CLI14_00005 SM01228 CLI14_00005 CLI14_00020 SM00470 ParB-like nuclease domain CLI14_00060 SM00382 ATPases associated with a variety of cellular activities CLI14_00180 SM00876 Biotin and Thiamin Synthesis associated domain CLI14_00210 SM00344 helix_turn_helix ASNC type CLI14_00265 SM00382 ATPases associated with a variety of cellular activities CLI14_00280 SM01007 Class II Aldolase and Adducin N-terminal domain CLI14_00295 SM00342 helix_turn_helix, arabinose operon control protein CLI14_00350 SM01004 Delta-aminolevulinic acid dehydratase CLI14_00355 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLI14_00355 SM00474 3'-5' exonuclease CLI14_00355 SM00475 5'-3' exonuclease CLI14_00355 SM00482 DNA polymerase A domain CLI14_00385 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_00455 SM00382 ATPases associated with a variety of cellular activities CLI14_00485 SM00448 cheY-homologous receiver domain CLI14_00500 SM00530 Helix-turn-helix XRE-family like proteins CLI14_00510 SM00487 DEAD-like helicases superfamily CLI14_00645 SM00342 helix_turn_helix, arabinose operon control protein CLI14_00655 SM00341 Helicase and RNase D C-terminal CLI14_00655 SM00487 DEAD-like helicases superfamily CLI14_00655 SM00490 helicase superfamily c-terminal domain CLI14_00655 SM00956 CLI14_00655 CLI14_00685 SM00382 ATPases associated with a variety of cellular activities CLI14_00695 SM00382 ATPases associated with a variety of cellular activities CLI14_00725 SM00636 CLI14_00725 CLI14_00765 SM00530 Helix-turn-helix XRE-family like proteins CLI14_00795 SM00530 Helix-turn-helix XRE-family like proteins CLI14_00865 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CLI14_00865 SM01232 CLI14_00865 CLI14_00975 SM00382 ATPases associated with a variety of cellular activities CLI14_01125 SM00226 Low molecular weight phosphatase family CLI14_01175 SM00984 UDP binding domain CLI14_01185 SM00849 Metallo-beta-lactamase superfamily CLI14_01185 SM01027 Beta-Casp domain CLI14_01190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_01190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_01220 SM00411 bacterial (prokaryotic) histone like domain CLI14_01230 SM01209 CLI14_01230 CLI14_01230 SM01210 CLI14_01230 CLI14_01235 SM00798 AICARFT/IMPCHase bienzyme CLI14_01235 SM00851 MGS-like domain CLI14_01240 SM00422 helix_turn_helix, mercury resistance CLI14_01265 SM00878 Biotin carboxylase C-terminal domain CLI14_01285 SM00479 CLI14_01285 CLI14_01300 SM00387 Histidine kinase-like ATPases CLI14_01300 SM00388 His Kinase A (phosphoacceptor) domain CLI14_01300 SM00448 cheY-homologous receiver domain CLI14_01315 SM01091 Transporter associated domain CLI14_01320 SM00421 helix_turn_helix, Lux Regulon CLI14_01320 SM00448 cheY-homologous receiver domain CLI14_01385 SM00357 Cold shock protein domain CLI14_01395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_01395 SM00387 Histidine kinase-like ATPases CLI14_01395 SM00388 His Kinase A (phosphoacceptor) domain CLI14_01400 SM00448 cheY-homologous receiver domain CLI14_01400 SM00862 Transcriptional regulatory protein, C terminal CLI14_01450 SM00919 Malic enzyme, NAD binding domain CLI14_01450 SM01274 CLI14_01450 CLI14_01460 SM00487 DEAD-like helicases superfamily CLI14_01460 SM00490 helicase superfamily c-terminal domain CLI14_01465 SM00354 helix_turn _helix lactose operon repressor CLI14_01480 SM00382 ATPases associated with a variety of cellular activities CLI14_01480 SM01086 C-terminal, D2-small domain, of ClpB protein CLI14_01525 SM00883 Chaperonin 10 Kd subunit CLI14_01550 SM00841 Elongation factor P, C-terminal CLI14_01550 SM01185 CLI14_01550 CLI14_01580 SM00450 Rhodanese Homology Domain CLI14_01595 SM00971 Serine acetyltransferase, N-terminal CLI14_01615 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLI14_01680 SM00965 Secretin and TonB N terminus short domain CLI14_01770 SM01150 CLI14_01770 CLI14_01775 SM00100 Cyclic nucleotide-monophosphate binding domain CLI14_01775 SM00419 helix_turn_helix, cAMP Regulatory protein CLI14_01800 SM00382 ATPases associated with a variety of cellular activities CLI14_01830 SM00788 Adenylosuccinate synthetase CLI14_01840 SM00671 Sel1-like repeats. CLI14_01845 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_01845 SM00357 Cold shock protein domain CLI14_01845 SM00955 CLI14_01845 CLI14_01850 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLI14_01855 SM01403 CLI14_01855 CLI14_01875 SM01382 CLI14_01875 CLI14_01875 SM01383 CLI14_01875 CLI14_01890 SM00322 K homology RNA-binding domain CLI14_01910 SM01374 CLI14_01910 CLI14_01915 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLI14_01980 SM00363 S4 RNA-binding domain CLI14_01980 SM01390 CLI14_01980 CLI14_01985 SM00662 RNA polymerases D CLI14_02010 SM00487 DEAD-like helicases superfamily CLI14_02010 SM00490 helicase superfamily c-terminal domain CLI14_02015 SM00563 Phosphate acyltransferases CLI14_02090 SM00382 ATPases associated with a variety of cellular activities CLI14_02165 SM00382 ATPases associated with a variety of cellular activities CLI14_02180 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_02180 SM00924 MgtE intracellular N domain CLI14_02210 SM00382 ATPases associated with a variety of cellular activities CLI14_02230 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_02240 SM00382 ATPases associated with a variety of cellular activities CLI14_02275 SM00563 Phosphate acyltransferases CLI14_02280 SM00387 Histidine kinase-like ATPases CLI14_02285 SM00989 CLI14_02285 CLI14_02310 SM00670 Large family of predicted nucleotide-binding domains CLI14_02320 SM00487 DEAD-like helicases superfamily CLI14_02320 SM00490 helicase superfamily c-terminal domain CLI14_02400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_02455 SM01329 CLI14_02455 CLI14_02460 SM00917 LeuA allosteric (dimerisation) domain CLI14_02465 SM00014 Acid phosphatase homologues CLI14_02595 SM00358 Double-stranded RNA binding motif CLI14_02595 SM00535 Ribonuclease III family CLI14_02620 SM00073 Histidine Phosphotransfer domain CLI14_02620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_02620 SM00387 Histidine kinase-like ATPases CLI14_02620 SM00388 His Kinase A (phosphoacceptor) domain CLI14_02620 SM00448 cheY-homologous receiver domain CLI14_02630 SM00954 Region found in RelA / SpoT proteins CLI14_02645 SM01192 CLI14_02645 CLI14_02645 SM01193 CLI14_02645 CLI14_02655 SM00382 ATPases associated with a variety of cellular activities CLI14_02665 SM00287 Bacterial SH3 domain homologues CLI14_02680 SM00880 CLI14_02680 CLI14_02680 SM01118 CLI14_02680 CLI14_02690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_02730 SM00387 Histidine kinase-like ATPases CLI14_02730 SM00433 TopoisomeraseII CLI14_02735 SM00434 DNA Topoisomerase IV CLI14_02740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLI14_02745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLI14_02800 SM00749 bacterial OsmY and nodulation domain CLI14_02885 SM00842 Cell division protein FtsA CLI14_02890 SM00864 Tubulin/FtsZ family, GTPase domain CLI14_02890 SM00865 Tubulin/FtsZ family, C-terminal domain CLI14_02905 SM00957 SecA DEAD-like domain CLI14_02905 SM00958 SecA preprotein cross-linking domain CLI14_02920 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CLI14_02925 SM00851 MGS-like domain CLI14_02925 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLI14_02990 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_02995 SM00073 Histidine Phosphotransfer domain CLI14_02995 SM00091 PAS domain CLI14_02995 SM00387 Histidine kinase-like ATPases CLI14_02995 SM00388 His Kinase A (phosphoacceptor) domain CLI14_02995 SM00448 cheY-homologous receiver domain CLI14_03005 SM00448 cheY-homologous receiver domain CLI14_03005 SM00862 Transcriptional regulatory protein, C terminal CLI14_03040 SM00518 AP endonuclease family 2 CLI14_03045 SM00986 Uracil DNA glycosylase superfamily CLI14_03045 SM00987 UreE urease accessory protein, C-terminal domain CLI14_03080 SM01133 CLI14_03080 CLI14_03085 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CLI14_03115 SM00382 ATPases associated with a variety of cellular activities CLI14_03120 SM00838 Elongation factor G C-terminus CLI14_03120 SM00889 Elongation factor G, domain IV CLI14_03165 SM00354 helix_turn _helix lactose operon repressor CLI14_03245 SM00925 MltA specific insert domain CLI14_03280 SM00464 Found in ATP-dependent protease La (LON) CLI14_03330 SM00900 CLI14_03330 CLI14_03420 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CLI14_03475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_03520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLI14_03530 SM00935 Outer membrane protein (OmpH-like) CLI14_03560 SM00481 DNA polymerase alpha chain like domain CLI14_03570 SM00977 TilS substrate C-terminal domain CLI14_03580 SM00938 Nitrogen regulatory protein P-II CLI14_03595 SM00257 Lysin motif CLI14_03600 SM00849 Metallo-beta-lactamase superfamily CLI14_03615 SM00479 CLI14_03615 CLI14_03655 SM00363 S4 RNA-binding domain CLI14_03670 SM01081 Putative carbohydrate binding domain CLI14_03730 SM00858 CLI14_03730 CLI14_03735 SM00260 Two component signalling adaptor domain CLI14_03735 SM00448 cheY-homologous receiver domain CLI14_03740 SM00138 Methyltransferase, chemotaxis proteins CLI14_03785 SM00047 Lysozyme subfamily 2 CLI14_03895 SM01400 CLI14_03895 CLI14_03915 SM00937 CLI14_03915 CLI14_03990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_03990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_04005 SM01130 CLI14_04005 CLI14_04100 SM00091 PAS domain CLI14_04100 SM00387 Histidine kinase-like ATPases CLI14_04100 SM00388 His Kinase A (phosphoacceptor) domain CLI14_04105 SM00382 ATPases associated with a variety of cellular activities CLI14_04105 SM00448 cheY-homologous receiver domain CLI14_04130 SM00382 ATPases associated with a variety of cellular activities CLI14_04185 SM00463 Small MutS-related domain CLI14_04225 SM00825 Beta-ketoacyl synthase CLI14_04235 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLI14_04325 SM00861 Transketolase, pyrimidine binding domain CLI14_04340 SM00881 CoA binding domain CLI14_04350 SM00382 ATPases associated with a variety of cellular activities CLI14_04360 SM00342 helix_turn_helix, arabinose operon control protein CLI14_04365 SM00899 CLI14_04365 CLI14_04385 SM00836 DALR anticodon binding domain CLI14_04385 SM01016 Arginyl tRNA synthetase N terminal dom CLI14_04400 SM00855 Phosphoglycerate mutase family CLI14_04410 SM00382 ATPases associated with a variety of cellular activities CLI14_04410 SM00962 SRP54-type protein, GTPase domain CLI14_04425 SM00448 cheY-homologous receiver domain CLI14_04435 SM00073 Histidine Phosphotransfer domain CLI14_04435 SM00260 Two component signalling adaptor domain CLI14_04435 SM00387 Histidine kinase-like ATPases CLI14_04435 SM01231 CLI14_04435 CLI14_04440 SM00448 cheY-homologous receiver domain CLI14_04450 SM00260 Two component signalling adaptor domain CLI14_04455 SM00260 Two component signalling adaptor domain CLI14_04465 SM00382 ATPases associated with a variety of cellular activities CLI14_04535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLI14_04535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLI14_04535 SM00493 CLI14_04535 CLI14_04590 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLI14_04610 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_04615 SM00363 S4 RNA-binding domain CLI14_04645 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLI14_04650 SM00822 CLI14_04650 CLI14_04660 SM00825 Beta-ketoacyl synthase CLI14_04730 SM00260 Two component signalling adaptor domain CLI14_04730 SM00448 cheY-homologous receiver domain CLI14_04750 SM01144 CLI14_04750 CLI14_04755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_04760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_04795 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CLI14_04820 SM00563 Phosphate acyltransferases CLI14_04830 SM00978 CLI14_04830 CLI14_04840 SM00344 helix_turn_helix ASNC type CLI14_04865 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_04865 SM00267 diguanylate cyclase CLI14_04895 SM01236 CLI14_04895 CLI14_04910 SM00448 cheY-homologous receiver domain CLI14_04910 SM00862 Transcriptional regulatory protein, C terminal CLI14_04915 SM00387 Histidine kinase-like ATPases CLI14_04915 SM00388 His Kinase A (phosphoacceptor) domain CLI14_04925 SM00344 helix_turn_helix ASNC type CLI14_04940 SM00448 cheY-homologous receiver domain CLI14_04940 SM00862 Transcriptional regulatory protein, C terminal CLI14_04945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_04945 SM00387 Histidine kinase-like ATPases CLI14_04945 SM00388 His Kinase A (phosphoacceptor) domain CLI14_04960 SM00354 helix_turn _helix lactose operon repressor CLI14_05000 SM00825 Beta-ketoacyl synthase CLI14_05005 SM00822 CLI14_05005 CLI14_05015 SM00825 Beta-ketoacyl synthase CLI14_05075 SM00563 Phosphate acyltransferases CLI14_05095 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_05095 SM00387 Histidine kinase-like ATPases CLI14_05095 SM00388 His Kinase A (phosphoacceptor) domain CLI14_05095 SM00448 cheY-homologous receiver domain CLI14_05100 SM00052 Putative diguanylate phosphodiesterase CLI14_05100 SM00421 helix_turn_helix, Lux Regulon CLI14_05100 SM00448 cheY-homologous receiver domain CLI14_05120 SM00382 ATPases associated with a variety of cellular activities CLI14_05125 SM00382 ATPases associated with a variety of cellular activities CLI14_05160 SM00382 ATPases associated with a variety of cellular activities CLI14_05180 SM00382 ATPases associated with a variety of cellular activities CLI14_05195 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_05195 SM00876 Biotin and Thiamin Synthesis associated domain CLI14_05225 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_05235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_05235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_05285 SM00487 DEAD-like helicases superfamily CLI14_05285 SM00490 helicase superfamily c-terminal domain CLI14_05285 SM00982 CLI14_05285 CLI14_05285 SM01058 CarD-like/TRCF domain CLI14_05300 SM00382 ATPases associated with a variety of cellular activities CLI14_05315 SM00849 Metallo-beta-lactamase superfamily CLI14_05320 SM00382 ATPases associated with a variety of cellular activities CLI14_05355 SM00763 PrkA AAA domain CLI14_05375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_05375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_05400 SM00382 ATPases associated with a variety of cellular activities CLI14_05405 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_05405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CLI14_05425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_05425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_05445 SM00491 CLI14_05445 CLI14_05460 SM00052 Putative diguanylate phosphodiesterase CLI14_05475 SM00840 CLI14_05475 CLI14_05485 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLI14_05490 SM00382 ATPases associated with a variety of cellular activities CLI14_05545 SM00028 Tetratricopeptide repeats CLI14_05575 SM00387 Histidine kinase-like ATPases CLI14_05575 SM00388 His Kinase A (phosphoacceptor) domain CLI14_05575 SM00448 cheY-homologous receiver domain CLI14_05615 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_05625 SM00267 diguanylate cyclase CLI14_05670 SM00671 Sel1-like repeats. CLI14_05720 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_05720 SM00866 CLI14_05720 CLI14_05725 SM01022 CLI14_05725 CLI14_05735 SM00841 Elongation factor P, C-terminal CLI14_05735 SM01185 CLI14_05735 CLI14_05745 SM00486 DNA polymerase type-B family CLI14_05750 SM00421 helix_turn_helix, Lux Regulon CLI14_05750 SM00448 cheY-homologous receiver domain CLI14_05755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLI14_05755 SM00465 GIY-YIG type nucleases (URI domain) CLI14_05800 SM00873 B3/4 domain CLI14_05800 SM00874 tRNA synthetase B5 domain CLI14_05800 SM00896 Ferredoxin-fold anticodon binding domain CLI14_05805 SM00411 bacterial (prokaryotic) histone like domain CLI14_05820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLI14_05820 SM00091 PAS domain CLI14_05820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_05830 SM00052 Putative diguanylate phosphodiesterase CLI14_05830 SM00267 diguanylate cyclase CLI14_05850 SM00479 CLI14_05850 CLI14_05865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_05865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_05870 SM00382 ATPases associated with a variety of cellular activities CLI14_05880 SM00382 ATPases associated with a variety of cellular activities CLI14_05915 SM00855 Phosphoglycerate mutase family CLI14_05930 SM00382 ATPases associated with a variety of cellular activities CLI14_05975 SM00028 Tetratricopeptide repeats CLI14_06015 SM00387 Histidine kinase-like ATPases CLI14_06020 SM00448 cheY-homologous receiver domain CLI14_06025 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_06030 SM00260 Two component signalling adaptor domain CLI14_06030 SM00448 cheY-homologous receiver domain CLI14_06035 SM00642 Alpha-amylase domain CLI14_06045 SM00267 diguanylate cyclase CLI14_06060 SM00530 Helix-turn-helix XRE-family like proteins CLI14_06140 SM00382 ATPases associated with a variety of cellular activities CLI14_06140 SM01086 C-terminal, D2-small domain, of ClpB protein CLI14_06165 SM00240 Forkhead associated domain CLI14_06190 SM00220 Serine/Threonine protein kinases, catalytic domain CLI14_06220 SM00862 Transcriptional regulatory protein, C terminal CLI14_06230 SM00342 helix_turn_helix, arabinose operon control protein CLI14_06315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_06330 SM00052 Putative diguanylate phosphodiesterase CLI14_06345 SM00354 helix_turn _helix lactose operon repressor CLI14_06350 SM00640 Glycosyl hydrolases family 32 CLI14_06355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_06360 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_06365 SM00450 Rhodanese Homology Domain CLI14_06370 SM00382 ATPases associated with a variety of cellular activities CLI14_06455 SM00849 Metallo-beta-lactamase superfamily CLI14_06470 SM00347 helix_turn_helix multiple antibiotic resistance protein CLI14_06480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_06485 SM00479 CLI14_06485 CLI14_06490 SM00100 Cyclic nucleotide-monophosphate binding domain CLI14_06490 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_06500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_06505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06510 SM00448 cheY-homologous receiver domain CLI14_06520 SM00073 Histidine Phosphotransfer domain CLI14_06520 SM00260 Two component signalling adaptor domain CLI14_06520 SM00387 Histidine kinase-like ATPases CLI14_06520 SM01231 CLI14_06520 CLI14_06525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_06530 SM00260 Two component signalling adaptor domain CLI14_06535 SM00138 Methyltransferase, chemotaxis proteins CLI14_06545 SM00448 cheY-homologous receiver domain CLI14_06560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_06620 SM00091 PAS domain CLI14_06620 SM00382 ATPases associated with a variety of cellular activities CLI14_06635 SM00267 diguanylate cyclase CLI14_06645 SM01005 Alanine racemase, C-terminal domain CLI14_06650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_06650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_06660 SM00387 Histidine kinase-like ATPases CLI14_06665 SM00448 cheY-homologous receiver domain CLI14_06675 SM00357 Cold shock protein domain CLI14_06690 SM00487 DEAD-like helicases superfamily CLI14_06690 SM00490 helicase superfamily c-terminal domain CLI14_06700 SM00354 helix_turn _helix lactose operon repressor CLI14_06755 SM00479 CLI14_06755 CLI14_06770 SM00382 ATPases associated with a variety of cellular activities CLI14_06770 SM00487 DEAD-like helicases superfamily CLI14_06770 SM00490 helicase superfamily c-terminal domain CLI14_06770 SM00847 Helicase associated domain (HA2) Add an annotation CLI14_06815 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_06820 SM00479 CLI14_06820 CLI14_06875 SM00857 Resolvase, N terminal domain CLI14_06910 SM00487 DEAD-like helicases superfamily CLI14_06910 SM00490 helicase superfamily c-terminal domain CLI14_07005 SM00849 Metallo-beta-lactamase superfamily CLI14_07075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_07085 SM01144 CLI14_07085 CLI14_07110 SM00382 ATPases associated with a variety of cellular activities CLI14_07130 SM00387 Histidine kinase-like ATPases CLI14_07135 SM00421 helix_turn_helix, Lux Regulon CLI14_07135 SM00448 cheY-homologous receiver domain CLI14_07140 SM00382 ATPases associated with a variety of cellular activities CLI14_07175 SM00382 ATPases associated with a variety of cellular activities CLI14_07205 SM00100 Cyclic nucleotide-monophosphate binding domain CLI14_07205 SM00419 helix_turn_helix, cAMP Regulatory protein CLI14_07300 SM00382 ATPases associated with a variety of cellular activities CLI14_07310 SM00981 CLI14_07310 CLI14_07345 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLI14_07345 SM00245 tail specific protease CLI14_07350 SM00945 ProQ/FINO family CLI14_07360 SM00382 ATPases associated with a variety of cellular activities CLI14_07380 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_07420 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_07435 SM00382 ATPases associated with a variety of cellular activities CLI14_07540 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_07540 SM00895 CLI14_07540 CLI14_07565 SM00448 cheY-homologous receiver domain CLI14_07565 SM00862 Transcriptional regulatory protein, C terminal CLI14_07570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_07570 SM00387 Histidine kinase-like ATPases CLI14_07570 SM00388 His Kinase A (phosphoacceptor) domain CLI14_07595 SM00382 ATPases associated with a variety of cellular activities CLI14_07635 SM00342 helix_turn_helix, arabinose operon control protein CLI14_07690 SM00448 cheY-homologous receiver domain CLI14_07695 SM00387 Histidine kinase-like ATPases CLI14_07720 SM00764 Citrate lyase ligase C-terminal domain CLI14_07755 SM00434 DNA Topoisomerase IV CLI14_07785 SM00852 Probable molybdopterin binding domain CLI14_07800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_07800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_07800 SM01049 CLI14_07800 CLI14_07840 SM00382 ATPases associated with a variety of cellular activities CLI14_07865 SM00363 S4 RNA-binding domain CLI14_07870 SM00487 DEAD-like helicases superfamily CLI14_07870 SM00490 helicase superfamily c-terminal domain CLI14_07880 SM00448 cheY-homologous receiver domain CLI14_07880 SM00862 Transcriptional regulatory protein, C terminal CLI14_07885 SM00387 Histidine kinase-like ATPases CLI14_07905 SM00487 DEAD-like helicases superfamily CLI14_07905 SM00490 helicase superfamily c-terminal domain CLI14_07955 SM00382 ATPases associated with a variety of cellular activities CLI14_07995 SM00155 Phospholipase D. Active site motifs. CLI14_08025 SM00382 ATPases associated with a variety of cellular activities CLI14_08045 SM00382 ATPases associated with a variety of cellular activities CLI14_08050 SM00382 ATPases associated with a variety of cellular activities CLI14_08065 SM01131 CLI14_08065 CLI14_08190 SM00448 cheY-homologous receiver domain CLI14_08190 SM00862 Transcriptional regulatory protein, C terminal CLI14_08200 SM00354 helix_turn _helix lactose operon repressor CLI14_08235 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLI14_08235 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLI14_08235 SM00493 CLI14_08235 CLI14_08260 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_08265 SM00382 ATPases associated with a variety of cellular activities CLI14_08265 SM01086 C-terminal, D2-small domain, of ClpB protein CLI14_08275 SM00357 Cold shock protein domain CLI14_08335 SM00528 Domain in histone-like proteins of HNS family CLI14_08375 SM00387 Histidine kinase-like ATPases CLI14_08380 SM00448 cheY-homologous receiver domain CLI14_08445 SM00919 Malic enzyme, NAD binding domain CLI14_08445 SM01274 CLI14_08445 CLI14_08470 SM00267 diguanylate cyclase CLI14_08480 SM00382 ATPases associated with a variety of cellular activities CLI14_08485 SM00382 ATPases associated with a variety of cellular activities CLI14_08510 SM00052 Putative diguanylate phosphodiesterase CLI14_08510 SM00267 diguanylate cyclase CLI14_08515 SM00363 S4 RNA-binding domain CLI14_08525 SM00481 DNA polymerase alpha chain like domain CLI14_08620 SM00052 Putative diguanylate phosphodiesterase CLI14_08620 SM00091 PAS domain CLI14_08625 SM00020 Trypsin-like serine protease CLI14_08630 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_08685 SM00843 CLI14_08685 CLI14_08690 SM00344 helix_turn_helix ASNC type CLI14_08695 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CLI14_08695 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CLI14_08715 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CLI14_08720 SM00028 Tetratricopeptide repeats CLI14_08730 SM00411 bacterial (prokaryotic) histone like domain CLI14_08735 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_08755 SM00411 bacterial (prokaryotic) histone like domain CLI14_08760 SM00382 ATPases associated with a variety of cellular activities CLI14_08760 SM00464 Found in ATP-dependent protease La (LON) CLI14_08765 SM00382 ATPases associated with a variety of cellular activities CLI14_08765 SM00994 ClpX C4-type zinc finger CLI14_08765 SM01086 C-terminal, D2-small domain, of ClpB protein CLI14_08785 SM00387 Histidine kinase-like ATPases CLI14_08785 SM00388 His Kinase A (phosphoacceptor) domain CLI14_08790 SM00382 ATPases associated with a variety of cellular activities CLI14_08790 SM00448 cheY-homologous receiver domain CLI14_08820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_08820 SM00387 Histidine kinase-like ATPases CLI14_08825 SM00448 cheY-homologous receiver domain CLI14_08825 SM00862 Transcriptional regulatory protein, C terminal CLI14_08845 SM00487 DEAD-like helicases superfamily CLI14_08845 SM00490 helicase superfamily c-terminal domain CLI14_08850 SM00642 Alpha-amylase domain CLI14_08890 SM00495 Chitin-binding domain type 3 CLI14_08890 SM00636 CLI14_08890 CLI14_08930 SM00474 3'-5' exonuclease CLI14_08960 SM00487 DEAD-like helicases superfamily CLI14_08960 SM00491 CLI14_08960 CLI14_08985 SM00870 CLI14_08985 CLI14_09005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLI14_09040 SM00493 CLI14_09040 CLI14_09050 SM00382 ATPases associated with a variety of cellular activities CLI14_09070 SM00448 cheY-homologous receiver domain CLI14_09165 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_09170 SM00267 diguanylate cyclase CLI14_09190 SM00852 Probable molybdopterin binding domain CLI14_09195 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_09210 SM00382 ATPases associated with a variety of cellular activities CLI14_09210 SM00448 cheY-homologous receiver domain CLI14_09215 SM00487 DEAD-like helicases superfamily CLI14_09215 SM00490 helicase superfamily c-terminal domain CLI14_09275 SM00923 MbtH-like protein CLI14_09315 SM00900 CLI14_09315 CLI14_09325 SM00478 endonuclease III CLI14_09325 SM00525 CLI14_09325 CLI14_09340 SM00479 CLI14_09340 CLI14_09415 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLI14_09435 SM00387 Histidine kinase-like ATPases CLI14_09440 SM00862 Transcriptional regulatory protein, C terminal CLI14_09470 SM00244 prohibitin homologues CLI14_09480 SM00422 helix_turn_helix, mercury resistance CLI14_09500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLI14_09500 SM00292 breast cancer carboxy-terminal domain CLI14_09500 SM00532 Ligase N family CLI14_09505 SM00771 ZipA, C-terminal domain (FtsZ-binding) CLI14_09540 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_09555 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_09555 SM01091 Transporter associated domain CLI14_09610 SM00936 Penicillin-binding protein 5, C-terminal domain CLI14_09625 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_09735 SM00984 UDP binding domain CLI14_09740 SM00984 UDP binding domain CLI14_09750 SM00226 Low molecular weight phosphatase family CLI14_09795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_09795 SM00387 Histidine kinase-like ATPases CLI14_09795 SM00388 His Kinase A (phosphoacceptor) domain CLI14_09800 SM00448 cheY-homologous receiver domain CLI14_09800 SM00862 Transcriptional regulatory protein, C terminal CLI14_09805 SM00642 Alpha-amylase domain CLI14_09815 SM00354 helix_turn _helix lactose operon repressor CLI14_09830 SM00382 ATPases associated with a variety of cellular activities CLI14_09830 SM00930 CLI14_09830 CLI14_09860 SM00028 Tetratricopeptide repeats CLI14_09865 SM00267 diguanylate cyclase CLI14_09875 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLI14_09875 SM00475 5'-3' exonuclease CLI14_09895 SM00981 CLI14_09895 CLI14_09920 SM00861 Transketolase, pyrimidine binding domain CLI14_10000 SM01211 CLI14_10000 CLI14_10010 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_10025 SM00829 Enoylreductase CLI14_10065 SM00271 DnaJ molecular chaperone homology domain CLI14_10140 SM00382 ATPases associated with a variety of cellular activities CLI14_10150 SM00487 DEAD-like helicases superfamily CLI14_10215 SM00257 Lysin motif CLI14_10310 SM00495 Chitin-binding domain type 3 CLI14_10325 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_10325 SM01240 CLI14_10325 CLI14_10340 SM00382 ATPases associated with a variety of cellular activities CLI14_10345 SM00564 beta-propeller repeat CLI14_10375 SM00562 CLI14_10375 CLI14_10400 SM00271 DnaJ molecular chaperone homology domain CLI14_10445 SM01323 CLI14_10445 CLI14_10460 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_10495 SM00382 ATPases associated with a variety of cellular activities CLI14_10525 SM00091 PAS domain CLI14_10525 SM00387 Histidine kinase-like ATPases CLI14_10525 SM00388 His Kinase A (phosphoacceptor) domain CLI14_10530 SM00448 cheY-homologous receiver domain CLI14_10530 SM00862 Transcriptional regulatory protein, C terminal CLI14_10590 SM00382 ATPases associated with a variety of cellular activities CLI14_10590 SM01086 C-terminal, D2-small domain, of ClpB protein CLI14_10615 SM00830 Chorismate mutase type II CLI14_10625 SM00052 Putative diguanylate phosphodiesterase CLI14_10625 SM00267 diguanylate cyclase CLI14_10645 SM00382 ATPases associated with a variety of cellular activities CLI14_10655 SM00830 Chorismate mutase type II CLI14_10670 SM00448 cheY-homologous receiver domain CLI14_10670 SM00850 LytTr DNA-binding domain CLI14_10725 SM00904 Riboflavin kinase CLI14_10740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLI14_10840 SM00530 Helix-turn-helix XRE-family like proteins CLI14_10920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLI14_10930 SM00927 DNA mismatch repair enzyme MutH CLI14_10945 SM00382 ATPases associated with a variety of cellular activities CLI14_10970 SM00487 DEAD-like helicases superfamily CLI14_10970 SM00490 helicase superfamily c-terminal domain CLI14_10980 SM00052 Putative diguanylate phosphodiesterase CLI14_10980 SM00267 diguanylate cyclase CLI14_11005 SM00052 Putative diguanylate phosphodiesterase CLI14_11005 SM00091 PAS domain CLI14_11005 SM00267 diguanylate cyclase CLI14_11025 SM00347 helix_turn_helix multiple antibiotic resistance protein CLI14_11030 SM00028 Tetratricopeptide repeats CLI14_11035 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_11035 SM00322 K homology RNA-binding domain CLI14_11040 SM01387 CLI14_11040 CLI14_11060 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_11060 SM00322 K homology RNA-binding domain CLI14_11095 SM00382 ATPases associated with a variety of cellular activities CLI14_11105 SM01103 CLI14_11105 CLI14_11175 SM00091 PAS domain CLI14_11175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_11175 SM00387 Histidine kinase-like ATPases CLI14_11175 SM00388 His Kinase A (phosphoacceptor) domain CLI14_11175 SM00448 cheY-homologous receiver domain CLI14_11195 SM00382 ATPases associated with a variety of cellular activities CLI14_11200 SM00382 ATPases associated with a variety of cellular activities CLI14_11220 SM01068 Putative carbohydrate binding domain CLI14_11230 SM00382 ATPases associated with a variety of cellular activities CLI14_11250 SM00938 Nitrogen regulatory protein P-II CLI14_11290 SM00487 DEAD-like helicases superfamily CLI14_11290 SM00490 helicase superfamily c-terminal domain CLI14_11290 SM00847 Helicase associated domain (HA2) Add an annotation CLI14_11340 SM00382 ATPases associated with a variety of cellular activities CLI14_11350 SM00947 Carbonic anhydrase CLI14_11380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_11380 SM00895 CLI14_11380 CLI14_11405 SM00644 CLI14_11405 CLI14_11470 SM00382 ATPases associated with a variety of cellular activities CLI14_11470 SM00962 SRP54-type protein, GTPase domain CLI14_11470 SM00963 SRP54-type protein, helical bundle domain CLI14_11480 SM01091 Transporter associated domain CLI14_11505 SM00829 Enoylreductase CLI14_11570 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLI14_11580 SM00382 ATPases associated with a variety of cellular activities CLI14_11590 SM00382 ATPases associated with a variety of cellular activities CLI14_11615 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CLI14_11615 SM00534 ATPase domain of DNA mismatch repair MUTS family CLI14_11625 SM00257 Lysin motif CLI14_11670 SM00905 Dihydroneopterin aldolase CLI14_11675 SM01207 CLI14_11675 CLI14_11700 SM00400 zinc finger CLI14_11700 SM00493 CLI14_11700 CLI14_11700 SM00766 DNA primase DnaG DnaB-binding CLI14_11715 SM00530 Helix-turn-helix XRE-family like proteins CLI14_11795 SM00487 DEAD-like helicases superfamily CLI14_11865 SM00857 Resolvase, N terminal domain CLI14_11885 SM00530 Helix-turn-helix XRE-family like proteins CLI14_11905 SM00382 ATPases associated with a variety of cellular activities CLI14_11975 SM00530 Helix-turn-helix XRE-family like proteins CLI14_12005 SM00482 DNA polymerase A domain CLI14_12035 SM00886 Stress responsive A/B Barrel Domain CLI14_12075 SM00563 Phosphate acyltransferases CLI14_12080 SM00635 Bacterial Ig-like domain 2 CLI14_12090 SM00420 helix_turn_helix, Deoxyribose operon repressor CLI14_12090 SM01134 CLI14_12090 CLI14_12100 SM00267 diguanylate cyclase CLI14_12140 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLI14_12155 SM00861 Transketolase, pyrimidine binding domain CLI14_12165 SM00731 SprT homologues. CLI14_12190 SM00732 Likely ribonuclease with RNase H fold. CLI14_12220 SM01152 CLI14_12220 CLI14_12235 SM00729 Elongator protein 3, MiaB family, Radical SAM CLI14_12250 SM00478 endonuclease III CLI14_12250 SM00525 CLI14_12250 CLI14_12310 SM00271 DnaJ molecular chaperone homology domain CLI14_12330 SM00650 Ribosomal RNA adenine dimethylases CLI14_12455 SM00530 Helix-turn-helix XRE-family like proteins CLI14_12470 SM00487 DEAD-like helicases superfamily CLI14_12535 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_12560 SM00560 LamG-like jellyroll fold domain CLI14_12605 SM00382 ATPases associated with a variety of cellular activities CLI14_12610 SM00028 Tetratricopeptide repeats CLI14_12620 SM00965 Secretin and TonB N terminus short domain CLI14_12640 SM00052 Putative diguanylate phosphodiesterase CLI14_12640 SM00267 diguanylate cyclase CLI14_12650 SM00421 helix_turn_helix, Lux Regulon CLI14_12670 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_12670 SM00924 MgtE intracellular N domain CLI14_12695 SM01018 B12 binding domain CLI14_12790 SM01005 Alanine racemase, C-terminal domain CLI14_12795 SM00382 ATPases associated with a variety of cellular activities CLI14_12830 SM00838 Elongation factor G C-terminus CLI14_12830 SM00889 Elongation factor G, domain IV CLI14_12870 SM00320 WD40 repeats CLI14_12885 SM00244 prohibitin homologues CLI14_12890 SM00244 prohibitin homologues CLI14_12910 SM00853 MutL C terminal dimerisation domain CLI14_12910 SM01340 CLI14_12910 CLI14_12915 SM00257 Lysin motif CLI14_12915 SM00646 CLI14_12915 CLI14_12975 SM00479 CLI14_12975 CLI14_12995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_12995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_13040 SM00663 RNA polymerase I subunit A N-terminus CLI14_13065 SM00649 Ribosomal protein L11/L12 CLI14_13070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLI14_13070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLI14_13125 SM00155 Phospholipase D. Active site motifs. CLI14_13180 SM00357 Cold shock protein domain CLI14_13180 SM00382 ATPases associated with a variety of cellular activities CLI14_13180 SM00959 Rho termination factor, N-terminal domain CLI14_13190 SM00487 DEAD-like helicases superfamily CLI14_13190 SM00490 helicase superfamily c-terminal domain CLI14_13205 SM00072 Guanylate kinase homologues. CLI14_13210 SM01409 CLI14_13210 CLI14_13215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_13215 SM00954 Region found in RelA / SpoT proteins CLI14_13220 SM00487 DEAD-like helicases superfamily CLI14_13220 SM00490 helicase superfamily c-terminal domain CLI14_13230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_13230 SM00387 Histidine kinase-like ATPases CLI14_13230 SM00388 His Kinase A (phosphoacceptor) domain CLI14_13235 SM00448 cheY-homologous receiver domain CLI14_13235 SM00862 Transcriptional regulatory protein, C terminal CLI14_13240 SM00495 Chitin-binding domain type 3 CLI14_13285 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_13285 SM00732 Likely ribonuclease with RNase H fold. CLI14_13365 SM00382 ATPases associated with a variety of cellular activities CLI14_13380 SM00363 S4 RNA-binding domain CLI14_13420 SM01230 CLI14_13420 CLI14_13430 SM00091 PAS domain CLI14_13430 SM00387 Histidine kinase-like ATPases CLI14_13430 SM00388 His Kinase A (phosphoacceptor) domain CLI14_13435 SM00382 ATPases associated with a variety of cellular activities CLI14_13435 SM00448 cheY-homologous receiver domain CLI14_13440 SM00052 Putative diguanylate phosphodiesterase CLI14_13440 SM00267 diguanylate cyclase CLI14_13440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_13515 SM00360 RNA recognition motif CLI14_13555 SM00530 Helix-turn-helix XRE-family like proteins CLI14_13605 SM00857 Resolvase, N terminal domain CLI14_13640 SM01038 Beta galactosidase small chain CLI14_13680 SM00563 Phosphate acyltransferases CLI14_13705 SM00450 Rhodanese Homology Domain CLI14_13720 SM00382 ATPases associated with a variety of cellular activities CLI14_13725 SM00382 ATPases associated with a variety of cellular activities CLI14_13725 SM00962 SRP54-type protein, GTPase domain CLI14_13725 SM00963 SRP54-type protein, helical bundle domain CLI14_13825 SM00052 Putative diguanylate phosphodiesterase CLI14_13850 SM01144 CLI14_13850 CLI14_13885 SM01219 CLI14_13885 CLI14_13970 SM01001 AIR carboxylase CLI14_13995 SM00257 Lysin motif CLI14_14065 SM00487 DEAD-like helicases superfamily CLI14_14065 SM00491 CLI14_14065 CLI14_14210 SM00829 Enoylreductase CLI14_14270 SM00387 Histidine kinase-like ATPases CLI14_14270 SM00433 TopoisomeraseII CLI14_14280 SM00480 DNA polymerase III beta subunit CLI14_14285 SM00382 ATPases associated with a variety of cellular activities CLI14_14285 SM00760 Bacterial dnaA protein helix-turn-helix domain CLI14_14290 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_14300 SM00382 ATPases associated with a variety of cellular activities CLI14_14315 SM01234 CLI14_14315 CLI14_14340 SM00470 ParB-like nuclease domain CLI14_14370 SM00448 cheY-homologous receiver domain CLI14_14375 SM00073 Histidine Phosphotransfer domain CLI14_14375 SM00260 Two component signalling adaptor domain CLI14_14375 SM00387 Histidine kinase-like ATPases CLI14_14375 SM01231 CLI14_14375 CLI14_14380 SM00260 Two component signalling adaptor domain CLI14_14385 SM00260 Two component signalling adaptor domain CLI14_14390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_14390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_14395 SM00138 Methyltransferase, chemotaxis proteins CLI14_14405 SM00448 cheY-homologous receiver domain CLI14_14410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_14420 SM00331 Sigma factor PP2C-like phosphatases CLI14_14420 SM00448 cheY-homologous receiver domain CLI14_14430 SM00382 ATPases associated with a variety of cellular activities CLI14_14435 SM00052 Putative diguanylate phosphodiesterase CLI14_14435 SM00267 diguanylate cyclase CLI14_14455 SM00421 helix_turn_helix, Lux Regulon CLI14_14470 SM00342 helix_turn_helix, arabinose operon control protein CLI14_14495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_14495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_14500 SM00344 helix_turn_helix ASNC type CLI14_14520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_14530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_14530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_14530 SM01049 CLI14_14530 CLI14_14540 SM00421 helix_turn_helix, Lux Regulon CLI14_14555 SM00642 Alpha-amylase domain CLI14_14590 SM00849 Metallo-beta-lactamase superfamily CLI14_14600 SM01350 CLI14_14600 CLI14_14625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_14625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_14635 SM00849 Metallo-beta-lactamase superfamily CLI14_14655 SM00354 helix_turn _helix lactose operon repressor CLI14_14675 SM00382 ATPases associated with a variety of cellular activities CLI14_14685 SM00354 helix_turn _helix lactose operon repressor CLI14_14735 SM00342 helix_turn_helix, arabinose operon control protein CLI14_14760 SM00382 ATPases associated with a variety of cellular activities CLI14_14770 SM00822 CLI14_14770 CLI14_14800 SM00495 Chitin-binding domain type 3 CLI14_14820 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CLI14_14835 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_14860 SM00382 ATPases associated with a variety of cellular activities CLI14_14865 SM00267 diguanylate cyclase CLI14_14895 SM00052 Putative diguanylate phosphodiesterase CLI14_14895 SM00267 diguanylate cyclase CLI14_14950 SM00342 helix_turn_helix, arabinose operon control protein CLI14_14965 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_14965 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CLI14_14975 SM00382 ATPases associated with a variety of cellular activities CLI14_14995 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_15010 SM00267 diguanylate cyclase CLI14_15030 SM00267 diguanylate cyclase CLI14_15030 SM01079 CLI14_15030 CLI14_15035 SM00530 Helix-turn-helix XRE-family like proteins CLI14_15045 SM00267 diguanylate cyclase CLI14_15055 SM00260 Two component signalling adaptor domain CLI14_15055 SM00448 cheY-homologous receiver domain CLI14_15065 SM00421 helix_turn_helix, Lux Regulon CLI14_15070 SM00382 ATPases associated with a variety of cellular activities CLI14_15105 SM00421 helix_turn_helix, Lux Regulon CLI14_15110 SM00420 helix_turn_helix, Deoxyribose operon repressor CLI14_15110 SM01134 CLI14_15110 CLI14_15115 SM00091 PAS domain CLI14_15115 SM00267 diguanylate cyclase CLI14_15125 SM00342 helix_turn_helix, arabinose operon control protein CLI14_15140 SM00421 helix_turn_helix, Lux Regulon CLI14_15140 SM00448 cheY-homologous receiver domain CLI14_15170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_15210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLI14_15210 SM00382 ATPases associated with a variety of cellular activities CLI14_15220 SM01322 CLI14_15220 CLI14_15225 SM00357 Cold shock protein domain CLI14_15240 SM00448 cheY-homologous receiver domain CLI14_15255 SM01240 CLI14_15255 CLI14_15260 SM00387 Histidine kinase-like ATPases CLI14_15260 SM00388 His Kinase A (phosphoacceptor) domain CLI14_15260 SM00448 cheY-homologous receiver domain CLI14_15290 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLI14_15295 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLI14_15315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_15320 SM00481 DNA polymerase alpha chain like domain CLI14_15335 SM00387 Histidine kinase-like ATPases CLI14_15340 SM00421 helix_turn_helix, Lux Regulon CLI14_15340 SM00448 cheY-homologous receiver domain CLI14_15370 SM00829 Enoylreductase CLI14_15395 SM00507 HNH nucleases CLI14_15405 SM00267 diguanylate cyclase CLI14_15420 SM00028 Tetratricopeptide repeats CLI14_15425 SM00327 von Willebrand factor (vWF) type A domain CLI14_15445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_15445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_15460 SM00642 Alpha-amylase domain CLI14_15465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_15465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_15540 SM00347 helix_turn_helix multiple antibiotic resistance protein CLI14_15555 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_15555 SM00382 ATPases associated with a variety of cellular activities CLI14_15560 SM00028 Tetratricopeptide repeats CLI14_15575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_15575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_15585 SM01057 Eukaryotic-type carbonic anhydrase CLI14_15590 SM00052 Putative diguanylate phosphodiesterase CLI14_15590 SM00267 diguanylate cyclase CLI14_15640 SM00271 DnaJ molecular chaperone homology domain CLI14_15650 SM00052 Putative diguanylate phosphodiesterase CLI14_15650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CLI14_15650 SM00267 diguanylate cyclase CLI14_15665 SM00382 ATPases associated with a variety of cellular activities CLI14_15680 SM00797 Allophanate hydrolase subunit 2 CLI14_15685 SM00796 Allophanate hydrolase subunit 1 CLI14_15700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_15710 SM00487 DEAD-like helicases superfamily CLI14_15710 SM00490 helicase superfamily c-terminal domain CLI14_15730 SM00382 ATPases associated with a variety of cellular activities CLI14_15735 SM00327 von Willebrand factor (vWF) type A domain CLI14_15750 SM00382 ATPases associated with a variety of cellular activities CLI14_15895 SM00387 Histidine kinase-like ATPases CLI14_15895 SM00388 His Kinase A (phosphoacceptor) domain CLI14_15895 SM00448 cheY-homologous receiver domain CLI14_15935 SM00851 MGS-like domain CLI14_15945 SM00387 Histidine kinase-like ATPases CLI14_15945 SM00388 His Kinase A (phosphoacceptor) domain CLI14_15945 SM00448 cheY-homologous receiver domain CLI14_15970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_15970 SM00387 Histidine kinase-like ATPases CLI14_15970 SM00388 His Kinase A (phosphoacceptor) domain CLI14_15975 SM00448 cheY-homologous receiver domain CLI14_15985 SM00342 helix_turn_helix, arabinose operon control protein CLI14_15990 SM00495 Chitin-binding domain type 3 CLI14_15990 SM00636 CLI14_15990 CLI14_16000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLI14_16000 SM00267 diguanylate cyclase CLI14_16030 SM00382 ATPases associated with a variety of cellular activities CLI14_16040 SM00267 diguanylate cyclase CLI14_16040 SM00448 cheY-homologous receiver domain CLI14_16050 SM00448 cheY-homologous receiver domain CLI14_16055 SM00448 cheY-homologous receiver domain CLI14_16065 SM00387 Histidine kinase-like ATPases CLI14_16070 SM00387 Histidine kinase-like ATPases CLI14_16070 SM00388 His Kinase A (phosphoacceptor) domain CLI14_16075 SM00052 Putative diguanylate phosphodiesterase CLI14_16075 SM00267 diguanylate cyclase CLI14_16075 SM00448 cheY-homologous receiver domain CLI14_16080 SM00448 cheY-homologous receiver domain CLI14_16095 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLI14_16120 SM00062 Bacterial periplasmic substrate-binding proteins CLI14_16120 SM00267 diguanylate cyclase CLI14_16170 SM00382 ATPases associated with a variety of cellular activities CLI14_16175 SM00052 Putative diguanylate phosphodiesterase CLI14_16190 SM00867 YceI-like domain CLI14_16195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_16220 SM00861 Transketolase, pyrimidine binding domain CLI14_16235 SM00636 CLI14_16235 CLI14_16240 SM00450 Rhodanese Homology Domain CLI14_16250 SM00852 Probable molybdopterin binding domain CLI14_16300 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_16300 SM00866 CLI14_16300 CLI14_16320 SM00116 Domain in cystathionine beta-synthase and other proteins. CLI14_16560 SM00857 Resolvase, N terminal domain CLI14_16755 SM00360 RNA recognition motif CLI14_16835 SM00479 CLI14_16835 CLI14_16850 SM00530 Helix-turn-helix XRE-family like proteins CLI14_16860 SM00530 Helix-turn-helix XRE-family like proteins CLI14_16910 SM00881 CoA binding domain CLI14_17265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLI14_17270 SM00487 DEAD-like helicases superfamily CLI14_17270 SM00490 helicase superfamily c-terminal domain CLI14_17275 SM00316 Ribosomal protein S1-like RNA-binding domain CLI14_17275 SM00357 Cold shock protein domain CLI14_17275 SM00955 CLI14_17275 CLI14_17315 SM00421 helix_turn_helix, Lux Regulon CLI14_17315 SM00448 cheY-homologous receiver domain CLI14_17320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_17320 SM00387 Histidine kinase-like ATPases CLI14_17335 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CLI14_17380 SM00642 Alpha-amylase domain CLI14_17415 SM00382 ATPases associated with a variety of cellular activities CLI14_17435 SM00420 helix_turn_helix, Deoxyribose operon repressor CLI14_17435 SM01134 CLI14_17435 CLI14_17515 SM00382 ATPases associated with a variety of cellular activities CLI14_17540 SM00387 Histidine kinase-like ATPases CLI14_17540 SM00448 cheY-homologous receiver domain CLI14_17555 SM00354 helix_turn _helix lactose operon repressor CLI14_17595 SM00020 Trypsin-like serine protease CLI14_17605 SM00530 Helix-turn-helix XRE-family like proteins CLI14_17680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_17680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_17685 SM00422 helix_turn_helix, mercury resistance CLI14_17725 SM00382 ATPases associated with a variety of cellular activities CLI14_17730 SM00421 helix_turn_helix, Lux Regulon CLI14_17745 SM00382 ATPases associated with a variety of cellular activities CLI14_17785 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CLI14_17800 SM00458 Ricin-type beta-trefoil CLI14_17810 SM00344 helix_turn_helix ASNC type CLI14_17840 SM00387 Histidine kinase-like ATPases CLI14_17845 SM00448 cheY-homologous receiver domain CLI14_17850 SM00342 helix_turn_helix, arabinose operon control protein CLI14_17860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_17860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_17905 SM01266 CLI14_17905 CLI14_17950 SM00387 Histidine kinase-like ATPases CLI14_17950 SM00388 His Kinase A (phosphoacceptor) domain CLI14_17950 SM00448 cheY-homologous receiver domain CLI14_17955 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLI14_17980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_17980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_17985 SM00073 Histidine Phosphotransfer domain CLI14_17985 SM00091 PAS domain CLI14_17985 SM00387 Histidine kinase-like ATPases CLI14_17985 SM00388 His Kinase A (phosphoacceptor) domain CLI14_17985 SM00448 cheY-homologous receiver domain CLI14_17990 SM00448 cheY-homologous receiver domain CLI14_17990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLI14_18010 SM00052 Putative diguanylate phosphodiesterase CLI14_18015 SM00448 cheY-homologous receiver domain CLI14_18015 SM00850 LytTr DNA-binding domain CLI14_18040 SM00382 ATPases associated with a variety of cellular activities CLI14_18055 SM00642 Alpha-amylase domain CLI14_18130 SM00487 DEAD-like helicases superfamily CLI14_18130 SM00490 helicase superfamily c-terminal domain CLI14_18140 SM00257 Lysin motif CLI14_18150 SM00422 helix_turn_helix, mercury resistance CLI14_18170 SM00028 Tetratricopeptide repeats CLI14_18175 SM00267 diguanylate cyclase CLI14_18245 SM00671 Sel1-like repeats. CLI14_18250 SM00642 Alpha-amylase domain CLI14_18280 SM00642 Alpha-amylase domain CLI14_18290 SM00420 helix_turn_helix, Deoxyribose operon repressor CLI14_18290 SM01134 CLI14_18290 CLI14_18305 SM01007 Class II Aldolase and Adducin N-terminal domain CLI14_18315 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CLI14_18330 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLI14_18330 SM00267 diguanylate cyclase CLI14_18340 SM00382 ATPases associated with a variety of cellular activities CLI14_18350 SM00014 Acid phosphatase homologues CLI14_18365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_18365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_18380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLI14_18380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLI14_18390 SM00382 ATPases associated with a variety of cellular activities CLI14_18395 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_18400 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CLI14_18400 SM00495 Chitin-binding domain type 3 CLI14_18400 SM00636 CLI14_18400 CLI14_18490 SM00382 ATPases associated with a variety of cellular activities CLI14_18495 SM00382 ATPases associated with a variety of cellular activities CLI14_18495 SM01086 C-terminal, D2-small domain, of ClpB protein CLI14_18560 SM00387 Histidine kinase-like ATPases CLI14_18565 SM00448 cheY-homologous receiver domain CLI14_18565 SM00862 Transcriptional regulatory protein, C terminal CLI14_18585 SM00829 Enoylreductase CLI14_18620 SM00487 DEAD-like helicases superfamily CLI14_18620 SM00490 helicase superfamily c-terminal domain CLI14_18625 SM00345 helix_turn_helix gluconate operon transcriptional repressor CLI14_18625 SM00866 CLI14_18625 CLI14_18650 SM00382 ATPases associated with a variety of cellular activities CLI14_18665 SM00382 ATPases associated with a variety of cellular activities CLI14_18675 SM00450 Rhodanese Homology Domain CLI14_18685 SM00052 Putative diguanylate phosphodiesterase CLI14_18695 SM00347 helix_turn_helix multiple antibiotic resistance protein CLI14_18965 SM00382 ATPases associated with a variety of cellular activities CLI14_19040 SM00857 Resolvase, N terminal domain CLI14_19130 SM00382 ATPases associated with a variety of cellular activities CLI14_19135 SM00382 ATPases associated with a variety of cellular activities CLI14_19195 SM00470 ParB-like nuclease domain