRSF006181 15 176 1.0E-53 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VAA_04305 d9c4208d24852769c3729e254404ca60 562 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 306 8.2E-18 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_04305 d9c4208d24852769c3729e254404ca60 562 Gene3D G3DSA:3.40.190.10 122 312 4.2E-31 T 13-10-2018 VAA_04305 d9c4208d24852769c3729e254404ca60 562 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 1.7E-38 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VAA_04305 d9c4208d24852769c3729e254404ca60 562 SUPERFAMILY SSF53850 121 558 5.79E-56 T 13-10-2018 VAA_02315 8c1726bc0eb003e27c13d12a62a02026 447 Gene3D G3DSA:2.40.30.10 223 318 1.8E-13 T 13-10-2018 VAA_02315 8c1726bc0eb003e27c13d12a62a02026 447 Gene3D G3DSA:3.40.50.80 322 447 2.0E-15 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_02315 8c1726bc0eb003e27c13d12a62a02026 447 Pfam PF01794 Ferric reductase like transmembrane component 47 184 1.2E-18 T 13-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VAA_02315 8c1726bc0eb003e27c13d12a62a02026 447 SUPERFAMILY SSF52343 316 446 2.88E-19 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VAA_02315 8c1726bc0eb003e27c13d12a62a02026 447 Pfam PF08022 FAD-binding domain 242 318 5.0E-8 T 13-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 VAA_02315 8c1726bc0eb003e27c13d12a62a02026 447 SUPERFAMILY SSF63380 240 320 4.0E-15 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VAA_01489 4c54c7ff301e9c24e1ef0a5c0e8b564b 625 Gene3D G3DSA:3.40.50.1390 12 178 6.9E-25 T 13-10-2018 VAA_01489 4c54c7ff301e9c24e1ef0a5c0e8b564b 625 Pfam PF07508 Recombinase 215 305 1.3E-11 T 13-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 VAA_01489 4c54c7ff301e9c24e1ef0a5c0e8b564b 625 Pfam PF00239 Resolvase, N terminal domain 15 170 9.8E-15 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAA_01489 4c54c7ff301e9c24e1ef0a5c0e8b564b 625 SUPERFAMILY SSF53041 15 169 1.7E-10 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VAA_01489 4c54c7ff301e9c24e1ef0a5c0e8b564b 625 SMART SM00857 15 175 2.0E-16 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VAA_01411 37fedf14af59a5ddceec1e1fffe42ba5 390 SMART SM00283 86 338 9.3E-13 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01411 37fedf14af59a5ddceec1e1fffe42ba5 390 SUPERFAMILY SSF58104 99 339 3.92E-40 T 13-10-2018 VAA_01411 37fedf14af59a5ddceec1e1fffe42ba5 390 Gene3D G3DSA:1.10.287.950 47 353 8.7E-39 T 13-10-2018 VAA_01411 37fedf14af59a5ddceec1e1fffe42ba5 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 150 305 2.0E-27 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01830 7db6eb76dad8d54c3fbbd67f4b26ce8e 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.273 T 13-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VAA_01830 7db6eb76dad8d54c3fbbd67f4b26ce8e 245 Pfam PF02146 Sir2 family 13 186 2.0E-50 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 VAA_01830 7db6eb76dad8d54c3fbbd67f4b26ce8e 245 Gene3D G3DSA:3.30.1600.10 22 158 3.7E-80 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VAA_01830 7db6eb76dad8d54c3fbbd67f4b26ce8e 245 SUPERFAMILY SSF52467 6 234 1.89E-72 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VAA_01830 7db6eb76dad8d54c3fbbd67f4b26ce8e 245 Gene3D G3DSA:3.40.50.1220 8 225 3.7E-80 T 13-10-2018 VAA_03728 ac525ba8330755492e7cd598e98d896d 552 Gene3D G3DSA:1.25.40.650 102 205 2.3E-18 T 13-10-2018 VAA_03728 ac525ba8330755492e7cd598e98d896d 552 SUPERFAMILY SSF53822 211 548 1.85E-73 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_03728 ac525ba8330755492e7cd598e98d896d 552 Gene3D G3DSA:3.40.50.2300 318 546 1.6E-68 T 13-10-2018 VAA_03728 ac525ba8330755492e7cd598e98d896d 552 Gene3D G3DSA:3.40.50.2300 212 545 1.6E-68 T 13-10-2018 VAA_03728 ac525ba8330755492e7cd598e98d896d 552 Pfam PF04348 LppC putative lipoprotein 1 550 4.2E-180 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA VAA_03728 ac525ba8330755492e7cd598e98d896d 552 Gene3D G3DSA:1.25.40.10 1 95 3.2E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00465 26fd9a66080b12b6311b462b420d72f2 125 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 116 8.0E-45 T 13-10-2018 IPR009867 Protein of unknown function DUF1422 VAA_00465 26fd9a66080b12b6311b462b420d72f2 125 Pfam PF07226 Protein of unknown function (DUF1422) 10 118 3.1E-49 T 13-10-2018 IPR009867 Protein of unknown function DUF1422 VAA_02500 768a63c16d33874db8f33ee1e4a282e1 371 PIRSF PIRSF000390 1 371 3.2E-99 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAA_02500 768a63c16d33874db8f33ee1e4a282e1 371 Gene3D G3DSA:3.90.1150.10 253 370 8.6E-32 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02500 768a63c16d33874db8f33ee1e4a282e1 371 Gene3D G3DSA:3.40.640.10 1 251 6.1E-83 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02500 768a63c16d33874db8f33ee1e4a282e1 371 SUPERFAMILY SSF53383 13 370 2.09E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02500 768a63c16d33874db8f33ee1e4a282e1 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 366 2.1E-125 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAA_02795 d5a64361a6ce5ded58fafa97634e5820 147 Pfam PF07681 DoxX 17 103 5.8E-23 T 13-10-2018 IPR032808 DoxX family VAA_02730 9bfc23033c8c6e13dbac826a60ef7a99 531 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 253 3.9E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_02730 9bfc23033c8c6e13dbac826a60ef7a99 531 SUPERFAMILY SSF161098 283 522 4.67E-31 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02730 9bfc23033c8c6e13dbac826a60ef7a99 531 SUPERFAMILY SSF161098 18 256 6.41E-37 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02730 9bfc23033c8c6e13dbac826a60ef7a99 531 Gene3D G3DSA:1.10.3720.10 285 529 3.6E-25 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02730 9bfc23033c8c6e13dbac826a60ef7a99 531 Gene3D G3DSA:1.10.3720.10 6 259 4.5E-39 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02730 9bfc23033c8c6e13dbac826a60ef7a99 531 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 518 6.1E-165 T 13-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VAA_03425 bef64587d829268acf78b5be038107eb 233 Pfam PF04172 LrgB-like family 18 228 7.1E-70 T 13-10-2018 IPR007300 CidB/LrgB family VAA_01527 a0e8725efb1f184929ef7336cee6b781 277 Pfam PF01226 Formate/nitrite transporter 16 264 6.4E-63 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VAA_01527 a0e8725efb1f184929ef7336cee6b781 277 Gene3D G3DSA:1.20.1080.10 3 257 4.7E-65 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VAA_01099 0ac085627ba48e93c22d1134e814f072 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.198 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_01099 0ac085627ba48e93c22d1134e814f072 373 Pfam PF01098 Cell cycle protein 24 367 1.8E-111 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_01099 0ac085627ba48e93c22d1134e814f072 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_01099 0ac085627ba48e93c22d1134e814f072 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.6E-134 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.3E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.3E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.3E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.3E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.3E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.3E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.5E-86 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VAA_03378 d72025a3121db3a96300c2a3b47752e8 250 Pfam PF01578 Cytochrome C assembly protein 31 184 4.8E-33 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VAA_02619 cadbe6ec9f81b2e306bc7e2de51f5480 261 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 253 41.945 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02619 cadbe6ec9f81b2e306bc7e2de51f5480 261 Pfam PF00696 Amino acid kinase family 9 236 2.6E-34 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_02619 cadbe6ec9f81b2e306bc7e2de51f5480 261 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 232 4.3E-63 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02619 cadbe6ec9f81b2e306bc7e2de51f5480 261 Gene3D G3DSA:3.40.1160.10 4 258 4.1E-64 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_02619 cadbe6ec9f81b2e306bc7e2de51f5480 261 PIRSF PIRSF000728 1 261 3.5E-69 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VAA_02619 cadbe6ec9f81b2e306bc7e2de51f5480 261 SUPERFAMILY SSF53633 6 260 5.37E-58 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_00541 3959bd176b54655e2d0c0cefa8ae70f5 319 Pfam PF12849 PBP superfamily domain 32 290 2.4E-31 T 13-10-2018 IPR024370 PBP domain VAA_00541 3959bd176b54655e2d0c0cefa8ae70f5 319 Gene3D G3DSA:3.40.190.10 35 306 1.4E-99 T 13-10-2018 VAA_00541 3959bd176b54655e2d0c0cefa8ae70f5 319 Gene3D G3DSA:3.40.190.10 120 262 1.4E-99 T 13-10-2018 VAA_00541 3959bd176b54655e2d0c0cefa8ae70f5 319 SUPERFAMILY SSF53850 32 315 1.51E-66 T 13-10-2018 VAA_00541 3959bd176b54655e2d0c0cefa8ae70f5 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 18 304 4.2E-76 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 VAA_03153 46c573c29066f520d7c332538a12d88f 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 3.3E-8 T 13-10-2018 IPR011659 WD40-like Beta Propeller VAA_03153 46c573c29066f520d7c332538a12d88f 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 1.5E-7 T 13-10-2018 IPR011659 WD40-like Beta Propeller VAA_03153 46c573c29066f520d7c332538a12d88f 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 7.6E-15 T 13-10-2018 IPR011659 WD40-like Beta Propeller VAA_03153 46c573c29066f520d7c332538a12d88f 450 SUPERFAMILY SSF52964 29 181 1.44E-40 T 13-10-2018 VAA_03153 46c573c29066f520d7c332538a12d88f 450 SUPERFAMILY SSF69304 175 448 1.24E-57 T 13-10-2018 VAA_03153 46c573c29066f520d7c332538a12d88f 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 3.6E-169 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VAA_03153 46c573c29066f520d7c332538a12d88f 450 Gene3D G3DSA:2.120.10.30 185 450 2.0E-98 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAA_03153 46c573c29066f520d7c332538a12d88f 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.847 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VAA_03153 46c573c29066f520d7c332538a12d88f 450 Pfam PF04052 TolB amino-terminal domain 24 126 8.9E-36 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VAA_03153 46c573c29066f520d7c332538a12d88f 450 Gene3D G3DSA:3.40.50.10070 23 183 2.6E-49 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VAA_00618 21d119152e3688a8ba016f7c0716961b 207 SMART SM00072 3 187 3.8E-72 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VAA_00618 21d119152e3688a8ba016f7c0716961b 207 Pfam PF00625 Guanylate kinase 5 185 3.2E-60 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VAA_00618 21d119152e3688a8ba016f7c0716961b 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.285 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VAA_00618 21d119152e3688a8ba016f7c0716961b 207 Gene3D G3DSA:3.40.50.300 8 183 7.0E-74 T 13-10-2018 VAA_00618 21d119152e3688a8ba016f7c0716961b 207 Gene3D G3DSA:3.30.63.10 37 96 7.0E-74 T 13-10-2018 VAA_00618 21d119152e3688a8ba016f7c0716961b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VAA_00618 21d119152e3688a8ba016f7c0716961b 207 SUPERFAMILY SSF52540 3 189 1.75E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00618 21d119152e3688a8ba016f7c0716961b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.1E-75 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.8E-59 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 4.6E-55 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 SMART SM01374 1 123 3.3E-86 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 Gene3D G3DSA:2.40.150.20 1 123 8.1E-57 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 SUPERFAMILY SSF50193 2 122 9.42E-52 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02680 cfffd358fed4b796e261a7a427e9034b 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.668 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VAA_02435 49b932d8af61020700134f8a40a7f8f2 263 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 99 250 2.9E-55 T 13-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system VAA_02435 49b932d8af61020700134f8a40a7f8f2 263 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 1 97 4.8E-33 T 13-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain VAA_02053 e5f838e7d24fd103d862f18aec368517 113 Gene3D G3DSA:3.40.190.10 2 39 1.9E-21 T 13-10-2018 VAA_02053 e5f838e7d24fd103d862f18aec368517 113 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 6 110 6.8E-10 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VAA_02053 e5f838e7d24fd103d862f18aec368517 113 Gene3D G3DSA:3.40.190.150 40 104 1.9E-21 T 13-10-2018 VAA_01698 93244215da58a932e7ce5ed7b9ffdbf8 69 SMART SM00530 12 67 2.1E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01698 93244215da58a932e7ce5ed7b9ffdbf8 69 Pfam PF01381 Helix-turn-helix 13 67 2.9E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_01698 93244215da58a932e7ce5ed7b9ffdbf8 69 Gene3D G3DSA:1.10.260.40 1 69 8.2E-21 T 13-10-2018 VAA_01698 93244215da58a932e7ce5ed7b9ffdbf8 69 SUPERFAMILY SSF47413 7 68 6.97E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 Gene3D G3DSA:3.30.70.920 61 143 2.8E-31 T 13-10-2018 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 6.1E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 6.1E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 6.1E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 SMART SM00344 9 116 1.5E-41 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 Pfam PF01037 Lrp/AsnC ligand binding domain 76 146 1.0E-16 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 8.9E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 SUPERFAMILY SSF46785 8 69 5.7E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 SUPERFAMILY SSF54909 70 155 4.96E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_00549 b25469bcb798a883adedfbe1ef7ca22a 155 Gene3D G3DSA:1.10.10.10 5 60 1.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03717 6008b333c507f9549614e14587a5c5bc 399 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03717 6008b333c507f9549614e14587a5c5bc 399 Pfam PF01098 Cell cycle protein 26 381 1.9E-114 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03717 6008b333c507f9549614e14587a5c5bc 399 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 6.1E-130 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_03717 6008b333c507f9549614e14587a5c5bc 399 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 389 41.317 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VAA_01028 844b7ab6e812aa1e39222580595acf21 184 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 7 172 3.0E-77 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 VAA_01028 844b7ab6e812aa1e39222580595acf21 184 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 3 182 4.9E-104 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 VAA_01028 844b7ab6e812aa1e39222580595acf21 184 PIRSF PIRSF038321 3 183 2.2E-90 T 13-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 VAA_00367 e3f0756a4951bf7a03f50367a462e995 143 Pfam PF00303 Thymidylate synthase 2 111 4.5E-23 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00367 e3f0756a4951bf7a03f50367a462e995 143 Gene3D G3DSA:3.30.572.10 1 114 6.7E-30 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_00367 e3f0756a4951bf7a03f50367a462e995 143 SUPERFAMILY SSF55831 2 112 3.27E-32 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 SUPERFAMILY SSF55103 276 528 1.8E-56 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Gene3D G3DSA:3.30.70.2740 399 482 5.3E-8 T 13-10-2018 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 SUPERFAMILY SSF46548 508 633 9.24E-22 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Pfam PF02754 Cysteine-rich domain 715 786 0.0014 T 13-10-2018 IPR004017 Cysteine-rich domain VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 SUPERFAMILY SSF56176 13 269 3.31E-56 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Pfam PF13183 4Fe-4S dicluster domain 545 617 4.3E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Gene3D G3DSA:1.10.1060.10 523 640 1.1E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Gene3D G3DSA:3.30.70.2190 274 390 6.7E-5 T 13-10-2018 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Gene3D G3DSA:1.10.45.10 485 522 9.9E-6 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Pfam PF02913 FAD linked oxidases, C-terminal domain 273 521 1.1E-61 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Pfam PF01565 FAD binding domain 48 184 7.0E-30 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 Gene3D G3DSA:3.30.43.10 2 97 6.6E-9 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VAA_01323 d6e1b97ece0b68d5232a1ce218b3b3a4 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 547 558 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_01850 4f2554b771cd2c2f099c714d51bef31d 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 466 3.4E-228 T 13-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VAA_01850 4f2554b771cd2c2f099c714d51bef31d 477 SUPERFAMILY SSF81442 13 467 3.79E-121 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_01850 4f2554b771cd2c2f099c714d51bef31d 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_01850 4f2554b771cd2c2f099c714d51bef31d 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 4.4E-114 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_01850 4f2554b771cd2c2f099c714d51bef31d 477 Gene3D G3DSA:1.20.210.10 6 473 8.9E-205 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 Pfam PF02203 Tar ligand binding domain homologue 1 174 3.1E-36 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 SMART SM00283 265 498 2.6E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 SUPERFAMILY SSF58104 232 499 1.23E-65 T 13-10-2018 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 Gene3D G3DSA:1.10.287.950 212 500 1.9E-76 T 13-10-2018 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 SMART SM00304 212 264 2.0E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 356 383 5.9E-32 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 5.9E-32 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 5.9E-32 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 5.9E-32 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VAA_01415 b978728ff6093daf8b21c95b0c282b74 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 484 2.6E-32 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02847 a87ffa6dd5c4ed589796875c06e1f344 1181 SUPERFAMILY SSF52540 123 316 1.82E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02847 a87ffa6dd5c4ed589796875c06e1f344 1181 Pfam PF06761 Intracellular multiplication and human macrophage-killing 512 824 6.2E-76 T 13-10-2018 IPR009612 ImcF-related VAA_02847 a87ffa6dd5c4ed589796875c06e1f344 1181 Pfam PF06744 Type VI secretion protein IcmF C-terminal 931 1129 2.0E-57 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VAA_02847 a87ffa6dd5c4ed589796875c06e1f344 1181 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1177 0.0 T 13-10-2018 IPR017731 Type VI secretion system, IcmF VAA_02847 a87ffa6dd5c4ed589796875c06e1f344 1181 Pfam PF14331 ImcF-related N-terminal domain 203 458 4.3E-77 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain VAA_03071 2f216ce7ae1c7f3193d58f4caf469fa2 167 Gene3D G3DSA:3.30.2010.10 66 162 1.8E-6 T 13-10-2018 VAA_03071 2f216ce7ae1c7f3193d58f4caf469fa2 167 Pfam PF01863 Protein of unknown function DUF45 94 150 4.1E-11 T 13-10-2018 IPR002725 Protein of unknown function DUF45 VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 PRINTS PR00181 Maltose binding protein signature 364 383 3.8E-5 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 PRINTS PR00181 Maltose binding protein signature 135 154 3.8E-5 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 Gene3D G3DSA:3.40.190.10 144 397 2.5E-83 T 13-10-2018 VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 Pfam PF13416 Bacterial extracellular solute-binding protein 49 346 7.3E-29 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 SUPERFAMILY SSF53850 34 402 2.92E-65 T 13-10-2018 VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 138 155 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VAA_01041 136873b3c9c050b6a273f0e5f5e552a5 409 Gene3D G3DSA:3.40.190.10 44 364 2.5E-83 T 13-10-2018 VAA_01269 7b4b510e0b58c336c35d1be30e8d7536 108 SUPERFAMILY SSF51182 16 108 5.34E-33 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_01269 7b4b510e0b58c336c35d1be30e8d7536 108 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 16 108 24.62 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VAA_01269 7b4b510e0b58c336c35d1be30e8d7536 108 Gene3D G3DSA:2.60.120.10 15 108 3.7E-35 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01269 7b4b510e0b58c336c35d1be30e8d7536 108 Pfam PF06865 Protein of unknown function (DUF1255) 18 107 2.1E-34 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VAA_03199 003993f9c3f64e2454f5412697d8e5e7 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.957 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VAA_03199 003993f9c3f64e2454f5412697d8e5e7 335 SUPERFAMILY SSF52540 50 170 2.54E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03199 003993f9c3f64e2454f5412697d8e5e7 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 1.8E-95 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VAA_03199 003993f9c3f64e2454f5412697d8e5e7 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 322 4.6E-111 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 340 3.3E-5 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Gene3D G3DSA:1.10.150.20 174 232 5.1E-14 T 13-10-2018 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 SUPERFAMILY SSF100879 245 353 2.35E-20 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Gene3D G3DSA:2.30.40.20 15 72 9.6E-28 T 13-10-2018 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Pfam PF00817 impB/mucB/samB family 11 158 8.4E-47 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Gene3D G3DSA:3.30.1490.100 241 353 3.0E-24 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Gene3D G3DSA:3.30.70.270 73 173 9.2E-35 T 13-10-2018 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 SUPERFAMILY SSF56672 5 238 1.33E-90 T 13-10-2018 VAA_03607 7c08aa23eb4967f53a7135b7870afca5 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.188 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VAA_03527 fbe60bf30abcb5d28cf05dbb6bdd9c01 106 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 100 3.3E-24 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VAA_03527 fbe60bf30abcb5d28cf05dbb6bdd9c01 106 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 96 2.5E-17 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VAA_03527 fbe60bf30abcb5d28cf05dbb6bdd9c01 106 SUPERFAMILY SSF101498 2 99 5.62E-21 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 3.5E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 Pfam PF12019 Type II transport protein GspH 41 155 2.5E-11 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 SUPERFAMILY SSF54523 5 89 1.33E-13 T 13-10-2018 VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 PIRSF PIRSF024622 1 166 1.3E-56 T 13-10-2018 IPR016824 Tfp pilus assembly protein FimT VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 Gene3D G3DSA:3.30.700.10 5 145 2.1E-10 T 13-10-2018 VAA_01194 9c035bdae3e5a78ab01f2054db201733 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 8.6E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 Pfam PF08238 Sel1 repeat 137 169 0.17 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 Pfam PF08238 Sel1 repeat 196 206 50.0 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 Pfam PF08238 Sel1 repeat 79 94 1.6 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 Pfam PF08238 Sel1 repeat 209 242 7.8E-6 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 SMART SM00671 207 242 2.1E-6 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 SMART SM00671 135 170 0.72 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 SMART SM00671 171 206 170.0 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 SUPERFAMILY SSF81901 72 282 3.49E-28 T 13-10-2018 VAA_02897 253b4efadbbfed7f39cd0d538bcf7f1f 381 Gene3D G3DSA:1.25.40.10 62 283 6.1E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01562 2a0c588160c8b1fa3f9a447be9fe882e 463 PIRSF PIRSF002808 17 453 3.1E-100 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VAA_01562 2a0c588160c8b1fa3f9a447be9fe882e 463 SUPERFAMILY SSF103473 23 441 4.32E-61 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01562 2a0c588160c8b1fa3f9a447be9fe882e 463 Gene3D G3DSA:1.20.1250.20 25 225 3.3E-37 T 13-10-2018 VAA_01562 2a0c588160c8b1fa3f9a447be9fe882e 463 Pfam PF07690 Major Facilitator Superfamily 41 396 7.5E-40 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01562 2a0c588160c8b1fa3f9a447be9fe882e 463 Gene3D G3DSA:1.20.1250.20 247 448 5.5E-33 T 13-10-2018 VAA_00982 c41387908ccd1cd32c5229d54fd716d3 348 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 64 310 8.2E-51 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VAA_00982 c41387908ccd1cd32c5229d54fd716d3 348 Gene3D G3DSA:3.40.50.300 82 253 1.3E-46 T 13-10-2018 VAA_00982 c41387908ccd1cd32c5229d54fd716d3 348 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 31 317 31.973 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VAA_00982 c41387908ccd1cd32c5229d54fd716d3 348 Pfam PF03193 RsgA GTPase 79 253 6.7E-48 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VAA_00982 c41387908ccd1cd32c5229d54fd716d3 348 Gene3D G3DSA:1.10.40.50 255 327 6.5E-22 T 13-10-2018 VAA_00982 c41387908ccd1cd32c5229d54fd716d3 348 SUPERFAMILY SSF52540 98 314 2.99E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01669 220c1e72c13dad1fe11e226befd3e01a 119 Gene3D G3DSA:1.10.3680.10 36 115 9.5E-8 T 13-10-2018 IPR029024 TerB-like VAA_01669 220c1e72c13dad1fe11e226befd3e01a 119 Pfam PF05099 Tellurite resistance protein TerB 46 103 1.9E-6 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VAA_01669 220c1e72c13dad1fe11e226befd3e01a 119 SUPERFAMILY SSF158682 4 103 3.92E-14 T 13-10-2018 IPR029024 TerB-like VAA_00093 773347af77d898aebf289acf1f04ae48 78 SMART SM00360 2 75 7.2E-22 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VAA_00093 773347af77d898aebf289acf1f04ae48 78 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 9.1E-20 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VAA_00093 773347af77d898aebf289acf1f04ae48 78 SUPERFAMILY SSF54928 2 77 3.09E-23 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VAA_00093 773347af77d898aebf289acf1f04ae48 78 Gene3D G3DSA:3.30.70.330 1 78 6.0E-23 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAA_03508 ffeb111796e0c27a888912c76203e526 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 1.2E-53 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VAA_03508 ffeb111796e0c27a888912c76203e526 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.965 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VAA_03508 ffeb111796e0c27a888912c76203e526 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VAA_03508 ffeb111796e0c27a888912c76203e526 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.4E-69 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VAA_03508 ffeb111796e0c27a888912c76203e526 196 Gene3D G3DSA:3.40.50.1470 1 196 9.0E-76 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VAA_03508 ffeb111796e0c27a888912c76203e526 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VAA_03508 ffeb111796e0c27a888912c76203e526 196 SUPERFAMILY SSF53178 5 194 6.8E-70 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 Gene3D G3DSA:3.30.1360.40 76 157 8.3E-34 T 13-10-2018 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 PRINTS PR01467 Bacterial arginine repressor signature 26 39 2.1E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 PRINTS PR01467 Bacterial arginine repressor signature 91 104 2.1E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 PRINTS PR01467 Bacterial arginine repressor signature 43 58 2.1E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 PRINTS PR01467 Bacterial arginine repressor signature 122 137 2.1E-23 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 90 147 2.0E-21 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 Gene3D G3DSA:1.10.10.10 1 75 1.7E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 Pfam PF02863 Arginine repressor, C-terminal domain 83 148 4.5E-21 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 SUPERFAMILY SSF55252 83 152 4.19E-19 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 Hamap MF_00173 Arginine repressor [argR]. 1 156 57.887 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 152 2.3E-42 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 Pfam PF01316 Arginine repressor, DNA binding domain 8 75 1.9E-22 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VAA_01687 9aaa78371abfcdc266f45bafc64f71bd 157 SUPERFAMILY SSF46785 6 78 7.98E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01254 7797190b6255932ee23cb3ab8ed9049d 96 Pfam PF13616 PPIC-type PPIASE domain 17 93 2.5E-22 T 13-10-2018 VAA_01254 7797190b6255932ee23cb3ab8ed9049d 96 SUPERFAMILY SSF54534 11 94 7.85E-25 T 13-10-2018 VAA_01254 7797190b6255932ee23cb3ab8ed9049d 96 Gene3D G3DSA:3.10.50.40 6 96 1.8E-32 T 13-10-2018 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 Gene3D G3DSA:1.20.1220.12 430 551 4.7E-49 T 13-10-2018 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 41 550 2.8E-260 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 Pfam PF01274 Malate synthase 30 550 4.8E-198 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 PIRSF PIRSF001363 19 551 2.7E-249 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 ProSitePatterns PS00510 Malate synthase signature. 284 299 - T 13-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 SUPERFAMILY SSF51645 18 550 1.96E-187 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_00531 0f90a5f2b671cd3937e245941ed92f81 551 Gene3D G3DSA:3.20.20.360 20 429 1.4E-185 T 13-10-2018 VAA_02966 4377ffd2c5ce3975254076957dfa88c3 172 Gene3D G3DSA:2.60.40.420 54 171 6.5E-17 T 13-10-2018 IPR008972 Cupredoxin VAA_02966 4377ffd2c5ce3975254076957dfa88c3 172 SUPERFAMILY SSF49503 62 171 6.29E-21 T 13-10-2018 IPR008972 Cupredoxin VAA_02159 d9d06807cc98b3696fce5559dbc73a4d 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 9 247 8.0E-119 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VAA_02159 d9d06807cc98b3696fce5559dbc73a4d 247 SUPERFAMILY SSF53335 25 247 5.27E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02159 d9d06807cc98b3696fce5559dbc73a4d 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 8 247 42.962 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VAA_02159 d9d06807cc98b3696fce5559dbc73a4d 247 Pfam PF13649 Methyltransferase domain 65 163 2.1E-13 T 13-10-2018 VAA_02159 d9d06807cc98b3696fce5559dbc73a4d 247 PIRSF PIRSF006325 6 247 1.5E-125 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VAA_02159 d9d06807cc98b3696fce5559dbc73a4d 247 Gene3D G3DSA:3.40.50.150 23 247 6.2E-64 T 13-10-2018 VAA_03938 ecaeb62cbad638d74b355f9b7bf48033 273 Pfam PF00665 Integrase core domain 119 234 1.4E-32 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_03938 ecaeb62cbad638d74b355f9b7bf48033 273 Pfam PF13276 HTH-like domain 42 95 3.8E-8 T 13-10-2018 IPR025948 HTH-like domain VAA_03938 ecaeb62cbad638d74b355f9b7bf48033 273 Gene3D G3DSA:3.30.420.10 117 251 1.3E-16 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03938 ecaeb62cbad638d74b355f9b7bf48033 273 SUPERFAMILY SSF53098 113 272 2.78E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00998 022bae6472d06507116f3ded1fc35eef 126 Gene3D G3DSA:2.40.50.100 1 126 1.1E-49 T 13-10-2018 VAA_00998 022bae6472d06507116f3ded1fc35eef 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 5.4E-52 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VAA_00998 022bae6472d06507116f3ded1fc35eef 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 40.844 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VAA_00998 022bae6472d06507116f3ded1fc35eef 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 46 75 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VAA_00998 022bae6472d06507116f3ded1fc35eef 126 Pfam PF01597 Glycine cleavage H-protein 5 125 3.6E-50 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VAA_00998 022bae6472d06507116f3ded1fc35eef 126 SUPERFAMILY SSF51230 3 125 1.57E-44 T 13-10-2018 IPR011053 Single hybrid motif VAA_02712 90bff7b7b56a06b539007cba816353f9 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 231 1.5E-45 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 SUPERFAMILY SSF50447 243 324 4.2E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VAA_02712 90bff7b7b56a06b539007cba816353f9 476 Gene3D G3DSA:2.40.30.10 331 433 1.7E-26 T 13-10-2018 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VAA_02712 90bff7b7b56a06b539007cba816353f9 476 SUPERFAMILY SSF52540 19 235 1.06E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02712 90bff7b7b56a06b539007cba816353f9 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 1.2E-199 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 Gene3D G3DSA:3.40.50.300 5 239 2.2E-74 T 13-10-2018 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 Gene3D G3DSA:2.40.30.10 242 326 4.6E-27 T 13-10-2018 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.928 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VAA_02712 90bff7b7b56a06b539007cba816353f9 476 SUPERFAMILY SSF50465 332 434 2.73E-27 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VAA_02712 90bff7b7b56a06b539007cba816353f9 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 217 1.0E-13 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 SMART SM00244 22 180 3.3E-57 T 13-10-2018 IPR001107 Band 7 domain VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 SUPERFAMILY SSF117892 53 187 1.29E-41 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 Pfam PF01145 SPFH domain / Band 7 family 26 195 3.6E-33 T 13-10-2018 IPR001107 Band 7 domain VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 13-10-2018 IPR018080 Band 7/stomatin-like, conserved site VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 PRINTS PR00721 Stomatin signature 175 196 9.5E-29 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 PRINTS PR00721 Stomatin signature 132 155 9.5E-29 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 PRINTS PR00721 Stomatin signature 77 98 9.5E-29 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 PRINTS PR00721 Stomatin signature 112 129 9.5E-29 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 PRINTS PR00721 Stomatin signature 156 174 9.5E-29 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VAA_02118 17a7b723dbdff64709234bc60b430e4b 307 Gene3D G3DSA:3.30.479.30 50 182 7.4E-43 T 13-10-2018 VAA_00050 a1f80a3f6390a544d3eb3dfd8d45d01d 160 Gene3D G3DSA:3.40.630.30 16 150 1.2E-9 T 13-10-2018 VAA_00050 a1f80a3f6390a544d3eb3dfd8d45d01d 160 SUPERFAMILY SSF55729 12 143 3.16E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00050 a1f80a3f6390a544d3eb3dfd8d45d01d 160 Pfam PF13508 Acetyltransferase (GNAT) domain 63 128 1.7E-9 T 13-10-2018 IPR000182 GNAT domain VAA_00248 84c323f47581c993f87ba6597524d2b3 212 SUPERFAMILY SSF51735 1 210 5.06E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00248 84c323f47581c993f87ba6597524d2b3 212 Pfam PF13460 NAD(P)H-binding 7 197 9.9E-30 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_00248 84c323f47581c993f87ba6597524d2b3 212 Gene3D G3DSA:3.40.50.720 1 211 9.0E-48 T 13-10-2018 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 Pfam PF00196 Bacterial regulatory proteins, luxR family 210 263 4.5E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 SUPERFAMILY SSF46894 206 267 1.97E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 225 2.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 241 253 2.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 241 2.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 SMART SM00421 208 265 3.8E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_03006 b0b72ae81f2fef60483dc5e51f26ee31 272 Gene3D G3DSA:1.10.10.10 211 270 1.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00200 66367bd1c385101283991320bb396ba5 54 SUPERFAMILY SSF46955 1 53 4.94E-12 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_00200 66367bd1c385101283991320bb396ba5 54 Gene3D G3DSA:1.10.1660.10 2 53 1.5E-5 T 13-10-2018 VAA_00200 66367bd1c385101283991320bb396ba5 54 Pfam PF12728 Helix-turn-helix domain 6 53 5.1E-10 T 13-10-2018 VAA_02835 0b449aaaaa3fe1ef5589e94eb1102c35 145 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 144 7.4E-35 T 13-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VAA_02835 0b449aaaaa3fe1ef5589e94eb1102c35 145 Gene3D G3DSA:3.10.450.40 21 132 1.0E-7 T 13-10-2018 VAA_02835 0b449aaaaa3fe1ef5589e94eb1102c35 145 Pfam PF04965 Gene 25-like lysozyme 38 124 6.1E-14 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VAA_02835 0b449aaaaa3fe1ef5589e94eb1102c35 145 SUPERFAMILY SSF160719 35 138 8.24E-18 T 13-10-2018 VAA_03359 6feccc7744f300cfd3e4f4f772a89bbd 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.005 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VAA_03359 6feccc7744f300cfd3e4f4f772a89bbd 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.0E-96 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VAA_03594 f423a3e6bf452840a7579e7be21719e1 135 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 10 135 30.329 T 13-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VAA_03594 f423a3e6bf452840a7579e7be21719e1 135 Gene3D G3DSA:3.30.310.230 8 135 1.7E-44 T 13-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VAA_03594 f423a3e6bf452840a7579e7be21719e1 135 Pfam PF07417 Transcriptional regulator Crl 12 129 2.4E-49 T 13-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VAA_01052 bf388d1adce4d574b064ad1c53db8bba 192 PIRSF PIRSF000013 1 192 4.7E-92 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VAA_01052 bf388d1adce4d574b064ad1c53db8bba 192 SUPERFAMILY SSF48695 17 191 3.79E-54 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VAA_01052 bf388d1adce4d574b064ad1c53db8bba 192 Gene3D G3DSA:1.10.3820.10 11 188 1.1E-32 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VAA_01052 bf388d1adce4d574b064ad1c53db8bba 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 1.9E-69 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VAA_02086 dfa3e6cad0d339f7257adee361bee7b6 237 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 8 217 27.796 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VAA_02086 dfa3e6cad0d339f7257adee361bee7b6 237 PIRSF PIRSF006102 7 226 1.2E-76 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_02086 dfa3e6cad0d339f7257adee361bee7b6 237 Pfam PF02508 Rnf-Nqr subunit, membrane protein 13 207 2.0E-64 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_02086 dfa3e6cad0d339f7257adee361bee7b6 237 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 13 215 7.3E-86 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VAA_0986 61f841b34284a610c38724fed04fcfd9 276 Pfam PF03741 Integral membrane protein TerC family 16 203 4.6E-43 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VAA_02774 aaad35a880c3b39bff9921cf73b98018 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 2.4E-131 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VAA_02774 aaad35a880c3b39bff9921cf73b98018 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 2.3E-69 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VAA_00533 7171ee895b29a7e225701a67cf77f3eb 219 PIRSF PIRSF000239 13 218 3.7E-60 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAA_00533 7171ee895b29a7e225701a67cf77f3eb 219 Gene3D G3DSA:3.40.30.10 12 214 8.6E-72 T 13-10-2018 VAA_00533 7171ee895b29a7e225701a67cf77f3eb 219 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 176 208 1.8E-7 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAA_00533 7171ee895b29a7e225701a67cf77f3eb 219 SUPERFAMILY SSF52833 17 212 1.17E-66 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00533 7171ee895b29a7e225701a67cf77f3eb 219 Pfam PF00578 AhpC/TSA family 20 155 1.1E-33 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VAA_00569 ea5e711b39c79e8b995a3dc032f6af4c 514 Pfam PF02646 RmuC family 181 477 1.5E-103 T 13-10-2018 IPR003798 DNA recombination RmuC VAA_01035 d7141e6012760d90c90090f71072df15 118 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 114 8.9E-35 T 13-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 VAA_01035 d7141e6012760d90c90090f71072df15 118 SUPERFAMILY SSF141530 3 117 9.02E-34 T 13-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 VAA_01035 d7141e6012760d90c90090f71072df15 118 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 5 117 1.0E-22 T 13-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 VAA_01035 d7141e6012760d90c90090f71072df15 118 Gene3D G3DSA:2.40.33.40 1 118 6.1E-28 T 13-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 VAA_01863 e68a35b0a59e868c5cddf3d6cbba48f6 180 PIRSF PIRSF010252 1 175 9.5E-66 T 13-10-2018 IPR009809 Cell division protein ZapC VAA_01863 e68a35b0a59e868c5cddf3d6cbba48f6 180 Pfam PF07126 Cell-division protein ZapC 1 168 6.3E-63 T 13-10-2018 IPR009809 Cell division protein ZapC VAA_01863 e68a35b0a59e868c5cddf3d6cbba48f6 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 35.592 T 13-10-2018 IPR009809 Cell division protein ZapC VAA_03183 cb565a422008d41139254f4cae10fdbf 513 Pfam PF11840 Protein of unknown function (DUF3360) 9 513 2.9E-264 T 13-10-2018 IPR021794 Protein of unknown function DUF3360 VAA_01018 aff97d9c22dc75659896f642eb10a25e 405 Pfam PF02687 FtsX-like permease family 306 397 8.5E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_01018 aff97d9c22dc75659896f642eb10a25e 405 Pfam PF12704 MacB-like periplasmic core domain 19 227 3.4E-21 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VAA_00265 5ca55b833831041f28c3255dd947c533 153 Gene3D G3DSA:3.40.1550.10 1 153 2.0E-46 T 13-10-2018 IPR028976 CheC-like superfamily VAA_00265 5ca55b833831041f28c3255dd947c533 153 SUPERFAMILY SSF103039 1 153 3.14E-38 T 13-10-2018 IPR028976 CheC-like superfamily VAA_00265 5ca55b833831041f28c3255dd947c533 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 1.5E-22 T 13-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VAA_03573 f70ec470f8d68b2d5fc60bd6a4b87ebd 251 SUPERFAMILY SSF64005 10 234 2.35E-86 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VAA_03573 f70ec470f8d68b2d5fc60bd6a4b87ebd 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VAA_03573 f70ec470f8d68b2d5fc60bd6a4b87ebd 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 2.4E-93 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VAA_03573 f70ec470f8d68b2d5fc60bd6a4b87ebd 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.197 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VAA_03573 f70ec470f8d68b2d5fc60bd6a4b87ebd 251 Gene3D G3DSA:3.40.1180.10 1 239 4.7E-94 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VAA_03573 f70ec470f8d68b2d5fc60bd6a4b87ebd 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 3.6E-80 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VAA_02215 953f152a75e912d59cf4e4da94d5a14f 316 Gene3D G3DSA:1.10.3210.10 30 302 6.8E-38 T 13-10-2018 VAA_02215 953f152a75e912d59cf4e4da94d5a14f 316 SUPERFAMILY SSF109604 42 310 2.23E-37 T 13-10-2018 VAA_02215 953f152a75e912d59cf4e4da94d5a14f 316 Pfam PF08668 HDOD domain 49 245 3.4E-36 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VAA_00949 461cb29f90ce6f7baa2557aa1fc1fda4 165 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 32 130 1.8E-9 T 13-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VAA_00949 461cb29f90ce6f7baa2557aa1fc1fda4 165 SUPERFAMILY SSF52799 12 164 3.13E-35 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like VAA_00949 461cb29f90ce6f7baa2557aa1fc1fda4 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VAA_00949 461cb29f90ce6f7baa2557aa1fc1fda4 165 Gene3D G3DSA:3.90.190.10 5 165 4.3E-32 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like VAA_03566 fe6af66e6d94ba5d165648fa843f6583 160 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 18 159 36.511 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_03566 fe6af66e6d94ba5d165648fa843f6583 160 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 18 156 4.5E-59 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_03566 fe6af66e6d94ba5d165648fa843f6583 160 Pfam PF07977 FabA-like domain 27 151 1.7E-39 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VAA_03566 fe6af66e6d94ba5d165648fa843f6583 160 SUPERFAMILY SSF54637 17 156 6.26E-49 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03566 fe6af66e6d94ba5d165648fa843f6583 160 Gene3D G3DSA:3.10.129.10 10 160 1.2E-60 T 13-10-2018 VAA_03600 ca2bb2bc034ff882c95741ec2d596a25 146 Pfam PF05618 Putative ATP-dependant zinc protease 6 140 4.3E-45 T 13-10-2018 VAA_03600 ca2bb2bc034ff882c95741ec2d596a25 146 SUPERFAMILY SSF50630 6 140 6.75E-44 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VAA_03600 ca2bb2bc034ff882c95741ec2d596a25 146 Gene3D G3DSA:2.40.70.10 3 133 7.5E-33 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 SUPERFAMILY SSF48179 168 290 6.12E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 1.5E-35 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 Gene3D G3DSA:1.10.1040.10 167 296 7.5E-42 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 Gene3D G3DSA:3.40.50.720 1 166 1.8E-53 T 13-10-2018 VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 3.1E-28 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 5.1E-81 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VAA_03626 3b04c43ae06414e531c0b997fbaaa139 296 SUPERFAMILY SSF51735 1 166 2.63E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02950 f478a6511dc98a000164abefa5be4b09 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 5.2E-147 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAA_02950 f478a6511dc98a000164abefa5be4b09 442 PIRSF PIRSF004539 1 441 4.5E-182 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAA_02950 f478a6511dc98a000164abefa5be4b09 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 9.1E-145 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAA_03787 02f17e882fa3359de08286752d058ec2 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-28 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 VAA_03787 02f17e882fa3359de08286752d058ec2 68 Gene3D G3DSA:3.30.1910.10 1 63 2.2E-30 T 13-10-2018 VAA_03787 02f17e882fa3359de08286752d058ec2 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.2E-29 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 VAA_02152 443935f60ff8ad17353fac1a0e60eabb 276 SUPERFAMILY SSF51735 8 266 3.1E-21 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02152 443935f60ff8ad17353fac1a0e60eabb 276 Pfam PF13460 NAD(P)H-binding 9 172 3.6E-13 T 13-10-2018 IPR016040 NAD(P)-binding domain VAA_02152 443935f60ff8ad17353fac1a0e60eabb 276 Gene3D G3DSA:3.40.50.720 1 275 7.9E-43 T 13-10-2018 VAA_03941 902377eeee0c7121325555b5146eda4c 278 Gene3D G3DSA:3.30.420.10 112 273 6.8E-13 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03941 902377eeee0c7121325555b5146eda4c 278 Pfam PF13276 HTH-like domain 37 90 6.1E-8 T 13-10-2018 IPR025948 HTH-like domain VAA_03941 902377eeee0c7121325555b5146eda4c 278 Pfam PF00665 Integrase core domain 116 229 1.7E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_03941 902377eeee0c7121325555b5146eda4c 278 SUPERFAMILY SSF53098 107 270 1.14E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 SUPERFAMILY SSF50249 6 83 8.14E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.1E-37 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 Gene3D G3DSA:2.40.50.140 1 84 1.7E-38 T 13-10-2018 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 3.0E-38 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 Pfam PF00366 Ribosomal protein S17 10 77 4.1E-34 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02679 9e3699bb57582ba4f5ee8cf695ded7a0 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 24.828 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00117 0bce1aa25cd338eb50425601b875bbde 316 Gene3D G3DSA:3.40.50.300 13 293 2.1E-107 T 13-10-2018 VAA_00117 0bce1aa25cd338eb50425601b875bbde 316 Pfam PF01715 IPP transferase 43 288 5.0E-85 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VAA_00117 0bce1aa25cd338eb50425601b875bbde 316 Gene3D G3DSA:1.10.20.140 116 187 2.1E-107 T 13-10-2018 VAA_00117 0bce1aa25cd338eb50425601b875bbde 316 SUPERFAMILY SSF52540 11 154 1.28E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00117 0bce1aa25cd338eb50425601b875bbde 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 296 6.7E-116 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VAA_00117 0bce1aa25cd338eb50425601b875bbde 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 302 29.775 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VAA_00796 cc96764d4cf9628233d6d736bcdd5804 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 5.3E-20 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VAA_00796 cc96764d4cf9628233d6d736bcdd5804 98 SMART SM01103 3 86 8.8E-41 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VAA_00796 cc96764d4cf9628233d6d736bcdd5804 98 Gene3D G3DSA:3.30.110.60 1 98 1.6E-35 T 13-10-2018 IPR035920 YhbY-like superfamily VAA_00796 cc96764d4cf9628233d6d736bcdd5804 98 SUPERFAMILY SSF75471 1 93 9.55E-29 T 13-10-2018 IPR035920 YhbY-like superfamily VAA_00796 cc96764d4cf9628233d6d736bcdd5804 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 2.0E-43 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VAA_00796 cc96764d4cf9628233d6d736bcdd5804 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 4.6E-36 T 13-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VAA_02861 b01480999b7d399f1f7ddcb68b8526af 229 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 43 224 5.9E-53 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAA_02861 b01480999b7d399f1f7ddcb68b8526af 229 Hamap MF_00789 UPF0319 protein YccT [yccT]. 24 228 27.307 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAA_00125 dccd30d76d56bec36382b4c2f5b4106d 262 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 158 3.0E-33 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VAA_00125 dccd30d76d56bec36382b4c2f5b4106d 262 Gene3D G3DSA:3.10.50.40 147 255 1.9E-43 T 13-10-2018 VAA_00125 dccd30d76d56bec36382b4c2f5b4106d 262 Gene3D G3DSA:1.10.287.460 32 146 3.2E-30 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VAA_00125 dccd30d76d56bec36382b4c2f5b4106d 262 SUPERFAMILY SSF54534 48 254 5.64E-62 T 13-10-2018 VAA_00125 dccd30d76d56bec36382b4c2f5b4106d 262 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 252 1.9E-30 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAA_01078 e1d05a899c160d8749e039b6223a2301 370 Pfam PF00267 Gram-negative porin 29 370 1.1E-5 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VAA_01078 e1d05a899c160d8749e039b6223a2301 370 SUPERFAMILY SSF56935 27 370 1.63E-36 T 13-10-2018 VAA_01078 e1d05a899c160d8749e039b6223a2301 370 Gene3D G3DSA:2.40.160.10 24 370 1.2E-38 T 13-10-2018 IPR023614 Porin domain superfamily VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.891 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 PIRSF PIRSF000437 19 807 0.0 T 13-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 Pfam PF01553 Acyltransferase 289 424 1.7E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 SUPERFAMILY SSF69593 237 490 5.1E-27 T 13-10-2018 VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 PIRSF PIRSF500064 3 807 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VAA_00458 c83240d2558fa5eea491976f38ab16c8 807 SMART SM00563 300 427 1.4E-27 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_03269 3f7c755439e27f78e4e14c2e28b9c855 206 Pfam PF11659 Protein of unknown function (DUF3261) 52 196 5.4E-33 T 13-10-2018 IPR021675 Protein of unknown function DUF3261 VAA_00470 8537a06c387995a5c677ccc14d78ca78 477 Gene3D G3DSA:1.10.443.10 253 464 5.1E-24 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00470 8537a06c387995a5c677ccc14d78ca78 477 SUPERFAMILY SSF56349 240 458 1.38E-20 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00470 8537a06c387995a5c677ccc14d78ca78 477 Pfam PF00589 Phage integrase family 262 452 3.6E-11 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_02273 0db48c8fc87ebcd9a2fedd0db4096988 426 Gene3D G3DSA:3.50.50.60 1 274 2.6E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02273 0db48c8fc87ebcd9a2fedd0db4096988 426 SUPERFAMILY SSF51905 3 414 5.76E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02273 0db48c8fc87ebcd9a2fedd0db4096988 426 Pfam PF01593 Flavin containing amine oxidoreductase 12 304 2.2E-23 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VAA_01725 f556e9c3841e55567fba98f7c055247d 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 4.6E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01725 f556e9c3841e55567fba98f7c055247d 137 SUPERFAMILY SSF54523 11 120 6.98E-14 T 13-10-2018 VAA_01725 f556e9c3841e55567fba98f7c055247d 137 Gene3D G3DSA:3.30.700.10 11 136 1.3E-11 T 13-10-2018 VAA_01725 f556e9c3841e55567fba98f7c055247d 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 1.4E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 Pfam PF01584 CheW-like domain 21 160 1.0E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 SMART SM00260 17 158 1.0E-24 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 PIRSF PIRSF002867 1 312 1.7E-103 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 SUPERFAMILY SSF52172 183 310 4.41E-22 T 13-10-2018 IPR011006 CheY-like superfamily VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 Gene3D G3DSA:2.40.50.180 41 108 7.4E-27 T 13-10-2018 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 Gene3D G3DSA:3.40.50.2300 183 310 1.1E-22 T 13-10-2018 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 Gene3D G3DSA:2.30.30.40 24 142 7.4E-27 T 13-10-2018 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 SMART SM00448 184 305 1.7E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 Pfam PF00072 Response regulator receiver domain 186 303 1.4E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_03326 6a918c8f8fbe0a64d6c78b4896edc84c 314 SUPERFAMILY SSF50341 16 161 6.41E-33 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_01952 1c7fecb8f91370747e15ed680c238592 842 PIRSF PIRSF001444 1 842 0.0 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VAA_01952 1c7fecb8f91370747e15ed680c238592 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 8.0E-77 T 13-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VAA_01952 1c7fecb8f91370747e15ed680c238592 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 6.3E-255 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VAA_02407 4d576b6677e6b58c988f9d54ed406e45 404 Pfam PF00589 Phage integrase family 215 380 3.7E-8 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_02407 4d576b6677e6b58c988f9d54ed406e45 404 Gene3D G3DSA:1.10.443.10 184 394 1.2E-19 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_02407 4d576b6677e6b58c988f9d54ed406e45 404 SUPERFAMILY SSF56349 86 386 2.3E-17 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_01381 722f941e8d037e79e799e8c7d4e2db8c 243 SMART SM00062 22 242 5.4E-8 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01381 722f941e8d037e79e799e8c7d4e2db8c 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 241 4.2E-30 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01381 722f941e8d037e79e799e8c7d4e2db8c 243 SUPERFAMILY SSF53850 24 241 4.77E-41 T 13-10-2018 VAA_01381 722f941e8d037e79e799e8c7d4e2db8c 243 Gene3D G3DSA:3.40.190.10 104 198 1.3E-36 T 13-10-2018 VAA_01381 722f941e8d037e79e799e8c7d4e2db8c 243 Gene3D G3DSA:3.40.190.10 29 240 1.3E-36 T 13-10-2018 VAA_01294 f7c564d3c533b90cf6a65d116960974e 467 Pfam PF07670 Nucleoside recognition 153 247 4.5E-8 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAA_00767 228e9abb594ec5d1fa52d70ce23bcbdb 414 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 17 410 3.8E-206 T 13-10-2018 IPR019879 Ammonium transporter, marine subtype VAA_00767 228e9abb594ec5d1fa52d70ce23bcbdb 414 SUPERFAMILY SSF111352 17 388 3.01E-106 T 13-10-2018 VAA_00767 228e9abb594ec5d1fa52d70ce23bcbdb 414 ProSitePatterns PS01219 Ammonium transporters signature. 168 193 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VAA_00767 228e9abb594ec5d1fa52d70ce23bcbdb 414 Pfam PF00909 Ammonium Transporter Family 23 407 1.8E-100 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VAA_00767 228e9abb594ec5d1fa52d70ce23bcbdb 414 Gene3D G3DSA:1.10.3430.10 4 413 5.7E-119 T 13-10-2018 IPR029020 Ammonium/urea transporter VAA_04303 d137714705cfc62bb53f4e5207e573e8 131 SUPERFAMILY SSF117856 3 128 4.71E-34 T 13-10-2018 VAA_04303 d137714705cfc62bb53f4e5207e573e8 131 Pfam PF03479 Domain of unknown function (DUF296) 5 109 4.6E-22 T 13-10-2018 IPR005175 PPC domain VAA_04303 d137714705cfc62bb53f4e5207e573e8 131 Gene3D G3DSA:3.30.1330.80 1 130 1.5E-45 T 13-10-2018 VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 7.0E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 Pfam PF11612 Type II secretion system (T2SS), protein J 60 197 1.0E-38 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 Gene3D G3DSA:2.10.70.20 154 202 2.5E-18 T 13-10-2018 VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 199 3.4E-85 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 5.3E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 Gene3D G3DSA:3.10.610.10 39 152 3.2E-36 T 13-10-2018 VAA_00647 c1a1ed8e728929bc51c5650e98a3babd 217 SUPERFAMILY SSF54523 41 203 2.93E-54 T 13-10-2018 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 PIRSF PIRSF000521 33 431 1.5E-31 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 Gene3D G3DSA:3.90.1150.10 19 424 7.2E-170 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 Gene3D G3DSA:3.40.640.10 70 339 7.2E-170 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 SUPERFAMILY SSF53383 15 431 1.03E-133 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 22 430 4.7E-178 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 Pfam PF00202 Aminotransferase class-III 36 428 1.4E-127 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VAA_03231 6e9323b533525f3795dc1851ed0c41fd 441 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 8 433 48.92 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VAA_02172 25acec63f4aefc8007a2720dab14a366 195 Gene3D G3DSA:1.10.150.20 114 195 7.5E-23 T 13-10-2018 VAA_02172 25acec63f4aefc8007a2720dab14a366 195 PIRSF PIRSF028788 1 195 1.5E-45 T 13-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VAA_02172 25acec63f4aefc8007a2720dab14a366 195 SUPERFAMILY SSF159894 6 104 3.4E-30 T 13-10-2018 VAA_02172 25acec63f4aefc8007a2720dab14a366 195 Pfam PF04993 TfoX N-terminal domain 12 101 2.2E-28 T 13-10-2018 IPR007076 TfoX, N-terminal VAA_02172 25acec63f4aefc8007a2720dab14a366 195 Pfam PF04994 TfoX C-terminal domain 115 194 1.3E-30 T 13-10-2018 IPR007077 TfoX, C-terminal VAA_02172 25acec63f4aefc8007a2720dab14a366 195 Gene3D G3DSA:3.30.1460.30 1 105 6.0E-35 T 13-10-2018 VAA_04322 bb474ec6a75a0d3e1503ba70bff0e316 64 SUPERFAMILY SSF55120 7 61 4.11E-12 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VAA_04322 bb474ec6a75a0d3e1503ba70bff0e316 64 Gene3D G3DSA:3.30.70.1560 5 43 1.2E-16 T 13-10-2018 VAA_01072 58b8eb382d17cba647152ad0bd5a582b 184 TIGRFAM TIGR02249 integrase_gron: integron integrase 17 184 4.0E-81 T 13-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VAA_01072 58b8eb382d17cba647152ad0bd5a582b 184 Gene3D G3DSA:1.10.443.10 2 174 5.0E-52 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_01072 58b8eb382d17cba647152ad0bd5a582b 184 Pfam PF00589 Phage integrase family 15 171 7.0E-31 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_01072 58b8eb382d17cba647152ad0bd5a582b 184 SUPERFAMILY SSF56349 2 178 4.41E-31 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00837 0e9cfede34836794f8e1a2847a79c0c5 144 Pfam PF00258 Flavodoxin 4 132 4.6E-22 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VAA_00837 0e9cfede34836794f8e1a2847a79c0c5 144 SUPERFAMILY SSF52218 2 143 1.74E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00837 0e9cfede34836794f8e1a2847a79c0c5 144 Gene3D G3DSA:3.40.50.360 1 144 2.9E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_02001 98e8ab5ed26696ff3eb89a4d61abf9a9 158 Gene3D G3DSA:3.10.450.40 88 148 2.2E-8 T 13-10-2018 VAA_02047 f157fa1bbc5c74c68f9a31ca2b730f5c 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_02047 f157fa1bbc5c74c68f9a31ca2b730f5c 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 2.6E-34 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_02047 f157fa1bbc5c74c68f9a31ca2b730f5c 122 Gene3D G3DSA:1.10.3830.10 3 122 1.4E-40 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_03625 0594faccbe71be16b02cfe523fc90952 263 Gene3D G3DSA:2.40.230.20 23 263 1.7E-79 T 13-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VAA_03625 0594faccbe71be16b02cfe523fc90952 263 SUPERFAMILY SSF111364 30 263 6.02E-85 T 13-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VAA_03625 0594faccbe71be16b02cfe523fc90952 263 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 263 1.5E-104 T 13-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VAA_03419 a4da491ef6142ec61dcaa77d928df522 252 Pfam PF08907 Domain of unknown function (DUF1853) 45 217 3.6E-37 T 13-10-2018 IPR015003 Protein of unknown function DUF1853 VAA_03491 3502dde3c9e5cd3f0484b86f59240fcc 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 6.9E-46 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VAA_03491 3502dde3c9e5cd3f0484b86f59240fcc 116 SUPERFAMILY SSF52833 2 116 1.6E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03491 3502dde3c9e5cd3f0484b86f59240fcc 116 Pfam PF03960 ArsC family 6 115 7.3E-22 T 13-10-2018 IPR006660 Arsenate reductase-like VAA_03491 3502dde3c9e5cd3f0484b86f59240fcc 116 Gene3D G3DSA:3.40.30.10 1 116 2.6E-48 T 13-10-2018 VAA_00670 c5e8e848d2ea96292847f73575165c65 334 Gene3D G3DSA:3.20.20.140 1 332 1.4E-95 T 13-10-2018 VAA_00670 c5e8e848d2ea96292847f73575165c65 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.168 T 13-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VAA_00670 c5e8e848d2ea96292847f73575165c65 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 8.3E-120 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VAA_00670 c5e8e848d2ea96292847f73575165c65 334 SUPERFAMILY SSF51556 4 329 2.08E-74 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_00670 c5e8e848d2ea96292847f73575165c65 334 Pfam PF00962 Adenosine/AMP deaminase 5 326 1.4E-89 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VAA_00775 7bffd367e868c665f3fe4a2dfd4d098a 575 Pfam PF00759 Glycosyl hydrolase family 9 98 503 3.2E-21 T 13-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VAA_00775 7bffd367e868c665f3fe4a2dfd4d098a 575 Gene3D G3DSA:2.60.40.10 1 93 1.6E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_00775 7bffd367e868c665f3fe4a2dfd4d098a 575 SUPERFAMILY SSF48208 78 561 1.47E-86 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAA_00775 7bffd367e868c665f3fe4a2dfd4d098a 575 SUPERFAMILY SSF81296 2 90 1.61E-14 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_00775 7bffd367e868c665f3fe4a2dfd4d098a 575 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 3.3E-11 T 13-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VAA_00775 7bffd367e868c665f3fe4a2dfd4d098a 575 Gene3D G3DSA:1.50.10.10 94 574 1.8E-223 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VAA_03532 6b3c704903a638c280c66c5a8b3910e2 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 8.8E-24 T 13-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VAA_03532 6b3c704903a638c280c66c5a8b3910e2 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 1.1E-28 T 13-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VAA_03532 6b3c704903a638c280c66c5a8b3910e2 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.5E-42 T 13-10-2018 IPR032386 Flagellar assembly protein T, middle domain VAA_03532 6b3c704903a638c280c66c5a8b3910e2 377 Gene3D G3DSA:3.40.50.10610 114 290 5.8E-55 T 13-10-2018 VAA_03532 6b3c704903a638c280c66c5a8b3910e2 377 Gene3D G3DSA:3.30.1660.40 24 113 1.0E-35 T 13-10-2018 IPR038180 FlgT, N-terminal domain superfamily VAA_03532 6b3c704903a638c280c66c5a8b3910e2 377 Gene3D G3DSA:2.40.10.410 291 377 4.6E-36 T 13-10-2018 IPR038165 FlgT, C-terminal domain superfamily VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.3E-7 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.3E-7 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.3E-7 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-7 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Gene3D G3DSA:3.40.50.880 6 201 3.2E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_00500 7283111cb54125efc66dff19f581eb3a 517 SUPERFAMILY SSF52402 189 412 1.48E-60 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.322 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 SUPERFAMILY SSF52317 9 200 2.45E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VAA_00500 7283111cb54125efc66dff19f581eb3a 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 3.0E-83 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Gene3D G3DSA:3.30.300.10 398 517 3.3E-51 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.8E-6 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.8E-6 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.8E-6 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 7.8E-156 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 SUPERFAMILY SSF54810 397 517 3.92E-51 T 13-10-2018 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Pfam PF00117 Glutamine amidotransferase class-I 12 192 1.7E-41 T 13-10-2018 IPR017926 Glutamine amidotransferase VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Pfam PF02540 NAD synthase 213 284 4.6E-8 T 13-10-2018 IPR022310 NAD/GMP synthase VAA_00500 7283111cb54125efc66dff19f581eb3a 517 Gene3D G3DSA:3.40.50.620 202 397 1.6E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_01995 47e4dc243a306cacc7aee1733665a505 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 421 1.5E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01995 47e4dc243a306cacc7aee1733665a505 458 Pfam PF01554 MatE 25 185 4.6E-26 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01995 47e4dc243a306cacc7aee1733665a505 458 Pfam PF01554 MatE 252 413 1.0E-17 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01995 47e4dc243a306cacc7aee1733665a505 458 PIRSF PIRSF006603 8 458 8.0E-66 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01865 865d894c57a5758d21f02f4e47ce99d3 691 SUPERFAMILY SSF51735 23 331 2.03E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_01865 865d894c57a5758d21f02f4e47ce99d3 691 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 1 680 0.0 T 13-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VAA_03228 bb29c8a1cc47de72536271485f816066 264 Gene3D G3DSA:3.40.50.300 1 256 4.9E-52 T 13-10-2018 VAA_03228 bb29c8a1cc47de72536271485f816066 264 SMART SM00382 31 226 8.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03228 bb29c8a1cc47de72536271485f816066 264 Pfam PF00005 ABC transporter 22 177 9.3E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VAA_03228 bb29c8a1cc47de72536271485f816066 264 SUPERFAMILY SSF52540 2 235 3.06E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03228 bb29c8a1cc47de72536271485f816066 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VAA_01614 05b285cdef4596fdc99075cc034d4627 119 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 28 116 1.9E-25 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAA_01614 05b285cdef4596fdc99075cc034d4627 119 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 1 21 5.8E-5 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VAA_01614 05b285cdef4596fdc99075cc034d4627 119 Gene3D G3DSA:3.10.50.40 1 119 6.1E-49 T 13-10-2018 VAA_01614 05b285cdef4596fdc99075cc034d4627 119 SUPERFAMILY SSF54534 2 118 1.96E-44 T 13-10-2018 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.9E-25 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.344 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00680 8962dbe716c915639c08fade83ea80e8 71 Pfam PF01165 Ribosomal protein S21 4 56 5.3E-23 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03226 7cfd19f199dfb9d32faaa7b9d61302b6 235 Gene3D G3DSA:3.40.50.300 10 231 2.8E-64 T 13-10-2018 VAA_03226 7cfd19f199dfb9d32faaa7b9d61302b6 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 217 27.891 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VAA_03226 7cfd19f199dfb9d32faaa7b9d61302b6 235 PIRSF PIRSF006755 8 233 3.6E-74 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VAA_03226 7cfd19f199dfb9d32faaa7b9d61302b6 235 SUPERFAMILY SSF52540 8 220 4.87E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03226 7cfd19f199dfb9d32faaa7b9d61302b6 235 Pfam PF13500 AAA domain 11 219 4.2E-34 T 13-10-2018 VAA_03226 7cfd19f199dfb9d32faaa7b9d61302b6 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 2.0E-50 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 Pfam PF13416 Bacterial extracellular solute-binding protein 48 315 7.7E-38 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 Gene3D G3DSA:3.40.190.10 37 316 3.9E-109 T 13-10-2018 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 Gene3D G3DSA:3.40.190.10 137 321 3.9E-109 T 13-10-2018 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 54 75 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 172 191 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 38 54 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 128 144 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 253 272 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 209 228 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 81 95 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 97 110 7.4E-71 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 SUPERFAMILY SSF53850 33 336 7.91E-86 T 13-10-2018 VAA_01832 43f0a260ac1c74d3b262121d9a94afb3 349 PIRSF PIRSF019574 6 349 3.7E-110 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01271 cc619f78b24d44c3b7d3d7e1f2faa4d3 350 Gene3D G3DSA:3.20.20.70 1 349 1.2E-165 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01271 cc619f78b24d44c3b7d3d7e1f2faa4d3 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.0E-168 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAA_01271 cc619f78b24d44c3b7d3d7e1f2faa4d3 350 SUPERFAMILY SSF51569 6 347 6.18E-139 T 13-10-2018 VAA_01271 cc619f78b24d44c3b7d3d7e1f2faa4d3 350 Pfam PF00793 DAHP synthetase I family 39 337 3.7E-106 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_01271 cc619f78b24d44c3b7d3d7e1f2faa4d3 350 PIRSF PIRSF001361 1 350 2.3E-162 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAA_03357 02e2fbc59712a1fdbe1388c494ef541d 481 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 1.5E-161 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VAA_03357 02e2fbc59712a1fdbe1388c494ef541d 481 Pfam PF03553 Na+/H+ antiporter family 161 453 1.3E-66 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAA_02150 4200ceb530c0585a50a377308316fc33 147 Pfam PF05232 Chlorhexidine efflux transporter 75 137 2.7E-24 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter VAA_02150 4200ceb530c0585a50a377308316fc33 147 Pfam PF05232 Chlorhexidine efflux transporter 8 69 8.8E-24 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 6.8E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 SMART SM00421 156 213 6.5E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 Gene3D G3DSA:3.40.50.2300 1 180 2.8E-54 T 13-10-2018 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 Gene3D G3DSA:3.40.50.2300 181 223 1.6E-13 T 13-10-2018 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 SUPERFAMILY SSF46894 149 215 1.12E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.1E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.1E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.1E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_01253 6aaeb28215eb426008ec9cd986b90265 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VAA_00924 4ddefb7d4d1538e66ad5f07c793a11c8 322 SMART SM00327 84 285 1.4E-19 T 13-10-2018 IPR002035 von Willebrand factor, type A VAA_00924 4ddefb7d4d1538e66ad5f07c793a11c8 322 Pfam PF00092 von Willebrand factor type A domain 86 278 1.9E-32 T 13-10-2018 IPR002035 von Willebrand factor, type A VAA_00924 4ddefb7d4d1538e66ad5f07c793a11c8 322 Gene3D G3DSA:3.40.50.410 83 285 6.5E-59 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAA_00924 4ddefb7d4d1538e66ad5f07c793a11c8 322 SUPERFAMILY SSF53300 82 281 1.02E-38 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAA_01189 7676c4312660a62f245703fc56140169 178 Pfam PF03806 AbgT putative transporter family 1 176 3.6E-76 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VAA_01498 42437055c17edf166375a9ffbc68fcea 568 Pfam PF09818 Predicted ATPase of the ABC class 20 449 3.5E-183 T 13-10-2018 IPR019195 ABC transporter, ATPase, putative VAA_01498 42437055c17edf166375a9ffbc68fcea 568 SUPERFAMILY SSF52540 246 428 1.2E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01517 d04d66e7628f84a53e05136ace976f3f 481 SMART SM00327 320 479 2.7E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A VAA_01517 d04d66e7628f84a53e05136ace976f3f 481 Gene3D G3DSA:3.40.50.410 322 465 1.3E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAA_01517 d04d66e7628f84a53e05136ace976f3f 481 SUPERFAMILY SSF53300 317 475 1.24E-26 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VAA_01517 d04d66e7628f84a53e05136ace976f3f 481 Pfam PF05762 VWA domain containing CoxE-like protein 319 447 1.5E-10 T 13-10-2018 IPR008912 Uncharacterised protein family CoxE-like VAA_00450 5b2b3f3cd37db24a6b4bc5faa9f652f9 322 PIRSF PIRSF003097 23 318 2.8E-63 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VAA_02629 1a5106699f63843de79ee13fdd37e97f 200 Pfam PF05137 Fimbrial assembly protein (PilN) 102 177 2.0E-13 T 13-10-2018 IPR007813 Fimbrial assembly PilN VAA_02123 88cc08dc6a71f83aaca8109f12ce20d9 72 Pfam PF00563 EAL domain 11 63 4.6E-10 T 13-10-2018 IPR001633 EAL domain VAA_02123 88cc08dc6a71f83aaca8109f12ce20d9 72 SUPERFAMILY SSF141868 4 70 1.44E-13 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02123 88cc08dc6a71f83aaca8109f12ce20d9 72 Gene3D G3DSA:3.20.20.450 3 72 8.5E-12 T 13-10-2018 IPR035919 EAL domain superfamily VAA_03675 d702f186c0340bc50a8b01de3d6f44ca 213 Pfam PF03883 Peroxide stress protein YaaA 1 205 3.4E-70 T 13-10-2018 IPR005583 Peroxide stress protein YaaA VAA_03675 d702f186c0340bc50a8b01de3d6f44ca 213 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 213 24.591 T 13-10-2018 IPR005583 Peroxide stress protein YaaA VAA_00701 1db4080cab15fd146094fc609d4aa300 287 SUPERFAMILY SSF161098 14 265 3.66E-55 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00701 1db4080cab15fd146094fc609d4aa300 287 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 12 272 3.2E-102 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VAA_00701 1db4080cab15fd146094fc609d4aa300 287 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 273 9.9E-127 T 13-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 VAA_00701 1db4080cab15fd146094fc609d4aa300 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 269 8.7E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_00701 1db4080cab15fd146094fc609d4aa300 287 Gene3D G3DSA:1.10.3720.10 17 276 7.7E-63 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02773 b710ffa7b7ab57034a09e721e0fb5088 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 1.8E-70 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VAA_02773 b710ffa7b7ab57034a09e721e0fb5088 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 1.5E-117 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VAA_03885 2ebb02a7ddba88359946acde1979cc19 307 Pfam PF05045 Rhamnan synthesis protein F 77 216 1.1E-6 T 13-10-2018 IPR007739 Rhamnan synthesis F VAA_00587 6c8dbbe30cc4f57a3c018a37ec6a004d 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.8E-27 T 13-10-2018 IPR007475 Membrane fusogenic activity VAA_01319 83b9ca6dbc8fdfef1e551d4bacee1bdc 416 Gene3D G3DSA:3.40.50.300 1 344 1.1E-25 T 13-10-2018 VAA_01319 83b9ca6dbc8fdfef1e551d4bacee1bdc 416 SMART SM00382 26 372 3.4E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01319 83b9ca6dbc8fdfef1e551d4bacee1bdc 416 SUPERFAMILY SSF52540 19 335 1.52E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01319 83b9ca6dbc8fdfef1e551d4bacee1bdc 416 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 123 313 3.3E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_03558 5ee9e7bf67fd5e476acbb634641c4dec 120 SUPERFAMILY SSF46626 31 119 1.03E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_03558 5ee9e7bf67fd5e476acbb634641c4dec 120 Pfam PF00034 Cytochrome c 49 120 2.8E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_03558 5ee9e7bf67fd5e476acbb634641c4dec 120 Gene3D G3DSA:1.10.760.10 38 120 3.1E-25 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.137 T 13-10-2018 IPR026593 Protein translocase subunit SecY VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 4.4E-96 T 13-10-2018 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 1.7E-133 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 Gene3D G3DSA:1.10.3370.10 10 430 1.9E-159 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 PIRSF PIRSF004557 10 442 1.5E-121 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 Pfam PF00344 SecY translocase 76 418 7.4E-117 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02690 7b5dffd175f32e200c4613e34feb9e4f 444 SUPERFAMILY SSF103491 15 425 1.57E-129 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_03161 e4326a5ea5eb91e36d1740595551ed1e 549 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 28 522 5.3E-178 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAA_03161 e4326a5ea5eb91e36d1740595551ed1e 549 PIRSF PIRSF006446 374 547 2.7E-33 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAA_03161 e4326a5ea5eb91e36d1740595551ed1e 549 PIRSF PIRSF006446 21 352 3.7E-116 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAA_02119 c225ea7d9466ff4d477b715db7cdcf71 155 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 150 1.7E-22 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain VAA_02119 c225ea7d9466ff4d477b715db7cdcf71 155 Gene3D G3DSA:2.40.50.140 82 155 1.4E-10 T 13-10-2018 VAA_01249 ee88264c8c175cd2f9a8073b729dcbe7 296 Gene3D G3DSA:1.10.3720.10 1 283 1.9E-73 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01249 ee88264c8c175cd2f9a8073b729dcbe7 296 SUPERFAMILY SSF161098 11 296 2.09E-68 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01249 ee88264c8c175cd2f9a8073b729dcbe7 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 1.8E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_03642 21c225b3f0d3034281ce9fccb9134ccc 394 Pfam PF05940 NnrS protein 16 388 2.5E-105 T 13-10-2018 IPR010266 NnrS VAA_02468 65d2caf2b7b1971aaa330dc41034f8fe 186 Gene3D G3DSA:2.160.10.10 1 170 3.9E-45 T 13-10-2018 VAA_02468 65d2caf2b7b1971aaa330dc41034f8fe 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 35 69 1.2E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VAA_02468 65d2caf2b7b1971aaa330dc41034f8fe 186 SUPERFAMILY SSF51161 12 175 2.36E-30 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VAA_03303 5721adfe611cd440bf7ca81bb4fe8357 100 SUPERFAMILY SSF46767 2 84 9.94E-25 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VAA_03303 5721adfe611cd440bf7ca81bb4fe8357 100 Gene3D G3DSA:1.10.10.10 1 100 6.2E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03303 5721adfe611cd440bf7ca81bb4fe8357 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.2E-23 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VAA_01318 f77a5916a4bbee28d61a01cbfd62f9d5 229 Gene3D G3DSA:3.30.40.60 12 100 4.1E-5 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 Gene3D G3DSA:3.30.390.30 367 490 2.8E-41 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 Gene3D G3DSA:1.10.287.990 52 122 1.4E-96 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 22 347 1.6E-41 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 Gene3D G3DSA:3.50.50.60 162 289 1.4E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PIRSF PIRSF000350 6 487 9.2E-61 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 297 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 327 334 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 385 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 454 474 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 54 69 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 189 214 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 447 1.9E-40 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 SUPERFAMILY SSF55424 369 487 8.42E-25 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 370 479 4.4E-16 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 Gene3D G3DSA:3.50.50.60 22 350 1.4E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02624 c4b4da2743080d344eed24b2999154fe 504 SUPERFAMILY SSF51905 16 386 4.82E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 23 42 4.0E-19 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 4.0E-19 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 298 4.0E-19 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 312 334 4.0E-19 T 13-10-2018 VAA_02624 c4b4da2743080d344eed24b2999154fe 504 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 189 207 4.0E-19 T 13-10-2018 VAA_01400 55db8ea88f0a77290fd5deb67f128312 180 SUPERFAMILY SSF55166 62 180 1.23E-34 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAA_01400 55db8ea88f0a77290fd5deb67f128312 180 Pfam PF05951 Bacterial protein of unknown function (DUF882) 31 179 1.2E-67 T 13-10-2018 IPR010275 Protein of unknown function DUF882 VAA_01400 55db8ea88f0a77290fd5deb67f128312 180 Gene3D G3DSA:3.30.1380.10 60 180 1.8E-12 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VAA_01400 55db8ea88f0a77290fd5deb67f128312 180 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 1.5E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VAA_02174 90cb39831bf699f4d79e6f16b8558258 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 13-10-2018 IPR001876 Zinc finger, RanBP2-type VAA_02174 90cb39831bf699f4d79e6f16b8558258 105 Pfam PF09413 Putative prokaryotic signal transducing protein 1 64 9.4E-6 T 13-10-2018 IPR018551 Domain of unknown function DUF2007 VAA_01405 09a609a2ce32de9b72605f9a8928ef1d 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 1.1E-138 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAA_01405 09a609a2ce32de9b72605f9a8928ef1d 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.1E-175 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VAA_01405 09a609a2ce32de9b72605f9a8928ef1d 525 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 13-10-2018 IPR018093 BCCT transporter, conserved site VAA_00189 37988c88aa83cdc64686aa77e19be525 300 Pfam PF03466 LysR substrate binding domain 88 293 4.0E-26 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_00189 37988c88aa83cdc64686aa77e19be525 300 Gene3D G3DSA:3.40.190.290 92 292 2.2E-33 T 13-10-2018 VAA_00189 37988c88aa83cdc64686aa77e19be525 300 SUPERFAMILY SSF46785 3 88 5.05E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00189 37988c88aa83cdc64686aa77e19be525 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.7E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00189 37988c88aa83cdc64686aa77e19be525 300 SUPERFAMILY SSF53850 89 296 4.16E-29 T 13-10-2018 VAA_00189 37988c88aa83cdc64686aa77e19be525 300 Gene3D G3DSA:1.10.10.10 3 91 1.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01366 28e6618233e653089f0ad7a596c7d5c2 248 Pfam PF09836 Putative DNA-binding domain 32 89 8.3E-6 T 13-10-2018 IPR018640 Putative DNA-binding domain, bacteria VAA_01366 28e6618233e653089f0ad7a596c7d5c2 248 Gene3D G3DSA:1.10.150.690 31 121 5.8E-10 T 13-10-2018 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 SMART SM00028 122 155 0.019 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 SMART SM00028 88 121 8.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 SMART SM00028 259 292 23.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 SMART SM00028 156 189 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 Gene3D G3DSA:1.25.40.10 47 315 7.1E-74 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 SUPERFAMILY SSF48452 56 306 1.58E-60 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00809 9d5be87597703e9aa9b57af2f2e38ed6 327 PIRSF PIRSF004654 20 315 1.1E-83 T 13-10-2018 IPR023605 Lipoprotein NlpI VAA_01211 321fb01926086d264396dd341bfc3b78 584 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 309 431 3.3E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VAA_01211 321fb01926086d264396dd341bfc3b78 584 Pfam PF13175 AAA ATPase domain 19 94 1.5E-9 T 13-10-2018 VAA_01211 321fb01926086d264396dd341bfc3b78 584 SMART SM00382 32 449 7.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01211 321fb01926086d264396dd341bfc3b78 584 SUPERFAMILY SSF52540 18 447 1.86E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01211 321fb01926086d264396dd341bfc3b78 584 Gene3D G3DSA:3.40.50.300 15 200 4.8E-10 T 13-10-2018 VAA_01211 321fb01926086d264396dd341bfc3b78 584 Gene3D G3DSA:3.40.50.300 290 456 5.1E-14 T 13-10-2018 VAA_00121 28dfc477057abdec557bf92b7a71e255 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.2E-134 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VAA_00121 28dfc477057abdec557bf92b7a71e255 326 PIRSF PIRSF005651 1 325 4.2E-94 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VAA_00121 28dfc477057abdec557bf92b7a71e255 326 SMART SM00244 18 218 1.9E-46 T 13-10-2018 IPR001107 Band 7 domain VAA_00121 28dfc477057abdec557bf92b7a71e255 326 SUPERFAMILY SSF117892 56 223 6.54E-23 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VAA_00121 28dfc477057abdec557bf92b7a71e255 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 2.1E-28 T 13-10-2018 IPR001107 Band 7 domain VAA_03922 ebfc05885094b49e74e11c6143d63bbb 118 Pfam PF06923 Glucitol operon activator protein (GutM) 7 111 1.2E-33 T 13-10-2018 IPR009693 Glucitol operon activator VAA_01158 30efd4d664bab794dad5533df999d5f2 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 3.0E-30 T 13-10-2018 IPR006696 Protein of unknown function DUF423 VAA_02900 94e411afa468440fa3a3904231aefd3a 202 Gene3D G3DSA:3.40.30.10 25 199 4.1E-36 T 13-10-2018 VAA_02900 94e411afa468440fa3a3904231aefd3a 202 Pfam PF02630 SCO1/SenC 28 177 1.1E-30 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VAA_02900 94e411afa468440fa3a3904231aefd3a 202 SUPERFAMILY SSF52833 43 197 4.86E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 SUPERFAMILY SSF143968 495 638 3.27E-34 T 13-10-2018 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 33 453 1.2E-161 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 494 588 2.7E-19 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 SUPERFAMILY SSF143968 345 485 5.23E-54 T 13-10-2018 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 SUPERFAMILY SSF50475 25 344 1.45E-121 T 13-10-2018 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 Gene3D G3DSA:3.40.1670.10 359 475 6.6E-47 T 13-10-2018 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 Gene3D G3DSA:3.40.1670.10 501 606 2.2E-23 T 13-10-2018 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 28 476 1.5E-164 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VAA_00611 94ad79aa3427a8c6265bb48eed5d9c90 640 Gene3D G3DSA:1.20.5.570 607 640 6.7E-15 T 13-10-2018 VAA_02322 5316e5f872111cf7800884af24d07eb2 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 397 1.3E-133 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VAA_02322 5316e5f872111cf7800884af24d07eb2 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 3.5E-23 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VAA_02322 5316e5f872111cf7800884af24d07eb2 401 Pfam PF07670 Nucleoside recognition 89 184 5.2E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VAA_02322 5316e5f872111cf7800884af24d07eb2 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 2.8E-71 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VAA_03145 24599027d2714678b1cd5bce2f62d30a 457 Pfam PF10117 McrBC 5-methylcytosine restriction system component 65 405 3.5E-100 T 13-10-2018 IPR019292 5-methylcytosine restriction system component VAA_02494 56df3beff846afb7f338835e76acaf2b 84 Pfam PF04138 GtrA-like protein 14 80 4.7E-6 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 VAA_00637 831f50bb290b81bb878793b325c36a78 56 SUPERFAMILY SSF53474 2 54 4.07E-10 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00637 831f50bb290b81bb878793b325c36a78 56 Gene3D G3DSA:3.40.50.1820 1 56 1.4E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02451 69d51255d00e2586e2531f5d363eac23 328 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 17 319 3.0E-116 T 13-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VAA_02451 69d51255d00e2586e2531f5d363eac23 328 PIRSF PIRSF026649 16 319 3.1E-85 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAA_02451 69d51255d00e2586e2531f5d363eac23 328 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 18 311 1.1E-73 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VAA_02451 69d51255d00e2586e2531f5d363eac23 328 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 10 316 48.835 T 13-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VAA_03007 842e0e9c54a87d9a66edcd11a0a525f7 564 SUPERFAMILY SSF52540 40 268 3.31E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03007 842e0e9c54a87d9a66edcd11a0a525f7 564 SUPERFAMILY SSF52540 48 455 3.91E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03007 842e0e9c54a87d9a66edcd11a0a525f7 564 SMART SM00382 45 243 0.0016 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_01396 b33cf5b4d822b91d931ac94107f03be3 460 PIRSF PIRSF028099 4 460 3.6E-186 T 13-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VAA_01396 b33cf5b4d822b91d931ac94107f03be3 460 SUPERFAMILY SSF46626 318 460 1.02E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_01396 b33cf5b4d822b91d931ac94107f03be3 460 Gene3D G3DSA:1.10.760.10 318 460 2.4E-10 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_01396 b33cf5b4d822b91d931ac94107f03be3 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 18 460 7.6E-143 T 13-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VAA_01311 54508731566b277b31288a9cb7242c83 418 SUPERFAMILY SSF51055 369 415 7.72E-13 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_01311 54508731566b277b31288a9cb7242c83 418 Gene3D G3DSA:2.10.10.20 375 418 2.3E-17 T 13-10-2018 VAA_01311 54508731566b277b31288a9cb7242c83 418 SMART SM00495 375 418 2.6E-9 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VAA_01311 54508731566b277b31288a9cb7242c83 418 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 53 241 1.5E-38 T 13-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VAA_01311 54508731566b277b31288a9cb7242c83 418 SUPERFAMILY SSF81296 53 244 7.98E-49 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_01311 54508731566b277b31288a9cb7242c83 418 Gene3D G3DSA:2.70.50.50 53 246 9.4E-65 T 13-10-2018 VAA_03964 6f10149d5ba7f762339ea0f2116a239d 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_01027 68a146d5e76a41b855f89a6fb3f7aaa7 131 SUPERFAMILY SSF47413 21 99 3.26E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01027 68a146d5e76a41b855f89a6fb3f7aaa7 131 Gene3D G3DSA:1.10.260.40 18 105 1.3E-11 T 13-10-2018 VAA_01541 dc2fa4b9a450e484b0a4c7e5615aa1d3 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.931 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VAA_01541 dc2fa4b9a450e484b0a4c7e5615aa1d3 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 2.0E-40 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VAA_01541 dc2fa4b9a450e484b0a4c7e5615aa1d3 105 Pfam PF04363 Protein of unknown function (DUF496) 2 92 8.5E-42 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VAA_01541 dc2fa4b9a450e484b0a4c7e5615aa1d3 105 PIRSF PIRSF028773 1 104 1.1E-45 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VAA_03156 29c993f539a09c7e456ab2e8432aa944 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 207 4.7E-42 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAA_03156 29c993f539a09c7e456ab2e8432aa944 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.688 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VAA_03156 29c993f539a09c7e456ab2e8432aa944 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 7.2E-93 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VAA_02944 b2318ed92d12d72d953916236bd4ff5a 253 Pfam PF17131 Outer membrane lipoprotein-sorting protein 70 247 1.0E-39 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VAA_02944 b2318ed92d12d72d953916236bd4ff5a 253 Gene3D G3DSA:2.50.20.10 20 247 8.7E-41 T 13-10-2018 VAA_02944 b2318ed92d12d72d953916236bd4ff5a 253 PIRSF PIRSF028205 1 250 6.6E-95 T 13-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VAA_00902 b331570c98401d576dbfd44ac8b35928 471 SUPERFAMILY SSF55021 398 461 1.22E-8 T 13-10-2018 VAA_00902 b331570c98401d576dbfd44ac8b35928 471 Gene3D G3DSA:3.40.1160.10 3 307 5.2E-54 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_00902 b331570c98401d576dbfd44ac8b35928 471 Pfam PF00696 Amino acid kinase family 4 293 1.3E-21 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VAA_00902 b331570c98401d576dbfd44ac8b35928 471 Gene3D G3DSA:3.30.2130.10 308 463 4.1E-8 T 13-10-2018 VAA_00902 b331570c98401d576dbfd44ac8b35928 471 SUPERFAMILY SSF53633 4 306 1.65E-52 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VAA_01659 0a1b8283caab8aee5839dfe9de03c503 185 Pfam PF02325 YGGT family 10 77 9.3E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 VAA_01659 0a1b8283caab8aee5839dfe9de03c503 185 Pfam PF02325 YGGT family 109 173 2.8E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 115 140 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 406 426 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 269 288 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 37 57 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 379 398 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 191 213 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 PRINTS PR00173 Glutamate-aspartate symporter signature 85 105 5.6E-28 T 13-10-2018 VAA_03095 379669239091a9823158a1a24a5994ed 465 Pfam PF00375 Sodium:dicarboxylate symporter family 42 451 2.2E-98 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAA_03095 379669239091a9823158a1a24a5994ed 465 Gene3D G3DSA:1.10.3860.10 29 464 1.4E-95 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_03095 379669239091a9823158a1a24a5994ed 465 SUPERFAMILY SSF118215 39 451 3.14E-90 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_00430 4f576bb848d004f3cfcd5fc88e15c3b4 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 1.0E-44 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase VAA_00430 4f576bb848d004f3cfcd5fc88e15c3b4 175 Pfam PF01931 Protein of unknown function DUF84 7 166 5.1E-59 T 13-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VAA_00430 4f576bb848d004f3cfcd5fc88e15c3b4 175 SUPERFAMILY SSF52972 2 171 2.4E-59 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_00430 4f576bb848d004f3cfcd5fc88e15c3b4 175 Gene3D G3DSA:3.90.950.10 1 174 4.9E-68 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_00430 4f576bb848d004f3cfcd5fc88e15c3b4 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.694 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 7.6E-18 T 13-10-2018 IPR022569 Ferredoxin, C-terminal VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 8.9E-12 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 8.9E-12 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 8.9E-12 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 SUPERFAMILY SSF54862 3 101 9.26E-24 T 13-10-2018 VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 Gene3D G3DSA:3.30.70.20 2 101 1.7E-26 T 13-10-2018 VAA_01632 0fdfbf3833847c11c8ba660a97a3ce1f 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 2.9E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VAA_02115 7aef67802a863b8783d59660311e3919 304 Gene3D G3DSA:3.40.50.720 2 303 2.5E-71 T 13-10-2018 VAA_02115 7aef67802a863b8783d59660311e3919 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.6E-16 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 VAA_02115 7aef67802a863b8783d59660311e3919 304 SUPERFAMILY SSF51735 1 301 1.15E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02115 7aef67802a863b8783d59660311e3919 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 2.7E-100 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 VAA_02115 7aef67802a863b8783d59660311e3919 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 1.4E-19 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 SUPERFAMILY SSF55486 219 465 9.52E-75 T 13-10-2018 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Gene3D G3DSA:1.10.1740.60 210 294 4.8E-40 T 13-10-2018 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 459 560 1.1E-33 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Gene3D G3DSA:2.60.40.1730 31 209 6.7E-72 T 13-10-2018 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 309 324 4.7E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 141 156 4.7E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 273 283 4.7E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 191 206 4.7E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 340 4.7E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Pfam PF01433 Peptidase family M1 domain 223 451 6.4E-58 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 563 883 1.6E-114 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Gene3D G3DSA:1.10.390.10 295 458 2.7E-65 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Gene3D G3DSA:2.60.40.1840 459 560 1.8E-36 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 Gene3D G3DSA:1.25.50.10 561 883 7.8E-114 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 SUPERFAMILY SSF63737 19 208 2.88E-46 T 13-10-2018 VAA_01868 86530fc830ab706f46c30a1e2310d3cd 884 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 28 882 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VAA_01921 008c4624e7220999fa8a448c3a229bc2 397 Pfam PF08308 PEGA domain 328 392 2.1E-22 T 13-10-2018 IPR013229 PEGA VAA_00526 37f4fe42055c53908abad53e6cab5acd 394 Pfam PF01702 Queuine tRNA-ribosyltransferase 146 381 2.8E-94 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAA_00526 37f4fe42055c53908abad53e6cab5acd 394 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 21 384 56.733 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAA_00526 37f4fe42055c53908abad53e6cab5acd 394 SUPERFAMILY SSF51713 20 384 5.23E-162 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAA_00526 37f4fe42055c53908abad53e6cab5acd 394 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 23 389 9.0E-186 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAA_00526 37f4fe42055c53908abad53e6cab5acd 394 Gene3D G3DSA:3.20.20.105 14 388 3.0E-171 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAA_00526 37f4fe42055c53908abad53e6cab5acd 394 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 23 388 8.8E-177 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VAA_02596 3186725c3875d05dde7d217493382143 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 3.5E-6 T 13-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VAA_02596 3186725c3875d05dde7d217493382143 115 Gene3D G3DSA:3.30.429.10 1 115 1.4E-33 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily VAA_02596 3186725c3875d05dde7d217493382143 115 SUPERFAMILY SSF55331 2 115 2.5E-34 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily VAA_02813 8c5c03b1d47cffa90256ae35a5eceb85 353 Gene3D G3DSA:3.40.190.10 139 323 8.7E-38 T 13-10-2018 VAA_02813 8c5c03b1d47cffa90256ae35a5eceb85 353 Pfam PF13343 Bacterial extracellular solute-binding protein 90 308 2.7E-34 T 13-10-2018 VAA_02813 8c5c03b1d47cffa90256ae35a5eceb85 353 Gene3D G3DSA:3.40.190.10 65 316 8.7E-38 T 13-10-2018 VAA_02813 8c5c03b1d47cffa90256ae35a5eceb85 353 SUPERFAMILY SSF53850 41 346 4.58E-46 T 13-10-2018 VAA_02421 a060a7ba85b21d84d0e697f07e89820f 482 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.8E-10 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_02421 a060a7ba85b21d84d0e697f07e89820f 482 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_02421 a060a7ba85b21d84d0e697f07e89820f 482 Gene3D G3DSA:3.30.1360.60 4 85 1.4E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_02421 a060a7ba85b21d84d0e697f07e89820f 482 Pfam PF02378 Phosphotransferase system, EIIC 128 409 7.6E-30 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_02421 a060a7ba85b21d84d0e697f07e89820f 482 SUPERFAMILY SSF55604 8 80 6.28E-18 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_02354 3fa12f120d09c363a820d11e88f45c04 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 1.9E-14 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VAA_02354 3fa12f120d09c363a820d11e88f45c04 181 Gene3D G3DSA:3.40.50.2020 1 181 5.4E-67 T 13-10-2018 VAA_02354 3fa12f120d09c363a820d11e88f45c04 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.03 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VAA_02354 3fa12f120d09c363a820d11e88f45c04 181 SUPERFAMILY SSF53271 12 178 1.99E-51 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VAA_02354 3fa12f120d09c363a820d11e88f45c04 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.7E-73 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VAA_01625 ceb3ba6dab99661ca9a96f2256e890b5 249 Gene3D G3DSA:3.40.50.720 4 249 7.2E-85 T 13-10-2018 VAA_01625 ceb3ba6dab99661ca9a96f2256e890b5 249 Pfam PF00899 ThiF family 12 246 1.9E-64 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAA_01625 ceb3ba6dab99661ca9a96f2256e890b5 249 SUPERFAMILY SSF69572 4 248 5.49E-83 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAA_01625 ceb3ba6dab99661ca9a96f2256e890b5 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 3.8E-127 T 13-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VAA_01374 e8c35d275643cb1e95762a1874fb5539 255 SUPERFAMILY SSF81324 21 206 2.07E-38 T 13-10-2018 VAA_01374 e8c35d275643cb1e95762a1874fb5539 255 Pfam PF07885 Ion channel 128 205 2.0E-19 T 13-10-2018 IPR013099 Potassium channel domain VAA_01374 e8c35d275643cb1e95762a1874fb5539 255 Gene3D G3DSA:1.10.287.70 14 206 4.0E-39 T 13-10-2018 VAA_02780 143b49abe97fe6ca21cf75177453c7fd 442 Pfam PF00589 Phage integrase family 213 370 5.7E-11 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_02780 143b49abe97fe6ca21cf75177453c7fd 442 Gene3D G3DSA:1.10.443.10 181 384 4.4E-22 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_02780 143b49abe97fe6ca21cf75177453c7fd 442 SUPERFAMILY SSF56349 71 376 2.33E-24 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 SMART SM00342 209 291 4.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 SUPERFAMILY SSF51182 50 214 2.67E-9 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 9.2E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 9.2E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 Gene3D G3DSA:1.10.10.60 189 294 2.7E-22 T 13-10-2018 VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 Pfam PF12833 Helix-turn-helix domain 215 293 9.5E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_01241 66e7fe02c3bd8d99c36178fa3a58d1ce 295 SUPERFAMILY SSF46689 246 293 1.75E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_00123 ad67ec16e98af975f37a62568d6888e6 82 Hamap MF_00715 Protein SlyX [slyX]. 15 82 17.052 T 13-10-2018 IPR007236 SlyX VAA_00123 ad67ec16e98af975f37a62568d6888e6 82 Pfam PF04102 SlyX 16 82 3.3E-23 T 13-10-2018 IPR007236 SlyX VAA_00123 ad67ec16e98af975f37a62568d6888e6 82 Gene3D G3DSA:1.20.5.300 3 58 1.5E-7 T 13-10-2018 VAA_03582 d7431eba182b10c6faaf6ece0696078b 167 SUPERFAMILY SSF101307 9 159 7.06E-48 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VAA_03582 d7431eba182b10c6faaf6ece0696078b 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 158 2.1E-51 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VAA_03582 d7431eba182b10c6faaf6ece0696078b 167 PIRSF PIRSF006162 6 166 3.2E-53 T 13-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VAA_00859 5c747a92cf5754cacd313eef41b4885f 84 SUPERFAMILY SSF64307 11 82 8.76E-24 T 13-10-2018 IPR036868 TusA-like domain superfamily VAA_00859 5c747a92cf5754cacd313eef41b4885f 84 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 5 83 27.998 T 13-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VAA_00859 5c747a92cf5754cacd313eef41b4885f 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 14 38 - T 13-10-2018 IPR001455 TusA-like domain VAA_00859 5c747a92cf5754cacd313eef41b4885f 84 Gene3D G3DSA:3.30.110.40 7 82 2.0E-26 T 13-10-2018 IPR036868 TusA-like domain superfamily VAA_00859 5c747a92cf5754cacd313eef41b4885f 84 Pfam PF01206 Sulfurtransferase TusA 14 81 5.2E-21 T 13-10-2018 IPR001455 TusA-like domain VAA_03390 c576f7959a6821c1663aa2b1afe3c159 295 Gene3D G3DSA:3.40.50.300 22 262 4.0E-58 T 13-10-2018 VAA_03390 c576f7959a6821c1663aa2b1afe3c159 295 PIRSF PIRSF003092 7 288 3.7E-84 T 13-10-2018 IPR025501 ATP binding protein MinD VAA_03390 c576f7959a6821c1663aa2b1afe3c159 295 SUPERFAMILY SSF52540 22 282 1.52E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03390 c576f7959a6821c1663aa2b1afe3c159 295 Pfam PF13614 AAA domain 22 181 3.7E-18 T 13-10-2018 IPR025669 AAA domain VAA_00416 16622dde26ff9098d0f5696518206f86 494 Pfam PF02554 Carbon starvation protein CstA 149 293 1.1E-19 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VAA_00416 16622dde26ff9098d0f5696518206f86 494 Pfam PF02554 Carbon starvation protein CstA 4 144 3.8E-34 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VAA_00416 16622dde26ff9098d0f5696518206f86 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 436 4.0E-21 T 13-10-2018 IPR025299 CstA, C-terminal domain VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 SUPERFAMILY SSF52788 10 160 2.35E-45 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 SMART SM00226 13 159 1.8E-39 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 131 146 3.9E-23 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 90 105 3.9E-23 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 15 32 3.9E-23 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 56 72 3.9E-23 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 Gene3D G3DSA:3.40.50.2300 13 166 1.2E-50 T 13-10-2018 VAA_01132 cc94fc3b777a5be1911d32a45fd8070c 175 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 15 154 7.0E-37 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VAA_02914 3f7503ecfa284368585b6311cff322b0 344 Pfam PF08349 Protein of unknown function (DUF1722) 219 335 2.4E-45 T 13-10-2018 IPR013560 Domain of unknown function DUF1722 VAA_02914 3f7503ecfa284368585b6311cff322b0 344 Pfam PF04463 Protein of unknown function (DUF523) 35 176 6.0E-38 T 13-10-2018 IPR007553 Domain of unknown function DUF523 VAA_02914 3f7503ecfa284368585b6311cff322b0 344 PIRSF PIRSF037004 26 344 1.2E-138 T 13-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 SUPERFAMILY SSF52283 1 136 1.44E-39 T 13-10-2018 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 3.6E-49 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 SUPERFAMILY SSF51735 103 299 2.63E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 Gene3D G3DSA:3.40.50.720 103 298 7.8E-131 T 13-10-2018 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 Gene3D G3DSA:3.40.50.720 4 318 7.8E-131 T 13-10-2018 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 328 5.4E-34 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAA_00959 da3daa1c541f630c3fa120d9a5755203 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_01455 4a2493746eeb03cd628aec2d07ab82ee 125 Pfam PF04320 Protein with unknown function (DUF469) 24 124 7.9E-33 T 13-10-2018 IPR007416 Protein of unknown function DUF469 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 Gene3D G3DSA:1.10.1060.10 17 152 1.8E-34 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 SUPERFAMILY SSF46548 12 163 8.37E-41 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 31 140 1.6E-38 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 1.2E-36 T 13-10-2018 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 1.2E-36 T 13-10-2018 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 PRINTS PR00419 Adrenodoxin reductase family signature 328 341 1.2E-36 T 13-10-2018 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 1.2E-36 T 13-10-2018 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 PRINTS PR00419 Adrenodoxin reductase family signature 294 308 1.2E-36 T 13-10-2018 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 463 7.4E-25 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 12 475 1.4E-250 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 Gene3D G3DSA:3.50.50.60 153 240 8.3E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 SUPERFAMILY SSF51971 151 405 1.29E-67 T 13-10-2018 VAA_03694 d9feae7fdaeffa7afb4da8d34330da21 476 Gene3D G3DSA:3.50.50.60 251 404 1.4E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03259 a042916ce8a11e752437f93c258652f5 86 SUPERFAMILY SSF47336 6 84 2.09E-13 T 13-10-2018 IPR036736 ACP-like superfamily VAA_03259 a042916ce8a11e752437f93c258652f5 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 7.2E-10 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VAA_03259 a042916ce8a11e752437f93c258652f5 86 Gene3D G3DSA:1.10.1200.10 4 86 2.8E-21 T 13-10-2018 IPR036736 ACP-like superfamily VAA_01332 cade00423c9655ef61e76aae8cb9ffa9 972 Gene3D G3DSA:3.40.720.10 389 664 2.0E-14 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_01332 cade00423c9655ef61e76aae8cb9ffa9 972 SUPERFAMILY SSF53649 393 663 7.85E-10 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_01332 cade00423c9655ef61e76aae8cb9ffa9 972 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 395 662 4.8E-12 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VAA_01760 96418fbe54772ea7e1cfc887320c411e 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 185 8.1E-37 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VAA_01760 96418fbe54772ea7e1cfc887320c411e 185 SUPERFAMILY SSF55821 3 181 2.26E-56 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VAA_01760 96418fbe54772ea7e1cfc887320c411e 185 Pfam PF01300 Telomere recombination 9 185 6.3E-49 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VAA_01760 96418fbe54772ea7e1cfc887320c411e 185 Gene3D G3DSA:3.90.870.10 2 183 2.1E-61 T 13-10-2018 VAA_01760 96418fbe54772ea7e1cfc887320c411e 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.988 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VAA_00897 16050ef7b60a85e9355a48f2586d6e1c 335 Gene3D G3DSA:3.40.190.10 29 330 4.0E-137 T 13-10-2018 VAA_00897 16050ef7b60a85e9355a48f2586d6e1c 335 SUPERFAMILY SSF53850 28 330 4.13E-88 T 13-10-2018 VAA_00897 16050ef7b60a85e9355a48f2586d6e1c 335 Gene3D G3DSA:3.40.190.100 117 258 4.0E-137 T 13-10-2018 VAA_00897 16050ef7b60a85e9355a48f2586d6e1c 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 317 1.1E-51 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VAA_01506 e32bac28eebc56305dddaed9c57f9dff 314 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 32 294 1.8E-85 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VAA_01506 e32bac28eebc56305dddaed9c57f9dff 314 Gene3D G3DSA:2.40.100.10 185 313 3.4E-43 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_01506 e32bac28eebc56305dddaed9c57f9dff 314 SUPERFAMILY SSF50891 200 297 1.71E-8 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VAA_01506 e32bac28eebc56305dddaed9c57f9dff 314 SMART SM00797 31 311 2.3E-129 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VAA_01506 e32bac28eebc56305dddaed9c57f9dff 314 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 298 5.7E-80 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VAA_03065 54fd7b13f9dfaed1954e97f02138b0dc 135 Gene3D G3DSA:3.40.50.300 14 135 1.0E-26 T 13-10-2018 VAA_03065 54fd7b13f9dfaed1954e97f02138b0dc 135 Pfam PF13671 AAA domain 16 114 7.8E-13 T 13-10-2018 VAA_03065 54fd7b13f9dfaed1954e97f02138b0dc 135 SUPERFAMILY SSF52540 15 133 1.42E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_01775 3ebc523e08691ed6f6ae3d5ba6ac96a7 222 Pfam PF03006 Haemolysin-III related 14 210 5.4E-39 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VAA_01775 3ebc523e08691ed6f6ae3d5ba6ac96a7 222 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 16 216 1.7E-69 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VAA_01257 4c1ad846f3f6214ee2c8bf4e2c90155f 125 SUPERFAMILY SSF142906 3 115 3.27E-35 T 13-10-2018 IPR038056 YjbR-like superfamily VAA_01257 4c1ad846f3f6214ee2c8bf4e2c90155f 125 Gene3D G3DSA:3.90.1150.30 1 122 3.6E-41 T 13-10-2018 IPR038056 YjbR-like superfamily VAA_01257 4c1ad846f3f6214ee2c8bf4e2c90155f 125 Pfam PF04237 YjbR 13 102 1.9E-25 T 13-10-2018 IPR007351 Uncharacterised protein YjbR VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 Hamap MF_01016 Putative transport protein YidE [yidE]. 7 558 54.878 T 13-10-2018 IPR023018 Transport protein YidE, putative VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 22 172 4.4E-37 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 385 539 2.9E-47 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 Pfam PF02080 TrkA-C domain 300 361 1.5E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 Gene3D G3DSA:3.30.70.1450 199 280 1.0E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 SUPERFAMILY SSF116726 210 277 3.4E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 SUPERFAMILY SSF116726 284 364 3.79E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.1E-42 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 Pfam PF06826 Predicted Permease Membrane Region 380 552 8.0E-47 T 13-10-2018 IPR006512 YidE/YbjL duplication VAA_03287 a74bf56e4ea89cb5729846dca864c745 558 Gene3D G3DSA:3.30.70.1450 294 370 4.9E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 227 5.0E-51 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 233 39.927 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 8 228 1.6E-59 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 SUPERFAMILY SSF51366 3 230 1.44E-75 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 SMART SM00934 7 228 5.8E-97 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VAA_02285 1de7214b813bb7f204a3cbe3394d4f0d 233 Gene3D G3DSA:3.20.20.70 1 233 7.2E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_03254 27d74c0dc9d804d9305fd5d4cee0d05d 414 Pfam PF01494 FAD binding domain 6 164 1.0E-14 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VAA_03254 27d74c0dc9d804d9305fd5d4cee0d05d 414 Gene3D G3DSA:3.50.50.60 2 414 2.7E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_03254 27d74c0dc9d804d9305fd5d4cee0d05d 414 SUPERFAMILY SSF51905 6 387 2.77E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 SUPERFAMILY SSF55298 8 135 4.71E-28 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 SUPERFAMILY SSF55298 148 271 2.2E-35 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 Gene3D G3DSA:3.30.1330.40 142 269 3.5E-36 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 Gene3D G3DSA:3.30.1330.40 4 135 4.0E-29 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 SUPERFAMILY SSF55298 287 408 1.3E-34 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 Gene3D G3DSA:3.30.1330.40 281 405 2.2E-34 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 Pfam PF01042 Endoribonuclease L-PSP 152 263 7.8E-27 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 Pfam PF01042 Endoribonuclease L-PSP 290 401 9.8E-27 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 Pfam PF01042 Endoribonuclease L-PSP 30 128 1.6E-20 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAA_02816 aeceea43a9f47ea10a60681b847ec003 411 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 148 263 5.4E-32 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VAA_00728 0b895f37ca4422ebcd5c6ac1e4ec53c4 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.7E-29 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAA_00728 0b895f37ca4422ebcd5c6ac1e4ec53c4 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.7E-29 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAA_00728 0b895f37ca4422ebcd5c6ac1e4ec53c4 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.7E-29 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAA_00728 0b895f37ca4422ebcd5c6ac1e4ec53c4 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.7E-29 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VAA_00728 0b895f37ca4422ebcd5c6ac1e4ec53c4 293 Pfam PF01478 Type IV leader peptidase family 135 244 5.5E-27 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VAA_00728 0b895f37ca4422ebcd5c6ac1e4ec53c4 293 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 7.0E-33 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal VAA_03021 3cbe15a59b205900c808515bb4ef2946 212 Gene3D G3DSA:1.10.510.10 87 208 1.7E-16 T 13-10-2018 VAA_03021 3cbe15a59b205900c808515bb4ef2946 212 SMART SM00220 8 196 0.0015 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VAA_03021 3cbe15a59b205900c808515bb4ef2946 212 Pfam PF00069 Protein kinase domain 43 182 1.1E-15 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VAA_03021 3cbe15a59b205900c808515bb4ef2946 212 SUPERFAMILY SSF56112 40 207 7.82E-21 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 SUPERFAMILY SSF81333 6 82 1.7E-19 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 Pfam PF00137 ATP synthase subunit C 14 76 1.6E-10 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 13 78 13.874 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 Gene3D G3DSA:1.20.20.10 5 81 1.4E-27 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 PRINTS PR00124 ATP synthase C subunit signature 36 51 1.9E-6 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 PRINTS PR00124 ATP synthase C subunit signature 53 78 1.9E-6 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 PRINTS PR00124 ATP synthase C subunit signature 15 34 1.9E-6 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VAA_00830 6bb0fe73f83d2b0d896b6eec60d798e2 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 23 80 1.4E-30 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VAA_02173 7c89a51b883fa4334d84eb8fa1205b85 230 Pfam PF09335 SNARE associated Golgi protein 69 185 2.5E-21 T 13-10-2018 IPR032816 SNARE associated Golgi protein VAA_03758 3ca0b6e10d4a22e5f432ade500f5416d 226 Gene3D G3DSA:1.20.58.220 1 225 7.3E-64 T 13-10-2018 IPR038078 PhoU-like domain superfamily VAA_03758 3ca0b6e10d4a22e5f432ade500f5416d 226 SUPERFAMILY SSF109755 28 216 1.12E-15 T 13-10-2018 VAA_03758 3ca0b6e10d4a22e5f432ade500f5416d 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 5.8E-67 T 13-10-2018 IPR002727 Protein of unknown function DUF47 VAA_03758 3ca0b6e10d4a22e5f432ade500f5416d 226 Pfam PF01865 Protein of unknown function DUF47 7 223 1.1E-64 T 13-10-2018 IPR018445 Putative phosphate transport regulator VAA_02951 1e5c6e5d721d9dc86b70c3ebb1b5d720 149 Pfam PF13673 Acetyltransferase (GNAT) domain 48 144 2.2E-9 T 13-10-2018 IPR000182 GNAT domain VAA_02951 1e5c6e5d721d9dc86b70c3ebb1b5d720 149 SUPERFAMILY SSF55729 1 135 1.8E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_02951 1e5c6e5d721d9dc86b70c3ebb1b5d720 149 Gene3D G3DSA:3.40.630.30 1 137 3.0E-15 T 13-10-2018 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.896 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 7.2E-133 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 Gene3D G3DSA:1.10.8.1080 226 304 7.7E-31 T 13-10-2018 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 Gene3D G3DSA:3.40.50.10490 8 225 2.7E-81 T 13-10-2018 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 Pfam PF01380 SIS domain 137 217 2.1E-10 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_00419 767dcde2cfb825c5b94fa8534076cc43 309 SUPERFAMILY SSF53697 12 256 2.02E-73 T 13-10-2018 VAA_01390 39ba799e823afe22e0cd43bd749089b9 171 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 10 163 1.8E-65 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like VAA_01390 39ba799e823afe22e0cd43bd749089b9 171 Pfam PF06228 Haem utilisation ChuX/HutX 26 163 5.1E-36 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like VAA_01390 39ba799e823afe22e0cd43bd749089b9 171 SUPERFAMILY SSF144064 1 166 2.09E-58 T 13-10-2018 VAA_01390 39ba799e823afe22e0cd43bd749089b9 171 Gene3D G3DSA:3.40.1570.10 1 170 4.7E-63 T 13-10-2018 VAA_01390 39ba799e823afe22e0cd43bd749089b9 171 PIRSF PIRSF030840 2 169 2.7E-64 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like VAA_00694 4686ce65ff88344840547a280050eff7 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.955 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VAA_00694 4686ce65ff88344840547a280050eff7 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VAA_00694 4686ce65ff88344840547a280050eff7 208 Gene3D G3DSA:3.40.50.150 1 206 1.5E-75 T 13-10-2018 VAA_00694 4686ce65ff88344840547a280050eff7 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 5.6E-72 T 13-10-2018 VAA_00694 4686ce65ff88344840547a280050eff7 208 SUPERFAMILY SSF53335 13 204 8.91E-46 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00694 4686ce65ff88344840547a280050eff7 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.2E-83 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 158 1.6E-44 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 198 1.6E-44 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 207 223 1.6E-44 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 264 281 1.6E-44 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 304 319 1.6E-44 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 191 348 2.9E-67 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 Gene3D G3DSA:3.40.50.720 40 362 1.0E-151 T 13-10-2018 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 39 138 3.8E-40 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 PIRSF PIRSF000149 37 367 9.4E-132 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 SUPERFAMILY SSF55347 185 348 8.42E-75 T 13-10-2018 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 SMART SM00846 39 186 1.5E-94 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 Gene3D G3DSA:3.30.360.10 185 350 1.0E-151 T 13-10-2018 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 SUPERFAMILY SSF51735 39 202 3.36E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 40 360 2.2E-134 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_02344 777d93f2c0b7e584cb428885432de5fa 367 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 184 191 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 Pfam PF01022 Bacterial regulatory protein, arsR family 34 79 7.2E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 SMART SM00418 27 105 1.2E-18 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 4.6E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 4.6E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 4.6E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 SUPERFAMILY SSF46785 18 108 2.06E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01591 08935d3dcc8321a86458d64c11bbb836 109 Gene3D G3DSA:1.10.10.10 13 109 4.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00857 9df996d472276a811efa2e51be4a7abe 91 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 7.9E-22 T 13-10-2018 IPR001727 Gdt1 family VAA_00740 b32e55bc05de185899418a4f96901add 891 Gene3D G3DSA:3.40.50.970 472 705 2.6E-111 T 13-10-2018 VAA_00740 b32e55bc05de185899418a4f96901add 891 SUPERFAMILY SSF52922 701 890 8.16E-56 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_00740 b32e55bc05de185899418a4f96901add 891 Gene3D G3DSA:3.40.50.970 55 471 3.0E-132 T 13-10-2018 VAA_00740 b32e55bc05de185899418a4f96901add 891 SUPERFAMILY SSF52518 56 469 3.17E-139 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_00740 b32e55bc05de185899418a4f96901add 891 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 890 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VAA_00740 b32e55bc05de185899418a4f96901add 891 SUPERFAMILY SSF52518 475 699 6.83E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VAA_00740 b32e55bc05de185899418a4f96901add 891 PIRSF PIRSF000156 1 891 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VAA_00740 b32e55bc05de185899418a4f96901add 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 3.2E-10 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_00740 b32e55bc05de185899418a4f96901add 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 432 7.7E-5 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VAA_00740 b32e55bc05de185899418a4f96901add 891 Gene3D G3DSA:3.40.50.920 706 891 5.7E-68 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VAA_02669 448de3279c33c01e16d87aca9c940803 108 Gene3D G3DSA:3.30.70.600 6 108 1.4E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VAA_02669 448de3279c33c01e16d87aca9c940803 108 SUPERFAMILY SSF54999 10 106 1.96E-36 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VAA_02669 448de3279c33c01e16d87aca9c940803 108 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 8 107 26.898 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02669 448de3279c33c01e16d87aca9c940803 108 ProSitePatterns PS00361 Ribosomal protein S10 signature. 34 49 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02669 448de3279c33c01e16d87aca9c940803 108 SMART SM01403 12 106 8.0E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain VAA_02669 448de3279c33c01e16d87aca9c940803 108 Pfam PF00338 Ribosomal protein S10p/S20e 12 105 1.0E-34 T 13-10-2018 IPR027486 Ribosomal protein S10 domain VAA_02669 448de3279c33c01e16d87aca9c940803 108 PRINTS PR00971 Ribosomal protein S10 family signature 45 60 3.6E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02669 448de3279c33c01e16d87aca9c940803 108 PRINTS PR00971 Ribosomal protein S10 family signature 66 80 3.6E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02669 448de3279c33c01e16d87aca9c940803 108 PRINTS PR00971 Ribosomal protein S10 family signature 10 23 3.6E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02669 448de3279c33c01e16d87aca9c940803 108 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 9 106 1.3E-45 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02745 03736eea25cf98ec110a867ce580c317 195 Pfam PF01699 Sodium/calcium exchanger protein 49 190 2.4E-28 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VAA_02745 03736eea25cf98ec110a867ce580c317 195 Gene3D G3DSA:1.20.1420.30 79 195 3.4E-31 T 13-10-2018 VAA_01147 29683d4c8a822a9a526dbd11ed2968d1 216 Gene3D G3DSA:1.10.3720.10 13 189 9.7E-40 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01147 29683d4c8a822a9a526dbd11ed2968d1 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 171 3.5E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01147 29683d4c8a822a9a526dbd11ed2968d1 216 SUPERFAMILY SSF161098 15 174 3.01E-41 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03484 00696d81338907b914be7051fcbf2fb6 180 SUPERFAMILY SSF55021 1 84 3.1E-18 T 13-10-2018 VAA_03484 00696d81338907b914be7051fcbf2fb6 180 PIRSF PIRSF028103 1 178 2.6E-62 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VAA_03484 00696d81338907b914be7051fcbf2fb6 180 Gene3D G3DSA:3.30.70.260 87 180 3.5E-42 T 13-10-2018 VAA_03484 00696d81338907b914be7051fcbf2fb6 180 Gene3D G3DSA:3.30.70.260 1 85 7.3E-26 T 13-10-2018 VAA_03484 00696d81338907b914be7051fcbf2fb6 180 Pfam PF13740 ACT domain 3 78 1.9E-24 T 13-10-2018 VAA_03484 00696d81338907b914be7051fcbf2fb6 180 SUPERFAMILY SSF55021 87 176 1.24E-21 T 13-10-2018 VAA_01817 7d5e85f403cdacd8a6331816df75136e 173 Gene3D G3DSA:3.40.50.300 11 165 8.8E-57 T 13-10-2018 VAA_01817 7d5e85f403cdacd8a6331816df75136e 173 Gene3D G3DSA:2.20.25.120 54 86 8.8E-57 T 13-10-2018 VAA_01817 7d5e85f403cdacd8a6331816df75136e 173 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 11 143 1.1E-47 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VAA_01817 7d5e85f403cdacd8a6331816df75136e 173 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 11 167 1.0E-43 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VAA_01817 7d5e85f403cdacd8a6331816df75136e 173 SUPERFAMILY SSF52540 8 169 1.11E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00760 823dce45f2a26324de9a6a13f9f07b4d 765 SUPERFAMILY SSF52151 37 322 8.11E-57 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VAA_00760 823dce45f2a26324de9a6a13f9f07b4d 765 Pfam PF01734 Patatin-like phospholipase 43 233 1.2E-30 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VAA_00760 823dce45f2a26324de9a6a13f9f07b4d 765 Gene3D G3DSA:3.10.20.310 346 426 1.6E-9 T 13-10-2018 VAA_00760 823dce45f2a26324de9a6a13f9f07b4d 765 Gene3D G3DSA:3.40.1090.10 148 286 2.4E-17 T 13-10-2018 VAA_00760 823dce45f2a26324de9a6a13f9f07b4d 765 Gene3D G3DSA:3.40.1090.10 28 130 7.0E-28 T 13-10-2018 VAA_00760 823dce45f2a26324de9a6a13f9f07b4d 765 Pfam PF07244 Surface antigen variable number repeat 352 423 4.3E-7 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VAA_02549 70a17451245bb14d6b66be6722259770 612 Gene3D G3DSA:2.60.120.10 9 139 3.3E-10 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02549 70a17451245bb14d6b66be6722259770 612 SUPERFAMILY SSF51206 12 133 7.07E-15 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_02549 70a17451245bb14d6b66be6722259770 612 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 608 6.9E-40 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VAA_02549 70a17451245bb14d6b66be6722259770 612 Pfam PF00027 Cyclic nucleotide-binding domain 36 116 4.3E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_02549 70a17451245bb14d6b66be6722259770 612 Pfam PF03445 Putative nucleotidyltransferase DUF294 306 436 1.2E-40 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VAA_02549 70a17451245bb14d6b66be6722259770 612 SUPERFAMILY SSF81593 504 604 7.77E-5 T 13-10-2018 VAA_02549 70a17451245bb14d6b66be6722259770 612 SUPERFAMILY SSF54631 148 280 8.79E-18 T 13-10-2018 VAA_02549 70a17451245bb14d6b66be6722259770 612 Gene3D G3DSA:3.10.580.10 143 291 4.8E-18 T 13-10-2018 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 PIRSF PIRSF003095 1 433 8.7E-129 T 13-10-2018 IPR005215 Trigger factor GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Gene3D G3DSA:3.10.50.40 150 246 5.5E-107 T 13-10-2018 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 SUPERFAMILY SSF102735 1 131 4.97E-42 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 SUPERFAMILY SSF109998 248 429 3.14E-49 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Gene3D G3DSA:3.30.70.1050 1 115 1.4E-41 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 SUPERFAMILY SSF54534 89 240 1.51E-36 T 13-10-2018 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.827 T 13-10-2018 IPR005215 Trigger factor GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.8E-39 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 233 8.2E-12 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Gene3D G3DSA:1.10.3120.10 116 417 5.5E-107 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 3.7E-43 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VAA_02298 c6a90eaf6928c68af2329f284ec8883f 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.6E-143 T 13-10-2018 IPR005215 Trigger factor GO:0015031 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 85 398 4.2E-37 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 226 253 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 SUPERFAMILY SSF52283 79 208 4.25E-48 T 13-10-2018 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 SUPERFAMILY SSF55021 406 480 9.92E-18 T 13-10-2018 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 Gene3D G3DSA:3.40.50.720 181 369 4.5E-110 T 13-10-2018 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 301 317 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 190 366 1.9E-53 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 272 294 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 SUPERFAMILY SSF51735 180 367 3.76E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 Gene3D G3DSA:3.40.50.720 86 384 4.5E-110 T 13-10-2018 VAA_03794 d6639c665cd1f41d5d86f96de74de9b2 481 Gene3D G3DSA:3.30.70.260 400 480 1.2E-32 T 13-10-2018 VAA_03434 79b140949750a851083cae5b4ebaa3cd 190 SUPERFAMILY SSF52218 17 189 7.42E-35 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_03434 79b140949750a851083cae5b4ebaa3cd 190 Gene3D G3DSA:3.40.50.360 14 190 2.5E-32 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_03434 79b140949750a851083cae5b4ebaa3cd 190 Pfam PF03358 NADPH-dependent FMN reductase 17 156 6.7E-24 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VAA_00113 5ad74a23a828d58f399e591a5712347f 312 SUPERFAMILY SSF54862 165 272 3.98E-18 T 13-10-2018 VAA_00113 5ad74a23a828d58f399e591a5712347f 312 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 9.5E-24 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VAA_00113 5ad74a23a828d58f399e591a5712347f 312 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 300 5.6E-128 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VAA_00113 5ad74a23a828d58f399e591a5712347f 312 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.4E-20 T 13-10-2018 VAA_00113 5ad74a23a828d58f399e591a5712347f 312 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_00113 5ad74a23a828d58f399e591a5712347f 312 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 46.112 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VAA_01262 fe100800034798cd7997e60b71f672ac 363 Pfam PF12060 Domain of unknown function (DUF3541) 32 255 2.7E-115 T 13-10-2018 IPR021928 Protein of unknown function DUF3541 VAA_00619 0f6457d926eeedeb8a5fcd49c49ba4d3 90 Gene3D G3DSA:3.90.940.10 1 90 8.6E-30 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAA_00619 0f6457d926eeedeb8a5fcd49c49ba4d3 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_00619 0f6457d926eeedeb8a5fcd49c49ba4d3 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.7E-18 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAA_00619 0f6457d926eeedeb8a5fcd49c49ba4d3 90 SMART SM01409 8 61 1.3E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAA_00619 0f6457d926eeedeb8a5fcd49c49ba4d3 90 SUPERFAMILY SSF63562 1 78 9.81E-26 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VAA_00619 0f6457d926eeedeb8a5fcd49c49ba4d3 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VAA_01060 6c7cd7009baea732263c9f8eac731ba3 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 2.8E-125 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VAA_01060 6c7cd7009baea732263c9f8eac731ba3 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 56 441 2.5E-141 T 13-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VAA_03029 63a24563287796dd6474337bd7df07d3 731 PRINTS PR01035 Tetracycline resistance protein signature 604 625 1.6E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VAA_03029 63a24563287796dd6474337bd7df07d3 731 PRINTS PR01035 Tetracycline resistance protein signature 458 480 1.6E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VAA_03029 63a24563287796dd6474337bd7df07d3 731 PRINTS PR01035 Tetracycline resistance protein signature 339 355 1.6E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VAA_03029 63a24563287796dd6474337bd7df07d3 731 Pfam PF07690 Major Facilitator Superfamily 552 727 1.9E-9 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_03029 63a24563287796dd6474337bd7df07d3 731 Pfam PF07690 Major Facilitator Superfamily 338 520 4.5E-22 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_03029 63a24563287796dd6474337bd7df07d3 731 SUPERFAMILY SSF103473 337 724 6.41E-43 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_03029 63a24563287796dd6474337bd7df07d3 731 Gene3D G3DSA:1.20.1250.20 336 722 3.3E-41 T 13-10-2018 VAA_01477 2bdae53b1cef7b1350d7215778583787 284 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 28 274 3.3E-98 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 VAA_01477 2bdae53b1cef7b1350d7215778583787 284 SUPERFAMILY SSF51182 11 263 4.31E-69 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_01477 2bdae53b1cef7b1350d7215778583787 284 Pfam PF04962 KduI/IolB family 16 274 1.4E-107 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 VAA_01477 2bdae53b1cef7b1350d7215778583787 284 Gene3D G3DSA:2.60.120.10 30 137 2.8E-89 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01477 2bdae53b1cef7b1350d7215778583787 284 PIRSF PIRSF036628 11 279 1.9E-108 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 VAA_01477 2bdae53b1cef7b1350d7215778583787 284 Gene3D G3DSA:2.60.120.10 138 274 2.8E-89 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01472 895c14574555b402676ea729154061ae 579 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 45 454 8.9E-84 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAA_01472 895c14574555b402676ea729154061ae 579 Pfam PF00474 Sodium:solute symporter family 45 454 2.5E-49 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAA_01472 895c14574555b402676ea729154061ae 579 Gene3D G3DSA:1.20.1730.10 31 545 5.3E-121 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VAA_03034 f9821426ae39a1db3ddf7f7f13045d87 198 Pfam PF05947 Type VI secretion system, TssF 6 189 1.3E-54 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VAA_02837 7b9eef43579b9d4619b072e99d5cf59e 589 PIRSF PIRSF028304 1 589 2.0E-187 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VAA_02837 7b9eef43579b9d4619b072e99d5cf59e 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 589 1.3E-203 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VAA_02837 7b9eef43579b9d4619b072e99d5cf59e 589 Pfam PF05947 Type VI secretion system, TssF 5 588 6.4E-195 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VAA_02502 b8223d764fd689b500e07d63f9cca30e 294 Gene3D G3DSA:3.90.550.10 5 219 1.5E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02502 b8223d764fd689b500e07d63f9cca30e 294 Pfam PF00535 Glycosyl transferase family 2 6 174 1.9E-25 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_02502 b8223d764fd689b500e07d63f9cca30e 294 SUPERFAMILY SSF53448 6 271 3.84E-29 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02502 b8223d764fd689b500e07d63f9cca30e 294 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 8 289 4.8E-65 T 13-10-2018 IPR006446 Rhamnosyltransferase VAA_01367 45126af99c053fd35819dc128da9ea22 287 Pfam PF05114 Protein of unknown function (DUF692) 10 268 2.3E-91 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 VAA_01367 45126af99c053fd35819dc128da9ea22 287 SUPERFAMILY SSF51658 30 209 6.39E-12 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily VAA_01367 45126af99c053fd35819dc128da9ea22 287 Gene3D G3DSA:3.20.20.150 5 278 1.5E-81 T 13-10-2018 VAA_02292 932484ac621d08a079c48d33ee3b0ef1 130 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 68 130 3.9E-23 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VAA_02292 932484ac621d08a079c48d33ee3b0ef1 130 Pfam PF12836 Helix-hairpin-helix motif 68 128 6.6E-20 T 13-10-2018 VAA_02292 932484ac621d08a079c48d33ee3b0ef1 130 Gene3D G3DSA:1.10.150.280 56 130 5.6E-20 T 13-10-2018 VAA_02292 932484ac621d08a079c48d33ee3b0ef1 130 SUPERFAMILY SSF47781 62 130 4.22E-23 T 13-10-2018 IPR010994 RuvA domain 2-like VAA_02633 5644ed5833240ee5372c04b0acb12612 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 28.899 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 Pfam PF01202 Shikimate kinase 13 169 3.2E-55 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 PRINTS PR01100 Shikimate kinase family signature 31 44 5.3E-29 T 13-10-2018 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 PRINTS PR01100 Shikimate kinase family signature 59 67 5.3E-29 T 13-10-2018 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 PRINTS PR01100 Shikimate kinase family signature 7 22 5.3E-29 T 13-10-2018 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 PRINTS PR01100 Shikimate kinase family signature 98 115 5.3E-29 T 13-10-2018 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 PRINTS PR01100 Shikimate kinase family signature 77 86 5.3E-29 T 13-10-2018 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 Gene3D G3DSA:3.40.50.300 1 172 5.4E-55 T 13-10-2018 VAA_02633 5644ed5833240ee5372c04b0acb12612 173 SUPERFAMILY SSF52540 4 169 2.1E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00004 75461d8336187514124fc0e087f45494 358 Pfam PF04245 37-kD nucleoid-associated bacterial protein 18 345 1.6E-33 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VAA_01363 3183b2e6cc8c89413b4c887fc59719d0 378 PIRSF PIRSF000267 2 377 1.4E-110 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAA_01363 3183b2e6cc8c89413b4c887fc59719d0 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 7.4E-94 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAA_01363 3183b2e6cc8c89413b4c887fc59719d0 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.8E-139 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAA_02132 5ce3577da11d41f8cd21244145caac1b 224 Pfam PF04012 PspA/IM30 family 4 219 2.1E-58 T 13-10-2018 IPR007157 PspA/IM30 VAA_02132 5ce3577da11d41f8cd21244145caac1b 224 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 3 221 2.1E-93 T 13-10-2018 IPR014319 Phage shock protein, PspA VAA_00869 a0be918f5327b4f8af8cea161adc1e94 94 Gene3D G3DSA:3.30.70.260 1 89 1.8E-11 T 13-10-2018 VAA_00869 a0be918f5327b4f8af8cea161adc1e94 94 Pfam PF13710 ACT domain 12 73 5.5E-21 T 13-10-2018 VAA_00869 a0be918f5327b4f8af8cea161adc1e94 94 SUPERFAMILY SSF55021 3 74 3.46E-10 T 13-10-2018 VAA_00869 a0be918f5327b4f8af8cea161adc1e94 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 70 0.003 T 13-10-2018 VAA_02650 37ea951219b7657c0c69052c3440d5ce 264 Gene3D G3DSA:3.10.180.50 3 239 2.5E-94 T 13-10-2018 VAA_02650 37ea951219b7657c0c69052c3440d5ce 264 Pfam PF07063 Domain of unknown function (DUF1338) 134 261 6.9E-29 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 VAA_02650 37ea951219b7657c0c69052c3440d5ce 264 Pfam PF07063 Domain of unknown function (DUF1338) 30 116 2.6E-20 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 VAA_02650 37ea951219b7657c0c69052c3440d5ce 264 SMART SM01150 3 262 5.1E-117 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 VAA_02207 3294361b71e934ef487781034f3e3cad 205 SUPERFAMILY SSF101322 2 204 2.88E-80 T 13-10-2018 IPR035932 HflD-like superfamily VAA_02207 3294361b71e934ef487781034f3e3cad 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.7E-77 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD VAA_02207 3294361b71e934ef487781034f3e3cad 205 Gene3D G3DSA:1.10.3890.10 1 205 4.6E-78 T 13-10-2018 IPR035932 HflD-like superfamily VAA_02207 3294361b71e934ef487781034f3e3cad 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 5.0E-95 T 13-10-2018 VAA_02207 3294361b71e934ef487781034f3e3cad 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 36.145 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD VAA_02733 3f0bdcbb1f61a97a23995c3ad0c988ad 447 SUPERFAMILY SSF111283 13 447 2.75E-127 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VAA_02733 3f0bdcbb1f61a97a23995c3ad0c988ad 447 Gene3D G3DSA:3.30.2290.10 3 233 2.5E-82 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VAA_02733 3f0bdcbb1f61a97a23995c3ad0c988ad 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.5E-61 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VAA_00133 cee2f941a26df0526a4f78c574a37993 306 Pfam PF08878 Domain of unknown function (DUF1837) 52 291 1.6E-50 T 13-10-2018 IPR014976 Protein of unknown function DUF1837 VAA_02081 396b2935e0fc828283b1d1699d25ba49 213 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 22 211 26.331 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VAA_02081 396b2935e0fc828283b1d1699d25ba49 213 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 23 211 3.0E-90 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VAA_02081 396b2935e0fc828283b1d1699d25ba49 213 Pfam PF02508 Rnf-Nqr subunit, membrane protein 25 210 5.0E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_02081 396b2935e0fc828283b1d1699d25ba49 213 PIRSF PIRSF006102 20 213 1.4E-64 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_03551 5ca89f23621f8a442926de65205990fe 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 35.966 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 VAA_03551 5ca89f23621f8a442926de65205990fe 155 Pfam PF00075 RNase H 3 142 7.5E-53 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VAA_03551 5ca89f23621f8a442926de65205990fe 155 SUPERFAMILY SSF53098 3 143 1.9E-57 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_03551 5ca89f23621f8a442926de65205990fe 155 Gene3D G3DSA:3.30.420.10 1 155 5.0E-60 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_02346 f42f49f5a101a90be5c08ff4bbb5ff7d 273 Pfam PF13847 Methyltransferase domain 84 224 1.1E-10 T 13-10-2018 IPR025714 Methyltransferase domain VAA_02346 f42f49f5a101a90be5c08ff4bbb5ff7d 273 PIRSF PIRSF018249 1 272 3.1E-83 T 13-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VAA_02346 f42f49f5a101a90be5c08ff4bbb5ff7d 273 Gene3D G3DSA:3.40.50.150 1 273 1.1E-77 T 13-10-2018 VAA_02346 f42f49f5a101a90be5c08ff4bbb5ff7d 273 SUPERFAMILY SSF53335 5 256 6.84E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01436 a65c0657ace9bf60c309e6321139ad59 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.4E-71 T 13-10-2018 IPR021334 Protein of unknown function DUF2947 VAA_02751 e8c3023bb7ea1436e44b89265fb32f01 220 Pfam PF05494 MlaC protein 41 207 2.9E-48 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VAA_02751 e8c3023bb7ea1436e44b89265fb32f01 220 PIRSF PIRSF004649 9 219 8.2E-56 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VAA_02751 e8c3023bb7ea1436e44b89265fb32f01 220 Gene3D G3DSA:3.10.450.710 33 211 5.8E-39 T 13-10-2018 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 SUPERFAMILY SSF53335 76 269 1.23E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 SMART SM00138 8 272 5.4E-138 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 2.3E-68 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.6E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.6E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.6E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.6E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.6E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.6E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 5.1E-10 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 Gene3D G3DSA:3.40.50.150 75 274 7.7E-59 T 13-10-2018 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 SUPERFAMILY SSF47757 3 75 8.5E-15 T 13-10-2018 VAA_03524 5da5a7fe303855a897ca23c95acddfa4 275 Gene3D G3DSA:1.10.155.10 1 74 8.2E-11 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VAA_01746 43ae79c4182795bacb4fc06b9b167391 402 PIRSF PIRSF000524 34 402 1.6E-111 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VAA_01746 43ae79c4182795bacb4fc06b9b167391 402 SUPERFAMILY SSF53383 38 400 4.27E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01746 43ae79c4182795bacb4fc06b9b167391 402 Gene3D G3DSA:3.90.1150.10 38 398 4.5E-143 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01746 43ae79c4182795bacb4fc06b9b167391 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 218 238 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VAA_01746 43ae79c4182795bacb4fc06b9b167391 402 Pfam PF00266 Aminotransferase class-V 42 379 4.2E-39 T 13-10-2018 IPR000192 Aminotransferase class V domain VAA_01746 43ae79c4182795bacb4fc06b9b167391 402 Gene3D G3DSA:3.40.640.10 51 299 4.5E-143 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02202 23fd87d03e35e60b8ebc1d6b74b1f588 536 Pfam PF03553 Na+/H+ antiporter family 168 500 8.1E-104 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VAA_03422 21fab98ec69135bdf117ee0ecdb5949a 256 PRINTS PR00412 Epoxide hydrolase signature 82 95 4.6E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_03422 21fab98ec69135bdf117ee0ecdb5949a 256 PRINTS PR00412 Epoxide hydrolase signature 39 54 4.6E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_03422 21fab98ec69135bdf117ee0ecdb5949a 256 PRINTS PR00412 Epoxide hydrolase signature 231 253 4.6E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VAA_03422 21fab98ec69135bdf117ee0ecdb5949a 256 Gene3D G3DSA:3.40.50.1820 5 254 2.3E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03422 21fab98ec69135bdf117ee0ecdb5949a 256 SUPERFAMILY SSF53474 5 254 5.32E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03422 21fab98ec69135bdf117ee0ecdb5949a 256 Pfam PF12697 Alpha/beta hydrolase family 16 248 1.4E-24 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_03032 16b515185e2f8ec70df32d80606ad1ec 327 Pfam PF06996 Type VI secretion, TssG 30 310 1.8E-43 T 13-10-2018 IPR010732 Type VI secretion, TssG-like VAA_02841 2afd6d4cdf8499a370444b01f6de1a44 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.1E-156 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VAA_02841 2afd6d4cdf8499a370444b01f6de1a44 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.9E-153 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VAA_00321 d48bcdc062046e671191702a8aed6cb0 433 Pfam PF05144 Phage replication protein CRI 2 277 1.9E-72 T 13-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 VAA_00321 d48bcdc062046e671191702a8aed6cb0 433 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 414 1.5E-106 T 13-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 VAA_00321 d48bcdc062046e671191702a8aed6cb0 433 Pfam PF05155 Phage X family 323 414 7.7E-27 T 13-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 VAA_00083 23f4813310d4626edeac0760f7e5b7eb 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 30.547 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VAA_00083 23f4813310d4626edeac0760f7e5b7eb 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 6.0E-62 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VAA_00083 23f4813310d4626edeac0760f7e5b7eb 149 Pfam PF06610 L-alanine exporter 8 142 8.5E-67 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 Pfam PF00691 OmpA family 231 325 6.0E-23 T 13-10-2018 IPR006665 OmpA-like domain VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 SUPERFAMILY SSF103088 208 331 1.7E-36 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 SUPERFAMILY SSF56925 30 184 2.88E-26 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 Gene3D G3DSA:3.30.1330.60 211 336 1.7E-41 T 13-10-2018 IPR036737 OmpA-like domain superfamily VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 PRINTS PR01021 OMPA domain signature 231 253 1.2E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 PRINTS PR01021 OMPA domain signature 261 276 1.2E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 PRINTS PR01021 OMPA domain signature 276 292 1.2E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 Pfam PF01389 OmpA-like transmembrane domain 31 183 1.7E-38 T 13-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VAA_03534 22e595f6cddf44cad55cdc3c3f04cd58 339 Gene3D G3DSA:2.40.160.20 17 202 3.6E-37 T 13-10-2018 VAA_00689 29c54ff9afd13c9a345e9bf4045e7051 98 Pfam PF04977 Septum formation initiator 16 94 2.9E-24 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VAA_00689 29c54ff9afd13c9a345e9bf4045e7051 98 Hamap MF_00599 Cell division protein FtsB [ftsB]. 6 95 34.487 T 13-10-2018 IPR023081 Cell division protein FtsB VAA_00689 29c54ff9afd13c9a345e9bf4045e7051 98 Gene3D G3DSA:1.20.5.400 27 68 2.4E-7 T 13-10-2018 VAA_01650 3aee081b84806bf1827dd2bf26ee6c32 235 Pfam PF04231 Endonuclease I 34 232 4.7E-45 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 VAA_01650 3aee081b84806bf1827dd2bf26ee6c32 235 SUPERFAMILY SSF54060 25 233 2.24E-94 T 13-10-2018 VAA_00129 e4a1a21ffc662e475163845d1d114234 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 9 91 2.1E-17 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VAA_00129 e4a1a21ffc662e475163845d1d114234 91 Pfam PF04077 DsrH like protein 9 87 6.6E-17 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VAA_00129 e4a1a21ffc662e475163845d1d114234 91 SUPERFAMILY SSF75169 1 91 4.0E-17 T 13-10-2018 IPR027396 DsrEFH-like VAA_00129 e4a1a21ffc662e475163845d1d114234 91 Gene3D G3DSA:3.40.1260.10 1 91 6.7E-19 T 13-10-2018 IPR027396 DsrEFH-like VAA_03154 1a43633f8fe4bd5534a548ab9e88b333 356 TIGRFAM TIGR02794 tolA_full: protein TolA 12 355 6.6E-78 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VAA_03154 1a43633f8fe4bd5534a548ab9e88b333 356 Pfam PF06519 TolA C-terminal 255 353 6.5E-28 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VAA_03154 1a43633f8fe4bd5534a548ab9e88b333 356 SUPERFAMILY SSF74653 265 356 7.65E-13 T 13-10-2018 VAA_03154 1a43633f8fe4bd5534a548ab9e88b333 356 Gene3D G3DSA:3.30.1150.10 254 356 4.0E-24 T 13-10-2018 VAA_00903 362e0fecd611541510369f2c985287f3 128 Gene3D G3DSA:2.60.120.10 1 116 5.0E-45 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_00903 362e0fecd611541510369f2c985287f3 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 38.308 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VAA_00903 362e0fecd611541510369f2c985287f3 128 SUPERFAMILY SSF51182 12 126 2.23E-24 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_00903 362e0fecd611541510369f2c985287f3 128 Pfam PF06339 Ectoine synthase 1 126 5.3E-59 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VAA_00903 362e0fecd611541510369f2c985287f3 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 2.0E-50 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VAA_04078 d86b2d56d3fa093cc042ec3190c2a346 44 Pfam PF13817 IS66 C-terminal element 4 40 2.5E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_00981 d86b2d56d3fa093cc042ec3190c2a346 44 Pfam PF13817 IS66 C-terminal element 4 40 2.5E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal VAA_02526 44bf36f229d3964a03bc24ebaae7f442 411 SUPERFAMILY SSF50182 186 251 5.23E-11 T 13-10-2018 IPR010920 LSM domain superfamily VAA_02526 44bf36f229d3964a03bc24ebaae7f442 411 Pfam PF00924 Mechanosensitive ion channel 143 396 5.9E-50 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAA_01797 9ad8ce2c633fa47c4cfc4471bd1c6795 235 Gene3D G3DSA:3.20.20.190 1 235 1.0E-70 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAA_01797 9ad8ce2c633fa47c4cfc4471bd1c6795 235 SUPERFAMILY SSF51695 2 233 3.14E-66 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VAA_01797 9ad8ce2c633fa47c4cfc4471bd1c6795 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 8.5E-36 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VAA_03398 e32f4d84eee1743ea168c427943cfe72 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 3.4E-13 T 13-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VAA_03398 e32f4d84eee1743ea168c427943cfe72 76 SUPERFAMILY SSF46785 1 54 2.52E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01429 421cc9493a69b3531fce24330e4a6807 463 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 162 4.2E-29 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 Pfam PF00425 chorismate binding enzyme 197 451 1.4E-94 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VAA_01429 421cc9493a69b3531fce24330e4a6807 463 Gene3D G3DSA:3.60.120.10 12 461 1.7E-171 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 116 453 4.2E-117 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 SUPERFAMILY SSF56322 16 460 1.05E-143 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 PRINTS PR00095 Anthranilate synthase component I signature 313 326 2.6E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 PRINTS PR00095 Anthranilate synthase component I signature 408 422 2.6E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 PRINTS PR00095 Anthranilate synthase component I signature 299 312 2.6E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_01429 421cc9493a69b3531fce24330e4a6807 463 PRINTS PR00095 Anthranilate synthase component I signature 393 407 2.6E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.42 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 SUPERFAMILY SSF54686 3 133 4.71E-53 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 6.6E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 6.6E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 6.6E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 6.6E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 Gene3D G3DSA:3.90.1170.10 1 136 2.4E-53 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.2E-46 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 3.5E-57 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02677 77fd8592ce8d3655f7ee03a68b11bbcc 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03585 d31324622c6d7ef58b301b3fcf94983f 155 Pfam PF01029 NusB family 11 149 3.4E-35 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VAA_03585 d31324622c6d7ef58b301b3fcf94983f 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.724 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 VAA_03585 d31324622c6d7ef58b301b3fcf94983f 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 1.8E-41 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 VAA_03585 d31324622c6d7ef58b301b3fcf94983f 155 Gene3D G3DSA:1.10.940.10 3 155 8.5E-47 T 13-10-2018 IPR035926 NusB-like superfamily VAA_03585 d31324622c6d7ef58b301b3fcf94983f 155 SUPERFAMILY SSF48013 7 153 1.18E-38 T 13-10-2018 IPR035926 NusB-like superfamily VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 SUPERFAMILY SSF52096 5 318 9.57E-104 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.612 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.9E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.9E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.9E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.9E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.9E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.9E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 Gene3D G3DSA:3.90.226.10 2 318 9.3E-120 T 13-10-2018 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 6.5E-163 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_03561 30bf2c08e8123c1dc1342d141e96af4b 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 9.3E-65 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VAA_01443 0850b3285c301d6cd7f547b208694191 157 SMART SM00448 4 125 9.2E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_01443 0850b3285c301d6cd7f547b208694191 157 SUPERFAMILY SSF52172 1 130 3.7E-20 T 13-10-2018 IPR011006 CheY-like superfamily VAA_01443 0850b3285c301d6cd7f547b208694191 157 Gene3D G3DSA:3.40.50.2300 1 135 8.4E-20 T 13-10-2018 VAA_01443 0850b3285c301d6cd7f547b208694191 157 Pfam PF00072 Response regulator receiver domain 6 125 5.6E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02350 1bcff854ad4f99911605c8bb1b1cc86c 82 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 5.1E-6 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VAA_01877 59d6d581e960d397c2094fb0d2220d02 131 Pfam PF02470 MlaD protein 11 75 1.1E-5 T 13-10-2018 IPR003399 Mce/MlaD VAA_02720 031c2b99ce0308809302d9b6106548fc 202 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 20 202 5.4E-86 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VAA_02720 031c2b99ce0308809302d9b6106548fc 202 Gene3D G3DSA:3.40.30.10 38 198 2.7E-5 T 13-10-2018 VAA_02720 031c2b99ce0308809302d9b6106548fc 202 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 42 201 3.5E-75 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.9E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.9E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.9E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 Gene3D G3DSA:1.10.10.10 2 88 3.9E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 Pfam PF03466 LysR substrate binding domain 92 296 5.5E-43 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 Gene3D G3DSA:3.40.190.10 165 265 3.5E-65 T 13-10-2018 VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 Gene3D G3DSA:3.40.190.10 95 294 3.5E-65 T 13-10-2018 VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 SUPERFAMILY SSF46785 4 114 8.11E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02626 371366ebaf0c660f0c8607723010b8ed 300 SUPERFAMILY SSF53850 93 298 2.17E-38 T 13-10-2018 VAA_01642 30c28f911cd02a893524cf2850a68ecc 168 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 2.8E-36 T 13-10-2018 IPR009476 Protein of unknown function DUF1097 VAA_01848 025f6fbd3f6b456699879b133051fbd7 58 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 3.7E-14 T 13-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VAA_02635 6346442d3c16da04e7199c81b32f0b53 499 Gene3D G3DSA:3.40.50.300 11 167 7.3E-6 T 13-10-2018 VAA_02635 6346442d3c16da04e7199c81b32f0b53 499 Pfam PF05036 Sporulation related domain 412 485 5.2E-7 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAA_02635 6346442d3c16da04e7199c81b32f0b53 499 Pfam PF13401 AAA domain 31 131 5.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_02635 6346442d3c16da04e7199c81b32f0b53 499 SUPERFAMILY SSF52540 25 191 1.73E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02635 6346442d3c16da04e7199c81b32f0b53 499 Gene3D G3DSA:3.30.70.1070 401 496 8.4E-26 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_01749 09d04a58ba79afaf0453f1afba5f9b50 448 Pfam PF00999 Sodium/hydrogen exchanger family 53 437 5.8E-54 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 SUPERFAMILY SSF53850 90 290 2.76E-32 T 13-10-2018 VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 Pfam PF03466 LysR substrate binding domain 89 288 8.3E-27 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.8E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.3E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.3E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.3E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 SUPERFAMILY SSF46785 3 83 9.07E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 Gene3D G3DSA:1.10.10.10 1 90 7.2E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02151 2d5ce06ea993064d61d98f3575a57fd4 296 Gene3D G3DSA:3.40.190.290 93 294 5.0E-43 T 13-10-2018 VAA_01801 e7af870d9ca3e22e399da7538b094a59 182 Pfam PF01618 MotA/TolQ/ExbB proton channel family 71 175 4.8E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAA_00951 44f957c9aa484a1de9276b413c24f189 113 SMART SM00418 5 83 6.0E-23 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00951 44f957c9aa484a1de9276b413c24f189 113 SUPERFAMILY SSF46785 5 85 2.19E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_00951 44f957c9aa484a1de9276b413c24f189 113 Gene3D G3DSA:1.10.10.10 3 88 2.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00951 44f957c9aa484a1de9276b413c24f189 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 7.5E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00951 44f957c9aa484a1de9276b413c24f189 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 7.5E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00951 44f957c9aa484a1de9276b413c24f189 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 7.5E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00951 44f957c9aa484a1de9276b413c24f189 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 7.5E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_00951 44f957c9aa484a1de9276b413c24f189 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 2.8E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VAA_02839 2d8b7e5e0794901111b86878b9ba02ea 490 Gene3D G3DSA:2.60.200.20 2 115 9.6E-10 T 13-10-2018 VAA_02839 2d8b7e5e0794901111b86878b9ba02ea 490 SUPERFAMILY SSF49879 31 108 1.02E-9 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VAA_02839 2d8b7e5e0794901111b86878b9ba02ea 490 Pfam PF00498 FHA domain 33 100 1.8E-8 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VAA_02839 2d8b7e5e0794901111b86878b9ba02ea 490 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 7 484 7.0E-84 T 13-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VAA_02527 ae20213684a428360ee8b2d6d775da07 308 SUPERFAMILY SSF52283 31 114 1.25E-5 T 13-10-2018 VAA_02527 ae20213684a428360ee8b2d6d775da07 308 SUPERFAMILY SSF51735 93 274 1.81E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02527 ae20213684a428360ee8b2d6d775da07 308 Gene3D G3DSA:3.40.50.720 92 277 3.2E-94 T 13-10-2018 VAA_02527 ae20213684a428360ee8b2d6d775da07 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 4.2E-46 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VAA_02527 ae20213684a428360ee8b2d6d775da07 308 Gene3D G3DSA:3.40.50.720 34 300 3.2E-94 T 13-10-2018 VAA_00832 ef1e8002d670fcac8490c0fe492a2866 129 Pfam PF03899 ATP synthase I chain 15 111 1.4E-19 T 13-10-2018 IPR005598 ATP synthase protein I VAA_00933 631b7e67287da500142cf182c3542cf1 169 Gene3D G3DSA:1.20.950.20 1 165 4.7E-9 T 13-10-2018 VAA_00933 631b7e67287da500142cf182c3542cf1 169 SUPERFAMILY SSF81342 2 165 4.0E-26 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VAA_00933 631b7e67287da500142cf182c3542cf1 169 Pfam PF01292 Prokaryotic cytochrome b561 6 165 9.6E-17 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VAA_02219 3f2bd9391e311ef28ea5a58e1deeb590 287 SUPERFAMILY SSF53697 96 281 1.23E-39 T 13-10-2018 VAA_02219 3f2bd9391e311ef28ea5a58e1deeb590 287 Pfam PF01380 SIS domain 127 255 1.8E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_02219 3f2bd9391e311ef28ea5a58e1deeb590 287 Gene3D G3DSA:3.40.50.10490 97 279 1.4E-39 T 13-10-2018 VAA_02219 3f2bd9391e311ef28ea5a58e1deeb590 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 79 1.7E-29 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VAA_02219 3f2bd9391e311ef28ea5a58e1deeb590 287 SUPERFAMILY SSF46689 3 83 6.81E-22 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02219 3f2bd9391e311ef28ea5a58e1deeb590 287 Gene3D G3DSA:1.10.10.10 1 82 1.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 Gene3D G3DSA:1.25.40.10 32 211 1.8E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 SUPERFAMILY SSF81901 64 179 5.36E-22 T 13-10-2018 VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 SMART SM00671 144 179 34.0 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 SMART SM00671 72 107 0.015 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 SMART SM00671 108 143 2.9E-6 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 Pfam PF08238 Sel1 repeat 76 106 0.025 T 13-10-2018 IPR006597 Sel1-like repeat VAA_02665 5ba9ce36d2dcc001589e8720f1b6ba55 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 13-10-2018 IPR006597 Sel1-like repeat VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 ProSitePatterns PS01053 Arginase family signature. 266 287 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 SUPERFAMILY SSF52768 21 340 4.86E-85 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 PIRSF PIRSF036979 34 343 4.5E-30 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 PRINTS PR00116 Arginase signature 137 152 1.4E-5 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 PRINTS PR00116 Arginase signature 263 292 1.4E-5 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 Hamap MF_00737 Formimidoylglutamase [hutG]. 16 338 41.72 T 13-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 TIGRFAM TIGR01227 hutG: formimidoylglutamase 21 338 3.0E-114 T 13-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 Gene3D G3DSA:3.40.800.10 12 343 1.6E-131 T 13-10-2018 VAA_03125 7f83f5ec82c5c9b721d89397f6e77d17 343 Pfam PF00491 Arginase family 58 336 2.8E-62 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VAA_01774 da1b5011cfb3d9b0fd826bbca8e09f6c 181 Pfam PF11355 Protein of unknown function (DUF3157) 6 179 3.2E-51 T 13-10-2018 IPR021501 Protein of unknown function DUF3157 VAA_01532 247e89465712f14407f377173ba2a0e5 247 SUPERFAMILY SSF103473 2 241 2.88E-20 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01532 247e89465712f14407f377173ba2a0e5 247 Gene3D G3DSA:1.20.1250.20 1 242 7.9E-17 T 13-10-2018 VAA_01532 247e89465712f14407f377173ba2a0e5 247 Pfam PF07690 Major Facilitator Superfamily 3 204 9.4E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 619 1.3E-40 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 438 1.1E-45 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 SMART SM00116 167 214 1.9E-7 T 13-10-2018 IPR000644 CBS domain VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 SMART SM00116 231 278 9.1E-4 T 13-10-2018 IPR000644 CBS domain VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 SUPERFAMILY SSF54631 155 275 1.52E-29 T 13-10-2018 VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Gene3D G3DSA:2.60.120.10 15 150 2.4E-14 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Gene3D G3DSA:3.10.580.10 152 283 2.5E-31 T 13-10-2018 VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Pfam PF00027 Cyclic nucleotide-binding domain 59 127 5.4E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 SUPERFAMILY SSF51206 16 135 2.62E-16 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Pfam PF00571 CBS domain 160 211 8.8E-10 T 13-10-2018 IPR000644 CBS domain VAA_01473 5ee23e9d701eed3817fc145e2ca6de96 626 Pfam PF00571 CBS domain 224 275 1.0E-6 T 13-10-2018 IPR000644 CBS domain VAA_01583 e0d32b39fd8e772a29932b0c30bc3750 193 Pfam PF04509 CheC-like family 9 43 5.8E-12 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 VAA_01583 e0d32b39fd8e772a29932b0c30bc3750 193 Gene3D G3DSA:3.40.1550.10 2 190 6.4E-33 T 13-10-2018 IPR028976 CheC-like superfamily VAA_01583 e0d32b39fd8e772a29932b0c30bc3750 193 SUPERFAMILY SSF103039 3 186 2.62E-31 T 13-10-2018 IPR028976 CheC-like superfamily VAA_00679 fa6e94e8f00b6b7260b60b1bdfca92c5 147 Gene3D G3DSA:1.10.10.410 91 147 1.9E-18 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VAA_00679 fa6e94e8f00b6b7260b60b1bdfca92c5 147 SUPERFAMILY SSF89095 1 146 9.42E-42 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VAA_00679 fa6e94e8f00b6b7260b60b1bdfca92c5 147 Pfam PF09424 Yqey-like protein 7 146 7.8E-55 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VAA_00679 fa6e94e8f00b6b7260b60b1bdfca92c5 147 Gene3D G3DSA:1.10.1510.10 1 90 3.2E-26 T 13-10-2018 VAA_00241 53e8504ac44de71bfb166a1e44887ce1 353 Gene3D G3DSA:1.20.1170.10 38 352 2.6E-6 T 13-10-2018 VAA_00241 53e8504ac44de71bfb166a1e44887ce1 353 SUPERFAMILY SSF58100 38 342 5.49E-13 T 13-10-2018 VAA_01263 d4058e3360996be9942a845d0261fded 308 SUPERFAMILY SSF103481 42 137 3.66E-11 T 13-10-2018 VAA_01263 d4058e3360996be9942a845d0261fded 308 Pfam PF00892 EamA-like transporter family 8 136 3.1E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_01263 d4058e3360996be9942a845d0261fded 308 Pfam PF00892 EamA-like transporter family 153 287 1.8E-6 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 9.4E-90 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 Pfam PF01026 TatD related DNase 3 253 1.8E-75 T 13-10-2018 IPR001130 TatD family GO:0016788 VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 PIRSF PIRSF005902 1 258 1.8E-79 T 13-10-2018 IPR001130 TatD family GO:0016788 VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 Gene3D G3DSA:3.20.20.140 1 259 3.6E-97 T 13-10-2018 VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 SUPERFAMILY SSF51556 1 253 4.84E-86 T 13-10-2018 IPR032466 Metal-dependent hydrolase VAA_03336 838298c3bbc605fafd30d3b28dc58eeb 261 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 SUPERFAMILY SSF56601 27 461 6.19E-85 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VAA_00793 52f91049274150b5cc072f3c8427e22b 480 Gene3D G3DSA:3.50.80.20 87 176 5.1E-16 T 13-10-2018 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 Gene3D G3DSA:3.40.710.10 263 473 4.6E-49 T 13-10-2018 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 Gene3D G3DSA:3.40.710.10 25 86 9.7E-6 T 13-10-2018 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 32 463 1.8E-105 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 56 441 4.6E-104 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 340 354 2.4E-27 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 59 78 2.4E-27 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 281 303 2.4E-27 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 2.4E-27 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00793 52f91049274150b5cc072f3c8427e22b 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 419 432 2.4E-27 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VAA_00094 cfdc8e2e13cf0eba153d99618a1ff280 623 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.2E-142 T 13-10-2018 IPR021781 Protein of unknown function DUF3346 VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 SUPERFAMILY SSF53613 6 300 1.08E-69 T 13-10-2018 IPR029056 Ribokinase-like VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 Gene3D G3DSA:3.40.1190.20 2 311 8.2E-97 T 13-10-2018 IPR029056 Ribokinase-like VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 2.4E-103 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 2.6E-104 T 13-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 Pfam PF00294 pfkB family carbohydrate kinase 26 295 4.2E-52 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_01006 26d062c0707dad0bd30b13fc6372b07a 317 PIRSF PIRSF000535 2 311 4.5E-99 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 SMART SM00382 281 419 1.7E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 Gene3D G3DSA:3.40.50.300 277 463 5.3E-58 T 13-10-2018 VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 Pfam PF00448 SRP54-type protein, GTPase domain 284 472 6.0E-39 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 Gene3D G3DSA:1.20.120.1380 258 466 5.3E-58 T 13-10-2018 VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 370 2.5E-86 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 SUPERFAMILY SSF52540 278 470 4.46E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03391 c07c4be7e3b28f7413a347b27b30a0ac 495 SMART SM00962 282 475 1.1E-65 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VAA_03075 5e2341879477f020a0b4ccdf63336b00 404 Pfam PF07690 Major Facilitator Superfamily 16 352 1.9E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_03075 5e2341879477f020a0b4ccdf63336b00 404 Gene3D G3DSA:1.20.1250.20 5 391 1.7E-50 T 13-10-2018 VAA_03075 5e2341879477f020a0b4ccdf63336b00 404 SUPERFAMILY SSF103473 7 391 3.14E-56 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_02899 3ec44817d273d7f94ad2c530f213f69b 147 Pfam PF04314 Copper chaperone PCu(A)C 25 133 1.1E-38 T 13-10-2018 IPR007410 Copper chaperone PCuAC VAA_02899 3ec44817d273d7f94ad2c530f213f69b 147 Gene3D G3DSA:2.60.40.1890 29 144 8.1E-40 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily VAA_02899 3ec44817d273d7f94ad2c530f213f69b 147 SUPERFAMILY SSF110087 3 141 3.01E-48 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily VAA_02885 e8f73188466497d57a509969598a1dbe 160 Gene3D G3DSA:3.40.930.10 1 160 5.1E-50 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02885 e8f73188466497d57a509969598a1dbe 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02885 e8f73188466497d57a509969598a1dbe 160 SUPERFAMILY SSF55804 5 152 3.92E-35 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02885 e8f73188466497d57a509969598a1dbe 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 2.6E-35 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_00945 6d430e4bcf2dec072178e22bbf1956df 247 SMART SM00481 5 79 2.3E-5 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VAA_00945 6d430e4bcf2dec072178e22bbf1956df 247 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 51.897 T 13-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VAA_00945 6d430e4bcf2dec072178e22bbf1956df 247 SUPERFAMILY SSF89550 5 244 1.96E-59 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VAA_00945 6d430e4bcf2dec072178e22bbf1956df 247 Gene3D G3DSA:3.20.20.140 3 247 2.0E-62 T 13-10-2018 VAA_3064 71fc6952fad7bbd02ae77751c2189e34 378 Gene3D G3DSA:3.40.1710.10 44 123 2.6E-5 T 13-10-2018 VAA_3064 71fc6952fad7bbd02ae77751c2189e34 378 Pfam PF12698 ABC-2 family transporter protein 25 372 3.9E-42 T 13-10-2018 VAA_03146 6c0711107324ce4766ef662a58434f3d 390 SUPERFAMILY SSF52540 125 219 1.4E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03146 6c0711107324ce4766ef662a58434f3d 390 Gene3D G3DSA:3.40.50.300 78 222 4.5E-11 T 13-10-2018 VAA_03146 6c0711107324ce4766ef662a58434f3d 390 Pfam PF07728 AAA domain (dynein-related subfamily) 127 205 1.3E-8 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VAA_03241 41e4272cc92634d43a1a14d3aca64e64 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 4.4E-57 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 VAA_03241 41e4272cc92634d43a1a14d3aca64e64 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.614 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 VAA_03734 8d7bbb0539d27af5729f8ed0d4f64070 245 SUPERFAMILY SSF46626 16 209 1.09E-48 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_03734 8d7bbb0539d27af5729f8ed0d4f64070 245 Pfam PF02167 Cytochrome C1 family 34 244 2.3E-18 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VAA_03734 8d7bbb0539d27af5729f8ed0d4f64070 245 Gene3D G3DSA:1.10.760.10 26 210 5.1E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 SUPERFAMILY SSF54719 84 193 1.83E-42 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 Gene3D G3DSA:1.10.287.990 20 82 3.8E-25 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.2E-37 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 2.8E-34 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 Gene3D G3DSA:2.40.500.20 83 194 3.3E-41 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 SUPERFAMILY SSF46609 1 84 4.06E-35 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_03368 3df50bcbcdd4c6d8dbf50240029c8489 194 PIRSF PIRSF000349 1 194 9.1E-83 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VAA_02506 c5eeeb5180353ea591b129b185542e44 193 Pfam PF02397 Bacterial sugar transferase 15 184 6.3E-51 T 13-10-2018 IPR003362 Bacterial sugar transferase VAA_02672 3412f7c8f85d290945104b2a0c3cd676 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 13-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02672 3412f7c8f85d290945104b2a0c3cd676 100 Pfam PF00276 Ribosomal protein L23 9 95 2.4E-31 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VAA_02672 3412f7c8f85d290945104b2a0c3cd676 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.479 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VAA_02672 3412f7c8f85d290945104b2a0c3cd676 100 Gene3D G3DSA:3.30.70.330 1 100 4.9E-38 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VAA_02672 3412f7c8f85d290945104b2a0c3cd676 100 SUPERFAMILY SSF54189 6 97 2.34E-32 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_02505 7016cf5f6c23980f40ac398b65c2ae0e 316 SUPERFAMILY SSF51735 2 314 5.55E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02505 7016cf5f6c23980f40ac398b65c2ae0e 316 Gene3D G3DSA:3.40.50.720 1 311 1.3E-58 T 13-10-2018 VAA_02505 7016cf5f6c23980f40ac398b65c2ae0e 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 4.2E-30 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 Gene3D G3DSA:3.10.20.30 1 105 8.0E-32 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 Gene3D G3DSA:1.10.1060.10 106 237 2.4E-57 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 SUPERFAMILY SSF54292 1 105 4.01E-29 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 110 7.8E-29 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 SUPERFAMILY SSF46548 106 234 2.27E-40 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 229 2.9E-86 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_03412 eaafe8316c39e7856fab9509fa37040a 237 Pfam PF13534 4Fe-4S dicluster domain 147 220 1.4E-10 T 13-10-2018 VAA_01829 a0fb0b78e413566d89a68195c523e2ef 406 Pfam PF00909 Ammonium Transporter Family 23 401 8.1E-89 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VAA_01829 a0fb0b78e413566d89a68195c523e2ef 406 Gene3D G3DSA:1.10.3430.10 2 406 1.5E-102 T 13-10-2018 IPR029020 Ammonium/urea transporter VAA_01829 a0fb0b78e413566d89a68195c523e2ef 406 SUPERFAMILY SSF111352 17 383 1.7E-95 T 13-10-2018 VAA_01829 a0fb0b78e413566d89a68195c523e2ef 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VAA_00229 43c7ebb6bfa159b4041803b2748d601a 119 Gene3D G3DSA:3.10.180.10 6 118 8.3E-18 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_00229 43c7ebb6bfa159b4041803b2748d601a 119 SUPERFAMILY SSF54593 6 115 4.68E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_00201 943c099db57d0f0a50f82378eff39e53 275 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 237 273 9.4E-9 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VAA_00201 943c099db57d0f0a50f82378eff39e53 275 SUPERFAMILY SSF52980 107 218 5.18E-29 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_00201 943c099db57d0f0a50f82378eff39e53 275 Pfam PF04471 Restriction endonuclease 104 214 3.3E-28 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VAA_00201 943c099db57d0f0a50f82378eff39e53 275 SUPERFAMILY SSF57783 233 272 8.33E-6 T 13-10-2018 VAA_00201 943c099db57d0f0a50f82378eff39e53 275 Gene3D G3DSA:3.40.1350.10 107 218 3.0E-13 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VAA_00294 06c8c1823435035a6f104391218c6688 585 SUPERFAMILY SSF69593 56 248 9.55E-7 T 13-10-2018 VAA_00294 06c8c1823435035a6f104391218c6688 585 SUPERFAMILY SSF55729 313 480 1.96E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00294 06c8c1823435035a6f104391218c6688 585 Pfam PF01553 Acyltransferase 67 196 1.1E-4 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_00294 06c8c1823435035a6f104391218c6688 585 Gene3D G3DSA:3.40.630.30 314 457 5.8E-7 T 13-10-2018 VAA_00294 06c8c1823435035a6f104391218c6688 585 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 4.8E-21 T 13-10-2018 VAA_00294 06c8c1823435035a6f104391218c6688 585 SMART SM00563 75 199 6.3E-7 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_03523 943f8cd7c58e0beda01ebcda2600de57 131 PIRSF PIRSF002889 1 131 1.6E-33 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VAA_03523 943f8cd7c58e0beda01ebcda2600de57 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 1.7E-28 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VAA_03397 eab4492865233cf8783680aabb7059d1 142 SUPERFAMILY SSF54197 3 133 4.89E-34 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03397 eab4492865233cf8783680aabb7059d1 142 Gene3D G3DSA:3.30.428.10 1 141 2.0E-42 T 13-10-2018 IPR036265 HIT-like superfamily VAA_03397 eab4492865233cf8783680aabb7059d1 142 PIRSF PIRSF000714 2 139 3.3E-52 T 13-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VAA_03397 eab4492865233cf8783680aabb7059d1 142 Pfam PF01230 HIT domain 11 99 3.0E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VAA_01360 cb94b7c6de2e292e3bb54572e59c5ee1 350 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 340 1.1E-87 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VAA_01360 cb94b7c6de2e292e3bb54572e59c5ee1 350 Gene3D G3DSA:2.130.10.10 6 345 3.5E-82 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_01360 cb94b7c6de2e292e3bb54572e59c5ee1 350 SUPERFAMILY SSF51004 31 341 6.15E-29 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VAA_01867 bad48792e3eec07cdc21e989312c7591 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 7.3E-29 T 13-10-2018 IPR021363 Protein of unknown function DUF2835 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 SUPERFAMILY SSF103473 12 459 1.27E-60 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 Pfam PF07690 Major Facilitator Superfamily 19 398 3.7E-48 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 389 408 1.2E-7 T 13-10-2018 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.2E-7 T 13-10-2018 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.2E-7 T 13-10-2018 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.2E-7 T 13-10-2018 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 Gene3D G3DSA:1.20.1250.20 253 461 9.9E-22 T 13-10-2018 VAA_01468 c2ec87be4353bb750bb0e1b1df49fcb7 467 Gene3D G3DSA:1.20.1720.10 15 247 1.7E-47 T 13-10-2018 VAA_02722 4d891f2120a780a1023ec780d0794ea9 570 Gene3D G3DSA:3.10.20.310 97 184 4.5E-28 T 13-10-2018 VAA_02722 4d891f2120a780a1023ec780d0794ea9 570 Gene3D G3DSA:2.40.160.50 262 570 3.7E-96 T 13-10-2018 VAA_02722 4d891f2120a780a1023ec780d0794ea9 570 Gene3D G3DSA:3.10.20.310 185 261 8.3E-17 T 13-10-2018 VAA_02722 4d891f2120a780a1023ec780d0794ea9 570 Gene3D G3DSA:3.10.20.310 20 96 6.6E-23 T 13-10-2018 VAA_02722 4d891f2120a780a1023ec780d0794ea9 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 1.3E-18 T 13-10-2018 IPR035243 TamA, POTRA domain 1 VAA_02722 4d891f2120a780a1023ec780d0794ea9 570 Pfam PF01103 Surface antigen 279 567 3.5E-27 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VAA_02275 f0d81bf0eab50a3aac2b05fe4bd140f5 156 Gene3D G3DSA:3.10.450.50 20 141 8.3E-21 T 13-10-2018 VAA_02275 f0d81bf0eab50a3aac2b05fe4bd140f5 156 SUPERFAMILY SSF54427 21 142 6.88E-23 T 13-10-2018 IPR032710 NTF2-like domain superfamily VAA_02275 f0d81bf0eab50a3aac2b05fe4bd140f5 156 Pfam PF12680 SnoaL-like domain 23 125 1.3E-12 T 13-10-2018 IPR037401 SnoaL-like domain VAA_04068 605b034d19afc50211b6cd8bc345a47f 99 SUPERFAMILY SSF160113 50 96 2.49E-17 T 13-10-2018 IPR036913 YegP-like superfamily VAA_04068 605b034d19afc50211b6cd8bc345a47f 99 Gene3D G3DSA:2.30.29.80 39 96 1.9E-18 T 13-10-2018 VAA_04068 605b034d19afc50211b6cd8bc345a47f 99 Pfam PF07411 Domain of unknown function (DUF1508) 51 92 6.3E-21 T 13-10-2018 IPR010879 Domain of unknown function DUF1508 VAA_01661 0ff69228c94d8ef4ab2ba6370ce2e0b7 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 2.8E-48 T 13-10-2018 IPR025218 Domain of unknown function DUF4426 VAA_01661 0ff69228c94d8ef4ab2ba6370ce2e0b7 143 Gene3D G3DSA:2.60.40.3340 14 143 6.7E-39 T 13-10-2018 VAA_02014 5336369b1d744a3d325e177a6323b373 187 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 38 181 9.8E-20 T 13-10-2018 IPR009936 Protein of unknown function DUF1468 VAA_00812 4089211de4d0ea8003819a68264d8482 296 Pfam PF01136 Peptidase family U32 85 210 4.6E-13 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VAA_00104 efd53c8ac5bba4a5ccfd639809fc77fc 177 SUPERFAMILY SSF55729 88 160 6.85E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00104 efd53c8ac5bba4a5ccfd639809fc77fc 177 Pfam PF13508 Acetyltransferase (GNAT) domain 96 153 2.8E-6 T 13-10-2018 IPR000182 GNAT domain VAA_00104 efd53c8ac5bba4a5ccfd639809fc77fc 177 Gene3D G3DSA:3.40.630.30 4 169 1.1E-41 T 13-10-2018 VAA_01042 ff85b6fbd334233db698fc343626a7a7 427 Gene3D G3DSA:1.20.58.370 63 159 4.3E-6 T 13-10-2018 IPR035277 MalF, N-terminal VAA_01042 ff85b6fbd334233db698fc343626a7a7 427 SUPERFAMILY SSF160964 122 179 7.72E-13 T 13-10-2018 VAA_01042 ff85b6fbd334233db698fc343626a7a7 427 Gene3D G3DSA:1.10.3720.10 171 425 1.3E-62 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01042 ff85b6fbd334233db698fc343626a7a7 427 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 212 413 1.2E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01042 ff85b6fbd334233db698fc343626a7a7 427 SUPERFAMILY SSF161098 175 411 1.31E-54 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02498 95a2942185bb487ab60ca663bd4ea8e4 132 Gene3D G3DSA:2.60.120.10 1 132 1.3E-53 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VAA_02498 95a2942185bb487ab60ca663bd4ea8e4 132 Pfam PF05523 WxcM-like, C-terminal 1 130 4.8E-54 T 13-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 VAA_02498 95a2942185bb487ab60ca663bd4ea8e4 132 SUPERFAMILY SSF51182 2 131 4.33E-45 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VAA_01980 5458e73f0f03606e4969851504e1a56f 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VAA_01980 5458e73f0f03606e4969851504e1a56f 92 SUPERFAMILY SSF54292 3 80 2.1E-18 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VAA_01980 5458e73f0f03606e4969851504e1a56f 92 Gene3D G3DSA:3.10.20.30 1 85 8.7E-17 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VAA_01980 5458e73f0f03606e4969851504e1a56f 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 74 1.5E-9 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VAA_02072 07b6d637000a689e69506998498b3625 99 SUPERFAMILY SSF53335 13 95 3.42E-11 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02072 07b6d637000a689e69506998498b3625 99 Gene3D G3DSA:3.40.50.150 4 99 1.6E-20 T 13-10-2018 VAA_03426 5c2fbb2e429025c4a270e0dfe08228d4 148 Pfam PF03788 LrgA family 27 120 1.2E-27 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 VAA_03800 c4738abc983e4422f1c416d8443b59b7 177 Pfam PF01569 PAP2 superfamily 66 174 9.0E-20 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAA_03800 c4738abc983e4422f1c416d8443b59b7 177 SUPERFAMILY SSF48317 7 175 1.83E-36 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VAA_03800 c4738abc983e4422f1c416d8443b59b7 177 Gene3D G3DSA:1.20.144.10 89 177 8.1E-20 T 13-10-2018 VAA_03800 c4738abc983e4422f1c416d8443b59b7 177 SMART SM00014 64 170 3.6E-8 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAA_00322 d0378d22da01683c132faf76b438daf3 120 Pfam PF02303 Helix-destabilising protein 30 112 4.9E-37 T 13-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VAA_00322 d0378d22da01683c132faf76b438daf3 120 Gene3D G3DSA:2.40.50.140 29 117 9.5E-30 T 13-10-2018 VAA_00322 d0378d22da01683c132faf76b438daf3 120 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 49 113 4.0E-19 T 13-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VAA_00322 d0378d22da01683c132faf76b438daf3 120 SUPERFAMILY SSF50249 29 113 3.43E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00345 aa0b994b88121e5e732e1e723bb6261a 320 SUPERFAMILY SSF64182 4 318 1.1E-40 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VAA_01709 a12a68b0789c410234de75477b29f8ee 142 SUPERFAMILY SSF89946 9 126 3.4E-38 T 13-10-2018 IPR036701 RraB-like superfamily VAA_01709 a12a68b0789c410234de75477b29f8ee 142 Pfam PF06877 Regulator of ribonuclease activity B 21 122 4.5E-33 T 13-10-2018 IPR009671 Regulator of ribonuclease activity B domain VAA_01709 a12a68b0789c410234de75477b29f8ee 142 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 13 126 28.888 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B VAA_01709 a12a68b0789c410234de75477b29f8ee 142 PIRSF PIRSF018193 10 142 2.1E-57 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B VAA_01709 a12a68b0789c410234de75477b29f8ee 142 Gene3D G3DSA:3.30.70.970 3 134 7.0E-56 T 13-10-2018 IPR036701 RraB-like superfamily VAA_01012 798a7d14d45ec42d3370ea06d341287d 393 Gene3D G3DSA:3.90.1150.10 21 382 3.8E-144 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_01012 798a7d14d45ec42d3370ea06d341287d 393 SUPERFAMILY SSF53383 30 385 2.42E-75 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01012 798a7d14d45ec42d3370ea06d341287d 393 Pfam PF00155 Aminotransferase class I and II 44 378 2.4E-35 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_01012 798a7d14d45ec42d3370ea06d341287d 393 Gene3D G3DSA:3.40.640.10 59 290 3.8E-144 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00574 9403781d3021592037cc5323270e07d2 135 Pfam PF02416 mttA/Hcf106 family 4 34 1.4E-5 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VAA_00574 9403781d3021592037cc5323270e07d2 135 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 9.2E-34 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VAA_00574 9403781d3021592037cc5323270e07d2 135 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 133 18.508 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VAA_00574 9403781d3021592037cc5323270e07d2 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.7E-26 T 13-10-2018 VAA_00574 9403781d3021592037cc5323270e07d2 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.7E-26 T 13-10-2018 VAA_00574 9403781d3021592037cc5323270e07d2 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.7E-26 T 13-10-2018 VAA_01964 d4a2d7467a199f0b5b391af9f04778a0 210 PIRSF PIRSF006324 5 210 5.5E-57 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_01964 d4a2d7467a199f0b5b391af9f04778a0 210 Pfam PF01810 LysE type translocator 20 207 8.5E-38 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_00414 c4f0c3a1383f465f3fbd8158dcdce68c 143 Gene3D G3DSA:2.40.10.330 72 128 2.2E-40 T 13-10-2018 VAA_00414 c4f0c3a1383f465f3fbd8158dcdce68c 143 Gene3D G3DSA:3.10.50.40 13 140 2.2E-40 T 13-10-2018 VAA_00414 c4f0c3a1383f465f3fbd8158dcdce68c 143 SUPERFAMILY SSF54534 4 142 2.36E-36 T 13-10-2018 VAA_00414 c4f0c3a1383f465f3fbd8158dcdce68c 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 2.0E-12 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VAA_00171 f225b35228fdbd2d365fe4ce53c95556 169 Gene3D G3DSA:3.40.50.300 1 144 7.9E-12 T 13-10-2018 VAA_00171 f225b35228fdbd2d365fe4ce53c95556 169 SUPERFAMILY SSF52540 2 117 1.72E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 13-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 SUPERFAMILY SSF54980 139 204 1.41E-8 T 13-10-2018 IPR035647 EF-G domain III/V-like VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 Gene3D G3DSA:3.30.230.30 2 136 1.6E-48 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 2.4E-25 T 13-10-2018 IPR001498 Impact, N-terminal VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.9E-9 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 204 3.1E-66 T 13-10-2018 IPR015796 Impact family, bacterial/archaeal VAA_00817 595609aaaba39990969b2a4fafaa4b7b 207 SUPERFAMILY SSF54211 5 134 1.82E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VAA_02860 0efc912fc83d6c86cee071149b5b8313 446 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 446 8.2E-55 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAA_02860 0efc912fc83d6c86cee071149b5b8313 446 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 28 446 8.3E-110 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAA_02860 0efc912fc83d6c86cee071149b5b8313 446 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 396 412 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VAA_02546 3ee633c7771bdf924266317bec63e646 149 PIRSF PIRSF001399 3 149 4.2E-59 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_02546 3ee633c7771bdf924266317bec63e646 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.024 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_02546 3ee633c7771bdf924266317bec63e646 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 9.3E-65 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_02546 3ee633c7771bdf924266317bec63e646 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_02546 3ee633c7771bdf924266317bec63e646 149 Pfam PF01220 Dehydroquinase class II 6 142 1.5E-61 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_02546 3ee633c7771bdf924266317bec63e646 149 SUPERFAMILY SSF52304 4 145 1.7E-61 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_02546 3ee633c7771bdf924266317bec63e646 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 137 5.0E-58 T 13-10-2018 VAA_02546 3ee633c7771bdf924266317bec63e646 149 Gene3D G3DSA:3.40.50.9100 1 149 1.2E-66 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VAA_01463 4c25e553483948b8e53c5afe3a0a11eb 168 Gene3D G3DSA:1.10.3680.10 22 160 5.2E-19 T 13-10-2018 IPR029024 TerB-like VAA_01463 4c25e553483948b8e53c5afe3a0a11eb 168 Pfam PF05099 Tellurite resistance protein TerB 28 164 1.2E-35 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VAA_01463 4c25e553483948b8e53c5afe3a0a11eb 168 SUPERFAMILY SSF158682 19 166 2.22E-29 T 13-10-2018 IPR029024 TerB-like VAA_03643 b2bf821911f49a6dfa1aee903498fb37 371 Pfam PF11814 Peptidase_C39 like family 157 359 1.1E-77 T 13-10-2018 IPR021770 Protein of unknown function DUF3335 VAA_03643 b2bf821911f49a6dfa1aee903498fb37 371 SUPERFAMILY SSF55729 2 151 4.15E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_03643 b2bf821911f49a6dfa1aee903498fb37 371 Gene3D G3DSA:3.40.630.30 1 149 1.4E-30 T 13-10-2018 VAA_03643 b2bf821911f49a6dfa1aee903498fb37 371 Pfam PF00583 Acetyltransferase (GNAT) family 32 123 2.6E-18 T 13-10-2018 IPR000182 GNAT domain VAA_02415 0db166930abd49957cc0dcc1fab7ee7f 305 TIGRFAM TIGR00688 rarD: protein RarD 11 264 1.9E-84 T 13-10-2018 IPR004626 RarD protein GO:0005887 VAA_02415 0db166930abd49957cc0dcc1fab7ee7f 305 SUPERFAMILY SSF103481 50 146 1.83E-13 T 13-10-2018 VAA_02415 0db166930abd49957cc0dcc1fab7ee7f 305 Pfam PF00892 EamA-like transporter family 12 145 5.3E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_02415 0db166930abd49957cc0dcc1fab7ee7f 305 SUPERFAMILY SSF103481 189 291 5.36E-9 T 13-10-2018 VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 TIGRFAM TIGR01321 TrpR: trp operon repressor 7 88 1.3E-25 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 Pfam PF01371 Trp repressor protein 9 93 9.6E-31 T 13-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 PIRSF PIRSF003196 1 99 2.1E-37 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 Gene3D G3DSA:1.10.1270.10 2 99 1.1E-33 T 13-10-2018 IPR038116 TrpR-like superfamily VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 SUPERFAMILY SSF48295 3 96 1.88E-28 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 81 3.0E-32 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAA_00429 6c08dbcb9b4206c82660999301099ab6 99 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 22.61 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VAA_01979 c4d22eac00b1153253480cbc479a02eb 391 Pfam PF00268 Ribonucleotide reductase, small chain 48 347 3.5E-48 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAA_01979 c4d22eac00b1153253480cbc479a02eb 391 SUPERFAMILY SSF47240 17 355 1.02E-110 T 13-10-2018 IPR009078 Ferritin-like superfamily VAA_01979 c4d22eac00b1153253480cbc479a02eb 391 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 129 145 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VAA_01979 c4d22eac00b1153253480cbc479a02eb 391 Gene3D G3DSA:1.10.620.20 16 355 2.1E-143 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VAA_02131 f1421b668d56cf99a3cdefff8fdd6d68 80 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 4 77 1.3E-33 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VAA_02131 f1421b668d56cf99a3cdefff8fdd6d68 80 Pfam PF06667 Phage shock protein B 6 77 1.6E-32 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VAA_00153 346e7ca919fc6316412e39b080041f5f 158 Gene3D G3DSA:2.40.128.270 50 153 2.1E-31 T 13-10-2018 IPR038670 HslJ-like superfamily VAA_00153 346e7ca919fc6316412e39b080041f5f 158 Pfam PF03724 META domain 44 150 4.2E-29 T 13-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VAA_00754 85be2c30675bf2bc6325ee95a14af943 70 Gene3D G3DSA:3.40.50.620 1 70 5.8E-18 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_00754 85be2c30675bf2bc6325ee95a14af943 70 SUPERFAMILY SSF52374 1 64 7.87E-5 T 13-10-2018 VAA_04306 793db1399033c2c6cb387ce91d1b515a 81 Pfam PF11869 Protein of unknown function (DUF3389) 5 80 1.4E-33 T 13-10-2018 IPR021811 Protein of unknown function DUF3389 VAA_00885 8fa28837976bca986c3db553fadf63ec 169 PIRSF PIRSF003174 9 167 3.0E-48 T 13-10-2018 IPR010292 Uncharacterised protein family CreA VAA_00885 8fa28837976bca986c3db553fadf63ec 169 Pfam PF05981 CreA protein 35 157 1.9E-44 T 13-10-2018 IPR010292 Uncharacterised protein family CreA VAA_00243 4e7745b0fae183639b06fc04582d604e 354 SUPERFAMILY SSF58100 73 330 2.28E-6 T 13-10-2018 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 SUPERFAMILY SSF46689 170 219 2.08E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 Gene3D G3DSA:1.10.10.60 228 270 5.3E-12 T 13-10-2018 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 Gene3D G3DSA:1.10.10.60 172 227 2.2E-16 T 13-10-2018 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 Pfam PF02311 AraC-like ligand binding domain 16 146 8.4E-23 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 SUPERFAMILY SSF51215 27 146 4.84E-16 T 13-10-2018 IPR037923 Transcription regulator HTH-like VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 SMART SM00342 185 267 1.0E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 SUPERFAMILY SSF46689 221 268 1.15E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02414 518ccd3ed1f7a93a1c6095594bdbc5b9 271 Pfam PF12833 Helix-turn-helix domain 191 267 8.7E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VAA_03299 5de88cdbea872ecdcd97740a3fdbae34 161 Gene3D G3DSA:3.10.180.10 1 159 5.4E-25 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_03299 5de88cdbea872ecdcd97740a3fdbae34 161 SUPERFAMILY SSF54593 1 153 2.01E-26 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VAA_03299 5de88cdbea872ecdcd97740a3fdbae34 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 3.1E-16 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VAA_03299 5de88cdbea872ecdcd97740a3fdbae34 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VAA_01544 b748b84e1d615d33aca939ad6f4659fb 107 Pfam PF01541 GIY-YIG catalytic domain 12 82 1.6E-11 T 13-10-2018 IPR000305 GIY-YIG endonuclease VAA_01544 b748b84e1d615d33aca939ad6f4659fb 107 Gene3D G3DSA:3.40.1440.10 6 103 1.9E-26 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAA_01544 b748b84e1d615d33aca939ad6f4659fb 107 SUPERFAMILY SSF82771 12 80 3.79E-10 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.738 T 13-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 Gene3D G3DSA:3.20.20.70 15 258 3.5E-77 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 2.3E-131 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 PIRSF PIRSF006621 9 330 3.2E-101 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 SUPERFAMILY SSF51395 19 328 2.2E-89 T 13-10-2018 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 314 1.7E-109 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VAA_02541 c29c277774ef8843d8da91a6bdb93118 331 Gene3D G3DSA:1.10.1200.80 261 331 5.2E-7 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VAA_03347 00b79d9b48e04ba287f0d0084d1d7548 56 SUPERFAMILY SSF57829 2 55 1.16E-17 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VAA_03347 00b79d9b48e04ba287f0d0084d1d7548 56 Pfam PF01783 Ribosomal L32p protein family 2 56 8.3E-20 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03347 00b79d9b48e04ba287f0d0084d1d7548 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.4E-19 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03347 00b79d9b48e04ba287f0d0084d1d7548 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.034 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03438 331ba931e319e789fdc27654b2d0b900 214 Pfam PF03458 UPF0126 domain 12 83 4.6E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VAA_03438 331ba931e319e789fdc27654b2d0b900 214 Pfam PF03458 UPF0126 domain 99 170 5.4E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VAA_02802 2cd05c5eb4c8cd151aa31dffd736d2d9 254 SMART SM00052 6 249 3.2E-19 T 13-10-2018 IPR001633 EAL domain VAA_02802 2cd05c5eb4c8cd151aa31dffd736d2d9 254 SUPERFAMILY SSF141868 27 244 9.55E-58 T 13-10-2018 IPR035919 EAL domain superfamily VAA_02802 2cd05c5eb4c8cd151aa31dffd736d2d9 254 Pfam PF00563 EAL domain 28 244 5.4E-46 T 13-10-2018 IPR001633 EAL domain VAA_02802 2cd05c5eb4c8cd151aa31dffd736d2d9 254 Gene3D G3DSA:3.20.20.450 2 253 1.7E-62 T 13-10-2018 IPR035919 EAL domain superfamily VAA_00145 394d458eb3c0e76053ae425947944eb8 306 SUPERFAMILY SSF53474 17 256 5.78E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_00145 394d458eb3c0e76053ae425947944eb8 306 Pfam PF07819 PGAP1-like protein 96 178 6.5E-7 T 13-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 VAA_00145 394d458eb3c0e76053ae425947944eb8 306 Gene3D G3DSA:3.40.50.1820 19 261 9.0E-17 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02108 003e9966b76f0864813d754fe50503ee 305 Hamap MF_00323 Ferrochelatase [hemH]. 1 305 32.076 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAA_02108 003e9966b76f0864813d754fe50503ee 305 Gene3D G3DSA:3.40.50.1400 150 288 1.3E-86 T 13-10-2018 VAA_02108 003e9966b76f0864813d754fe50503ee 305 Pfam PF00762 Ferrochelatase 1 304 1.2E-100 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAA_02108 003e9966b76f0864813d754fe50503ee 305 SUPERFAMILY SSF53800 1 304 6.54E-94 T 13-10-2018 VAA_02108 003e9966b76f0864813d754fe50503ee 305 ProSitePatterns PS00534 Ferrochelatase signature. 176 194 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAA_02108 003e9966b76f0864813d754fe50503ee 305 Gene3D G3DSA:3.40.50.1400 1 304 1.3E-86 T 13-10-2018 VAA_02108 003e9966b76f0864813d754fe50503ee 305 TIGRFAM TIGR00109 hemH: ferrochelatase 1 304 2.6E-96 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VAA_03459 ce48e9ee0592fe8934d8ab76a41d3b26 109 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 109 6.5E-30 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAA_03459 ce48e9ee0592fe8934d8ab76a41d3b26 109 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 109 16.89 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAA_03459 ce48e9ee0592fe8934d8ab76a41d3b26 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 73 89 5.2E-13 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAA_03459 ce48e9ee0592fe8934d8ab76a41d3b26 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 5.2E-13 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAA_03459 ce48e9ee0592fe8934d8ab76a41d3b26 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 94 107 5.2E-13 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAA_03459 ce48e9ee0592fe8934d8ab76a41d3b26 109 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 22 108 4.0E-19 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VAA_01150 c55b1ad28fc1249bdcf0605d81e51a38 258 PIRSF PIRSF029037 1 258 4.0E-114 T 13-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VAA_01150 c55b1ad28fc1249bdcf0605d81e51a38 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 4.4E-113 T 13-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VAA_01178 23a521df567f2a27c4ab20a604f921ad 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.46 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 VAA_01178 23a521df567f2a27c4ab20a604f921ad 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-25 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 VAA_01178 23a521df567f2a27c4ab20a604f921ad 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.1E-36 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 VAA_01937 53312fc088fe125a50bade8cb8cb1df0 120 Gene3D G3DSA:3.30.1370.150 61 120 1.2E-30 T 13-10-2018 VAA_01937 53312fc088fe125a50bade8cb8cb1df0 120 Pfam PF10928 Protein of unknown function (DUF2810) 67 118 1.2E-31 T 13-10-2018 IPR021230 Protein of unknown function DUF2810 VAA_01930 db3b467dd8a0afafd507ca071ead369c 632 Pfam PF12793 Sugar transport-related sRNA regulator N-term 53 166 4.2E-31 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VAA_01930 db3b467dd8a0afafd507ca071ead369c 632 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 211 358 2.2E-19 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VAA_01930 db3b467dd8a0afafd507ca071ead369c 632 SUPERFAMILY SSF53850 164 630 2.71E-49 T 13-10-2018 VAA_01930 db3b467dd8a0afafd507ca071ead369c 632 Gene3D G3DSA:3.40.190.10 168 365 7.4E-27 T 13-10-2018 VAA_00703 b68e16ba49ad2e7cde98a895751b65ec 163 SUPERFAMILY SSF142433 5 159 6.93E-54 T 13-10-2018 IPR036653 CinA-like, C-terminal VAA_00703 b68e16ba49ad2e7cde98a895751b65ec 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 155 1.0E-48 T 13-10-2018 IPR008136 CinA, C-terminal VAA_00703 b68e16ba49ad2e7cde98a895751b65ec 163 Gene3D G3DSA:3.90.950.20 1 159 5.5E-56 T 13-10-2018 IPR036653 CinA-like, C-terminal VAA_00703 b68e16ba49ad2e7cde98a895751b65ec 163 Pfam PF02464 Competence-damaged protein 7 158 3.4E-56 T 13-10-2018 IPR008136 CinA, C-terminal VAA_01170 5ea36af71223af9eed13672856c48b46 170 Pfam PF13302 Acetyltransferase (GNAT) domain 10 141 6.6E-18 T 13-10-2018 IPR000182 GNAT domain VAA_01170 5ea36af71223af9eed13672856c48b46 170 SUPERFAMILY SSF55729 3 149 2.05E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_01170 5ea36af71223af9eed13672856c48b46 170 Gene3D G3DSA:3.40.630.30 3 151 2.8E-22 T 13-10-2018 VAA_02250 382a85073bc0810211800dec483ea6a9 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 20 266 3.9E-97 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VAA_02250 382a85073bc0810211800dec483ea6a9 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 18 269 35.079 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VAA_02250 382a85073bc0810211800dec483ea6a9 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 65 83 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VAA_02250 382a85073bc0810211800dec483ea6a9 469 SUPERFAMILY SSF51366 16 266 4.94E-82 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02250 382a85073bc0810211800dec483ea6a9 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 270 469 29.908 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VAA_02250 382a85073bc0810211800dec483ea6a9 469 Gene3D G3DSA:3.20.20.70 23 270 2.2E-177 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02250 382a85073bc0810211800dec483ea6a9 469 SUPERFAMILY SSF51366 272 467 7.38E-55 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VAA_02250 382a85073bc0810211800dec483ea6a9 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 272 464 2.4E-55 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VAA_02250 382a85073bc0810211800dec483ea6a9 469 Gene3D G3DSA:3.20.20.70 271 462 2.2E-177 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 1.2E-19 T 13-10-2018 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 320 1.2E-19 T 13-10-2018 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 1.2E-19 T 13-10-2018 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 178 1.2E-19 T 13-10-2018 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 Gene3D G3DSA:1.20.1260.30 1 136 1.0E-47 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 Gene3D G3DSA:3.40.50.150 137 419 2.0E-79 T 13-10-2018 VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 Pfam PF12161 HsdM N-terminal domain 4 130 9.2E-16 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 SUPERFAMILY SSF53335 3 415 1.28E-111 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_00190 3e8ab1df1d240dbef2297787ccf5ae67 420 Pfam PF02384 N-6 DNA Methylase 140 414 8.1E-86 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 SUPERFAMILY SSF54373 270 360 3.66E-18 T 13-10-2018 VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.522 T 13-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 Gene3D G3DSA:3.50.50.60 109 399 9.9E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 Gene3D G3DSA:3.50.50.60 1 76 8.1E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 Gene3D G3DSA:3.30.9.10 134 359 9.9E-54 T 13-10-2018 VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 Pfam PF01266 FAD dependent oxidoreductase 2 398 1.1E-72 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VAA_00494 7126649ff2f224fbcc4a60b9a57c5edf 419 SUPERFAMILY SSF51905 1 416 1.42E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VAA_00454 83efbcab5a579c240c29177a322d7467 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 2.5E-119 T 13-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VAA_00454 83efbcab5a579c240c29177a322d7467 277 Gene3D G3DSA:1.20.1540.10 90 276 2.1E-51 T 13-10-2018 IPR035952 Rhomboid-like superfamily VAA_00454 83efbcab5a579c240c29177a322d7467 277 Pfam PF01694 Rhomboid family 134 268 1.6E-31 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VAA_00454 83efbcab5a579c240c29177a322d7467 277 Gene3D G3DSA:3.30.70.2350 1 70 2.1E-26 T 13-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VAA_00454 83efbcab5a579c240c29177a322d7467 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 3.7E-32 T 13-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VAA_00454 83efbcab5a579c240c29177a322d7467 277 SUPERFAMILY SSF144091 96 269 1.83E-40 T 13-10-2018 VAA_00749 da621c48ec5d69f8cba21c8c96eb0616 154 SUPERFAMILY SSF56925 8 154 9.68E-17 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAA_00749 da621c48ec5d69f8cba21c8c96eb0616 154 Gene3D G3DSA:2.40.160.20 3 154 3.2E-17 T 13-10-2018 VAA_00749 da621c48ec5d69f8cba21c8c96eb0616 154 Pfam PF13505 Outer membrane protein beta-barrel domain 13 154 1.1E-10 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VAA_01662 8cbc37c98f407d332a5ce0e098fa044a 199 SUPERFAMILY SSF52972 1 195 2.88E-73 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_01662 8cbc37c98f407d332a5ce0e098fa044a 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 49.929 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VAA_01662 8cbc37c98f407d332a5ce0e098fa044a 199 Pfam PF01725 Ham1 family 4 192 1.9E-55 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VAA_01662 8cbc37c98f407d332a5ce0e098fa044a 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 6.0E-66 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VAA_01662 8cbc37c98f407d332a5ce0e098fa044a 199 Gene3D G3DSA:3.90.950.10 1 199 1.7E-81 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VAA_01229 c0a5bd1901e74934e291b30dfce154e3 198 Pfam PF11726 Inovirus Gp2 35 196 4.8E-26 T 13-10-2018 VAA_03361 a67672314d505e4ff23df4bef84c4388 601 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.9E-97 T 13-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VAA_03361 a67672314d505e4ff23df4bef84c4388 601 Gene3D G3DSA:3.40.720.10 252 524 1.6E-39 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_03361 a67672314d505e4ff23df4bef84c4388 601 PIRSF PIRSF004950 6 599 3.6E-237 T 13-10-2018 IPR012159 Inner membrane protein YejM VAA_03361 a67672314d505e4ff23df4bef84c4388 601 Pfam PF00884 Sulfatase 276 514 4.0E-26 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAA_03361 a67672314d505e4ff23df4bef84c4388 601 SUPERFAMILY SSF53649 256 565 1.35E-49 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_02606 7ca70e9b3b6928a92332861ff06ce245 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 3.0E-58 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAA_02606 7ca70e9b3b6928a92332861ff06ce245 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.558 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAA_02606 7ca70e9b3b6928a92332861ff06ce245 125 PIRSF PIRSF000179 6 125 7.0E-56 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAA_02606 7ca70e9b3b6928a92332861ff06ce245 125 Gene3D G3DSA:1.20.1300.10 6 125 1.3E-44 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02606 7ca70e9b3b6928a92332861ff06ce245 125 Pfam PF02313 Fumarate reductase subunit D 11 123 3.0E-44 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VAA_02606 7ca70e9b3b6928a92332861ff06ce245 125 SUPERFAMILY SSF81343 7 125 1.33E-50 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VAA_02842 b809b77b7f15965977616873ee32be88 258 Gene3D G3DSA:1.25.40.590 35 194 1.1E-59 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VAA_02842 b809b77b7f15965977616873ee32be88 258 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 38 247 2.7E-70 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VAA_02842 b809b77b7f15965977616873ee32be88 258 Pfam PF09850 Type VI secretion system protein DotU 40 241 2.2E-63 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VAA_03316 1ebd8a7d007be3078077002519818c8a 243 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 2 241 34.096 T 13-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VAA_03316 1ebd8a7d007be3078077002519818c8a 243 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 1 240 3.5E-81 T 13-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VAA_03316 1ebd8a7d007be3078077002519818c8a 243 Pfam PF12697 Alpha/beta hydrolase family 2 234 2.3E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_03316 1ebd8a7d007be3078077002519818c8a 243 Gene3D G3DSA:3.40.50.1820 1 242 5.0E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03316 1ebd8a7d007be3078077002519818c8a 243 SUPERFAMILY SSF53474 1 242 3.92E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03247 dd6713fc838dc6b3310eb06a386b0ec9 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 71 1.9E-13 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAA_03247 dd6713fc838dc6b3310eb06a386b0ec9 302 Gene3D G3DSA:1.10.3720.10 97 298 3.4E-20 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03247 dd6713fc838dc6b3310eb06a386b0ec9 302 SUPERFAMILY SSF161098 98 283 8.24E-27 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03247 dd6713fc838dc6b3310eb06a386b0ec9 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 300 1.2E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01218 b8466e021ffb2b22aa66ab92abbdbcd8 147 Pfam PF10980 Protein of unknown function (DUF2787) 16 141 3.4E-40 T 13-10-2018 IPR021248 Protein of unknown function DUF2787 VAA_01218 b8466e021ffb2b22aa66ab92abbdbcd8 147 Gene3D G3DSA:3.10.450.430 2 143 4.9E-30 T 13-10-2018 VAA_01180 cd5436e57be0ececc0949b34f6228cf0 81 Pfam PF12286 Protein of unknown function (DUF3622) 1 73 1.4E-32 T 13-10-2018 IPR022069 Protein of unknown function DUF3622 VAA_01546 6ec33c4a0af9e65db036aa52f5f9aa1c 366 SUPERFAMILY SSF53822 28 365 1.16E-82 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VAA_01546 6ec33c4a0af9e65db036aa52f5f9aa1c 366 Pfam PF13407 Periplasmic binding protein domain 70 324 7.3E-13 T 13-10-2018 IPR025997 Periplasmic binding protein VAA_01546 6ec33c4a0af9e65db036aa52f5f9aa1c 366 Gene3D G3DSA:3.40.50.2300 34 364 3.7E-143 T 13-10-2018 VAA_01546 6ec33c4a0af9e65db036aa52f5f9aa1c 366 Gene3D G3DSA:3.40.50.2300 181 360 3.7E-143 T 13-10-2018 VAA_00362 a2a2006671600b365229f9510552f078 97 Gene3D G3DSA:1.10.3830.10 1 96 2.6E-26 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_00362 a2a2006671600b365229f9510552f078 97 Pfam PF01219 Prokaryotic diacylglycerol kinase 2 93 1.8E-26 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 Gene3D G3DSA:3.40.50.720 26 248 2.6E-22 T 13-10-2018 VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 SUPERFAMILY SSF51735 32 218 2.73E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 125 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 205 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 179 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 39 56 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03370 10fa77e923a1aa4cafe2c42fb7ec3d14 255 Pfam PF00106 short chain dehydrogenase 39 217 7.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_02467 04696edb595824b959f97e2afecde34f 381 PIRSF PIRSF000390 1 379 1.5E-109 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAA_02467 04696edb595824b959f97e2afecde34f 381 Gene3D G3DSA:3.40.640.10 2 251 2.0E-80 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_02467 04696edb595824b959f97e2afecde34f 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 371 1.0E-84 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VAA_02467 04696edb595824b959f97e2afecde34f 381 Gene3D G3DSA:3.90.1150.10 252 378 7.7E-24 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VAA_02467 04696edb595824b959f97e2afecde34f 381 SUPERFAMILY SSF53383 3 379 9.32E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_02467 04696edb595824b959f97e2afecde34f 381 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 3 378 3.4E-216 T 13-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 VAA_02077 6fd408436680e6ac528810d8f1e7a5c7 64 Pfam PF03621 MbtH-like protein 5 56 2.3E-25 T 13-10-2018 IPR005153 MbtH-like domain VAA_02077 6fd408436680e6ac528810d8f1e7a5c7 64 SUPERFAMILY SSF160582 5 63 1.44E-23 T 13-10-2018 IPR038020 MbtH-like domain superfamily VAA_02077 6fd408436680e6ac528810d8f1e7a5c7 64 Gene3D G3DSA:3.90.820.10 2 64 6.3E-27 T 13-10-2018 VAA_02077 6fd408436680e6ac528810d8f1e7a5c7 64 SMART SM00923 7 57 2.5E-22 T 13-10-2018 IPR005153 MbtH-like domain VAA_01816 b912f1283ed895ad9d470e4cc34f2a34 126 Pfam PF11173 Protein of unknown function (DUF2960) 36 112 1.2E-36 T 13-10-2018 IPR021343 Protein of unknown function DUF2960 VAA_01852 c67dcd34c797aa213a2f6481c0838ccc 111 Gene3D G3DSA:1.10.10.60 46 84 2.6E-6 T 13-10-2018 VAA_00734 a111221c6b60ac0ce475a7845a12b002 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 33 174 5.4E-30 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAA_00734 a111221c6b60ac0ce475a7845a12b002 190 Gene3D G3DSA:3.40.80.10 8 189 1.0E-56 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAA_00734 a111221c6b60ac0ce475a7845a12b002 190 SUPERFAMILY SSF55846 9 186 3.8E-66 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAA_00734 a111221c6b60ac0ce475a7845a12b002 190 SMART SM00644 23 174 2.9E-56 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VAA_02259 a8e68f8c6b828b6403ac0744e52f75ae 98 Gene3D G3DSA:3.30.70.1060 1 98 4.8E-39 T 13-10-2018 VAA_02259 a8e68f8c6b828b6403ac0744e52f75ae 98 SUPERFAMILY SSF54909 1 98 5.54E-32 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_02259 a8e68f8c6b828b6403ac0744e52f75ae 98 Pfam PF03795 YCII-related domain 1 95 3.3E-29 T 13-10-2018 IPR005545 YCII-related VAA_00008 c3a38ab8e64a5462c4b9e5c6c6c5a0b5 86 SUPERFAMILY SSF141571 32 77 1.57E-10 T 13-10-2018 VAA_00008 c3a38ab8e64a5462c4b9e5c6c6c5a0b5 86 Gene3D G3DSA:2.160.20.80 27 85 4.0E-10 T 13-10-2018 VAA_00008 c3a38ab8e64a5462c4b9e5c6c6c5a0b5 86 Pfam PF00805 Pentapeptide repeats (8 copies) 38 71 7.3E-7 T 13-10-2018 IPR001646 Pentapeptide repeat VAA_01247 eb11e604037fccb350a720ffcea5c4ff 179 Gene3D G3DSA:3.10.129.10 10 178 2.5E-41 T 13-10-2018 VAA_01247 eb11e604037fccb350a720ffcea5c4ff 179 Pfam PF03061 Thioesterase superfamily 40 115 2.4E-16 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAA_01247 eb11e604037fccb350a720ffcea5c4ff 179 SUPERFAMILY SSF54637 23 172 3.74E-39 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_02100 2c2e081be83e6890b75675609b3589c6 495 Pfam PF02378 Phosphotransferase system, EIIC 11 324 8.5E-77 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VAA_02100 2c2e081be83e6890b75675609b3589c6 495 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 481 7.8E-216 T 13-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VAA_02100 2c2e081be83e6890b75675609b3589c6 495 Gene3D G3DSA:3.30.1360.60 405 486 1.1E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_02100 2c2e081be83e6890b75675609b3589c6 495 Pfam PF00367 phosphotransferase system, EIIB 412 445 8.6E-12 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_02100 2c2e081be83e6890b75675609b3589c6 495 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 423 440 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VAA_02100 2c2e081be83e6890b75675609b3589c6 495 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 470 1.6E-20 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VAA_02100 2c2e081be83e6890b75675609b3589c6 495 SUPERFAMILY SSF55604 409 482 1.16E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VAA_03621 da224fe42e78dcd8609cfbd04de43e4e 482 SUPERFAMILY SSF103473 30 457 4.71E-34 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_03621 da224fe42e78dcd8609cfbd04de43e4e 482 Gene3D G3DSA:1.20.1250.20 31 242 1.6E-9 T 13-10-2018 VAA_03621 da224fe42e78dcd8609cfbd04de43e4e 482 Pfam PF07690 Major Facilitator Superfamily 44 417 1.4E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_03621 da224fe42e78dcd8609cfbd04de43e4e 482 Gene3D G3DSA:1.20.1250.20 266 459 4.5E-8 T 13-10-2018 VAA_00283 3d5bb26e7ce394c5cbb9f5f864bf05a8 112 SMART SM00530 37 93 4.8E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00283 3d5bb26e7ce394c5cbb9f5f864bf05a8 112 Pfam PF13744 Helix-turn-helix domain 25 92 1.4E-15 T 13-10-2018 IPR039554 HigA2-like, helix-turn-helix domain VAA_00283 3d5bb26e7ce394c5cbb9f5f864bf05a8 112 Gene3D G3DSA:1.10.260.40 16 95 1.1E-17 T 13-10-2018 VAA_00283 3d5bb26e7ce394c5cbb9f5f864bf05a8 112 SUPERFAMILY SSF47413 26 92 1.15E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_01519 b9c4c9c3b829e76d81e7ac0b2e4e1956 282 SUPERFAMILY SSF161098 88 272 3.14E-38 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01519 b9c4c9c3b829e76d81e7ac0b2e4e1956 282 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 2.2E-128 T 13-10-2018 IPR017784 ABC transporter, choline, permease protein VAA_01519 b9c4c9c3b829e76d81e7ac0b2e4e1956 282 Gene3D G3DSA:1.10.3720.10 87 273 5.7E-33 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01519 b9c4c9c3b829e76d81e7ac0b2e4e1956 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 1.7E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_02052 ddb06096a483a8ccb98422cf2a1cc1a5 169 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 24 160 2.2E-16 T 13-10-2018 IPR009936 Protein of unknown function DUF1468 VAA_04309 0d5c11956c67e88db161690c68e16caa 191 SMART SM00782 9 55 5.5E-28 T 13-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VAA_04309 0d5c11956c67e88db161690c68e16caa 191 Gene3D G3DSA:2.30.30.40 122 191 1.3E-24 T 13-10-2018 VAA_04309 0d5c11956c67e88db161690c68e16caa 191 SUPERFAMILY SSF82057 120 190 5.95E-21 T 13-10-2018 VAA_04309 0d5c11956c67e88db161690c68e16caa 191 Pfam PF03831 PhnA domain 126 190 1.7E-23 T 13-10-2018 IPR013988 PhnA protein, C-terminal VAA_04309 0d5c11956c67e88db161690c68e16caa 191 Pfam PF08274 PhnA Zinc-Ribbon 16 55 1.4E-10 T 13-10-2018 IPR013987 PhnA protein, N-terminal VAA_02719 4806e816c267a52338c5cb5a8569dac1 98 Pfam PF10795 Protein of unknown function (DUF2607) 4 97 7.3E-41 T 13-10-2018 IPR019731 Protein of unknown function DUF2607 VAA_03172 5e5e09758cf40fd61986b0dea6bb8187 329 SUPERFAMILY SSF56935 25 328 3.11E-15 T 13-10-2018 VAA_03172 5e5e09758cf40fd61986b0dea6bb8187 329 Gene3D G3DSA:2.40.160.10 67 329 6.1E-9 T 13-10-2018 IPR023614 Porin domain superfamily VAA_00155 9d4c155b67b4931d481eb23f9a7b8619 573 SUPERFAMILY SSF161098 299 538 4.39E-27 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00155 9d4c155b67b4931d481eb23f9a7b8619 573 Gene3D G3DSA:1.10.3720.10 5 280 1.4E-20 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00155 9d4c155b67b4931d481eb23f9a7b8619 573 Gene3D G3DSA:1.10.3720.10 297 548 1.1E-22 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00155 9d4c155b67b4931d481eb23f9a7b8619 573 SUPERFAMILY SSF161098 6 274 1.31E-24 T 13-10-2018 IPR035906 MetI-like superfamily VAA_00291 36340f069c4b11e7a7fe20b213c35bd1 591 Gene3D G3DSA:3.90.220.20 374 583 3.8E-30 T 13-10-2018 VAA_00291 36340f069c4b11e7a7fe20b213c35bd1 591 Gene3D G3DSA:3.90.220.20 80 302 3.2E-33 T 13-10-2018 VAA_00291 36340f069c4b11e7a7fe20b213c35bd1 591 Pfam PF01420 Type I restriction modification DNA specificity domain 101 288 1.0E-12 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAA_00291 36340f069c4b11e7a7fe20b213c35bd1 591 Pfam PF01420 Type I restriction modification DNA specificity domain 397 563 2.1E-7 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VAA_00291 36340f069c4b11e7a7fe20b213c35bd1 591 SUPERFAMILY SSF116734 385 574 4.58E-29 T 13-10-2018 VAA_00291 36340f069c4b11e7a7fe20b213c35bd1 591 SUPERFAMILY SSF116734 95 356 2.45E-34 T 13-10-2018 VAA_02886 4ceb82e1f725dc2138cc41e59c20ebf7 614 Gene3D G3DSA:3.40.50.2300 517 607 1.0E-17 T 13-10-2018 VAA_02886 4ceb82e1f725dc2138cc41e59c20ebf7 614 PIRSF PIRSF037343 16 610 2.7E-280 T 13-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted VAA_02886 4ceb82e1f725dc2138cc41e59c20ebf7 614 SUPERFAMILY SSF52794 518 608 4.45E-14 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VAA_02886 4ceb82e1f725dc2138cc41e59c20ebf7 614 Pfam PF03611 PTS system sugar-specific permease component 43 443 3.1E-121 T 13-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VAA_02886 4ceb82e1f725dc2138cc41e59c20ebf7 614 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 519 591 7.6E-12 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 SUPERFAMILY SSF51445 281 629 6.76E-99 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 SUPERFAMILY SSF49303 200 284 2.53E-13 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 SUPERFAMILY SSF49785 2 186 6.29E-41 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 Gene3D G3DSA:3.20.20.80 283 627 3.6E-119 T 13-10-2018 VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 SUPERFAMILY SSF49303 737 781 3.31E-5 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 Gene3D G3DSA:2.60.120.260 3 189 1.2E-45 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 Pfam PF00703 Glycosyl hydrolases family 2 230 284 4.9E-6 T 13-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VAA_01454 46ec3845f61c396bb49f40dd18ee3b68 793 Gene3D G3DSA:2.60.40.10 190 282 6.6E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_03730 d405f37a959754875310890677557064 196 Pfam PF13580 SIS domain 9 144 4.1E-34 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_03730 d405f37a959754875310890677557064 196 Gene3D G3DSA:3.40.50.10490 1 195 1.2E-72 T 13-10-2018 VAA_03730 d405f37a959754875310890677557064 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.311 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VAA_03730 d405f37a959754875310890677557064 196 SUPERFAMILY SSF53697 1 191 1.72E-57 T 13-10-2018 VAA_01496 317dd545adf7e11884545e9931a20602 222 Pfam PF09997 Predicted membrane protein (DUF2238) 62 197 2.6E-50 T 13-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VAA_01496 317dd545adf7e11884545e9931a20602 222 PIRSF PIRSF020606 19 219 3.3E-77 T 13-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 Pfam PF02119 Flagellar P-ring protein 22 362 8.4E-135 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.463 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_03515 fd42645e40e0db98b9fe4aa95f7809dc 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 1.4E-84 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VAA_1482 9474fb57c7a2d027a24f5ec18641a8e5 515 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 18 496 2.9E-206 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VAA_1482 9474fb57c7a2d027a24f5ec18641a8e5 515 Gene3D G3DSA:3.40.605.10 36 473 6.9E-154 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_1482 9474fb57c7a2d027a24f5ec18641a8e5 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VAA_1482 9474fb57c7a2d027a24f5ec18641a8e5 515 Gene3D G3DSA:3.40.309.10 261 465 6.9E-154 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VAA_1482 9474fb57c7a2d027a24f5ec18641a8e5 515 SUPERFAMILY SSF53720 11 497 3.27E-148 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_1482 9474fb57c7a2d027a24f5ec18641a8e5 515 Pfam PF00171 Aldehyde dehydrogenase family 27 492 1.4E-140 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VAA_03530 3042fb2583f1e1078efa7921a19f9eeb 211 PIRSF PIRSF028688 1 211 1.2E-120 T 13-10-2018 IPR014549 Flagellar protein FlgO VAA_03135 35b69102c0f73297da78eb53f4d6cafe 132 SUPERFAMILY SSF52540 27 124 1.86E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03135 35b69102c0f73297da78eb53f4d6cafe 132 Gene3D G3DSA:3.40.50.300 18 125 1.3E-11 T 13-10-2018 VAA_01118 f787f299607b1186f650ff7d475a26d3 242 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 225 4.1E-58 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 VAA_01118 f787f299607b1186f650ff7d475a26d3 242 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 229 5.4E-48 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 VAA_01359 744877167dc7ec45f06c8e5e14532248 207 Gene3D G3DSA:3.40.30.10 1 206 6.5E-42 T 13-10-2018 VAA_01359 744877167dc7ec45f06c8e5e14532248 207 Pfam PF01323 DSBA-like thioredoxin domain 7 180 7.1E-8 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VAA_01359 744877167dc7ec45f06c8e5e14532248 207 SUPERFAMILY SSF52833 4 186 8.78E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_02358 ca6abecbed61410f715d8cc9fe4f9044 343 Pfam PF03466 LysR substrate binding domain 140 338 3.0E-40 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_02358 ca6abecbed61410f715d8cc9fe4f9044 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 55 114 2.9E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_02358 ca6abecbed61410f715d8cc9fe4f9044 343 SUPERFAMILY SSF46785 53 135 9.08E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02358 ca6abecbed61410f715d8cc9fe4f9044 343 Gene3D G3DSA:3.40.190.290 142 343 4.1E-73 T 13-10-2018 VAA_02358 ca6abecbed61410f715d8cc9fe4f9044 343 Gene3D G3DSA:1.10.10.10 53 141 5.3E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02358 ca6abecbed61410f715d8cc9fe4f9044 343 SUPERFAMILY SSF53850 140 340 5.89E-38 T 13-10-2018 VAA_00834 8bab989b49af91e64c022116bd0cec2d 257 PIRSF PIRSF009320 86 252 8.5E-9 T 13-10-2018 VAA_00834 8bab989b49af91e64c022116bd0cec2d 257 PIRSF PIRSF009320 2 85 1.4E-13 T 13-10-2018 VAA_00834 8bab989b49af91e64c022116bd0cec2d 257 Pfam PF13614 AAA domain 2 178 9.0E-63 T 13-10-2018 IPR025669 AAA domain VAA_00834 8bab989b49af91e64c022116bd0cec2d 257 Gene3D G3DSA:3.40.50.300 1 255 4.1E-77 T 13-10-2018 VAA_00834 8bab989b49af91e64c022116bd0cec2d 257 SUPERFAMILY SSF52540 2 253 9.69E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02519 831ec50ad48a0d1405148adaa1332aff 476 Gene3D G3DSA:3.40.50.300 244 475 1.6E-17 T 13-10-2018 VAA_02519 831ec50ad48a0d1405148adaa1332aff 476 SUPERFAMILY SSF52540 245 474 4.39E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02036 d9b0906c6e265e9fe8a3e18f45a1fd68 264 PIRSF PIRSF029195 1 258 6.7E-41 T 13-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VAA_02036 d9b0906c6e265e9fe8a3e18f45a1fd68 264 SUPERFAMILY SSF55804 128 251 3.66E-23 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02036 d9b0906c6e265e9fe8a3e18f45a1fd68 264 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 129 252 3.4E-20 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VAA_02036 d9b0906c6e265e9fe8a3e18f45a1fd68 264 SUPERFAMILY SSF55594 8 87 2.49E-6 T 13-10-2018 IPR035895 HPr-like superfamily VAA_02036 d9b0906c6e265e9fe8a3e18f45a1fd68 264 Gene3D G3DSA:3.40.930.10 126 252 1.4E-20 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VAA_02005 0642a7e51f12aef3e204604127651902 130 Pfam PF12614 Ribosome recycling factor 5 128 4.1E-55 T 13-10-2018 IPR022253 Ribosome recycling factor. bacterial VAA_01438 bd57c2fb563119f4db63ac55beac01cc 286 SUPERFAMILY SSF103481 47 135 3.66E-5 T 13-10-2018 VAA_01438 bd57c2fb563119f4db63ac55beac01cc 286 SUPERFAMILY SSF103481 185 282 3.07E-10 T 13-10-2018 VAA_01438 bd57c2fb563119f4db63ac55beac01cc 286 Pfam PF00892 EamA-like transporter family 148 278 1.3E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_03455 465fcc75cd41ef89258494fae45cb8db 267 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 7.1E-7 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAA_03455 465fcc75cd41ef89258494fae45cb8db 267 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 7.1E-7 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAA_03455 465fcc75cd41ef89258494fae45cb8db 267 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 7.1E-7 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAA_03455 465fcc75cd41ef89258494fae45cb8db 267 PRINTS PR01003 Flagellar assembly protein FliH signature 108 126 7.1E-7 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VAA_03455 465fcc75cd41ef89258494fae45cb8db 267 Pfam PF02108 Flagellar assembly protein FliH 125 251 1.1E-32 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VAA_00472 16198b557d475dc0d93588fc003c14bc 729 SUPERFAMILY SSF56349 339 544 6.18E-6 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_00472 16198b557d475dc0d93588fc003c14bc 729 Gene3D G3DSA:1.10.443.10 332 556 4.5E-6 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00039 91f3134dc4614aaea12a15951a094eae 69 Pfam PF03692 Putative zinc- or iron-chelating domain 22 56 8.0E-8 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VAA_03094 fcbf4a874003f0a0d91890fa828a2059 227 SUPERFAMILY SSF51735 4 214 5.51E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03094 fcbf4a874003f0a0d91890fa828a2059 227 Pfam PF08732 HIM1 75 166 3.9E-11 T 13-10-2018 IPR014843 Protein Him1/Fmp52 VAA_03094 fcbf4a874003f0a0d91890fa828a2059 227 Gene3D G3DSA:3.40.50.720 1 226 1.2E-50 T 13-10-2018 VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 Gene3D G3DSA:3.40.50.720 1 246 1.3E-70 T 13-10-2018 VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.6E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.6E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.6E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.6E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.6E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.6E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 SUPERFAMILY SSF51735 10 242 1.28E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 Pfam PF00106 short chain dehydrogenase 14 208 1.7E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_03325 8c4c53e7da627f9934e15f224a609f4f 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_03453 6b21144b0e74dd4b6ed91f00386cd28d 150 Pfam PF02050 Flagellar FliJ protein 17 140 1.2E-30 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VAA_03453 6b21144b0e74dd4b6ed91f00386cd28d 150 PIRSF PIRSF019404 1 146 7.8E-29 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 VAA_03453 6b21144b0e74dd4b6ed91f00386cd28d 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.7E-36 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 SUPERFAMILY SSF55811 52 144 1.3E-21 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 144 172 2.3E-9 T 13-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 Hamap MF_00297 NADH pyrophosphatase [nudC]. 46 305 41.612 T 13-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 Pfam PF00293 NUDIX domain 180 279 6.8E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 Gene3D G3DSA:3.90.79.10 174 304 2.5E-39 T 13-10-2018 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 ProSitePatterns PS00893 Nudix box signature. 207 228 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 SUPERFAMILY SSF55811 127 291 2.03E-40 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VAA_00348 b3768fb350b7b5458af392fd89c7e27f 308 Gene3D G3DSA:3.90.79.20 38 173 2.0E-30 T 13-10-2018 VAA_01531 be61128113e4abea9f7e5570b9d316df 151 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 29 122 2.0E-37 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA VAA_01531 be61128113e4abea9f7e5570b9d316df 151 Pfam PF11756 Nitrous oxide-stimulated promoter 30 132 2.6E-43 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA VAA_03613 7f320a774b17f3fb8a633e78e2625996 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.946 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VAA_03613 7f320a774b17f3fb8a633e78e2625996 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.2E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_03613 7f320a774b17f3fb8a633e78e2625996 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 206 1.0E-108 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VAA_03613 7f320a774b17f3fb8a633e78e2625996 210 PIRSF PIRSF006102 3 210 1.4E-72 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VAA_01154 ff72d8c563e8f1f52dbd74afac68d2d3 434 SMART SM00267 264 434 4.8E-39 T 13-10-2018 IPR000160 GGDEF domain VAA_01154 ff72d8c563e8f1f52dbd74afac68d2d3 434 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 429 1.9E-35 T 13-10-2018 IPR000160 GGDEF domain VAA_01154 ff72d8c563e8f1f52dbd74afac68d2d3 434 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 432 1.1E-36 T 13-10-2018 IPR000160 GGDEF domain VAA_01154 ff72d8c563e8f1f52dbd74afac68d2d3 434 SUPERFAMILY SSF55073 279 433 6.28E-38 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_01154 ff72d8c563e8f1f52dbd74afac68d2d3 434 Gene3D G3DSA:3.30.70.270 268 434 3.3E-42 T 13-10-2018 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 Hamap MF_00422 Protein translocase subunit SecE [secE]. 90 145 13.338 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 95 123 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 Gene3D G3DSA:1.20.5.1030 90 146 5.0E-17 T 13-10-2018 IPR038379 SecE superfamily VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 PRINTS PR01650 Bacterial translocase SecE signature 133 149 1.9E-40 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 PRINTS PR01650 Bacterial translocase SecE signature 113 133 1.9E-40 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 PRINTS PR01650 Bacterial translocase SecE signature 68 89 1.9E-40 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.9E-40 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 93 147 1.2E-17 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VAA_00357 7c76e75fb654ccf36d3fe1d11d6ccf6b 149 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 145 1.3E-20 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 Gene3D G3DSA:2.160.20.70 113 220 8.3E-30 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.843 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 1.6E-75 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 Gene3D G3DSA:3.30.750.120 1 112 6.9E-32 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 6.9E-31 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 SUPERFAMILY SSF63848 113 218 3.01E-30 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VAA_02326 fa07658a2f076eea2acff6ae37cf233f 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 5.0E-31 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.738 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 146 2.0E-57 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 Gene3D G3DSA:3.10.420.10 3 155 3.3E-57 T 13-10-2018 IPR035958 SecB-like superfamily VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 SUPERFAMILY SSF54611 3 143 5.23E-51 T 13-10-2018 IPR035958 SecB-like superfamily VAA_02612 515713e6cf57dc9753a82edf7d59dd96 155 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.7E-54 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VAA_02591 b23336427ecf9fe46fd4adf53bfb77cf 305 Pfam PF01040 UbiA prenyltransferase family 21 274 9.8E-38 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VAA_02591 b23336427ecf9fe46fd4adf53bfb77cf 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.793 T 13-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VAA_02591 b23336427ecf9fe46fd4adf53bfb77cf 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 3.2E-100 T 13-10-2018 VAA_02591 b23336427ecf9fe46fd4adf53bfb77cf 305 PIRSF PIRSF005355 1 303 4.1E-84 T 13-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VAA_02909 fdf912de71d77aaf120fdd746736a02c 128 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 7.3E-41 T 13-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VAA_02909 fdf912de71d77aaf120fdd746736a02c 128 PIRSF PIRSF028770 1 128 5.5E-66 T 13-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VAA_01946 afd98640e80e567ca19dac0ee050dddd 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 9.4E-21 T 13-10-2018 IPR021379 Protein of unknown function DUF3012 VAA_01946 afd98640e80e567ca19dac0ee050dddd 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 7.8E-20 T 13-10-2018 IPR021379 Protein of unknown function DUF3012 VAA_00628 bd8efcd267dd52dedd055ca244a56b29 96 SUPERFAMILY SSF54909 2 81 1.98E-23 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VAA_00628 bd8efcd267dd52dedd055ca244a56b29 96 Gene3D G3DSA:3.30.70.100 1 93 3.7E-25 T 13-10-2018 VAA_00628 bd8efcd267dd52dedd055ca244a56b29 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.5E-17 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 PRINTS PR00811 Bacterial general secretion pathway protein D signature 338 362 2.0E-17 T 13-10-2018 IPR001775 GspD/PilQ family VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 501 2.0E-17 T 13-10-2018 IPR001775 GspD/PilQ family VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 PRINTS PR00811 Bacterial general secretion pathway protein D signature 269 279 2.0E-17 T 13-10-2018 IPR001775 GspD/PilQ family VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 PRINTS PR00811 Bacterial general secretion pathway protein D signature 506 520 2.0E-17 T 13-10-2018 IPR001775 GspD/PilQ family VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 SMART SM00965 93 141 6.4E-4 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 Pfam PF07655 Secretin N-terminal domain 145 240 5.0E-26 T 13-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 Pfam PF00263 Bacterial type II and III secretion system protein 343 518 9.6E-42 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 Gene3D G3DSA:3.55.50.30 53 145 2.2E-9 T 13-10-2018 VAA_01733 05c0d74757943b4c1996284fe4e1c6d8 542 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 235 518 5.9E-91 T 13-10-2018 IPR013358 Pilus biogenesis, MshL VAA_01723 d08e5b388a6c891ef786a70a9e857c94 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01723 d08e5b388a6c891ef786a70a9e857c94 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 22 2.1E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_01723 d08e5b388a6c891ef786a70a9e857c94 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 22 7.9E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VAA_00477 c7715afa07dc22911de13aeea18c271a 834 SUPERFAMILY SSF69369 548 703 7.59E-9 T 13-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 VAA_00477 c7715afa07dc22911de13aeea18c271a 834 Pfam PF06958 S-type Pyocin 568 698 2.0E-26 T 13-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 VAA_00974 e69500b7231bd2387f231d18f488091b 303 Pfam PF05661 Protein of unknown function (DUF808) 4 292 2.8E-113 T 13-10-2018 IPR008526 Inner membrane protein YedI VAA_00974 e69500b7231bd2387f231d18f488091b 303 PIRSF PIRSF016660 1 303 6.1E-118 T 13-10-2018 IPR008526 Inner membrane protein YedI VAA_00249 46b600e1fd21da1c285f4e28e43588d2 240 Pfam PF01925 Sulfite exporter TauE/SafE 12 232 3.5E-24 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAA_03447 049b6e62d97c1cb3ce0082e8c52d2b53 126 ProSitePatterns PS00266 Somatotropin, prolactin and related hormones signature 1. 10 43 - T 13-10-2018 IPR018116 Somatotropin hormone, conserved site GO:0005179|GO:0005576 VAA_03447 049b6e62d97c1cb3ce0082e8c52d2b53 126 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 2.0E-18 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VAA_03447 049b6e62d97c1cb3ce0082e8c52d2b53 126 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 9.6E-23 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 Gene3D G3DSA:2.130.10.10 21 246 1.1E-29 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 177 191 - T 13-10-2018 IPR019775 WD40 repeat, conserved site VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 SUPERFAMILY SSF50998 25 325 2.35E-44 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 SMART SM00320 193 231 0.44 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 SMART SM00320 66 107 110.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 SMART SM00320 286 324 6.5 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 SMART SM00320 152 190 1.0E-4 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 SMART SM00320 237 275 1.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 Pfam PF00400 WD domain, G-beta repeat 158 190 0.0026 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VAA_00124 7a5ebedc96b0e0708d625d8a57a0b7a6 327 Gene3D G3DSA:2.130.10.10 247 327 2.4E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VAA_02994 d12bc3e658c7ba3ca55f599face49bfa 288 Pfam PF03280 Proteobacterial lipase chaperone protein 89 273 4.4E-46 T 13-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VAA_02994 d12bc3e658c7ba3ca55f599face49bfa 288 SUPERFAMILY SSF158855 34 285 5.89E-60 T 13-10-2018 VAA_01348 cadd1dee7fe374c272a627edf4ef01b8 425 SUPERFAMILY SSF103473 28 413 3.01E-51 T 13-10-2018 IPR036259 MFS transporter superfamily VAA_01348 cadd1dee7fe374c272a627edf4ef01b8 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 102 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VAA_01348 cadd1dee7fe374c272a627edf4ef01b8 425 Gene3D G3DSA:1.20.1250.20 27 413 9.9E-44 T 13-10-2018 VAA_01348 cadd1dee7fe374c272a627edf4ef01b8 425 Pfam PF07690 Major Facilitator Superfamily 35 367 2.6E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VAA_02068 a51c7d9e149eaf7d5735094c0358a0c4 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.3E-33 T 13-10-2018 IPR021284 Protein of unknown function DUF2750 VAA_02366 bead04197e5efdd3cf51519365a15582 424 Gene3D G3DSA:2.40.160.60 26 424 1.3E-118 T 13-10-2018 VAA_02366 bead04197e5efdd3cf51519365a15582 424 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 424 8.9E-124 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA_02366 bead04197e5efdd3cf51519365a15582 424 SUPERFAMILY SSF56935 26 424 1.16E-95 T 13-10-2018 VAA_03955 03f52f2bc2c88e896ed47c700d6a5d72 108 Pfam PF13007 Transposase C of IS166 homeodomain 42 107 3.2E-12 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain VAA_03955 03f52f2bc2c88e896ed47c700d6a5d72 108 Gene3D G3DSA:1.20.1280.100 17 87 9.9E-6 T 13-10-2018 VAA_03572 11ce8b228436f470cac61a323c76964f 280 Pfam PF01148 Cytidylyltransferase family 2 280 4.3E-69 T 13-10-2018 VAA_03572 11ce8b228436f470cac61a323c76964f 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VAA_00913 885fbd70084f09dd81cb0cd4083a0b62 208 Gene3D G3DSA:3.80.10.10 29 204 4.0E-7 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily VAA_00784 8e841e6e346365650a9f54f8bf6a20b6 361 Pfam PF01594 AI-2E family transporter 14 347 1.4E-51 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like VAA_01389 b6e1023e1136482cec6ef40191bbaafc 268 SUPERFAMILY SSF74653 188 264 2.75E-22 T 13-10-2018 VAA_01389 b6e1023e1136482cec6ef40191bbaafc 268 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 190 266 4.8E-22 T 13-10-2018 IPR006260 TonB/TolA, C-terminal VAA_01389 b6e1023e1136482cec6ef40191bbaafc 268 Gene3D G3DSA:3.30.1150.10 167 267 3.7E-21 T 13-10-2018 VAA_01389 b6e1023e1136482cec6ef40191bbaafc 268 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 189 266 2.9E-22 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 VAA_03740 bdea647f3f6d6448dbfce5903ae6b7d8 147 PIRSF PIRSF006318 1 136 7.2E-49 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 VAA_03740 bdea647f3f6d6448dbfce5903ae6b7d8 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 2.1E-44 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 VAA_01274 518e24409e2f736d35f32a10b426abb5 285 SUPERFAMILY SSF53850 27 272 3.14E-57 T 13-10-2018 VAA_01274 518e24409e2f736d35f32a10b426abb5 285 Gene3D G3DSA:3.40.190.10 138 229 2.9E-61 T 13-10-2018 VAA_01274 518e24409e2f736d35f32a10b426abb5 285 Gene3D G3DSA:3.40.190.10 44 262 2.9E-61 T 13-10-2018 VAA_01274 518e24409e2f736d35f32a10b426abb5 285 SMART SM00062 52 275 2.0E-46 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01274 518e24409e2f736d35f32a10b426abb5 285 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 273 4.1E-50 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_01274 518e24409e2f736d35f32a10b426abb5 285 SMART SM00079 52 274 0.0052 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VAA_00911 4ee033243977562a67cb2ca9f14b434c 121 Pfam PF04175 Protein of unknown function (DUF406) 24 112 2.8E-23 T 13-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VAA_00911 4ee033243977562a67cb2ca9f14b434c 121 Gene3D G3DSA:3.30.70.860 15 120 7.7E-31 T 13-10-2018 IPR035571 UPF0234-like, C-terminal VAA_01293 4440b243d01f7688694153d28448db00 553 SUPERFAMILY SSF52091 439 541 9.22E-18 T 13-10-2018 IPR036513 STAS domain superfamily VAA_01293 4440b243d01f7688694153d28448db00 553 Pfam PF00916 Sulfate permease family 20 384 1.6E-87 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VAA_01293 4440b243d01f7688694153d28448db00 553 Pfam PF01740 STAS domain 440 539 3.3E-18 T 13-10-2018 IPR002645 STAS domain VAA_01293 4440b243d01f7688694153d28448db00 553 Gene3D G3DSA:3.30.750.24 423 549 1.3E-31 T 13-10-2018 IPR036513 STAS domain superfamily VAA_02136 256c9ee28f7fe2c100bc674dbe9ef981 295 Gene3D G3DSA:1.10.3720.10 84 291 1.1E-19 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02136 256c9ee28f7fe2c100bc674dbe9ef981 295 SUPERFAMILY SSF161098 89 276 7.33E-24 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02136 256c9ee28f7fe2c100bc674dbe9ef981 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 3.2E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_02136 256c9ee28f7fe2c100bc674dbe9ef981 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 5.1E-13 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VAA_00489 3b021e9daec6e081f14b57e6a758de61 243 Gene3D G3DSA:3.90.1490.10 159 235 2.0E-5 T 13-10-2018 VAA_00489 3b021e9daec6e081f14b57e6a758de61 243 SUPERFAMILY SSF52402 14 229 1.35E-48 T 13-10-2018 VAA_00489 3b021e9daec6e081f14b57e6a758de61 243 Pfam PF01902 Diphthamide synthase 19 209 1.1E-19 T 13-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VAA_00489 3b021e9daec6e081f14b57e6a758de61 243 Gene3D G3DSA:3.40.50.620 13 157 1.2E-16 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02583 1d08040951afc3e496fb5d25c987b2a3 108 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 3.0E-49 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VAA_02583 1d08040951afc3e496fb5d25c987b2a3 108 SUPERFAMILY SSF47598 3 103 9.12E-57 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VAA_02583 1d08040951afc3e496fb5d25c987b2a3 108 Gene3D G3DSA:1.10.140.10 2 105 4.3E-56 T 13-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VAA_02583 1d08040951afc3e496fb5d25c987b2a3 108 Hamap MF_00744 Met repressor [metJ]. 1 105 34.879 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VAA_02583 1d08040951afc3e496fb5d25c987b2a3 108 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.8E-59 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VAA_03538 3a6163ed77ad8ae731248d794d9b8126 149 SUPERFAMILY SSF52833 26 100 8.95E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_03538 3a6163ed77ad8ae731248d794d9b8126 149 Pfam PF04214 Protein of unknown function, DUF 51 120 1.3E-32 T 13-10-2018 IPR007332 Protein of unknown function DUF411 VAA_03266 3a735408a646e1f6d75d62646dac1694 146 SUPERFAMILY SSF54637 8 133 3.28E-30 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03266 3a735408a646e1f6d75d62646dac1694 146 Pfam PF13279 Thioesterase-like superfamily 18 122 3.1E-13 T 13-10-2018 VAA_03266 3a735408a646e1f6d75d62646dac1694 146 Gene3D G3DSA:3.10.129.10 6 142 1.9E-25 T 13-10-2018 VAA_00258 21f12c7b0ad1177309d00340e7945b0b 101 SUPERFAMILY SSF50249 2 100 1.23E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VAA_00258 21f12c7b0ad1177309d00340e7945b0b 101 Pfam PF00436 Single-strand binding protein family 4 90 2.9E-9 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VAA_00258 21f12c7b0ad1177309d00340e7945b0b 101 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 101 1.9E-32 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VAA_00258 21f12c7b0ad1177309d00340e7945b0b 101 Hamap MF_00720 Primosomal replication protein N [priB]. 3 101 22.739 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VAA_00258 21f12c7b0ad1177309d00340e7945b0b 101 PIRSF PIRSF003135 1 101 2.4E-45 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VAA_00258 21f12c7b0ad1177309d00340e7945b0b 101 Gene3D G3DSA:2.40.50.140 1 101 9.2E-31 T 13-10-2018 VAA_02448 d36c0c3f4e719bdff50f4574f4302da6 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 3.3E-42 T 13-10-2018 IPR013527 YicC-like, N-terminal VAA_02448 d36c0c3f4e719bdff50f4574f4302da6 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 6.6E-35 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 VAA_02448 d36c0c3f4e719bdff50f4574f4302da6 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 6.1E-117 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VAA_00432 5e810269c249084ac58376963abe3927 348 SUPERFAMILY SSF53850 24 340 4.35E-56 T 13-10-2018 VAA_00432 5e810269c249084ac58376963abe3927 348 Pfam PF13416 Bacterial extracellular solute-binding protein 38 303 2.0E-22 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_00432 5e810269c249084ac58376963abe3927 348 Gene3D G3DSA:3.40.190.10 122 316 3.9E-62 T 13-10-2018 VAA_00432 5e810269c249084ac58376963abe3927 348 Gene3D G3DSA:3.40.190.10 27 310 3.9E-62 T 13-10-2018 VAA_00432 5e810269c249084ac58376963abe3927 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 9.7E-13 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_00432 5e810269c249084ac58376963abe3927 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 9.7E-13 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_00432 5e810269c249084ac58376963abe3927 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 113 129 9.7E-13 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_00432 5e810269c249084ac58376963abe3927 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 9.7E-13 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VAA_01353 ebb67529ba822204dcae6ffc3feb4d21 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 236 7.3E-56 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VAA_01353 ebb67529ba822204dcae6ffc3feb4d21 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 227 3.6E-62 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VAA_01353 ebb67529ba822204dcae6ffc3feb4d21 238 SUPERFAMILY SSF100950 3 237 6.7E-61 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VAA_01353 ebb67529ba822204dcae6ffc3feb4d21 238 Gene3D G3DSA:3.40.50.1360 1 238 4.6E-89 T 13-10-2018 VAA_00909 33ea38a0d19fafebd6b1a6cd73f2b400 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VAA_00909 33ea38a0d19fafebd6b1a6cd73f2b400 153 Gene3D G3DSA:1.10.357.10 1 153 5.5E-62 T 13-10-2018 VAA_00909 33ea38a0d19fafebd6b1a6cd73f2b400 153 SUPERFAMILY SSF46689 1 74 7.7E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03476 544b7c0d02c27dc76e30cd6a401dd2eb 97 Pfam PF09904 Winged helix-turn helix 6 92 2.0E-37 T 13-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VAA_03476 544b7c0d02c27dc76e30cd6a401dd2eb 97 PIRSF PIRSF037266 1 96 5.7E-41 T 13-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VAA_03476 544b7c0d02c27dc76e30cd6a401dd2eb 97 Gene3D G3DSA:1.10.10.10 2 97 2.5E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 Gene3D G3DSA:3.40.190.10 97 291 5.4E-41 T 13-10-2018 VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 SUPERFAMILY SSF46785 12 92 1.92E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 SUPERFAMILY SSF53850 95 297 8.82E-32 T 13-10-2018 VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 Pfam PF03466 LysR substrate binding domain 92 294 1.8E-29 T 13-10-2018 IPR005119 LysR, substrate-binding VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 Gene3D G3DSA:1.10.10.10 8 96 2.0E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 5.3E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_01288 0ab4e7af06be4d9ad1ffb3a23a4506d0 299 Gene3D G3DSA:3.40.190.10 169 266 5.4E-41 T 13-10-2018 VAA_03580 7ee3072b19016f7b6b141a4870909054 129 Pfam PF11944 Protein of unknown function (DUF3461) 3 128 7.6E-55 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 VAA_03580 7ee3072b19016f7b6b141a4870909054 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 3 129 30.663 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 VAA_03580 7ee3072b19016f7b6b141a4870909054 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 3 128 2.0E-62 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 VAA_00384 4159e0d295a3e2299f36dbd5d55947db 148 Pfam PF00583 Acetyltransferase (GNAT) family 25 121 6.5E-15 T 13-10-2018 IPR000182 GNAT domain VAA_00384 4159e0d295a3e2299f36dbd5d55947db 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 143 4.4E-38 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VAA_00384 4159e0d295a3e2299f36dbd5d55947db 148 SUPERFAMILY SSF55729 1 145 7.09E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00384 4159e0d295a3e2299f36dbd5d55947db 148 Gene3D G3DSA:3.40.630.30 6 147 5.6E-38 T 13-10-2018 VAA_03667 c79327b520ce04585da5f7566c7dee88 234 Pfam PF10144 Bacterial virulence factor haemolysin 35 180 1.0E-39 T 13-10-2018 IPR019305 Uncharacterised protein family Smp VAA_02509 f46d27ac700f70a02b73726f13e38d1a 289 Pfam PF06251 Capsule biosynthesis GfcC 60 289 6.2E-77 T 13-10-2018 IPR010425 Domain of unknown function DUF1017 VAA_02509 f46d27ac700f70a02b73726f13e38d1a 289 Gene3D G3DSA:3.10.560.10 186 258 3.3E-21 T 13-10-2018 VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 Gene3D G3DSA:3.40.50.740 22 46 5.4E-31 T 13-10-2018 VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 Pfam PF01568 Molydopterin dinucleotide binding domain 155 268 6.3E-25 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 Gene3D G3DSA:3.40.228.10 98 123 5.4E-31 T 13-10-2018 VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 Gene3D G3DSA:2.40.40.20 131 289 5.7E-47 T 13-10-2018 VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 SUPERFAMILY SSF53706 5 147 5.0E-27 T 13-10-2018 VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 SUPERFAMILY SSF50692 151 293 6.33E-41 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VAA_01447 527f38bdb778d7d2faf97159c39852b7 295 Gene3D G3DSA:3.90.55.10 2 97 5.4E-31 T 13-10-2018 VAA_03277 13d95a9ce631ac46b0ae850725715155 202 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 201 4.0E-82 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAA_03277 13d95a9ce631ac46b0ae850725715155 202 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAA_03277 13d95a9ce631ac46b0ae850725715155 202 Pfam PF01081 KDPG and KHG aldolase 5 197 1.9E-73 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAA_03277 13d95a9ce631ac46b0ae850725715155 202 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VAA_03277 13d95a9ce631ac46b0ae850725715155 202 SUPERFAMILY SSF51569 3 201 4.21E-65 T 13-10-2018 VAA_03277 13d95a9ce631ac46b0ae850725715155 202 Gene3D G3DSA:3.20.20.70 1 202 3.9E-74 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_00203 45c18f61de979d9917411f825486976c 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 2.9E-23 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VAA_00203 45c18f61de979d9917411f825486976c 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 4.6E-29 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VAA_00203 45c18f61de979d9917411f825486976c 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.81 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VAA_02598 33f4ccecc9b217abcf57251b02510699 112 Pfam PF11333 Protein of unknown function (DUF3135) 9 88 4.3E-34 T 13-10-2018 IPR021482 Protein of unknown function DUF3135 VAA_00386 c5e654459b651a7ff60f22074c1a6836 167 SUPERFAMILY SSF55729 1 153 2.23E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00386 c5e654459b651a7ff60f22074c1a6836 167 Gene3D G3DSA:3.40.630.30 1 167 1.3E-45 T 13-10-2018 VAA_00386 c5e654459b651a7ff60f22074c1a6836 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 124 2.1E-8 T 13-10-2018 VAA_02163 ae0bda132ee7db5ac306b9a5be7d7276 325 SUPERFAMILY SSF56059 48 282 1.02E-19 T 13-10-2018 VAA_02163 ae0bda132ee7db5ac306b9a5be7d7276 325 Pfam PF14397 Sugar-transfer associated ATP-grasp 24 296 4.3E-116 T 13-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VAA_02163 ae0bda132ee7db5ac306b9a5be7d7276 325 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 7 320 6.5E-168 T 13-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VAA_01063 188e3f45f4ba715246e392933d9d77ff 225 SUPERFAMILY SSF54637 83 218 2.43E-26 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_01063 188e3f45f4ba715246e392933d9d77ff 225 Pfam PF01575 MaoC like domain 81 196 5.8E-20 T 13-10-2018 IPR002539 MaoC-like dehydratase domain VAA_01063 188e3f45f4ba715246e392933d9d77ff 225 Gene3D G3DSA:3.10.129.10 74 223 7.7E-33 T 13-10-2018 VAA_02126 0e5bedb0d3795f313177516928b68fee 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 3.0E-8 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_02126 0e5bedb0d3795f313177516928b68fee 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 3.0E-8 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_02126 0e5bedb0d3795f313177516928b68fee 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 427 447 3.0E-8 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_02126 0e5bedb0d3795f313177516928b68fee 447 Pfam PF00209 Sodium:neurotransmitter symporter family 146 447 2.5E-28 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_02126 0e5bedb0d3795f313177516928b68fee 447 Pfam PF00209 Sodium:neurotransmitter symporter family 6 117 8.4E-19 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_02126 0e5bedb0d3795f313177516928b68fee 447 SUPERFAMILY SSF161070 6 447 8.37E-118 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VAA_03750 e2eb4f3e10338efe4f6def3cdf7025aa 335 Gene3D G3DSA:1.20.1600.10 23 334 5.6E-84 T 13-10-2018 VAA_03750 e2eb4f3e10338efe4f6def3cdf7025aa 335 SUPERFAMILY SSF56954 1 331 1.06E-66 T 13-10-2018 VAA_03750 e2eb4f3e10338efe4f6def3cdf7025aa 335 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 330 7.0E-77 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VAA_03750 e2eb4f3e10338efe4f6def3cdf7025aa 335 Pfam PF02321 Outer membrane efflux protein 26 207 1.6E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_03750 e2eb4f3e10338efe4f6def3cdf7025aa 335 Pfam PF02321 Outer membrane efflux protein 231 331 6.3E-16 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_02793 002742e07958b4fe7211f52fdf3d77a6 482 Pfam PF03600 Citrate transporter 52 427 3.3E-52 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VAA_02021 59ecf43170d7a1a08be6c5d6f9452a83 435 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 431 2.0E-156 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAA_02021 59ecf43170d7a1a08be6c5d6f9452a83 435 PIRSF PIRSF015658 1 433 2.2E-171 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAA_02021 59ecf43170d7a1a08be6c5d6f9452a83 435 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 20 427 9.5E-177 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VAA_00816 c21d40f0f5a9982245e112fc2e35e36a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 1.7E-117 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAA_00816 c21d40f0f5a9982245e112fc2e35e36a 485 Pfam PF02386 Cation transport protein 39 477 8.0E-89 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VAA_00816 c21d40f0f5a9982245e112fc2e35e36a 485 PIRSF PIRSF006247 1 485 3.5E-176 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VAA_00719 365ac5ca8b31e93245d294310af2675e 280 Pfam PF01578 Cytochrome C assembly protein 56 278 6.8E-44 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VAA_03038 db0899c38dd2d5b0e9ad7ccd4e149589 169 PIRSF PIRSF028301 1 169 1.6E-57 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAA_03038 db0899c38dd2d5b0e9ad7ccd4e149589 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 4.4E-55 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAA_03038 db0899c38dd2d5b0e9ad7ccd4e149589 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 161 2.8E-57 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAA_01802 63797452689ea65e9ecc3c12afe3500b 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 132 1.6E-29 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VAA_01802 63797452689ea65e9ecc3c12afe3500b 134 Gene3D G3DSA:3.30.420.270 61 129 5.8E-12 T 13-10-2018 VAA_01065 4774e62910426a4fd615693f10366017 152 Pfam PF11225 Protein of unknown function (DUF3024) 94 152 1.7E-17 T 13-10-2018 IPR021388 Bacteriophage 933W, L0084 VAA_01226 6129f53017c8d5fb039b36465fec2a51 867 SMART SM00257 375 427 2.1E-4 T 13-10-2018 IPR018392 LysM domain VAA_01226 6129f53017c8d5fb039b36465fec2a51 867 Gene3D G3DSA:3.10.350.10 318 359 2.3E-5 T 13-10-2018 IPR036779 LysM domain superfamily VAA_01226 6129f53017c8d5fb039b36465fec2a51 867 Gene3D G3DSA:3.10.350.10 360 426 2.3E-5 T 13-10-2018 IPR036779 LysM domain superfamily VAA_01883 cc22533d79cde5d7a14879a3985e1012 370 Pfam PF00793 DAHP synthetase I family 61 355 1.6E-98 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VAA_01883 cc22533d79cde5d7a14879a3985e1012 370 SUPERFAMILY SSF51569 25 364 4.84E-130 T 13-10-2018 VAA_01883 cc22533d79cde5d7a14879a3985e1012 370 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 23 367 9.5E-158 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAA_01883 cc22533d79cde5d7a14879a3985e1012 370 PIRSF PIRSF001361 11 370 3.3E-154 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VAA_01883 cc22533d79cde5d7a14879a3985e1012 370 Gene3D G3DSA:3.20.20.70 18 368 2.7E-151 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_01179 94b54dde1bd0a16f5f071d597be3327f 64 Pfam PF14056 Domain of unknown function (DUF4250) 9 63 6.1E-21 T 13-10-2018 IPR025346 Protein of unknown function DUF4250 VAA_00643 3a526b1f078a9996c45141234d08e73c 252 Pfam PF01203 Type II secretion system (T2SS), protein N 38 247 8.4E-60 T 13-10-2018 IPR022792 Type II secretion system, protein N VAA_03549 cb01fb5a2b4f1bf81cefacbd380f42d9 423 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 31 407 7.6E-137 T 13-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VAA_01854 1e526ffb3aad25df33c164bcde43374f 105 Pfam PF12321 Protein of unknown function (DUF3634) 2 103 6.9E-43 T 13-10-2018 IPR022090 Protein of unknown function DUF3634 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 151 171 7.9E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 210 225 7.9E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 228 250 7.9E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 122 141 7.9E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 94 118 7.9E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 68 86 7.9E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 SUPERFAMILY SSF53474 42 278 5.56E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 Gene3D G3DSA:3.40.50.1820 18 297 8.4E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02920 d534b815539ac4a86dca37ffe8f68a00 303 Pfam PF00326 Prolyl oligopeptidase family 83 293 2.0E-50 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VAA_01062 13eadcc14d4532bad9e3d769695f9a00 180 Pfam PF00583 Acetyltransferase (GNAT) family 47 137 2.1E-15 T 13-10-2018 IPR000182 GNAT domain VAA_01062 13eadcc14d4532bad9e3d769695f9a00 180 Gene3D G3DSA:3.40.630.30 2 169 3.8E-28 T 13-10-2018 VAA_01062 13eadcc14d4532bad9e3d769695f9a00 180 SUPERFAMILY SSF55729 1 162 5.15E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_03480 da38052615d96d17bcc8fe2dd9ef927a 69 Pfam PF11446 Protein of unknown function (DUF2897) 15 61 2.5E-16 T 13-10-2018 IPR021550 Protein of unknown function DUF2897 VAA_01094 b36ac171e1fd162b7022f8eb36e9d0f6 208 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 23.377 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VAA_01094 b36ac171e1fd162b7022f8eb36e9d0f6 208 Gene3D G3DSA:3.30.160.150 24 175 3.0E-50 T 13-10-2018 VAA_01094 b36ac171e1fd162b7022f8eb36e9d0f6 208 Pfam PF04390 Lipopolysaccharide-assembly 39 161 1.2E-10 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VAA_00926 347b4354384ae4c40b7f4c46f3ca5833 550 Pfam PF13584 Oxygen tolerance 23 471 1.7E-70 T 13-10-2018 IPR025738 Aerotolerance-related protein BatD VAA_03383 90aa9455920a133fe6ce669e490fa578 329 SMART SM00260 181 315 0.0035 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_03383 90aa9455920a133fe6ce669e490fa578 329 SUPERFAMILY SSF50341 183 317 2.22E-13 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VAA_03383 90aa9455920a133fe6ce669e490fa578 329 PIRSF PIRSF020479 6 329 3.5E-118 T 13-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VAA_03383 90aa9455920a133fe6ce669e490fa578 329 Pfam PF01584 CheW-like domain 185 317 7.9E-14 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VAA_01793 ef058e41de73d55b258234d7890be6ca 337 SUPERFAMILY SSF56529 77 334 1.7E-55 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAA_01793 ef058e41de73d55b258234d7890be6ca 337 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 8.0E-40 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VAA_01793 ef058e41de73d55b258234d7890be6ca 337 Gene3D G3DSA:3.90.850.10 1 336 4.7E-138 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAA_02798 332db61b95fc749a3db27fb53f66f1f5 344 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 8.2E-50 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 VAA_02798 332db61b95fc749a3db27fb53f66f1f5 344 PIRSF PIRSF029594 8 344 2.3E-142 T 13-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VAA_02497 8b42971131fdc9fcd383420ce8a2c82f 448 Pfam PF04577 Protein of unknown function (DUF563) 191 414 6.1E-44 T 13-10-2018 IPR007657 Glycosyltransferase 61 GO:0016757 VAA_01401 4d5ddd7a6bf6ce09fa70ada20a8c85cb 218 SMART SM00849 14 195 4.3E-37 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01401 4d5ddd7a6bf6ce09fa70ada20a8c85cb 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 4.4E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase VAA_01401 4d5ddd7a6bf6ce09fa70ada20a8c85cb 218 SUPERFAMILY SSF56281 5 211 3.93E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_01401 4d5ddd7a6bf6ce09fa70ada20a8c85cb 218 Gene3D G3DSA:3.60.15.10 3 213 1.5E-75 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_02830 9c0ff883d49873480af0d994da772ae7 362 SUPERFAMILY SSF81901 67 305 3.14E-11 T 13-10-2018 VAA_02830 9c0ff883d49873480af0d994da772ae7 362 Gene3D G3DSA:1.25.40.10 43 352 3.4E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03518 072c7e0df472884d599d4116ec308045 253 Pfam PF00460 Flagella basal body rod protein 12 39 2.1E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VAA_03518 072c7e0df472884d599d4116ec308045 253 SUPERFAMILY SSF117143 81 211 9.42E-18 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VAA_03518 072c7e0df472884d599d4116ec308045 253 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 8 125 1.9E-32 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VAA_03518 072c7e0df472884d599d4116ec308045 253 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 176 246 8.3E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VAA_02872 7f11962e9e6954c38b92e5ebdfe9c9d2 251 Gene3D G3DSA:1.20.144.10 9 241 3.0E-45 T 13-10-2018 VAA_02872 7f11962e9e6954c38b92e5ebdfe9c9d2 251 Pfam PF01569 PAP2 superfamily 88 231 2.9E-19 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAA_02872 7f11962e9e6954c38b92e5ebdfe9c9d2 251 SMART SM00014 85 231 2.4E-14 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VAA_02872 7f11962e9e6954c38b92e5ebdfe9c9d2 251 SUPERFAMILY SSF48317 26 236 1.28E-23 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VAA_01237 c1e1d37db6a3157a2edc195069396c02 195 SUPERFAMILY SSF53335 4 181 1.28E-25 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_01237 c1e1d37db6a3157a2edc195069396c02 195 Gene3D G3DSA:3.40.50.150 1 194 2.2E-46 T 13-10-2018 VAA_01237 c1e1d37db6a3157a2edc195069396c02 195 Pfam PF13649 Methyltransferase domain 39 125 3.5E-11 T 13-10-2018 VAA_00673 5e2ff48f33e383e4a1c806d7fec33356 376 Pfam PF14350 Beta protein 8 350 5.9E-71 T 13-10-2018 IPR025683 Protein beta VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 Gene3D G3DSA:3.40.30.10 3 117 3.3E-35 T 13-10-2018 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 SUPERFAMILY SSF52833 9 116 2.87E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 PIRSF PIRSF000077 11 117 1.4E-42 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 ProSitePatterns PS00194 Thioredoxin family active site. 34 52 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 TIGRFAM TIGR01068 thioredoxin: thioredoxin 18 116 2.4E-37 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 Pfam PF00085 Thioredoxin 14 115 8.3E-33 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 PRINTS PR00421 Thioredoxin family signature 41 50 3.8E-10 T 13-10-2018 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 PRINTS PR00421 Thioredoxin family signature 33 41 3.8E-10 T 13-10-2018 VAA_00614 04d31ac8b342c4192380bc9044129cb7 117 PRINTS PR00421 Thioredoxin family signature 81 92 3.8E-10 T 13-10-2018 VAA_03674 e147d81866a3323bbe4dbb8720b62cb9 45 Pfam PF17320 Family of unknown function (DUF5363) 4 41 3.1E-6 T 13-10-2018 IPR035292 Protein of unknown function DUF5363 VAA_02924 175ab1ce5b63aaf5901adfc5a9692dbe 486 Pfam PF07603 Protein of unknown function (DUF1566) 302 430 2.0E-10 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 VAA_02523 39a8e34d1387b131a76a2cd87b37d49a 361 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 2.8E-158 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 VAA_02523 39a8e34d1387b131a76a2cd87b37d49a 361 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 27.297 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 VAA_02523 39a8e34d1387b131a76a2cd87b37d49a 361 Pfam PF00953 Glycosyl transferase family 4 71 227 3.5E-29 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VAA_02750 8563296a567230c30767589a6461c7e1 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 7.4E-56 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VAA_02750 8563296a567230c30767589a6461c7e1 163 Pfam PF02470 MlaD protein 40 118 7.3E-19 T 13-10-2018 IPR003399 Mce/MlaD VAA_01731 2060c378147a4296c4f2bc420fd97a60 377 Gene3D G3DSA:1.25.40.10 159 371 7.2E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01731 2060c378147a4296c4f2bc420fd97a60 377 SMART SM00028 186 219 60.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01731 2060c378147a4296c4f2bc420fd97a60 377 SMART SM00028 286 319 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01731 2060c378147a4296c4f2bc420fd97a60 377 SMART SM00028 320 353 43.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01731 2060c378147a4296c4f2bc420fd97a60 377 SMART SM00028 220 253 330.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_01731 2060c378147a4296c4f2bc420fd97a60 377 SUPERFAMILY SSF81901 193 348 1.26E-12 T 13-10-2018 VAA_00631 6ca11606688aea73c55d6302f91ec36a 116 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 22 112 1.0E-32 T 13-10-2018 IPR009707 Membrane protein GlpM/YdgC VAA_00631 6ca11606688aea73c55d6302f91ec36a 116 Pfam PF06942 GlpM protein 6 111 1.4E-49 T 13-10-2018 IPR009707 Membrane protein GlpM/YdgC VAA_01786 a124dab0b9cf12468670dfe820ea64e5 210 PIRSF PIRSF006324 1 210 1.4E-54 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_01786 a124dab0b9cf12468670dfe820ea64e5 210 Pfam PF01810 LysE type translocator 15 208 4.2E-33 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_01833 9a792b8bfe0bd6a635fd1a908ef9381c 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 249 2.8E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01833 9a792b8bfe0bd6a635fd1a908ef9381c 256 SUPERFAMILY SSF161098 5 254 4.39E-55 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01833 9a792b8bfe0bd6a635fd1a908ef9381c 256 Gene3D G3DSA:1.10.3720.10 3 256 5.1E-48 T 13-10-2018 IPR035906 MetI-like superfamily VAA_02579 6f19ce236d28ddab9cfb88f6938b03c6 80 Gene3D G3DSA:1.20.5.340 1 79 2.1E-26 T 13-10-2018 VAA_02579 6f19ce236d28ddab9cfb88f6938b03c6 80 Pfam PF06005 Cell division protein ZapB 1 77 7.9E-25 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VAA_02579 6f19ce236d28ddab9cfb88f6938b03c6 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.568 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VAA_01909 a0f91bf94c409528fb97529e4af06e8d 392 SUPERFAMILY SSF58104 103 366 9.55E-37 T 13-10-2018 VAA_01909 a0f91bf94c409528fb97529e4af06e8d 392 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 173 314 2.1E-24 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01909 a0f91bf94c409528fb97529e4af06e8d 392 SMART SM00283 97 372 1.3E-5 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_01909 a0f91bf94c409528fb97529e4af06e8d 392 Gene3D G3DSA:1.10.287.950 55 375 8.7E-33 T 13-10-2018 VAA_03288 36667c09394d6629900dcc771481b680 194 Pfam PF01810 LysE type translocator 17 187 1.6E-16 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_00811 13ef1c9090b0f3e7a6bae52e62b00955 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 417 4.5E-44 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_00811 13ef1c9090b0f3e7a6bae52e62b00955 453 PIRSF PIRSF006603 4 441 6.4E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_00811 13ef1c9090b0f3e7a6bae52e62b00955 453 Pfam PF01554 MatE 22 183 1.3E-19 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_00811 13ef1c9090b0f3e7a6bae52e62b00955 453 Pfam PF01554 MatE 246 406 8.3E-13 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_01524 eabc605d8c83eae268eb6b62cc3b66bc 262 Pfam PF01764 Lipase (class 3) 60 204 1.5E-27 T 13-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VAA_01524 eabc605d8c83eae268eb6b62cc3b66bc 262 SUPERFAMILY SSF53474 9 247 2.44E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01524 eabc605d8c83eae268eb6b62cc3b66bc 262 Gene3D G3DSA:3.40.50.1820 7 235 4.3E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_01228 f73b44a0a948a2ac3300f51f0fddda72 66 SUPERFAMILY SSF46955 2 55 2.38E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VAA_01228 f73b44a0a948a2ac3300f51f0fddda72 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 52 7.4E-26 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VAA_01983 a6c6103fb4333be2581c998b62e7d556 312 Pfam PF13084 Domain of unknown function (DUF3943) 149 258 2.1E-37 T 13-10-2018 IPR025079 Domain of unknown function DUF3943 VAA_00313 98f0494b3abceb0139c7e81086d2ebdd 94 Pfam PF01527 Transposase 5 73 2.1E-10 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VAA_00313 98f0494b3abceb0139c7e81086d2ebdd 94 SUPERFAMILY SSF46689 7 92 3.4E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_01282 347ac1c59bddd896577d62e0389f143c 339 Pfam PF13609 Gram-negative porin 15 317 1.7E-24 T 13-10-2018 VAA_01282 347ac1c59bddd896577d62e0389f143c 339 SUPERFAMILY SSF56935 30 339 3.66E-52 T 13-10-2018 VAA_01282 347ac1c59bddd896577d62e0389f143c 339 Gene3D G3DSA:2.40.160.10 30 339 2.7E-58 T 13-10-2018 IPR023614 Porin domain superfamily VAA_01433 7ff67e565ddc1a3ab402dbc17cf921be 341 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 68 334 7.7E-71 T 13-10-2018 IPR006507 Uncharacterised protein family UPF0283 VAA_01433 7ff67e565ddc1a3ab402dbc17cf921be 341 Pfam PF05128 Domain of unknown function (DUF697) 177 335 2.0E-50 T 13-10-2018 IPR021147 Protein of unknown function DUF697 VAA_00338 6957255ab0929369a94fa5c4217dd339 464 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 29 461 6.3E-82 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAA_00338 6957255ab0929369a94fa5c4217dd339 464 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 460 3.4E-48 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VAA_03194 99eef5b9c522b14316badd67c199e8d4 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.504 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 VAA_03194 99eef5b9c522b14316badd67c199e8d4 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 2.3E-186 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 VAA_01309 c6d8f52bee2ae50f07a9daa57c6b36df 233 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 225 233 - T 13-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 VAA_01309 c6d8f52bee2ae50f07a9daa57c6b36df 233 SUPERFAMILY SSF56925 42 233 1.81E-32 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VAA_01309 c6d8f52bee2ae50f07a9daa57c6b36df 233 Pfam PF03922 OmpW family 42 233 3.2E-71 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 VAA_01309 c6d8f52bee2ae50f07a9daa57c6b36df 233 Gene3D G3DSA:2.40.160.20 41 233 7.5E-80 T 13-10-2018 VAA_02112 c3e339794336cf9164a48df36b84b418 183 Pfam PF17323 Trans-membrane regulatory protein ToxS 33 181 3.7E-71 T 13-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VAA_02112 c3e339794336cf9164a48df36b84b418 183 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 13 183 8.0E-86 T 13-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VAA_02129 ebacf18cdb516a95c1df5e72fb0c4652 196 SUPERFAMILY SSF48150 17 194 2.35E-72 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VAA_02129 ebacf18cdb516a95c1df5e72fb0c4652 196 Gene3D G3DSA:1.10.340.30 16 196 5.3E-75 T 13-10-2018 VAA_02129 ebacf18cdb516a95c1df5e72fb0c4652 196 Pfam PF03352 Methyladenine glycosylase 20 194 6.7E-73 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VAA_00979 d9b126f7feec4281cab6318787d3ca07 124 Gene3D G3DSA:3.30.1460.10 2 124 3.3E-5 T 13-10-2018 VAA_00979 d9b126f7feec4281cab6318787d3ca07 124 SUPERFAMILY SSF69635 6 121 9.42E-7 T 13-10-2018 VAA_02932 116d9daefde5714814c7028ca5917d26 136 SUPERFAMILY SSF63520 16 87 1.1E-6 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 VAA_02308 1ba040d4af49f32d65803b59e3bee304 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 44.386 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 VAA_02308 1ba040d4af49f32d65803b59e3bee304 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 458 2.4E-152 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 VAA_00867 43a02e8185bb679792fa34421187c8b7 312 Pfam PF01063 Amino-transferase class IV 36 268 3.2E-46 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VAA_00867 43a02e8185bb679792fa34421187c8b7 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 3.7E-143 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VAA_00867 43a02e8185bb679792fa34421187c8b7 312 Gene3D G3DSA:3.20.10.10 138 289 1.1E-105 T 13-10-2018 VAA_00867 43a02e8185bb679792fa34421187c8b7 312 SUPERFAMILY SSF56752 7 307 6.54E-103 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VAA_00867 43a02e8185bb679792fa34421187c8b7 312 Gene3D G3DSA:3.30.470.10 10 127 1.1E-105 T 13-10-2018 VAA_00867 43a02e8185bb679792fa34421187c8b7 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VAA_01682 5d95ab04cc84c964599ab6b4f28fd3aa 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_01682 5d95ab04cc84c964599ab6b4f28fd3aa 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 6.6E-44 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01682 5d95ab04cc84c964599ab6b4f28fd3aa 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.0E-40 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01682 5d95ab04cc84c964599ab6b4f28fd3aa 103 SUPERFAMILY SSF141091 1 102 1.06E-38 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_01682 5d95ab04cc84c964599ab6b4f28fd3aa 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.34 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_02510 8c8e03294748c113a37fc9751a63e8b6 232 Gene3D G3DSA:2.40.360.10 19 231 7.2E-63 T 13-10-2018 IPR023373 YmcC-like superfamily VAA_02510 8c8e03294748c113a37fc9751a63e8b6 232 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 17 220 8.6E-58 T 13-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VAA_02510 8c8e03294748c113a37fc9751a63e8b6 232 SUPERFAMILY SSF159270 21 227 1.57E-58 T 13-10-2018 IPR023373 YmcC-like superfamily VAA_04004 3dcbfc943d929fce028f17f08716de34 1360 Gene3D G3DSA:3.30.200.20 1221 1307 8.8E-6 T 13-10-2018 VAA_04004 3dcbfc943d929fce028f17f08716de34 1360 SUPERFAMILY SSF56112 1227 1360 8.39E-5 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_03606 5c0c1d3c2818c82d3d47137334fa0e2f 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 9.0E-70 T 13-10-2018 IPR021307 Protein of unknown function DUF2884 VAA_03393 265bba65c7788f33e1b89979bf40d4d2 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 1.3E-35 T 13-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VAA_03393 265bba65c7788f33e1b89979bf40d4d2 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 1.8E-9 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAA_03393 265bba65c7788f33e1b89979bf40d4d2 154 PIRSF PIRSF000709 1 87 0.0075 T 13-10-2018 VAA_03393 265bba65c7788f33e1b89979bf40d4d2 154 SUPERFAMILY SSF53254 1 153 4.52E-21 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VAA_03393 265bba65c7788f33e1b89979bf40d4d2 154 SMART SM00855 2 116 5.2E-6 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VAA_03393 265bba65c7788f33e1b89979bf40d4d2 154 Gene3D G3DSA:3.40.50.1240 1 154 1.5E-34 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VAA_00886 45e10af85c077f3fa410a22650e80271 434 SUPERFAMILY SSF53613 33 417 3.87E-41 T 13-10-2018 IPR029056 Ribokinase-like VAA_00886 45e10af85c077f3fa410a22650e80271 434 Pfam PF00294 pfkB family carbohydrate kinase 140 297 2.0E-9 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VAA_04057 55d6d2396268c8a59e37ca6c2ec6bb4b 180 Gene3D G3DSA:3.40.50.300 1 178 6.2E-5 T 13-10-2018 VAA_04057 55d6d2396268c8a59e37ca6c2ec6bb4b 180 SUPERFAMILY SSF52540 3 150 1.69E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_00931 b4148e50a9ae2cef66b7db19edbcc458 84 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 28 81 1.0E-21 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VAA_00931 b4148e50a9ae2cef66b7db19edbcc458 84 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 17 81 1.7E-30 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VAA_02373 fdc48a22eecd3e4a2ef75d085735dd7f 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 2.3E-109 T 13-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VAA_02373 fdc48a22eecd3e4a2ef75d085735dd7f 252 Gene3D G3DSA:3.40.50.1580 1 252 2.1E-80 T 13-10-2018 VAA_02373 fdc48a22eecd3e4a2ef75d085735dd7f 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VAA_02373 fdc48a22eecd3e4a2ef75d085735dd7f 252 Pfam PF01048 Phosphorylase superfamily 20 246 1.4E-39 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VAA_02373 fdc48a22eecd3e4a2ef75d085735dd7f 252 SUPERFAMILY SSF53167 4 251 1.44E-71 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 Gene3D G3DSA:3.40.50.720 1 258 2.4E-62 T 13-10-2018 VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.0E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 Pfam PF00106 short chain dehydrogenase 3 197 8.7E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_01031 2e184707cbf2d05843ffebfb49dd75a2 259 SUPERFAMILY SSF51735 3 258 6.06E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02378 f50eaae270b405f1b576cf46d2b2b953 157 Pfam PF02391 MoaE protein 11 120 7.8E-38 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VAA_02378 f50eaae270b405f1b576cf46d2b2b953 157 SUPERFAMILY SSF54690 5 150 1.7E-55 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VAA_02378 f50eaae270b405f1b576cf46d2b2b953 157 Gene3D G3DSA:3.90.1170.40 1 150 1.2E-55 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VAA_02659 6be58a8e02290dddaf3e0ca9192125f6 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 9.5E-20 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VAA_02659 6be58a8e02290dddaf3e0ca9192125f6 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 1.4E-32 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VAA_03996 038d12311d0f210dbf2d1c3424ecb060 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 4.5E-15 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VAA_00215 3ae15c38ca451505571970c51e812321 171 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 13-10-2018 IPR022272 Lipocalin family conserved site VAA_00215 3ae15c38ca451505571970c51e812321 171 PIRSF PIRSF036893 1 171 2.0E-42 T 13-10-2018 IPR022271 Lipocalin, ApoD type VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 29 43 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 99 113 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 46 62 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 116 124 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 159 169 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 132 143 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR01171 Bacterial lipocalin signature 65 74 6.0E-40 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR00179 Lipocalin signature 113 125 2.0E-5 T 13-10-2018 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR00179 Lipocalin signature 136 151 2.0E-5 T 13-10-2018 VAA_00215 3ae15c38ca451505571970c51e812321 171 PRINTS PR00179 Lipocalin signature 32 44 2.0E-5 T 13-10-2018 VAA_00215 3ae15c38ca451505571970c51e812321 171 Pfam PF08212 Lipocalin-like domain 30 170 1.2E-41 T 13-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VAA_00215 3ae15c38ca451505571970c51e812321 171 Gene3D G3DSA:2.40.128.20 10 171 1.4E-52 T 13-10-2018 IPR012674 Calycin VAA_00215 3ae15c38ca451505571970c51e812321 171 SUPERFAMILY SSF50814 4 170 1.12E-51 T 13-10-2018 IPR012674 Calycin VAA_03914 40e71f0fef5d7ea5188fc774fda1747d 88 Pfam PF04519 Polymer-forming cytoskeletal 3 66 3.4E-16 T 13-10-2018 IPR007607 Bactofilin A/B VAA_02716 a33ce0a49483ee1da94c8d9918c124eb 419 Pfam PF02687 FtsX-like permease family 317 410 2.6E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_02716 a33ce0a49483ee1da94c8d9918c124eb 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 8.2E-10 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VAA_02917 5894d03ea6c7f0c17b56229eac9053b2 307 Gene3D G3DSA:2.40.440.10 19 298 8.6E-84 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAA_02917 5894d03ea6c7f0c17b56229eac9053b2 307 Pfam PF01476 LysM domain 40 71 7.0E-6 T 13-10-2018 IPR018392 LysM domain VAA_02917 5894d03ea6c7f0c17b56229eac9053b2 307 Pfam PF03734 L,D-transpeptidase catalytic domain 96 230 5.2E-22 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VAA_02917 5894d03ea6c7f0c17b56229eac9053b2 307 SMART SM00257 39 83 1.8E-5 T 13-10-2018 IPR018392 LysM domain VAA_02917 5894d03ea6c7f0c17b56229eac9053b2 307 SUPERFAMILY SSF54106 38 83 3.53E-6 T 13-10-2018 VAA_02917 5894d03ea6c7f0c17b56229eac9053b2 307 SUPERFAMILY SSF141523 96 230 5.23E-29 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VAA_03304 ef9086510ccdd497d538c6ae13bc77e2 154 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 136 2.4E-42 T 13-10-2018 IPR039366 YscW/ExsB VAA_00030 3e8d7afc9c9f69ec73ca554cb8354f7b 104 Gene3D G3DSA:1.10.1220.10 12 86 4.0E-7 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VAA_00030 3e8d7afc9c9f69ec73ca554cb8354f7b 104 Pfam PF04221 RelB antitoxin 15 54 7.7E-5 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ VAA_01631 b25fa9d6e747ed177bc01c096f54f2ab 244 Gene3D G3DSA:3.40.1280.10 97 244 1.0E-38 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VAA_01631 b25fa9d6e747ed177bc01c096f54f2ab 244 SUPERFAMILY SSF75217 96 243 4.58E-32 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VAA_01631 b25fa9d6e747ed177bc01c096f54f2ab 244 SUPERFAMILY SSF55315 4 93 7.53E-12 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like VAA_01631 b25fa9d6e747ed177bc01c096f54f2ab 244 Gene3D G3DSA:3.30.1330.30 1 93 2.8E-17 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like VAA_01631 b25fa9d6e747ed177bc01c096f54f2ab 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.7E-27 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VAA_01900 02439f3c6c9c32387c9dad35fddb9a98 87 SUPERFAMILY SSF52091 5 85 1.29E-9 T 13-10-2018 IPR036513 STAS domain superfamily VAA_01900 02439f3c6c9c32387c9dad35fddb9a98 87 Gene3D G3DSA:3.30.750.24 3 86 5.2E-9 T 13-10-2018 IPR036513 STAS domain superfamily VAA_01900 02439f3c6c9c32387c9dad35fddb9a98 87 Pfam PF13466 STAS domain 5 81 2.6E-12 T 13-10-2018 IPR002645 STAS domain VAA_02038 e9c0b7f8e33e249906916688811b8d99 135 Gene3D G3DSA:3.10.129.10 2 134 1.8E-23 T 13-10-2018 VAA_02038 e9c0b7f8e33e249906916688811b8d99 135 SUPERFAMILY SSF54637 8 131 4.17E-26 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_02038 e9c0b7f8e33e249906916688811b8d99 135 Pfam PF03061 Thioesterase superfamily 50 111 1.4E-7 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VAA_00989 6e2665998750d90594ca217542afee72 194 SUPERFAMILY SSF52218 1 193 1.05E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00989 6e2665998750d90594ca217542afee72 194 Gene3D G3DSA:3.40.50.360 1 193 5.0E-63 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_00989 6e2665998750d90594ca217542afee72 194 Pfam PF02525 Flavodoxin-like fold 3 188 5.8E-35 T 13-10-2018 IPR003680 Flavodoxin-like fold VAA_01916 438d9ac8ecb42c39c25d885766e1a20d 221 Gene3D G3DSA:3.10.620.30 22 212 1.9E-75 T 13-10-2018 VAA_01916 438d9ac8ecb42c39c25d885766e1a20d 221 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 55 164 4.9E-14 T 13-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VAA_00994 861ec1424c94f9f01ccd9a8ae6f4b7bc 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 4.0E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VAA_00994 861ec1424c94f9f01ccd9a8ae6f4b7bc 368 Gene3D G3DSA:2.40.50.100 57 247 1.1E-39 T 13-10-2018 VAA_00994 861ec1424c94f9f01ccd9a8ae6f4b7bc 368 SUPERFAMILY SSF111369 122 284 2.62E-8 T 13-10-2018 VAA_00994 861ec1424c94f9f01ccd9a8ae6f4b7bc 368 SUPERFAMILY SSF111369 56 146 6.93E-11 T 13-10-2018 VAA_00994 861ec1424c94f9f01ccd9a8ae6f4b7bc 368 Gene3D G3DSA:2.40.30.170 248 289 1.1E-39 T 13-10-2018 VAA_00994 861ec1424c94f9f01ccd9a8ae6f4b7bc 368 Gene3D G3DSA:1.10.287.470 90 212 1.1E-39 T 13-10-2018 VAA_02008 1c75d09d32f3a4daa4fa4a037fcb0eb0 206 PIRSF PIRSF006324 1 206 1.1E-43 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_02008 1c75d09d32f3a4daa4fa4a037fcb0eb0 206 Pfam PF01810 LysE type translocator 15 205 1.7E-26 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 8 257 3.4E-111 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 255 8.1E-48 T 13-10-2018 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 234 253 1.0E-52 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 12 29 1.0E-52 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 208 227 1.0E-52 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 104 124 1.0E-52 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 84 101 1.0E-52 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 169 192 1.0E-52 T 13-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 SUPERFAMILY SSF51735 6 256 6.54E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VAA_02392 3840e14645c8c59a6507d1020f9fe04f 258 Gene3D G3DSA:3.40.50.720 4 257 2.3E-63 T 13-10-2018 VAA_04070 37ec9f3d493fa50f3af36bff020b995f 106 Pfam PF05717 IS66 Orf2 like protein 9 102 1.9E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_03165 e99602fcba61d096ed4aceac88389808 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.7E-62 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.1E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.1E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.1E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.1E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.1E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.012 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_03165 e99602fcba61d096ed4aceac88389808 173 SUPERFAMILY SSF53098 3 156 6.83E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_03165 e99602fcba61d096ed4aceac88389808 173 Gene3D G3DSA:3.30.420.10 2 159 3.3E-52 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03165 e99602fcba61d096ed4aceac88389808 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VAA_03165 e99602fcba61d096ed4aceac88389808 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 8.0E-75 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VAA_01108 79ab3f63aed0f3ae57e8e3d78158cba2 199 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 185 1.1E-32 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT VAA_01712 5e496ac5cbe0c040cf1380667027bc23 481 SUPERFAMILY SSF111283 18 480 3.01E-129 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VAA_01712 5e496ac5cbe0c040cf1380667027bc23 481 PIRSF PIRSF004919 15 481 4.1E-143 T 13-10-2018 IPR025502 TldD VAA_01712 5e496ac5cbe0c040cf1380667027bc23 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.4E-64 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VAA_01712 5e496ac5cbe0c040cf1380667027bc23 481 Gene3D G3DSA:3.30.2290.10 9 240 1.3E-15 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VAA_00372 5b3d78804a070e23734ef6d24d28a544 269 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 53 268 1.9E-101 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VAA_00372 5b3d78804a070e23734ef6d24d28a544 269 Gene3D G3DSA:3.40.600.10 44 269 3.6E-54 T 13-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VAA_00372 5b3d78804a070e23734ef6d24d28a544 269 Pfam PF02976 DNA mismatch repair enzyme MutH 101 199 7.4E-34 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VAA_00372 5b3d78804a070e23734ef6d24d28a544 269 SUPERFAMILY SSF52980 49 268 2.09E-82 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_00372 5b3d78804a070e23734ef6d24d28a544 269 SMART SM00927 101 199 5.4E-65 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VAA_00372 5b3d78804a070e23734ef6d24d28a544 269 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 19 269 142.548 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VAA_02857 36a74a3c19feb0d7de52d93348594793 318 Pfam PF03547 Membrane transport protein 169 307 1.5E-12 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VAA_02465 9d6bd92008d3ddb9e8ca4d368e0db9fa 291 SUPERFAMILY SSF53448 21 289 5.25E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02465 9d6bd92008d3ddb9e8ca4d368e0db9fa 291 Pfam PF00535 Glycosyl transferase family 2 26 152 1.4E-14 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_02465 9d6bd92008d3ddb9e8ca4d368e0db9fa 291 Pfam PF02709 N-terminal domain of galactosyltransferase 192 255 1.6E-11 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 VAA_02465 9d6bd92008d3ddb9e8ca4d368e0db9fa 291 Gene3D G3DSA:3.90.550.10 10 270 3.9E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_01602 062062b983c7447e9704e8e9ac5c9cd1 317 SUPERFAMILY SSF64182 8 313 1.29E-10 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VAA_01602 062062b983c7447e9704e8e9ac5c9cd1 317 PIRSF PIRSF028235 8 317 4.1E-190 T 13-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 VAA_03274 68d740eef173079d2206defb3761360c 257 Pfam PF06629 MltA-interacting protein MipA 59 257 2.1E-42 T 13-10-2018 IPR010583 MltA-interacting MipA VAA_02934 69862fe8405fd08e0730d12a58c132b8 250 Pfam PF12262 Bacterial virulence factor lipase N-terminal 3 242 7.7E-103 T 13-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VAA_02352 ec47c9ba4492d75e6c9f0daa8fee3cab 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.486 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAA_02352 ec47c9ba4492d75e6c9f0daa8fee3cab 109 SUPERFAMILY SSF82607 11 103 1.12E-36 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VAA_02352 ec47c9ba4492d75e6c9f0daa8fee3cab 109 Gene3D G3DSA:3.30.1310.10 1 109 1.2E-47 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VAA_02352 ec47c9ba4492d75e6c9f0daa8fee3cab 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.8E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAA_02352 ec47c9ba4492d75e6c9f0daa8fee3cab 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.1E-39 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAA_02352 ec47c9ba4492d75e6c9f0daa8fee3cab 109 PIRSF PIRSF004555 3 109 9.8E-40 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VAA_02615 b27f3ed6dffaad86cfa4a5e6b977958f 194 Pfam PF10400 Virulence activator alpha C-term 107 191 8.9E-13 T 13-10-2018 IPR018309 Transcription regulator PadR, C-terminal VAA_02615 b27f3ed6dffaad86cfa4a5e6b977958f 194 Pfam PF03551 Transcriptional regulator PadR-like family 22 95 7.2E-16 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal VAA_02615 b27f3ed6dffaad86cfa4a5e6b977958f 194 SUPERFAMILY SSF46785 18 193 1.23E-44 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02615 b27f3ed6dffaad86cfa4a5e6b977958f 194 Gene3D G3DSA:1.10.10.10 16 104 6.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_03563 2114ea76a43e098e99ed32da96c54f81 213 Hamap MF_00052_B Ribonuclease HII [rnhB]. 27 206 37.496 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 VAA_03563 2114ea76a43e098e99ed32da96c54f81 213 Gene3D G3DSA:3.30.420.10 4 213 1.8E-77 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VAA_03563 2114ea76a43e098e99ed32da96c54f81 213 SUPERFAMILY SSF53098 21 211 1.97E-69 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_03563 2114ea76a43e098e99ed32da96c54f81 213 Pfam PF01351 Ribonuclease HII 29 205 6.1E-37 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain VAA_03947 54018a51484f4b27b325050da9ca928a 134 Pfam PF05717 IS66 Orf2 like protein 9 103 2.9E-32 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_02212 c0019ebcc6c7f92df223d6912cc7df8f 173 SMART SM00448 12 133 3.6E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02212 c0019ebcc6c7f92df223d6912cc7df8f 173 SUPERFAMILY SSF52172 9 152 4.27E-20 T 13-10-2018 IPR011006 CheY-like superfamily VAA_02212 c0019ebcc6c7f92df223d6912cc7df8f 173 Pfam PF00072 Response regulator receiver domain 14 133 2.7E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VAA_02212 c0019ebcc6c7f92df223d6912cc7df8f 173 Gene3D G3DSA:3.40.50.2300 5 147 1.0E-17 T 13-10-2018 VAA_01361 df6b55c05eedfb7a102ba8f193896210 120 SUPERFAMILY SSF55298 1 115 7.38E-27 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_01361 df6b55c05eedfb7a102ba8f193896210 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 1.1E-19 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VAA_01361 df6b55c05eedfb7a102ba8f193896210 120 Gene3D G3DSA:3.30.1330.40 1 118 2.9E-31 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 Gene3D G3DSA:1.10.3860.10 3 427 6.9E-141 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 SUPERFAMILY SSF118215 12 410 2.22E-121 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 336 355 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 59 79 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 234 253 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 4.0E-53 T 13-10-2018 VAA_02794 2c09d835714627e3d67ceb4ad6fef7d6 437 Pfam PF00375 Sodium:dicarboxylate symporter family 12 408 6.3E-131 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VAA_01745 76f0bafbab13c1ceb4f06f731478d55e 131 SUPERFAMILY SSF54631 22 129 3.29E-14 T 13-10-2018 VAA_01745 76f0bafbab13c1ceb4f06f731478d55e 131 Gene3D G3DSA:3.10.580.10 18 130 2.6E-13 T 13-10-2018 VAA_00442 b212f67edd2c625e7ec3c1843ff16d0c 101 Gene3D G3DSA:1.10.443.10 1 84 1.1E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_00442 b212f67edd2c625e7ec3c1843ff16d0c 101 Pfam PF00589 Phage integrase family 2 66 2.6E-6 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VAA_00442 b212f67edd2c625e7ec3c1843ff16d0c 101 SUPERFAMILY SSF56349 2 77 5.0E-8 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_02803 7073a18317dd2b267e5b28eb0dce00ec 517 SUPERFAMILY SSF48173 232 503 2.49E-62 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VAA_02803 7073a18317dd2b267e5b28eb0dce00ec 517 Gene3D G3DSA:3.40.50.620 9 233 1.5E-94 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VAA_02803 7073a18317dd2b267e5b28eb0dce00ec 517 Gene3D G3DSA:1.10.10.1710 451 517 2.0E-24 T 13-10-2018 VAA_02803 7073a18317dd2b267e5b28eb0dce00ec 517 Gene3D G3DSA:1.10.579.10 330 450 8.4E-54 T 13-10-2018 VAA_02803 7073a18317dd2b267e5b28eb0dce00ec 517 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 8 225 6.5E-66 T 13-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VAA_02803 7073a18317dd2b267e5b28eb0dce00ec 517 Gene3D G3DSA:1.25.40.80 133 326 1.5E-94 T 13-10-2018 VAA_03023 89c74bfc60dea33f57afbc239be12198 380 Gene3D G3DSA:1.25.40.590 48 202 1.2E-41 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VAA_03023 89c74bfc60dea33f57afbc239be12198 380 Pfam PF09850 Type VI secretion system protein DotU 50 249 2.9E-46 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VAA_03023 89c74bfc60dea33f57afbc239be12198 380 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 50 254 7.8E-42 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VAA_03352 ae1ba78e372c3e1417f93eb1d22d1163 291 SUPERFAMILY SSF103481 48 143 2.62E-6 T 13-10-2018 VAA_03352 ae1ba78e372c3e1417f93eb1d22d1163 291 SUPERFAMILY SSF103481 197 291 5.36E-6 T 13-10-2018 VAA_03217 78a9522c29fa6aabc86f96b12a61865d 463 SUPERFAMILY SSF48452 128 263 2.53E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03217 78a9522c29fa6aabc86f96b12a61865d 463 Gene3D G3DSA:1.25.40.10 127 273 4.3E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_01395 a34c5764fa6fcd077560177c10709a21 420 Pfam PF09375 Imelysin 40 398 3.3E-96 T 13-10-2018 IPR018976 Imelysin-like domain VAA_01395 a34c5764fa6fcd077560177c10709a21 420 Gene3D G3DSA:1.20.1420.20 10 403 3.8E-83 T 13-10-2018 IPR038352 Imelysin-like domain superfamily VAA_02419 efa0a9346e4719be31d0a7df74e1e6e5 282 Pfam PF01380 SIS domain 132 257 1.2E-17 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VAA_02419 efa0a9346e4719be31d0a7df74e1e6e5 282 Gene3D G3DSA:1.10.10.10 1 76 3.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02419 efa0a9346e4719be31d0a7df74e1e6e5 282 Gene3D G3DSA:3.40.50.10490 97 278 1.8E-39 T 13-10-2018 VAA_02419 efa0a9346e4719be31d0a7df74e1e6e5 282 SUPERFAMILY SSF53697 99 276 3.93E-37 T 13-10-2018 VAA_02419 efa0a9346e4719be31d0a7df74e1e6e5 282 SUPERFAMILY SSF46689 1 77 2.87E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_02419 efa0a9346e4719be31d0a7df74e1e6e5 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 2.4E-23 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VAA_00622 ff0d9ef9b96048724768e52ff94737b1 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAA_00622 ff0d9ef9b96048724768e52ff94737b1 463 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 2.5E-131 T 13-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 VAA_00622 ff0d9ef9b96048724768e52ff94737b1 463 Pfam PF00860 Permease family 24 416 1.7E-99 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VAA_00622 ff0d9ef9b96048724768e52ff94737b1 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 446 1.4E-126 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAA_01339 0434703ca6d675bbcc219d3ccb62fe98 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 273 1.5E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01339 0434703ca6d675bbcc219d3ccb62fe98 288 Gene3D G3DSA:1.10.3720.10 13 279 1.6E-56 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01339 0434703ca6d675bbcc219d3ccb62fe98 288 SUPERFAMILY SSF161098 19 288 7.06E-62 T 13-10-2018 IPR035906 MetI-like superfamily VAA_03271 034fa6bcba62af0af5de2e2166237a64 154 PIRSF PIRSF020565 1 154 7.0E-59 T 13-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VAA_03271 034fa6bcba62af0af5de2e2166237a64 154 SUPERFAMILY SSF54637 5 142 2.24E-28 T 13-10-2018 IPR029069 HotDog domain superfamily VAA_03271 034fa6bcba62af0af5de2e2166237a64 154 Gene3D G3DSA:3.10.129.10 2 143 1.7E-22 T 13-10-2018 VAA_01388 db10075348a8d2fd89dd6f301907ed09 235 Pfam PF01618 MotA/TolQ/ExbB proton channel family 96 194 4.1E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VAA_03160 12288793688402d8d5014dc60d62d2a6 378 PIRSF PIRSF000267 2 377 1.4E-124 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAA_03160 12288793688402d8d5014dc60d62d2a6 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.7E-172 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAA_03160 12288793688402d8d5014dc60d62d2a6 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.2E-108 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VAA_01639 eced5924e40f28cc07739d97314353c3 290 Pfam PF02698 DUF218 domain 8 132 1.0E-12 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VAA_02956 fa3c6b7aa3de817344b6ba076cba50d6 204 Pfam PF01810 LysE type translocator 15 202 1.7E-33 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_02044 c726f8666c05d987d38d41bbefd6e822 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 324 9.1E-49 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAA_03176 743e368d78d79770df9f732abd066ba6 56 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 1.5E-23 T 13-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VAA_01292 26144d100b7bb8f9b3b818188000d5ef 103 SUPERFAMILY SSF81296 19 100 7.93E-14 T 13-10-2018 IPR014756 Immunoglobulin E-set VAA_01292 26144d100b7bb8f9b3b818188000d5ef 103 Gene3D G3DSA:2.60.40.10 9 103 2.4E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_01913 732d560819f68fda818e7d8e010f3ddf 558 SUPERFAMILY SSF63848 280 311 8.5E-5 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VAA_01913 732d560819f68fda818e7d8e010f3ddf 558 Pfam PF03961 Flagellar Assembly Protein A 81 544 1.1E-118 T 13-10-2018 IPR005646 Flagellar assembly protein A VAA_02516 31c2e5821c15d71bfb7c9df621ef4e0b 403 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 290 401 6.7E-11 T 13-10-2018 IPR029468 O-antigen polysaccharide polymerase Wzy VAA_02516 31c2e5821c15d71bfb7c9df621ef4e0b 403 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 19 391 1.3E-31 T 13-10-2018 VAA_03035 580b426a45e5e603781c42b169d1ab0c 138 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 12 132 5.7E-17 T 13-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VAA_03035 580b426a45e5e603781c42b169d1ab0c 138 SUPERFAMILY SSF160719 60 111 4.05E-5 T 13-10-2018 VAA_03035 580b426a45e5e603781c42b169d1ab0c 138 Pfam PF04965 Gene 25-like lysozyme 17 110 1.9E-7 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VAA_03000 ab1b2224508a2abee0220fe9e23a5670 307 Gene3D G3DSA:3.40.50.1980 29 284 6.0E-92 T 13-10-2018 VAA_03000 ab1b2224508a2abee0220fe9e23a5670 307 Pfam PF01497 Periplasmic binding protein 45 278 2.3E-17 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VAA_03000 ab1b2224508a2abee0220fe9e23a5670 307 SUPERFAMILY SSF53807 22 285 1.02E-55 T 13-10-2018 VAA_03000 ab1b2224508a2abee0220fe9e23a5670 307 Gene3D G3DSA:3.40.50.1980 175 278 6.0E-92 T 13-10-2018 VAA_02599 f540dc3bb20544b3dfc7e02b92f7936d 205 Gene3D G3DSA:1.10.10.10 2 87 1.0E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_02599 f540dc3bb20544b3dfc7e02b92f7936d 205 SUPERFAMILY SSF46785 6 183 1.59E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_02599 f540dc3bb20544b3dfc7e02b92f7936d 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.3E-7 T 13-10-2018 VAA_03632 0900a05cdece58a4daf0bd7db82826dd 155 Pfam PF11012 Protein of unknown function (DUF2850) 68 146 1.0E-31 T 13-10-2018 IPR021271 Protein of unknown function DUF2850 VAA_02889 84c96ffa579dccfa406caa0f6a717737 355 SUPERFAMILY SSF56281 38 295 3.93E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_02889 84c96ffa579dccfa406caa0f6a717737 355 Gene3D G3DSA:3.60.15.10 3 355 7.1E-110 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VAA_02889 84c96ffa579dccfa406caa0f6a717737 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 9.4E-11 T 13-10-2018 VAA_01327 529319a78b35acebb669b8c25f0b24a4 175 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 7 175 9.3E-60 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 VAA_03778 69447507f9651b27a9430610d4f56625 156 PIRSF PIRSF004923 1 156 3.9E-39 T 13-10-2018 IPR026268 Protein RseC VAA_03778 69447507f9651b27a9430610d4f56625 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 16 149 3.0E-33 T 13-10-2018 VAA_03279 ef514dbca96cf9bab3ed4578113d6495 177 Gene3D G3DSA:3.40.50.300 2 168 5.2E-66 T 13-10-2018 VAA_03279 ef514dbca96cf9bab3ed4578113d6495 177 Pfam PF01202 Shikimate kinase 13 162 8.9E-15 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VAA_03279 ef514dbca96cf9bab3ed4578113d6495 177 SUPERFAMILY SSF52540 3 165 1.81E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_03279 ef514dbca96cf9bab3ed4578113d6495 177 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 162 6.6E-66 T 13-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VAA_02588 f515b0d9db1bcfc9e58da4cca252c127 180 Gene3D G3DSA:3.30.70.1070 99 178 8.2E-27 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_02588 f515b0d9db1bcfc9e58da4cca252c127 180 SUPERFAMILY SSF110997 106 178 2.35E-16 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_02588 f515b0d9db1bcfc9e58da4cca252c127 180 Pfam PF05036 Sporulation related domain 106 175 3.7E-13 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAA_03645 d5b15416b99c2e9ae80917841be6c3ca 90 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 87 4.3E-24 T 13-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain VAA_03602 492b6a87b9aa890b50cd8e8962b7ee44 332 PIRSF PIRSF039012 1 301 3.5E-91 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAA_03602 492b6a87b9aa890b50cd8e8962b7ee44 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 27 293 5.2E-67 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VAA_03602 492b6a87b9aa890b50cd8e8962b7ee44 332 Gene3D G3DSA:3.40.630.10 3 296 4.5E-92 T 13-10-2018 VAA_03602 492b6a87b9aa890b50cd8e8962b7ee44 332 SUPERFAMILY SSF53187 3 294 2.61E-73 T 13-10-2018 VAA_02993 9ed245d7bdd10f1672db2d1dcf33b884 313 Pfam PF00561 alpha/beta hydrolase fold 37 185 3.1E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VAA_02993 9ed245d7bdd10f1672db2d1dcf33b884 313 Gene3D G3DSA:3.40.50.1820 30 313 4.1E-89 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_02993 9ed245d7bdd10f1672db2d1dcf33b884 313 SUPERFAMILY SSF53474 33 309 1.03E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VAA_03128 369ddc0bb1d8bd7a773dbe0d2ba2bd7c 274 Pfam PF12119 Protein of unknown function (DUF3581) 34 250 6.9E-97 T 13-10-2018 IPR021974 Protein of unknown function DUF3581 VAA_00361 0a81e6f7c004787c9e720a57c58386c1 549 Pfam PF08019 Domain of unknown function (DUF1705) 62 213 1.3E-44 T 13-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VAA_00361 0a81e6f7c004787c9e720a57c58386c1 549 SUPERFAMILY SSF53649 235 530 8.72E-20 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VAA_00361 0a81e6f7c004787c9e720a57c58386c1 549 Gene3D G3DSA:3.40.720.10 218 548 2.3E-87 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VAA_00361 0a81e6f7c004787c9e720a57c58386c1 549 Pfam PF00884 Sulfatase 240 529 4.0E-47 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 8.8E-30 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 SUPERFAMILY SSF54736 50 121 4.53E-24 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.4E-45 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.7E-16 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.537 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 Gene3D G3DSA:1.20.5.710 2 50 8.3E-24 T 13-10-2018 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 121 1.0E-15 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 Gene3D G3DSA:3.30.1390.10 51 121 9.9E-30 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VAA_00352 f926d4753ee5afa5e26a34607f270e6e 121 SUPERFAMILY SSF48300 4 57 1.2E-15 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VAA_03024 d64431aea3e87d79942b1718e3eef2a8 438 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 438 1.5E-97 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VAA_03024 d64431aea3e87d79942b1718e3eef2a8 438 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 437 7.3E-108 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VAA_03723 2ba37b761ad1d8cc176dc1a27f219c74 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.544 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VAA_03723 2ba37b761ad1d8cc176dc1a27f219c74 105 Pfam PF04999 Cell division protein FtsL 8 103 1.1E-36 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VAA_03723 2ba37b761ad1d8cc176dc1a27f219c74 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 2.3E-27 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VAA_00602 ba1bd9c853902b7ff34fbde2f9381796 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 245 6.7E-18 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_00602 ba1bd9c853902b7ff34fbde2f9381796 254 SUPERFAMILY SSF53850 33 246 1.88E-31 T 13-10-2018 VAA_00602 ba1bd9c853902b7ff34fbde2f9381796 254 Gene3D G3DSA:3.40.190.10 33 245 2.9E-21 T 13-10-2018 VAA_00602 ba1bd9c853902b7ff34fbde2f9381796 254 Gene3D G3DSA:3.40.190.10 110 207 2.9E-21 T 13-10-2018 VAA_02147 2cdeb037b59f4daf11685d5123b51c2e 58 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 7.2E-25 T 13-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VAA_02147 2cdeb037b59f4daf11685d5123b51c2e 58 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 1.4E-28 T 13-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VAA_02355 b43ccbee64efff2e7e056e7a801785b8 111 Pfam PF04304 Protein of unknown function (DUF454) 1 100 4.5E-35 T 13-10-2018 IPR007401 Protein of unknown function DUF454 VAA_02355 b43ccbee64efff2e7e056e7a801785b8 111 PIRSF PIRSF016789 1 106 8.3E-40 T 13-10-2018 IPR007401 Protein of unknown function DUF454 VAA_03019 43ee32c57371694863c9e1192d22c4c3 75 Pfam PF01527 Transposase 1 51 5.5E-7 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VAA_03019 43ee32c57371694863c9e1192d22c4c3 75 SUPERFAMILY SSF46689 1 69 6.81E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VAA_03019 43ee32c57371694863c9e1192d22c4c3 75 Gene3D G3DSA:1.10.10.60 1 66 3.9E-5 T 13-10-2018 VAA_03540 21627dcd4b2908d446893d1e57b5c0c2 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.8E-16 T 13-10-2018 IPR021494 Protein of unknown function DUF3149 VAA_01706 45719ebf9619d71bc9dd17da11642cb2 672 SUPERFAMILY SSF56349 277 488 1.38E-5 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_01706 45719ebf9619d71bc9dd17da11642cb2 672 Gene3D G3DSA:1.10.443.10 253 492 1.6E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VAA_03144 16afcff9a2a69a8722cc7c95b44b225f 511 SUPERFAMILY SSF109604 38 506 8.63E-53 T 13-10-2018 VAA_03144 16afcff9a2a69a8722cc7c95b44b225f 511 SMART SM00471 68 280 3.1E-7 T 13-10-2018 IPR003607 HD/PDEase domain VAA_03144 16afcff9a2a69a8722cc7c95b44b225f 511 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 36 507 4.1E-105 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VAA_03144 16afcff9a2a69a8722cc7c95b44b225f 511 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 511 45.032 T 13-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 VAA_02592 177131eb1f4d26a56ef3dfc18abc80ae 184 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 12 171 9.9E-84 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VAA_02592 177131eb1f4d26a56ef3dfc18abc80ae 184 TIGRFAM TIGR01935 NOT-MenG: RraA family 16 165 5.1E-68 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VAA_02592 177131eb1f4d26a56ef3dfc18abc80ae 184 Gene3D G3DSA:3.50.30.40 12 172 2.7E-61 T 13-10-2018 VAA_02592 177131eb1f4d26a56ef3dfc18abc80ae 184 Pfam PF03737 Aldolase/RraA 17 163 9.2E-39 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VAA_02592 177131eb1f4d26a56ef3dfc18abc80ae 184 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 12 172 48.123 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VAA_02592 177131eb1f4d26a56ef3dfc18abc80ae 184 SUPERFAMILY SSF89562 13 169 7.19E-47 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VAA_00206 832b95cb5dd779b81c6571b622ae2dbd 262 Pfam PF00899 ThiF family 10 243 2.1E-61 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VAA_00206 832b95cb5dd779b81c6571b622ae2dbd 262 Gene3D G3DSA:3.40.50.720 2 254 2.1E-86 T 13-10-2018 VAA_00206 832b95cb5dd779b81c6571b622ae2dbd 262 SUPERFAMILY SSF69572 3 249 6.02E-78 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VAA_01526 b13f24844db3c45d28b628e011376f4f 111 SUPERFAMILY SSF50022 7 110 2.78E-34 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VAA_01526 b13f24844db3c45d28b628e011376f4f 111 Gene3D G3DSA:2.102.10.10 1 111 6.0E-33 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VAA_01526 b13f24844db3c45d28b628e011376f4f 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 110 1.8E-38 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VAA_01526 b13f24844db3c45d28b628e011376f4f 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 110 1.9E-34 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VAA_00301 e2b94460a457431b8e61bd0a5f9770df 94 Gene3D G3DSA:2.60.200.60 2 94 4.5E-41 T 13-10-2018 VAA_00301 e2b94460a457431b8e61bd0a5f9770df 94 Pfam PF05488 PAAR motif 19 86 6.5E-19 T 13-10-2018 IPR008727 PAAR motif VAA_03495 0995056ccca79c97ebf41a5ca2e9b971 434 Pfam PF00860 Permease family 18 386 2.8E-92 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VAA_03495 0995056ccca79c97ebf41a5ca2e9b971 434 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 410 1.7E-112 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAA_03495 0995056ccca79c97ebf41a5ca2e9b971 434 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 334 354 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VAA_02496 390bfbe8859353d12ee8593d0a1dbb8a 312 Gene3D G3DSA:3.90.550.10 1 208 3.0E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02496 390bfbe8859353d12ee8593d0a1dbb8a 312 SUPERFAMILY SSF53448 2 205 3.04E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02496 390bfbe8859353d12ee8593d0a1dbb8a 312 Pfam PF00535 Glycosyl transferase family 2 7 138 3.5E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VAA_03499 c9dad3c4ecd9f8d5417dfde1ec94d46a 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.0E-44 T 13-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VAA_03499 c9dad3c4ecd9f8d5417dfde1ec94d46a 269 Gene3D G3DSA:1.25.40.10 176 264 3.4E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03499 c9dad3c4ecd9f8d5417dfde1ec94d46a 269 SUPERFAMILY SSF48452 190 252 8.43E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_03499 c9dad3c4ecd9f8d5417dfde1ec94d46a 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.1E-23 T 13-10-2018 VAA_02464 1cf146c315198e39fa3eb44bba1621e8 251 Gene3D G3DSA:1.10.510.10 156 245 1.1E-14 T 13-10-2018 VAA_02464 1cf146c315198e39fa3eb44bba1621e8 251 SUPERFAMILY SSF56112 63 211 7.55E-18 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VAA_02464 1cf146c315198e39fa3eb44bba1621e8 251 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 47 229 1.2E-64 T 13-10-2018 VAA_02464 1cf146c315198e39fa3eb44bba1621e8 251 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 19 251 41.403 T 13-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VAA_1858 d8093052af2d09a8e7c773b728a62f63 58 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 2 52 6.0E-21 T 13-10-2018 IPR007040 Ribosome modulation factor VAA_1858 d8093052af2d09a8e7c773b728a62f63 58 Hamap MF_00919 Ribosome modulation factor [rmf]. 2 56 30.017 T 13-10-2018 IPR007040 Ribosome modulation factor VAA_1858 d8093052af2d09a8e7c773b728a62f63 58 Gene3D G3DSA:1.10.10.620 2 58 4.0E-29 T 13-10-2018 IPR023200 Ribosome modulation factor domain superfamily VAA_1858 d8093052af2d09a8e7c773b728a62f63 58 Pfam PF04957 Ribosome modulation factor 2 55 4.9E-28 T 13-10-2018 IPR007040 Ribosome modulation factor VAA_03087 8b1822dd8e6d7e735d5745bf301c2219 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 2.0E-5 T 13-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VAA_03087 8b1822dd8e6d7e735d5745bf301c2219 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 2.0E-5 T 13-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VAA_03087 8b1822dd8e6d7e735d5745bf301c2219 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 2.0E-5 T 13-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VAA_03087 8b1822dd8e6d7e735d5745bf301c2219 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 1.9E-45 T 13-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VAA_3129 bb15a0bdff8cf917755f3961427d1207 163 Pfam PF04191 Phospholipid methyltransferase 53 152 1.6E-14 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VAA_3129 bb15a0bdff8cf917755f3961427d1207 163 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 118 163 1.0E-10 T 13-10-2018 VAA_3129 bb15a0bdff8cf917755f3961427d1207 163 Gene3D G3DSA:1.20.120.1630 3 163 8.9E-27 T 13-10-2018 VAA_01925 bc82101147737fa6f151c5f78d182653 208 Pfam PF00474 Sodium:solute symporter family 19 148 4.6E-38 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VAA_01925 bc82101147737fa6f151c5f78d182653 208 Gene3D G3DSA:1.20.1730.10 1 207 3.3E-41 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VAA_01925 bc82101147737fa6f151c5f78d182653 208 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 130 150 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site VAA_02094 ecabed16dfbf361dfb83cd2eac11ff26 181 SUPERFAMILY SSF110997 104 177 7.19E-14 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_02094 ecabed16dfbf361dfb83cd2eac11ff26 181 Pfam PF05036 Sporulation related domain 105 170 1.9E-10 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VAA_02094 ecabed16dfbf361dfb83cd2eac11ff26 181 Gene3D G3DSA:3.30.70.1070 98 173 3.4E-8 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 SUPERFAMILY SSF55920 4 268 1.57E-86 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 Gene3D G3DSA:3.90.230.10 1 278 4.3E-105 T 13-10-2018 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 Pfam PF00557 Metallopeptidase family M24 13 259 1.8E-51 T 13-10-2018 IPR000994 Peptidase M24 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.228 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 267 2.5E-89 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 4.9E-15 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 4.9E-15 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAA_03578 c88a10128a8ce79553cc4bd931f40338 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.9E-15 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VAA_04315 c0a3e515f67de8a924c612cfcfc3814c 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 1.1E-53 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAA_00820 9b0b54a97d648a030e2b8945f7748ca0 95 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VAA_00820 9b0b54a97d648a030e2b8945f7748ca0 95 Gene3D G3DSA:1.10.10.10 1 90 1.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_00820 9b0b54a97d648a030e2b8945f7748ca0 95 SUPERFAMILY SSF46785 5 86 1.36E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_03475 8400da06c93d6b6acd7f152f909dc40d 117 Pfam PF13698 Domain of unknown function (DUF4156) 25 108 1.8E-18 T 13-10-2018 IPR025294 Protein of unknown function DUF4156 VAA_03060 1e440215475826f659e256d2cc8af5d8 478 Gene3D G3DSA:1.20.1600.10 18 451 2.3E-58 T 13-10-2018 VAA_03060 1e440215475826f659e256d2cc8af5d8 478 Pfam PF02321 Outer membrane efflux protein 26 244 5.6E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_03060 1e440215475826f659e256d2cc8af5d8 478 Pfam PF02321 Outer membrane efflux protein 267 447 1.2E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VAA_03060 1e440215475826f659e256d2cc8af5d8 478 SUPERFAMILY SSF56954 2 447 1.83E-66 T 13-10-2018 VAA_01230 55e0855a74f631668363b9ab9b15ce48 224 Pfam PF11726 Inovirus Gp2 40 220 1.4E-40 T 13-10-2018 VAA_03436 57a3f1375fa2ff23abeaaf5e6cd06261 87 Pfam PF08891 YfcL protein 5 84 1.5E-30 T 13-10-2018 IPR014987 Uncharacterised protein family YfcL VAA_01737 9de3482822d56fc1ffaef2e9d39a88a1 480 SUPERFAMILY SSF53067 37 154 1.81E-11 T 13-10-2018 VAA_01737 9de3482822d56fc1ffaef2e9d39a88a1 480 PIRSF PIRSF028153 1 480 1.9E-188 T 13-10-2018 IPR016871 MSHA biogenesis protein, MshI VAA_1814 c4ff2b2745e9b2388627c37018cb9382 243 SMART SM01144 27 221 1.1E-64 T 13-10-2018 IPR005636 DTW VAA_1814 c4ff2b2745e9b2388627c37018cb9382 243 Pfam PF03942 DTW domain 29 215 8.8E-42 T 13-10-2018 IPR005636 DTW VAA_00269 03f6dfaa6d7c123d84ec9fcd9773f8b6 218 Pfam PF13505 Outer membrane protein beta-barrel domain 10 218 5.4E-12 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VAA_00269 03f6dfaa6d7c123d84ec9fcd9773f8b6 218 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 218 1.6E-57 T 13-10-2018 IPR026387 Outer membrane protein VAA_01283 669a2c1ae6c0cc71b23a6bc756e177bc 294 SUPERFAMILY SSF103481 190 288 1.7E-10 T 13-10-2018 VAA_01283 669a2c1ae6c0cc71b23a6bc756e177bc 294 SUPERFAMILY SSF103481 48 146 8.11E-9 T 13-10-2018 VAA_01283 669a2c1ae6c0cc71b23a6bc756e177bc 294 Pfam PF00892 EamA-like transporter family 11 145 1.9E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_01283 669a2c1ae6c0cc71b23a6bc756e177bc 294 Pfam PF00892 EamA-like transporter family 154 285 2.5E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VAA_00914 90a73bd332882cc312b99b9053195c3f 373 SUPERFAMILY SSF69593 81 250 6.02E-9 T 13-10-2018 VAA_00914 90a73bd332882cc312b99b9053195c3f 373 Pfam PF01553 Acyltransferase 97 246 3.8E-10 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VAA_03322 72c47203fecd05a19b5d480c11bc07e4 202 Pfam PF03942 DTW domain 3 186 3.1E-50 T 13-10-2018 IPR005636 DTW VAA_03322 72c47203fecd05a19b5d480c11bc07e4 202 SMART SM01144 1 191 1.9E-67 T 13-10-2018 IPR005636 DTW VAA_03371 a4bd68d3af8c0c74e2f14a06264ae0b5 254 PRINTS PR01805 VacJ lipoprotein signature 39 52 3.0E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAA_03371 a4bd68d3af8c0c74e2f14a06264ae0b5 254 PRINTS PR01805 VacJ lipoprotein signature 57 73 3.0E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAA_03371 a4bd68d3af8c0c74e2f14a06264ae0b5 254 PRINTS PR01805 VacJ lipoprotein signature 108 125 3.0E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAA_03371 a4bd68d3af8c0c74e2f14a06264ae0b5 254 PRINTS PR01805 VacJ lipoprotein signature 145 162 3.0E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAA_03371 a4bd68d3af8c0c74e2f14a06264ae0b5 254 Pfam PF04333 MlaA lipoprotein 39 229 2.8E-62 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VAA_02028 67d75bfd9c59cdc451af2752f4d6afdd 173 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 7 171 1.8E-50 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAA_02028 67d75bfd9c59cdc451af2752f4d6afdd 173 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 7 171 1.1E-52 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VAA_02401 d34cd149d8e4cc7d2e6cce464b0da1be 1201 SUPERFAMILY SSF52540 63 266 5.18E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VAA_02401 d34cd149d8e4cc7d2e6cce464b0da1be 1201 Gene3D G3DSA:3.40.50.300 32 129 1.3E-5 T 13-10-2018 VAA_02529 5a14da558162d85760b94d76694e2d76 118 SUPERFAMILY SSF52980 4 115 1.61E-17 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VAA_02529 5a14da558162d85760b94d76694e2d76 118 Gene3D G3DSA:3.40.960.10 16 116 5.8E-29 T 13-10-2018 VAA_02529 5a14da558162d85760b94d76694e2d76 118 Pfam PF04480 Protein of unknown function (DUF559) 8 114 9.6E-31 T 13-10-2018 IPR007569 Protein of unknown function DUF559 VAA_01949 6163dd1b042e255a211e53831dfd402a 382 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 53 381 1.7E-98 T 13-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VAA_01279 5ae9a872bb131b5d6b748cc51d54c913 257 Pfam PF03591 AzlC protein 41 179 7.1E-36 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease VAA_01575 240f45707106513de929e6fb6122860d 257 Pfam PF13531 Bacterial extracellular solute-binding protein 23 246 8.0E-38 T 13-10-2018 VAA_01575 240f45707106513de929e6fb6122860d 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 245 1.3E-58 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VAA_01575 240f45707106513de929e6fb6122860d 257 Gene3D G3DSA:3.40.190.10 25 246 1.9E-72 T 13-10-2018 VAA_01575 240f45707106513de929e6fb6122860d 257 Gene3D G3DSA:3.40.190.10 101 212 1.9E-72 T 13-10-2018 VAA_01575 240f45707106513de929e6fb6122860d 257 SUPERFAMILY SSF53850 21 246 1.45E-56 T 13-10-2018 VAA_01575 240f45707106513de929e6fb6122860d 257 PIRSF PIRSF004846 1 250 2.1E-62 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VAA_00441 0470e80c0b2b000150143e403d219743 380 Pfam PF14882 Phage-integrase repeat unit 221 270 1.6E-18 T 13-10-2018 IPR028229 Phage-integrase repeat unit VAA_00441 0470e80c0b2b000150143e403d219743 380 Pfam PF14882 Phage-integrase repeat unit 158 207 7.3E-18 T 13-10-2018 IPR028229 Phage-integrase repeat unit VAA_00441 0470e80c0b2b000150143e403d219743 380 Pfam PF14882 Phage-integrase repeat unit 95 144 1.9E-17 T 13-10-2018 IPR028229 Phage-integrase repeat unit VAA_00441 0470e80c0b2b000150143e403d219743 380 Pfam PF14882 Phage-integrase repeat unit 283 331 1.2E-17 T 13-10-2018 IPR028229 Phage-integrase repeat unit VAA_00441 0470e80c0b2b000150143e403d219743 380 Pfam PF14882 Phage-integrase repeat unit 32 78 3.2E-12 T 13-10-2018 IPR028229 Phage-integrase repeat unit VAA_00441 0470e80c0b2b000150143e403d219743 380 Pfam PF14882 Phage-integrase repeat unit 348 368 0.013 T 13-10-2018 IPR028229 Phage-integrase repeat unit VAA_01784 4f2952459d0356154f63ae90da91c85b 210 Pfam PF11523 Protein of unknown function (DUF3223) 65 141 2.1E-14 T 13-10-2018 VAA_01784 4f2952459d0356154f63ae90da91c85b 210 Gene3D G3DSA:3.10.450.40 40 149 1.8E-18 T 13-10-2018 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 Pfam PF02107 Flagellar L-ring protein 81 256 4.4E-58 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 PRINTS PR01008 Flagellar L-ring protein signature 103 115 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_03516 ce04eb11d7c3a29327a1e752bfb77f22 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 28.279 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VAA_02492 1c3ea9c276cc73de073919737128cd2a 209 Gene3D G3DSA:3.40.630.30 28 182 1.4E-15 T 13-10-2018 VAA_02492 1c3ea9c276cc73de073919737128cd2a 209 Pfam PF13420 Acetyltransferase (GNAT) domain 65 175 6.7E-9 T 13-10-2018 VAA_02492 1c3ea9c276cc73de073919737128cd2a 209 SUPERFAMILY SSF55729 44 178 1.06E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VAA_00483 fe23a8c37d3d0863ff5730032e6d7d41 69 Pfam PF01381 Helix-turn-helix 13 67 2.3E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00483 fe23a8c37d3d0863ff5730032e6d7d41 69 SMART SM00530 12 67 3.1E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VAA_00483 fe23a8c37d3d0863ff5730032e6d7d41 69 SUPERFAMILY SSF47413 6 68 3.38E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VAA_00483 fe23a8c37d3d0863ff5730032e6d7d41 69 Gene3D G3DSA:1.10.260.40 1 69 2.2E-21 T 13-10-2018 VAA_01889 7bbf3861161866a8f2f79f16c0e8acfc 401 Gene3D G3DSA:1.10.3720.10 79 187 1.3E-15 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01889 7bbf3861161866a8f2f79f16c0e8acfc 401 Gene3D G3DSA:1.10.3720.10 190 397 1.1E-31 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01889 7bbf3861161866a8f2f79f16c0e8acfc 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 9.0E-16 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VAA_01889 7bbf3861161866a8f2f79f16c0e8acfc 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 5.5E-10 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VAA_01889 7bbf3861161866a8f2f79f16c0e8acfc 401 SUPERFAMILY SSF161098 91 382 2.7E-32 T 13-10-2018 IPR035906 MetI-like superfamily VAA_01997 64f4f094be37215ac7f55dc5d73a34d5 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 1.4E-84 T 13-10-2018 IPR021316 Protein of unknown function DUF2913 VAA_01427 4ca42a450452a767fc42e6c96ba6ac7b 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 380 1.2E-16 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VAA_01280 28188ab79f04532a6add0317e3ed3807 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 3.1E-24 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VAA_03205 48487fad5dec974ca7b992f344f40609 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 2.4E-132 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VAA_03205 48487fad5dec974ca7b992f344f40609 402 Pfam PF02687 FtsX-like permease family 296 395 9.1E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_03205 48487fad5dec974ca7b992f344f40609 402 Pfam PF12704 MacB-like periplasmic core domain 29 204 1.1E-12 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VAA_02786 284c4ca06c4e1fe24aa8ee29d2959882 111 Pfam PF11280 Protein of unknown function (DUF3081) 34 107 1.1E-28 T 13-10-2018 IPR021432 Protein of unknown function DUF3081 VAA_03257 841349f63d0d1a301c51f86f77d28e9a 245 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 32 242 2.2E-75 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VAA_03257 841349f63d0d1a301c51f86f77d28e9a 245 SUPERFAMILY SSF53901 37 161 1.46E-7 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VAA_01678 7335af271252315ffd1ed4c5e6f89fee 162 Pfam PF12821 Threonine/Serine exporter, ThrE 18 152 1.1E-34 T 13-10-2018 IPR024528 Threonine/Serine exporter, ThrE VAA_00326 766ddd22303128998e63f1c70fda782c 123 Pfam PF11782 Protein of unknown function (DUF3319) 1 88 1.1E-43 T 13-10-2018 IPR021753 Protein of unknown function DUF3319 VAA_03062 14a329df5f9680b481c4162019dd53e9 169 Pfam PF13533 Biotin-lipoyl like 45 88 4.6E-12 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VAA_03062 14a329df5f9680b481c4162019dd53e9 169 Gene3D G3DSA:1.10.287.470 76 147 3.1E-14 T 13-10-2018 VAA_03062 14a329df5f9680b481c4162019dd53e9 169 SUPERFAMILY SSF111369 40 125 5.62E-8 T 13-10-2018 VAA_03062 14a329df5f9680b481c4162019dd53e9 169 Gene3D G3DSA:2.40.50.100 42 75 3.1E-14 T 13-10-2018 VAA_02936 5bca30a98f3c61571465c24522a9a98d 411 Gene3D G3DSA:2.40.160.60 22 411 1.6E-120 T 13-10-2018 VAA_02936 5bca30a98f3c61571465c24522a9a98d 411 SUPERFAMILY SSF56935 22 411 6.41E-91 T 13-10-2018 VAA_02936 5bca30a98f3c61571465c24522a9a98d 411 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 410 7.8E-128 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA_02538 a53bb14e391e579767ba8d309542b971 154 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1 119 4.5E-31 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02538 a53bb14e391e579767ba8d309542b971 154 SUPERFAMILY SSF58104 1 154 2.22E-44 T 13-10-2018 VAA_02538 a53bb14e391e579767ba8d309542b971 154 Gene3D G3DSA:1.10.287.950 1 154 1.3E-41 T 13-10-2018 VAA_02538 a53bb14e391e579767ba8d309542b971 154 SMART SM00283 1 153 1.4E-4 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VAA_02704 957d2656f2b16aaa658d4b9cd1e6993c 255 Pfam PF05742 Transport and Golgi organisation 2 10 195 3.4E-13 T 13-10-2018 IPR008551 Transport and Golgi organisation protein 2 VAA_02848 112d632769d6bb3f16232d36d7cda252 431 Pfam PF06812 ImpA, N-terminal, type VI secretion system 23 116 2.8E-8 T 13-10-2018 IPR010657 ImpA, N-terminal VAA_01371 21df4e9fb8a13234fe49d3f8bf380bd9 596 Gene3D G3DSA:2.120.10.30 48 233 2.8E-16 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VAA_01371 21df4e9fb8a13234fe49d3f8bf380bd9 596 Gene3D G3DSA:2.40.160.50 285 595 1.0E-9 T 13-10-2018 VAA_01371 21df4e9fb8a13234fe49d3f8bf380bd9 596 SUPERFAMILY SSF82171 2 227 6.08E-19 T 13-10-2018 VAA_04083 6f467516dd64167d1b0cbefcb3bd5b63 76 Gene3D G3DSA:1.20.1280.100 1 73 8.7E-38 T 13-10-2018 VAA_04083 6f467516dd64167d1b0cbefcb3bd5b63 76 Pfam PF09016 Pas factor saposin fold 1 76 2.0E-43 T 13-10-2018 IPR015106 Pas factor saposin domain VAA_01876 eb71fb5c0025d8bc6330ff813fe4e36e 724 Pfam PF02470 MlaD protein 137 194 7.3E-6 T 13-10-2018 IPR003399 Mce/MlaD VAA_01876 eb71fb5c0025d8bc6330ff813fe4e36e 724 Pfam PF02470 MlaD protein 255 345 2.6E-7 T 13-10-2018 IPR003399 Mce/MlaD VAA_01876 eb71fb5c0025d8bc6330ff813fe4e36e 724 Pfam PF02470 MlaD protein 369 432 5.4E-7 T 13-10-2018 IPR003399 Mce/MlaD VAA_01876 eb71fb5c0025d8bc6330ff813fe4e36e 724 Pfam PF02470 MlaD protein 16 107 4.4E-13 T 13-10-2018 IPR003399 Mce/MlaD VAA_01876 eb71fb5c0025d8bc6330ff813fe4e36e 724 Pfam PF02470 MlaD protein 608 682 3.5E-8 T 13-10-2018 IPR003399 Mce/MlaD VAA_02508 7302674889ee3c27380e504d52991710 736 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 45 723 4.3E-253 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VAA_01504 c5bc331ed5a820b8a8025f72f0902a2e 813 Pfam PF02687 FtsX-like permease family 721 803 4.6E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_00713 f133189b868e462eba4f75aa1b76e7cd 153 Pfam PF09335 SNARE associated Golgi protein 51 149 1.3E-12 T 13-10-2018 IPR032816 SNARE associated Golgi protein VAA_03044 6d046c6fc1d5cf9dcf3b1e1806a6b623 98 Gene3D G3DSA:2.60.200.60 35 97 6.2E-14 T 13-10-2018 VAA_03044 6d046c6fc1d5cf9dcf3b1e1806a6b623 98 Pfam PF05488 PAAR motif 24 88 9.5E-22 T 13-10-2018 IPR008727 PAAR motif VAA_01281 db003492c43e95b2d8de321fbd457868 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 178 2.5E-25 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VAA_01281 db003492c43e95b2d8de321fbd457868 204 SUPERFAMILY SSF56529 10 187 2.62E-45 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAA_01281 db003492c43e95b2d8de321fbd457868 204 Gene3D G3DSA:3.90.850.10 8 203 7.6E-46 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VAA_03761 a052b74d82366e285594d7a96e623432 255 Pfam PF16537 Type II secretion system protein B 190 249 4.7E-23 T 13-10-2018 IPR032389 Type II secretion system protein B VAA_03073 a60d0536922286499b449cf51f54f893 78 Gene3D G3DSA:3.40.30.10 5 76 4.0E-15 T 13-10-2018 VAA_03073 a60d0536922286499b449cf51f54f893 78 Pfam PF00462 Glutaredoxin 7 62 1.7E-10 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VAA_03073 a60d0536922286499b449cf51f54f893 78 ProSitePatterns PS00195 Glutaredoxin active site. 9 25 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VAA_03073 a60d0536922286499b449cf51f54f893 78 SUPERFAMILY SSF52833 6 72 6.71E-13 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_01924 c79cb50c79ce9b6e11343924dc4b161c 232 SUPERFAMILY SSF53720 10 178 1.57E-10 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VAA_01924 c79cb50c79ce9b6e11343924dc4b161c 232 Gene3D G3DSA:3.40.605.10 41 188 2.4E-9 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VAA_00031 278652f51cd3bdab7728ff0747d4a9b5 92 Gene3D G3DSA:3.30.2310.20 1 90 1.1E-15 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAA_00031 278652f51cd3bdab7728ff0747d4a9b5 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 4.2E-16 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAA_00031 278652f51cd3bdab7728ff0747d4a9b5 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 6.9E-15 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAA_03169 935548fb6f7c3be538f2c8541e04b679 131 SUPERFAMILY SSF56300 7 110 4.36E-10 T 13-10-2018 VAA_03169 935548fb6f7c3be538f2c8541e04b679 131 Gene3D G3DSA:3.60.21.10 7 119 2.8E-6 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VAA_00010 ef85aeb31e68779c642d05ab3ac4cd78 95 SUPERFAMILY SSF143011 1 83 1.7E-23 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAA_00010 ef85aeb31e68779c642d05ab3ac4cd78 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 8.6E-14 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VAA_00010 ef85aeb31e68779c642d05ab3ac4cd78 95 Gene3D G3DSA:3.30.2310.20 1 94 5.3E-28 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VAA_02593 663bf7e4d0b8a2ae2eb9092d09255400 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 413 5.4E-58 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02593 663bf7e4d0b8a2ae2eb9092d09255400 448 Pfam PF01554 MatE 248 409 7.8E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02593 663bf7e4d0b8a2ae2eb9092d09255400 448 Pfam PF01554 MatE 25 183 6.5E-27 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02593 663bf7e4d0b8a2ae2eb9092d09255400 448 PIRSF PIRSF006603 3 446 6.2E-128 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VAA_02046 719fb1c10826c1997077735f5103ad88 364 SUPERFAMILY SSF51395 2 363 3.36E-127 T 13-10-2018 VAA_02046 719fb1c10826c1997077735f5103ad88 364 Gene3D G3DSA:3.20.20.70 2 364 1.1E-139 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VAA_02046 719fb1c10826c1997077735f5103ad88 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 7.7E-99 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VAA_01193 8c896c493ef7812f5d338c477e639e84 222 PIRSF PIRSF004525 14 222 9.8E-11 T 13-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VAA_01766 6f26cfaac3976797dd5e5f64d0ea51d1 212 Gene3D G3DSA:1.10.10.10 135 207 8.0E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VAA_01766 6f26cfaac3976797dd5e5f64d0ea51d1 212 Gene3D G3DSA:3.40.50.450 1 134 1.6E-54 T 13-10-2018 VAA_01766 6f26cfaac3976797dd5e5f64d0ea51d1 212 Pfam PF02481 DNA recombination-mediator protein A 5 121 2.6E-43 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VAA_01766 6f26cfaac3976797dd5e5f64d0ea51d1 212 SUPERFAMILY SSF102405 4 130 1.28E-17 T 13-10-2018 VAA_03488 e685340b3e4e9ef68183acf214196706 75 SUPERFAMILY SSF64307 5 71 4.19E-11 T 13-10-2018 IPR036868 TusA-like domain superfamily VAA_03488 e685340b3e4e9ef68183acf214196706 75 Pfam PF01206 Sulfurtransferase TusA 5 57 6.4E-11 T 13-10-2018 IPR001455 TusA-like domain VAA_03488 e685340b3e4e9ef68183acf214196706 75 Gene3D G3DSA:3.30.110.40 2 73 6.5E-8 T 13-10-2018 IPR036868 TusA-like domain superfamily VAA_00582 d78fd5dd0cc4e5dad365d576b9ae666a 184 Pfam PF04220 Der GTPase activator (YihI) 21 174 5.0E-45 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 VAA_00582 d78fd5dd0cc4e5dad365d576b9ae666a 184 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 177 16.445 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 VAA_02718 3284e33aa5f8a468b3bebbf1f6dd75ec 250 Pfam PF10986 Protein of unknown function (DUF2796) 160 246 6.1E-18 T 13-10-2018 IPR021253 Protein of unknown function DUF2796 VAA_02718 3284e33aa5f8a468b3bebbf1f6dd75ec 250 Pfam PF10986 Protein of unknown function (DUF2796) 48 161 4.2E-30 T 13-10-2018 IPR021253 Protein of unknown function DUF2796 VAA_02006 970f104652423c054ad324c3bea3dd80 118 Gene3D G3DSA:2.40.10.430 4 107 3.6E-5 T 13-10-2018 VAA_02006 970f104652423c054ad324c3bea3dd80 118 Pfam PF07238 PilZ domain 8 88 3.3E-6 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VAA_00389 4affacd98f5660e79d5e6b15edf4c324 121 Pfam PF15933 Antitoxin to bacterial toxin RNase LS or RnlA 15 112 5.9E-31 T 13-10-2018 IPR031834 Antitoxin RnlB/LsoB VAA_02894 d93177da3d78b4d5382b137258babc2f 393 Gene3D G3DSA:3.40.190.10 342 354 5.8E-12 T 13-10-2018 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 Pfam PF13416 Bacterial extracellular solute-binding protein 48 328 6.5E-40 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_02894 d93177da3d78b4d5382b137258babc2f 393 Gene3D G3DSA:3.40.190.10 135 280 6.6E-130 T 13-10-2018 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 Gene3D G3DSA:3.40.190.10 355 393 5.8E-12 T 13-10-2018 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 SUPERFAMILY SSF53850 24 392 1.09E-86 T 13-10-2018 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 354 373 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 67 85 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 33 51 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 230 249 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 127 146 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 168 187 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 148 167 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 PRINTS PR00181 Maltose binding protein signature 296 317 1.9E-62 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VAA_02894 d93177da3d78b4d5382b137258babc2f 393 Gene3D G3DSA:3.40.190.10 25 339 6.6E-130 T 13-10-2018 VAA_01580 7ae2153143994385a03277e2ea2c79f1 118 Gene3D G3DSA:1.20.120.160 10 118 9.8E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_01580 7ae2153143994385a03277e2ea2c79f1 118 SUPERFAMILY SSF47226 14 115 1.83E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VAA_02929 7815e2fd0dd13d2010c508059228cf86 433 Pfam PF10797 Protein of unknown function 6 431 2.3E-162 T 13-10-2018 IPR019733 Uncharacterised protein family YhfT VAA_03474 b4c35c2c6e82fa01d26344d50a43c434 113 Pfam PF11169 Protein of unknown function (DUF2956) 8 109 2.0E-41 T 13-10-2018 IPR021339 Protein of unknown function DUF2956 VAA_01646 51ee6c79169130c075c7d56e331745ff 336 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 23 327 1.5E-101 T 13-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VAA_01646 51ee6c79169130c075c7d56e331745ff 336 Pfam PF03741 Integral membrane protein TerC family 95 295 4.8E-53 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VAA_04324 44154430567dad8c96880f876bf75372 54 Pfam PF13005 zinc-finger binding domain of transposase IS66 1 35 7.2E-10 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 VAA_00685 56e2f8272fd8ed47de26ba80825e1e3e 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.37 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAA_00685 56e2f8272fd8ed47de26ba80825e1e3e 200 SMART SM01207 10 185 1.2E-85 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAA_00685 56e2f8272fd8ed47de26ba80825e1e3e 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 3.1E-76 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAA_00685 56e2f8272fd8ed47de26ba80825e1e3e 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 4.3E-52 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VAA_01811 901de441b2697d91b602208bc5cd78bc 170 Pfam PF00877 NlpC/P60 family 58 162 4.4E-31 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VAA_01811 901de441b2697d91b602208bc5cd78bc 170 SUPERFAMILY SSF54001 46 165 1.23E-39 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VAA_01811 901de441b2697d91b602208bc5cd78bc 170 Gene3D G3DSA:3.90.1720.10 44 167 1.8E-39 T 13-10-2018 VAA_03731 77a37652a071cf92a7caa4e60292cbf1 189 Pfam PF04972 BON domain 122 187 2.9E-18 T 13-10-2018 IPR007055 BON domain VAA_03731 77a37652a071cf92a7caa4e60292cbf1 189 Pfam PF04972 BON domain 45 112 7.7E-10 T 13-10-2018 IPR007055 BON domain VAA_03731 77a37652a071cf92a7caa4e60292cbf1 189 SMART SM00749 127 189 4.2E-4 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VAA_03731 77a37652a071cf92a7caa4e60292cbf1 189 SMART SM00749 50 113 20.0 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VAA_02246 822a9022848238ede3296890cf541819 45 Pfam PF08056 Tryptophan operon leader peptide 10 45 2.8E-10 T 13-10-2018 IPR012639 Tryptophan operon leader peptide VAA_04294 32a0be6c2cbbd061c4b19459a797401a 454 Gene3D G3DSA:3.30.70.270 276 454 1.0E-44 T 13-10-2018 VAA_04294 32a0be6c2cbbd061c4b19459a797401a 454 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 280 389 3.8E-23 T 13-10-2018 IPR000160 GGDEF domain VAA_04294 32a0be6c2cbbd061c4b19459a797401a 454 Pfam PF00990 Diguanylate cyclase, GGDEF domain 282 390 6.3E-22 T 13-10-2018 IPR000160 GGDEF domain VAA_04294 32a0be6c2cbbd061c4b19459a797401a 454 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 451 2.6E-6 T 13-10-2018 IPR000160 GGDEF domain VAA_04294 32a0be6c2cbbd061c4b19459a797401a 454 SMART SM00267 271 454 8.1E-28 T 13-10-2018 IPR000160 GGDEF domain VAA_04294 32a0be6c2cbbd061c4b19459a797401a 454 SUPERFAMILY SSF55073 287 453 3.45E-35 T 13-10-2018 IPR029787 Nucleotide cyclase VAA_02124 2af8d82228e170a12c21889614aa444c 315 SUPERFAMILY SSF53335 14 292 1.45E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VAA_02124 2af8d82228e170a12c21889614aa444c 315 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 30 315 8.7E-162 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VAA_02124 2af8d82228e170a12c21889614aa444c 315 Gene3D G3DSA:3.40.50.150 94 293 2.1E-43 T 13-10-2018 VAA_03190 819bed271829c4215d819ab28652542f 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 34 204 1.3E-6 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 VAA_03450 5a04aa985d81de260b09ea7c5cf778ea 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 1.2E-19 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VAA_00864 ac1b5e3b6b7057f05a04fb26375c6bb5 92 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.6E-6 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VAA_00864 ac1b5e3b6b7057f05a04fb26375c6bb5 92 SUPERFAMILY SSF50129 2 90 3.5E-26 T 13-10-2018 IPR011032 GroES-like superfamily VAA_00864 ac1b5e3b6b7057f05a04fb26375c6bb5 92 Gene3D G3DSA:3.90.180.10 17 91 9.3E-30 T 13-10-2018 VAA_01122 895628264da0805b96b048eb1ceb9615 440 SUPERFAMILY SSF56801 115 286 4.84E-8 T 13-10-2018 VAA_01122 895628264da0805b96b048eb1ceb9615 440 Gene3D G3DSA:3.40.50.12780 39 345 1.4E-55 T 13-10-2018 VAA_00894 3e3b4fc0a81219849ca442afd822e1ff 291 SUPERFAMILY SSF48452 183 265 3.04E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00894 3e3b4fc0a81219849ca442afd822e1ff 291 SMART SM00028 197 230 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00894 3e3b4fc0a81219849ca442afd822e1ff 291 SMART SM00028 231 264 0.056 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VAA_00894 3e3b4fc0a81219849ca442afd822e1ff 291 Gene3D G3DSA:1.25.40.10 107 276 1.3E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VAA_00007 29b47ffa6d20e2ca77af6553ed95b363 599 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 202 419 4.0E-30 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260 VAA_03155 800d8c191133d97297c919ce703fb55e 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 3.7E-26 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VAA_03155 800d8c191133d97297c919ce703fb55e 147 TIGRFAM TIGR02801 tolR: protein TolR 12 144 2.1E-38 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VAA_03155 800d8c191133d97297c919ce703fb55e 147 Gene3D G3DSA:3.30.420.270 63 137 9.8E-19 T 13-10-2018 VAA_03155 800d8c191133d97297c919ce703fb55e 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.84 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VAA_00064 81ee67d218e902d037f0fa8fea6bad14 84 Pfam PF11730 Protein of unknown function (DUF3297) 13 83 2.6E-37 T 13-10-2018 IPR021724 Protein of unknown function DUF3297 VAA_00918 1b5bec2005a6e4bd332bea43903b24cb 226 SUPERFAMILY SSF52833 11 220 3.3E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VAA_00918 1b5bec2005a6e4bd332bea43903b24cb 226 Gene3D G3DSA:3.40.30.10 4 219 1.8E-65 T 13-10-2018 VAA_00918 1b5bec2005a6e4bd332bea43903b24cb 226 Pfam PF01323 DSBA-like thioredoxin domain 13 215 2.5E-34 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VAA_02623 b58fa30545b505c758dec3f2008d95c7 84 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 6.7E-37 T 13-10-2018 IPR022072 Protein of unknown function DUF3624 VAA_04297 48b5ffd5101521f20b3f8c379534e7e8 783 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 101 782 9.7E-294 T 13-10-2018 IPR010706 Fatty acid cis-trans isomerase VAA_02893 d2441af5461e96ff03bd114d438dd6e8 821 Pfam PF06202 Amylo-alpha-1,6-glucosidase 297 662 2.7E-99 T 13-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 VAA_02893 d2441af5461e96ff03bd114d438dd6e8 821 SUPERFAMILY SSF48208 273 716 9.23E-61 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VAA_02893 d2441af5461e96ff03bd114d438dd6e8 821 Gene3D G3DSA:1.50.10.10 316 662 1.3E-39 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VAA_00853 cc3c9be6f4c8e9ddb9c2b8fe0a34dadd 415 Pfam PF00155 Aminotransferase class I and II 67 402 1.6E-25 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VAA_00853 cc3c9be6f4c8e9ddb9c2b8fe0a34dadd 415 Gene3D G3DSA:3.40.640.10 1 414 1.1E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VAA_00853 cc3c9be6f4c8e9ddb9c2b8fe0a34dadd 415 SUPERFAMILY SSF53383 13 408 6.81E-59 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VAA_01960 6ccc8bbb1b32b0c116ec3b027ab3c5a3 201 Pfam PF03942 DTW domain 7 186 3.0E-46 T 13-10-2018 IPR005636 DTW VAA_01960 6ccc8bbb1b32b0c116ec3b027ab3c5a3 201 SMART SM01144 3 194 2.7E-50 T 13-10-2018 IPR005636 DTW VAA_03492 939454f53dc7a800a4d99a4f081fc43b 190 Pfam PF03358 NADPH-dependent FMN reductase 4 134 1.2E-12 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VAA_03492 939454f53dc7a800a4d99a4f081fc43b 190 Gene3D G3DSA:3.40.50.360 1 189 1.0E-63 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_03492 939454f53dc7a800a4d99a4f081fc43b 190 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 186 1.3E-40 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VAA_03492 939454f53dc7a800a4d99a4f081fc43b 190 SUPERFAMILY SSF52218 3 187 2.23E-58 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VAA_03492 939454f53dc7a800a4d99a4f081fc43b 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VAA_00632 83cc3b18dd2149bf3dc4167155ae3237 115 Pfam PF05145 Transition state regulatory protein AbrB 2 105 2.3E-20 T 13-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 VAA_02683 c18beaba3832e93c2ba60dd0bec1fb5d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.564 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VAA_02683 c18beaba3832e93c2ba60dd0bec1fb5d 101 SUPERFAMILY SSF57716 2 101 1.64E-36 T 13-10-2018 VAA_02683 c18beaba3832e93c2ba60dd0bec1fb5d 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VAA_02683 c18beaba3832e93c2ba60dd0bec1fb5d 101 Gene3D G3DSA:4.10.830.10 41 101 2.7E-22 T 13-10-2018 VAA_02683 c18beaba3832e93c2ba60dd0bec1fb5d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.6E-24 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VAA_03603 e1698ec2953cf0dbb2659dc91c7c2781 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 136 7.0E-23 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03603 e1698ec2953cf0dbb2659dc91c7c2781 454 Pfam PF00209 Sodium:neurotransmitter symporter family 154 452 9.2E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03603 e1698ec2953cf0dbb2659dc91c7c2781 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.9E-9 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03603 e1698ec2953cf0dbb2659dc91c7c2781 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.9E-9 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03603 e1698ec2953cf0dbb2659dc91c7c2781 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.9E-9 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VAA_03603 e1698ec2953cf0dbb2659dc91c7c2781 454 SUPERFAMILY SSF161070 10 453 1.31E-114 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VAA_03186 5940cf1d12edad0d32ec0ad66087bcef 336 Gene3D G3DSA:2.40.128.140 28 334 5.6E-53 T 13-10-2018 IPR037107 Putative outer membrane protein superfamily VAA_03186 5940cf1d12edad0d32ec0ad66087bcef 336 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 36 333 4.5E-84 T 13-10-2018 IPR018707 Protein of unknown function DUF2219 VAA_01051 6e522e0fc7595b0b67fa18d011ada316 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 2.2E-24 T 13-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VAA_01051 6e522e0fc7595b0b67fa18d011ada316 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.6E-25 T 13-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VAA_02268 a3e9d5bbf239c70de598d19713317d45 175 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 4.8E-65 T 13-10-2018 IPR024409 Protein of unknown function DUF3833 VAA_00900 28d7cb58310ae8d495774df4046e0a4c 188 Pfam PF00924 Mechanosensitive ion channel 52 164 1.8E-9 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VAA_00900 28d7cb58310ae8d495774df4046e0a4c 188 SUPERFAMILY SSF50182 98 163 2.32E-7 T 13-10-2018 IPR010920 LSM domain superfamily VAA_03906 f9c51a431f4038ed00c19e2861c57909 306 Pfam PF13737 Transposase DDE domain 19 129 2.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_01743 d0ada71fbb02cf6749acb29000b84961 597 Pfam PF15864 Protein glycosylation ligase 185 210 2.0E-11 T 13-10-2018 IPR031726 Protein glycosylation ligase domain VAA_01743 d0ada71fbb02cf6749acb29000b84961 597 Pfam PF04932 O-Antigen ligase 232 377 6.9E-16 T 13-10-2018 IPR007016 O-antigen ligase-related VAA_01743 d0ada71fbb02cf6749acb29000b84961 597 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 399 587 1.9E-66 T 13-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VAA_03077 a6d53277cb9a9b06289e16d2e929523a 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 1.4E-8 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VAA_03077 a6d53277cb9a9b06289e16d2e929523a 191 Gene3D G3DSA:1.10.3420.10 4 92 3.9E-5 T 13-10-2018 IPR023292 NTP pyrophosphohydrolase-like domain superfamily VAA_03678 0967285926739ef3c16fd0f7f2c10468 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 5.4E-14 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VAA_03678 0967285926739ef3c16fd0f7f2c10468 183 Gene3D G3DSA:1.20.120.520 1 155 2.7E-16 T 13-10-2018 VAA_03752 bb16e79e3d24930c0a57fbc1b6fe4e5a 101 Gene3D G3DSA:1.20.120.330 1 101 4.0E-32 T 13-10-2018 VAA_03752 bb16e79e3d24930c0a57fbc1b6fe4e5a 101 Pfam PF08335 GlnD PII-uridylyltransferase 2 70 2.4E-8 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VAA_03752 bb16e79e3d24930c0a57fbc1b6fe4e5a 101 SUPERFAMILY SSF81593 2 101 1.33E-25 T 13-10-2018 VAA_02892 d934db19750cbc8dd8203305bd1d5a37 281 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 73 203 1.5E-41 T 13-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VAA_00709 967f97b47e8abed4d3dbb9145363d896 91 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 91 34.512 T 13-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VAA_00709 967f97b47e8abed4d3dbb9145363d896 91 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 12 89 7.7E-20 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAA_00709 967f97b47e8abed4d3dbb9145363d896 91 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 17 87 6.7E-18 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VAA_02305 6d40fec3a63d7d060cc4849e6876f646 436 Gene3D G3DSA:3.40.190.10 45 392 2.9E-160 T 13-10-2018 VAA_02305 6d40fec3a63d7d060cc4849e6876f646 436 SUPERFAMILY SSF53850 42 436 2.8E-59 T 13-10-2018 VAA_02305 6d40fec3a63d7d060cc4849e6876f646 436 Pfam PF01547 Bacterial extracellular solute-binding protein 81 307 7.1E-20 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VAA_02305 6d40fec3a63d7d060cc4849e6876f646 436 Gene3D G3DSA:3.40.190.10 160 417 2.9E-160 T 13-10-2018 VAA_02434 d4e014a3b706ecdb3bd41bf399054f65 564 Pfam PF06048 Domain of unknown function (DUF927) 20 278 1.3E-67 T 13-10-2018 IPR009270 Domain of unknown function DUF927 VAA_02978 8e33ad487467e358062e96dffcdd6c01 110 SUPERFAMILY SSF55248 17 109 1.1E-32 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAA_02978 8e33ad487467e358062e96dffcdd6c01 110 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 107 6.1E-30 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAA_02978 8e33ad487467e358062e96dffcdd6c01 110 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.21 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAA_02978 8e33ad487467e358062e96dffcdd6c01 110 Gene3D G3DSA:3.30.1360.20 15 110 1.6E-30 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VAA_00240 4b751d48927604f152849bfbf2f28eed 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 384 1.1E-12 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VAA_00583 757d9644d29d6972166fe6d2eb5382d9 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 1.6E-44 T 13-10-2018 IPR019617 Domain of unknown function DUF2489 VAA_02771 20392257518e147e9716c8b6ba9dd420 149 Gene3D G3DSA:3.40.50.10110 1 146 7.7E-45 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VAA_02771 20392257518e147e9716c8b6ba9dd420 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.8E-34 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VAA_02771 20392257518e147e9716c8b6ba9dd420 149 SUPERFAMILY SSF102400 1 145 6.8E-43 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VAA_1843 76769d6d19e9e5098fb89aeb6bdfd506 226 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 1.4E-54 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VAA_01144 f0c791130534d3e00c092fe01d7b11fb 118 Gene3D G3DSA:2.40.128.200 37 118 1.5E-15 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VAA_01144 f0c791130534d3e00c092fe01d7b11fb 118 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 41 112 2.1E-19 T 13-10-2018 IPR018660 C-type lysozyme inhibitor VAA_01144 f0c791130534d3e00c092fe01d7b11fb 118 SUPERFAMILY SSF141488 39 115 3.79E-15 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VAA_03709 c917087d7f0ca5b53a4ed673cabbbe02 151 Pfam PF05258 Protein of unknown function (DUF721) 12 89 5.1E-11 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VAA_02263 af961283ec2bdb548cb7a27df59b79a0 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.2E-18 T 13-10-2018 IPR025346 Protein of unknown function DUF4250 VAA_01136 afa05d66c6711d834dd178896fe2de78 255 Gene3D G3DSA:2.60.40.10 31 131 3.0E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold VAA_02149 3dc32b1d5efa67ba0b254ed5596b730b 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.4E-8 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VAA_02149 3dc32b1d5efa67ba0b254ed5596b730b 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 76 5.0E-36 T 13-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VAA_03140 600f1f9aada32a13dcf6090ad76feeb1 84 Pfam PF07383 Protein of unknown function (DUF1496) 29 80 2.8E-23 T 13-10-2018 IPR009971 Protein of unknown function DUF1496 VAA_02640 5a50160cb4a1088f335a214f179f3956 256 Gene3D G3DSA:3.40.190.10 33 249 3.0E-12 T 13-10-2018 VAA_02640 5a50160cb4a1088f335a214f179f3956 256 Gene3D G3DSA:3.40.190.10 117 208 3.0E-12 T 13-10-2018 VAA_02640 5a50160cb4a1088f335a214f179f3956 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 250 8.5E-10 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VAA_02640 5a50160cb4a1088f335a214f179f3956 256 SUPERFAMILY SSF53850 24 254 5.65E-25 T 13-10-2018 VAA_02227 b84e1c3cecd0b880be9822330071cbc3 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 4.4E-40 T 13-10-2018 IPR021813 Protein of unknown function DUF3392 VAA_00226 b1bb846dabb6f8f4fe8006ab18fde636 178 Pfam PF06042 Nucleotidyltransferase 20 175 5.4E-57 T 13-10-2018 IPR009267 Putative nucleotidyltransferase VAA_00182 57a15face12332ce06cf5cfa2b5cf294 210 Pfam PF01810 LysE type translocator 15 201 3.6E-40 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VAA_03202 5c37d8c60d35957a107be99262b62480 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 2.8E-46 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 VAA_03174 695eb1a73a93bea2ee79a722ad298d02 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 250 1.6E-45 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAA_1481 6b96cbfb78420a520ca17cdd64fa8342 258 Pfam PF01925 Sulfite exporter TauE/SafE 13 248 9.3E-27 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAA_03969 f28f78eb7425b08bf29c27cb19e7e883 306 Pfam PF13737 Transposase DDE domain 19 129 7.3E-45 T 13-10-2018 IPR025668 Transposase DDE domain VAA_01813 cb51ec2cd6fcc48535a179b2bf5c2815 263 Pfam PF04116 Fatty acid hydroxylase superfamily 89 225 8.6E-26 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VAA_03493 36308c4f04924b4278ee7988061fb78b 145 Pfam PF09842 Predicted membrane protein (DUF2069) 15 117 8.3E-35 T 13-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VAA_01530 17dc3c9322e12001ac2df6afac0cadcc 66 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 4.3E-22 T 13-10-2018 IPR021677 Protein of unknown function DUF2986 VAA_01402 5cb2dcdfbf91890708c7528d6209aba0 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 1.5E-60 T 13-10-2018 IPR021367 Protein of unknown function DUF2982 VAA_01364 99a966e60b8061cd381ddd7fef9364fd 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 4.0E-174 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAA_01364 99a966e60b8061cd381ddd7fef9364fd 526 PIRSF PIRSF006446 354 521 1.1E-31 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAA_01364 99a966e60b8061cd381ddd7fef9364fd 526 PIRSF PIRSF006446 1 326 1.5E-114 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VAA_01973 030ad66a423e2c290e4ccb94051e6dba 138 Pfam PF01914 MarC family integral membrane protein 3 82 4.8E-21 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VAA_03437 767fe4566d90a0695087c4e24ed34903 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 1.0E-72 T 13-10-2018 IPR007411 Elongation factor P hydroxylase VAA_01679 388fa75f29765709e4ffab5378e10e93 253 Pfam PF06738 Putative threonine/serine exporter 10 247 1.6E-68 T 13-10-2018 IPR010619 Putative threonine/serine exporter VAA_02569 f5a6184b4054a9d30c6b25d9b14a802e 181 Pfam PF04186 FxsA cytoplasmic membrane protein 21 128 1.5E-34 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VAA_02715 09854305318ab11a8a9470ae5ebdbd4e 166 Pfam PF11736 Protein of unknown function (DUF3299) 31 161 5.5E-44 T 13-10-2018 IPR021727 Protein of unknown function DUF3299 VAA_02715 09854305318ab11a8a9470ae5ebdbd4e 166 Gene3D G3DSA:2.40.50.870 24 166 4.9E-46 T 13-10-2018 VAA_02833 4698c1a5fc536baafcee6f4c1bde3561 134 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 1 122 9.8E-43 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAA_02833 4698c1a5fc536baafcee6f4c1bde3561 134 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 1 123 7.4E-43 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VAA_01310 2706c9993af6ab5c35ccb20f8ab79260 134 SUPERFAMILY SSF54403 51 122 4.62E-14 T 13-10-2018 VAA_01310 2706c9993af6ab5c35ccb20f8ab79260 134 Pfam PF00031 Cystatin domain 61 108 7.8E-7 T 13-10-2018 IPR000010 Cystatin domain GO:0004869 VAA_01310 2706c9993af6ab5c35ccb20f8ab79260 134 Gene3D G3DSA:3.10.450.10 49 125 8.7E-8 T 13-10-2018 VAA_03052 5e231a823b0c881f35f64cb81783080e 223 PIRSF PIRSF028063 1 221 1.7E-133 T 13-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VAA_03052 5e231a823b0c881f35f64cb81783080e 223 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.6E-37 T 13-10-2018 IPR024402 Domain of unknown function DUF2726 VAA_03867 bb05e33bd1f34052f5976fab05be155f 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 1.5E-12 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VAA_03500 789e221e625aace157d5466c7c36a03c 127 PIRSF PIRSF005610 1 121 7.0E-18 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VAA_03500 789e221e625aace157d5466c7c36a03c 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 122 1.6E-38 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VAA_00475 29eddc0cffc8ff7dd82ef50e6241e4fa 145 Pfam PF10008 Uncharacterized protein conserved in bacteria (DUF2251) 35 124 1.2E-31 T 13-10-2018 IPR014449 Uncharacterised conserved protein UCP007050, HI0931 VAA_00485 d37340e318548f49c3105a740dc187c1 180 Gene3D G3DSA:3.40.390.50 22 135 3.8E-9 T 13-10-2018 VAA_00485 d37340e318548f49c3105a740dc187c1 180 Pfam PF06114 IrrE N-terminal-like domain 46 171 3.1E-28 T 13-10-2018 IPR010359 IrrE N-terminal-like domain VAA_02210 9611cf11fc3ad22c3b1a5a8d59f90104 419 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 409 3.2E-42 T 13-10-2018 IPR010352 Protein of unknown function DUF945 VAA_00237 bfdb2db685406963faf6c458d788a103 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.2E-33 T 13-10-2018 IPR021700 Protein of unknown function DUF3283 VAA_00237 bfdb2db685406963faf6c458d788a103 69 SUPERFAMILY SSF46575 1 63 7.19E-5 T 13-10-2018 VAA_00369 f6aa0b712d7303c33ae20969b63b2f52 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 3.5E-50 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAA_02723 9da0f99d75c39e04347f9477e0d676d4 1265 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 928 1264 1.3E-61 T 13-10-2018 IPR007452 Translocation and assembly module TamB VAA_03962 21ad5f2d14b98daadbd9fdf94a810f51 52 Pfam PF05717 IS66 Orf2 like protein 9 51 4.0E-10 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_01592 5eefc8a2e2a8d971ab75c1bde9639351 139 Pfam PF04143 Sulphur transport 2 125 9.1E-10 T 13-10-2018 IPR007272 Sulphur transport domain VAA_02566 c126388f1d6fcc76e6de695ee369016f 211 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 210 4.7E-97 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VAA_02216 631336ed59bef6cf4a0490492b78f72f 301 Pfam PF03956 Lysine exporter LysO 112 297 2.3E-52 T 13-10-2018 IPR005642 Lysine exporter LysO VAA_02216 631336ed59bef6cf4a0490492b78f72f 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 6.0E-79 T 13-10-2018 IPR005642 Lysine exporter LysO VAA_03012 5b1f9cfe7c2a5afacf4d6177668ed691 71 Pfam PF13333 Integrase core domain 14 69 2.3E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VAA_03012 5b1f9cfe7c2a5afacf4d6177668ed691 71 SUPERFAMILY SSF53098 1 70 4.36E-11 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VAA_00405 ff7abfd407aec34aa7d2c352131fb659 381 Pfam PF02690 Na+/Pi-cotransporter 29 149 2.7E-19 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VAA_00405 ff7abfd407aec34aa7d2c352131fb659 381 Pfam PF02690 Na+/Pi-cotransporter 217 322 7.5E-19 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VAA_00559 3905207bcacde492ffc2c8f9decd53f9 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 318 2.5E-38 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAA_01219 7a58278776c98d95bb355154dfc858ae 147 Gene3D G3DSA:3.10.450.430 1 147 2.6E-63 T 13-10-2018 VAA_01219 7a58278776c98d95bb355154dfc858ae 147 Pfam PF10980 Protein of unknown function (DUF2787) 15 145 7.6E-52 T 13-10-2018 IPR021248 Protein of unknown function DUF2787 VAA_00455 9ff9cc77594592b1eb69cab0c671bce5 135 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 4.7E-19 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VAA_01116 be6c3d1fd9de6525b5359aaf82316a40 438 Pfam PF04932 O-Antigen ligase 217 356 2.1E-17 T 13-10-2018 IPR007016 O-antigen ligase-related VAA_01077 6755d8f82bf906fde308231461fbc011 265 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 220 7.5E-47 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VAA_01460 c7537d008eaed00071c97e080657202b 211 Pfam PF10816 Domain of unknown function (DUF2760) 88 210 6.7E-54 T 13-10-2018 IPR021212 Domain of unknown function DUF2760 VAA_01567 34df42aff4e7c2256341b7b81eebacd0 385 SUPERFAMILY SSF56796 5 383 2.22E-96 T 13-10-2018 VAA_01567 34df42aff4e7c2256341b7b81eebacd0 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 357 4.2E-78 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VAA_01567 34df42aff4e7c2256341b7b81eebacd0 385 Gene3D G3DSA:1.20.1090.10 184 384 4.6E-33 T 13-10-2018 VAA_01567 34df42aff4e7c2256341b7b81eebacd0 385 Gene3D G3DSA:3.40.50.1970 3 183 5.8E-49 T 13-10-2018 VAA_03036 f4cc3073f9b0b7090e05125d30e910c4 451 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 38 442 1.4E-115 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA_03195 55a2a1ecdc26dd9dc5ffebe8b5a9ffcd 512 Pfam PF04293 SpoVR like protein 21 451 1.6E-176 T 13-10-2018 IPR007390 Sporulation stage V, protein R VAA_01204 8f63c79a7c2ffcd5afb7f33a7595b320 121 Pfam PF04355 SmpA / OmlA family 37 104 2.3E-23 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VAA_01204 8f63c79a7c2ffcd5afb7f33a7595b320 121 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 9 114 32.169 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE VAA_01204 8f63c79a7c2ffcd5afb7f33a7595b320 121 Gene3D G3DSA:3.30.1450.10 36 117 1.4E-23 T 13-10-2018 IPR037873 BamE-like VAA_02228 1541c3a6ea804888ad417b9a756ac367 240 Pfam PF02698 DUF218 domain 63 200 3.4E-19 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VAA_01993 111f8c68cc2ed68c4b544e649d5b0ef5 817 Pfam PF02687 FtsX-like permease family 715 809 8.1E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VAA_01799 fd34808b03692899f2017b5976d23539 257 PIRSF PIRSF028069 1 255 3.0E-95 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VAA_01799 fd34808b03692899f2017b5976d23539 257 Pfam PF11932 Protein of unknown function (DUF3450) 10 248 3.1E-80 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VAA_02303 8e63f6b12397e9579c19c2459e5fc742 282 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 82 233 1.2E-25 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VAA_00445 904670fef0b8f7ee576e4b059692c9d0 110 Pfam PF01914 MarC family integral membrane protein 14 107 5.5E-26 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VAA_02824 2c7cc7b44bb7aa7b83a08d9013fd17d5 765 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 388 715 1.6E-148 T 13-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 VAA_00874 4d941d526ca6d3367d97d7e88cace3b6 804 SUPERFAMILY SSF56349 587 679 5.0E-5 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VAA_03473 b7bdd3790efee6ffbf2ce5e55e821476 155 Pfam PF11143 Protein of unknown function (DUF2919) 4 148 1.7E-54 T 13-10-2018 IPR021318 Protein of unknown function DUF2919 VAA_01110 b6ce0afc10b26692afbff83f11853e69 396 Pfam PF10082 Putative beta-barrel porin 2 39 390 1.0E-27 T 13-10-2018 IPR018759 Putative beta-barrel porin 2 VAA_02364 6d9b1e07652388ca7c8239f91f70ef1d 241 Pfam PF11859 Protein of unknown function (DUF3379) 1 236 3.2E-85 T 13-10-2018 IPR021806 Protein of unknown function DUF3379 VAA_02801 6409be19f42b6c1aad7fa3d97ddb55ea 342 Pfam PF04393 Protein of unknown function (DUF535) 53 327 1.0E-83 T 13-10-2018 IPR007488 Protein of unknown function DUF535 VAA_00960 01073fd5f46782e911adbac9e65350d6 146 SUPERFAMILY SSF55785 9 124 9.9E-9 T 13-10-2018 IPR035965 PAS domain superfamily VAA_00960 01073fd5f46782e911adbac9e65350d6 146 Gene3D G3DSA:3.30.450.20 5 139 1.3E-29 T 13-10-2018 VAA_01081 bfae91984537d23ca2bf37baf56d7a63 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 6.1E-39 T 13-10-2018 VAA_01081 bfae91984537d23ca2bf37baf56d7a63 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.309 T 13-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VAA_03555 3826306358d38ee24215c78c2d5283c5 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 1.3E-46 T 13-10-2018 IPR009698 Protein of unknown function DUF1282 VAA_04292 6d7b618c4ec08516fb4ca59050b59c80 104 Pfam PF10115 Transcriptional activator HlyU 12 103 6.0E-38 T 13-10-2018 IPR018772 Transcription activator HlyU VAA_00571 f308630f38d23dd1f265d3a5332bd3c6 203 Pfam PF02036 SCP-2 sterol transfer family 17 113 1.6E-20 T 13-10-2018 IPR003033 SCP2 sterol-binding domain VAA_00571 f308630f38d23dd1f265d3a5332bd3c6 203 SUPERFAMILY SSF55718 17 119 1.53E-7 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VAA_01259 437ee4772966419264b92773c8ee3713 192 SUPERFAMILY SSF51645 21 186 4.58E-21 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_01259 437ee4772966419264b92773c8ee3713 192 Gene3D G3DSA:2.170.170.11 18 134 7.7E-28 T 13-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VAA_02270 c73ea5cb3f2af55d90c349c7efe7b826 165 Pfam PF11086 Protein of unknown function (DUF2878) 6 149 2.0E-31 T 13-10-2018 IPR021306 Protein of unknown function DUF2878 VAA_00497 003fc561a9ef3dd8532689605552da01 242 Pfam PF01184 GPR1/FUN34/yaaH family 41 220 8.0E-36 T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VAA_00497 003fc561a9ef3dd8532689605552da01 242 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 47 56 - T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VAA_01321 746be4efe8725226d0048503f7d1b782 589 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 27 576 2.3E-102 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VAA_01321 746be4efe8725226d0048503f7d1b782 589 Pfam PF02652 L-lactate permease 30 571 4.0E-104 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VAA_03619 a719a392ddd39d6b31f8be4737d15da3 191 Pfam PF03923 Uncharacterized lipoprotein 30 188 2.3E-52 T 13-10-2018 IPR005619 Uncharacterised protein family, YajG VAA_00041 650c352e5b4cf911c54e8587cf55fc85 203 Pfam PF06042 Nucleotidyltransferase 45 201 1.0E-58 T 13-10-2018 IPR009267 Putative nucleotidyltransferase VAA_03423 f869020b1ba7e4520556a26523c9c355 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.2E-18 T 13-10-2018 IPR021249 Protein of unknown function DUF2788 VAA_00956 1001806464df7419ef3040fb79f5dd42 400 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 184 396 6.0E-125 T 13-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_00956 1001806464df7419ef3040fb79f5dd42 400 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 160 6.0E-92 T 13-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_00956 1001806464df7419ef3040fb79f5dd42 400 Pfam PF17327 Acyl homoserine lactone synthase 18 389 7.3E-164 T 13-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VAA_04293 7af3edd8245a0155130dab8fddb9261f 122 Pfam PF10719 Late competence development protein ComFB 8 84 8.6E-12 T 13-10-2018 IPR019657 Late competence development protein ComFB VAA_02503 29d0861d48ff300ee1616da44e0b21de 250 Gene3D G3DSA:3.90.550.10 5 230 1.8E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02503 29d0861d48ff300ee1616da44e0b21de 250 Pfam PF02709 N-terminal domain of galactosyltransferase 169 222 3.2E-5 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 VAA_02503 29d0861d48ff300ee1616da44e0b21de 250 SUPERFAMILY SSF53448 41 238 1.19E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VAA_02902 352ebb7f3e45f77d5cf16f1f21b9bf63 306 Pfam PF04018 Domain of unknown function (DUF368) 13 257 1.7E-96 T 13-10-2018 IPR007163 Protein of unknown function DUF368 VAA_02436 90ece1bbeac6af84fe1f90ef97f3f898 312 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 13 278 3.6E-37 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system VAA_01545 8c3750329719175122132ff09cd8bb10 383 Pfam PF13729 F plasmid transfer operon, TraF, protein 48 300 2.6E-72 T 13-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VAA_02708 b9a3cb12e0f1f18fc91d0109a3d1e97a 195 Pfam PF09335 SNARE associated Golgi protein 44 151 2.1E-12 T 13-10-2018 IPR032816 SNARE associated Golgi protein VAA_04281 a64a72ab4929d5464b2f39749dcd892c 71 Pfam PF05717 IS66 Orf2 like protein 9 71 7.4E-23 T 13-10-2018 IPR008878 Transposase IS66, Orf2 VAA_00992 76d55d6a40fa59b4ff3bb0cd6fa7119a 329 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 192 321 2.4E-10 T 13-10-2018 IPR019238 Transcriptional regulator, AbiEi 2 antitoxin, Type IV TA system VAA_03700 c39ea356a8b3fd400cbc5727889b91d3 206 Pfam PF03458 UPF0126 domain 8 81 3.2E-22 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VAA_03700 c39ea356a8b3fd400cbc5727889b91d3 206 Pfam PF03458 UPF0126 domain 95 165 3.6E-20 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VAA_01796 75c2b9f7c35ed7d1928379b54198f0fe 277 Pfam PF02517 CAAX protease self-immunity 175 263 3.6E-13 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 VAA_04076 feb0230f39eb4c92241d4117a3308039 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 5.9E-14 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VAA_03298 df6b64e6b43a18fa17369a5ebbe994a7 202 Pfam PF12261 Thermostable hemolysin 18 188 5.9E-61 T 13-10-2018 IPR022050 Thermostable hemolysin VAA_03698 2138158960362c4f6944b83fc0de9053 317 Pfam PF03186 CobD/Cbib protein 19 283 3.7E-32 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VAA_01004 305ea569f6b7d3a3fedecdc343af016d 232 Pfam PF09335 SNARE associated Golgi protein 53 177 1.6E-13 T 13-10-2018 IPR032816 SNARE associated Golgi protein VAA_00289 5bb2f8b011b92a4b6a88735715c38730 480 Pfam PF06054 Competence protein CoiA-like family 31 72 5.9E-6 T 13-10-2018 IPR010330 Competence-induced protein CoiA-like VAA_03870 9a8e8c622df81216cf3f86f268faeec8 37 Pfam PF11665 Protein of unknown function (DUF3265) 10 37 1.7E-14 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VAA_00193 9dd5223a6e2f385e8dd752dc62fecec7 77 Pfam PF04927 Seed maturation protein 34 74 6.0E-6 T 13-10-2018 IPR007011 Late embryogenesis abundant protein, SMP subgroup VAA_01691 51520735d4613a8843b90d901128e28f 133 Pfam PF09834 Predicted membrane protein (DUF2061) 4 55 2.2E-21 T 13-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VAA_01691 51520735d4613a8843b90d901128e28f 133 Pfam PF09834 Predicted membrane protein (DUF2061) 69 119 3.5E-20 T 13-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VAA_03239 1f1447013778b50c7deb338ee71c508c 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 272 7.4E-26 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VAA_01838 0dff0887f2b119924735c6bc91988bc8 220 Pfam PF11205 Protein of unknown function (DUF2987) 23 166 1.3E-53 T 13-10-2018 IPR021370 Protein of unknown function DUF2987 VAA_02930 cedbae51591f1aa42712bb67cd9475ee 119 Pfam PF10941 Protein of unknown function DUF2620 2 115 9.4E-45 T 13-10-2018 IPR021238 Protein of unknown function DUF2620 VAA_00223 ac37fc3a3d4a003123fed0dfc6c05782 68 Pfam PF06945 Protein of unknown function (DUF1289) 14 60 8.6E-16 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 VAA_03701 2149dd71de1ba231654dc2be9aa2771c 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 2.6E-41 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VAA_00261 070ea7a9e7d0a7a6e505bd40a72fbc4b 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 7.7E-49 T 13-10-2018 IPR007433 Protein of unknown function DUF481 VAA_00281 9b6b3e896e33ea49ed9bf676e64663c4 128 SUPERFAMILY SSF46785 53 106 3.57E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VAA_01365 d413b4814d824be7d75a618cc65d585e 219 Pfam PF07681 DoxX 44 131 1.5E-15 T 13-10-2018 IPR032808 DoxX family VAA_00298 c53b57a6b964a885a67a43e788a79489 295 Pfam PF13503 Domain of unknown function (DUF4123) 27 136 3.8E-17 T 13-10-2018 IPR025391 Domain of unknown function DUF4123 VAA_02141 e17702ed781694e0ebf4fe3fd7784a7b 130 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 3.1E-36 T 13-10-2018 IPR021284 Protein of unknown function DUF2750