locus-tag class description CEQ50_00005 PF00258 Flavodoxin CEQ50_00020 PF01381 Helix-turn-helix CEQ50_00095 PF00589 Phage integrase family CEQ50_00095 PF02899 Phage integrase, N-terminal SAM-like domain CEQ50_00100 PF12631 MnmE helical domain CEQ50_00100 PF10396 GTP-binding protein TrmE N-terminus CEQ50_00100 PF01926 50S ribosome-binding GTPase CEQ50_00105 PF14849 YidC periplasmic domain CEQ50_00105 PF02096 60Kd inner membrane protein CEQ50_00110 PF01809 Putative membrane protein insertion efficiency factor CEQ50_00115 PF00825 Ribonuclease P CEQ50_00120 PF00468 Ribosomal protein L34 CEQ50_00125 PF00005 ABC transporter CEQ50_00130 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_00135 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_00140 PF11638 DnaA N-terminal domain CEQ50_00140 PF08299 Bacterial dnaA protein helix-turn-helix CEQ50_00140 PF00308 Bacterial dnaA protein CEQ50_00145 PF02767 DNA polymerase III beta subunit, central domain CEQ50_00145 PF02768 DNA polymerase III beta subunit, C-terminal domain CEQ50_00145 PF00712 DNA polymerase III beta subunit, N-terminal domain CEQ50_00150 PF02463 RecF/RecN/SMC N terminal domain CEQ50_00155 PF00986 DNA gyrase B subunit, carboxyl terminus CEQ50_00155 PF18053 DNA gyrase B subunit insert domain CEQ50_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_00155 PF01751 Toprim domain CEQ50_00155 PF00204 DNA gyrase B CEQ50_00170 PF00011 Hsp20/alpha crystallin family CEQ50_00175 PF00155 Aminotransferase class I and II CEQ50_00180 PF05746 DALR anticodon binding domain CEQ50_00180 PF02092 Glycyl-tRNA synthetase beta subunit CEQ50_00185 PF02091 Glycyl-tRNA synthetase alpha subunit CEQ50_00190 PF01169 Uncharacterized protein family UPF0016 CEQ50_00200 PF01206 Sulfurtransferase TusA CEQ50_00210 PF03466 LysR substrate binding domain CEQ50_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_00215 PF00107 Zinc-binding dehydrogenase CEQ50_00215 PF08240 Alcohol dehydrogenase GroES-like domain CEQ50_00220 PF00291 Pyridoxal-phosphate dependent enzyme CEQ50_00220 PF00585 C-terminal regulatory domain of Threonine dehydratase CEQ50_00225 PF00920 Dehydratase family CEQ50_00230 PF01063 Amino-transferase class IV CEQ50_00240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ50_00240 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ50_00240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ50_00245 PF01078 Magnesium chelatase, subunit ChlI CEQ50_00245 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEQ50_00285 PF13609 Gram-negative porin CEQ50_00290 PF00005 ABC transporter CEQ50_00295 PF00005 ABC transporter CEQ50_00300 PF06007 Phosphonate metabolism protein PhnJ CEQ50_00305 PF05861 Bacterial phosphonate metabolism protein (PhnI) CEQ50_00340 PF03466 LysR substrate binding domain CEQ50_00340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_00345 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEQ50_00345 PF01078 Magnesium chelatase, subunit ChlI CEQ50_00355 PF01323 DSBA-like thioredoxin domain CEQ50_00360 PF01636 Phosphotransferase enzyme family CEQ50_00365 PF12801 4Fe-4S binding domain CEQ50_00365 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEQ50_00365 PF13746 4Fe-4S dicluster domain CEQ50_00375 PF06288 Protein of unknown function (DUF1040) CEQ50_00385 PF03006 Haemolysin-III related CEQ50_00395 PF02386 Cation transport protein CEQ50_00400 PF02254 TrkA-N domain CEQ50_00400 PF02080 TrkA-C domain CEQ50_00405 PF01189 16S rRNA methyltransferase RsmB/F CEQ50_00405 PF01029 NusB family CEQ50_00410 PF02911 Formyl transferase, C-terminal domain CEQ50_00410 PF00551 Formyl transferase CEQ50_00415 PF01327 Polypeptide deformylase CEQ50_00420 PF01476 LysM domain CEQ50_00425 PF02481 DNA recombination-mediator protein A CEQ50_00425 PF17782 DprA winged helix domain CEQ50_00430 PF04361 Protein of unknown function (DUF494) CEQ50_00435 PF01396 Topoisomerase DNA binding C4 zinc finger CEQ50_00440 PF02222 ATP-grasp domain CEQ50_00440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CEQ50_00445 PF00731 AIR carboxylase CEQ50_00450 PF01300 Telomere recombination CEQ50_00455 PF01218 Coproporphyrinogen III oxidase CEQ50_00460 PF01488 Shikimate / quinate 5-dehydrogenase CEQ50_00460 PF08501 Shikimate dehydrogenase substrate binding domain CEQ50_00460 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEQ50_00465 PF07369 Protein of unknown function (DUF1488) CEQ50_00470 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_00505 PF07219 HemY protein N-terminus CEQ50_00510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CEQ50_00515 PF02602 Uroporphyrinogen-III synthase HemD CEQ50_00520 PF03900 Porphobilinogen deaminase, C-terminal domain CEQ50_00520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEQ50_00525 PF12633 Adenylate cyclase NT domain CEQ50_00525 PF01295 Adenylate cyclase, class-I CEQ50_00530 PF01491 Frataxin-like domain CEQ50_00540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEQ50_00540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEQ50_00545 PF01678 Diaminopimelate epimerase CEQ50_00555 PF00589 Phage integrase family CEQ50_00555 PF02899 Phage integrase, N-terminal SAM-like domain CEQ50_00560 PF13419 Haloacid dehalogenase-like hydrolase CEQ50_00580 PF12146 Serine aminopeptidase, S33 CEQ50_00585 PF01810 LysE type translocator CEQ50_00590 PF08668 HDOD domain CEQ50_00590 PF00563 EAL domain CEQ50_00595 PF00210 Ferritin-like domain CEQ50_00625 PF01914 MarC family integral membrane protein CEQ50_00640 PF02881 SRP54-type protein, helical bundle domain CEQ50_00640 PF00448 SRP54-type protein, GTPase domain CEQ50_00645 PF00005 ABC transporter CEQ50_00650 PF18075 FtsX extracellular domain CEQ50_00655 PF00140 Sigma-70 factor, region 1.2 CEQ50_00655 PF04542 Sigma-70 region 2 CEQ50_00655 PF04545 Sigma-70, region 4 CEQ50_00660 PF00581 Rhodanese-like domain CEQ50_00665 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CEQ50_00665 PF01694 Rhomboid family CEQ50_00670 PF03748 Flagellar basal body-associated protein FliL CEQ50_00675 PF04345 Chorismate lyase CEQ50_00680 PF01040 UbiA prenyltransferase family CEQ50_00685 PF01553 Acyltransferase CEQ50_00690 PF01726 LexA DNA binding domain CEQ50_00690 PF00717 Peptidase S24-like CEQ50_00700 PF01554 MatE CEQ50_00710 PF00440 Bacterial regulatory proteins, tetR family CEQ50_00715 PF07226 Protein of unknown function (DUF1422) CEQ50_00720 PF02929 Beta galactosidase small chain CEQ50_00720 PF00703 Glycosyl hydrolases family 2 CEQ50_00720 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEQ50_00720 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEQ50_00720 PF16353 Domain of unknown function(DUF4981) CEQ50_00750 PF02472 Biopolymer transport protein ExbD/TolR CEQ50_00755 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_00760 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_00770 PF07715 TonB-dependent Receptor Plug Domain CEQ50_00775 PF06472 ABC transporter transmembrane region 2 CEQ50_00775 PF00005 ABC transporter CEQ50_00780 PF00675 Insulinase (Peptidase family M16) CEQ50_00780 PF05193 Peptidase M16 inactive domain CEQ50_00795 PF00665 Integrase core domain CEQ50_00800 PF04002 RadC-like JAB domain CEQ50_00815 PF06803 Protein of unknown function (DUF1232) CEQ50_00870 PF05958 tRNA (Uracil-5-)-methyltransferase CEQ50_00895 PF02796 Helix-turn-helix domain of resolvase CEQ50_00895 PF00239 Resolvase, N terminal domain CEQ50_00905 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEQ50_00935 PF03050 Transposase IS66 family CEQ50_00935 PF13817 IS66 C-terminal element CEQ50_00935 PF13007 Transposase C of IS166 homeodomain CEQ50_00935 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_00945 PF00884 Sulfatase CEQ50_00945 PF08019 Phosphoethanolamine transferase EptA/EptB CEQ50_00950 PF01219 Prokaryotic diacylglycerol kinase CEQ50_00970 PF03050 Transposase IS66 family CEQ50_00970 PF13817 IS66 C-terminal element CEQ50_00970 PF13007 Transposase C of IS166 homeodomain CEQ50_00970 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_00990 PF07804 HipA-like C-terminal domain CEQ50_00990 PF13657 HipA N-terminal domain CEQ50_01015 PF00593 TonB dependent receptor CEQ50_01015 PF07715 TonB-dependent Receptor Plug Domain CEQ50_01025 PF01177 Asp/Glu/Hydantoin racemase CEQ50_01060 PF00962 Adenosine/AMP deaminase CEQ50_01065 PF03707 Bacterial signalling protein N terminal repeat CEQ50_01065 PF00563 EAL domain CEQ50_01065 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_01065 PF13188 PAS domain CEQ50_01070 PF02954 Bacterial regulatory protein, Fis family CEQ50_01070 PF00158 Sigma-54 interaction domain CEQ50_01070 PF00072 Response regulator receiver domain CEQ50_01075 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_01075 PF00989 PAS fold CEQ50_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_01085 PF00120 Glutamine synthetase, catalytic domain CEQ50_01085 PF03951 Glutamine synthetase, beta-Grasp domain CEQ50_01100 PF02580 D-Tyr-tRNA(Tyr) deacylase CEQ50_01105 PF09500 Putative thioesterase (yiiD_Cterm) CEQ50_01105 PF00583 Acetyltransferase (GNAT) family CEQ50_01115 PF01293 Phosphoenolpyruvate carboxykinase CEQ50_01120 PF01430 Hsp33 protein CEQ50_01125 PF01479 S4 domain CEQ50_01130 PF11356 Type II secretion system protein C CEQ50_01135 PF03958 Bacterial type II/III secretion system short domain CEQ50_01135 PF00263 Bacterial type II and III secretion system protein CEQ50_01140 PF00437 Type II/IV secretion system protein CEQ50_01145 PF00482 Type II secretion system (T2SS), protein F CEQ50_01150 PF08334 Type II secretion system (T2SS), protein G CEQ50_01150 PF07963 Prokaryotic N-terminal methylation motif CEQ50_01155 PF12019 Type II transport protein GspH CEQ50_01160 PF02501 Type II secretion system (T2SS), protein I CEQ50_01160 PF07963 Prokaryotic N-terminal methylation motif CEQ50_01165 PF07963 Prokaryotic N-terminal methylation motif CEQ50_01165 PF11612 Type II secretion system (T2SS), protein J CEQ50_01170 PF03934 Type II secretion system (T2SS), protein K CEQ50_01175 PF12693 GspL periplasmic domain CEQ50_01175 PF05134 Type II secretion system (T2SS), protein L CEQ50_01180 PF04612 Type II secretion system (T2SS), protein M CEQ50_01185 PF01203 Type II secretion system (T2SS), protein N CEQ50_01190 PF00459 Inositol monophosphatase family CEQ50_01195 PF00293 NUDIX domain CEQ50_01200 PF01521 Iron-sulphur cluster biosynthesis CEQ50_01200 PF01106 NifU-like domain CEQ50_01205 PF00156 Phosphoribosyl transferase domain CEQ50_01210 PF00561 alpha/beta hydrolase fold CEQ50_01220 PF16921 Tex protein YqgF-like domain CEQ50_01220 PF00575 S1 RNA binding domain CEQ50_01220 PF09371 Tex-like protein N-terminal domain CEQ50_01220 PF17674 HHH domain CEQ50_01225 PF01272 Transcription elongation factor, GreA/GreB, C-term CEQ50_01225 PF03449 Transcription elongation factor, N-terminal CEQ50_01235 PF06942 GlpM protein CEQ50_01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_01245 PF03466 LysR substrate binding domain CEQ50_01255 PF00881 Nitroreductase family CEQ50_01265 PF06483 Chitinase C CEQ50_01265 PF00704 Glycosyl hydrolases family 18 CEQ50_01270 PF00072 Response regulator receiver domain CEQ50_01270 PF00486 Transcriptional regulatory protein, C terminal CEQ50_01275 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_01275 PF00672 HAMP domain CEQ50_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_01280 PF00860 Permease family CEQ50_01285 PF17191 RecG wedge domain CEQ50_01285 PF00271 Helicase conserved C-terminal domain CEQ50_01285 PF00270 DEAD/DEAH box helicase CEQ50_01290 PF02824 TGS domain CEQ50_01290 PF04607 Region found in RelA / SpoT proteins CEQ50_01290 PF13291 ACT domain CEQ50_01295 PF01192 RNA polymerase Rpb6 CEQ50_01300 PF00625 Guanylate kinase CEQ50_01305 PF02592 Putative vitamin uptake transporter CEQ50_01315 PF01797 Transposase IS200 like CEQ50_01320 PF02541 Ppx/GppA phosphatase family CEQ50_01325 PF00270 DEAD/DEAH box helicase CEQ50_01325 PF00271 Helicase conserved C-terminal domain CEQ50_01330 PF00085 Thioredoxin CEQ50_01335 PF07498 Rho termination factor, N-terminal domain CEQ50_01335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ50_01335 PF07497 Rho termination factor, RNA-binding domain CEQ50_01345 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEQ50_01350 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ50_01350 PF00970 Oxidoreductase FAD-binding domain CEQ50_01350 PF00175 Oxidoreductase NAD-binding domain CEQ50_01355 PF00175 Oxidoreductase NAD-binding domain CEQ50_01405 PF13091 PLD-like domain CEQ50_01415 PF01565 FAD binding domain CEQ50_01415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEQ50_01420 PF08279 HTH domain CEQ50_01420 PF02237 Biotin protein ligase C terminal domain CEQ50_01420 PF03099 Biotin/lipoate A/B protein ligase family CEQ50_01425 PF00485 Phosphoribulokinase / Uridine kinase family CEQ50_01450 PF00009 Elongation factor Tu GTP binding domain CEQ50_01450 PF03144 Elongation factor Tu domain 2 CEQ50_01450 PF03143 Elongation factor Tu C-terminal domain CEQ50_01455 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CEQ50_01460 PF02357 Transcription termination factor nusG CEQ50_01460 PF00467 KOW motif CEQ50_01465 PF00298 Ribosomal protein L11, RNA binding domain CEQ50_01465 PF03946 Ribosomal protein L11, N-terminal domain CEQ50_01470 PF00687 Ribosomal protein L1p/L10e family CEQ50_01475 PF00466 Ribosomal protein L10 CEQ50_01480 PF16320 Ribosomal protein L7/L12 dimerisation domain CEQ50_01480 PF00542 Ribosomal protein L7/L12 C-terminal domain CEQ50_01485 PF04560 RNA polymerase Rpb2, domain 7 CEQ50_01485 PF00562 RNA polymerase Rpb2, domain 6 CEQ50_01485 PF10385 RNA polymerase beta subunit external 1 domain CEQ50_01485 PF04565 RNA polymerase Rpb2, domain 3 CEQ50_01485 PF04561 RNA polymerase Rpb2, domain 2 CEQ50_01485 PF04563 RNA polymerase beta subunit CEQ50_01490 PF05000 RNA polymerase Rpb1, domain 4 CEQ50_01490 PF04998 RNA polymerase Rpb1, domain 5 CEQ50_01490 PF04983 RNA polymerase Rpb1, domain 3 CEQ50_01490 PF04997 RNA polymerase Rpb1, domain 1 CEQ50_01490 PF00623 RNA polymerase Rpb1, domain 2 CEQ50_01495 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CEQ50_01500 PF09297 NADH pyrophosphatase zinc ribbon domain CEQ50_01500 PF00293 NUDIX domain CEQ50_01505 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEQ50_01510 PF00440 Bacterial regulatory proteins, tetR family CEQ50_01510 PF08360 QacR-like protein, C-terminal region CEQ50_01520 PF01551 Peptidase family M23 CEQ50_01525 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CEQ50_01525 PF01676 Metalloenzyme superfamily CEQ50_01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_01535 PF02743 Cache domain CEQ50_01535 PF00672 HAMP domain CEQ50_01540 PF02080 TrkA-C domain CEQ50_01540 PF03600 Citrate transporter CEQ50_01545 PF02666 Phosphatidylserine decarboxylase CEQ50_01550 PF03193 RsgA GTPase CEQ50_01555 PF00929 Exonuclease CEQ50_01605 PF08331 Domain of unknown function (DUF1730) CEQ50_01610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CEQ50_01615 PF01520 N-acetylmuramoyl-L-alanine amidase CEQ50_01620 PF01119 DNA mismatch repair protein, C-terminal domain CEQ50_01620 PF08676 MutL C terminal dimerisation domain CEQ50_01630 PF17209 Hfq protein CEQ50_01635 PF01926 50S ribosome-binding GTPase CEQ50_01635 PF13167 GTP-binding GTPase N-terminal CEQ50_01635 PF16360 GTP-binding GTPase Middle Region CEQ50_01640 PF12221 Bacterial membrane protein N terminal CEQ50_01640 PF01145 SPFH domain / Band 7 family CEQ50_01645 PF01145 SPFH domain / Band 7 family CEQ50_01650 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CEQ50_01655 PF04102 SlyX CEQ50_01665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ50_01665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEQ50_01670 PF13309 HTH domain CEQ50_01670 PF08348 YheO-like PAS domain CEQ50_01675 PF02635 DsrE/DsrF-like family CEQ50_01680 PF02635 DsrE/DsrF-like family CEQ50_01685 PF04077 DsrH like protein CEQ50_01690 PF00164 Ribosomal protein S12/S23 CEQ50_01695 PF00177 Ribosomal protein S7p/S5e CEQ50_01700 PF00679 Elongation factor G C-terminus CEQ50_01700 PF00009 Elongation factor Tu GTP binding domain CEQ50_01700 PF03764 Elongation factor G, domain IV CEQ50_01700 PF14492 Elongation Factor G, domain II CEQ50_01700 PF03144 Elongation factor Tu domain 2 CEQ50_01705 PF03143 Elongation factor Tu C-terminal domain CEQ50_01705 PF03144 Elongation factor Tu domain 2 CEQ50_01705 PF00009 Elongation factor Tu GTP binding domain CEQ50_01710 PF01250 Ribosomal protein S6 CEQ50_01715 PF00436 Single-strand binding protein family CEQ50_01720 PF01084 Ribosomal protein S18 CEQ50_01725 PF01281 Ribosomal protein L9, N-terminal domain CEQ50_01725 PF03948 Ribosomal protein L9, C-terminal domain CEQ50_01735 PF03796 DnaB-like helicase C terminal domain CEQ50_01735 PF00772 DnaB-like helicase N terminal domain CEQ50_01740 PF00842 Alanine racemase, C-terminal domain CEQ50_01740 PF01168 Alanine racemase, N-terminal domain CEQ50_01745 PF00342 Phosphoglucose isomerase CEQ50_01755 PF01475 Ferric uptake regulator family CEQ50_01760 PF01207 Dihydrouridine synthase (Dus) CEQ50_01780 PF00667 FAD binding domain CEQ50_01780 PF00175 Oxidoreductase NAD-binding domain CEQ50_01780 PF00258 Flavodoxin CEQ50_01785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEQ50_01785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEQ50_01790 PF01507 Phosphoadenosine phosphosulfate reductase family CEQ50_01870 PF00999 Sodium/hydrogen exchanger family CEQ50_01875 PF02607 B12 binding domain CEQ50_01875 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEQ50_01875 PF00809 Pterin binding enzyme CEQ50_01875 PF02574 Homocysteine S-methyltransferase CEQ50_01875 PF02310 B12 binding domain CEQ50_01880 PF01842 ACT domain CEQ50_01880 PF00696 Amino acid kinase family CEQ50_01885 PF00266 Aminotransferase class-V CEQ50_01900 PF00571 CBS domain CEQ50_01900 PF03448 MgtE intracellular N domain CEQ50_01900 PF01769 Divalent cation transporter CEQ50_01910 PF17760 UvrA interaction domain CEQ50_01910 PF00005 ABC transporter CEQ50_01910 PF17755 UvrA DNA-binding domain CEQ50_01915 PF00483 Nucleotidyl transferase CEQ50_01920 PF00196 Bacterial regulatory proteins, luxR family CEQ50_01950 PF03050 Transposase IS66 family CEQ50_01950 PF13817 IS66 C-terminal element CEQ50_01950 PF13007 Transposase C of IS166 homeodomain CEQ50_01950 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_01965 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_01965 PF13817 IS66 C-terminal element CEQ50_01965 PF03050 Transposase IS66 family CEQ50_01965 PF13007 Transposase C of IS166 homeodomain CEQ50_01970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEQ50_02000 PF01555 DNA methylase CEQ50_02000 PF18273 Type III R-M EcoP15I C-terminal domain CEQ50_02005 PF08774 VRR-NUC domain CEQ50_02005 PF04851 Type III restriction enzyme, res subunit CEQ50_02020 PF00436 Single-strand binding protein family CEQ50_02025 PF00563 EAL domain CEQ50_02025 PF17157 Gammaproteobacterial periplasmic sensor domain CEQ50_02025 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_02045 PF03958 Bacterial type II/III secretion system short domain CEQ50_02045 PF00263 Bacterial type II and III secretion system protein CEQ50_02050 PF13401 AAA domain CEQ50_02050 PF01471 Putative peptidoglycan binding domain CEQ50_02060 PF00437 Type II/IV secretion system protein CEQ50_02060 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEQ50_02065 PF00482 Type II secretion system (T2SS), protein F CEQ50_02075 PF07963 Prokaryotic N-terminal methylation motif CEQ50_02075 PF00114 Pilin (bacterial filament) CEQ50_02080 PF00114 Pilin (bacterial filament) CEQ50_02080 PF07963 Prokaryotic N-terminal methylation motif CEQ50_02115 PF04085 rod shape-determining protein MreC CEQ50_02120 PF04093 rod shape-determining protein MreD CEQ50_02125 PF02545 Maf-like protein CEQ50_02130 PF10150 Ribonuclease E/G family CEQ50_02130 PF00575 S1 RNA binding domain CEQ50_02135 PF13502 AsmA-like C-terminal region CEQ50_02135 PF13116 Protein of unknown function CEQ50_02140 PF00795 Carbon-nitrogen hydrolase CEQ50_02145 PF01523 Putative modulator of DNA gyrase CEQ50_02160 PF13817 IS66 C-terminal element CEQ50_02160 PF13007 Transposase C of IS166 homeodomain CEQ50_02160 PF03050 Transposase IS66 family CEQ50_02160 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_02165 PF01797 Transposase IS200 like CEQ50_02180 PF06877 Regulator of ribonuclease activity B CEQ50_02195 PF00582 Universal stress protein family CEQ50_02205 PF16868 NMT1-like family CEQ50_02220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEQ50_02220 PF00056 lactate/malate dehydrogenase, NAD binding domain CEQ50_02225 PF13520 Amino acid permease CEQ50_02230 PF00348 Polyprenyl synthetase CEQ50_02245 PF01016 Ribosomal L27 protein CEQ50_02250 PF01926 50S ribosome-binding GTPase CEQ50_02250 PF01018 GTP1/OBG CEQ50_02255 PF06738 Putative threonine/serine exporter CEQ50_02260 PF12821 Threonine/Serine exporter, ThrE CEQ50_02265 PF00186 Dihydrofolate reductase CEQ50_02270 PF00149 Calcineurin-like phosphoesterase CEQ50_02275 PF04379 ApaG domain CEQ50_02280 PF00398 Ribosomal RNA adenine dimethylase CEQ50_02285 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEQ50_02290 PF09312 SurA N-terminal domain CEQ50_02295 PF03968 OstA-like protein CEQ50_02295 PF04453 LPS transport system D CEQ50_02300 PF00226 DnaJ domain CEQ50_02300 PF05099 Tellurite resistance protein TerB CEQ50_02350 PF01464 Transglycosylase SLT domain CEQ50_02350 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CEQ50_02355 PF04362 Bacterial Fe(2+) trafficking CEQ50_02360 PF14815 NUDIX domain CEQ50_02360 PF00730 HhH-GPD superfamily base excision DNA repair protein CEQ50_02360 PF00633 Helix-hairpin-helix motif CEQ50_02365 PF02390 Putative methyltransferase CEQ50_02370 PF04960 Glutaminase CEQ50_02375 PF04055 Radical SAM superfamily CEQ50_02375 PF06969 HemN C-terminal domain CEQ50_02380 PF01725 Ham1 family CEQ50_02390 PF02594 Uncharacterised ACR, YggU family COG1872 CEQ50_02395 PF02325 YGGT family CEQ50_02400 PF03807 NADP oxidoreductase coenzyme F420-dependent CEQ50_02400 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEQ50_02405 PF01168 Alanine racemase, N-terminal domain CEQ50_02410 PF00437 Type II/IV secretion system protein CEQ50_02415 PF00437 Type II/IV secretion system protein CEQ50_02420 PF03652 Holliday junction resolvase CEQ50_02425 PF02622 Uncharacterized ACR, COG1678 CEQ50_02430 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEQ50_02430 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEQ50_02435 PF04452 RNA methyltransferase CEQ50_02440 PF04231 Endonuclease I CEQ50_02445 PF10263 SprT-like family CEQ50_02445 PF17283 SprT-like zinc ribbon domain CEQ50_02450 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEQ50_02450 PF02772 S-adenosylmethionine synthetase, central domain CEQ50_02450 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEQ50_02455 PF02779 Transketolase, pyrimidine binding domain CEQ50_02455 PF00456 Transketolase, thiamine diphosphate binding domain CEQ50_02455 PF02780 Transketolase, C-terminal domain CEQ50_02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_02460 PF03466 LysR substrate binding domain CEQ50_02465 PF07715 TonB-dependent Receptor Plug Domain CEQ50_02465 PF00593 TonB dependent receptor CEQ50_02470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ50_02470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEQ50_02475 PF00162 Phosphoglycerate kinase CEQ50_02485 PF01116 Fructose-bisphosphate aldolase class-II CEQ50_02490 PF00924 Mechanosensitive ion channel CEQ50_02490 PF05552 Conserved TM helix CEQ50_02495 PF01810 LysE type translocator CEQ50_02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_02500 PF03466 LysR substrate binding domain CEQ50_02510 PF17158 Membrane-associated sensor, integral membrane domain CEQ50_02510 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_02515 PF00224 Pyruvate kinase, barrel domain CEQ50_02515 PF02887 Pyruvate kinase, alpha/beta domain CEQ50_02520 PF00455 DeoR C terminal sensor domain CEQ50_02520 PF08220 DeoR-like helix-turn-helix domain CEQ50_02525 PF01380 SIS domain CEQ50_02535 PF00472 RF-1 domain CEQ50_02540 PF05638 Type VI secretion system effector, Hcp CEQ50_02545 PF04717 Type VI secretion system, phage-baseplate injector CEQ50_02545 PF16671 Actin cross-linking domain CEQ50_02580 PF13280 WYL domain CEQ50_02580 PF08220 DeoR-like helix-turn-helix domain CEQ50_02660 PF13817 IS66 C-terminal element CEQ50_02660 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_02660 PF13007 Transposase C of IS166 homeodomain CEQ50_02660 PF03050 Transposase IS66 family CEQ50_02685 PF02899 Phage integrase, N-terminal SAM-like domain CEQ50_02685 PF00589 Phage integrase family CEQ50_02705 PF00140 Sigma-70 factor, region 1.2 CEQ50_02705 PF04539 Sigma-70 region 3 CEQ50_02705 PF04545 Sigma-70, region 4 CEQ50_02705 PF04542 Sigma-70 region 2 CEQ50_02705 PF04546 Sigma-70, non-essential region CEQ50_02705 PF03979 Sigma-70 factor, region 1.1 CEQ50_02710 PF01807 CHC2 zinc finger CEQ50_02710 PF08275 DNA primase catalytic core, N-terminal domain CEQ50_02710 PF08278 DNA primase DnaG DnaB-binding CEQ50_02710 PF10410 DnaB-helicase binding domain of primase CEQ50_02715 PF09424 Yqey-like protein CEQ50_02735 PF02660 Glycerol-3-phosphate acyltransferase CEQ50_02740 PF02152 Dihydroneopterin aldolase CEQ50_02745 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEQ50_02750 PF02673 Bacitracin resistance protein BacA CEQ50_02755 PF04977 Septum formation initiator CEQ50_02760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEQ50_02765 PF02542 YgbB family CEQ50_02770 PF01142 tRNA pseudouridine synthase D (TruD) CEQ50_02775 PF01975 Survival protein SurE CEQ50_02785 PF01476 LysM domain CEQ50_02785 PF01551 Peptidase family M23 CEQ50_02790 PF04545 Sigma-70, region 4 CEQ50_02790 PF04542 Sigma-70 region 2 CEQ50_02790 PF04539 Sigma-70 region 3 CEQ50_02790 PF00140 Sigma-70 factor, region 1.2 CEQ50_02795 PF05192 MutS domain III CEQ50_02795 PF05188 MutS domain II CEQ50_02795 PF01624 MutS domain I CEQ50_02795 PF00488 MutS domain V CEQ50_02795 PF05190 MutS family domain IV CEQ50_02800 PF00291 Pyridoxal-phosphate dependent enzyme CEQ50_02810 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_02815 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_02820 PF00005 ABC transporter CEQ50_02820 PF12857 TOBE-like domain CEQ50_02825 PF02464 Competence-damaged protein CEQ50_02830 PF00154 recA bacterial DNA recombination protein CEQ50_02835 PF02631 RecX family CEQ50_02840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEQ50_02840 PF01411 tRNA synthetases class II (A) CEQ50_02840 PF02272 DHHA1 domain CEQ50_02845 PF13840 ACT domain CEQ50_02845 PF01842 ACT domain CEQ50_02845 PF00696 Amino acid kinase family CEQ50_02895 PF04277 Oxaloacetate decarboxylase, gamma chain CEQ50_02900 PF00682 HMGL-like CEQ50_02900 PF00364 Biotin-requiring enzyme CEQ50_02900 PF02436 Conserved carboxylase domain CEQ50_02905 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CEQ50_02910 PF08240 Alcohol dehydrogenase GroES-like domain CEQ50_02910 PF00107 Zinc-binding dehydrogenase CEQ50_02915 PF09335 SNARE associated Golgi protein CEQ50_02920 PF00675 Insulinase (Peptidase family M16) CEQ50_02920 PF05193 Peptidase M16 inactive domain CEQ50_02925 PF04262 Glutamate-cysteine ligase CEQ50_02935 PF03471 Transporter associated domain CEQ50_02935 PF01595 Cyclin M transmembrane N-terminal domain CEQ50_02935 PF00571 CBS domain CEQ50_02940 PF01578 Cytochrome C assembly protein CEQ50_02945 PF00448 SRP54-type protein, GTPase domain CEQ50_02945 PF02978 Signal peptide binding domain CEQ50_02945 PF02881 SRP54-type protein, helical bundle domain CEQ50_02960 PF01746 tRNA (Guanine-1)-methyltransferase CEQ50_02965 PF01245 Ribosomal protein L19 CEQ50_02970 PF03884 DNA gyrase inhibitor YacG CEQ50_02975 PF07072 Cell division protein CEQ50_02980 PF01121 Dephospho-CoA kinase CEQ50_02985 PF06750 Bacterial Peptidase A24 N-terminal domain CEQ50_02985 PF01478 Type IV leader peptidase family CEQ50_02990 PF00482 Type II secretion system (T2SS), protein F CEQ50_02995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEQ50_02995 PF00437 Type II/IV secretion system protein CEQ50_03000 PF00114 Pilin (bacterial filament) CEQ50_03000 PF07963 Prokaryotic N-terminal methylation motif CEQ50_03005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEQ50_03005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEQ50_03010 PF01510 N-acetylmuramoyl-L-alanine amidase CEQ50_03015 PF00258 Flavodoxin CEQ50_03020 PF02899 Phage integrase, N-terminal SAM-like domain CEQ50_03020 PF00589 Phage integrase family CEQ50_03025 PF13098 Thioredoxin-like domain CEQ50_03025 PF10411 Disulfide bond isomerase protein N-terminus CEQ50_03030 PF17768 RecJ OB domain CEQ50_03030 PF02272 DHHA1 domain CEQ50_03030 PF01368 DHH family CEQ50_03035 PF00392 Bacterial regulatory proteins, gntR family CEQ50_03035 PF07729 FCD domain CEQ50_03040 PF17831 Pyruvate dehydrogenase E1 component middle domain CEQ50_03040 PF00456 Transketolase, thiamine diphosphate binding domain CEQ50_03045 PF02817 e3 binding domain CEQ50_03045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEQ50_03045 PF00364 Biotin-requiring enzyme CEQ50_03050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_03050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ50_03055 PF00440 Bacterial regulatory proteins, tetR family CEQ50_03060 PF00156 Phosphoribosyl transferase domain CEQ50_03065 PF00484 Carbonic anhydrase CEQ50_03070 PF00916 Sulfate permease family CEQ50_03070 PF01740 STAS domain CEQ50_03075 PF00005 ABC transporter CEQ50_03080 PF01061 ABC-2 type transporter CEQ50_03085 PF02281 Transposase Tn5 dimerisation domain CEQ50_03085 PF01609 Transposase DDE domain CEQ50_03085 PF14706 Transposase DNA-binding CEQ50_03090 PF02569 Pantoate-beta-alanine ligase CEQ50_03095 PF02548 Ketopantoate hydroxymethyltransferase CEQ50_03100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEQ50_03105 PF12627 Probable RNA and SrmB- binding site of polymerase A CEQ50_03105 PF01743 Poly A polymerase head domain CEQ50_03105 PF12626 Polymerase A arginine-rich C-terminus CEQ50_03110 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEQ50_03115 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEQ50_03120 PF17746 SfsA N-terminal OB domain CEQ50_03120 PF03749 Sugar fermentation stimulation protein RE domain CEQ50_03125 PF08482 ATP-dependent helicase C-terminal CEQ50_03125 PF00271 Helicase conserved C-terminal domain CEQ50_03125 PF04408 Helicase associated domain (HA2) CEQ50_03125 PF00270 DEAD/DEAH box helicase CEQ50_03130 PF14814 Bifunctional transglycosylase second domain CEQ50_03130 PF00905 Penicillin binding protein transpeptidase domain CEQ50_03130 PF00912 Transglycosylase CEQ50_03135 PF01734 Patatin-like phospholipase CEQ50_03140 PF11791 Aconitate B N-terminal domain CEQ50_03140 PF06434 Aconitate hydratase 2 N-terminus CEQ50_03140 PF00330 Aconitase family (aconitate hydratase) CEQ50_03145 PF02595 Glycerate kinase family CEQ50_03150 PF02447 GntP family permease CEQ50_03155 PF17853 GGDEF-like domain CEQ50_03155 PF05651 Putative sugar diacid recognition CEQ50_03155 PF13556 PucR C-terminal helix-turn-helix domain CEQ50_03160 PF06062 Uncharacterised protein family (UPF0231) CEQ50_03165 PF00543 Nitrogen regulatory protein P-II CEQ50_03170 PF00909 Ammonium Transporter Family CEQ50_03175 PF13416 Bacterial extracellular solute-binding protein CEQ50_03185 PF00005 ABC transporter CEQ50_03185 PF08402 TOBE domain CEQ50_03190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ50_03190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ50_03190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ50_03195 PF06165 Glycosyltransferase family 36 CEQ50_03195 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CEQ50_03200 PF00728 Glycosyl hydrolase family 20, catalytic domain CEQ50_03200 PF02838 Glycosyl hydrolase family 20, domain 2 CEQ50_03205 PF01869 BadF/BadG/BcrA/BcrD ATPase family CEQ50_03215 PF00005 ABC transporter CEQ50_03215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_03220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_03220 PF00005 ABC transporter CEQ50_03225 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ50_03225 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_03230 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_03235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ50_03240 PF09308 LuxQ, periplasmic CEQ50_03240 PF00072 Response regulator receiver domain CEQ50_03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_03240 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_03245 PF05175 Methyltransferase small domain CEQ50_03245 PF08468 Methyltransferase small domain N-terminal CEQ50_03250 PF01594 AI-2E family transporter CEQ50_03255 PF00202 Aminotransferase class-III CEQ50_03260 PF01521 Iron-sulphur cluster biosynthesis CEQ50_03270 PF00873 AcrB/AcrD/AcrF family CEQ50_03275 PF01551 Peptidase family M23 CEQ50_03275 PF01476 LysM domain CEQ50_03275 PF08525 Opacity-associated protein A N-terminal motif CEQ50_03280 PF00579 tRNA synthetases class I (W and Y) CEQ50_03280 PF01479 S4 domain CEQ50_03290 PF03448 MgtE intracellular N domain CEQ50_03290 PF01769 Divalent cation transporter CEQ50_03290 PF00571 CBS domain CEQ50_03295 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CEQ50_03300 PF13609 Gram-negative porin CEQ50_03305 PF03449 Transcription elongation factor, N-terminal CEQ50_03305 PF01272 Transcription elongation factor, GreA/GreB, C-term CEQ50_03310 PF01985 CRS1 / YhbY (CRM) domain CEQ50_03315 PF01728 FtsJ-like methyltransferase CEQ50_03320 PF01434 Peptidase family M41 CEQ50_03320 PF06480 FtsH Extracellular CEQ50_03320 PF17862 AAA+ lid domain CEQ50_03320 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_03325 PF00809 Pterin binding enzyme CEQ50_03330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ50_03330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ50_03330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ50_03330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ50_03335 PF03840 Preprotein translocase SecG subunit CEQ50_03350 PF17384 RimP C-terminal SH3 domain CEQ50_03350 PF02576 RimP N-terminal domain CEQ50_03355 PF13184 NusA-like KH domain CEQ50_03355 PF00575 S1 RNA binding domain CEQ50_03355 PF08529 NusA N-terminal domain CEQ50_03360 PF00009 Elongation factor Tu GTP binding domain CEQ50_03360 PF04760 Translation initiation factor IF-2, N-terminal region CEQ50_03360 PF08364 Bacterial translation initiation factor IF-2 associated region CEQ50_03360 PF11987 Translation-initiation factor 2 CEQ50_03365 PF02033 Ribosome-binding factor A CEQ50_03370 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEQ50_03370 PF16198 tRNA pseudouridylate synthase B C-terminal domain CEQ50_03370 PF09157 Pseudouridine synthase II TruB, C-terminal CEQ50_03375 PF00312 Ribosomal protein S15 CEQ50_03380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEQ50_03380 PF01138 3' exoribonuclease family, domain 1 CEQ50_03380 PF03725 3' exoribonuclease family, domain 2 CEQ50_03380 PF00575 S1 RNA binding domain CEQ50_03380 PF00013 KH domain CEQ50_03385 PF13181 Tetratricopeptide repeat CEQ50_03385 PF07719 Tetratricopeptide repeat CEQ50_03390 PF01047 MarR family CEQ50_03410 PF00563 EAL domain CEQ50_03410 PF03707 Bacterial signalling protein N terminal repeat CEQ50_03410 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_03420 PF13508 Acetyltransferase (GNAT) domain CEQ50_03430 PF00583 Acetyltransferase (GNAT) family CEQ50_03435 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_03435 PF00563 EAL domain CEQ50_03435 PF03707 Bacterial signalling protein N terminal repeat CEQ50_03440 PF16658 Class II release factor RF3, C-terminal domain CEQ50_03440 PF03144 Elongation factor Tu domain 2 CEQ50_03440 PF00009 Elongation factor Tu GTP binding domain CEQ50_03445 PF00271 Helicase conserved C-terminal domain CEQ50_03445 PF00270 DEAD/DEAH box helicase CEQ50_03450 PF05175 Methyltransferase small domain CEQ50_03455 PF05525 Branched-chain amino acid transport protein CEQ50_03465 PF00152 tRNA synthetases class II (D, K and N) CEQ50_03465 PF01336 OB-fold nucleic acid binding domain CEQ50_03475 PF01797 Transposase IS200 like CEQ50_03480 PF00158 Sigma-54 interaction domain CEQ50_03480 PF00072 Response regulator receiver domain CEQ50_03480 PF02954 Bacterial regulatory protein, Fis family CEQ50_03490 PF00248 Aldo/keto reductase family CEQ50_03495 PF02976 DNA mismatch repair enzyme MutH CEQ50_03500 PF00293 NUDIX domain CEQ50_03505 PF05524 PEP-utilising enzyme, N-terminal CEQ50_03505 PF00391 PEP-utilising enzyme, mobile domain CEQ50_03505 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ50_03505 PF01590 GAF domain CEQ50_03510 PF01925 Sulfite exporter TauE/SafE CEQ50_03515 PF01790 Prolipoprotein diacylglyceryl transferase CEQ50_03525 PF00303 Thymidylate synthase CEQ50_03540 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEQ50_03540 PF18766 SWI2/SNF2 ATPase CEQ50_03540 PF11867 Domain of unknown function (DUF3387) CEQ50_03545 PF01420 Type I restriction modification DNA specificity domain CEQ50_03550 PF02384 N-6 DNA Methylase CEQ50_03565 PF07804 HipA-like C-terminal domain CEQ50_03565 PF13657 HipA N-terminal domain CEQ50_03590 PF14490 Helix-hairpin-helix containing domain CEQ50_03590 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CEQ50_03590 PF13538 UvrD-like helicase C-terminal domain CEQ50_03610 PF13817 IS66 C-terminal element CEQ50_03610 PF03050 Transposase IS66 family CEQ50_03610 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_03610 PF13007 Transposase C of IS166 homeodomain CEQ50_03640 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_03640 PF13817 IS66 C-terminal element CEQ50_03640 PF03050 Transposase IS66 family CEQ50_03640 PF13007 Transposase C of IS166 homeodomain CEQ50_03660 PF13007 Transposase C of IS166 homeodomain CEQ50_03660 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_03660 PF13817 IS66 C-terminal element CEQ50_03660 PF03050 Transposase IS66 family CEQ50_03675 PF02690 Na+/Pi-cotransporter CEQ50_03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_03680 PF03466 LysR substrate binding domain CEQ50_03685 PF01022 Bacterial regulatory protein, arsR family CEQ50_03690 PF01649 Ribosomal protein S20 CEQ50_03695 PF03023 Lipid II flippase MurJ CEQ50_03700 PF06574 FAD synthetase CEQ50_03700 PF01687 Riboflavin kinase CEQ50_03705 PF00133 tRNA synthetases class I (I, L, M and V) CEQ50_03705 PF08264 Anticodon-binding domain of tRNA CEQ50_03705 PF06827 Zinc finger found in FPG and IleRS CEQ50_03710 PF01252 Signal peptidase (SPase) II CEQ50_03715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ50_03720 PF02401 LytB protein CEQ50_03725 PF02554 Carbon starvation protein CstA CEQ50_03735 PF13580 SIS domain CEQ50_03740 PF03702 Anhydro-N-acetylmuramic acid kinase CEQ50_03745 PF00933 Glycosyl hydrolase family 3 N terminal domain CEQ50_03750 PF04397 LytTr DNA-binding domain CEQ50_03750 PF00072 Response regulator receiver domain CEQ50_03755 PF06580 Histidine kinase CEQ50_03755 PF07694 5TMR of 5TMR-LYT CEQ50_03760 PF00793 DAHP synthetase I family CEQ50_03765 PF01817 Chorismate mutase type II CEQ50_03765 PF02153 Prephenate dehydrogenase CEQ50_03770 PF07238 PilZ domain CEQ50_03775 PF00005 ABC transporter CEQ50_03775 PF12848 ABC transporter CEQ50_03780 PF01464 Transglycosylase SLT domain CEQ50_03780 PF14718 Soluble lytic murein transglycosylase L domain CEQ50_03790 PF01931 Protein of unknown function DUF84 CEQ50_03795 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_03795 PF00563 EAL domain CEQ50_03800 PF13416 Bacterial extracellular solute-binding protein CEQ50_03805 PF01817 Chorismate mutase type II CEQ50_03805 PF00800 Prephenate dehydratase CEQ50_03810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEQ50_03815 PF13525 Outer membrane lipoprotein CEQ50_03820 PF00849 RNA pseudouridylate synthase CEQ50_03820 PF01479 S4 domain CEQ50_03830 PF07724 AAA domain (Cdc48 subfamily) CEQ50_03830 PF17871 AAA lid domain CEQ50_03830 PF02861 Clp amino terminal domain, pathogenicity island component CEQ50_03830 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ50_03830 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_03840 PF01797 Transposase IS200 like CEQ50_03880 PF00881 Nitroreductase family CEQ50_03885 PF00037 4Fe-4S binding domain CEQ50_03895 PF04381 Putative exonuclease, RdgC CEQ50_03900 PF00486 Transcriptional regulatory protein, C terminal CEQ50_03900 PF00072 Response regulator receiver domain CEQ50_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_03905 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_03905 PF11808 Phosphate regulon sensor protein PhoR CEQ50_03905 PF00989 PAS fold CEQ50_03910 PF12849 PBP superfamily domain CEQ50_03915 PF02541 Ppx/GppA phosphatase family CEQ50_03920 PF13090 Polyphosphate kinase C-terminal domain 2 CEQ50_03920 PF02503 Polyphosphate kinase middle domain CEQ50_03920 PF13089 Polyphosphate kinase N-terminal domain CEQ50_03920 PF17941 Polyphosphate kinase C-terminal domain 1 CEQ50_03925 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_03930 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_03935 PF00005 ABC transporter CEQ50_03940 PF01895 PhoU domain CEQ50_03945 PF03932 CutC family CEQ50_03950 PF00578 AhpC/TSA family CEQ50_03950 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEQ50_03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_03955 PF03466 LysR substrate binding domain CEQ50_03960 PF01274 Malate synthase CEQ50_03965 PF00463 Isocitrate lyase family CEQ50_03970 PF00571 CBS domain CEQ50_03975 PF02547 Queuosine biosynthesis protein CEQ50_03980 PF01702 Queuine tRNA-ribosyltransferase CEQ50_03985 PF02699 Preprotein translocase subunit CEQ50_03990 PF02355 Protein export membrane protein CEQ50_03990 PF07549 SecD/SecF GG Motif CEQ50_03990 PF13721 SecD export protein N-terminal TM region CEQ50_03995 PF07549 SecD/SecF GG Motif CEQ50_03995 PF02355 Protein export membrane protein CEQ50_04000 PF00459 Inositol monophosphatase family CEQ50_04005 PF00588 SpoU rRNA Methylase family CEQ50_04010 PF02082 Transcriptional regulator CEQ50_04015 PF00266 Aminotransferase class-V CEQ50_04020 PF01592 NifU-like N terminal domain CEQ50_04025 PF01521 Iron-sulphur cluster biosynthesis CEQ50_04030 PF00226 DnaJ domain CEQ50_04030 PF07743 HSCB C-terminal oligomerisation domain CEQ50_04035 PF00012 Hsp70 protein CEQ50_04040 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ50_04045 PF04384 Iron-sulphur cluster assembly CEQ50_04050 PF00883 Cytosol aminopeptidase family, catalytic domain CEQ50_04050 PF12404 Peptidase CEQ50_04055 PF00334 Nucleoside diphosphate kinase CEQ50_04060 PF04055 Radical SAM superfamily CEQ50_04065 PF13464 Domain of unknown function (DUF4115) CEQ50_04070 PF04551 GcpE protein CEQ50_04075 PF13393 Histidyl-tRNA synthetase CEQ50_04075 PF03129 Anticodon binding domain CEQ50_04080 PF09976 Tetratricopeptide repeat-like domain CEQ50_04085 PF13360 PQQ-like domain CEQ50_04090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEQ50_04090 PF01926 50S ribosome-binding GTPase CEQ50_04100 PF02601 Exonuclease VII, large subunit CEQ50_04100 PF13742 OB-fold nucleic acid binding domain CEQ50_04105 PF00478 IMP dehydrogenase / GMP reductase domain CEQ50_04105 PF00571 CBS domain CEQ50_04110 PF00117 Glutamine amidotransferase class-I CEQ50_04110 PF00958 GMP synthase C terminal domain CEQ50_04110 PF02540 NAD synthase CEQ50_04115 PF08543 Phosphomethylpyrimidine kinase CEQ50_04120 PF00704 Glycosyl hydrolases family 18 CEQ50_04120 PF06483 Chitinase C CEQ50_04125 PF01184 GPR1/FUN34/yaaH family CEQ50_04130 PF01235 Sodium:alanine symporter family CEQ50_04135 PF01266 FAD dependent oxidoreductase CEQ50_04150 PF00141 Peroxidase CEQ50_04155 PF05043 Mga helix-turn-helix domain CEQ50_04155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_04155 PF08279 HTH domain CEQ50_04155 PF00874 PRD domain CEQ50_04160 PF07071 KDGP aldolase CEQ50_04165 PF03841 L-seryl-tRNA selenium transferase CEQ50_04170 PF01979 Amidohydrolase family CEQ50_04200 PF02151 UvrB/uvrC motif CEQ50_04200 PF04851 Type III restriction enzyme, res subunit CEQ50_04200 PF00271 Helicase conserved C-terminal domain CEQ50_04200 PF17757 UvrB interaction domain CEQ50_04200 PF12344 Ultra-violet resistance protein B CEQ50_04285 PF00239 Resolvase, N terminal domain CEQ50_04285 PF02796 Helix-turn-helix domain of resolvase CEQ50_04300 PF01420 Type I restriction modification DNA specificity domain CEQ50_04305 PF02384 N-6 DNA Methylase CEQ50_04305 PF12161 HsdM N-terminal domain CEQ50_04320 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CEQ50_04320 PF08463 EcoEI R protein C-terminal CEQ50_04320 PF00271 Helicase conserved C-terminal domain CEQ50_04320 PF04851 Type III restriction enzyme, res subunit CEQ50_04335 PF00589 Phage integrase family CEQ50_04335 PF13356 Arm DNA-binding domain CEQ50_04345 PF01668 SmpB protein CEQ50_04350 PF03364 Polyketide cyclase / dehydrase and lipid transport CEQ50_04355 PF03658 RnfH family Ubiquitin CEQ50_04360 PF04355 SmpA / OmlA family CEQ50_04365 PF02463 RecF/RecN/SMC N terminal domain CEQ50_04375 PF03222 Tryptophan/tyrosine permease family CEQ50_04380 PF01212 Beta-eliminating lyase CEQ50_04385 PF01513 ATP-NAD kinase CEQ50_04390 PF01025 GrpE CEQ50_04395 PF00012 Hsp70 protein CEQ50_04400 PF00684 DnaJ central domain CEQ50_04400 PF00226 DnaJ domain CEQ50_04400 PF01556 DnaJ C terminal domain CEQ50_04405 PF00114 Pilin (bacterial filament) CEQ50_04405 PF07963 Prokaryotic N-terminal methylation motif CEQ50_04430 PF03806 AbgT putative transporter family CEQ50_04435 PF00756 Putative esterase CEQ50_04440 PF08240 Alcohol dehydrogenase GroES-like domain CEQ50_04440 PF00107 Zinc-binding dehydrogenase CEQ50_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_04445 PF03466 LysR substrate binding domain CEQ50_04450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ50_04455 PF01464 Transglycosylase SLT domain CEQ50_04455 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_04465 PF02769 AIR synthase related protein, C-terminal domain CEQ50_04465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CEQ50_04465 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CEQ50_04480 PF06786 Uncharacterised protein family (UPF0253) CEQ50_04485 PF04391 Protein of unknown function (DUF533) CEQ50_04490 PF04073 Aminoacyl-tRNA editing domain CEQ50_04490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEQ50_04490 PF03129 Anticodon binding domain CEQ50_04495 PF18389 TrmO C-terminal domain CEQ50_04495 PF01980 tRNA-methyltransferase O CEQ50_04500 PF01197 Ribosomal protein L31 CEQ50_04505 PF00444 Ribosomal protein L36 CEQ50_04510 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CEQ50_04535 PF04287 tRNA pseudouridine synthase C CEQ50_04540 PF00849 RNA pseudouridylate synthase CEQ50_04545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEQ50_04545 PF02779 Transketolase, pyrimidine binding domain CEQ50_04545 PF02780 Transketolase, C-terminal domain CEQ50_04550 PF00348 Polyprenyl synthetase CEQ50_04555 PF02609 Exonuclease VII small subunit CEQ50_04560 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_04565 PF00691 OmpA family CEQ50_04565 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEQ50_04570 PF02568 Thiamine biosynthesis protein (ThiI) CEQ50_04570 PF02926 THUMP domain CEQ50_04575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_04575 PF03466 LysR substrate binding domain CEQ50_04580 PF04241 Protein of unknown function (DUF423) CEQ50_04590 PF01367 5'-3' exonuclease, C-terminal SAM fold CEQ50_04590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEQ50_04595 PF03641 Possible lysine decarboxylase CEQ50_04595 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CEQ50_04595 PF11892 Domain of unknown function (DUF3412) CEQ50_04600 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_04610 PF14489 QueF-like protein CEQ50_04610 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CEQ50_04615 PF07348 Syd protein (SUKH-2) CEQ50_04620 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CEQ50_04625 PF03180 NLPA lipoprotein CEQ50_04630 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_04635 PF00005 ABC transporter CEQ50_04635 PF09383 NIL domain CEQ50_04650 PF00356 Bacterial regulatory proteins, lacI family CEQ50_04655 PF00367 phosphotransferase system, EIIB CEQ50_04655 PF02378 Phosphotransferase system, EIIC CEQ50_04660 PF16657 Maltogenic Amylase, C-terminal domain CEQ50_04660 PF00128 Alpha amylase, catalytic domain CEQ50_04665 PF00486 Transcriptional regulatory protein, C terminal CEQ50_04665 PF00072 Response regulator receiver domain CEQ50_04670 PF00672 HAMP domain CEQ50_04670 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_04705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_04710 PF00873 AcrB/AcrD/AcrF family CEQ50_04715 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEQ50_04720 PF02350 UDP-N-acetylglucosamine 2-epimerase CEQ50_04725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEQ50_04725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEQ50_04725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEQ50_04730 PF13439 Glycosyltransferase Family 4 CEQ50_04730 PF00534 Glycosyl transferases group 1 CEQ50_04745 PF00534 Glycosyl transferases group 1 CEQ50_04745 PF13439 Glycosyltransferase Family 4 CEQ50_04765 PF00534 Glycosyl transferases group 1 CEQ50_04765 PF13439 Glycosyltransferase Family 4 CEQ50_04775 PF03808 Glycosyl transferase WecB/TagA/CpsF family CEQ50_04795 PF12561 ToxR activated gene A lipoprotein domain CEQ50_04795 PF17945 Beta/Gamma crystallin CEQ50_04820 PF13614 AAA domain CEQ50_04825 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEQ50_04825 PF10531 SLBB domain CEQ50_04825 PF02563 Polysaccharide biosynthesis/export protein CEQ50_04835 PF02397 Bacterial sugar transferase CEQ50_04845 PF00464 Serine hydroxymethyltransferase CEQ50_04860 PF03099 Biotin/lipoate A/B protein ligase family CEQ50_04865 PF04359 Protein of unknown function (DUF493) CEQ50_04870 PF07943 Penicillin-binding protein 5, C-terminal domain CEQ50_04870 PF00768 D-alanyl-D-alanine carboxypeptidase CEQ50_04875 PF05036 Sporulation related domain CEQ50_04875 PF03330 Lytic transglycolase CEQ50_04880 PF01098 Cell cycle protein CEQ50_04885 PF00905 Penicillin binding protein transpeptidase domain CEQ50_04885 PF03717 Penicillin-binding Protein dimerisation domain CEQ50_04890 PF02590 Predicted SPOUT methyltransferase CEQ50_04900 PF06144 DNA polymerase III, delta subunit CEQ50_04900 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CEQ50_04905 PF04390 Lipopolysaccharide-assembly CEQ50_04910 PF13603 Leucyl-tRNA synthetase, Domain 2 CEQ50_04910 PF00133 tRNA synthetases class I (I, L, M and V) CEQ50_04910 PF08264 Anticodon-binding domain of tRNA CEQ50_04915 PF07295 Zinc-ribbon containing domain CEQ50_04920 PF00795 Carbon-nitrogen hydrolase CEQ50_04925 PF00571 CBS domain CEQ50_04925 PF03471 Transporter associated domain CEQ50_04935 PF02562 PhoH-like protein CEQ50_04940 PF00919 Uncharacterized protein family UPF0004 CEQ50_04940 PF01938 TRAM domain CEQ50_04940 PF04055 Radical SAM superfamily CEQ50_04945 PF01494 FAD binding domain CEQ50_04950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEQ50_04955 PF00391 PEP-utilising enzyme, mobile domain CEQ50_04955 PF05524 PEP-utilising enzyme, N-terminal CEQ50_04955 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ50_04960 PF00381 PTS HPr component phosphorylation site CEQ50_04965 PF00291 Pyridoxal-phosphate dependent enzyme CEQ50_04975 PF04354 ZipA, C-terminal FtsZ-binding domain CEQ50_04985 PF13609 Gram-negative porin CEQ50_04990 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CEQ50_04995 PF13411 MerR HTH family regulatory protein CEQ50_05005 PF16200 C-terminal region of band_7 CEQ50_05005 PF01145 SPFH domain / Band 7 family CEQ50_05010 PF00085 Thioredoxin CEQ50_05015 PF01370 NAD dependent epimerase/dehydratase family CEQ50_05015 PF08338 Domain of unknown function (DUF1731) CEQ50_05020 PF12850 Calcineurin-like phosphoesterase superfamily domain CEQ50_05030 PF17323 Trans-membrane regulatory protein ToxS CEQ50_05035 PF00486 Transcriptional regulatory protein, C terminal CEQ50_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_05040 PF00183 Hsp90 protein CEQ50_05045 PF05191 Adenylate kinase, active site lid CEQ50_05050 PF00762 Ferrochelatase CEQ50_05055 PF00854 POT family CEQ50_05060 PF02357 Transcription termination factor nusG CEQ50_05065 PF00733 Asparagine synthase CEQ50_05065 PF13537 Glutamine amidotransferase domain CEQ50_05070 PF00999 Sodium/hydrogen exchanger family CEQ50_05070 PF02254 TrkA-N domain CEQ50_05075 PF00480 ROK family CEQ50_05075 PF01047 MarR family CEQ50_05080 PF01979 Amidohydrolase family CEQ50_05085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEQ50_05085 PF00367 phosphotransferase system, EIIB CEQ50_05085 PF02378 Phosphotransferase system, EIIC CEQ50_05090 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEQ50_05090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CEQ50_05105 PF17848 Acetyl-coA carboxylase zinc finger domain CEQ50_05105 PF01039 Carboxyl transferase domain CEQ50_05110 PF08245 Mur ligase middle domain CEQ50_05110 PF02875 Mur ligase family, glutamate ligase domain CEQ50_05115 PF05036 Sporulation related domain CEQ50_05120 PF02674 Colicin V production protein CEQ50_05125 PF00156 Phosphoribosyl transferase domain CEQ50_05130 PF13726 Na+-H+ antiporter family CEQ50_05130 PF03553 Na+/H+ antiporter family CEQ50_05135 PF00929 Exonuclease CEQ50_05140 PF00691 OmpA family CEQ50_05140 PF18393 MotY N-terminal domain CEQ50_05145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ50_05150 PF10576 Iron-sulfur binding domain of endonuclease III CEQ50_05150 PF00633 Helix-hairpin-helix motif CEQ50_05150 PF00730 HhH-GPD superfamily base excision DNA repair protein CEQ50_05165 PF03116 NQR2, RnfD, RnfE family CEQ50_05170 PF12838 4Fe-4S dicluster domain CEQ50_05170 PF13375 RnfC Barrel sandwich hybrid domain CEQ50_05170 PF10531 SLBB domain CEQ50_05170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEQ50_05175 PF04060 Putative Fe-S cluster CEQ50_05180 PF02508 Rnf-Nqr subunit, membrane protein CEQ50_05185 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CEQ50_05185 PF01648 4'-phosphopantetheinyl transferase superfamily CEQ50_05190 PF07715 TonB-dependent Receptor Plug Domain CEQ50_05195 PF00756 Putative esterase CEQ50_05195 PF11806 Domain of unknown function (DUF3327) CEQ50_05205 PF00501 AMP-binding enzyme CEQ50_05205 PF13193 AMP-binding enzyme C-terminal domain CEQ50_05205 PF00668 Condensation domain CEQ50_05205 PF00550 Phosphopantetheine attachment site CEQ50_05210 PF05977 Transmembrane secretion effector CEQ50_05215 PF00550 Phosphopantetheine attachment site CEQ50_05215 PF00857 Isochorismatase family CEQ50_05220 PF13193 AMP-binding enzyme C-terminal domain CEQ50_05220 PF00501 AMP-binding enzyme CEQ50_05225 PF00425 chorismate binding enzyme CEQ50_05235 PF00793 DAHP synthetase I family CEQ50_05240 PF02927 Cellulase N-terminal ig-like domain CEQ50_05240 PF00759 Glycosyl hydrolase family 9 CEQ50_05240 PF02018 Carbohydrate binding domain CEQ50_05250 PF12344 Ultra-violet resistance protein B CEQ50_05250 PF04851 Type III restriction enzyme, res subunit CEQ50_05250 PF00271 Helicase conserved C-terminal domain CEQ50_05250 PF02151 UvrB/uvrC motif CEQ50_05250 PF17757 UvrB interaction domain CEQ50_05255 PF02954 Bacterial regulatory protein, Fis family CEQ50_05255 PF00072 Response regulator receiver domain CEQ50_05255 PF00158 Sigma-54 interaction domain CEQ50_05260 PF01627 Hpt domain CEQ50_05265 PF01933 Uncharacterised protein family UPF0052 CEQ50_05270 PF04055 Radical SAM superfamily CEQ50_05270 PF06463 Molybdenum Cofactor Synthesis C CEQ50_05275 PF00994 Probable molybdopterin binding domain CEQ50_05280 PF01967 MoaC family CEQ50_05285 PF02597 ThiS family CEQ50_05290 PF02391 MoaE protein CEQ50_05295 PF07694 5TMR of 5TMR-LYT CEQ50_05295 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_05300 PF00392 Bacterial regulatory proteins, gntR family CEQ50_05300 PF00571 CBS domain CEQ50_05300 PF07085 DRTGG domain CEQ50_05300 PF03061 Thioesterase superfamily CEQ50_05305 PF00403 Heavy-metal-associated domain CEQ50_05310 PF01048 Phosphorylase superfamily CEQ50_05320 PF01588 Putative tRNA binding domain CEQ50_05320 PF09334 tRNA synthetases class I (M) CEQ50_05325 PF10609 NUBPL iron-transfer P-loop NTPase CEQ50_05330 PF00485 Phosphoribulokinase / Uridine kinase family CEQ50_05335 PF05170 AsmA family CEQ50_05340 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEQ50_05340 PF12557 Cob(I)alamin adenosyltransferase N terminal CEQ50_05345 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEQ50_05350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEQ50_05360 PF08281 Sigma-70, region 4 CEQ50_05360 PF04542 Sigma-70 region 2 CEQ50_05370 PF02803 Thiolase, C-terminal domain CEQ50_05370 PF00108 Thiolase, N-terminal domain CEQ50_05375 PF00378 Enoyl-CoA hydratase/isomerase CEQ50_05375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEQ50_05375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEQ50_05380 PF00881 Nitroreductase family CEQ50_05385 PF03466 LysR substrate binding domain CEQ50_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_05390 PF00072 Response regulator receiver domain CEQ50_05400 PF04304 Protein of unknown function (DUF454) CEQ50_05405 PF00156 Phosphoribosyl transferase domain CEQ50_05410 PF12170 DNA polymerase III tau subunit V interacting with alpha CEQ50_05410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CEQ50_05410 PF12169 DNA polymerase III subunits gamma and tau domain III CEQ50_05415 PF02575 YbaB/EbfC DNA-binding family CEQ50_05425 PF03692 Putative zinc- or iron-chelating domain CEQ50_05445 PF13847 Methyltransferase domain CEQ50_05450 PF01263 Aldose 1-epimerase CEQ50_05455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ50_05455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEQ50_05460 PF01641 SelR domain CEQ50_05470 PF07023 Protein of unknown function (DUF1315) CEQ50_05475 PF17763 Glutaminase/Asparaginase C-terminal domain CEQ50_05475 PF00710 Asparaginase, N-terminal CEQ50_05480 PF01343 Peptidase family S49 CEQ50_05485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEQ50_05485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_05490 PF01842 ACT domain CEQ50_05490 PF00551 Formyl transferase CEQ50_05500 PF04851 Type III restriction enzyme, res subunit CEQ50_05500 PF13307 Helicase C-terminal domain CEQ50_05505 PF00814 Glycoprotease family CEQ50_05520 PF00561 alpha/beta hydrolase fold CEQ50_05525 PF00501 AMP-binding enzyme CEQ50_05525 PF13193 AMP-binding enzyme C-terminal domain CEQ50_05530 PF01612 3'-5' exonuclease CEQ50_05530 PF00570 HRDC domain CEQ50_05535 PF03776 Septum formation topological specificity factor MinE CEQ50_05540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEQ50_05545 PF05209 Septum formation inhibitor MinC, N-terminal domain CEQ50_05545 PF03775 Septum formation inhibitor MinC, C-terminal domain CEQ50_05550 PF05166 YcgL domain CEQ50_05555 PF13406 Transglycosylase SLT domain CEQ50_05560 PF03466 LysR substrate binding domain CEQ50_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_05565 PF07662 Na+ dependent nucleoside transporter C-terminus CEQ50_05565 PF01773 Na+ dependent nucleoside transporter N-terminus CEQ50_05565 PF07670 Nucleoside recognition CEQ50_05570 PF00704 Glycosyl hydrolases family 18 CEQ50_05570 PF06483 Chitinase C CEQ50_05575 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEQ50_05575 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEQ50_05585 PF01551 Peptidase family M23 CEQ50_05590 PF09905 DNA-binding protein VF530 CEQ50_05600 PF02607 B12 binding domain CEQ50_05600 PF02310 B12 binding domain CEQ50_05600 PF02574 Homocysteine S-methyltransferase CEQ50_05600 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEQ50_05600 PF00809 Pterin binding enzyme CEQ50_05605 PF02028 BCCT, betaine/carnitine/choline family transporter CEQ50_05610 PF02903 Alpha amylase, N-terminal ig-like domain CEQ50_05610 PF00128 Alpha amylase, catalytic domain CEQ50_05610 PF16657 Maltogenic Amylase, C-terminal domain CEQ50_05615 PF00270 DEAD/DEAH box helicase CEQ50_05615 PF00271 Helicase conserved C-terminal domain CEQ50_05625 PF03315 Serine dehydratase beta chain CEQ50_05625 PF03313 Serine dehydratase alpha chain CEQ50_05630 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CEQ50_05635 PF00072 Response regulator receiver domain CEQ50_05635 PF00486 Transcriptional regulatory protein, C terminal CEQ50_05640 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_05640 PF00672 HAMP domain CEQ50_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_05645 PF01547 Bacterial extracellular solute-binding protein CEQ50_05655 PF03480 Bacterial extracellular solute-binding protein, family 7 CEQ50_05660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEQ50_05665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEQ50_05670 PF00072 Response regulator receiver domain CEQ50_05670 PF02954 Bacterial regulatory protein, Fis family CEQ50_05670 PF00158 Sigma-54 interaction domain CEQ50_05675 PF02743 Cache domain CEQ50_05675 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_05685 PF05697 Bacterial trigger factor protein (TF) CEQ50_05685 PF05698 Bacterial trigger factor protein (TF) C-terminus CEQ50_05685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ50_05690 PF00574 Clp protease CEQ50_05695 PF07724 AAA domain (Cdc48 subfamily) CEQ50_05695 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ50_05695 PF06689 ClpX C4-type zinc finger CEQ50_05700 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_05700 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEQ50_05700 PF05362 Lon protease (S16) C-terminal proteolytic domain CEQ50_05705 PF00216 Bacterial DNA-binding protein CEQ50_05710 PF13145 PPIC-type PPIASE domain CEQ50_05720 PF02224 Cytidylate kinase CEQ50_05725 PF00575 S1 RNA binding domain CEQ50_05735 PF06305 Lipopolysaccharide assembly protein A domain CEQ50_05740 PF18073 Rubredoxin metal binding domain CEQ50_05745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ50_05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_05755 PF03466 LysR substrate binding domain CEQ50_05765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEQ50_05765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEQ50_05770 PF01037 Lrp/AsnC ligand binding domain CEQ50_05775 PF01580 FtsK/SpoIIIE family CEQ50_05775 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEQ50_05775 PF17854 FtsK alpha domain CEQ50_05775 PF09397 Ftsk gamma domain CEQ50_05785 PF01435 Peptidase family M48 CEQ50_05795 PF00106 short chain dehydrogenase CEQ50_05820 PF16036 Chalcone isomerase-like CEQ50_05830 PF11842 Domain of unknown function (DUF3362) CEQ50_05830 PF04055 Radical SAM superfamily CEQ50_05830 PF08497 Radical SAM N-terminal CEQ50_05835 PF00089 Trypsin CEQ50_05840 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_05840 PF00563 EAL domain CEQ50_05840 PF01590 GAF domain CEQ50_05840 PF00989 PAS fold CEQ50_05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_05855 PF03466 LysR substrate binding domain CEQ50_05860 PF08267 Cobalamin-independent synthase, N-terminal domain CEQ50_05860 PF01717 Cobalamin-independent synthase, Catalytic domain CEQ50_05870 PF01797 Transposase IS200 like CEQ50_05880 PF03795 YCII-related domain CEQ50_05885 PF03061 Thioesterase superfamily CEQ50_05890 PF04279 Intracellular septation protein A CEQ50_05900 PF00375 Sodium:dicarboxylate symporter family CEQ50_05915 PF00291 Pyridoxal-phosphate dependent enzyme CEQ50_05920 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEQ50_05920 PF00218 Indole-3-glycerol phosphate synthase CEQ50_05925 PF02885 Glycosyl transferase family, helical bundle domain CEQ50_05925 PF00591 Glycosyl transferase family, a/b domain CEQ50_05930 PF00117 Glutamine amidotransferase class-I CEQ50_05935 PF04715 Anthranilate synthase component I, N terminal region CEQ50_05935 PF00425 chorismate binding enzyme CEQ50_05940 PF08056 Tryptophan operon leader peptide CEQ50_05945 PF02811 PHP domain CEQ50_05950 PF01300 Telomere recombination CEQ50_05955 PF01479 S4 domain CEQ50_05955 PF00849 RNA pseudouridylate synthase CEQ50_05960 PF03707 Bacterial signalling protein N terminal repeat CEQ50_05960 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_05960 PF00563 EAL domain CEQ50_05965 PF00005 ABC transporter CEQ50_05965 PF00664 ABC transporter transmembrane region CEQ50_05970 PF00664 ABC transporter transmembrane region CEQ50_05970 PF00005 ABC transporter CEQ50_05975 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_05980 PF00072 Response regulator receiver domain CEQ50_05980 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_05990 PF00266 Aminotransferase class-V CEQ50_05995 PF02698 DUF218 domain CEQ50_06005 PF00390 Malic enzyme, N-terminal domain CEQ50_06005 PF03949 Malic enzyme, NAD binding domain CEQ50_06015 PF01259 SAICAR synthetase CEQ50_06020 PF06826 Predicted Permease Membrane Region CEQ50_06020 PF02080 TrkA-C domain CEQ50_06025 PF00462 Glutaredoxin CEQ50_06030 PF00465 Iron-containing alcohol dehydrogenase CEQ50_06035 PF01418 Helix-turn-helix domain, rpiR family CEQ50_06035 PF01380 SIS domain CEQ50_06040 PF00282 Pyridoxal-dependent decarboxylase conserved domain CEQ50_06050 PF03956 Lysine exporter LysO CEQ50_06060 PF04993 TfoX N-terminal domain CEQ50_06060 PF04994 TfoX C-terminal domain CEQ50_06075 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_06075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_06075 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_06085 PF00266 Aminotransferase class-V CEQ50_06090 PF00206 Lyase CEQ50_06090 PF08328 Adenylosuccinate lyase C-terminal CEQ50_06095 PF04356 Protein of unknown function (DUF489) CEQ50_06110 PF00294 pfkB family carbohydrate kinase CEQ50_06115 PF00816 H-NS histone family CEQ50_06120 PF03553 Na+/H+ antiporter family CEQ50_06125 PF01634 ATP phosphoribosyltransferase CEQ50_06125 PF08029 HisG, C-terminal domain CEQ50_06130 PF00815 Histidinol dehydrogenase CEQ50_06135 PF00155 Aminotransferase class I and II CEQ50_06140 PF00475 Imidazoleglycerol-phosphate dehydratase CEQ50_06140 PF08645 Polynucleotide kinase 3 phosphatase CEQ50_06145 PF00117 Glutamine amidotransferase class-I CEQ50_06150 PF00977 Histidine biosynthesis protein CEQ50_06155 PF00977 Histidine biosynthesis protein CEQ50_06160 PF01502 Phosphoribosyl-AMP cyclohydrolase CEQ50_06160 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEQ50_06165 PF00849 RNA pseudouridylate synthase CEQ50_06170 PF03971 Monomeric isocitrate dehydrogenase CEQ50_06175 PF00313 'Cold-shock' DNA-binding domain CEQ50_06180 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEQ50_06185 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_06185 PF07724 AAA domain (Cdc48 subfamily) CEQ50_06185 PF17871 AAA lid domain CEQ50_06185 PF02861 Clp amino terminal domain, pathogenicity island component CEQ50_06185 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ50_06190 PF01176 Translation initiation factor 1A / IF-1 CEQ50_06195 PF04376 Arginine-tRNA-protein transferase, N terminus CEQ50_06195 PF04377 Arginine-tRNA-protein transferase, C terminus CEQ50_06200 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEQ50_06205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEQ50_06210 PF10692 Protein of unknown function (DUF2498) CEQ50_06215 PF01396 Topoisomerase DNA binding C4 zinc finger CEQ50_06215 PF08272 Topoisomerase I zinc-ribbon-like CEQ50_06215 PF01131 DNA topoisomerase CEQ50_06215 PF01751 Toprim domain CEQ50_06220 PF00483 Nucleotidyl transferase CEQ50_06225 PF08323 Starch synthase catalytic domain CEQ50_06225 PF00534 Glycosyl transferases group 1 CEQ50_06245 PF04994 TfoX C-terminal domain CEQ50_06245 PF04993 TfoX N-terminal domain CEQ50_06250 PF00356 Bacterial regulatory proteins, lacI family CEQ50_06255 PF02613 Nitrate reductase delta subunit CEQ50_06260 PF00072 Response regulator receiver domain CEQ50_06260 PF00486 Transcriptional regulatory protein, C terminal CEQ50_06265 PF02698 DUF218 domain CEQ50_06275 PF17193 MukF C-terminal domain CEQ50_06275 PF17192 MukF middle domain CEQ50_06275 PF03882 MukF winged-helix domain CEQ50_06280 PF04288 MukE-like family CEQ50_06285 PF16330 MukB hinge domain CEQ50_06285 PF04310 MukB N-terminal CEQ50_06300 PF18030 RimK PreATP-grasp domain CEQ50_06300 PF08443 RimK-like ATP-grasp domain CEQ50_06305 PF08003 Protein of unknown function (DUF1698) CEQ50_06310 PF13649 Methyltransferase domain CEQ50_06315 PF01904 Protein of unknown function DUF72 CEQ50_06320 PF02938 GAD domain CEQ50_06320 PF00152 tRNA synthetases class II (D, K and N) CEQ50_06320 PF01336 OB-fold nucleic acid binding domain CEQ50_06325 PF00265 Thymidine kinase CEQ50_06340 PF03466 LysR substrate binding domain CEQ50_06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_06355 PF01226 Formate/nitrite transporter CEQ50_06365 PF01797 Transposase IS200 like CEQ50_06370 PF06796 Periplasmic nitrate reductase protein NapE CEQ50_06375 PF03264 NapC/NirT cytochrome c family, N-terminal region CEQ50_06380 PF01568 Molydopterin dinucleotide binding domain CEQ50_06380 PF18364 Molybdopterin oxidoreductase N-terminal domain CEQ50_06380 PF00384 Molybdopterin oxidoreductase CEQ50_06390 PF02833 DHHA2 domain CEQ50_06390 PF01368 DHH family CEQ50_06400 PF07690 Major Facilitator Superfamily CEQ50_06405 PF02311 AraC-like ligand binding domain CEQ50_06405 PF12833 Helix-turn-helix domain CEQ50_06410 PF02281 Transposase Tn5 dimerisation domain CEQ50_06410 PF01609 Transposase DDE domain CEQ50_06410 PF14706 Transposase DNA-binding CEQ50_06415 PF00005 ABC transporter CEQ50_06420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_06420 PF00005 ABC transporter CEQ50_06425 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ50_06425 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_06430 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_06435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ50_06440 PF02954 Bacterial regulatory protein, Fis family CEQ50_06440 PF00158 Sigma-54 interaction domain CEQ50_06445 PF04012 PspA/IM30 family CEQ50_06450 PF06667 Phage shock protein B CEQ50_06460 PF13673 Acetyltransferase (GNAT) domain CEQ50_06460 PF03352 Methyladenine glycosylase CEQ50_06460 PF13302 Acetyltransferase (GNAT) domain CEQ50_06460 PF00117 Glutamine amidotransferase class-I CEQ50_06460 PF00958 GMP synthase C terminal domain CEQ50_06465 PF01053 Cys/Met metabolism PLP-dependent enzyme CEQ50_06470 PF13091 PLD-like domain CEQ50_06470 PF13396 Phospholipase_D-nuclease N-terminal CEQ50_06475 PF00209 Sodium:neurotransmitter symporter family CEQ50_06480 PF00849 RNA pseudouridylate synthase CEQ50_06490 PF12792 CSS motif domain associated with EAL CEQ50_06490 PF00563 EAL domain CEQ50_06495 PF01066 CDP-alcohol phosphatidyltransferase CEQ50_06500 PF00005 ABC transporter CEQ50_06505 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_06510 PF13416 Bacterial extracellular solute-binding protein CEQ50_06520 PF06945 Protein of unknown function (DUF1289) CEQ50_06530 PF02872 5'-nucleotidase, C-terminal domain CEQ50_06530 PF00149 Calcineurin-like phosphoesterase CEQ50_06540 PF00270 DEAD/DEAH box helicase CEQ50_06540 PF00271 Helicase conserved C-terminal domain CEQ50_06560 PF00672 HAMP domain CEQ50_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_06560 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_06565 PF00486 Transcriptional regulatory protein, C terminal CEQ50_06565 PF00072 Response regulator receiver domain CEQ50_06575 PF00271 Helicase conserved C-terminal domain CEQ50_06575 PF04851 Type III restriction enzyme, res subunit CEQ50_06580 PF01479 S4 domain CEQ50_06580 PF00849 RNA pseudouridylate synthase CEQ50_06585 PF07690 Major Facilitator Superfamily CEQ50_06595 PF11066 Protein of unknown function (DUF2867) CEQ50_06595 PF13460 NAD(P)H-binding CEQ50_06600 PF01554 MatE CEQ50_06605 PF00005 ABC transporter CEQ50_06620 PF06965 Na+/H+ antiporter 1 CEQ50_06630 PF00202 Aminotransferase class-III CEQ50_06635 PF03435 Saccharopine dehydrogenase NADP binding domain CEQ50_06635 PF16653 Saccharopine dehydrogenase C-terminal domain CEQ50_06645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_06645 PF00672 HAMP domain CEQ50_06660 PF00994 Probable molybdopterin binding domain CEQ50_06670 PF00970 Oxidoreductase FAD-binding domain CEQ50_06670 PF00175 Oxidoreductase NAD-binding domain CEQ50_06670 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ50_06675 PF00268 Ribonucleotide reductase, small chain CEQ50_06680 PF02867 Ribonucleotide reductase, barrel domain CEQ50_06680 PF00317 Ribonucleotide reductase, all-alpha domain CEQ50_06680 PF03477 ATP cone domain CEQ50_06690 PF03989 DNA gyrase C-terminal domain, beta-propeller CEQ50_06690 PF00521 DNA gyrase/topoisomerase IV, subunit A CEQ50_06695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_06695 PF12729 Four helix bundle sensory module for signal transduction CEQ50_06695 PF00672 HAMP domain CEQ50_06705 PF01238 Phosphomannose isomerase type I CEQ50_06710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ50_06710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_06710 PF02378 Phosphotransferase system, EIIC CEQ50_06715 PF12833 Helix-turn-helix domain CEQ50_06725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ50_06735 PF02001 Protein of unknown function DUF134 CEQ50_06750 PF13407 Periplasmic binding protein domain CEQ50_06755 PF00005 ABC transporter CEQ50_06760 PF02653 Branched-chain amino acid transport system / permease component CEQ50_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_06765 PF03466 LysR substrate binding domain CEQ50_06770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEQ50_06775 PF01219 Prokaryotic diacylglycerol kinase CEQ50_06780 PF00672 HAMP domain CEQ50_06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_06780 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_06785 PF00486 Transcriptional regulatory protein, C terminal CEQ50_06785 PF00072 Response regulator receiver domain CEQ50_06790 PF01970 Tripartite tricarboxylate transporter TctA family CEQ50_06820 PF00285 Citrate synthase, C-terminal domain CEQ50_06825 PF00694 Aconitase C-terminal domain CEQ50_06825 PF00330 Aconitase family (aconitate hydratase) CEQ50_06830 PF04303 PrpF protein CEQ50_06835 PF00501 AMP-binding enzyme CEQ50_06835 PF13193 AMP-binding enzyme C-terminal domain CEQ50_06835 PF16177 Acetyl-coenzyme A synthetase N-terminus CEQ50_06855 PF04055 Radical SAM superfamily CEQ50_06860 PF06508 Queuosine biosynthesis protein QueC CEQ50_06895 PF17785 PUA-like domain CEQ50_06895 PF10672 S-adenosylmethionine-dependent methyltransferase CEQ50_06900 PF00708 Acylphosphatase CEQ50_06905 PF04358 DsrC like protein CEQ50_06910 PF01027 Inhibitor of apoptosis-promoting Bax1 CEQ50_06915 PF00005 ABC transporter CEQ50_06920 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_06925 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_06930 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_06935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ50_06935 PF14824 Sirohaem biosynthesis protein central CEQ50_06935 PF10414 Sirohaem synthase dimerisation region CEQ50_06940 PF04461 Protein of unknown function (DUF520) CEQ50_06945 PF00793 DAHP synthetase I family CEQ50_06950 PF00391 PEP-utilising enzyme, mobile domain CEQ50_06950 PF02896 PEP-utilising enzyme, TIM barrel domain CEQ50_06950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEQ50_06965 PF17783 CvfB-like winged helix domain CEQ50_06965 PF13509 S1 domain CEQ50_06970 PF01189 16S rRNA methyltransferase RsmB/F CEQ50_06970 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CEQ50_06970 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CEQ50_06975 PF02470 MlaD protein CEQ50_06980 PF04403 Paraquat-inducible protein A CEQ50_06985 PF00664 ABC transporter transmembrane region CEQ50_06985 PF00005 ABC transporter CEQ50_06990 PF13185 GAF domain CEQ50_07000 PF03572 Peptidase family S41 CEQ50_07000 PF17804 Tail specific protease N-terminal domain CEQ50_07000 PF11818 C-terminal domain of tail specific protease (DUF3340) CEQ50_07000 PF00595 PDZ domain CEQ50_07010 PF11940 Domain of unknown function (DUF3458) Ig-like fold CEQ50_07010 PF01433 Peptidase family M1 domain CEQ50_07010 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CEQ50_07020 PF05088 Bacterial NAD-glutamate dehydrogenase CEQ50_07025 PF01180 Dihydroorotate dehydrogenase CEQ50_07030 PF07126 Cell-division protein ZapC CEQ50_07035 PF01170 Putative RNA methylase family UPF0020 CEQ50_07035 PF02926 THUMP domain CEQ50_07035 PF10672 S-adenosylmethionine-dependent methyltransferase CEQ50_07055 PF04957 Ribosome modulation factor CEQ50_07060 PF07977 FabA-like domain CEQ50_07065 PF05362 Lon protease (S16) C-terminal proteolytic domain CEQ50_07065 PF13654 AAA domain CEQ50_07070 PF17414 MatP C-terminal ribbon-helix-helix domain CEQ50_07070 PF06303 MatP N-terminal domain CEQ50_07120 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CEQ50_07120 PF13538 UvrD-like helicase C-terminal domain CEQ50_07120 PF14490 Helix-hairpin-helix containing domain CEQ50_07150 PF03466 LysR substrate binding domain CEQ50_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_07155 PF17848 Acetyl-coA carboxylase zinc finger domain CEQ50_07155 PF01039 Carboxyl transferase domain CEQ50_07165 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEQ50_07180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEQ50_07180 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CEQ50_07190 PF00403 Heavy-metal-associated domain CEQ50_07205 PF00027 Cyclic nucleotide-binding domain CEQ50_07205 PF13545 Crp-like helix-turn-helix domain CEQ50_07210 PF00582 Universal stress protein family CEQ50_07215 PF01171 PP-loop family CEQ50_07235 PF00005 ABC transporter CEQ50_07235 PF08402 TOBE domain CEQ50_07240 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_07245 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_07250 PF13416 Bacterial extracellular solute-binding protein CEQ50_07255 PF13416 Bacterial extracellular solute-binding protein CEQ50_07265 PF01797 Transposase IS200 like CEQ50_07270 PF02146 Sir2 family CEQ50_07275 PF00909 Ammonium Transporter Family CEQ50_07280 PF12848 ABC transporter CEQ50_07280 PF00005 ABC transporter CEQ50_07285 PF00196 Bacterial regulatory proteins, luxR family CEQ50_07285 PF00072 Response regulator receiver domain CEQ50_07290 PF07730 Histidine kinase CEQ50_07290 PF05231 MASE1 CEQ50_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_07295 PF07690 Major Facilitator Superfamily CEQ50_07305 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_07310 PF08402 TOBE domain CEQ50_07310 PF00005 ABC transporter CEQ50_07315 PF12804 MobA-like NTP transferase domain CEQ50_07320 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEQ50_07330 PF00480 ROK family CEQ50_07345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07345 PF00672 HAMP domain CEQ50_07345 PF12729 Four helix bundle sensory module for signal transduction CEQ50_07350 PF00877 NlpC/P60 family CEQ50_07370 PF01554 MatE CEQ50_07375 PF14743 DNA ligase OB-like domain CEQ50_07375 PF01068 ATP dependent DNA ligase domain CEQ50_07380 PF01734 Patatin-like phospholipase CEQ50_07395 PF02472 Biopolymer transport protein ExbD/TolR CEQ50_07400 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_07405 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_07430 PF04389 Peptidase family M28 CEQ50_07430 PF04151 Bacterial pre-peptidase C-terminal domain CEQ50_07435 PF14497 Glutathione S-transferase, C-terminal domain CEQ50_07435 PF02798 Glutathione S-transferase, N-terminal domain CEQ50_07445 PF04209 homogentisate 1,2-dioxygenase CEQ50_07450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ50_07455 PF07687 Peptidase dimerisation domain CEQ50_07455 PF01546 Peptidase family M20/M25/M40 CEQ50_07470 PF01235 Sodium:alanine symporter family CEQ50_07475 PF01810 LysE type translocator CEQ50_07480 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEQ50_07485 PF07690 Major Facilitator Superfamily CEQ50_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_07490 PF03466 LysR substrate binding domain CEQ50_07500 PF00271 Helicase conserved C-terminal domain CEQ50_07500 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CEQ50_07500 PF00270 DEAD/DEAH box helicase CEQ50_07500 PF04408 Helicase associated domain (HA2) CEQ50_07500 PF11898 Domain of unknown function (DUF3418) CEQ50_07520 PF17158 Membrane-associated sensor, integral membrane domain CEQ50_07520 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_07530 PF00012 Hsp70 protein CEQ50_07535 PF00012 Hsp70 protein CEQ50_07540 PF00465 Iron-containing alcohol dehydrogenase CEQ50_07555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEQ50_07555 PF00703 Glycosyl hydrolases family 2 CEQ50_07555 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CEQ50_07555 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEQ50_07565 PF00356 Bacterial regulatory proteins, lacI family CEQ50_07570 PF00232 Glycosyl hydrolase family 1 CEQ50_07575 PF00270 DEAD/DEAH box helicase CEQ50_07575 PF00271 Helicase conserved C-terminal domain CEQ50_07580 PF18364 Molybdopterin oxidoreductase N-terminal domain CEQ50_07580 PF01568 Molydopterin dinucleotide binding domain CEQ50_07580 PF00384 Molybdopterin oxidoreductase CEQ50_07585 PF03264 NapC/NirT cytochrome c family, N-terminal region CEQ50_07590 PF00313 'Cold-shock' DNA-binding domain CEQ50_07600 PF00158 Sigma-54 interaction domain CEQ50_07600 PF00072 Response regulator receiver domain CEQ50_07600 PF02954 Bacterial regulatory protein, Fis family CEQ50_07605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_07605 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_07610 PF00939 Sodium:sulfate symporter transmembrane region CEQ50_07615 PF00672 HAMP domain CEQ50_07615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07620 PF01168 Alanine racemase, N-terminal domain CEQ50_07620 PF00842 Alanine racemase, C-terminal domain CEQ50_07625 PF00892 EamA-like transporter family CEQ50_07630 PF05230 MASE2 domain CEQ50_07630 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_07640 PF13302 Acetyltransferase (GNAT) domain CEQ50_07645 PF00158 Sigma-54 interaction domain CEQ50_07645 PF18024 Helix-turn-helix domain CEQ50_07650 PF05128 Domain of unknown function (DUF697) CEQ50_07655 PF04317 YcjX-like family, DUF463 CEQ50_07670 PF04715 Anthranilate synthase component I, N terminal region CEQ50_07670 PF00425 chorismate binding enzyme CEQ50_07675 PF00293 NUDIX domain CEQ50_07680 PF03222 Tryptophan/tyrosine permease family CEQ50_07685 PF03315 Serine dehydratase beta chain CEQ50_07685 PF03313 Serine dehydratase alpha chain CEQ50_07690 PF00041 Fibronectin type III domain CEQ50_07690 PF12561 ToxR activated gene A lipoprotein domain CEQ50_07695 PF04231 Endonuclease I CEQ50_07700 PF01242 6-pyruvoyl tetrahydropterin synthase CEQ50_07705 PF17200 Single Cache domain 2 CEQ50_07705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07705 PF00672 HAMP domain CEQ50_07710 PF01336 OB-fold nucleic acid binding domain CEQ50_07710 PF00152 tRNA synthetases class II (D, K and N) CEQ50_07720 PF00072 Response regulator receiver domain CEQ50_07720 PF01339 CheB methylesterase CEQ50_07725 PF03975 CheD chemotactic sensory transduction CEQ50_07730 PF01739 CheR methyltransferase, SAM binding domain CEQ50_07730 PF03705 CheR methyltransferase, all-alpha domain CEQ50_07735 PF01584 CheW-like domain CEQ50_07740 PF00672 HAMP domain CEQ50_07740 PF12729 Four helix bundle sensory module for signal transduction CEQ50_07740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07745 PF01584 CheW-like domain CEQ50_07745 PF09078 CheY binding CEQ50_07745 PF02895 Signal transducing histidine kinase, homodimeric domain CEQ50_07745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_07745 PF01627 Hpt domain CEQ50_07755 PF00072 Response regulator receiver domain CEQ50_07760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07760 PF00672 HAMP domain CEQ50_07765 PF00672 HAMP domain CEQ50_07765 PF01966 HD domain CEQ50_07770 PF00155 Aminotransferase class I and II CEQ50_07775 PF00571 CBS domain CEQ50_07780 PF11490 DNA polymerase III polC-type N-terminus II CEQ50_07780 PF02811 PHP domain CEQ50_07780 PF14579 Helix-hairpin-helix motif CEQ50_07780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEQ50_07780 PF14480 DNA polymerase III polC-type N-terminus I CEQ50_07780 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEQ50_07780 PF00929 Exonuclease CEQ50_07785 PF02743 Cache domain CEQ50_07785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07785 PF00672 HAMP domain CEQ50_07790 PF02028 BCCT, betaine/carnitine/choline family transporter CEQ50_07795 PF01047 MarR family CEQ50_07810 PF00753 Metallo-beta-lactamase superfamily CEQ50_07815 PF05951 Bacterial protein of unknown function (DUF882) CEQ50_07820 PF03734 L,D-transpeptidase catalytic domain CEQ50_07820 PF01471 Putative peptidoglycan binding domain CEQ50_07845 PF00925 GTP cyclohydrolase II CEQ50_07850 PF00480 ROK family CEQ50_07855 PF00593 TonB dependent receptor CEQ50_07855 PF07715 TonB-dependent Receptor Plug Domain CEQ50_07860 PF01243 Pyridoxamine 5'-phosphate oxidase CEQ50_07865 PF06228 Haem utilisation ChuX/HutX CEQ50_07870 PF04055 Radical SAM superfamily CEQ50_07875 PF03544 Gram-negative bacterial TonB protein C-terminal CEQ50_07880 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_07885 PF02472 Biopolymer transport protein ExbD/TolR CEQ50_07895 PF01032 FecCD transport family CEQ50_07900 PF00005 ABC transporter CEQ50_07915 PF02743 Cache domain CEQ50_07915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07915 PF00672 HAMP domain CEQ50_07920 PF08244 Glycosyl hydrolases family 32 C terminal CEQ50_07920 PF00251 Glycosyl hydrolases family 32 N-terminal domain CEQ50_07925 PF00356 Bacterial regulatory proteins, lacI family CEQ50_07930 PF00367 phosphotransferase system, EIIB CEQ50_07930 PF02378 Phosphotransferase system, EIIC CEQ50_07935 PF00294 pfkB family carbohydrate kinase CEQ50_07940 PF12792 CSS motif domain associated with EAL CEQ50_07940 PF00563 EAL domain CEQ50_07945 PF07885 Ion channel CEQ50_07950 PF16591 Helical bimodular sensor domain CEQ50_07950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_07950 PF00672 HAMP domain CEQ50_07955 PF02322 Cytochrome bd terminal oxidase subunit II CEQ50_07960 PF01654 Cytochrome bd terminal oxidase subunit I CEQ50_07985 PF05114 Protein of unknown function (DUF692) CEQ50_08000 PF01654 Cytochrome bd terminal oxidase subunit I CEQ50_08005 PF02322 Cytochrome bd terminal oxidase subunit II CEQ50_08015 PF01042 Endoribonuclease L-PSP CEQ50_08050 PF01527 Transposase CEQ50_08075 PF00486 Transcriptional regulatory protein, C terminal CEQ50_08100 PF00069 Protein kinase domain CEQ50_08100 PF08239 Bacterial SH3 domain CEQ50_08125 PF16697 Inner membrane component of T3SS, cytoplasmic domain CEQ50_08145 PF07478 D-ala D-ala ligase C-terminus CEQ50_08150 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ50_08150 PF17871 AAA lid domain CEQ50_08150 PF07724 AAA domain (Cdc48 subfamily) CEQ50_08150 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_08195 PF04717 Type VI secretion system, phage-baseplate injector CEQ50_08195 PF16671 Actin cross-linking domain CEQ50_08220 PF00589 Phage integrase family CEQ50_08220 PF02899 Phage integrase, N-terminal SAM-like domain CEQ50_08245 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_08245 PF00072 Response regulator receiver domain CEQ50_08255 PF18494 Pullulanase Ins domain CEQ50_08255 PF03714 Bacterial pullanase-associated domain CEQ50_08255 PF17967 Pullulanase N2 domain CEQ50_08255 PF11852 Domain of unknown function (DUF3372) CEQ50_08255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEQ50_08260 PF01584 CheW-like domain CEQ50_08260 PF00072 Response regulator receiver domain CEQ50_08270 PF00072 Response regulator receiver domain CEQ50_08270 PF12431 Transcriptional regulator CEQ50_08275 PF00989 PAS fold CEQ50_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_08275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CEQ50_08275 PF17203 Single cache domain 3 CEQ50_08290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_08310 PF04204 Homoserine O-succinyltransferase CEQ50_08325 PF05971 RNA methyltransferase CEQ50_08330 PF01863 Protein of unknown function DUF45 CEQ50_08340 PF03466 LysR substrate binding domain CEQ50_08340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_08360 PF01797 Transposase IS200 like CEQ50_08375 PF01032 FecCD transport family CEQ50_08380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CEQ50_08390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CEQ50_08395 PF02654 Cobalamin-5-phosphate synthase CEQ50_08415 PF02794 RTX toxin acyltransferase family CEQ50_08425 PF03412 Peptidase C39 family CEQ50_08425 PF00664 ABC transporter transmembrane region CEQ50_08425 PF00005 ABC transporter CEQ50_08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_08440 PF00672 HAMP domain CEQ50_08440 PF02743 Cache domain CEQ50_08445 PF13460 NAD(P)H-binding CEQ50_08455 PF00929 Exonuclease CEQ50_08455 PF08411 Exonuclease C-terminal CEQ50_08460 PF03788 LrgA family CEQ50_08465 PF04172 LrgB-like family CEQ50_08470 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ50_08470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ50_08475 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_08475 PF08448 PAS fold CEQ50_08475 PF08447 PAS fold CEQ50_08475 PF00563 EAL domain CEQ50_08480 PF02222 ATP-grasp domain CEQ50_08485 PF13426 PAS domain CEQ50_08485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_08485 PF08447 PAS fold CEQ50_08490 PF05724 Thiopurine S-methyltransferase (TPMT) CEQ50_08505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CEQ50_08505 PF01588 Putative tRNA binding domain CEQ50_08505 PF03147 Ferredoxin-fold anticodon binding domain CEQ50_08505 PF03484 tRNA synthetase B5 domain CEQ50_08505 PF03483 B3/4 domain CEQ50_08510 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEQ50_08510 PF01409 tRNA synthetases class II core domain (F) CEQ50_08545 PF01066 CDP-alcohol phosphatidyltransferase CEQ50_08550 PF02151 UvrB/uvrC motif CEQ50_08550 PF01541 GIY-YIG catalytic domain CEQ50_08550 PF08459 UvrC Helix-hairpin-helix N-terminal CEQ50_08555 PF00196 Bacterial regulatory proteins, luxR family CEQ50_08555 PF00072 Response regulator receiver domain CEQ50_08585 PF03050 Transposase IS66 family CEQ50_08585 PF13817 IS66 C-terminal element CEQ50_08585 PF13007 Transposase C of IS166 homeodomain CEQ50_08585 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_08610 PF03104 DNA polymerase family B, exonuclease domain CEQ50_08610 PF00136 DNA polymerase family B CEQ50_08625 PF05638 Type VI secretion system effector, Hcp CEQ50_08675 PF01132 Elongation factor P (EF-P) OB domain CEQ50_08675 PF08207 Elongation factor P (EF-P) KOW-like domain CEQ50_08675 PF09285 Elongation factor P, C-terminal CEQ50_08680 PF04269 Protein of unknown function, DUF440 CEQ50_08690 PF07702 UTRA domain CEQ50_08690 PF00392 Bacterial regulatory proteins, gntR family CEQ50_08695 PF01979 Amidohydrolase family CEQ50_08700 PF00491 Arginase family CEQ50_08705 PF17391 Urocanase N-terminal domain CEQ50_08705 PF01175 Urocanase Rossmann-like domain CEQ50_08705 PF17392 Urocanase C-terminal domain CEQ50_08710 PF00221 Aromatic amino acid lyase CEQ50_08720 PF04191 Phospholipid methyltransferase CEQ50_08725 PF01565 FAD binding domain CEQ50_08725 PF13183 4Fe-4S dicluster domain CEQ50_08725 PF02913 FAD linked oxidases, C-terminal domain CEQ50_08755 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEQ50_08755 PF07055 Enoyl reductase FAD binding domain CEQ50_08755 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEQ50_08760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEQ50_08760 PF02770 Acyl-CoA dehydrogenase, middle domain CEQ50_08760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEQ50_08760 PF09317 Domain of unknown function (DUF1974) CEQ50_08765 PF00440 Bacterial regulatory proteins, tetR family CEQ50_08765 PF16295 Tetracyclin repressor-like, C-terminal domain CEQ50_08785 PF00171 Aldehyde dehydrogenase family CEQ50_08790 PF03707 Bacterial signalling protein N terminal repeat CEQ50_08790 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_08790 PF13188 PAS domain CEQ50_08790 PF00563 EAL domain CEQ50_08810 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_08810 PF03050 Transposase IS66 family CEQ50_08810 PF13817 IS66 C-terminal element CEQ50_08810 PF13007 Transposase C of IS166 homeodomain CEQ50_08830 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CEQ50_08830 PF18766 SWI2/SNF2 ATPase CEQ50_08830 PF11867 Domain of unknown function (DUF3387) CEQ50_08840 PF12161 HsdM N-terminal domain CEQ50_08840 PF02384 N-6 DNA Methylase CEQ50_08850 PF02384 N-6 DNA Methylase CEQ50_08870 PF00293 NUDIX domain CEQ50_08940 PF04002 RadC-like JAB domain CEQ50_08955 PF00075 RNase H CEQ50_08995 PF00589 Phage integrase family CEQ50_08995 PF13356 Arm DNA-binding domain CEQ50_09005 PF06610 L-alanine exporter CEQ50_09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_09010 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_09010 PF09308 LuxQ, periplasmic CEQ50_09010 PF00072 Response regulator receiver domain CEQ50_09020 PF02445 Quinolinate synthetase A protein CEQ50_09025 PF16331 TolA binding protein trimerisation CEQ50_09025 PF13525 Outer membrane lipoprotein CEQ50_09030 PF00691 OmpA family CEQ50_09045 PF02472 Biopolymer transport protein ExbD/TolR CEQ50_09050 PF01618 MotA/TolQ/ExbB proton channel family CEQ50_09055 PF03061 Thioesterase superfamily CEQ50_09060 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CEQ50_09065 PF08173 Membrane bound YbgT-like protein CEQ50_09070 PF02322 Cytochrome bd terminal oxidase subunit II CEQ50_09075 PF01654 Cytochrome bd terminal oxidase subunit I CEQ50_09080 PF05491 RuvB C-terminal winged helix domain CEQ50_09080 PF17864 RuvB AAA lid domain CEQ50_09080 PF05496 Holliday junction DNA helicase RuvB P-loop domain CEQ50_09085 PF07499 RuvA, C-terminal domain CEQ50_09085 PF01330 RuvA N terminal domain CEQ50_09090 PF02075 Crossover junction endodeoxyribonuclease RuvC CEQ50_09095 PF09190 DALR domain CEQ50_09095 PF01406 tRNA synthetases class I (C) catalytic domain CEQ50_09100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEQ50_09105 PF00149 Calcineurin-like phosphoesterase CEQ50_09110 PF00563 EAL domain CEQ50_09110 PF08668 HDOD domain CEQ50_09115 PF02810 SEC-C motif CEQ50_09125 PF06733 DEAD_2 CEQ50_09125 PF13307 Helicase C-terminal domain CEQ50_09130 PF01925 Sulfite exporter TauE/SafE CEQ50_09135 PF07445 Primosomal replication protein priC CEQ50_09140 PF10689 Protein of unknown function (DUF2496) CEQ50_09145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_09145 PF00672 HAMP domain CEQ50_09150 PF03372 Endonuclease/Exonuclease/phosphatase family CEQ50_09155 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_09160 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_09165 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_09170 PF00005 ABC transporter CEQ50_09185 PF01228 Glycine radical CEQ50_09185 PF02901 Pyruvate formate lyase-like CEQ50_09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_09195 PF00672 HAMP domain CEQ50_09200 PF04055 Radical SAM superfamily CEQ50_09215 PF06798 PrkA serine protein kinase C-terminal domain CEQ50_09215 PF08298 PrkA AAA domain CEQ50_09220 PF04285 Protein of unknown function (DUF444) CEQ50_09225 PF04293 SpoVR like protein CEQ50_09230 PF01292 Prokaryotic cytochrome b561 CEQ50_09235 PF02348 Cytidylyltransferase CEQ50_09240 PF03966 Trm112p-like protein CEQ50_09245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEQ50_09250 PF00005 ABC transporter CEQ50_09250 PF00664 ABC transporter transmembrane region CEQ50_09255 PF00753 Metallo-beta-lactamase superfamily CEQ50_09255 PF03772 Competence protein CEQ50_09255 PF13567 Domain of unknown function (DUF4131) CEQ50_09265 PF02687 FtsX-like permease family CEQ50_09265 PF12704 MacB-like periplasmic core domain CEQ50_09270 PF00005 ABC transporter CEQ50_09275 PF02687 FtsX-like permease family CEQ50_09275 PF12704 MacB-like periplasmic core domain CEQ50_09285 PF00270 DEAD/DEAH box helicase CEQ50_09285 PF17757 UvrB interaction domain CEQ50_09285 PF03461 TRCF domain CEQ50_09285 PF02559 CarD-like/TRCF domain CEQ50_09285 PF00271 Helicase conserved C-terminal domain CEQ50_09295 PF12563 Hemolytic toxin N terminal CEQ50_09295 PF07968 Leukocidin/Hemolysin toxin family CEQ50_09295 PF16458 Beta-prism lectin CEQ50_09300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_09315 PF13036 Peptidoglycan-synthase activator LpoB CEQ50_09315 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CEQ50_09330 PF01230 HIT domain CEQ50_09335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_09335 PF00672 HAMP domain CEQ50_09345 PF00392 Bacterial regulatory proteins, gntR family CEQ50_09345 PF07840 FadR C-terminal domain CEQ50_09350 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CEQ50_09355 PF02600 Disulfide bond formation protein DsbB CEQ50_09365 PF08241 Methyltransferase domain CEQ50_09370 PF00155 Aminotransferase class I and II CEQ50_09375 PF06968 Biotin and Thiamin Synthesis associated domain CEQ50_09375 PF04055 Radical SAM superfamily CEQ50_09380 PF00202 Aminotransferase class-III CEQ50_09385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEQ50_09385 PF02403 Seryl-tRNA synthetase N-terminal domain CEQ50_09390 PF12002 MgsA AAA+ ATPase C terminal CEQ50_09390 PF16193 AAA C-terminal domain CEQ50_09390 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_09395 PF03548 Outer membrane lipoprotein carrier protein LolA CEQ50_09400 PF01043 SecA preprotein cross-linking domain CEQ50_09400 PF07516 SecA Wing and Scaffold domain CEQ50_09400 PF07517 SecA DEAD-like domain CEQ50_09400 PF02810 SEC-C motif CEQ50_09405 PF01207 Dihydrouridine synthase (Dus) CEQ50_09410 PF00005 ABC transporter CEQ50_09415 PF02653 Branched-chain amino acid transport system / permease component CEQ50_09425 PF04217 Protein of unknown function, DUF412 CEQ50_09430 PF00871 Acetokinase family CEQ50_09435 PF01515 Phosphate acetyl/butaryl transferase CEQ50_09435 PF07085 DRTGG domain CEQ50_09440 PF13409 Glutathione S-transferase, N-terminal domain CEQ50_09445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_09445 PF00005 ABC transporter CEQ50_09450 PF00005 ABC transporter CEQ50_09450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_09455 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ50_09455 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_09460 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_09465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ50_09470 PF00563 EAL domain CEQ50_09470 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_09470 PF03707 Bacterial signalling protein N terminal repeat CEQ50_09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_09475 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_09475 PF09308 LuxQ, periplasmic CEQ50_09475 PF00072 Response regulator receiver domain CEQ50_09480 PF04820 Tryptophan halogenase CEQ50_09500 PF00550 Phosphopantetheine attachment site CEQ50_09505 PF00550 Phosphopantetheine attachment site CEQ50_09515 PF13193 AMP-binding enzyme C-terminal domain CEQ50_09515 PF00501 AMP-binding enzyme CEQ50_09525 PF00535 Glycosyl transferase family 2 CEQ50_09530 PF00221 Aromatic amino acid lyase CEQ50_09555 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ50_09555 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ50_09560 PF07977 FabA-like domain CEQ50_09570 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ50_09570 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ50_09580 PF00857 Isochorismatase family CEQ50_09585 PF12833 Helix-turn-helix domain CEQ50_09585 PF02311 AraC-like ligand binding domain CEQ50_09595 PF02321 Outer membrane efflux protein CEQ50_09600 PF00529 HlyD membrane-fusion protein of T1SS CEQ50_09600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_09605 PF07690 Major Facilitator Superfamily CEQ50_09615 PF01081 KDPG and KHG aldolase CEQ50_09620 PF02447 GntP family permease CEQ50_09625 PF01202 Shikimate kinase CEQ50_09630 PF00920 Dehydratase family CEQ50_09635 PF00356 Bacterial regulatory proteins, lacI family CEQ50_09635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ50_09650 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_09650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_09650 PF00672 HAMP domain CEQ50_09655 PF00072 Response regulator receiver domain CEQ50_09655 PF00486 Transcriptional regulatory protein, C terminal CEQ50_09660 PF02080 TrkA-C domain CEQ50_09660 PF06826 Predicted Permease Membrane Region CEQ50_09665 PF01810 LysE type translocator CEQ50_09670 PF01037 Lrp/AsnC ligand binding domain CEQ50_09675 PF00884 Sulfatase CEQ50_09675 PF08019 Phosphoethanolamine transferase EptA/EptB CEQ50_09680 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_09680 PF08521 Two-component sensor kinase N-terminal CEQ50_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_09685 PF00072 Response regulator receiver domain CEQ50_09685 PF00486 Transcriptional regulatory protein, C terminal CEQ50_09705 PF00501 AMP-binding enzyme CEQ50_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_09720 PF03466 LysR substrate binding domain CEQ50_09730 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_09740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEQ50_09745 PF09619 Type III secretion system lipoprotein chaperone (YscW) CEQ50_09755 PF01037 Lrp/AsnC ligand binding domain CEQ50_09755 PF13404 AsnC-type helix-turn-helix domain CEQ50_09760 PF00291 Pyridoxal-phosphate dependent enzyme CEQ50_09775 PF07690 Major Facilitator Superfamily CEQ50_09790 PF00501 AMP-binding enzyme CEQ50_09795 PF13378 Enolase C-terminal domain-like CEQ50_09800 PF00378 Enoyl-CoA hydratase/isomerase CEQ50_09805 PF12697 Alpha/beta hydrolase family CEQ50_09810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ50_09810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ50_09810 PF16582 Middle domain of thiamine pyrophosphate CEQ50_09825 PF00155 Aminotransferase class I and II CEQ50_09835 PF01966 HD domain CEQ50_09835 PF13286 Phosphohydrolase-associated domain CEQ50_09850 PF01343 Peptidase family S49 CEQ50_09850 PF08496 Peptidase family S49 N-terminal CEQ50_09855 PF00106 short chain dehydrogenase CEQ50_09860 PF00072 Response regulator receiver domain CEQ50_09860 PF01584 CheW-like domain CEQ50_09865 PF00480 ROK family CEQ50_09870 PF02887 Pyruvate kinase, alpha/beta domain CEQ50_09870 PF00224 Pyruvate kinase, barrel domain CEQ50_09875 PF01734 Patatin-like phospholipase CEQ50_09885 PF00209 Sodium:neurotransmitter symporter family CEQ50_09895 PF02378 Phosphotransferase system, EIIC CEQ50_09895 PF00367 phosphotransferase system, EIIB CEQ50_09900 PF01026 TatD related DNase CEQ50_09905 PF09115 DNA polymerase III, delta subunit, C terminal CEQ50_09910 PF02223 Thymidylate kinase CEQ50_09915 PF02618 YceG-like family CEQ50_09920 PF01063 Amino-transferase class IV CEQ50_09925 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ50_09925 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ50_09930 PF00550 Phosphopantetheine attachment site CEQ50_09940 PF00698 Acyl transferase domain CEQ50_09945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEQ50_09945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEQ50_09950 PF02504 Fatty acid synthesis protein CEQ50_09955 PF01783 Ribosomal L32p protein family CEQ50_09960 PF02620 Large ribosomal RNA subunit accumulation protein YceD CEQ50_09965 PF02545 Maf-like protein CEQ50_09970 PF00849 RNA pseudouridylate synthase CEQ50_09970 PF01479 S4 domain CEQ50_09975 PF00575 S1 RNA binding domain CEQ50_09975 PF10150 Ribonuclease E/G family CEQ50_09975 PF12111 Polyribonucleotide phosphorylase C terminal CEQ50_09985 PF00465 Iron-containing alcohol dehydrogenase CEQ50_09985 PF00171 Aldehyde dehydrogenase family CEQ50_09990 PF01914 MarC family integral membrane protein CEQ50_09995 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEQ50_09995 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEQ50_10010 PF04245 37-kD nucleoid-associated bacterial protein CEQ50_10015 PF07208 Protein of unknown function (DUF1414) CEQ50_10020 PF11893 Domain of unknown function (DUF3413) CEQ50_10020 PF00884 Sulfatase CEQ50_10030 PF00384 Molybdopterin oxidoreductase CEQ50_10035 PF02634 FdhD/NarQ family CEQ50_10055 PF01751 Toprim domain CEQ50_10055 PF01131 DNA topoisomerase CEQ50_10060 PF00462 Glutaredoxin CEQ50_10065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEQ50_10065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEQ50_10080 PF04333 MlaA lipoprotein CEQ50_10090 PF03918 Cytochrome C biogenesis protein CEQ50_10095 PF08534 Redoxin CEQ50_10100 PF01578 Cytochrome C assembly protein CEQ50_10100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CEQ50_10105 PF03100 CcmE CEQ50_10115 PF01578 Cytochrome C assembly protein CEQ50_10120 PF03379 CcmB protein CEQ50_10125 PF00005 ABC transporter CEQ50_10135 PF01584 CheW-like domain CEQ50_10145 PF13614 AAA domain CEQ50_10150 PF00072 Response regulator receiver domain CEQ50_10150 PF01339 CheB methylesterase CEQ50_10155 PF01584 CheW-like domain CEQ50_10155 PF02895 Signal transducing histidine kinase, homodimeric domain CEQ50_10155 PF01627 Hpt domain CEQ50_10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_10155 PF07194 P2 response regulator binding domain CEQ50_10160 PF04344 Chemotaxis phosphatase, CheZ CEQ50_10165 PF00072 Response regulator receiver domain CEQ50_10170 PF04545 Sigma-70, region 4 CEQ50_10170 PF04539 Sigma-70 region 3 CEQ50_10170 PF04542 Sigma-70 region 2 CEQ50_10175 PF10609 NUBPL iron-transfer P-loop NTPase CEQ50_10180 PF00448 SRP54-type protein, GTPase domain CEQ50_10185 PF00771 FHIPEP family CEQ50_10190 PF00300 Histidine phosphatase superfamily (branch 1) CEQ50_10195 PF00675 Insulinase (Peptidase family M16) CEQ50_10195 PF05193 Peptidase M16 inactive domain CEQ50_10200 PF06185 YecM protein CEQ50_10205 PF05746 DALR anticodon binding domain CEQ50_10205 PF00750 tRNA synthetases class I (R) CEQ50_10205 PF03485 Arginyl tRNA synthetase N terminal domain CEQ50_10220 PF07664 Ferrous iron transport protein B C terminus CEQ50_10220 PF02421 Ferrous iron transport protein B CEQ50_10220 PF07670 Nucleoside recognition CEQ50_10225 PF04023 FeoA domain CEQ50_10230 PF02311 AraC-like ligand binding domain CEQ50_10230 PF12833 Helix-turn-helix domain CEQ50_10235 PF01297 Zinc-uptake complex component A periplasmic CEQ50_10240 PF00005 ABC transporter CEQ50_10245 PF00950 ABC 3 transport family CEQ50_10250 PF02629 CoA binding domain CEQ50_10250 PF00549 CoA-ligase CEQ50_10255 PF08442 ATP-grasp domain CEQ50_10255 PF00549 CoA-ligase CEQ50_10260 PF02817 e3 binding domain CEQ50_10260 PF00364 Biotin-requiring enzyme CEQ50_10260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEQ50_10265 PF02779 Transketolase, pyrimidine binding domain CEQ50_10265 PF16870 2-oxoglutarate dehydrogenase C-terminal CEQ50_10265 PF00676 Dehydrogenase E1 component CEQ50_10265 PF16078 2-oxoglutarate dehydrogenase N-terminus CEQ50_10270 PF13085 2Fe-2S iron-sulfur cluster binding domain CEQ50_10275 PF02910 Fumarate reductase flavoprotein C-term CEQ50_10275 PF00890 FAD binding domain CEQ50_10280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEQ50_10285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEQ50_10290 PF00285 Citrate synthase, C-terminal domain CEQ50_10295 PF01784 NIF3 (NGG1p interacting factor 3) CEQ50_10305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ50_10305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ50_10305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ50_10305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ50_10310 PF03925 SeqA protein C-terminal domain CEQ50_10310 PF17206 SeqA protein N-terminal domain CEQ50_10315 PF12697 Alpha/beta hydrolase family CEQ50_10325 PF00258 Flavodoxin CEQ50_10330 PF04172 LrgB-like family CEQ50_10335 PF03788 LrgA family CEQ50_10340 PF03466 LysR substrate binding domain CEQ50_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_10350 PF01475 Ferric uptake regulator family CEQ50_10355 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEQ50_10355 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEQ50_10360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ50_10360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ50_10360 PF11890 Domain of unknown function (DUF3410) CEQ50_10365 PF00109 Beta-ketoacyl synthase, N-terminal domain CEQ50_10365 PF02801 Beta-ketoacyl synthase, C-terminal domain CEQ50_10370 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEQ50_10370 PF01266 FAD dependent oxidoreductase CEQ50_10375 PF03358 NADPH-dependent FMN reductase CEQ50_10380 PF08891 YfcL protein CEQ50_10385 PF04315 Elongation factor P hydroxylase CEQ50_10390 PF03458 UPF0126 domain CEQ50_10395 PF01264 Chorismate synthase CEQ50_10400 PF05175 Methyltransferase small domain CEQ50_10405 PF01713 Smr domain CEQ50_10410 PF01312 FlhB HrpN YscU SpaS Family CEQ50_10415 PF01311 Bacterial export proteins, family 1 CEQ50_10420 PF01313 Bacterial export proteins, family 3 CEQ50_10425 PF00813 FliP family CEQ50_10430 PF04347 Flagellar biosynthesis protein, FliO CEQ50_10435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEQ50_10440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEQ50_10440 PF02154 Flagellar motor switch protein FliM CEQ50_10460 PF18269 T3SS EscN ATPase C-terminal domain CEQ50_10460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ50_10470 PF14842 FliG N-terminal domain CEQ50_10470 PF01706 FliG C-terminal domain CEQ50_10470 PF14841 FliG middle domain CEQ50_10475 PF01514 Secretory protein of YscJ/FliF family CEQ50_10475 PF08345 Flagellar M-ring protein C-terminal CEQ50_10480 PF02049 Flagellar hook-basal body complex protein FliE CEQ50_10485 PF00072 Response regulator receiver domain CEQ50_10485 PF00158 Sigma-54 interaction domain CEQ50_10485 PF02954 Bacterial regulatory protein, Fis family CEQ50_10490 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_10495 PF00072 Response regulator receiver domain CEQ50_10495 PF02954 Bacterial regulatory protein, Fis family CEQ50_10495 PF00158 Sigma-54 interaction domain CEQ50_10500 PF02561 Flagellar protein FliS CEQ50_10510 PF02465 Flagellar hook-associated protein 2 N-terminus CEQ50_10510 PF07196 Flagellin hook IN motif CEQ50_10510 PF07195 Flagellar hook-associated protein 2 C-terminus CEQ50_10515 PF03646 FlaG protein CEQ50_10520 PF00700 Bacterial flagellin C-terminal helical region CEQ50_10520 PF07196 Flagellin hook IN motif CEQ50_10520 PF00669 Bacterial flagellin N-terminal helical region CEQ50_10525 PF07196 Flagellin hook IN motif CEQ50_10525 PF00669 Bacterial flagellin N-terminal helical region CEQ50_10525 PF00700 Bacterial flagellin C-terminal helical region CEQ50_10530 PF00669 Bacterial flagellin N-terminal helical region CEQ50_10530 PF07196 Flagellin hook IN motif CEQ50_10530 PF00700 Bacterial flagellin C-terminal helical region CEQ50_10535 PF04261 Dyp-type peroxidase family CEQ50_10540 PF11143 Protein of unknown function (DUF2919) CEQ50_10560 PF03960 ArsC family CEQ50_10565 PF01546 Peptidase family M20/M25/M40 CEQ50_10565 PF07687 Peptidase dimerisation domain CEQ50_10585 PF00701 Dihydrodipicolinate synthetase family CEQ50_10595 PF00578 AhpC/TSA family CEQ50_10600 PF00672 HAMP domain CEQ50_10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_10600 PF02743 Cache domain CEQ50_10605 PF01594 AI-2E family transporter CEQ50_10615 PF01435 Peptidase family M48 CEQ50_10615 PF13181 Tetratricopeptide repeat CEQ50_10620 PF03960 ArsC family CEQ50_10625 PF03358 NADPH-dependent FMN reductase CEQ50_10640 PF00860 Permease family CEQ50_10645 PF04073 Aminoacyl-tRNA editing domain CEQ50_10650 PF00149 Calcineurin-like phosphoesterase CEQ50_10650 PF02872 5'-nucleotidase, C-terminal domain CEQ50_10655 PF00793 DAHP synthetase I family CEQ50_10660 PF13369 Transglutaminase-like superfamily CEQ50_10665 PF04247 Invasion gene expression up-regulator, SirB CEQ50_10670 PF13847 Methyltransferase domain CEQ50_10670 PF17827 PrmC N-terminal domain CEQ50_10675 PF00472 RF-1 domain CEQ50_10675 PF03462 PCRF domain CEQ50_10680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CEQ50_10680 PF01488 Shikimate / quinate 5-dehydrogenase CEQ50_10680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CEQ50_10685 PF03550 Outer membrane lipoprotein LolB CEQ50_10690 PF00288 GHMP kinases N terminal domain CEQ50_10690 PF08544 GHMP kinases C terminal CEQ50_10695 PF14572 Phosphoribosyl synthetase-associated domain CEQ50_10695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEQ50_10700 PF01195 Peptidyl-tRNA hydrolase CEQ50_10705 PF01926 50S ribosome-binding GTPase CEQ50_10705 PF06071 Protein of unknown function (DUF933) CEQ50_10790 PF00669 Bacterial flagellin N-terminal helical region CEQ50_10790 PF07196 Flagellin hook IN motif CEQ50_10790 PF00700 Bacterial flagellin C-terminal helical region CEQ50_10795 PF00700 Bacterial flagellin C-terminal helical region CEQ50_10795 PF07196 Flagellin hook IN motif CEQ50_10795 PF00669 Bacterial flagellin N-terminal helical region CEQ50_10805 PF00669 Bacterial flagellin N-terminal helical region CEQ50_10810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ50_10810 PF07196 Flagellin hook IN motif CEQ50_10815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEQ50_10815 PF10135 Rod binding protein CEQ50_10820 PF02119 Flagellar P-ring protein CEQ50_10825 PF02107 Flagellar L-ring protein CEQ50_10830 PF00460 Flagella basal body rod protein CEQ50_10830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ50_10835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ50_10835 PF00460 Flagella basal body rod protein CEQ50_10840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ50_10840 PF00460 Flagella basal body rod protein CEQ50_10840 PF07559 Flagellar basal body protein FlaE CEQ50_10845 PF13861 FlgD Tudor-like domain CEQ50_10845 PF13860 FlgD Ig-like domain CEQ50_10845 PF03963 Flagellar hook capping protein - N-terminal region CEQ50_10850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEQ50_10850 PF00460 Flagella basal body rod protein CEQ50_10855 PF00460 Flagella basal body rod protein CEQ50_10860 PF03705 CheR methyltransferase, all-alpha domain CEQ50_10860 PF01739 CheR methyltransferase, SAM binding domain CEQ50_10865 PF00072 Response regulator receiver domain CEQ50_10865 PF01584 CheW-like domain CEQ50_10875 PF04316 Anti-sigma-28 factor, FlgM CEQ50_10910 PF00691 OmpA family CEQ50_10910 PF01389 OmpA-like transmembrane domain CEQ50_10915 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEQ50_10920 PF00403 Heavy-metal-associated domain CEQ50_10930 PF02838 Glycosyl hydrolase family 20, domain 2 CEQ50_10930 PF00728 Glycosyl hydrolase family 20, catalytic domain CEQ50_10930 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CEQ50_10930 PF03173 Putative carbohydrate binding domain CEQ50_10945 PF01479 S4 domain CEQ50_10945 PF00849 RNA pseudouridylate synthase CEQ50_10955 PF02769 AIR synthase related protein, C-terminal domain CEQ50_10955 PF00586 AIR synthase related protein, N-terminal domain CEQ50_10960 PF00551 Formyl transferase CEQ50_10965 PF13230 Glutamine amidotransferases class-II CEQ50_10970 PF13580 SIS domain CEQ50_10975 PF09317 Domain of unknown function (DUF1974) CEQ50_10975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEQ50_10975 PF02770 Acyl-CoA dehydrogenase, middle domain CEQ50_10975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEQ50_10985 PF00929 Exonuclease CEQ50_10990 PF00075 RNase H CEQ50_10995 PF08241 Methyltransferase domain CEQ50_11000 PF00753 Metallo-beta-lactamase superfamily CEQ50_11000 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEQ50_11005 PF01464 Transglycosylase SLT domain CEQ50_11005 PF01476 LysM domain CEQ50_11015 PF03372 Endonuclease/Exonuclease/phosphatase family CEQ50_11020 PF00543 Nitrogen regulatory protein P-II CEQ50_11025 PF00034 Cytochrome c CEQ50_11030 PF01171 PP-loop family CEQ50_11030 PF09179 TilS substrate binding domain CEQ50_11030 PF11734 TilS substrate C-terminal domain CEQ50_11035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEQ50_11040 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEQ50_11040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEQ50_11040 PF14579 Helix-hairpin-helix motif CEQ50_11040 PF02811 PHP domain CEQ50_11040 PF01336 OB-fold nucleic acid binding domain CEQ50_11045 PF01351 Ribonuclease HII CEQ50_11050 PF02684 Lipid-A-disaccharide synthetase CEQ50_11055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEQ50_11055 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_11060 PF07977 FabA-like domain CEQ50_11065 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_11065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEQ50_11070 PF03938 Outer membrane protein (OmpH-like) CEQ50_11075 PF01103 Surface antigen CEQ50_11075 PF07244 Surface antigen variable number repeat CEQ50_11080 PF02163 Peptidase family M50 CEQ50_11080 PF17820 PDZ domain CEQ50_11085 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEQ50_11085 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CEQ50_11085 PF13288 DXP reductoisomerase C-terminal domain CEQ50_11095 PF01255 Putative undecaprenyl diphosphate synthase CEQ50_11100 PF01765 Ribosome recycling factor CEQ50_11105 PF00696 Amino acid kinase family CEQ50_11110 PF00889 Elongation factor TS CEQ50_11115 PF00318 Ribosomal protein S2 CEQ50_11120 PF00557 Metallopeptidase family M24 CEQ50_11130 PF11944 Protein of unknown function (DUF3461) CEQ50_11135 PF04608 Phosphatidylglycerophosphatase A CEQ50_11140 PF02769 AIR synthase related protein, C-terminal domain CEQ50_11140 PF00586 AIR synthase related protein, N-terminal domain CEQ50_11150 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEQ50_11155 PF00925 GTP cyclohydrolase II CEQ50_11155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEQ50_11160 PF00677 Lumazine binding domain CEQ50_11165 PF01872 RibD C-terminal domain CEQ50_11165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ50_11170 PF03477 ATP cone domain CEQ50_11175 PF00171 Aldehyde dehydrogenase family CEQ50_11180 PF00696 Amino acid kinase family CEQ50_11180 PF01472 PUA domain CEQ50_11185 PF07417 Sigma factor-binding transcriptional regulator Crl CEQ50_11200 PF00860 Permease family CEQ50_11205 PF07687 Peptidase dimerisation domain CEQ50_11205 PF01546 Peptidase family M20/M25/M40 CEQ50_11210 PF08443 RimK-like ATP-grasp domain CEQ50_11210 PF18030 RimK PreATP-grasp domain CEQ50_11215 PF08443 RimK-like ATP-grasp domain CEQ50_11215 PF18030 RimK PreATP-grasp domain CEQ50_11225 PF00209 Sodium:neurotransmitter symporter family CEQ50_11255 PF11798 IMS family HHH motif CEQ50_11255 PF11799 impB/mucB/samB family C-terminal domain CEQ50_11255 PF00817 impB/mucB/samB family CEQ50_11265 PF02424 ApbE family CEQ50_11270 PF00175 Oxidoreductase NAD-binding domain CEQ50_11270 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ50_11270 PF00970 Oxidoreductase FAD-binding domain CEQ50_11275 PF02508 Rnf-Nqr subunit, membrane protein CEQ50_11280 PF02508 Rnf-Nqr subunit, membrane protein CEQ50_11285 PF04205 FMN-binding domain CEQ50_11290 PF03116 NQR2, RnfD, RnfE family CEQ50_11295 PF11973 NQRA C-terminal domain CEQ50_11295 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CEQ50_11300 PF01722 BolA-like protein CEQ50_11305 PF05175 Methyltransferase small domain CEQ50_11315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEQ50_11320 PF07690 Major Facilitator Superfamily CEQ50_11330 PF04545 Sigma-70, region 4 CEQ50_11330 PF04542 Sigma-70 region 2 CEQ50_11345 PF02558 Ketopantoate reductase PanE/ApbA CEQ50_11345 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEQ50_11350 PF01965 DJ-1/PfpI family CEQ50_11355 PF00266 Aminotransferase class-V CEQ50_11360 PF02657 Fe-S metabolism associated domain CEQ50_11365 PF00899 ThiF family CEQ50_11370 PF06725 3D domain CEQ50_11370 PF03562 MltA specific insert domain CEQ50_11380 PF00583 Acetyltransferase (GNAT) family CEQ50_11380 PF00696 Amino acid kinase family CEQ50_11390 PF13538 UvrD-like helicase C-terminal domain CEQ50_11395 PF00580 UvrD/REP helicase N-terminal domain CEQ50_11395 PF12705 PD-(D/E)XK nuclease superfamily CEQ50_11395 PF13361 UvrD-like helicase C-terminal domain CEQ50_11400 PF17946 RecC C-terminal domain CEQ50_11415 PF07130 YebG protein CEQ50_11420 PF14602 Hexapeptide repeat of succinyl-transferase CEQ50_11420 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CEQ50_11430 PF00583 Acetyltransferase (GNAT) family CEQ50_11440 PF01544 CorA-like Mg2+ transporter protein CEQ50_11450 PF00356 Bacterial regulatory proteins, lacI family CEQ50_11455 PF00288 GHMP kinases N terminal domain CEQ50_11455 PF08544 GHMP kinases C terminal CEQ50_11455 PF10509 Galactokinase galactose-binding signature CEQ50_11460 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CEQ50_11460 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CEQ50_11465 PF16363 GDP-mannose 4,6 dehydratase CEQ50_11470 PF01554 MatE CEQ50_11480 PF11849 Domain of unknown function (DUF3369) CEQ50_11485 PF00501 AMP-binding enzyme CEQ50_11490 PF09905 DNA-binding protein VF530 CEQ50_11495 PF03144 Elongation factor Tu domain 2 CEQ50_11495 PF00009 Elongation factor Tu GTP binding domain CEQ50_11495 PF00679 Elongation factor G C-terminus CEQ50_11495 PF03764 Elongation factor G, domain IV CEQ50_11495 PF14492 Elongation Factor G, domain II CEQ50_11500 PF18073 Rubredoxin metal binding domain CEQ50_11510 PF18429 Domain of unknown function (DUF5609) CEQ50_11520 PF01048 Phosphorylase superfamily CEQ50_11525 PF01676 Metalloenzyme superfamily CEQ50_11530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEQ50_11530 PF00591 Glycosyl transferase family, a/b domain CEQ50_11530 PF02885 Glycosyl transferase family, helical bundle domain CEQ50_11535 PF01791 DeoC/LacD family aldolase CEQ50_11540 PF01773 Na+ dependent nucleoside transporter N-terminus CEQ50_11540 PF07670 Nucleoside recognition CEQ50_11540 PF07662 Na+ dependent nucleoside transporter C-terminus CEQ50_11545 PF01026 TatD related DNase CEQ50_11555 PF01235 Sodium:alanine symporter family CEQ50_11570 PF03167 Uracil DNA glycosylase superfamily CEQ50_11575 PF01261 Xylose isomerase-like TIM barrel CEQ50_11580 PF01228 Glycine radical CEQ50_11585 PF00291 Pyridoxal-phosphate dependent enzyme CEQ50_11585 PF14821 Threonine synthase N terminus CEQ50_11590 PF08544 GHMP kinases C terminal CEQ50_11590 PF00288 GHMP kinases N terminal domain CEQ50_11595 PF00696 Amino acid kinase family CEQ50_11595 PF03447 Homoserine dehydrogenase, NAD binding domain CEQ50_11595 PF01842 ACT domain CEQ50_11595 PF13840 ACT domain CEQ50_11595 PF00742 Homoserine dehydrogenase CEQ50_11605 PF03737 Aldolase/RraA CEQ50_11610 PF00486 Transcriptional regulatory protein, C terminal CEQ50_11610 PF00072 Response regulator receiver domain CEQ50_11620 PF00072 Response regulator receiver domain CEQ50_11620 PF00989 PAS fold CEQ50_11620 PF01627 Hpt domain CEQ50_11620 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_11620 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEQ50_11620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_11625 PF04055 Radical SAM superfamily CEQ50_11625 PF16199 Radical_SAM C-terminal domain CEQ50_11635 PF01493 GXGXG motif CEQ50_11635 PF00310 Glutamine amidotransferases class-II CEQ50_11635 PF04898 Glutamate synthase central domain CEQ50_11635 PF01645 Conserved region in glutamate synthase CEQ50_11640 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_11640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEQ50_11645 PF01645 Conserved region in glutamate synthase CEQ50_11645 PF00310 Glutamine amidotransferases class-II CEQ50_11645 PF01493 GXGXG motif CEQ50_11645 PF04898 Glutamate synthase central domain CEQ50_11650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_11650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEQ50_11675 PF01497 Periplasmic binding protein CEQ50_11680 PF03458 UPF0126 domain CEQ50_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_11685 PF03466 LysR substrate binding domain CEQ50_11690 PF01925 Sulfite exporter TauE/SafE CEQ50_11695 PF02142 MGS-like domain CEQ50_11695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEQ50_11695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEQ50_11700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEQ50_11700 PF00117 Glutamine amidotransferase class-I CEQ50_11710 PF00293 NUDIX domain CEQ50_11715 PF01797 Transposase IS200 like CEQ50_11725 PF02810 SEC-C motif CEQ50_11725 PF07517 SecA DEAD-like domain CEQ50_11725 PF01043 SecA preprotein cross-linking domain CEQ50_11725 PF07516 SecA Wing and Scaffold domain CEQ50_11735 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEQ50_11740 PF00091 Tubulin/FtsZ family, GTPase domain CEQ50_11740 PF12327 FtsZ family, C-terminal domain CEQ50_11745 PF02491 SHS2 domain inserted in FTSA CEQ50_11750 PF08478 POTRA domain, FtsQ-type CEQ50_11750 PF03799 Cell division protein FtsQ CEQ50_11755 PF08245 Mur ligase middle domain CEQ50_11755 PF02875 Mur ligase family, glutamate ligase domain CEQ50_11755 PF01225 Mur ligase family, catalytic domain CEQ50_11760 PF04101 Glycosyltransferase family 28 C-terminal domain CEQ50_11760 PF03033 Glycosyltransferase family 28 N-terminal domain CEQ50_11765 PF01098 Cell cycle protein CEQ50_11770 PF02875 Mur ligase family, glutamate ligase domain CEQ50_11770 PF08245 Mur ligase middle domain CEQ50_11775 PF00953 Glycosyl transferase family 4 CEQ50_11775 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEQ50_11780 PF01225 Mur ligase family, catalytic domain CEQ50_11780 PF02875 Mur ligase family, glutamate ligase domain CEQ50_11780 PF08245 Mur ligase middle domain CEQ50_11785 PF08245 Mur ligase middle domain CEQ50_11785 PF02875 Mur ligase family, glutamate ligase domain CEQ50_11785 PF01225 Mur ligase family, catalytic domain CEQ50_11790 PF00905 Penicillin binding protein transpeptidase domain CEQ50_11790 PF03717 Penicillin-binding Protein dimerisation domain CEQ50_11795 PF04999 Cell division protein FtsL CEQ50_11800 PF01795 MraW methylase family CEQ50_11810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ50_11815 PF04348 LppC putative lipoprotein CEQ50_11820 PF02021 Uncharacterised protein family UPF0102 CEQ50_11825 PF13580 SIS domain CEQ50_11830 PF04972 BON domain CEQ50_11835 PF04386 Stringent starvation protein B CEQ50_11840 PF02798 Glutathione S-transferase, N-terminal domain CEQ50_11840 PF00043 Glutathione S-transferase, C-terminal domain CEQ50_11845 PF02167 Cytochrome C1 family CEQ50_11850 PF00032 Cytochrome b(C-terminal)/b6/petD CEQ50_11850 PF00033 Cytochrome b/b6/petB CEQ50_11855 PF00355 Rieske [2Fe-2S] domain CEQ50_11855 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CEQ50_11860 PF00380 Ribosomal protein S9/S16 CEQ50_11865 PF00572 Ribosomal protein L13 CEQ50_11875 PF03969 AFG1-like ATPase CEQ50_11880 PF06295 Protein of unknown function (DUF1043) CEQ50_11885 PF00595 PDZ domain CEQ50_11890 PF13180 PDZ domain CEQ50_11895 PF00521 DNA gyrase/topoisomerase IV, subunit A CEQ50_11895 PF03989 DNA gyrase C-terminal domain, beta-propeller CEQ50_11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_11900 PF01751 Toprim domain CEQ50_11900 PF00204 DNA gyrase B CEQ50_11900 PF00986 DNA gyrase B subunit, carboxyl terminus CEQ50_11905 PF05728 Uncharacterised protein family (UPF0227) CEQ50_11910 PF00149 Calcineurin-like phosphoesterase CEQ50_11915 PF06853 Protein of unknown function (DUF1249) CEQ50_11920 PF00293 NUDIX domain CEQ50_11925 PF02321 Outer membrane efflux protein CEQ50_11930 PF01467 Cytidylyltransferase-like CEQ50_11930 PF00294 pfkB family carbohydrate kinase CEQ50_11935 PF08335 GlnD PII-uridylyltransferase CEQ50_11935 PF03710 Glutamate-ammonia ligase adenylyltransferase CEQ50_11940 PF00672 HAMP domain CEQ50_11940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_11950 PF01928 CYTH domain CEQ50_11955 PF01865 Protein of unknown function DUF47 CEQ50_11960 PF01384 Phosphate transporter family CEQ50_11965 PF08239 Bacterial SH3 domain CEQ50_11975 PF13401 AAA domain CEQ50_11975 PF01471 Putative peptidoglycan binding domain CEQ50_11980 PF01966 HD domain CEQ50_11980 PF01743 Poly A polymerase head domain CEQ50_11980 PF12627 Probable RNA and SrmB- binding site of polymerase A CEQ50_11985 PF00113 Enolase, C-terminal TIM barrel domain CEQ50_11985 PF03952 Enolase, N-terminal domain CEQ50_11990 PF00117 Glutamine amidotransferase class-I CEQ50_11990 PF06418 CTP synthase N-terminus CEQ50_11995 PF03819 MazG nucleotide pyrophosphohydrolase domain CEQ50_12000 PF13291 ACT domain CEQ50_12000 PF02824 TGS domain CEQ50_12000 PF04607 Region found in RelA / SpoT proteins CEQ50_12005 PF05958 tRNA (Uracil-5-)-methyltransferase CEQ50_12005 PF01938 TRAM domain CEQ50_12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_12010 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_12010 PF01627 Hpt domain CEQ50_12010 PF00072 Response regulator receiver domain CEQ50_12010 PF00672 HAMP domain CEQ50_12010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEQ50_12015 PF01648 4'-phosphopantetheinyl transferase superfamily CEQ50_12020 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEQ50_12030 PF07650 KH domain CEQ50_12030 PF01926 50S ribosome-binding GTPase CEQ50_12040 PF10502 Signal peptidase, peptidase S26 CEQ50_12045 PF06421 GTP-binding protein LepA C-terminus CEQ50_12045 PF03144 Elongation factor Tu domain 2 CEQ50_12045 PF00009 Elongation factor Tu GTP binding domain CEQ50_12045 PF00679 Elongation factor G C-terminus CEQ50_12055 PF03888 MucB/RseB N-terminal domain CEQ50_12055 PF17188 MucB/RseB C-terminal domain CEQ50_12060 PF03872 Anti sigma-E protein RseA, N-terminal domain CEQ50_12060 PF03873 Anti sigma-E protein RseA, C-terminal domain CEQ50_12065 PF04542 Sigma-70 region 2 CEQ50_12065 PF08281 Sigma-70, region 4 CEQ50_12070 PF02910 Fumarate reductase flavoprotein C-term CEQ50_12070 PF00890 FAD binding domain CEQ50_12080 PF03937 Flavinator of succinate dehydrogenase CEQ50_12100 PF01494 FAD binding domain CEQ50_12105 PF01494 FAD binding domain CEQ50_12115 PF05164 Cell division protein ZapA CEQ50_12125 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEQ50_12130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEQ50_12135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ50_12135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ50_12135 PF01842 ACT domain CEQ50_12140 PF01797 Transposase IS200 like CEQ50_12150 PF10369 Small subunit of acetolactate synthase CEQ50_12155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ50_12155 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ50_12155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ50_12160 PF00501 AMP-binding enzyme CEQ50_12165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_12165 PF03466 LysR substrate binding domain CEQ50_12175 PF01569 PAP2 superfamily CEQ50_12180 PF08502 LeuA allosteric (dimerisation) domain CEQ50_12180 PF00682 HMGL-like CEQ50_12185 PF00180 Isocitrate/isopropylmalate dehydrogenase CEQ50_12190 PF00330 Aconitase family (aconitate hydratase) CEQ50_12195 PF00694 Aconitase C-terminal domain CEQ50_12255 PF03739 Lipopolysaccharide export system permease LptF/LptG CEQ50_12260 PF03739 Lipopolysaccharide export system permease LptF/LptG CEQ50_12265 PF00883 Cytosol aminopeptidase family, catalytic domain CEQ50_12265 PF02789 Cytosol aminopeptidase family, N-terminal domain CEQ50_12270 PF04364 DNA polymerase III chi subunit, HolC CEQ50_12275 PF00133 tRNA synthetases class I (I, L, M and V) CEQ50_12275 PF08264 Anticodon-binding domain of tRNA CEQ50_12275 PF10458 Valyl tRNA synthetase tRNA binding arm CEQ50_12280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ50_12280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ50_12285 PF00849 RNA pseudouridylate synthase CEQ50_12295 PF00271 Helicase conserved C-terminal domain CEQ50_12295 PF12137 RNA polymerase recycling family C-terminal CEQ50_12295 PF00176 SNF2 family N-terminal domain CEQ50_12295 PF18339 RapA N-terminal Tudor like domain 1 CEQ50_12295 PF18337 RapA N-terminal Tudor like domain CEQ50_12305 PF02562 PhoH-like protein CEQ50_12305 PF13638 PIN domain CEQ50_12310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEQ50_12310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEQ50_12315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEQ50_12315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEQ50_12320 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEQ50_12320 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEQ50_12325 PF01042 Endoribonuclease L-PSP CEQ50_12335 PF00072 Response regulator receiver domain CEQ50_12335 PF08448 PAS fold CEQ50_12335 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_12335 PF13188 PAS domain CEQ50_12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_12340 PF01553 Acyltransferase CEQ50_12345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEQ50_12350 PF01722 BolA-like protein CEQ50_12360 PF05494 MlaC protein CEQ50_12365 PF02470 MlaD protein CEQ50_12370 PF02405 Permease MlaE CEQ50_12375 PF00005 ABC transporter CEQ50_12380 PF01699 Sodium/calcium exchanger protein CEQ50_12385 PF01380 SIS domain CEQ50_12385 PF00571 CBS domain CEQ50_12400 PF03968 OstA-like protein CEQ50_12405 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEQ50_12405 PF00005 ABC transporter CEQ50_12410 PF04963 Sigma-54 factor, core binding domain CEQ50_12410 PF04552 Sigma-54, DNA binding domain CEQ50_12410 PF00309 Sigma-54 factor, Activator interacting domain (AID) CEQ50_12415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEQ50_12420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_12425 PF03668 P-loop ATPase protein family CEQ50_12430 PF00381 PTS HPr component phosphorylation site CEQ50_12435 PF01769 Divalent cation transporter CEQ50_12435 PF03448 MgtE intracellular N domain CEQ50_12435 PF00571 CBS domain CEQ50_12440 PF01523 Putative modulator of DNA gyrase CEQ50_12445 PF04751 Protein of unknown function (DUF615) CEQ50_12450 PF00005 ABC transporter CEQ50_12455 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_12465 PF02441 Flavoprotein CEQ50_12470 PF08245 Mur ligase middle domain CEQ50_12470 PF02875 Mur ligase family, glutamate ligase domain CEQ50_12470 PF01225 Mur ligase family, catalytic domain CEQ50_12475 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEQ50_12480 PF00719 Inorganic pyrophosphatase CEQ50_12490 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CEQ50_12495 PF04357 TamB, inner membrane protein subunit of TAM complex CEQ50_12500 PF01103 Surface antigen CEQ50_12500 PF07244 Surface antigen variable number repeat CEQ50_12500 PF17243 POTRA domain TamA domain 1 CEQ50_12505 PF01625 Peptide methionine sulfoxide reductase CEQ50_12510 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CEQ50_12525 PF00005 ABC transporter CEQ50_12550 PF00009 Elongation factor Tu GTP binding domain CEQ50_12555 PF01507 Phosphoadenosine phosphosulfate reductase family CEQ50_12560 PF10414 Sirohaem synthase dimerisation region CEQ50_12560 PF14824 Sirohaem biosynthesis protein central CEQ50_12560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ50_12565 PF02872 5'-nucleotidase, C-terminal domain CEQ50_12565 PF00149 Calcineurin-like phosphoesterase CEQ50_12605 PF00271 Helicase conserved C-terminal domain CEQ50_12605 PF03880 DbpA RNA binding domain CEQ50_12605 PF00270 DEAD/DEAH box helicase CEQ50_12610 PF13673 Acetyltransferase (GNAT) domain CEQ50_12615 PF04225 Opacity-associated protein A LysM-like domain CEQ50_12615 PF08525 Opacity-associated protein A N-terminal motif CEQ50_12620 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEQ50_12620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ50_12625 PF01196 Ribosomal protein L17 CEQ50_12635 PF00163 Ribosomal protein S4/S9 N-terminal domain CEQ50_12635 PF01479 S4 domain CEQ50_12640 PF00411 Ribosomal protein S11 CEQ50_12645 PF00416 Ribosomal protein S13/S18 CEQ50_12650 PF00444 Ribosomal protein L36 CEQ50_12655 PF00344 SecY translocase CEQ50_12660 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CEQ50_12665 PF00327 Ribosomal protein L30p/L7e CEQ50_12675 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CEQ50_12680 PF00347 Ribosomal protein L6 CEQ50_12685 PF00410 Ribosomal protein S8 CEQ50_12690 PF00253 Ribosomal protein S14p/S29e CEQ50_12695 PF00281 Ribosomal protein L5 CEQ50_12695 PF00673 ribosomal L5P family C-terminus CEQ50_12705 PF00238 Ribosomal protein L14p/L23e CEQ50_12710 PF00366 Ribosomal protein S17 CEQ50_12715 PF00831 Ribosomal L29 protein CEQ50_12720 PF00252 Ribosomal protein L16p/L10e CEQ50_12725 PF00189 Ribosomal protein S3, C-terminal domain CEQ50_12725 PF07650 KH domain CEQ50_12730 PF00237 Ribosomal protein L22p/L17e CEQ50_12735 PF00203 Ribosomal protein S19 CEQ50_12740 PF00181 Ribosomal Proteins L2, RNA binding domain CEQ50_12740 PF03947 Ribosomal Proteins L2, C-terminal domain CEQ50_12745 PF00276 Ribosomal protein L23 CEQ50_12760 PF00338 Ribosomal protein S10p/S20e CEQ50_12765 PF00588 SpoU rRNA Methylase family CEQ50_12765 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEQ50_12770 PF17876 Cold shock domain CEQ50_12770 PF08461 Ribonuclease R winged-helix domain CEQ50_12770 PF00773 RNB domain CEQ50_12770 PF08206 Ribonuclease B OB domain CEQ50_12770 PF00575 S1 RNA binding domain CEQ50_12775 PF08238 Sel1 repeat CEQ50_12785 PF00709 Adenylosuccinate synthetase CEQ50_12790 PF01112 Asparaginase CEQ50_12795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ50_12800 PF09526 Probable metal-binding protein (DUF2387) CEQ50_12805 PF00999 Sodium/hydrogen exchanger family CEQ50_12805 PF02254 TrkA-N domain CEQ50_12810 PF02525 Flavodoxin-like fold CEQ50_12815 PF00005 ABC transporter CEQ50_12815 PF12848 ABC transporter CEQ50_12825 PF00561 alpha/beta hydrolase fold CEQ50_12830 PF06794 Uncharacterised protein family (UPF0270) CEQ50_12835 PF00485 Phosphoribulokinase / Uridine kinase family CEQ50_12840 PF00027 Cyclic nucleotide-binding domain CEQ50_12840 PF13545 Crp-like helix-turn-helix domain CEQ50_12855 PF04958 Arginine N-succinyltransferase beta subunit CEQ50_12860 PF00202 Aminotransferase class-III CEQ50_12865 PF00117 Glutamine amidotransferase class-I CEQ50_12875 PF01494 FAD binding domain CEQ50_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_12885 PF03466 LysR substrate binding domain CEQ50_12900 PF00579 tRNA synthetases class I (W and Y) CEQ50_12905 PF13419 Haloacid dehalogenase-like hydrolase CEQ50_12910 PF00834 Ribulose-phosphate 3 epimerase family CEQ50_12915 PF02086 D12 class N6 adenine-specific DNA methyltransferase CEQ50_12930 PF01202 Shikimate kinase CEQ50_12935 PF00263 Bacterial type II and III secretion system protein CEQ50_12935 PF03958 Bacterial type II/III secretion system short domain CEQ50_12935 PF07660 Secretin and TonB N terminus short domain CEQ50_12935 PF11741 AMIN domain CEQ50_12960 PF17092 Penicillin-binding protein OB-like domain CEQ50_12960 PF00912 Transglycosylase CEQ50_12960 PF00905 Penicillin binding protein transpeptidase domain CEQ50_12965 PF03466 LysR substrate binding domain CEQ50_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_12970 PF08534 Redoxin CEQ50_12970 PF00462 Glutaredoxin CEQ50_12975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ50_12975 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_12985 PF00583 Acetyltransferase (GNAT) family CEQ50_12985 PF14698 Argininosuccinate lyase C-terminal CEQ50_12985 PF00206 Lyase CEQ50_12990 PF00764 Arginosuccinate synthase CEQ50_12995 PF00696 Amino acid kinase family CEQ50_13000 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEQ50_13000 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEQ50_13020 PF06426 Serine acetyltransferase, N-terminal CEQ50_13020 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_13025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEQ50_13025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEQ50_13030 PF02556 Preprotein translocase subunit SecB CEQ50_13035 PF00581 Rhodanese-like domain CEQ50_13040 PF00152 tRNA synthetases class II (D, K and N) CEQ50_13045 PF00890 FAD binding domain CEQ50_13045 PF02910 Fumarate reductase flavoprotein C-term CEQ50_13050 PF13183 4Fe-4S dicluster domain CEQ50_13050 PF13085 2Fe-2S iron-sulfur cluster binding domain CEQ50_13055 PF02300 Fumarate reductase subunit C CEQ50_13060 PF02313 Fumarate reductase subunit D CEQ50_13065 PF08207 Elongation factor P (EF-P) KOW-like domain CEQ50_13065 PF01132 Elongation factor P (EF-P) OB domain CEQ50_13065 PF09285 Elongation factor P, C-terminal CEQ50_13070 PF04055 Radical SAM superfamily CEQ50_13075 PF02308 MgtC family CEQ50_13085 PF00118 TCP-1/cpn60 chaperonin family CEQ50_13090 PF00166 Chaperonin 10 Kd subunit CEQ50_13115 PF00121 Triosephosphate isomerase CEQ50_13120 PF01554 MatE CEQ50_13125 PF03737 Aldolase/RraA CEQ50_13130 PF01040 UbiA prenyltransferase family CEQ50_13135 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ50_13135 PF07724 AAA domain (Cdc48 subfamily) CEQ50_13135 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_13140 PF00227 Proteasome subunit CEQ50_13150 PF00356 Bacterial regulatory proteins, lacI family CEQ50_13155 PF00271 Helicase conserved C-terminal domain CEQ50_13155 PF00270 DEAD/DEAH box helicase CEQ50_13155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CEQ50_13155 PF18074 Primosomal protein N C-terminal domain CEQ50_13155 PF17764 3′ DNA-binding domain (3′BD) CEQ50_13160 PF01197 Ribosomal protein L31 CEQ50_13165 PF03949 Malic enzyme, NAD binding domain CEQ50_13165 PF00390 Malic enzyme, N-terminal domain CEQ50_13170 PF01340 Met Apo-repressor, MetJ CEQ50_13175 PF01053 Cys/Met metabolism PLP-dependent enzyme CEQ50_13180 PF00696 Amino acid kinase family CEQ50_13180 PF00742 Homoserine dehydrogenase CEQ50_13180 PF03447 Homoserine dehydrogenase, NAD binding domain CEQ50_13185 PF02219 Methylenetetrahydrofolate reductase CEQ50_13195 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEQ50_13200 PF00365 Phosphofructokinase CEQ50_13205 PF16916 Dimerisation domain of Zinc Transporter CEQ50_13205 PF01545 Cation efflux family CEQ50_13215 PF00486 Transcriptional regulatory protein, C terminal CEQ50_13215 PF00072 Response regulator receiver domain CEQ50_13220 PF16527 Two-component sensor protein CpxA, periplasmic domain CEQ50_13220 PF00672 HAMP domain CEQ50_13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_13220 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_13225 PF00588 SpoU rRNA Methylase family CEQ50_13230 PF00313 'Cold-shock' DNA-binding domain CEQ50_13235 PF04186 FxsA cytoplasmic membrane protein CEQ50_13240 PF00206 Lyase CEQ50_13240 PF10415 Fumarase C C-terminus CEQ50_13245 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEQ50_13250 PF03606 C4-dicarboxylate anaerobic carrier CEQ50_13260 PF00696 Amino acid kinase family CEQ50_13265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEQ50_13265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEQ50_13275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEQ50_13275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEQ50_13280 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEQ50_13280 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEQ50_13285 PF01316 Arginine repressor, DNA binding domain CEQ50_13285 PF02863 Arginine repressor, C-terminal domain CEQ50_13290 PF11412 Disulphide bond corrector protein DsbC CEQ50_13290 PF02683 Cytochrome C biogenesis protein transmembrane region CEQ50_13295 PF00196 Bacterial regulatory proteins, luxR family CEQ50_13295 PF00072 Response regulator receiver domain CEQ50_13300 PF02080 TrkA-C domain CEQ50_13300 PF00999 Sodium/hydrogen exchanger family CEQ50_13300 PF03471 Transporter associated domain CEQ50_13310 PF00474 Sodium:solute symporter family CEQ50_13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_13315 PF00072 Response regulator receiver domain CEQ50_13315 PF00672 HAMP domain CEQ50_13315 PF01627 Hpt domain CEQ50_13315 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_13320 PF12832 MFS_1 like family CEQ50_13335 PF13193 AMP-binding enzyme C-terminal domain CEQ50_13335 PF00501 AMP-binding enzyme CEQ50_13335 PF16177 Acetyl-coenzyme A synthetase N-terminus CEQ50_13340 PF01220 Dehydroquinase class II CEQ50_13345 PF00364 Biotin-requiring enzyme CEQ50_13350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEQ50_13350 PF00289 Biotin carboxylase, N-terminal domain CEQ50_13350 PF02785 Biotin carboxylase C-terminal domain CEQ50_13360 PF01207 Dihydrouridine synthase (Dus) CEQ50_13365 PF02954 Bacterial regulatory protein, Fis family CEQ50_13370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_13370 PF17200 Single Cache domain 2 CEQ50_13370 PF00672 HAMP domain CEQ50_13375 PF13411 MerR HTH family regulatory protein CEQ50_13380 PF02142 MGS-like domain CEQ50_13380 PF01808 AICARFT/IMPCHase bienzyme CEQ50_13385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEQ50_13385 PF02843 Phosphoribosylglycinamide synthetase, C domain CEQ50_13385 PF02844 Phosphoribosylglycinamide synthetase, N domain CEQ50_13395 PF00216 Bacterial DNA-binding protein CEQ50_13400 PF01595 Cyclin M transmembrane N-terminal domain CEQ50_13400 PF00571 CBS domain CEQ50_13425 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CEQ50_13430 PF06251 Capsule biosynthesis GfcC CEQ50_13435 PF06082 Exopolysaccharide biosynthesis protein YbjH CEQ50_13445 PF04222 Protein of unknown function (DUF416) CEQ50_13450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ50_13455 PF00924 Mechanosensitive ion channel CEQ50_13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_13460 PF00672 HAMP domain CEQ50_13470 PF02281 Transposase Tn5 dimerisation domain CEQ50_13470 PF01609 Transposase DDE domain CEQ50_13470 PF14706 Transposase DNA-binding CEQ50_13480 PF02719 Polysaccharide biosynthesis protein CEQ50_13485 PF02397 Bacterial sugar transferase CEQ50_13490 PF01370 NAD dependent epimerase/dehydratase family CEQ50_13495 PF13477 Glycosyl transferase 4-like CEQ50_13495 PF00534 Glycosyl transferases group 1 CEQ50_13500 PF00733 Asparagine synthase CEQ50_13500 PF13537 Glutamine amidotransferase domain CEQ50_13505 PF13477 Glycosyl transferase 4-like CEQ50_13505 PF00534 Glycosyl transferases group 1 CEQ50_13510 PF00551 Formyl transferase CEQ50_13510 PF02911 Formyl transferase, C-terminal domain CEQ50_13525 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_13535 PF00535 Glycosyl transferase family 2 CEQ50_13565 PF02780 Transketolase, C-terminal domain CEQ50_13565 PF02779 Transketolase, pyrimidine binding domain CEQ50_13570 PF00676 Dehydrogenase E1 component CEQ50_13575 PF08889 WbqC-like protein family CEQ50_13580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEQ50_13585 PF00483 Nucleotidyl transferase CEQ50_13590 PF16363 GDP-mannose 4,6 dehydratase CEQ50_13595 PF01370 NAD dependent epimerase/dehydratase family CEQ50_13600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEQ50_13600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEQ50_13600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEQ50_13605 PF02706 Chain length determinant protein CEQ50_13610 PF01370 NAD dependent epimerase/dehydratase family CEQ50_13625 PF04932 O-Antigen ligase CEQ50_13635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEQ50_13645 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CEQ50_13650 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEQ50_13685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEQ50_13690 PF00535 Glycosyl transferase family 2 CEQ50_13695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEQ50_13700 PF01467 Cytidylyltransferase-like CEQ50_13705 PF06827 Zinc finger found in FPG and IleRS CEQ50_13705 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEQ50_13705 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEQ50_13715 PF00471 Ribosomal protein L33 CEQ50_13725 PF04002 RadC-like JAB domain CEQ50_13730 PF02441 Flavoprotein CEQ50_13730 PF04127 DNA / pantothenate metabolism flavoprotein CEQ50_13735 PF00440 Bacterial regulatory proteins, tetR family CEQ50_13740 PF03279 Bacterial lipid A biosynthesis acyltransferase CEQ50_13745 PF03279 Bacterial lipid A biosynthesis acyltransferase CEQ50_13755 PF01138 3' exoribonuclease family, domain 1 CEQ50_13755 PF03725 3' exoribonuclease family, domain 2 CEQ50_13760 PF03755 YicC-like family, N-terminal region CEQ50_13760 PF08340 Domain of unknown function (DUF1732) CEQ50_13765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CEQ50_13770 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CEQ50_13775 PF04223 Citrate lyase, alpha subunit (CitF) CEQ50_13780 PF03328 HpcH/HpaI aldolase/citrate lyase family CEQ50_13785 PF06857 Malonate decarboxylase delta subunit (MdcD) CEQ50_13790 PF08218 Citrate lyase ligase C-terminal domain CEQ50_13795 PF03390 2-hydroxycarboxylate transporter family CEQ50_13805 PF00682 HMGL-like CEQ50_13805 PF02436 Conserved carboxylase domain CEQ50_13805 PF00364 Biotin-requiring enzyme CEQ50_13810 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CEQ50_13815 PF17203 Single cache domain 3 CEQ50_13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_13820 PF00072 Response regulator receiver domain CEQ50_13820 PF12431 Transcriptional regulator CEQ50_13835 PF05193 Peptidase M16 inactive domain CEQ50_13835 PF00675 Insulinase (Peptidase family M16) CEQ50_13840 PF03350 Uncharacterized protein family, UPF0114 CEQ50_13845 PF01032 FecCD transport family CEQ50_13850 PF01497 Periplasmic binding protein CEQ50_13855 PF00005 ABC transporter CEQ50_13860 PF00593 TonB dependent receptor CEQ50_13860 PF07715 TonB-dependent Receptor Plug Domain CEQ50_13865 PF00005 ABC transporter CEQ50_13865 PF00664 ABC transporter transmembrane region CEQ50_13870 PF00367 phosphotransferase system, EIIB CEQ50_13870 PF02378 Phosphotransferase system, EIIC CEQ50_13875 PF01380 SIS domain CEQ50_13880 PF01418 Helix-turn-helix domain, rpiR family CEQ50_13880 PF01380 SIS domain CEQ50_13895 PF00271 Helicase conserved C-terminal domain CEQ50_13895 PF00270 DEAD/DEAH box helicase CEQ50_13895 PF00570 HRDC domain CEQ50_13895 PF16124 RecQ zinc-binding CEQ50_13895 PF09382 RQC domain CEQ50_13900 PF00892 EamA-like transporter family CEQ50_13910 PF01810 LysE type translocator CEQ50_13915 PF14706 Transposase DNA-binding CEQ50_13915 PF02281 Transposase Tn5 dimerisation domain CEQ50_13915 PF01609 Transposase DDE domain CEQ50_13920 PF00580 UvrD/REP helicase N-terminal domain CEQ50_13920 PF13361 UvrD-like helicase C-terminal domain CEQ50_13925 PF01432 Peptidase family M3 CEQ50_13930 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CEQ50_13935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_13935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ50_13980 PF16671 Actin cross-linking domain CEQ50_13980 PF04717 Type VI secretion system, phage-baseplate injector CEQ50_13985 PF05638 Type VI secretion system effector, Hcp CEQ50_13990 PF13289 SIR2-like domain CEQ50_14000 PF00072 Response regulator receiver domain CEQ50_14015 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ50_14015 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_14025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ50_14030 PF00005 ABC transporter CEQ50_14030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_14060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEQ50_14065 PF13361 UvrD-like helicase C-terminal domain CEQ50_14065 PF00580 UvrD/REP helicase N-terminal domain CEQ50_14070 PF00440 Bacterial regulatory proteins, tetR family CEQ50_14070 PF08359 YsiA-like protein, C-terminal region CEQ50_14075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_14080 PF00873 AcrB/AcrD/AcrF family CEQ50_14085 PF04380 Membrane fusogenic activity CEQ50_14090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEQ50_14090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CEQ50_14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_14095 PF03466 LysR substrate binding domain CEQ50_14100 PF04055 Radical SAM superfamily CEQ50_14100 PF06969 HemN C-terminal domain CEQ50_14105 PF10675 Protein of unknown function (DUF2489) CEQ50_14110 PF04220 Der GTPase activator (YihI) CEQ50_14120 PF00034 Cytochrome c CEQ50_14125 PF01926 50S ribosome-binding GTPase CEQ50_14130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEQ50_14130 PF00476 DNA polymerase family A CEQ50_14130 PF01612 3'-5' exonuclease CEQ50_14130 PF01367 5'-3' exonuclease, C-terminal SAM fold CEQ50_14135 PF00490 Delta-aminolevulinic acid dehydratase CEQ50_14140 PF01026 TatD related DNase CEQ50_14145 PF00902 Sec-independent protein translocase protein (TatC) CEQ50_14150 PF02416 mttA/Hcf106 family CEQ50_14155 PF02416 mttA/Hcf106 family CEQ50_14160 PF03109 ABC1 family CEQ50_14165 PF02036 SCP-2 sterol transfer family CEQ50_14170 PF01209 ubiE/COQ5 methyltransferase family CEQ50_14175 PF02646 RmuC family CEQ50_14185 PF12833 Helix-turn-helix domain CEQ50_14185 PF02311 AraC-like ligand binding domain CEQ50_14195 PF02610 L-arabinose isomerase CEQ50_14195 PF11762 L-arabinose isomerase C-terminal domain CEQ50_14200 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ50_14205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ50_14205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ50_14215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ50_14220 PF00005 ABC transporter CEQ50_14225 PF02653 Branched-chain amino acid transport system / permease component CEQ50_14230 PF06414 Zeta toxin CEQ50_14245 PF10625 Universal stress protein B (UspB) CEQ50_14250 PF00210 Ferritin-like domain CEQ50_14255 PF00582 Universal stress protein family CEQ50_14260 PF00892 EamA-like transporter family CEQ50_14270 PF04445 Putative SAM-dependent methyltransferase CEQ50_14275 PF01037 Lrp/AsnC ligand binding domain CEQ50_14285 PF07690 Major Facilitator Superfamily CEQ50_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_14290 PF03466 LysR substrate binding domain CEQ50_14295 PF01321 Creatinase/Prolidase N-terminal domain CEQ50_14295 PF00557 Metallopeptidase family M24 CEQ50_14295 PF01321 Creatinase/Prolidase N-terminal domain CEQ50_14295 PF00557 Metallopeptidase family M24 CEQ50_14300 PF04055 Radical SAM superfamily CEQ50_14300 PF06968 Biotin and Thiamin Synthesis associated domain CEQ50_14305 PF05690 Thiazole biosynthesis protein ThiG CEQ50_14310 PF02597 ThiS family CEQ50_14315 PF00899 ThiF family CEQ50_14320 PF02581 Thiamine monophosphate synthase CEQ50_14325 PF13667 ThiC-associated domain CEQ50_14325 PF01964 Radical SAM ThiC family CEQ50_14330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEQ50_14400 PF12724 Flavodoxin domain CEQ50_14405 PF02386 Cation transport protein CEQ50_14410 PF01205 Uncharacterized protein family UPF0029 CEQ50_14410 PF09186 Domain of unknown function (DUF1949) CEQ50_14415 PF00378 Enoyl-CoA hydratase/isomerase CEQ50_14415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEQ50_14415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEQ50_14420 PF02803 Thiolase, C-terminal domain CEQ50_14420 PF00108 Thiolase, N-terminal domain CEQ50_14425 PF03466 LysR substrate binding domain CEQ50_14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_14430 PF07690 Major Facilitator Superfamily CEQ50_14435 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_14435 PF14602 Hexapeptide repeat of succinyl-transferase CEQ50_14435 PF12804 MobA-like NTP transferase domain CEQ50_14440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEQ50_14440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEQ50_14445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ50_14445 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEQ50_14450 PF00231 ATP synthase CEQ50_14455 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEQ50_14455 PF00306 ATP synthase alpha/beta chain, C terminal domain CEQ50_14455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEQ50_14460 PF00213 ATP synthase delta (OSCP) subunit CEQ50_14465 PF00430 ATP synthase B/B' CF(0) CEQ50_14470 PF00137 ATP synthase subunit C CEQ50_14475 PF00119 ATP synthase A chain CEQ50_14480 PF03899 ATP synthase I chain CEQ50_14485 PF02195 ParB-like nuclease domain CEQ50_14485 PF17762 HTH domain found in ParB protein CEQ50_14490 PF13614 AAA domain CEQ50_14495 PF02527 rRNA small subunit methyltransferase G CEQ50_14500 PF01134 Glucose inhibited division protein A CEQ50_14500 PF13932 GidA associated domain CEQ50_14525 PF01709 Transcriptional regulator CEQ50_14530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEQ50_14530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEQ50_14535 PF03222 Tryptophan/tyrosine permease family CEQ50_14565 PF03466 LysR substrate binding domain CEQ50_14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_14570 PF13460 NAD(P)H-binding CEQ50_14580 PF03733 Inner membrane component domain CEQ50_14600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEQ50_14600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEQ50_14605 PF00730 HhH-GPD superfamily base excision DNA repair protein CEQ50_14605 PF06029 AlkA N-terminal domain CEQ50_14610 PF03466 LysR substrate binding domain CEQ50_14610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_14625 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEQ50_14635 PF04225 Opacity-associated protein A LysM-like domain CEQ50_14635 PF01551 Peptidase family M23 CEQ50_14640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_14640 PF02378 Phosphotransferase system, EIIC CEQ50_14640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ50_14645 PF08125 Mannitol dehydrogenase C-terminal domain CEQ50_14645 PF01232 Mannitol dehydrogenase Rossmann domain CEQ50_14650 PF05068 Mannitol repressor CEQ50_14655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ50_14660 PF03600 Citrate transporter CEQ50_14665 PF00375 Sodium:dicarboxylate symporter family CEQ50_14670 PF07681 DoxX CEQ50_14690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_14690 PF00529 HlyD membrane-fusion protein of T1SS CEQ50_14695 PF01047 MarR family CEQ50_14700 PF04393 Protein of unknown function (DUF535) CEQ50_14705 PF00563 EAL domain CEQ50_14705 PF12792 CSS motif domain associated with EAL CEQ50_14710 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CEQ50_14715 PF00581 Rhodanese-like domain CEQ50_14725 PF00005 ABC transporter CEQ50_14740 PF00005 ABC transporter CEQ50_14740 PF08402 TOBE domain CEQ50_14750 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_14765 PF00392 Bacterial regulatory proteins, gntR family CEQ50_14765 PF07702 UTRA domain CEQ50_14770 PF00270 DEAD/DEAH box helicase CEQ50_14770 PF00271 Helicase conserved C-terminal domain CEQ50_14775 PF01042 Endoribonuclease L-PSP CEQ50_14780 PF13419 Haloacid dehalogenase-like hydrolase CEQ50_14790 PF04055 Radical SAM superfamily CEQ50_14795 PF11230 Protein of unknown function (DUF3029) CEQ50_14805 PF00107 Zinc-binding dehydrogenase CEQ50_14805 PF16884 N-terminal domain of oxidoreductase CEQ50_14810 PF16925 Tetracyclin repressor-like, C-terminal domain CEQ50_14810 PF00440 Bacterial regulatory proteins, tetR family CEQ50_14825 PF00072 Response regulator receiver domain CEQ50_14825 PF00486 Transcriptional regulatory protein, C terminal CEQ50_14835 PF00849 RNA pseudouridylate synthase CEQ50_14890 PF00004 ATPase family associated with various cellular activities (AAA) CEQ50_14890 PF07724 AAA domain (Cdc48 subfamily) CEQ50_14890 PF17871 AAA lid domain CEQ50_14890 PF10431 C-terminal, D2-small domain, of ClpB protein CEQ50_14920 PF04717 Type VI secretion system, phage-baseplate injector CEQ50_14920 PF16671 Actin cross-linking domain CEQ50_14975 PF00939 Sodium:sulfate symporter transmembrane region CEQ50_14980 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CEQ50_14985 PF08329 Chitinase A, N-terminal domain CEQ50_14985 PF00704 Glycosyl hydrolases family 18 CEQ50_14990 PF07702 UTRA domain CEQ50_14990 PF00392 Bacterial regulatory proteins, gntR family CEQ50_14995 PF00005 ABC transporter CEQ50_15005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_15005 PF00672 HAMP domain CEQ50_15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_15020 PF00672 HAMP domain CEQ50_15020 PF02743 Cache domain CEQ50_15035 PF01569 PAP2 superfamily CEQ50_15040 PF04286 Protein of unknown function (DUF445) CEQ50_15045 PF00664 ABC transporter transmembrane region CEQ50_15045 PF00005 ABC transporter CEQ50_15055 PF00563 EAL domain CEQ50_15055 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_15055 PF03707 Bacterial signalling protein N terminal repeat CEQ50_15065 PF01261 Xylose isomerase-like TIM barrel CEQ50_15070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ50_15080 PF00596 Class II Aldolase and Adducin N-terminal domain CEQ50_15085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_15090 PF03611 PTS system sugar-specific permease component CEQ50_15095 PF08220 DeoR-like helix-turn-helix domain CEQ50_15095 PF00455 DeoR C terminal sensor domain CEQ50_15105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEQ50_15105 PF00128 Alpha amylase, catalytic domain CEQ50_15110 PF02264 LamB porin CEQ50_15115 PF07148 Maltose operon periplasmic protein precursor (MalM) CEQ50_15130 PF00375 Sodium:dicarboxylate symporter family CEQ50_15140 PF02630 SCO1/SenC CEQ50_15155 PF03616 Sodium/glutamate symporter CEQ50_15160 PF12945 Flagellar protein YcgR CEQ50_15160 PF07238 PilZ domain CEQ50_15180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_15180 PF00529 HlyD membrane-fusion protein of T1SS CEQ50_15185 PF11742 Protein of unknown function (DUF3302) CEQ50_15190 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_15205 PF01048 Phosphorylase superfamily CEQ50_15210 PF08349 Protein of unknown function (DUF1722) CEQ50_15215 PF13411 MerR HTH family regulatory protein CEQ50_15220 PF00875 DNA photolyase CEQ50_15220 PF03441 FAD binding domain of DNA photolyase CEQ50_15225 PF17969 L,D-transpeptidase C-terminal domain CEQ50_15225 PF01476 LysM domain CEQ50_15225 PF03734 L,D-transpeptidase catalytic domain CEQ50_15235 PF00270 DEAD/DEAH box helicase CEQ50_15235 PF00271 Helicase conserved C-terminal domain CEQ50_15245 PF00593 TonB dependent receptor CEQ50_15245 PF07715 TonB-dependent Receptor Plug Domain CEQ50_15265 PF12262 Bacterial virulence factor lipase N-terminal CEQ50_15270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEQ50_15275 PF00128 Alpha amylase, catalytic domain CEQ50_15280 PF00248 Aldo/keto reductase family CEQ50_15290 PF02687 FtsX-like permease family CEQ50_15290 PF12704 MacB-like periplasmic core domain CEQ50_15290 PF00005 ABC transporter CEQ50_15295 PF12704 MacB-like periplasmic core domain CEQ50_15295 PF02687 FtsX-like permease family CEQ50_15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_15310 PF06580 Histidine kinase CEQ50_15315 PF00072 Response regulator receiver domain CEQ50_15315 PF04397 LytTr DNA-binding domain CEQ50_15320 PF00563 EAL domain CEQ50_15320 PF00360 Phytochrome region CEQ50_15320 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_15320 PF01590 GAF domain CEQ50_15330 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEQ50_15340 PF00072 Response regulator receiver domain CEQ50_15345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEQ50_15345 PF01627 Hpt domain CEQ50_15345 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_15345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_15345 PF00672 HAMP domain CEQ50_15345 PF00072 Response regulator receiver domain CEQ50_15350 PF00672 HAMP domain CEQ50_15350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_15355 PF13520 Amino acid permease CEQ50_15375 PF00175 Oxidoreductase NAD-binding domain CEQ50_15375 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ50_15375 PF00970 Oxidoreductase FAD-binding domain CEQ50_15380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEQ50_15380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ50_15385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEQ50_15385 PF00072 Response regulator receiver domain CEQ50_15385 PF01627 Hpt domain CEQ50_15385 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_15385 PF00672 HAMP domain CEQ50_15405 PF00873 AcrB/AcrD/AcrF family CEQ50_15415 PF00356 Bacterial regulatory proteins, lacI family CEQ50_15420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_15430 PF03611 PTS system sugar-specific permease component CEQ50_15435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEQ50_15440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEQ50_15445 PF02566 OsmC-like protein CEQ50_15450 PF14602 Hexapeptide repeat of succinyl-transferase CEQ50_15450 PF12464 Maltose acetyltransferase CEQ50_15455 PF00892 EamA-like transporter family CEQ50_15465 PF03466 LysR substrate binding domain CEQ50_15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_15475 PF03466 LysR substrate binding domain CEQ50_15480 PF00501 AMP-binding enzyme CEQ50_15480 PF13193 AMP-binding enzyme C-terminal domain CEQ50_15485 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CEQ50_15490 PF01329 Pterin 4 alpha carbinolamine dehydratase CEQ50_15495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_15495 PF02743 Cache domain CEQ50_15495 PF00672 HAMP domain CEQ50_15500 PF01554 MatE CEQ50_15505 PF12833 Helix-turn-helix domain CEQ50_15505 PF02311 AraC-like ligand binding domain CEQ50_15510 PF11849 Domain of unknown function (DUF3369) CEQ50_15520 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_15520 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_15530 PF07690 Major Facilitator Superfamily CEQ50_15540 PF00012 Hsp70 protein CEQ50_15550 PF01037 Lrp/AsnC ligand binding domain CEQ50_15555 PF00657 GDSL-like Lipase/Acylhydrolase CEQ50_15560 PF07968 Leukocidin/Hemolysin toxin family CEQ50_15560 PF12563 Hemolytic toxin N terminal CEQ50_15560 PF16458 Beta-prism lectin CEQ50_15565 PF00561 alpha/beta hydrolase fold CEQ50_15570 PF03280 Proteobacterial lipase chaperone protein CEQ50_15575 PF00801 PKD domain CEQ50_15575 PF05547 Immune inhibitor A peptidase M6 CEQ50_15590 PF08453 Peptidase family M9 N-terminal CEQ50_15590 PF04151 Bacterial pre-peptidase C-terminal domain CEQ50_15590 PF01752 Collagenase CEQ50_15600 PF01497 Periplasmic binding protein CEQ50_15605 PF01032 FecCD transport family CEQ50_15610 PF01032 FecCD transport family CEQ50_15615 PF00005 ABC transporter CEQ50_15620 PF00871 Acetokinase family CEQ50_15625 PF13006 Insertion element 4 transposase N-terminal CEQ50_15625 PF01609 Transposase DDE domain CEQ50_15635 PF13673 Acetyltransferase (GNAT) domain CEQ50_15640 PF00892 EamA-like transporter family CEQ50_15645 PF01699 Sodium/calcium exchanger protein CEQ50_15650 PF03741 Integral membrane protein TerC family CEQ50_15680 PF02347 Glycine cleavage system P-protein CEQ50_15690 PF00464 Serine hydroxymethyltransferase CEQ50_15700 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEQ50_15700 PF01571 Aminomethyltransferase folate-binding domain CEQ50_15720 PF13289 SIR2-like domain CEQ50_15725 PF05638 Type VI secretion system effector, Hcp CEQ50_15730 PF04717 Type VI secretion system, phage-baseplate injector CEQ50_15730 PF16671 Actin cross-linking domain CEQ50_15800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEQ50_15800 PF02378 Phosphotransferase system, EIIC CEQ50_15805 PF00294 pfkB family carbohydrate kinase CEQ50_15810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEQ50_15810 PF00381 PTS HPr component phosphorylation site CEQ50_15815 PF00356 Bacterial regulatory proteins, lacI family CEQ50_15815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ50_15820 PF12320 Type 5 capsule protein repressor C-terminal domain CEQ50_15820 PF00149 Calcineurin-like phosphoesterase CEQ50_15825 PF13476 AAA domain CEQ50_15830 PF00072 Response regulator receiver domain CEQ50_15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_15835 PF00155 Aminotransferase class I and II CEQ50_15845 PF00654 Voltage gated chloride channel CEQ50_15850 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEQ50_15850 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEQ50_15855 PF00005 ABC transporter CEQ50_15860 PF00005 ABC transporter CEQ50_15860 PF12704 MacB-like periplasmic core domain CEQ50_15860 PF02687 FtsX-like permease family CEQ50_15865 PF00005 ABC transporter CEQ50_15865 PF02687 FtsX-like permease family CEQ50_15865 PF12704 MacB-like periplasmic core domain CEQ50_15880 PF01926 50S ribosome-binding GTPase CEQ50_15905 PF03608 PTS system enzyme II sorbitol-specific factor CEQ50_15910 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CEQ50_15910 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CEQ50_15915 PF03829 PTS system glucitol/sorbitol-specific IIA component CEQ50_15920 PF00106 short chain dehydrogenase CEQ50_15925 PF06923 Glucitol operon activator protein (GutM) CEQ50_15930 PF08220 DeoR-like helix-turn-helix domain CEQ50_15930 PF00455 DeoR C terminal sensor domain CEQ50_15935 PF03608 PTS system enzyme II sorbitol-specific factor CEQ50_15940 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CEQ50_15940 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CEQ50_15945 PF03829 PTS system glucitol/sorbitol-specific IIA component CEQ50_15960 PF07549 SecD/SecF GG Motif CEQ50_15960 PF02355 Protein export membrane protein CEQ50_15960 PF13721 SecD export protein N-terminal TM region CEQ50_15965 PF07549 SecD/SecF GG Motif CEQ50_15965 PF02355 Protein export membrane protein CEQ50_15975 PF03264 NapC/NirT cytochrome c family, N-terminal region CEQ50_15980 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEQ50_15985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEQ50_15985 PF00384 Molybdopterin oxidoreductase CEQ50_15985 PF01568 Molydopterin dinucleotide binding domain CEQ50_15995 PF12838 4Fe-4S dicluster domain CEQ50_15995 PF13187 4Fe-4S dicluster domain CEQ50_16000 PF00672 HAMP domain CEQ50_16000 PF07730 Histidine kinase CEQ50_16000 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEQ50_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_16005 PF00072 Response regulator receiver domain CEQ50_16005 PF00196 Bacterial regulatory proteins, luxR family CEQ50_16010 PF03606 C4-dicarboxylate anaerobic carrier CEQ50_16035 PF12849 PBP superfamily domain CEQ50_16045 PF08206 Ribonuclease B OB domain CEQ50_16045 PF00773 RNB domain CEQ50_16045 PF00575 S1 RNA binding domain CEQ50_16050 PF00270 DEAD/DEAH box helicase CEQ50_16050 PF03880 DbpA RNA binding domain CEQ50_16050 PF00271 Helicase conserved C-terminal domain CEQ50_16055 PF03129 Anticodon binding domain CEQ50_16055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEQ50_16055 PF02824 TGS domain CEQ50_16055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEQ50_16060 PF00707 Translation initiation factor IF-3, C-terminal domain CEQ50_16060 PF05198 Translation initiation factor IF-3, N-terminal domain CEQ50_16065 PF01632 Ribosomal protein L35 CEQ50_16070 PF00453 Ribosomal protein L20 CEQ50_16075 PF00589 Phage integrase family CEQ50_16075 PF13495 Phage integrase, N-terminal SAM-like domain CEQ50_16115 PF00672 HAMP domain CEQ50_16115 PF18698 Histidine kinase sensor domain CEQ50_16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_16115 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_16130 PF13344 Haloacid dehalogenase-like hydrolase CEQ50_16130 PF00293 NUDIX domain CEQ50_16175 PF04229 GrpB protein CEQ50_16200 PF02567 Phenazine biosynthesis-like protein CEQ50_16230 PF01209 ubiE/COQ5 methyltransferase family CEQ50_16280 PF03050 Transposase IS66 family CEQ50_16280 PF13817 IS66 C-terminal element CEQ50_16280 PF13007 Transposase C of IS166 homeodomain CEQ50_16280 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_16360 PF00857 Isochorismatase family CEQ50_16445 PF07517 SecA DEAD-like domain CEQ50_16445 PF01043 SecA preprotein cross-linking domain CEQ50_16445 PF07516 SecA Wing and Scaffold domain CEQ50_16445 PF02810 SEC-C motif CEQ50_16470 PF00106 short chain dehydrogenase CEQ50_16475 PF01810 LysE type translocator CEQ50_16645 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CEQ50_16680 PF00561 alpha/beta hydrolase fold CEQ50_16705 PF12464 Maltose acetyltransferase CEQ50_16705 PF14602 Hexapeptide repeat of succinyl-transferase CEQ50_16870 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_16915 PF01327 Polypeptide deformylase CEQ50_16935 PF01965 DJ-1/PfpI family CEQ50_16935 PF12833 Helix-turn-helix domain CEQ50_16995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ50_17005 PF00849 RNA pseudouridylate synthase CEQ50_17005 PF01479 S4 domain CEQ50_17020 PF14602 Hexapeptide repeat of succinyl-transferase CEQ50_17020 PF12464 Maltose acetyltransferase CEQ50_17050 PF00561 alpha/beta hydrolase fold CEQ50_17065 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CEQ50_17080 PF13614 AAA domain CEQ50_17100 PF08212 Lipocalin-like domain CEQ50_17115 PF13007 Transposase C of IS166 homeodomain CEQ50_17115 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_17115 PF03050 Transposase IS66 family CEQ50_17115 PF13817 IS66 C-terminal element CEQ50_17170 PF07517 SecA DEAD-like domain CEQ50_17170 PF07516 SecA Wing and Scaffold domain CEQ50_17170 PF01043 SecA preprotein cross-linking domain CEQ50_17170 PF02810 SEC-C motif CEQ50_17215 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_17230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ50_17240 PF01209 ubiE/COQ5 methyltransferase family CEQ50_17275 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CEQ50_17365 PF13302 Acetyltransferase (GNAT) domain CEQ50_17375 PF14602 Hexapeptide repeat of succinyl-transferase CEQ50_17375 PF12464 Maltose acetyltransferase CEQ50_17390 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CEQ50_17560 PF02303 Helix-destabilising protein CEQ50_17595 PF01253 Translation initiation factor SUI1 CEQ50_17610 PF01820 D-ala D-ala ligase N-terminus CEQ50_17610 PF07478 D-ala D-ala ligase C-terminus CEQ50_17620 PF13607 Succinyl-CoA ligase like flavodoxin domain CEQ50_17620 PF13380 CoA binding domain CEQ50_17620 PF00583 Acetyltransferase (GNAT) family CEQ50_17625 PF03466 LysR substrate binding domain CEQ50_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_17645 PF03701 Uncharacterised protein family (UPF0181) CEQ50_17660 PF00072 Response regulator receiver domain CEQ50_17660 PF00486 Transcriptional regulatory protein, C terminal CEQ50_17670 PF02233 NAD(P) transhydrogenase beta subunit CEQ50_17675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEQ50_17675 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEQ50_17675 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEQ50_17690 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_17695 PF00313 'Cold-shock' DNA-binding domain CEQ50_17705 PF00672 HAMP domain CEQ50_17705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_17705 PF17200 Single Cache domain 2 CEQ50_17725 PF02798 Glutathione S-transferase, N-terminal domain CEQ50_17725 PF00043 Glutathione S-transferase, C-terminal domain CEQ50_17740 PF03479 Plants and Prokaryotes Conserved (PCC) domain CEQ50_17740 PF12804 MobA-like NTP transferase domain CEQ50_17740 PF00132 Bacterial transferase hexapeptide (six repeats) CEQ50_17745 PF12848 ABC transporter CEQ50_17745 PF00005 ABC transporter CEQ50_17750 PF12793 Sugar transport-related sRNA regulator N-term CEQ50_17750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ50_17760 PF03061 Thioesterase superfamily CEQ50_17770 PF03831 PhnA domain CEQ50_17770 PF08274 PhnA Zinc-Ribbon CEQ50_17780 PF03741 Integral membrane protein TerC family CEQ50_17785 PF00149 Calcineurin-like phosphoesterase CEQ50_17785 PF02872 5'-nucleotidase, C-terminal domain CEQ50_17790 PF11398 Protein of unknown function (DUF2813) CEQ50_17795 PF06496 Protein of unknown function (DUF1097) CEQ50_17800 PF03466 LysR substrate binding domain CEQ50_17800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_17805 PF01226 Formate/nitrite transporter CEQ50_17815 PF00854 POT family CEQ50_17825 PF07702 UTRA domain CEQ50_17825 PF00392 Bacterial regulatory proteins, gntR family CEQ50_17830 PF01272 Transcription elongation factor, GreA/GreB, C-term CEQ50_17830 PF14760 Rnk N-terminus CEQ50_17835 PF13419 Haloacid dehalogenase-like hydrolase CEQ50_17850 PF11953 Domain of unknown function (DUF3470) CEQ50_17850 PF00037 4Fe-4S binding domain CEQ50_17855 PF00588 SpoU rRNA Methylase family CEQ50_17855 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEQ50_17860 PF01268 Formate--tetrahydrofolate ligase CEQ50_17865 PF01641 SelR domain CEQ50_17865 PF01625 Peptide methionine sulfoxide reductase CEQ50_17870 PF01227 GTP cyclohydrolase I CEQ50_17875 PF03453 MoeA N-terminal region (domain I and II) CEQ50_17875 PF00994 Probable molybdopterin binding domain CEQ50_17875 PF03454 MoeA C-terminal region (domain IV) CEQ50_17880 PF00899 ThiF family CEQ50_17885 PF00581 Rhodanese-like domain CEQ50_17890 PF08329 Chitinase A, N-terminal domain CEQ50_17890 PF00704 Glycosyl hydrolases family 18 CEQ50_17900 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEQ50_17905 PF02779 Transketolase, pyrimidine binding domain CEQ50_17905 PF02780 Transketolase, C-terminal domain CEQ50_17905 PF00456 Transketolase, thiamine diphosphate binding domain CEQ50_17920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEQ50_17920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEQ50_17925 PF13419 Haloacid dehalogenase-like hydrolase CEQ50_17930 PF12729 Four helix bundle sensory module for signal transduction CEQ50_17930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_17930 PF00672 HAMP domain CEQ50_17935 PF04264 YceI-like domain CEQ50_17940 PF01292 Prokaryotic cytochrome b561 CEQ50_17950 PF00360 Phytochrome region CEQ50_17950 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_17950 PF00563 EAL domain CEQ50_17950 PF01590 GAF domain CEQ50_17955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEQ50_17955 PF00005 ABC transporter CEQ50_17960 PF12911 N-terminal TM domain of oligopeptide transport permease C CEQ50_17960 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_17965 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_17970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEQ50_17985 PF08443 RimK-like ATP-grasp domain CEQ50_17985 PF18030 RimK PreATP-grasp domain CEQ50_17990 PF00155 Aminotransferase class I and II CEQ50_18000 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEQ50_18000 PF03477 ATP cone domain CEQ50_18005 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18005 PF17158 Membrane-associated sensor, integral membrane domain CEQ50_18010 PF00873 AcrB/AcrD/AcrF family CEQ50_18015 PF00529 HlyD membrane-fusion protein of T1SS CEQ50_18015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEQ50_18025 PF04143 Sulphur transport CEQ50_18040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_18040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEQ50_18045 PF02954 Bacterial regulatory protein, Fis family CEQ50_18045 PF00072 Response regulator receiver domain CEQ50_18045 PF00158 Sigma-54 interaction domain CEQ50_18050 PF03707 Bacterial signalling protein N terminal repeat CEQ50_18050 PF00563 EAL domain CEQ50_18050 PF13188 PAS domain CEQ50_18050 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18055 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_18055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18060 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_18060 PF00989 PAS fold CEQ50_18070 PF00072 Response regulator receiver domain CEQ50_18085 PF01590 GAF domain CEQ50_18085 PF00563 EAL domain CEQ50_18085 PF00360 Phytochrome region CEQ50_18085 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18095 PF00005 ABC transporter CEQ50_18095 PF03459 TOBE domain CEQ50_18100 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_18110 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEQ50_18110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEQ50_18115 PF04076 Bacterial OB fold (BOF) protein CEQ50_18125 PF05231 MASE1 CEQ50_18125 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18125 PF08448 PAS fold CEQ50_18125 PF08447 PAS fold CEQ50_18125 PF00563 EAL domain CEQ50_18125 PF13426 PAS domain CEQ50_18130 PF00483 Nucleotidyl transferase CEQ50_18135 PF06483 Chitinase C CEQ50_18135 PF00704 Glycosyl hydrolases family 18 CEQ50_18140 PF06719 AraC-type transcriptional regulator N-terminus CEQ50_18140 PF12833 Helix-turn-helix domain CEQ50_18145 PF00465 Iron-containing alcohol dehydrogenase CEQ50_18150 PF02954 Bacterial regulatory protein, Fis family CEQ50_18150 PF00072 Response regulator receiver domain CEQ50_18150 PF14532 Sigma-54 interaction domain CEQ50_18155 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_18155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18155 PF00672 HAMP domain CEQ50_18170 PF07690 Major Facilitator Superfamily CEQ50_18175 PF00224 Pyruvate kinase, barrel domain CEQ50_18175 PF02887 Pyruvate kinase, alpha/beta domain CEQ50_18180 PF01627 Hpt domain CEQ50_18180 PF00672 HAMP domain CEQ50_18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18180 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_18180 PF00072 Response regulator receiver domain CEQ50_18185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEQ50_18190 PF02142 MGS-like domain CEQ50_18195 PF12462 DNA helicase IV / RNA helicase N terminal CEQ50_18195 PF13361 UvrD-like helicase C-terminal domain CEQ50_18195 PF00580 UvrD/REP helicase N-terminal domain CEQ50_18200 PF12805 FUSC-like inner membrane protein yccS CEQ50_18220 PF01266 FAD dependent oxidoreductase CEQ50_18220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEQ50_18230 PF00512 His Kinase A (phospho-acceptor) domain CEQ50_18230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18230 PF09308 LuxQ, periplasmic CEQ50_18230 PF00072 Response regulator receiver domain CEQ50_18235 PF13407 Periplasmic binding protein domain CEQ50_18245 PF01541 GIY-YIG catalytic domain CEQ50_18260 PF04363 Protein of unknown function (DUF496) CEQ50_18270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEQ50_18270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEQ50_18275 PF00230 Major intrinsic protein CEQ50_18280 PF01266 FAD dependent oxidoreductase CEQ50_18280 PF04324 BFD-like [2Fe-2S] binding domain CEQ50_18285 PF00890 FAD binding domain CEQ50_18290 PF13183 4Fe-4S dicluster domain CEQ50_18290 PF02754 Cysteine-rich domain CEQ50_18295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEQ50_18295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEQ50_18300 PF00085 Thioredoxin CEQ50_18305 PF07690 Major Facilitator Superfamily CEQ50_18310 PF11756 Nitrous oxide-stimulated promoter CEQ50_18320 PF01513 ATP-NAD kinase CEQ50_18325 PF10414 Sirohaem synthase dimerisation region CEQ50_18325 PF14824 Sirohaem biosynthesis protein central CEQ50_18325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEQ50_18335 PF13806 Rieske-like [2Fe-2S] domain CEQ50_18340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEQ50_18340 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEQ50_18340 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEQ50_18340 PF04324 BFD-like [2Fe-2S] binding domain CEQ50_18340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEQ50_18345 PF01609 Transposase DDE domain CEQ50_18345 PF14706 Transposase DNA-binding CEQ50_18345 PF02281 Transposase Tn5 dimerisation domain CEQ50_18360 PF13005 zinc-finger binding domain of transposase IS66 CEQ50_18360 PF13007 Transposase C of IS166 homeodomain CEQ50_18360 PF13817 IS66 C-terminal element CEQ50_18360 PF03050 Transposase IS66 family CEQ50_18380 PF13977 BetI-type transcriptional repressor, C-terminal CEQ50_18380 PF00440 Bacterial regulatory proteins, tetR family CEQ50_18385 PF00171 Aldehyde dehydrogenase family CEQ50_18390 PF05199 GMC oxidoreductase CEQ50_18390 PF00732 GMC oxidoreductase CEQ50_18395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEQ50_18400 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_18405 PF00005 ABC transporter CEQ50_18405 PF00571 CBS domain CEQ50_18420 PF05762 VWA domain containing CoxE-like protein CEQ50_18425 PF12592 Protein of unknown function (DUF3763) CEQ50_18425 PF17868 AAA lid domain CEQ50_18425 PF07728 AAA domain (dynein-related subfamily) CEQ50_18435 PF01212 Beta-eliminating lyase CEQ50_18445 PF00270 DEAD/DEAH box helicase CEQ50_18445 PF00271 Helicase conserved C-terminal domain CEQ50_18450 PF03222 Tryptophan/tyrosine permease family CEQ50_18455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_18455 PF00672 HAMP domain CEQ50_18460 PF16363 GDP-mannose 4,6 dehydratase CEQ50_18465 PF03746 LamB/YcsF family CEQ50_18475 PF02626 Carboxyltransferase domain, subdomain A and B CEQ50_18490 PF00005 ABC transporter CEQ50_18495 PF13472 GDSL-like Lipase/Acylhydrolase family CEQ50_18500 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEQ50_18500 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEQ50_18500 PF07055 Enoyl reductase FAD binding domain CEQ50_18505 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18505 PF00563 EAL domain CEQ50_18505 PF00498 FHA domain CEQ50_18515 PF00684 DnaJ central domain CEQ50_18515 PF01556 DnaJ C terminal domain CEQ50_18515 PF00226 DnaJ domain CEQ50_18530 PF13419 Haloacid dehalogenase-like hydrolase CEQ50_18535 PF11849 Domain of unknown function (DUF3369) CEQ50_18550 PF00294 pfkB family carbohydrate kinase CEQ50_18555 PF03707 Bacterial signalling protein N terminal repeat CEQ50_18555 PF13188 PAS domain CEQ50_18555 PF00563 EAL domain CEQ50_18555 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18560 PF00194 Eukaryotic-type carbonic anhydrase CEQ50_18570 PF00672 HAMP domain CEQ50_18570 PF02743 Cache domain CEQ50_18570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_18575 PF00491 Arginase family CEQ50_18580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEQ50_18580 PF17944 Arginine decarboxylase C-terminal helical extension CEQ50_18580 PF17810 Arginine decarboxylase helical bundle domain CEQ50_18590 PF00005 ABC transporter CEQ50_18590 PF00571 CBS domain CEQ50_18595 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_18600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEQ50_18620 PF00696 Amino acid kinase family CEQ50_18620 PF13840 ACT domain CEQ50_18625 PF06339 Ectoine synthase CEQ50_18630 PF00202 Aminotransferase class-III CEQ50_18635 PF00583 Acetyltransferase (GNAT) family CEQ50_18645 PF01467 Cytidylyltransferase-like CEQ50_18650 PF02540 NAD synthase CEQ50_18680 PF02743 Cache domain CEQ50_18680 PF00672 HAMP domain CEQ50_18680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_18685 PF00128 Alpha amylase, catalytic domain CEQ50_18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_18700 PF00672 HAMP domain CEQ50_18700 PF02743 Cache domain CEQ50_18705 PF17863 AAA lid domain CEQ50_18705 PF07726 ATPase family associated with various cellular activities (AAA) CEQ50_18710 PF01882 Protein of unknown function DUF58 CEQ50_18725 PF13519 von Willebrand factor type A domain CEQ50_18740 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_18750 PF01844 HNH endonuclease CEQ50_18755 PF12843 Putative quorum-sensing-regulated virulence factor CEQ50_18760 PF00884 Sulfatase CEQ50_18770 PF01219 Prokaryotic diacylglycerol kinase CEQ50_18775 PF00107 Zinc-binding dehydrogenase CEQ50_18775 PF08240 Alcohol dehydrogenase GroES-like domain CEQ50_18780 PF00155 Aminotransferase class I and II CEQ50_18785 PF03466 LysR substrate binding domain CEQ50_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_18790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEQ50_18800 PF07690 Major Facilitator Superfamily CEQ50_18805 PF00196 Bacterial regulatory proteins, luxR family CEQ50_18805 PF00072 Response regulator receiver domain CEQ50_18810 PF05231 MASE1 CEQ50_18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18810 PF07730 Histidine kinase CEQ50_18815 PF07690 Major Facilitator Superfamily CEQ50_18830 PF01966 HD domain CEQ50_18830 PF11871 Domain of unknown function (DUF3391) CEQ50_18835 PF04013 Putative SAM-dependent RNA methyltransferase CEQ50_18850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ50_18850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEQ50_18855 PF01022 Bacterial regulatory protein, arsR family CEQ50_18860 PF01758 Sodium Bile acid symporter family CEQ50_18865 PF01022 Bacterial regulatory protein, arsR family CEQ50_18870 PF01740 STAS domain CEQ50_18870 PF00916 Sulfate permease family CEQ50_18875 PF00582 Universal stress protein family CEQ50_18880 PF17327 Acyl homoserine lactone synthase CEQ50_18885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_18885 PF00072 Response regulator receiver domain CEQ50_18895 PF12833 Helix-turn-helix domain CEQ50_18900 PF02311 AraC-like ligand binding domain CEQ50_18900 PF12833 Helix-turn-helix domain CEQ50_18905 PF07715 TonB-dependent Receptor Plug Domain CEQ50_18905 PF00593 TonB dependent receptor CEQ50_18910 PF07690 Major Facilitator Superfamily CEQ50_18915 PF00668 Condensation domain CEQ50_18915 PF00501 AMP-binding enzyme CEQ50_18915 PF00550 Phosphopantetheine attachment site CEQ50_18915 PF08242 Methyltransferase domain CEQ50_18920 PF00501 AMP-binding enzyme CEQ50_18920 PF00668 Condensation domain CEQ50_18920 PF13193 AMP-binding enzyme C-terminal domain CEQ50_18920 PF00550 Phosphopantetheine attachment site CEQ50_18935 PF00425 chorismate binding enzyme CEQ50_18940 PF13193 AMP-binding enzyme C-terminal domain CEQ50_18940 PF00501 AMP-binding enzyme CEQ50_18945 PF00005 ABC transporter CEQ50_18945 PF00664 ABC transporter transmembrane region CEQ50_18950 PF00664 ABC transporter transmembrane region CEQ50_18950 PF00005 ABC transporter CEQ50_18955 PF00478 IMP dehydrogenase / GMP reductase domain CEQ50_18960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEQ50_18960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEQ50_18985 PF00313 'Cold-shock' DNA-binding domain CEQ50_18990 PF07152 YaeQ protein CEQ50_18995 PF00175 Oxidoreductase NAD-binding domain CEQ50_18995 PF00042 Globin CEQ50_18995 PF00970 Oxidoreductase FAD-binding domain CEQ50_19000 PF00158 Sigma-54 interaction domain CEQ50_19000 PF01590 GAF domain CEQ50_19015 PF01773 Na+ dependent nucleoside transporter N-terminus CEQ50_19015 PF07662 Na+ dependent nucleoside transporter C-terminus CEQ50_19015 PF07670 Nucleoside recognition CEQ50_19020 PF00111 2Fe-2S iron-sulfur cluster binding domain CEQ50_19020 PF03473 MOSC domain CEQ50_19020 PF03476 MOSC N-terminal beta barrel domain CEQ50_19030 PF01609 Transposase DDE domain CEQ50_19030 PF13006 Insertion element 4 transposase N-terminal CEQ50_19035 PF05958 tRNA (Uracil-5-)-methyltransferase CEQ50_19040 PF05661 Protein of unknown function (DUF808) CEQ50_19065 PF17151 Periplasmic sensor domain CEQ50_19065 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19070 PF08220 DeoR-like helix-turn-helix domain CEQ50_19070 PF00455 DeoR C terminal sensor domain CEQ50_19075 PF03472 Autoinducer binding domain CEQ50_19075 PF00196 Bacterial regulatory proteins, luxR family CEQ50_19080 PF00765 Autoinducer synthase CEQ50_19095 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19100 PF14785 Maltose transport system permease protein MalF P2 domain CEQ50_19100 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19105 PF01547 Bacterial extracellular solute-binding protein CEQ50_19115 PF00005 ABC transporter CEQ50_19115 PF08402 TOBE domain CEQ50_19120 PF00196 Bacterial regulatory proteins, luxR family CEQ50_19130 PF01584 CheW-like domain CEQ50_19130 PF00072 Response regulator receiver domain CEQ50_19135 PF04237 YjbR CEQ50_19140 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19155 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19155 PF00563 EAL domain CEQ50_19155 PF03707 Bacterial signalling protein N terminal repeat CEQ50_19170 PF03466 LysR substrate binding domain CEQ50_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19175 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19175 PF00563 EAL domain CEQ50_19185 PF05726 Pirin C-terminal cupin domain CEQ50_19185 PF02678 Pirin CEQ50_19195 PF06865 Pyrimidine/purine nucleoside phosphorylase CEQ50_19205 PF00793 DAHP synthetase I family CEQ50_19210 PF00005 ABC transporter CEQ50_19215 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19220 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEQ50_19225 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEQ50_19230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEQ50_19230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEQ50_19230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEQ50_19250 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEQ50_19260 PF00892 EamA-like transporter family CEQ50_19265 PF00462 Glutaredoxin CEQ50_19280 PF07690 Major Facilitator Superfamily CEQ50_19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19285 PF03466 LysR substrate binding domain CEQ50_19290 PF08448 PAS fold CEQ50_19290 PF08447 PAS fold CEQ50_19290 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19290 PF00563 EAL domain CEQ50_19295 PF01476 LysM domain CEQ50_19295 PF08525 Opacity-associated protein A N-terminal motif CEQ50_19295 PF01551 Peptidase family M23 CEQ50_19305 PF00916 Sulfate permease family CEQ50_19305 PF01740 STAS domain CEQ50_19320 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19320 PF07694 5TMR of 5TMR-LYT CEQ50_19325 PF00005 ABC transporter CEQ50_19330 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19335 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19340 PF12849 PBP superfamily domain CEQ50_19350 PF00155 Aminotransferase class I and II CEQ50_19350 PF00392 Bacterial regulatory proteins, gntR family CEQ50_19355 PF13302 Acetyltransferase (GNAT) domain CEQ50_19370 PF14863 Alkyl sulfatase dimerisation CEQ50_19370 PF14864 Alkyl sulfatase C-terminal CEQ50_19370 PF00753 Metallo-beta-lactamase superfamily CEQ50_19375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19375 PF03466 LysR substrate binding domain CEQ50_19380 PF01906 Putative heavy-metal-binding CEQ50_19390 PF03922 OmpW family CEQ50_19400 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CEQ50_19400 PF18416 N-acetylglucosamine binding protein domain 2 CEQ50_19405 PF07690 Major Facilitator Superfamily CEQ50_19410 PF03009 Glycerophosphoryl diester phosphodiesterase family CEQ50_19415 PF03466 LysR substrate binding domain CEQ50_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19420 PF03306 Alpha-acetolactate decarboxylase CEQ50_19425 PF00205 Thiamine pyrophosphate enzyme, central domain CEQ50_19425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEQ50_19425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEQ50_19450 PF03466 LysR substrate binding domain CEQ50_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19455 PF02652 L-lactate permease CEQ50_19460 PF01070 FMN-dependent dehydrogenase CEQ50_19475 PF01161 Phosphatidylethanolamine-binding protein CEQ50_19490 PF01545 Cation efflux family CEQ50_19495 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CEQ50_19505 PF03372 Endonuclease/Exonuclease/phosphatase family CEQ50_19520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19520 PF00672 HAMP domain CEQ50_19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19540 PF03466 LysR substrate binding domain CEQ50_19550 PF00356 Bacterial regulatory proteins, lacI family CEQ50_19555 PF00933 Glycosyl hydrolase family 3 N terminal domain CEQ50_19555 PF01915 Glycosyl hydrolase family 3 C-terminal domain CEQ50_19555 PF14310 Fibronectin type III-like domain CEQ50_19560 PF17912 MalK OB fold domain CEQ50_19560 PF00005 ABC transporter CEQ50_19565 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19570 PF00528 Binding-protein-dependent transport system inner membrane component CEQ50_19580 PF00356 Bacterial regulatory proteins, lacI family CEQ50_19585 PF02264 LamB porin CEQ50_19590 PF01554 MatE CEQ50_19605 PF07690 Major Facilitator Superfamily CEQ50_19610 PF00672 HAMP domain CEQ50_19610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19615 PF05362 Lon protease (S16) C-terminal proteolytic domain CEQ50_19615 PF13654 AAA domain CEQ50_19625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CEQ50_19625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CEQ50_19630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEQ50_19635 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CEQ50_19635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEQ50_19640 PF03466 LysR substrate binding domain CEQ50_19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEQ50_19655 PF00356 Bacterial regulatory proteins, lacI family CEQ50_19660 PF00294 pfkB family carbohydrate kinase CEQ50_19665 PF13407 Periplasmic binding protein domain CEQ50_19670 PF02653 Branched-chain amino acid transport system / permease component CEQ50_19675 PF00005 ABC transporter CEQ50_19680 PF05025 RbsD / FucU transport protein family CEQ50_19695 PF04717 Type VI secretion system, phage-baseplate injector CEQ50_19695 PF16671 Actin cross-linking domain CEQ50_19700 PF05638 Type VI secretion system effector, Hcp CEQ50_19705 PF00128 Alpha amylase, catalytic domain CEQ50_19705 PF02806 Alpha amylase, C-terminal all-beta domain CEQ50_19705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEQ50_19710 PF02446 4-alpha-glucanotransferase CEQ50_19715 PF00343 Carbohydrate phosphorylase CEQ50_19720 PF00196 Bacterial regulatory proteins, luxR family CEQ50_19720 PF17874 MalT-like TPR region CEQ50_19725 PF10928 Protein of unknown function (DUF2810) CEQ50_19730 PF00672 HAMP domain CEQ50_19730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19730 PF17200 Single Cache domain 2 CEQ50_19740 PF02743 Cache domain CEQ50_19740 PF00672 HAMP domain CEQ50_19740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEQ50_19755 PF00171 Aldehyde dehydrogenase family CEQ50_19760 PF01037 Lrp/AsnC ligand binding domain CEQ50_19765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19765 PF00672 HAMP domain CEQ50_19765 PF17200 Single Cache domain 2 CEQ50_19775 PF00474 Sodium:solute symporter family CEQ50_19785 PF14850 DNA-binding domain of Proline dehydrogenase CEQ50_19785 PF00171 Aldehyde dehydrogenase family CEQ50_19785 PF01619 Proline dehydrogenase CEQ50_19785 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CEQ50_19790 PF12833 Helix-turn-helix domain CEQ50_19800 PF03781 Sulfatase-modifying factor enzyme 1 CEQ50_19810 PF01243 Pyridoxamine 5'-phosphate oxidase CEQ50_19810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CEQ50_19815 PF00529 HlyD membrane-fusion protein of T1SS CEQ50_19830 PF00664 ABC transporter transmembrane region CEQ50_19830 PF00005 ABC transporter CEQ50_19830 PF03412 Peptidase C39 family CEQ50_19840 PF00072 Response regulator receiver domain CEQ50_19840 PF00990 Diguanylate cyclase, GGDEF domain CEQ50_19850 PF02743 Cache domain CEQ50_19850 PF00672 HAMP domain CEQ50_19850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19855 PF01339 CheB methylesterase CEQ50_19855 PF00072 Response regulator receiver domain CEQ50_19860 PF03975 CheD chemotactic sensory transduction CEQ50_19865 PF01739 CheR methyltransferase, SAM binding domain CEQ50_19865 PF03705 CheR methyltransferase, all-alpha domain CEQ50_19870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEQ50_19870 PF00672 HAMP domain CEQ50_19870 PF02203 Tar ligand binding domain homologue CEQ50_19875 PF01584 CheW-like domain CEQ50_19880 PF01584 CheW-like domain CEQ50_19885 PF09078 CheY binding CEQ50_19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEQ50_19885 PF01584 CheW-like domain CEQ50_19885 PF01627 Hpt domain CEQ50_19885 PF02895 Signal transducing histidine kinase, homodimeric domain CEQ50_19890 PF00072 Response regulator receiver domain CEQ50_19900 PF05127 Helicase CEQ50_19900 PF13718 GNAT acetyltransferase 2 CEQ50_19905 PF13416 Bacterial extracellular solute-binding protein CEQ50_19910 PF02195 ParB-like nuclease domain CEQ50_19910 PF08775 ParB family CEQ50_19915 PF13614 AAA domain CEQ50_19915 PF18607 ParA helix turn helix domain